LOCUS       DASFQS010000001        75066 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.001, whole genome shotgun sequence.
ACCESSION   DASFQS010000001 DASFQS010000000
VERSION     DASFQS010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 75066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 75066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..75066
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.001"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(38..910)
                     /gene="sdaAA"
                     /locus_tag="U1041_000001"
     CDS             complement(38..910)
                     /gene="sdaAA"
                     /locus_tag="U1041_000001"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HEM4767154.1"
                     /translation="MFYTIKELVQQAEQFSGNVAELMIATEIELTGRSREEILTIMSR
                     NLTVMKASIVDGLTESKSVSGLTGGDAAKLDAYMKSGKTLSDSAVLSAARNAMAVNEL
                     NAKMGLVCATPTAGSAGCLPAVLGVAIDKLNLTEEQQLDFLFTAGAFGLVIANNASIS
                     GAEGGCQAEVGSASAMSAAALTLAAGGTPNQASQAICFVIKNMLGLICDPVAGLVEVP
                     CVKRNAMGASYAMVAADMALAGIKSKIPADEVINAMYQVGAALPTAFRETAEGGLAAT
                     PTGRRLAQEIFGED"
     gene            complement(923..1594)
                     /gene="sdaAB"
                     /locus_tag="U1041_000002"
     CDS             complement(923..1594)
                     /gene="sdaAB"
                     /locus_tag="U1041_000002"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HEM4767155.1"
                     /translation="MTNLKFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFGDEPT
                     EVEFQLYNSFAKTYRGHGTDVALVAGILGMDTDDPRIPDSLDIARERGIKVYWRVNKD
                     SNTPHPNTTRIIIKNDKKSISATGVSIGGGNIQVTELNGFSVNLNMNTPTIIIVHQDV
                     PGMIAKVTDVLSKYDINIAQMNVTREQAGEKAIMIIEVDARQCENSIAEIEKIPHLHN
                     VTFFN"
     gene            1809..2933
                     /gene="mnmA"
                     /locus_tag="U1041_000003"
     CDS             1809..2933
                     /gene="mnmA"
                     /locus_tag="U1041_000003"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEM4767156.1"
                     /translation="MSIDNSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDD
                     TDENGFCTATEDYKDVAAVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDV
                     MCNKEIKFKAFLDYAMNLGADYVATGHYAQISRDEDGTVHMLRGADNGKDQTYFLSQL
                     SQEQLQKTMFPLGHLQKPQVREIAERAGLATAKKKDSTGICFIGEKNFKEFLGQYLPA
                     QPGRMMTVDGRDMGEHTGLMYYTIGQRGGLGIGGQIGGDNEPWFVVGKDLLKNILYVG
                     QGFYHESLMSTSLQASQVHFTRDMPEEFTLECTAKFRYRQPDSQVTVKVKGDKAEVIF
                     AEPQRAITPGQAVVFYDGQECLGGGMIDMAYKDGVACQYI"
     gene            complement(2976..3365)
                     /locus_tag="U1041_000004"
     CDS             complement(2976..3365)
                     /locus_tag="U1041_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000106206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM4767157.1"
                     /translation="MSTNLEIFNAYNNALIAGDFAALFETMANDIIWHQPGNHSTSGA
                     KIGKEVLGAHLATFAEKTNGTFKVVTNWVSDNDTLVAANVTFLGTRTDGEELNMNGID
                     LFRMEDGKIKEVWLFSADQKAEDAFWG"
     gene            3491..3817
                     /locus_tag="U1041_000005"
     CDS             3491..3817
                     /locus_tag="U1041_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767158.1"
                     /translation="MKKVSEYGICPFATTQKVLTGKWGLVIIYQLSTGTKRFNELQRL
                     IPGITQTMLTRHLRQLEEDRIISRTVYAEVPPRVEYSLTEMGEKFRSVLDAVEAWGLE
                     YIETLA"
     gene            4147..4779
                     /locus_tag="U1041_000006"
     CDS             4147..4779
                     /locus_tag="U1041_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012962642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HEM4767159.1"
                     /translation="MRVVVIQASTRTEINQLLFDTVCEVVDGHHDVVNLGVFPEEIEN
                     YTYMEVAVMISLLIETNAADFVVTGCSSGQGMMMACNSLPGLRCGFVQTPQDAYLFGR
                     INNGNVVSLPLGLNFGWSGELNLRYTLEKLFEGEFNTGYPVQDAERKKKEATELVHLH
                     QLTTRSFLEILPNFNEYLLTKILRRKTFVDYIYQNGTNKLLLEKLTAYKV"
     gene            4909..5361
                     /locus_tag="U1041_000007"
     CDS             4909..5361
                     /locus_tag="U1041_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM4767160.1"
                     /translation="MDFRTRHDNQIFGVRATGLVVQDEKLYLVKSPEGKYYTLGGAIQ
                     LGETTEEAVQREIQEEIGIEVEVGPLAFIVENQFTLQEKSYHQIEFLYIVTPLSNPAT
                     NLEEGNSVRQCEWVTFADLEKLDLNPDFLKTELANWDGQLKHFMNKDN"
     gene            5378..5821
                     /locus_tag="U1041_000008"
     CDS             5378..5821
                     /locus_tag="U1041_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM4767161.1"
                     /translation="MPVKLIAHVLLTVADSHLIIQRLQIKRGKPNVFPQYWDIPGGRV
                     EENELPRDAAVRECFEETGILIEKENLTIIHEDSQFDEEKQTVFTRLVYEGTLTEQVK
                     TILLDPEEHTDFLWLAPSDKNKKNLVPYLDEILEKRGMNGFQNQS"
     gene            5799..6260
                     /locus_tag="U1041_000009"
     CDS             5799..6260
                     /locus_tag="U1041_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEM4767162.1"
                     /translation="MDFRTKVDNQIFGVRATALLIKDGKIFLTKDSKGRYYTIGGAVE
                     VNEVAADAAVREVKEELGIDSRVNQLAFVVENQFTHEGIDFHNIELHFIVEPIGEMPE
                     KMIEGKLKQTCEWIALDNLVNLDVVPAFLSQALPNWSGQVKHIMNMKEKTT"
     gene            6257..8173
                     /gene="mnmG"
                     /locus_tag="U1041_000010"
     CDS             6257..8173
                     /gene="mnmG"
                     /locus_tag="U1041_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEM4767163.1"
                     /translation="MTHTFAENYDVIVIGAGHAGVEAGLAASRMGCKTLLATINLDMV
                     AFMPCNPSIGGSAKGIVVREIDALGGEMGRNIDKTYIQMKMLNTGKGPAVRALRAQAD
                     KAEYAAEMKRTVERQKNLTLRQTMIDEILVEEGKVIGVRTATNQKFSAKAVVVTTGTA
                     LRGEIIIGDLKYSSGPNNSLASITLADNLKELGLEIGRFKTGTPPRVNARTINYDETE
                     IQPGDEKPNHFSFLSKDEDYLQDQIPCWLTYTNATSHEIINSNLHRAPMFSGIVKGIG
                     PRYCPSIEDKIVRFADKERHQLFLEPEGRNTDEIYVQGLSTSLPEDVQQDLIHSIKGL
                     ENAQMMRTGYAIEYDMVMPHQLRATLETKKISGLFTAGQTNGTSGYEEAAGQGIVAGI
                     NAALKVQGKPELILKRSDGYIGVMIDDLVTKGTVEPYRLLTSRAEYRLILRHDNADMR
                     LTEIGRQVGLVDDERWQVFQIHKNQFDNEMKRLESIKLKPIKETNEKVVAMGFKPLTD
                     ALTAKEFMRRPDVTYADAVAFIGPAAEDLDAKTIELIETEVKYEGYIAKALDQVEKMK
                     RMEEKRIPADIDWDDIDSIATEARQKFKLISPETIGQASRISGVNPADISILMVYLEG
                     RSRSISKNKSKDSH"
     gene            8254..10215
                     /locus_tag="U1041_000011"
     CDS             8254..10215
                     /locus_tag="U1041_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HEM4767164.1"
                     /translation="MKRFRFSTIHFVMIGVILFGLVALVHRFFPIGASTVFALLISLL
                     VLIALFIYQKHSYEFSEIEQIEYLNNQANSGLMMLLDKMPVGVIKVRPDSNQVEWFNP
                     FAELIFAQENGEFDQKKLREIIDVGLDEERIYANFSGKRYAVNVDFDQGLFYFFDASS
                     EYSATNSLIGSRPVIGIISVDNYDELEDTVSDSQISQVNSFLAQFVSEFCHDYGIYYR
                     RGTMDRFYFFTDYAVLEKLIENKFSVIDKFREEAKKLDLGLTLSMGLAYGNENHHQIG
                     QVALQNLNMAEVRGGDQVVVKENDESKQPLFFGGGSASSVKRTRTRTRAMMSAVSDKL
                     KSVDAVFVVGHRNLDMDALGSAVGMQYFAQNIMNNAYTVYNPDEMAPDIARAIKKLSD
                     ENCSNLLTVEEAMKMVTFQSLLIMVDHSKIGLTLDKDFYDQFTQVVVVDHHRRDTDFP
                     NNAVLTYIESGASSASELVTELIQFQNDKHHKLNRIQSSLLMAGVMLDTKNFTSRVTS
                     RTFDVASYLRTRGSDSLEIQQIAATDFEEYRQINELILSGQRIESNVVIACADDTKEY
                     DNIIPSKAANTILDMAGIEAVFVVTRNAKGYVSISARSHSKINVQRIMEEMGGGGHFN
                     LAAAQVYDQTIAEVCEKLTDKIREEINGN"
     gene            10226..10678
                     /gene="rplI"
                     /locus_tag="U1041_000012"
     CDS             10226..10678
                     /gene="rplI"
                     /locus_tag="U1041_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEM4767165.1"
                     /translation="MKVIFLADVKGQGKKGEIKEVPTGYAQNFLIKKNLAKEATNQAI
                     SALRGQEKSKAKAHAEMVAEAEAIKAKLAEEATLVKFVEKVGPDGRTFGSITSKKIAE
                     ELEKQFGIKIDKRHIQLDHPIRALGLIDVPVKIYQDVTGVINLSIKEA"
     gene            10713..12068
                     /gene="dnaB"
                     /locus_tag="U1041_000013"
     CDS             10713..12068
                     /gene="dnaB"
                     /locus_tag="U1041_000013"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEM4767166.1"
                     /translation="MAELDELRVQPQDILAEQSVLGAIFLDEGKLVFVREYIEAEDFF
                     KHAHKLIFKAMIALSDKNEAIDATTMRNYLVNHGDLENIGGLAYLAEIISSVPTAANA
                     EFYAKIVAEKSNLRKLIARLTDAVNQAYEGADGSDDIIANAEKALIDVSEGASRSGFK
                     RIDDVLNINFDNLETRAKQTSDITGIATGYPALDAMTTGLHEEELIILAARPAVGKTA
                     FALNIAQNIGTKLGLTVAIFSLEMGAESLVDRMLASEGVINSRSIRTGHLTQEEWNKY
                     MVAQANLARASIYIDDTPGIKITEIRSRSRKLAQETGNLGLILIDYLQLITGTGRENR
                     QQEVSEISRQLKILAKELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIV
                     AFLYRDDYYERGEQEDGGIPNNTVEVIIEKNRSGARGTVELMFQKEYNKFASISKRED
                     G"
     gene            12072..12323
                     /locus_tag="U1041_000014"
     CDS             12072..12323
                     /locus_tag="U1041_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HEM4767167.1"
                     /translation="MSDAFTDVAKMKQIKQDIKEHEGQIVELTLENGRKREKNKQGRI
                     IEVYQSLFIVEFEDPNNTFVESYTYSDILTEKILIHYLD"
     gene            12463..13158
                     /locus_tag="U1041_000015"
     CDS             12463..13158
                     /locus_tag="U1041_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEM4767168.1"
                     /translation="MDLQWFTFLALFAEGILSFLSPCVLPILPIYVGLLAGGAEGKEG
                     EKKVLVNTLSFVVGIALTFFLLGFASSLLSRVLQANAQFLQIISGLLIVLMGILQLGW
                     FNIPMLEREFSAKNKVYQAGKNVTPFLAFLMGFTFSFSWTPCIGPILASVFIYASSQQ
                     GWLSSILLLVYCLGFILPFILVAFFSQKMLAFFKNNRHYLAWTKRISGYLLLLIGLSI
                     LTGFFQHLVRFFQ"
     gene            13177..13740
                     /locus_tag="U1041_000016"
     CDS             13177..13740
                     /locus_tag="U1041_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEM4767169.1"
                     /translation="MKKLVSIVVCLLVSCFILTACSLLPLVSPSSTESTLQANQPVTL
                     DFSLKDKDGKDVNLADYKGKKIYINVWATWCGPCQREIPELEEVYQEYKDKEDYVFLS
                     ITSPKDAEFANTNPSDVSKDEILEKASELGATYPVLFDTKDQAMTHFGIAAFPTHILI
                     NSDGTLKVSFAGQVQKDKLVELLEEMQ"
     gene            13862..14242
                     /locus_tag="U1041_000017"
     CDS             13862..14242
                     /locus_tag="U1041_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767170.1"
                     /translation="MSNQIEIIMNLDTLEIFEVIDHSQDDLEDIEVVENVITHTEEVQ
                     ISPYDDLGRVWLGNGYYYKPSSLLWRNEREGIIHELRPKNKHGSYPYYQRCRNHTRGH
                     VSQLTYEEALWLTLEFYPELMNYI"
     gene            14368..14706
                     /locus_tag="U1041_000018"
     CDS             14368..14706
                     /locus_tag="U1041_000018"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767171.1"
                     /translation="MSRNIYIARFHSHTAIYSLLFSTNRDAFECTIGVFSSLAQTTEA
                     IQQFVTFSDINRLIEANDLVTITKIEDYMITTIAEKQEEGEHNEDGSVKNCYVESITI
                     EGYKLNEPSF"
     gene            14747..15010
                     /locus_tag="U1041_000019"
     CDS             14747..15010
                     /locus_tag="U1041_000019"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767172.1"
                     /translation="MKVVANQPFLNAFEWDGTEETFEKIKELAANIKDDVYMRDGQLV
                     VYDYTFEEEEVVDVGCYVVFESSRIDVYVPIVFETLYTEVTND"
     gene            15003..15310
                     /locus_tag="U1041_000020"
                     /pseudo
     CDS             15003..15310
                     /locus_tag="U1041_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000969666.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            15370..15531
                     /locus_tag="U1041_000021"
     CDS             15370..15531
                     /locus_tag="U1041_000021"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767173.1"
                     /translation="MTRQEFVKREVAIACLMVYQKLTRVESERNIADMESRRLIRFNP
                     SGQVQFKEI"
     gene            15535..16479
                     /locus_tag="U1041_000022"
     CDS             15535..16479
                     /locus_tag="U1041_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012961378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiator protein A"
                     /protein_id="HEM4767174.1"
                     /translation="MQFDPITASQYETTERYYELPKALFENELYRDMRLDVKVSYAIL
                     KDRLKLSIKNGWIDDDGIYYLIYSNSKLMKILDCSKSTLLRIKKQLAEYGLMREVQQS
                     SSKEGTLANRIYLGNLNISERPTPVSNNESSTPVSNLDQGGVKNRLGGCQIDTGRVSK
                     SAPNEPEYSEPNNSEYSSSRKSETISDEIPPSPQPNFTLTRSQSEKYIPPKYYSLLQT
                     IADRYNGKFCQIDLFTGETQNYHLTHKQKMMIGQYLDNDWVTSQEVLDMIDRVPVDCE
                     CPLAYLLKMLENLKTERQAEVRRVAHLNAQRYYEGGQA"
     gene            16476..17165
                     /locus_tag="U1041_000023"
     CDS             16476..17165
                     /locus_tag="U1041_000023"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767175.1"
                     /translation="MTKEDLRKQFENCVHPTKKIFLTFCLAFGISLSLLTRISRSSDL
                     PKMGILIVISLIISIPFCSKHLRYLYNNLERTLYQLRSEQMAYFEKHAVTTTDVIDDF
                     TMSYTQYDVKLSFSYRDQSQSFTVLRTLIPQPYANQRLVIVAHHLSLPSDRIGDYEER
                     FDLSEFSQTYATFIKRRERNLALFINPYETNQSPYKIISELPATEKQTFELAIINQLD
                     PATNESTTKTK"
     gene            17336..19852
                     /locus_tag="U1041_000024"
     CDS             17336..19852
                     /locus_tag="U1041_000024"
                     /inference="COORDINATES: protein motif:HMM:TIGR04320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HEM4767176.1"
                     /translation="MKQLTVLSALATAVLSTGREVVHAEEVPHTTEPKPIAETSASQQ
                     ATVTETDVATAKAELDKANQTVTAQEEVVNQAQKDVDTAKETVNQAQTELVESAELAE
                     QATPENISKAKASIKNAEATVTETSQNLEDKNQAESDSQQAVKDQKTVVSTAQVDVNE
                     KTQAVTEAEKDVDTAQAILDGTGQAEVIAKADQAEKQLSAKTEALTTAQTDLVTAKQA
                     DKKRQTAIEEADQALVQANNTLETKTQVAKATTEQADETAKQLATAKTIFQEAENDKN
                     SINTITLSSEYITALRDYALNYTEKGAEATAILKALSPALKTSNQFKANANDSQTTYA
                     VNELPAEVRQELSWFASELINQVRQAFGTANVVVTDQALEFADMVTDGYVTDNWSRSD
                     VLTTGHDAKAINKAANQFGLVTTNSVEEADGLQYYENMHNYAYEQKTITLTEAKRKVY
                     ESIVEFMFNNYEWLHAQNIAGLEATGVNYLGVDVSTRTGVTGVHFLTVDPSKLSTRHF
                     GTELVNPNTAQAILSRFEQAEHMLSQATTTNNRAQEAKTKALKEQAESQAQVVTAQAS
                     LTKAQAVPMLTPQAQANVLTAQEAVKKAEAEHKEAQVKMANLQADVKVKQANLAKAKQ
                     TLAQKQAILDKAKEQLSIEQEKLARLQSDLETAHTNIAFAQTQFSTAQSKLKEAQTYL
                     IKLEEAPARLEIAQTRLLQATNSLKAKEAILTEALETLAELKQEEAKALNHYQTVLSA
                     YQAVLEAQRQVELAKQYETIIHEGGQPVPVVDGTGRITGYVSEVPEVPAQTSKPITQT
                     VPTKTTQASLPTTGTKTSSLTVLGLALASLVFFSRKKKEG"
     gene            19860..20084
                     /locus_tag="U1041_000025"
     CDS             19860..20084
                     /locus_tag="U1041_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767177.1"
                     /translation="MTHTAQRIKTLRKQAGLSQQELADNIGVLRETISNWERGASRTN
                     VENIERVATFFQVPVSDLLGIQIPADTVQK"
     gene            20377..20685
                     /locus_tag="U1041_000026"
     CDS             20377..20685
                     /locus_tag="U1041_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767178.1"
                     /translation="MNEIRPDREMTLSDLRKLGGQGNVTAYLLTGEIVTLRSDCGTTP
                     KRAIVDGELKIVEEVIPFHKLYRQIRTVQRDHILIARRERYKNQSILRLTGKGYHRPN
                     "
     gene            20718..21470
                     /locus_tag="U1041_000027"
     CDS             20718..21470
                     /locus_tag="U1041_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003045938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4767179.1"
                     /translation="MLNKKNILSMLTLSALVLSNSVVAFADETTPIDSSAPVEVTQPS
                     TSTEPSTEVPTPVEPSQPVEPTTPTEEPTTPEEPTVPVDPTLPSTEQPKEKIPTQPTE
                     PSTRPDIPTPPTEKPKQDVPQPETPAPPKTAEEAVNNGESQIGTISTETKQPVEAVTP
                     DKPIVTDTGYTIISTDNSQPIIRYADGSTATVSAESIGAVVNKDKTISVKTVDGQMKT
                     LPNTGEANSLLSLLGIFLLGIVGYYRKKKLTS"
     gene            21530..25234
                     /locus_tag="U1041_000028"
     CDS             21530..25234
                     /locus_tag="U1041_000028"
                     /inference="COORDINATES: protein motif:HMM:TIGR03726.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008090088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4767180.1"
                     /translation="MYQKITTVNGHGFFRKSKAYGLVCGIALFGAMVTTSVSAEEIVT
                     ETTPAVEVVNPNPATNLETVQETPSAESLATQAESGQKTGELTSPVTSTELDQIVTDA
                     KEAGVTVTEESKPAVYENLDQAQADLTKQTDVVKEATDKQEANTTAIKEAMDKNAEID
                     RQNKAEAERVAEFNQHGQEAVDQRNAAGQAAVDARNVAGQAAVDARNQKELDDRDAEA
                     ADVEQRNKDGQAAADARNAEGQAQVDSYNQSETARVEALNAELKAEYEEAVAKVAEVE
                     AINAEIRKRNAQAASAAGSTNAQLLAEYEAKKAEMQANTTKDGYLKTVEPQEIVLNHS
                     SDPKVAFSNLSGVTFSTLTIEAVNGDHVRYLYNDYSDSIPTTSNPTESLSELWDPYNS
                     DNNGGSYHLVSDTGVFSLTATYTNLDGLFFGDKPITKVVYDIVGKGKEFTSIVLYEDP
                     VSFLEWTILNGNDITPVSVSPKYYDIDGNRLDISNQSLLYATSLEMNLSNQGATEWVE
                     GTGGQFLDLNGSTIKNHGGRYYADSDNVTNIDKEDYYRSVVFKPTSNDFTLTFGKTAP
                     SPDAVQRNYIWVGLQTSLKINTLPPMPSLVQVDPKTELEVPATPPVPTYVTPNLRTFT
                     PEVFVPESYTPDPFVPEVFTPETFTPETFDPITPVVIPYVSVPEKKVFEASIHPVLVK
                     QTPANSKDVINEDGISVDGKLVPKGATEKWTLTNANLKAGRQEVTAYVMNDPFPAGFE
                     IDREATGTKNTAWTISYDENGKTILSATQATLDYLNANRNQDVVVPVATFVGRPTNDG
                     GTYKNTFTTLIATPKGEYKVVSNIPVIYTPGNDPETPRTPETPNGENPTPDDNLIQPK
                     KDVVDEKGNSINGQSVLPNTVLNYVAEQDFDQYKGIVASQNAIGKGFLYVDDYLDEAI
                     DGTSLVVNSITAANGDDVRELFDMIHVLSKDSLDEKLQALIQDSGISPVGEFYLWVAK
                     DPEAFYKAYVQQGLDITRNLSFKMKQDFVGTITNQTHQVDFGNGYYGNIVTNEVPQLV
                     VHKDVLDKDGKSINNGTVQIGDLVTYKLEGWVIPAGRGYDIKEYRFVDLLQHSHDDYQ
                     SVVIEAKVDFTLPDGTIIKKGDDLSSYTETVYNAQTGKFETRFKEAFLAQITRDQTFG
                     ADGYITVKRIASGEVVNEYTLYVNGNPVISNKAVTNTLEPPKPQAPAKVEKAQLPNTG
                     DAASYSLSVAGVVTLFASLVGLRKRKDENN"
     gene            25287..25802
                     /locus_tag="U1041_000029"
     CDS             25287..25802
                     /locus_tag="U1041_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767181.1"
                     /translation="MRKEPTMEAQVTKNGYKYYIHKPRKPIPVTPQAVPSEAKWKKGL
                     TWLGGALLVGLKNLPYLIMRTAILLVTTPLMILLFIFNLIKSLIVTAIGWFVFKLVVT
                     LGYAAIVVLFYWLIRQPVPQMLENQMDWLMTNFYFPHGVPIYYGWETTIIVVLAIITA
                     LSLTIYSRDDL"
     gene            25887..26114
                     /locus_tag="U1041_000030"
     CDS             25887..26114
                     /locus_tag="U1041_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767182.1"
                     /translation="MNQIVDFINKIGDIGGVIGLGWAAWGAWDLAIGIRRELEDKRDK
                     GVQSIILGALLGATLKALFSALASGLQSIVG"
     gene            26136..26882
                     /locus_tag="U1041_000031"
     CDS             26136..26882
                     /locus_tag="U1041_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001076663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767183.1"
                     /translation="MDKSTLEQLTMSLKDYNPTAYQLMEIVSDSMEKVAMMLLLLFMG
                     LNLLNWHQQLKSNGGELTLQLWFEEIIKYVIAVFLILFLDELFDALTWLFNVIIKLVA
                     KSGLTPFTSKAPAFDNLNVFLKGFFEAIYIAVDFVGQISTKLLILLRSFTLYTYMGIG
                     KIVVACYMMDALRPICLGFLKHYAAAALQGLVLVVVIMLYPAIVTDDLLMVARTGAWT
                     SALMAIGKGIIYIIMLFGSQRMAKSIMQVN"
     gene            complement(27092..27793)
                     /locus_tag="U1041_000032"
     CDS             complement(27092..27793)
                     /locus_tag="U1041_000032"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767184.1"
                     /translation="MSYTYHLVFKKIQQQISTPVLIALQLAQIIMYTAIVFSIPNIIE
                     TLQYGYRYLINFGIILLILRGVYLYSKYKIYSLTPTIENDFDKADRQLLIKEIEESLK
                     KYVDFAKWSCGILATVLALVTNIFVTIFIKSIDDIVSPLQKQAIINGLSQATQNIGDI
                     FIVFFVLVICILGIVLLYYFILQLLTYNQRLVLKVLKNCEYSIKYDIDSLSWWKKTLY
                     FINELFFLDYLKKIL"
     gene            27855..28202
                     /locus_tag="U1041_000033"
     CDS             27855..28202
                     /locus_tag="U1041_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000197452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrgI family protein"
                     /protein_id="HEM4767185.1"
                     /translation="MTRLGSEFLKALDNYERPIWGYMTLRQVVLLFGIILTVILTAAM
                     IWLQLPSFLIYSIALLLLAPFVIFGNHIDEKIKDELRFFLAKQERTYQTDFDRKDYAA
                     NAFIQPKENPETL"
     gene            28162..30516
                     /locus_tag="U1041_000034"
     CDS             28162..30516
                     /locus_tag="U1041_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009729753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
                     /protein_id="HEM4767186.1"
                     /translation="MRLFNQKKTQKLSKAERERAKRLRRTMTASTQNTLNYQWLTPDG
                     LMTVTSDTYSKTYRLGDTSYITATDDERLDVIETNADIFQSLDIDNDLQLLILNRRVE
                     TTSLSSLRYELTEDGYDDYRKEYNEMITERFSDDQNTFKIEKYVTITTQANQDYQAKR
                     ILDDMANVIESQYSSIGISFKEMDGLERLLVFRKLLRKEAFLDFTYEDIAISGLSTRD
                     FIAPNYIKFDKDHFRIDDAYARVLYVRDYPTFLNDKLIKNILDTGIELAISLHAKPYD
                     TAAAMKKVKTVQSSAKRELIKSQKEAAKAGVPGELIAGGKATETSRETEKWTEELQDN
                     DQKMFSGVMTVYLMADSLEELNDYTEQVQRSVRKNTVELDKCYLYQEEALNTILPIGI
                     PFINVKRRFMRDVTTSNLATQVPFTNVDLRSSSPRAVYYGQNQLSKNPITLDRKKDLN
                     TPSGCIFGISGSGKSVFAKAGEIIPTLLRYTEDRIIIVDPEAEYLDIGQEFGAEIITV
                     APGSPHHFNVLDLPDKEKLQVEDSDPIGQKVNLLSTLFENILTEFSDDDFSMIDRVTK
                     QTYETVDQPTFKDWQAILLLQPEKVAKDLALKVEPYTMGSNDIFSHQTNVNMDSRFII
                     FNLKQLSGKLKPFALLVIQDYIWNQVVNHQGETTTWLYFDELQLYFKHSLQATFFTEL
                     YSRIRKYGALPIGITQNPETVLSTEEGRKLVANCEFLALLKLKRTDLEVLSQIIHLTP
                     SLERFVLRPKAKGTGLIVAGDTIVPFENPIPKHTKLYQLVATDT"
     gene            30538..33171
                     /locus_tag="U1041_000035"
     CDS             30538..33171
                     /locus_tag="U1041_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4767187.1"
                     /translation="MYDSDPKQLRKEGRLRVKKQTKEIKGQVPKTARLDARSTYQRAK
                     KTYKQAKKDYRFHKGPKPTARALYFKKGLDKAKVDKQVAKTIYKRSKKADSTYIPNRI
                     KRRGKQGAYIKTRQDTEKVIRDNDILDDWVKGRQNIRQLRYQKATSQRALHSGKELGK
                     YTIKQSYAQTNRAYNFTRGRGFTRTPKEFSWEYKLSKRVKNVRHRLAQTKAGKVAKGT
                     TTVLRVASNPIRTVLTNPLAIKSYFILFLLLGVISLFMGIFAGSGPVQQNEFDLNQSW
                     LQVSKRDREKSTDTVDYWTNIDDVLFFMNYRYGSEWNPESPWKEGLGGDVSALLGFNH
                     YSDALDDIWNHLNSDPHNLKTMLDLTGSSSSLQWTKLGRTEQKEYEELISLSKEVGRY
                     PLYQELANPFSTENEDTRGQPLIILKRFGYNSPTELYDKTQLKATAGQTLRAPLAGKV
                     AISGNQVRISTKEAIFTYEAVGGIRVKDQSSVTVGEEIGKVTTDGYQEIRYQKREAEA
                     TTRTPEKWTAVNPGFYFSSVTYNQTTSVLTTLEGDLGQKSRRIRDYLKPKLPNLTDNG
                     LSAMLGNFATESNITAKRAEGDYLSPPVGASTSSWDDPAWLDMGGPSIYNGSYPNILK
                     RGLGLGQWTDTADGSVRHTLLRQYAQQKGKKWYDLELQLDFMLEGDSPYYVTIVKEIL
                     TSNEDVGTLTQRFLHQWEGNAGDKLLERQHNAKQIHAFLTQQIVGEGGVASSWNFPEA
                     YRSQVTIFPSQAALTTQAGSGYPPGQCTWYSYNRLVELGSITDLSGSYGYLGNGQDWV
                     RNLVAKGWSYSMTPTKGAVVSTVGGFDGTPPQYGHVGIVEAVNPDGSFLVSECNWGGV
                     QDKIHWRVCRPAPYYSFAKPK"
     gene            33196..33825
                     /locus_tag="U1041_000036"
     CDS             33196..33825
                     /locus_tag="U1041_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767188.1"
                     /translation="MKMIDTEKLKLLQLIGLGMAVVTVLGLVFWFSVAGSSKAPTKAE
                     KPPIAKQVEGGELTQEYIKSFLSAYFTKKDLGENRNRYLPFMTEAAYTQEVNTEEEPT
                     NQTYKGYVVDTKLKSATIYIDSENNDVLAQVSYTQTQLQKKNDYTNAQVDVYSQTTLR
                     IHYIKQENKYLVNRIEPILIVDTLTADQTATLPTLNQPTQSIEGEETHD"
     gene            33818..34096
                     /locus_tag="U1041_000037"
     CDS             33818..34096
                     /locus_tag="U1041_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013643238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction endonuclease"
                     /protein_id="HEM4767189.1"
                     /translation="MTKLEHLKNQRRKAEEKQADYLAKAKKEEEKIKELDTQIILAKY
                     EEHSDYLAKHHLTWADIKRQIEEGKLKGETKHVPFNQSDLGHDNDLQE"
     gene            34044..34835
                     /locus_tag="U1041_000038"
     CDS             34044..34835
                     /locus_tag="U1041_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000286085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767190.1"
                     /translation="MYRLTNLTLDTITTYKNKDLVYQALDRENAKVKHQEAQSLLLVE
                     ELDKKGVVLFQEEIFLPFDGIADGLFLRKEKVEEPTEKPLPFWKRGTSQKQEPVVLSR
                     PQKEETVQKRKSLRLLPSLLLGMVTVSFLALGYTVFLVLAQKEEMRTLSHQIETVKTI
                     QKESGHLDAVVRYFLPRYYSEAAELGDFVSSKLQLNHQPGQLQSVILENVEQTEDQLY
                     HLTYVLSLKEDGANQQKRLELTLQVEPTSLYGYLIVDHPKETAYP"
     gene            34848..35366
                     /locus_tag="U1041_000039"
     CDS             34848..35366
                     /locus_tag="U1041_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008088851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767191.1"
                     /translation="MDQEKTTHSIALKGKITVENVIAALYTVAKALHDNRQYKMEHRT
                     FEGETRFNDFMATASEKDMERLLHSEVHLEKLKHYLEEHKVGFTYYQKEEETLLFFET
                     KNRLLVEKALKQMISDITKDPKATETFANHILRKPHEMTPEEKIAYYKTHTVYTGLTP
                     VVTKDLGKEKER"
     gene            35363..37159
                     /locus_tag="U1041_000040"
     CDS             35363..37159
                     /locus_tag="U1041_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000197180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEM4767192.1"
                     /translation="MNRRSSWPYLLVGLFLCLCFQSFYRYYLLSTDAVPFMGMLRMRW
                     LVEHLEQFSLTFSLEPHFLYAGLLGFLLPLLAYVSGDRQVYRTGEEQGSARFATLKEM
                     KRFEDKEIDKNMIFTKRAKMGLFNFRLAYHVQLNKNVIVIGLPGDGKTFTFVLPNLMQ
                     LNSNFVVTDPKGNLVHETGKMLEKHGYAVKVFDLIRLTNSDRFNVFEYMRSELDIDRI
                     SEAITEGTKKSEHMGEDFWVQAELMLQRALIGYLYFDSKDPKTGVSHYTPHLGHVADL
                     LRHLYREDPDNPSPVEQMFEELEEHQPGNYAYKQWKLFQNFKGETRNSVVAILSARYS
                     IFDHQDVRNLISTDTMEMDTWNTHKTAVFIAIPETNNAFNFLSSILFAVGFEVLTHKA
                     DAILQGKVPGYSRQNLRHIQFILDEFAQIGRIPNFAQVLSSIRSREMSIKIIIQAVNQ
                     LESLYKSDWKTIFNNCATHVFLGTNDKDTMEYYSTRSGKQTIRTRSTSKTHSYRNGSS
                     GENKQIQGRPLLTPDEVARIGIEEGLVFISKQHVFKDQKASVYDHPRHVEIAHSPQDE
                     NWYDYVRLGTDIDGLLLYTDDVTSTFEQLTAA"
     gene            37177..37428
                     /locus_tag="U1041_000041"
     CDS             37177..37428
                     /locus_tag="U1041_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767193.1"
                     /translation="MTETQVRLGYFESICQVLALETEDLTVEHPSIWKLIQTADEATF
                     YQLAPHLFLTRDRTEPLLAYPLEATKEEYERFRRLLKGG"
     gene            37431..38663
                     /locus_tag="U1041_000042"
                     /pseudo
     CDS             37431..38663
                     /locus_tag="U1041_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769837.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
     gene            39270..42293
                     /locus_tag="U1041_000043"
     CDS             39270..42293
                     /locus_tag="U1041_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013643233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767194.1"
                     /translation="MMANELGHTDLLNPIKTYTVTIAGASLNQDQVDILVNRMIEEGL
                     ETSSLKQLLERDEFSLEQYIEQGKVSQDLEVEPQSYVVPKQKEKFPDEERIMTYSELR
                     RENEELVKRLENRIKTGELEVNFDIDAYLYDVFTKLGNSHPFKYINDKRLEVLSPIQP
                     ILASIDDKTVDLYKNKGTIEQDSLYQALKSHQRTLGVDVSTRFIGELAIAAYSTNKQL
                     ESLSSESFGSYYGNRTLDNLSHSIERILEYPLIETEARDFEYGFMTIPNAIYHYLEEQ
                     EGEVILDRATLDTLISRIKDQPFQVVEENQKDVTISKAIEKAPDRGQEPISNAGDLHR
                     NPDSLGDISPRTASKPVVNESQPDFPVIAPLKFTTKGEWMSTLKPGYHVITDGELRRL
                     NKFAPGLQATAQWYLNELAGSTITYLYQDRDGIGRLDVQFSDENFAHLTGISPKGTEM
                     KQVVYDFANGQGDYGNIQVSHSIKDKSMVLPLLPDILSSQAFVFNDLSTVEKFHKIDL
                     EQAIKTDDEDLLLAIRDVDGIGVPASIMRIKEKLSVELEGKEQVVLGVYRERDGIIEQ
                     LSIHPDYVKDGGQSMMTVLQNKQYETLSTSQTIEEEKKIPSLSSDRLHDEPALPVSIM
                     DSDSDGISDEEEKKQGSDPYDFRSQPATKHQEEREEQVVEDSSLVVANLIQNQDIAGL
                     NRHLKEGIKEYLDSDKYKDYLTKMSQLNNYSSRNLRLILAQQPTASQVASFKQWKETF
                     GRHVKKGEKALRIFVPITYIKKDENNQPILDKDGKPEIGTTFRLKAAVFDVSQTDGKE
                     MPKAVSDVKDQLTDQDYGNLYRTLMTIAKNNHVSVRFEELEESRKGYYDTANHQIVLN
                     KVGMNKSQLIKTFLHETAHSELHHKDHPQRDQLTRSTAELQAESVAYVVASYYGLDTS
                     NYSFGYLASWSQDKDTLRDLEAQLDIVQQEAKSLIERMDKEMKVLRLSQVKQTQHQFE
                     NKLNHFKEQSDKQLKELQEKRQAEATSKKEKGISK"
     gene            42364..42789
                     /locus_tag="U1041_000044"
     CDS             42364..42789
                     /locus_tag="U1041_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767195.1"
                     /translation="MTPTQEHQLILILSDFVPVLDGDIVQAINPEAHRLTRQIILAKL
                     EEEDDFLLQEPSLSDWMEENKRVLQEVSDEEFQEVLRETILITELQIGHSLFDPLTDE
                     QRGQLAETILQNKIKNEETSSKKSVGFFSKATQFLRGNC"
     gene            43014..43409
                     /gene="mobC"
                     /locus_tag="U1041_000045"
     CDS             43014..43409
                     /gene="mobC"
                     /locus_tag="U1041_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017284807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HEM4767196.1"
                     /translation="MVHKKENRKRYIQKLFRLTPDEDRQIKKNMEQMGVESFQYYAKN
                     QLIHGQLVQIDFPELKALRVAINRIGSNINQIAKQANEDQHTSTEMLEQVLGHLTEIR
                     EMVSAKLSSEEKQSLQARKRIVRMDIDEW"
     gene            43403..45046
                     /locus_tag="U1041_000046"
     CDS             43403..45046
                     /locus_tag="U1041_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017794515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEM4767197.1"
                     /translation="MVAIKPPIQIKTTANLKRAVTYILKEAKTVLPMKTKTDFPFPIV
                     SKNGKLHFQLVSGHQIEDVSIADEEMILTKLAAAFHKGDDDLKELTDNKQVLAHHIIQ
                     SFSPEDNLTPEQVHEIGRKTMLEFLGPDYQFVIATHTDRDHLHNHIIINTTNSSTLKK
                     LRWQKNTLKNLRAISDKHAAKYGAKIIEPAMKNSYTKYSAWRRQNNFRYELKQRLDFL
                     LKHSTSLEDFKEKAKAMDLHVDFSGKFVKYRLLTPLDGKLQERNTRDDTLSKKRLYAL
                     EKIKERVSKNQLTFSTSSIKEMYQQYKEEKELDFELKLDVASWQVEQESPKGIYLQLD
                     MGALDSGAILIPSHKVDKKEDGSYTIYIKEKDYFYFLNPDYSEKNRYMMGVTVARQLA
                     KQNGEVLITKNPHISSMQELVKEYNFLVQHGVTDGEQFSHLEERFNQKIADVDKELKR
                     LDSRLARYHKIEGALLALEKTPENTLSALQLLDEMGLPKDISLSDISQLIQQYDIEKG
                     ALQEFFDDTLREYTNYRELQDVVRVREQTHKAMSDEKIL"
     gene            45280..46605
                     /locus_tag="U1041_000047"
     CDS             45280..46605
                     /locus_tag="U1041_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001209834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISLre2 family transposase"
                     /protein_id="HEM4767198.1"
                     /translation="MRFDERNFVTEMDEYCRQEFLKRIRDYDDSIAPTMRQNGYKRVD
                     ATERTVLFTFGEITFSRNRWRRGQKTLYPVDDWLGLEKYMRYSPELIFHMAKHASKLS
                     YREVCRTICDAYRIGVTKDAVLKATKVVGQLLEEKERYRFYLEEEQAPQRIKASKIYL
                     EGDGVMVKTTSSGNERSNTDLTHFLVHTGVKQVTKDRWILENKHEIVHVNHEKAKEEL
                     LDYLYNHFEITDQTILITNSDNGKGYTKRTFQEIKKSLGIKRHEHFWDEYHLNQKIKT
                     FFKPYPETLYNLAQKAIQTHKKPLLITVLDTVESLIETEEQYETYYSFRQKMMRNFKD
                     TKPAKLRNLSHKGLGVMESQHRKITYRMKHRGMYWSIKGACTMAKMILLERIDKLDEV
                     FFGDWRKTYQPYQNQRFSAGRANKKIEEPPNIRRYHSGHKTGRWSTHAK"
     gene            47144..47755
                     /gene="rpsD"
                     /locus_tag="U1041_000048"
     CDS             47144..47755
                     /gene="rpsD"
                     /locus_tag="U1041_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014407971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEM4767199.1"
                     /translation="MSRYTGPSWKQARRLGLSLTGTGKELARRNYVPGQHGPNNRSKL
                     SEYGLQLAEKQKLRFSYGLGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRL
                     GLATTRRQARQFVNHGHILVDGKRVDIPSYRVEVGQVISVREKSIKVPAILEAVEATL
                     GRPAFVSFDAEKLEGSLTRLPERDEINPEINEALVVEFYNKML"
     gene            47821..48270
                     /locus_tag="U1041_000049"
     CDS             47821..48270
                     /locus_tag="U1041_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEM4767200.1"
                     /translation="MWRKYFLLVLLAILVVGGAFFLSQSAATPNESDYVKAVKSYQAI
                     SIDEVEQKVQDEEEFILYIGRETCPYCRDFVPKLTEAVERSRATIYYLDSESDPNGKI
                     QQFRQSQGLATVPSLTYYKSGELSGILRKGSQATLSEIENFLALQGQ"
     gene            48398..49915
                     /locus_tag="U1041_000050"
     CDS             48398..49915
                     /locus_tag="U1041_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavocytochrome c"
                     /protein_id="HEM4767201.1"
                     /translation="MKKKAWLGLLMSLLAVLFLVACGGKSEKTATSSSSTTSSSSEEA
                     VSGASEKVYTDPSELKDSYDVIVVGSGGAGMSAAISAKDAGASVALLEKMPVIGGNTA
                     KSSAGMNASQTKFQEAEGIADSNDKFYEETLKGGKGTNDPELLRYLVDNSASAIDWLD
                     GMGITLSNLTTTGGMSEKRTHRPADGSAVGGYLVNGLYHNLVEREVPIFVNADVTKLQ
                     DKDGAVTGVEVKIAGETKKISAKAVVLATGGFGADLEMVAKLNPALKGYVTTNQEGST
                     GDGIALAESEGAATVDMEQIQIHPSVEQETSYLITEAVRGEGAILVNSKGERFVNELE
                     TRDKVSAAINSLDPNYAYVIFDDALKDRVKAIAQYEEKGLVKTGATLADLAKEIGVPA
                     DTLQTTLDTWNKAVADKNDAAFGRTSGMDHALNTGSYHAIKVAPGVHHTMGGVKINTN
                     TEVLKTDGSAISGLYAAGEVTGGVHGQNRIGGNAVADIIVFGRQAGEQAAGFAKK"
     gene            50001..51353
                     /locus_tag="U1041_000051"
     CDS             50001..51353
                     /locus_tag="U1041_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM4767202.1"
                     /translation="MKKKIVLLLGVIAVIVLIWSAIAGQRQQSYAEAELRDQDKIWII
                     TDLHYLSQDLFDDGEAFSYIEKTAAGKDLRYGKERMEALVEQVEREHPSLLLVSGDLT
                     LNGEKQSMVELAQYFTQIEEKGTEVLVIPGNHDIASGWARAFKGNQQEVTDQVTAQQF
                     EDLFADNGYQQASSRDQASLSYLAKPFSNAWFLMIDSNIYSDGYGKGAPPTNGRIKKE
                     TLDWIEVQLKSAKEAGVSLIPVVHHNVLQQHAMLSKGYTLDNAADLKTLFNQYGIQFG
                     FSGHTHSQNIVEEDLGQVNYTEVVNGAFSIYPAIIGQLSLDDTSIHYQKTQLDMASWT
                     EKHQPSDPNLQDHLRYLQTVFDNTTDIMVHNVLNDERWYDGETADAISQFIMPANRAY
                     FSGEKLDQTWLDETVFPSQAYQTLQAASPRSFLADYLDVIIKRSQSRDVEKLAITTKN
                     "
     gene            51496..52509
                     /locus_tag="U1041_000052"
     CDS             51496..52509
                     /locus_tag="U1041_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4767203.1"
                     /translation="MTLLSIAIPSYNSEAYLHYCVHSLVMGGDKVEILIINDGSTDRT
                     QEIAEELANQFSNVRAIYQENKGHGGAVNTGIREAKGKYFKVVDSDDWVDTRAYLKIL
                     ESLQALEDENTPVDAFISNFVYEKEGQSRKKSMSYQDVLPENRIFGWEDVGAFSKGQY
                     MMMHSLIYRTDLLREVGLVLPEHTFYVDNIFVFTPLQAVKTMFYLPVDFYRYFIGRND
                     QSVNESVMIKRIDQQLKVNRILVDNLDLDVIENPDLRSYLLNHVEITTIISCALLNRA
                     GTAEHMMKKQELWHYIRDNNPALFKIVRKGLLGQLTNLYGYPGRKISNAVYKIAKRIY
                     GFN"
     gene            52578..53489
                     /locus_tag="U1041_000053"
     CDS             52578..53489
                     /locus_tag="U1041_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM4767204.1"
                     /translation="MQELGQTGLEVSRIALGCMRMASLSGQETAQVLKTVVEQGINFF
                     DHADIYGGGESEIRFAQGAKLAGLKREDLLLQSKCGIRKGYFDFSKEYILESVDGILK
                     RLDTEYLDVLALHRPDALMEAEEVAEAFYLLKKAGRVHHFGVSNQNIYQMELLQSYLD
                     QPLAVNQLQLSPAHTPLIDAGLHVNMKDDAATMRDGGLIDYCQLKKITIQAWSPFLID
                     LQRGIFANHPDYALLNQTIGEIAERYNVSHETIVVAWILRHPAKIQTIVGSMNPERLT
                     KIAQASQITLTRPEWYEIYRSAGNILP"
     gene            53499..53585
                     /locus_tag="U1041_000054"
                     /pseudo
     CDS             53499..53585
                     /locus_tag="U1041_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638825.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            53682..54056
                     /locus_tag="U1041_000055"
                     /pseudo
     CDS             53682..54056
                     /locus_tag="U1041_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638825.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            54151..55902
                     /gene="aspS"
                     /locus_tag="U1041_000056"
     CDS             54151..55902
                     /gene="aspS"
                     /locus_tag="U1041_000056"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEM4767205.1"
                     /translation="MKRSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREG
                     IMQLVINPESVEAEVMAKAESLRSEFVIEVTGTVVEREQANDNIPTGAVELQVTSLTV
                     LNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDEHEF
                     IDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKC
                     FRDEDLRGDRQPEFTQVDLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMAY
                     DHAMNFYGSDKPDTRFEMLLQDLTDTVKEVDFKVFSEAPVVKAIVVKGAADSYSRKDI
                     DKLTEYAKQFGAKGLAWVKVDKGELAGPVAKFLTGITENLTASLQLEDKDLVLFVADE
                     LEVANNTLGALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPT
                     EETDHHLDGDLAQVRAVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFSAEDAHEQ
                     FGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTV
                     ASAQLEELALDITLENE"
     gene            55895..56827
                     /locus_tag="U1041_000057"
     CDS             55895..56827
                     /locus_tag="U1041_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM4767206.1"
                     /translation="MNKFFRKQRVRFLRKARKNKFWSVILGISREKYAERISGSIIYG
                     LLSSIAVNFFFRPGNVYSSGVTGLAQIVSALAASYAGWNVPIAVVYYGLNIPLLILAW
                     YKIGYKFTIFTFITVSFSSFFIQFMPPVTLTTDPLVNAIFGGLMLGTGIGFALRNNVS
                     SGGTDIVSIIIRKKTGRQVGSISLIVNIMIMLIAGMTFGWQYALYSMVALFISSRMTD
                     AIYVKQKRMQAMIITNQPERVIKKIHKNLNRGVTIINGAEGAYNHEQKTVLITIITRA
                     EFSEFKQIMKKADPQAFVSVADNVNIIGRFVESD"
     gene            56904..57356
                     /gene="nrdI"
                     /locus_tag="U1041_000058"
     CDS             56904..57356
                     /gene="nrdI"
                     /locus_tag="U1041_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HEM4767207.1"
                     /translation="MKKKIYLVYISLSGNTESFVKRLKSFFQFQTDWEIELVHVKDLV
                     KQDISFYQLDAPFVAFLPTYLEGGNGVDNGDVEILTNPLGDFIALGTNAELCLGVVGS
                     GNRNFNNQYCLTAKQYAERFNFPVIDTFELRGMQNDIERIGRKIMELM"
     gene            complement(57509..59560)
                     /gene="pulA"
                     /locus_tag="U1041_000059"
     CDS             complement(57509..59560)
                     /gene="pulA"
                     /locus_tag="U1041_000059"
                     /EC_number="3.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pullulanase"
                     /protein_id="HEM4767208.1"
                     /translation="MALRQFQAFLDDVATIRLVMEKRFDSEHMSFSLESNDATSQLFI
                     HSCLEVDNLVIYYLTSLHALTLDKDYTIYDQDRNKAELGYGHIVRSTLFEQSYTYNGQ
                     DLGATYRPEATTFKLWAPISKQVFLVLEGNPHAMTKGAKGVWEITVEGDLEAHSYHYL
                     HKVNGEWISVHDPYALSSTANSGDSYVINPDKLHKIRRAKTQRPISQAIIYEMSVRDF
                     SWQKEAGFKHRSQFLGLTESPTMDGMKLGMDYIRELGVTHIQLLPVYDFGSVDENKPQ
                     AVYNWGYDPMQYNLPEGSYSSQPNDPYARILELQETIQAYHDADISVIMDVVYNHVYH
                     AEKYAFELIVPGYFYRYDDHGMRTDGTFCGNDVASERSMVRNYIKQSLRQWLELYGFD
                     GFRFDLMGILDSETINQIQTELSAIHPNVYLYGEGWKMATGLEFEKLAHQYNAEHLPE
                     ISFFNDDYRDTFKKLLLNPNRLVDKQLHEKVQHLLTGSRLSHFLTPQQSLNYIECHDN
                     ATAFDYFHIENPNWTPQQQKRAASFGLQLILISQGMAFIHSGQEFFRTKDELDNTYNV
                     PDRINRLDWTRAIRYKEHIEFIQELITFRKNNPILSQDNYESIQETCDFYWLTEYVLR
                     YQVTSEEKTIQFIINFADSDFTYEREKDKAVLYNYPPVEERDQQEITIAGQSICILED
                     K"
     gene            complement(59584..60567)
                     /locus_tag="U1041_000060"
     CDS             complement(59584..60567)
                     /locus_tag="U1041_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4767209.1"
                     /translation="MRATIKDVAKLAGVSPSTVTRVIQNSSAISQKTKDLVRKAMADL
                     NYHPNLNARSLVSSYTQVIGLVLPDDSDVFYQNPFFPTALRGISQVAADHNYAIQIST
                     GKNEEQRLEAISQMVYGKRVDGLIFLYSKPDDPLVQLAIQHKFPFLILGKADSPFISL
                     VDNDNIQAGFEATNYFINKGYKNIAFVAGNKELVVSQDRYTGYKNALKSHNIPLDENK
                     VKFVSGFLLEDSAYKISKKLLKQDLDAIVTTDTSVAEGVVKYLNEVGVKLPIISFDSV
                     KPKLDIEAYVDVHAIKLGRVAFNTLHQIINDNKDDKQVCYRRVIPHTITEL"
     gene            complement(60577..61359)
                     /locus_tag="U1041_000061"
     CDS             complement(60577..61359)
                     /locus_tag="U1041_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767210.1"
                     /translation="MLPYPFSYFSSIFSPRNMFANRRLMNLWQRLFTTLFLVALLLIP
                     SSLQTVNLETYPLENFVEGIYAPLTDQVVDDLRQHAVIENNHLTYTGNTNWEQVTFGD
                     TVSSSSDFTYQFANQSLTIRKGSDILSELTYEGLNTDDFASKETLTATISKKWYQANR
                     AAVGLSITLISTFILTTNLLFILLGASFFLFLTKKSRFFHFETFAECYNFALNCLGLP
                     TLIACLIGLFGQPVTTLLTIQNILFVLCLLWVFFKTKFRDEI"
     gene            complement(61419..62261)
                     /locus_tag="U1041_000062"
     CDS             complement(61419..62261)
                     /locus_tag="U1041_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001065636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4767211.1"
                     /translation="MKVSVKTRRILNQTLTYLYLIVLSVIIIYPLLITIMSAFKSGNV
                     VAFKLDSNINFTLDNFSKLFSETLYGTWYLNTLIIALLTMVIQTSIVVLAGYAYSRYN
                     FIARKQSLVFFLIIQMVPTMAALTAFFVMALMLNALNQSWFLIFLYVGGGIPMNAWLM
                     KGYFDTVPISLDESAKLDGAGHFRRFWQIVLPLVRPMIAVQALWAFMGPFGDYILSKF
                     LLREKEFYTVAVGLQTFISDVKNMKIAYFAAGAILIALPISILFFFLQKNFVSGLTSG
                     GDKG"
     gene            complement(62263..63558)
                     /locus_tag="U1041_000063"
     CDS             complement(62263..63558)
                     /locus_tag="U1041_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003027817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4767212.1"
                     /translation="MTMKQNPGKALLLSLIPGLGQIYNKQKAKGYIFLGVTLAFLVYF
                     IAIAAGELGNLITLGSVRGQDNSLFMLIRGSFHLIITVVYLAFYALNLKDARDTAKRW
                     NSGMPVATTLKEMVKGIYENGFPYLLIIPSYIAMTFAIIFPVVVTLFIAFTNYDFKHL
                     PPGALLDWIGITNFTNIWKLSTFRTAFGSVLGWTIIWALCASTAQIVIGILTAIIANQ
                     PFIKGKRIFGVIFLLPWAVPAFVTILTFSNMFNDSVGAINTQVLPFLSKFLPFIDNFL
                     IPWKTDPFWTKVALIMMQAWLGFPYIYVLTLGILQSIPNDLYEAAYIDGASAIQKFRN
                     ITLPMILAVAAPTLISQYTFNFNNFSIIYLFNNGGPGSVGGGAGSTDILISWIYKLTT
                     GTSPQYSMAAAVTLIISMIVISISMIAFKKLNAFEMEDV"
     gene            complement(63665..64924)
                     /locus_tag="U1041_000064"
     CDS             complement(63665..64924)
                     /locus_tag="U1041_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM4767213.1"
                     /translation="MKHNLLKSVALLAASTAVLAACSNSGSSTEASKSAEGSKELTVY
                     VDQGYESYINDVKADFEKENGVTVTVKTGDALTGLDNLSLDNQSGSAPDVMMAPYDRV
                     GSLGSEGQLSELTLADDSKADDTTTALVTNGGKVYGSPAVIETLVLYYNKDLLTEAPK
                     TFAELETLAKDSKYAFEGEAGKTTAFLADWTNFYYTYGLLAGYGGYVFGENGTDPKDI
                     GLANEGAIKAIEYAKTWYEKWPQGLQDGTAANNLINTQFTDGKAAAIIEGPWKAASYK
                     EAGVNYGVATIPTLVNGKNYSAFGGGKAWVVPTGAKNQEMAQKFVDFLTATDQQKALY
                     DATNEVPANTDAREYAVSKNDELTTAVINQFASAQPMPNISEMGSVWTPAGNMLFEAA
                     SGAKDAKTAATDAVKAIADEIAQKHSN"
     gene            65226..66746
                     /gene="malQ"
                     /locus_tag="U1041_000065"
     CDS             65226..66746
                     /gene="malQ"
                     /locus_tag="U1041_000065"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEM4767214.1"
                     /translation="MKVRQSGVLMHISSLPGKYGIGSMGQSAYEFVDFLVRTKQRYWQ
                     ILPLGTTSYGDSPYQSFSAFAGNTHFIDFDILIDKGWLAAEDLHGVDFGQNPTEVDYA
                     AIFYARRPLLEKAVANMKAQGLPEDYWMFLGENDFWIHTFAEYMAIKEHFDLKPWTEW
                     EDQGARLRYHDTLEYYRHLLADRIDYHRITQYLFFSQWKALKAYANAKGVEFVGDMPI
                     YIAADSADMWANPHFFKTDEEGKPSVVAGCPPDAFSEIGQLWGNPIYDWEAMKHDGFT
                     WWVARLRESFKIYDMVRIDHFIGFASFWEIPAGEETAVNGYRVEAPGFELFETIKYHL
                     GDLNIIAEDLGTVTDKVIQLRERTGFPGMKVLQFAFDPEGDSIEMPHNHPNNVVAYTG
                     THDNNTILGWYENETTKESRAFLDKYSNRREGETVSHALFRLLFGSPAFMAVATMQDL
                     LGLDGSARMNLPNTLGGNWTWRMTADQLTPEIEAELLDLTETYRRVNVHLVDKKSE"
     gene            complement(66784..66975)
                     /locus_tag="U1041_000066"
     CDS             complement(66784..66975)
                     /locus_tag="U1041_000066"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767215.1"
                     /translation="MKHFKKYYWQYCFLYLLFYLLAKLLFPSLAAIIITIGSWSLVAM
                     LAYTIYYWISYWLYVRKQR"
     gene            67104..67628
                     /locus_tag="U1041_000067"
     CDS             67104..67628
                     /locus_tag="U1041_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767216.1"
                     /translation="MKRPIHLYIFVVLSSIASVLRGFNIFFAKYDEAVVRQLLQNFNV
                     EGIDEAYFTYMRESINFQTNLVNKAFAVVLLLAVIATIVLLFLKKNEQASYTYLGYLF
                     VTLLFSTYAFIGEKGLGQIYTDSVMRQSVEAQAMMNYIIRVVLFAIYFGVTIFFHLRK
                     PKEKPSTAINSTDI"
     gene            complement(67678..69111)
                     /locus_tag="U1041_000068"
     CDS             complement(67678..69111)
                     /locus_tag="U1041_000068"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEM4767217.1"
                     /translation="MTKTSLTANQPRFSIRTYSLGATSVLLAYACLAAGPVAHANIGT
                     NTNTSTNLRTVQTSTSSSVGQEITTPVTQPTSPQIGSEQTTANTITSPSNSGQTDQTS
                     HEKIETGASTSYGQQTQVTIPQTSQDRIAISPQTTPTTRDNQTQTAPTSSSHPQTSSS
                     AISQKTNTQTQTNTTRARLTTQTRTASTRSSSTSALGDDYPYTVVDAVDPWRLYTRQC
                     TSFVAFRLSKVNGFEIPPAYGNADVWGYRAQREGYRVDMSPAVGSVAWWTSPMHVAWV
                     SSIQGDMVEIEEYNYGTRYTYNRRLIHKNSVSGYIHFKDLAGSPVSQTSPTPTQTHTS
                     GLANSGTYTFTQQAPIKNEAKQSSTTLDYYYAGESVRYDRVLTADGYQWISYVSYSGQ
                     RRYIPIKQVQTSPTPQQTNKNLPSSGTYTFSSKAIVRNSPSQSASEITYYGAGSSVRY
                     DRVVTSEGRQWISYISYSGARRYIAIP"
     gene            complement(69437..71125)
                     /locus_tag="U1041_000069"
     CDS             complement(69437..71125)
                     /locus_tag="U1041_000069"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEM4767218.1"
                     /translation="MNQKQVIAERLAAILPSLEVEAIYNLLEKPKSSEMGDIAFPAFS
                     LAKVERKAPQAIAADIVEKLDPTGFEKVVATGPYVNFFLDKAAISHQVLTDVITEKDQ
                     YGKLNIGQGHNVTIDMSSPNIAKPFSVGHLRSTVIGDALANIHEKLGYKPIRINHLGD
                     WGKQFGMLIVAYKLWGDKAAVEADPISELLKLYVRINAEAEEKPELDEEARQWFKKLE
                     DGDSEAHELWQWFRDESLVEFNRIYDKLGVTFDSYNGEAFYNDKMDEGIQILEEKGLL
                     QESKGARIVDLESYNLPPALIMKTDGATLYITRDMATAMYRKRTYDFVKSIYVVGQEQ
                     INHFKQLKAVLKEMDFDWSDDMTHVTFGLVTKDKKKLSTRKGNIILLEPTLDEAISRA
                     LTQIEAKNPDLENKEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGPYVQ
                     YAYARIQSILRKANFVPSAENDYKLADAESWDIIKHIQNFSNVVERAGDKFDPSLIAK
                     YAINLAQAFNKYYAHTRILDESPERDSRLALAYATGLVLKEALRLLGVKAPEKM"
     gene            71232..71672
                     /gene="argR"
                     /locus_tag="U1041_000070"
     CDS             71232..71672
                     /gene="argR"
                     /locus_tag="U1041_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEM4767219.1"
                     /translation="MNKAGRHDLIKAMIRQEKIGRQTDIQQGLEARGVVVTQTTLSRD
                     LRELGVIKIHENGRSFYSLAIEEERVNFIQLLAQYAYKVDRASFILVLHSELGEAALM
                     ANIIDAEKPTSILGTLAGADTLLVICRDEEAAQQVEAEINYYIN"
     gene            71687..74227
                     /gene="mutS"
                     /locus_tag="U1041_000071"
     CDS             71687..74227
                     /gene="mutS"
                     /locus_tag="U1041_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEM4767220.1"
                     /translation="MSTEKISPGMQQYLDIKAQYPDAFLLFRMGDFYELFYEDAVEAA
                     QILELSLTSRNKNAENPIPMAGVPYHAAQQYIDTLVELGHKVAIAEQMEDPKQAVGVV
                     KREVVQVITPGTVTDSSKMGADSNYLVAIDRQGVQFALSYMDVSTGQFFVTSLDDFTI
                     LCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA
                     AAGKLLSYLHRTQMRDLSHLQKVVHYEIKNYLQMDYATKSSLDLLENGRTGKKHGSLY
                     WLLDETKTAMGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVYD
                     IERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHA
                     LISSAIDPEAQGAITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGINNL
                     KIDYNKKDGYYFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSS
                     NLEYEIFMRIRQEVEKYISRLQKLARTIATIDVLQAFAVVAEQQHLVCPRFTDQRELT
                     IDRGRHAVVEKVMGKQTYIPNSIHLNTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM
                     GSYVPADQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDE
                     LGRGTATYDGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEK
                     DGQVTFLHKIAQGPADKSYGIHVAKIAGMPEELLERADRILQTLENQAPTAPANPAPS
                     VVEEPSGQIDLFADTPSHPVLDELEKLDIYNMTPMEVMMAVAELKKKL"
     gene            74474..74869
                     /locus_tag="U1041_000072"
     CDS             74474..74869
                     /locus_tag="U1041_000072"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767221.1"
                     /translation="MQHNQDLRAKLFQLEQLVLDIYAELERQNPQFAPISWYVYHLGL
                     DDEQASELMQYFLFQQDKSLEELTAWLEEWVATNRYPYPRDFIEKMARRYHEEVTRAV
                     DRADASLSLEDLEQLKASGAFDGLDEFEE"
BASE COUNT        23031 a        14427 c        16858 g        20750 t
ORIGIN      
        1 tgggcttttt gcccagcctc tttcgtttac acacttgtca atcttcccca aaaatttctt
       61 gagcaaggcg acgacccgtc ggtgtagctg caaggccacc ttcagcagtt tcacggaagg
      121 cagttgggag ggctgctcca acttggtaca tggcattgat gacttcatct gcaggaattt
      181 ttgatttgat acctgctaga gccatatcgg cagctaccat ggcgtagctt gctcccattg
      241 catttcgttt gacacatggg acttctacca gaccagcgac gggatcgcaa atcagaccca
      301 gcatattttt gatgacaaag cagatggctt ggctggcttg gttgggagtt ccacctgctg
      361 caagtgtcag ggctgcggca gacatagcag aggcagagcc gacttctgcc tgacagcctc
      421 cttctgcacc tgagatggag gcgttgttgg cgataactag accaaaggcc ccagctgtaa
      481 agaggaagtc aagttgctgc tcttctgtca agtttaactt gtcaatagca acaccaagaa
      541 cggcaggcaa acaaccagca gaaccagcag ttggggtggc acagaccaag cccattttgg
      601 cgttcaactc gttgacagcc atagcatttc ttgcggcgga taggacagcg gaatctgaca
      661 gggttttacc agatttcata taggcatcta acttggcagc atcgcctcct gttaaaccag
      721 atacggattt gctttcagta agtccatcta cgatggaggc tttcataact gtcaagtttc
      781 ttgacatgat tgtcaagatt tcttcgcggc tgcgtccagt taattcaatc tcggtagcaa
      841 tcattagttc agcaacattt cctgaaaact gctctgcttg ttgaaccaat tctttgatgg
      901 tataaaacat gttttcctct ttctagttaa agaaggtgac attgtgcagg tgtggaattt
      961 tttcaatttc tgcaatagaa ttttcacatt ggcgggcatc gacttcaata atcataatgg
     1021 ctttttcgcc agcctgttca cgtgttacgt tcatttgggc gatattgatg tcatacttag
     1081 aaagaacatc ggtcactttc gcaatcatac cagggacatc ttggtgaaca ataataatag
     1141 ttggcgtatt catattgaga ttgacagaga agccgttgag ctctgttact tgaatgtttc
     1201 ccccgccgat ggaaacgcct gtggctgaga tggatttttt atcgtttttt atgatgattc
     1261 gagtggtatt gggatgtggg gtattactgt ccttgttgac acgccagtaa accttaatac
     1321 cacgctcccg agcaatatcc agagagtctg ggatacgagg gtcatccgta tccataccca
     1381 aaatacctgc caccaaggct acatcggtgc catgtcctcg ataggttttg gcaaaggagt
     1441 tgtaaagttg aaattcaacc tctgtcggct catcgccgaa gatggaagac acaattttcc
     1501 caattcggac cgccccagct gtgtgactag aagatggacc aatcataaca ggcccaataa
     1561 tatcaaagac cgactgaaat tttaagtttg tcatagtaat cctcacgttt ttcttggtac
     1621 tattatacca aattttctag tcagggaata tgcctagatg aatgtatttt cttatgttaa
     1681 aattctatcg cttacccttt ttgtgtggta taatacaagt tgttcaaaat cgtcaatcgt
     1741 ttttggataa tcaaattttg gaatacgacc ttcaaatcgt tatttctacg aaaagatggg
     1801 agaagatgat gtcaatagac aattcgaaaa cccgtgtcgt tgtcggtatg agtggcggtg
     1861 tggattcatc ggttacggct ctcttgctca aggagcaggg ctacgatgtg atcggtatct
     1921 tcatgaaaaa ctgggatgac acggatgaaa atggcttctg tacagcaaca gaagattaca
     1981 aggatgtggc tgcagtggca gaccaaatcg gcattcctta ctactctgtc aactttgaaa
     2041 aagagtattg ggaccgcgta tttgagtact ttttagcaga gtatcgggct ggccgcaccc
     2101 ccaatccaga tgtcatgtgt aacaaggaaa tcaagttcaa ggccttcttg gattacgcta
     2161 tgaacttggg ggcggactat gtggcgacgg ggcactatgc tcagatatca cgcgacgagg
     2221 acggcaccgt tcatatgcta cgtggggcag acaatggcaa ggatcagacc tatttcctta
     2281 gccaactctc acaggaacaa ctgcagaaaa ccatgtttcc gctcggccat ttacaaaagc
     2341 ctcaggtgag ggaaatagca gagcgagcag gcttggcgac ggctaaaaag aaagattcga
     2401 caggcatctg ctttatcggt gaaaagaact tcaaagaatt tttagggcag tatttgccag
     2461 cccagcccgg ccggatgatg acggttgacg gtcgtgatat gggagagcat acaggcctta
     2521 tgtactatac cattggtcag cggggagggc taggtatcgg aggacaaatc ggtggggaca
     2581 atgagccttg gtttgttgtc ggaaaagacc tgttaaaaaa tatcctctat gtcggtcaag
     2641 gtttctatca tgagtctttg atgtcaactt ctttacaggc tagtcaagtg cactttacac
     2701 gtgatatgcc tgaagaattc acacttgagt gtacagctaa attccgctat cgtcaaccag
     2761 atagtcaagt aactgtcaag gtaaaaggtg acaaggcaga agttattttt gcagagccac
     2821 aacgagccat cacaccaggc caagccgttg ttttctacga cggtcaagag tgtctgggcg
     2881 gtggcatgat cgacatggcc tacaaagatg gggttgcttg tcagtatatt taatcaaaaa
     2941 taaaagctta gcaccctcat gctaagcttt ttatcttatc cccagaaagc atcttcggct
     3001 ttttggtcgg ctgagaagag ccaaacttcc ttgattttgc catcttccat acggaaaaga
     3061 tcgatgccat tcatgtttag ttcttcacca tctgttcgag taccgaggaa tgttacgtta
     3121 gcggcaacaa gagtatcatt atcggatacc cagtttgtca ctactttgaa agttccattt
     3181 gttttttcgg cgaaagttgc tagatgtgct ccgagtactt ccttaccaat tttagcacca
     3241 gatgttgaat gatttccggg ttgatgccag ataatgtcat tagccattgt ttcaaaaaga
     3301 gctgcaaaat caccagcgat gagagcattg ttataggcat taaaaatttc caagtttgtt
     3361 gacatttgat gtcctccaat ttttttgata tagtacaatt atagctgaag cattccatta
     3421 tgcaagtagg tacttttgca ttcgttggta tcaaaagtga tactattgtg ataaataaag
     3481 gagaattttt ttgaaaaaag ttagtgaata tggtatttgc ccttttgcaa caacacaaaa
     3541 agtcttgact ggtaagtggg gattggtgat tatctaccaa ctcagtacag gaacgaaacg
     3601 cttcaatgaa ttacagcgac tgattccagg tattactcaa accatgttaa caaggcacct
     3661 tagacaattg gaggaggatc gcattattag tcgcacggtc tatgcagaag tcccccctcg
     3721 tgtagagtat agcttgactg agatgggcga aaaatttcgt tcggtactgg atgctgttga
     3781 ggcttggggc ttagaatata ttgaaacgtt agcgtaacac tagatttgaa attctacaaa
     3841 tcttttgata gaataagagt aacaattatc atgatggtca aagctcatgg gaattgtagg
     3901 cttttttgtc ctgcagtttt cgagagtttt ggctattttt tgctattgag gagagaagat
     3961 gacctttttg atattaccaa aatttcagaa tcagaactga gtcagtttcc taatctaaaa
     4021 acgattgatg gaacagtgtt attgatgaca gatgatgtaa aactgttctt gaaatcgaaa
     4081 ggtcttcgat ttttgattga ggagtagctt gtcaatctaa ttgacagatg tgtaaaggag
     4141 gggaaaatgc gtgttgtagt tattcaagct agtacaagaa ctgagattaa ccagctcttg
     4201 tttgacacag tttgtgaggt agtggacgga caccatgatg ttgttaatct aggcgtgttt
     4261 ccagaagaaa tagaaaacta cacctatatg gaagtagctg ttatgattag tctgttgatt
     4321 gaaacaaatg cagctgattt tgttgtaacg gggtgttctt ctggacaagg aatgatgatg
     4381 gcttgcaata gtttgccagg tttacgttgt ggctttgtgc aaacccctca ggatgcctat
     4441 ctatttggtc ggattaacaa cggcaatgtg gtttctttac cactaggctt aaattttggt
     4501 tggtctggcg agttgaattt gcgttatacc ttagaaaaac tatttgaagg agaatttaat
     4561 acaggctatc cagttcaaga tgctgaacgt aaaaagaagg aagcaactga attagtgcat
     4621 cttcatcagt tgacaacacg ctcttttttg gaaattttac caaactttaa tgaatatcta
     4681 ttgactaaaa ttttaagaag aaaaacgttt gtcgattata tttatcaaaa cgggacgaat
     4741 aaactccttt tagaaaagtt aacggcttat aaggtttgaa ctttagaagc agatttgata
     4801 caatatttct aataagaact atgatggtca aagctcatgg gaattgtagg cttttttgtc
     4861 ctgcagtttt cgagagtttt ggctgttttt tgctataggg gagagaagat ggatttcaga
     4921 acgagacacg acaatcaaat cttcggtgtc cgtgcgacgg gcttggtggt acaagatgag
     4981 aaactttatc ttgttaagtc acctgagggg aaatattaca ccttaggtgg agctattcag
     5041 cttggcgaaa caaccgaaga ggctgtgcaa cgggaaatac aagaagaaat cggaattgag
     5101 gtggaggttg gaccactagc atttatcgtt gaaaatcagt tcaccttgca ggagaaatcc
     5161 tatcatcaga ttgaatttct ctatatagtt accccactgt ctaatccagc taccaatctg
     5221 gaagaaggga attctgttcg ccagtgtgaa tgggttactt ttgcggactt agagaaactg
     5281 gatctcaatc cagattttct taagaccgag ttagccaact gggacggaca actaaagcat
     5341 tttatgaaca aagacaacta aagtagcgga ggaaaccatg ccggttaaat tgattgccca
     5401 tgtcttgctg actgttgcag acagtcactt gattattcag cgtttgcaga ttaagcgtgg
     5461 caaacccaat gtttttcctc aatattggga cattccaggc ggtcgtgtcg aggagaatga
     5521 attaccccgt gatgctgcag tgagagagtg ttttgaggaa acaggtattt tgatagaaaa
     5581 ggaaaatctg accattatcc atgaagatag tcagtttgat gaagaaaaac agacggtgtt
     5641 tacaaggttg gtctatgaag gaacacttac agaacaggta aaaaccattc ttcttgaccc
     5701 agaagaacat acagattttc tctggttagc ccctagcgat aaaaataaga aaaacttagt
     5761 tccatatctg gacgaaattt tagaaaagag agggatgaat ggatttcaga accaaagttg
     5821 acaaccagat tttcggtgtc cgtgccactg cattgcttat aaaagacggg aaaatatttc
     5881 tcacgaagga ctctaagggg cgttattata ctattggcgg tgcggttgag gtcaatgagg
     5941 tagcagcaga tgcggctgtt cgagaagtca aagaagaatt agggattgac agtcgtgtca
     6001 atcaactggc ttttgttgtc gaaaatcaat ttacacatga aggcatagac tttcacaata
     6061 tcgagcttca ttttatcgtg gagcccattg gagaaatgcc tgagaagatg attgaaggga
     6121 agttgaagca aacttgtgaa tggattgcac ttgacaacct tgtcaactta gatgtagtac
     6181 cagcttttct gtctcaagca ttgccaaact ggagtggaca agttaaacac attatgaaca
     6241 tgaaggagaa aacaacatga cacacacatt tgcagaaaac tatgatgtca tcgtgatcgg
     6301 tgcggggcat gcgggtgtag aagctggctt ggcagccagt cggatgggct gtaagactct
     6361 gcttgcaact attaacttgg atatggtggc ctttatgcca tgtaatccct ccattggtgg
     6421 ctctgccaag gggattgtgg taagggaaat cgatgctctg ggtggcgaaa tgggtcgcaa
     6481 cattgacaag acctatatcc agatgaaaat gcttaatacg ggtaaggggc cagctgttcg
     6541 tgccttgcgg gctcaggcgg ataaagcaga gtacgcagcg gagatgaagc ggacggtgga
     6601 gcgtcagaaa aatctgaccc tgcgtcaaac catgattgat gagattttgg tggaagaggg
     6661 caaggtgatc ggtgttcgta cggctaccaa ccagaaattc tcagccaagg cggtcgtagt
     6721 gacaactggt actgctttgc gtggtgaaat tatcatcggt gatctcaagt attcgtcagg
     6781 tcctaacaat agcctagctt ctatcacgct ggcggataac ctgaaagaac ttggacttga
     6841 aattggtcgt ttcaagacag gaacgccacc gcgtgtcaat gctcgtacca ttaactacga
     6901 cgaaactgag attcaaccag gcgatgaaaa gccaaaccat ttttcattct tgtccaagga
     6961 tgaggactat ttgcaggatc aaattccttg ctggctgacc tataccaacg cgaccagcca
     7021 tgagattatc aacagcaatc ttcatcgggc acccatgttt tcaggtattg tcaaagggat
     7081 tggtccccgt tattgtccgt caatcgagga caagattgtc cgttttgcgg ataaggaacg
     7141 ccaccagctt ttcctagagc cagaaggtcg caatacagac gaaatctatg ttcaagggct
     7201 gtcaaccagt ctgccagaag atgtgcagca ggacttgatc cactccatta aaggtttgga
     7261 aaatgcccaa atgatgcgga cgggttatgc cattgagtac gatatggtta tgcctcatca
     7321 gttgcgggcg acgcttgaaa ccaagaagat ttcagggctc tttacagcag gtcagactaa
     7381 tggaacatca ggttatgaag aagcagcagg tcagggaatt gtcgctggta tcaatgcagc
     7441 cctcaaggtg cagggcaagc ctgagctgat tttgaaacga agcgacggtt atatcggcgt
     7501 tatgattgac gacttggtga ccaagggaac tgtagaacct taccgcctct tgaccagtcg
     7561 ggcagaatac cgcttgattc tgcgtcatga caatgctgat atgcgactga cggagattgg
     7621 tcgtcaggtt ggcttggtag atgatgaacg ctggcaggtc ttccagattc acaaaaacca
     7681 atttgacaat gaaatgaagc gtttggagtc tatcaaactc aagccaatca aggaaaccaa
     7741 cgaaaaagtt gtagctatgg gcttcaagcc cttgacagac gctctgactg ccaaggaatt
     7801 catgcgtcgt ccagatgtga cttacgcaga tgcggtagcc tttatcggtc ctgcggcaga
     7861 ggatttggac gccaagacca ttgaattgat tgaaacagag gtcaagtacg agggctacat
     7921 tgccaaggcc ttggatcagg tggagaagat gaaacgcatg gaagaaaaac gtattccagc
     7981 cgatattgac tgggatgata ttgactccat tgcgaccgag gctcgccaaa aattcaagct
     8041 gatttcacca gaaactattg gccaggctag tcggatttcc ggtgtcaatc cagccgatat
     8101 ttccattctc atggtttatc tggaaggacg cagtcgttcc atttctaaaa acaaatcaaa
     8161 ggacagtcac taaggctgtt cttttcttat gcgtgctagc gaaaactagc aatttcttgt
     8221 gatttatggt agaatggcag gcagaggtta gtgatgaaaa gatttcgatt ttcgacaatt
     8281 cactttgtca tgataggtgt cattttattt gggttggtgg ctcttgtcca ccgatttttt
     8341 ccaattggtg ccagtacagt ttttgcgcta ctcatcagcc tattagtgtt gattgcgctg
     8401 tttatttatc aaaaacattc ttatgaattt agtgagatag aacagattga atatctcaat
     8461 aatcaggcca attctggttt gatgatgctc ttggataaaa tgccagtggg agttatcaaa
     8521 gttcgaccag atagtaatca ggtagaatgg tttaatccct ttgctgagct gatttttgct
     8581 caagaaaatg gtgagtttga tcaaaaaaaa ctacgtgaaa ttattgacgt tggtctggat
     8641 gaggagcgaa tttatgcaaa cttttcaggc aagagatacg ctgttaacgt tgattttgat
     8701 caagggttat tttacttttt tgatgcttca tcagagtact cagcgacaaa tagtttgatc
     8761 ggaagccgtc ctgttatagg gattatttca gttgataatt atgatgaact cgaggacacg
     8821 gtatctgatt cacagattag ccaagtcaat tccttcttgg ctcaatttgt ttcggaattt
     8881 tgccatgatt acggtatcta ctaccgacgc ggcacaatgg atcgattcta tttctttaca
     8941 gattatgctg tgttggaaaa attgatagag aataaatttt cagttattga caagttccgc
     9001 gaggaggcta aaaagttaga tttaggtttg actttgagta tgggattggc gtatggtaat
     9061 gaaaatcatc accaaatcgg acaggttgcg ctccaaaatc tcaatatggc tgaggttcgt
     9121 ggtggagacc aggttgtggt caaggaaaat gatgagagta aacagccact tttctttggc
     9181 ggtggttcag cttcttccgt taaacgaaca cgtacgcgga ctcgtgctat gatgtctgct
     9241 gtatcagata agctcaaatc ggttgatgct gtttttgtgg tgggacatcg taatttagat
     9301 atggacgcgc ttggatccgc ggtcggtatg cagtactttg ctcaaaatat tatgaacaat
     9361 gcctatacgg tgtataatcc agatgaaatg gcaccagata ttgcacgtgc tatcaagaag
     9421 ttgagtgatg aaaattgttc taatttgcta acggttgagg aagccatgaa gatggtcact
     9481 ttccagtcgt tgttaatcat ggtagatcat tcaaagattg gcttgacttt ggataaggat
     9541 ttctatgacc aatttactca ggttgtggtg gttgatcatc atcgtcgcga tacagatttc
     9601 ccaaataatg cagttttgac ttatatagag agtggtgcta gttctgcgag tgagttagta
     9661 acggaattaa ttcagttcca gaatgacaaa caccataaac ttaatcgcat tcaatctagt
     9721 ttattgatgg ctggggttat gcttgataca aaaaatttca cctctcgtgt gactagtcgt
     9781 acttttgatg tggctagtta cttgcggact cgtggtagcg atagcttgga aatccagcag
     9841 attgctgcga cagattttga ggaatatcgt caaatcaatg aactaatttt aagtgggcag
     9901 agaattgagt ccaatgttgt tattgcgtgt gcagatgata ctaaagaata cgataatatt
     9961 attccgagta aggctgccaa tacaatattg gacatggcag gaattgaggc ggtattcgtt
    10021 gtaacaagaa atgccaaagg gtatgtatct atttctgcaa ggagtcatag taaaatcaat
    10081 gttcaacgca ttatggaaga aatgggtgga ggtggccact ttaacctagc tgccgctcag
    10141 gtatatgatc agacaatcgc agaagtatgt gaaaagttga cggataaaat ccgcgaagaa
    10201 ataaatggaa attaggagaa cagatatgaa agtaatcttt ttagcagatg ttaaaggtca
    10261 aggtaaaaag ggtgagatta aggaagttcc aacaggttac gcccaaaatt tcttgattaa
    10321 gaaaaatttg gctaaggaag ccacaaacca agcaatcagt gctcttcgtg gtcaagaaaa
    10381 gtctaaagcc aaggcacacg cagaaatggt tgccgaagca gaggctataa aggctaagtt
    10441 ggcagaagaa gctacattag tgaaatttgt tgaaaaagtt ggtccagatg gtcgtacttt
    10501 tggttcgatt accagcaaga agattgctga ggaattagaa aaacaatttg gtatcaagat
    10561 tgacaaacgc catattcaat tggaccaccc aattcgtgcc cttggtttga ttgatgttcc
    10621 agttaaaatc tatcaagatg tgacaggcgt tatcaacttg agcattaaag aggcttaatt
    10681 catatcaata ccatcagtga ggaggtgaaa tcttggcaga gttagatgaa ttgcgggtgc
    10741 agccccagga tattctggct gaacagtcgg tcttgggtgc aattttcctg gatgaaggca
    10801 agttggtctt tgttcgtgaa tacattgagg cagaggattt tttcaagcat gcccataagc
    10861 tgattttcaa ggcaatgatt gccctttctg ataagaatga ggctattgat gcgaccacca
    10921 tgcggaacta tctggtcaac catggtgact tggaaaatat cggtggtttg gcttacttgg
    10981 cggaaatcat tagttccgta ccgacggcag ccaatgcgga attctatgcc aagattgttg
    11041 ctgaaaagtc taatctccgt aaactgattg cccgtttgac agatgctgtc aatcaggcat
    11101 acgagggtgc ggatggctca gatgacatta tcgccaatgc tgaaaaagcc ttgattgatg
    11161 tcagtgaggg agccagtcga agtggtttca agcggattga tgatgtctta aatatcaact
    11221 ttgataacct tgagacacgt gccaagcaga cctcggacat tactggtatt gcgacaggtt
    11281 atcctgccct agatgccatg acaacggggc tgcatgagga agagttgatt attcttgcgg
    11341 ctcgtcctgc ggttggtaag acagcttttg ccctcaatat tgcacaaaat attggtacaa
    11401 aactgggttt gaccgtcgcc atcttttctt tggagatggg tgcggagagc ttagtggacc
    11461 gtatgttggc ttctgagggt gtcatcaatt cgcgttccat tcgtacgggt catttgacgc
    11521 aggaagagtg gaataagtat atggtggctc aggctaattt ggcacgggct agcatttaca
    11581 ttgatgatac accaggtatc aagattacgg agattcgttc gcggtcacgt aagttggctc
    11641 aggagacagg caatctgggc ttgattttga ttgactatct tcaattgatt acgggaacag
    11701 gtcgggaaaa ccggcaacaa gaggtttcag agatttcccg tcagttaaag attttagcca
    11761 aggaattgaa agttccagtt atcgccctca gtcagttgtc gcgtggagtt gaacagcggc
    11821 aggacaagcg acctgttctg tctgatattc gtgaatcggg atctatcgag caggatgcgg
    11881 atatcgtagc cttcttgtat cgtgatgatt attatgaacg aggtgagcag gaagacggcg
    11941 gcattccaaa taacacggtt gaagtgatta tcgagaaaaa ccgttccggt gcgcgtggta
    12001 ccgtggaatt gatgttccaa aaagaataca ataaatttgc aagtatttcc aagagagagg
    12061 atggatagag aatgagtgat gcatttacag atgttgctaa aatgaagcag atcaagcagg
    12121 atattaaaga gcatgagggt cagattgtgg aattgaccct tgaaaatggt cgcaagcgtg
    12181 agaagaataa gcaaggacga attattgagg tctatcaatc cctctttatc gtagagtttg
    12241 aagatccaaa caatactttt gtagaatcct atacttactc agatattttg acagaaaaga
    12301 ttttgattca ttatttggac taggaatgga agcctgtatt tgcaggcttt tttgtatgat
    12361 ttaaccaaat gatatattga ctaaggtaaa gcagtgtgtt ataatattag tacataaaac
    12421 gctttcgaat tcatttttgt gctagataaa aaggagtttg gtatggactt gcaatggttt
    12481 acgtttttag ctctgtttgc ggaggggatt ttgtcctttc tttctccctg tgtactgccg
    12541 attttaccta tctatgttgg tttattagca ggtggagctg aggggaaaga gggagagaag
    12601 aaggttctcg tcaatacgct aagttttgta gttgggattg ctctgacctt cttcttattg
    12661 ggatttgcct ctagtttgct gagtagggtc ttacaagcaa atgctcaatt cttgcagatt
    12721 attagtggtc tattgattgt tctgatggga attttgcagt tgggttggtt caatattcct
    12781 atgttagagc gtgaattttc tgctaaaaat aaggtgtacc aagcaggaaa aaatgtcaca
    12841 ccatttctag ctttcctgat gggttttacc tttagttttt cttggactcc atgtattgga
    12901 cctattctag catctgtttt tatttatgct agcagtcagc agggttggtt gagtagtatc
    12961 ttgctgttgg tctattgtct tggctttatt cttcccttta ttttggttgc cttcttttct
    13021 cagaaaatgt tggctttctt caagaacaat cggcactatt tggcttggac caagcgtatt
    13081 tcaggttatt tattgctctt gataggcttg agtattttaa caggtttctt ccaacatctt
    13141 gtgcgttttt tccagtagga tagaaaggat ttatttatga aaaagttggt atccattgtc
    13201 gtttgcttac ttgtttcttg ttttattttg actgcctgtt cccttttacc attggtcagt
    13261 ccgtcttcta ctgagtcgac tttacaggca aatcaaccgg tcacgctaga tttttcccta
    13321 aaggataagg atgggaagga tgtcaatcta gcagattata aggggaaaaa gatttacatc
    13381 aatgtttggg cgacctggtg tggtccttgt cagagggaaa tccctgaatt ggaggaagtt
    13441 taccaagagt acaaggataa ggaagattat gttttcttgt ctatcacgtc acctaaggat
    13501 gccgagtttg cgaataccaa cccatccgat gtgagcaagg atgagatctt ggagaaggct
    13561 agtgagttag gagcgaccta tccagtctta tttgatacca aggatcaggc gatgacacat
    13621 tttggtattg ctgcttttcc gacacatatc cttatcaata gtgatgggac cctcaaggtt
    13681 tcttttgcag gacaggttca aaaggataag ctggtcgaat tattggaaga aatgcaataa
    13741 gaacgatgag taagtgtcta gagttttggg aaaacaaaaa taaaatacct cattagccta
    13801 agagagcatg aatttgctct cttttttgct tgctcaaaat gttgaaagga tgctttatct
    13861 gatgtcaaat caaattgaaa tcataatgaa tttagataca ttagaaattt ttgaagttat
    13921 tgatcatagt caagatgatt tagaagatat tgaagtcgtg gaaaatgtta ttacacacac
    13981 tgaagaagta caaatatctc catatgatga tttagggaga gtttggctag gaaacggtta
    14041 ttactacaaa ccttctagct tgctttggag gaacgagaga gaaggtatta tccatgaatt
    14101 acgtcctaaa aataaacacg ggagctatcc ctattaccaa cgctgtagga atcatactcg
    14161 gggacatgtt agtcaactaa cttatgaaga agccttgtgg ctaaccttgg agttttatcc
    14221 ggagttgatg aattacatat aaagaaggtc acaataagga gatgttatga cccaagaaga
    14281 aatagataag atgattgaag attggataga gaatggcttt cccagtgaat tgaaacgatt
    14341 gatacctgat gaggagtagt agataaaatg agtagaaaca tatatattgc tagatttcat
    14401 tctcatacgg ctatttattc tttgttgttt tcgacaaata gagatgcttt tgaatgtact
    14461 atcggagtat tctcttctct tgcacaaact acagaagcta ttcagcagtt tgtgacattt
    14521 tccgacatca atagactaat cgaagctaat gacttggtca ctatcacaaa gattgaagat
    14581 tacatgataa cgactattgc agagaaacaa gaagaaggtg aacacaatga ggatggttca
    14641 gtgaaaaact gctatgttga atctataacg attgaaggat acaagttaaa cgagcctagt
    14701 ttttaaagtg aattaaaaca attaatacct gatgaggaga gagaagatga aagtagtagc
    14761 taaccagcca tttctaaatg cgtttgaatg ggatggaaca gaagaaactt ttgaaaaaat
    14821 aaaagaactt gcagccaaca ttaaagatga tgtatatatg cgagatggtc aactagtagt
    14881 ctacgactat actttcgagg aggaagaagt cgtcgatgta ggttgctatg ttgtatttga
    14941 aagctctagg attgacgtat acgtccctat agtgtttgag acattgtata cggaggtaac
    15001 taatgactga tgacttaaaa caaaaaatgg atgggatata cagctggtct gtagatggag
    15061 acaccccccc attcatcgct ttccgaaagc tgttaaagat cgtgcggact atttctcaga
    15121 aatgatggaa gatggtttga ctttcttagg ttgcttagag ttcattttca gtgatgaaaa
    15181 aaccaaacat tatgattttg gagctactaa agattggttg ccaaagtcaa aggaattcga
    15241 ggaatgggaa catggaatcg gaacaacaat gacattctcg caccaagaaa tggcaattta
    15301 cttactattt ccgatgtggg aagaagcaga aaaagatgcc gaaaatcctg atttagtgga
    15361 ggaattaaga tgacaagaca agagtttgta aagcgagaag ttgcgattgc ctgtctgatg
    15421 gtttaccaaa agttaacacg agtagaaagc gagagaaata tcgctgatat ggaatcaaga
    15481 cgtcttattc gttttaaccc atctggacaa gtccaattca aggagattta aagtatgcag
    15541 tttgatccaa ttacagctag tcagtatgag acaacagaac gctattatga attgcctaaa
    15601 gctctttttg aaaatgaatt atatcgtgat atgcgtttag atgtaaaagt gagttatgcc
    15661 atcttaaaag atagattaaa gttatctatc aagaacggtt ggatcgatga tgatggaata
    15721 tactatctga tttattcgaa ctcaaaatta atgaagatat tggactgctc aaaatcaacc
    15781 cttctccgta taaaaaaaca acttgctgaa tacggattaa tgcgagaagt acaacaatcg
    15841 agcagtaaag aaggaacgct tgcgaatcgg atttatctag gaaatctaaa catttcagaa
    15901 cgacctacac cagtctcaaa caacgaatca agtaccccgg tgtcaaattt agaccagggg
    15961 ggtgtcaaaa atagactagg ggggtgtcaa attgacacgg ggcgggtgtc aaaatcagcc
    16021 cctaatgaac ctgaatatag tgaacctaat aatagtgaat atagtagttc tagaaagagc
    16081 gagacaattt ctgacgaaat tcctccctct cctcaaccca atttcacact gacccgttct
    16141 caatctgaaa aatatatccc accaaaatat tattctctcc tccaaacaat agctgatcgc
    16201 tataacggaa agttctgtca gattgaccta tttactggag agactcaaaa ttatcattta
    16261 acccacaagc aaaaaatgat gattggacag tacctagata atgactgggt aacgagtcaa
    16321 gaagtactag atatgattga cagagttcct gttgactgtg agtgtcctct tgcatatctc
    16381 ttgaaaatgc ttgaaaacct caaaacagag agacaagcag aagtaagaag agtcgcccat
    16441 ctgaatgcac aacgctatta tgagggaggt caagcatgac aaaagaagat ctacgaaaac
    16501 aatttgaaaa ctgtgttcac ccgacaaaaa agattttttt aaccttctgt ctcgcatttg
    16561 gaattagcct atctttactc actcgcatct cccgttcttc ggacttacct aagatgggga
    16621 ttttgatagt catatcgctt attattagta ttccattctg ctccaaacac ctcagatatc
    16681 tatacaataa cttagaacgg actctatatc agcttcgtag cgaacagatg gcttactttg
    16741 agaagcacgc agtgaccact accgatgtga tagatgattt cactatgtct tacactcaat
    16801 atgatgtgaa gctctcattt tcttacaggg atcaatcaca gagttttaca gtattaagaa
    16861 ccttaattcc tcagccctat gccaaccaac gattagtaat tgttgcgcac catctctccc
    16921 taccatctga cagaatagga gactatgagg aacggtttga cctgagcgaa ttctctcaaa
    16981 cctacgctac attcattaag aggagagaaa gaaatctagc tctatttatc aatccctacg
    17041 aaaccaacca aagcccatac aagattatct ctgagcttcc agctactgag aaacaaacat
    17101 ttgagttggc tataatcaat cagctagacc ctgcaacgaa tgaaagcaca acgaaaacta
    17161 agtaaaggag aaacctcaaa atagcactac tcatattgtt attcgcttac ttatcaggaa
    17221 ttatcttcct cctgattgaa ctcaaacgag caccactagt cacagatgat gagatgacga
    17281 tcatctcaga aggcgaccaa actataaaat aaccaaacta aaggagacaa agaacatgaa
    17341 acaattaacc gtcttaagcg cacttgcaac cgcagtatta tctaccggcc gtgaagtggt
    17401 ccatgcagaa gaagtaccac acacaactga accaaaacca attgcggaaa caagcgcaag
    17461 ccaacaggct acagtcacag aaaccgacgt ggcaaccgct aaagctgaac ttgataaagc
    17521 taaccaaact gtaacagcac aagaagaagt tgtgaaccaa gctcaaaaag acgttgacac
    17581 agctaaagaa acagtcaatc aagctcaaac cgagctagta gagagtgccg agttggcaga
    17641 acaagctaca ccagaaaata tctctaaggc aaaagcatcg attaaaaatg cagaagctac
    17701 cgttacggaa actagtcaaa acttagaaga caaaaaccaa gcagaatcgg atagccaaca
    17761 agctgtcaaa gaccagaaga ctgttgtatc aactgctcag gtagatgtca atgagaaaac
    17821 acaagctgtc acagaagcag aaaaagatgt cgatacagca caagcgattt tagatggtac
    17881 aggtcaagcg gaagttattg ccaaagctga ccaagctgaa aaacaacttt ctgccaaaac
    17941 agaagctctc actacagcac agacggatct tgttactgct aagcaggcag acaaaaaacg
    18001 tcaaacagct attgaggaag ctgaccaagc tcttgttcaa gctaacaata ctcttgaaac
    18061 aaaaacacaa gtagctaaag ctactacaga acaggcagat gaaacagcta agcaacttgc
    18121 tacagctaaa accatcttcc aagaagcaga aaacgataaa aacagtatca ataccatcac
    18181 actaagttcc gaatatatta cagctttacg tgattatgca ttgaactata cagaaaaagg
    18241 tgcagaagca acagccattt taaaagcctt gtctccagcg ttgaaaactt ctaatcaatt
    18301 taaagcaaat gccaatgata gtcagacaac atatgcagtt aatgagttgc cggcagaagt
    18361 gcgacaagaa ttgtcatggt tcgcctctga attgataaac caagttcgtc aagctttcgg
    18421 aactgctaat gtagtcgtta ctgatcaagc cttagaattt gcggatatgg ttaccgatgg
    18481 ctatgtgaca gataattggt cacgaagtga tgttttaaca actggacatg atgcgaaagc
    18541 tatcaataag gcagctaacc agtttggact tgtgacaaca aattccgtag aagaagcaga
    18601 tgggctacaa tattacgaaa atatgcacaa ctatgcttat gaacaaaaga ctattacact
    18661 tactgaagct aagcgtaagg tctatgagtc tatcgttgag tttatgttta acaactatga
    18721 gtggctacat gctcaaaata ttgcaggttt agaagcaaca ggagtcaatt atttaggtgt
    18781 ggatgtctct actcgtacag gagttactgg ggtgcatttt ctaacggttg atccgtccaa
    18841 actatctact cgtcactttg gcacagagct tgttaatcca aatacagcgc aagcaatctt
    18901 atcacgattc gaacaggcag agcatatgct tagtcaagca acaactacaa acaatcgagc
    18961 gcaagaagct aagaccaaag ccttaaagga gcaggcagag tcacaagcac aagtagttac
    19021 agcgcaagca agtcttacaa aagctcaagc agtaccaatg ttgacaccac aggcacaggc
    19081 taacgtgtta acagcccaag aagcagttaa aaaagcagaa gcagaacaca aagaagcaca
    19141 ggtaaaaatg gctaacctac aggccgatgt caaggttaaa caagcgaatc tagctaaagc
    19201 caaacaaacc ttagcacaga aacaagctat cctagacaaa gctaaagaac aactgtctat
    19261 tgaacaagaa aagctggcac gattacaatc ggacttagaa acagctcaca caaacatagc
    19321 gtttgctcaa acacagtttt ctaccgctca atcaaaactg aaagaagcgc aaacctatct
    19381 catcaagcta gaagaagctc ctgctcgact agaaattgct caaactcgtc tcttacaggc
    19441 tacaaatagc ctaaaggcaa aagaagctat cttgacagaa gcgcttgaaa cactagcaga
    19501 actaaaacag gaagaagcga aagcattgaa ccactatcaa acggtcctat ctgcttatca
    19561 agctgtcctt gaagcacagc gtcaagtaga gttggctaaa cagtatgaga ctattatcca
    19621 tgaagggggt caaccggtcc cggtcgtgga tggaacaggt cgtattacag gctatgtgtc
    19681 agaagttcct gaagtaccgg cacaaacttc caaaccaatc actcagacag taccaacaaa
    19741 aaccacacaa gctagtctac caactacagg aacgaaaact tcttccttga cggtacttgg
    19801 tctagctcta gctagtctcg tcttcttctc acggaaaaag aaagaggggt gagctacttg
    19861 tgacacatac tgcacaacgt attaaaaccc tacgaaaaca agctggatta agtcaacagg
    19921 aactggcgga caacataggg gtactacgtg aaaccatctc aaattgggaa agaggagcta
    19981 gtcgaaccaa tgtagaaaat atagagcgag tcgcaacctt ttttcaagtc cctgtttctg
    20041 atctactggg tatacagatt ccagcagata ccgtacaaaa ataactattt gaccgagacg
    20101 tcataaaact acagcacatt gacaatcaaa tacaaggctt gccctgatac agcgtggcta
    20161 tggataaaag aaaaaagggg gcgagtaacg aactagaaaa ggatatctag tccagccaca
    20221 acacgactaa agccagttga cgtgtcctgc tttagtaaga gtttgcgttt tctcagactg
    20281 taaaacgtgc gcatgaaaca cggcaaagct ctacgggagc tttcggcatg gctgtaaatg
    20341 cagcctttca ttcaatccaa aaaaaggaga attgtcatga atgaaataag accagataga
    20401 gagatgacac tctctgattt acgaaagtta ggaggtcaag ggaatgtaac agcgtatcta
    20461 ttgacaggcg agatcgttac ccttcgttca gattgcggca caacgccaaa aagagcgatt
    20521 gtggatggag agctaaagat agtagaggaa gtgattccat ttcataaact ctatcgacaa
    20581 attagaaccg ttcagcgtga tcatatactg attgcaagaa gagaacgcta taaaaatcaa
    20641 tctatcctac gcttgactgg aaaagggtat caccgtccta actaatcaac acaaaaatta
    20701 aacactgagg taacactatg ttaaataaaa agaacattct ttctatgctt acactatcag
    20761 cacttgtctt gtcaaatagt gttgtagctt tcgcagatga aacaactcca attgattcgt
    20821 ctgcccctgt tgaggtcaca caaccatcta catccacaga accgagtaca gaagtcccaa
    20881 ccccagttga gccaagtcaa ccagtcgaac cgaccactcc aacggaagag ccaacaaccc
    20941 ctgaagaacc aactgtacct gtagacccaa cgctcccgtc tacggaacaa ccaaaggaga
    21001 aaataccgac tcagccgaca gaaccctcta caagaccaga cataccaact ccaccaacgg
    21061 aaaaaccaaa acaggatgtt ccacaaccgg agacacccgc tccccctaaa actgcagaag
    21121 aggcagtgaa taacggcgag agtcaaattg ggactatctc gacagaaacc aagcaaccag
    21181 tagaagcagt cacaccagac aagcctattg tgacagacac tggctatacc atcattagta
    21241 cggataatag ccagccaatc attcgctatg cggacggatc aactgcgact gtttctgcag
    21301 aatcaatcgg cgcagtcgta aacaaggata agaccattag tgtcaaaaca gtggatggac
    21361 agatgaaaac tcttccaaat acaggggaag caaactccct cctatctctg ctaggtatat
    21421 tcctgttggg tatagtgggt tactatcgta aaaaaaaatt aaccagttaa aaccaatttt
    21481 gaccggaatg tcattaaact aagaaaaaag aaagcaaagg gaatacaaaa tgtatcaaaa
    21541 aataacaaca gttaatgggc acggattctt ccgcaagtcg aaagcctacg gacttgtatg
    21601 tgggattgcc ctctttggcg caatggttac tacatctgtt agtgcagaag aaatcgtaac
    21661 cgaaacaact ccagcagttg aggtggttaa tcccaatcct gccaccaacc ttgaaacggt
    21721 ccaagaaact ccatcggctg agagtctagc gacgcaagca gaatccggtc agaagacagg
    21781 tgagttgaca agtcctgtaa cgtctactga gttagaccag attgtgacag atgctaaaga
    21841 agcaggtgtt acagtcacag aagaaagtaa acctgcagtc tatgaaaatc tagatcaggc
    21901 acaggcagat ttgaccaaac aaacagatgt agttaaagaa gcaactgata aacaagaagc
    21961 caatactaca gctatcaagg aagcaatgga taaaaatgcg gaaattgatc gtcaaaataa
    22021 agcagaagca gaacgtgttg cagaattcaa ccaacacgga caggaagcag tagatcaacg
    22081 taatgctgct ggtcaggctg cagtcgatgc acgcaacgtt gcaggccaag ccgcagtcga
    22141 tgctcgtaac caaaaagaac tggatgatcg ggatgcagaa gctgcagatg ttgagcaacg
    22201 taataaggat ggtcaagccg cagccgatgc tcgtaatgct gaaggacagg cacaagttga
    22261 ctcttacaat caatctgaga cggcaagagt tgaagccctc aatgctgaat tgaaagcaga
    22321 atatgaagaa gcagttgcca aagtagctga agttgaggct atcaatgctg aaatcagaaa
    22381 gcggaatgca caagcagcct cagcagcagg atctactaat gctcaacttt tggcggagta
    22441 tgaagctaaa aaagcagaaa tgcaagccaa taccacaaaa gatgggtatt taaagacagt
    22501 tgagcctcaa gagattgttc tgaatcatag ttcagatccg aaagttgctt tttcaaattt
    22561 atcaggtgtt acttttagta cgttgacaat tgaggcagta aatggagacc atgttaggta
    22621 tctatacaat gattattctg attctatacc aacaacatcg aatccaacag aatccctaag
    22681 tgaactttgg gatccatata attctgataa taatggtggc tcatatcatt tagtatcaga
    22741 tacaggagtg ttttcgttga cagctacata tacaaattta gatggtttgt tttttggaga
    22801 taaaccaatt actaaagtgg tatatgatat cgtgggaaag ggtaaggagt ttacttcaat
    22861 tgttttgtat gaggaccctg tatcattttt agagtggaca attttaaatg gaaatgacat
    22921 tactccagtt tcagtatctc caaaatatta tgacatagat ggcaatagat tagatattag
    22981 caatcagtct ttgttatacg ctacatcctt ggaaatgaat ctttctaatc aaggtgcaac
    23041 agagtgggtg gaaggtactg ggggtcaatt cctagactta aacggctcta caattaagaa
    23101 tcatggtgga cgatattatg cagatagtga taatgttaca aatatagata aggaagacta
    23161 ttaccgcagc gttgttttca aaccaacttc aaatgatttt acgttgactt ttggaaagac
    23221 tgcacctagt cctgatgcag ttcaacgtaa ttatatttgg gttggtttac aaacatcatt
    23281 aaaaatcaat acccttcctc caatgcctag cttggtgcag gtagatccaa aaactgaatt
    23341 ggaagtccct gctacaccac cagtaccaac ttatgttact ccaaatctca ggacatttac
    23401 tcctgaagtg tttgttccag aaagttacac tccggaccca tttgtcccag aagtcttcac
    23461 cccagagacc ttcactccag aaacatttga cccaatcact ccagttgtga ttccatatgt
    23521 ttcagtccct gagaaaaaag tctttgaagc aagtatccac cctgtacttg tgaagcaaac
    23581 tccagcaaat agcaaggatg ttatcaatga agatggtatt agtgtcgacg ggaagctagt
    23641 acctaaaggt gcgacggaaa aatggacatt gaccaatgca aacctgaaag caggtcgtca
    23701 agaagtaaca gcttatgtga tgaatgatcc attccctgca ggctttgaga ttgaccgtga
    23761 agcgacagga accaaaaata cggcttggac cattagctat gatgaaaatg gcaaaacaat
    23821 actatcagct acacaagcaa cacttgacta ccttaatgct aatcgtaacc aagatgtagt
    23881 ggttccagtt gcaacctttg tcggtcgtcc aaccaatgat ggcggtacgt acaagaacac
    23941 ctttacaacc ttaatcgcta ctcctaaagg cgaatacaag gtagtctcaa acattcctgt
    24001 tatctacacg ccaggaaatg acccagaaac accacgtact cctgaaacac caaatggaga
    24061 aaatccaact ccagatgata acttgatcca accgaagaag gatgtggtcg atgagaaagg
    24121 aaactctatc aacggtcaat ctgtcctacc aaatactgtc ctaaactatg tggcagaaca
    24181 agattttgac caatacaagg gtattgtggc ttctcaaaat gcgattggaa aaggcttctt
    24241 gtacgtagat gattacctag atgaagcgat tgacggtact tccttagtgg tcaactctat
    24301 cacagccgct aacggagatg atgtccgtga actgtttgat atgattcacg ttctttcgaa
    24361 agacagccta gatgaaaaac tccaagctct tatccaagac tcaggtatta gcccagtagg
    24421 tgagttctat ctctgggtgg ctaaagaccc agaagccttt tacaaggcct atgtccaaca
    24481 aggcttggat attacccgca acttgtcatt caagatgaaa caagactttg taggtacaat
    24541 taccaaccaa acgcaccagg tagattttgg caatggctac tacggtaaca tcgtcacaaa
    24601 cgaagtacca caactcgtcg tccataagga tgtgctggat aaggacggta agtctattaa
    24661 taatggtact gtccaaattg gtgaccttgt gacttacaag ctagaaggtt gggtgattcc
    24721 agcaggacgt ggctacgata ttaaagagta tcgctttgtg gaccttctcc aacacagcca
    24781 cgatgattac caatcggttg tgattgaagc taaggtagac tttacgctac cagatggaac
    24841 aattatcaag aaaggtgatg acttatcatc atatacagaa acagtctaca atgcccaaac
    24901 aggcaaattt gagactcgtt tcaaggaagc gttcttggcg caaattacac gtgatcagac
    24961 attcggtgcg gatggctata tcaccgtgaa acgcattgcc tcaggcgagg ttgtcaatga
    25021 gtacacactt tatgtcaatg ggaaccctgt tatctcaaac aaggctgtga cgaacacact
    25081 tgagccacca aaaccacaag caccggcaaa agtagagaaa gcccaattgc ctaacacagg
    25141 tgatgcggca tcttacagct tgtcagttgc aggtgtagta accttgtttg cgagtctggt
    25201 tggactgcgt aaacgtaaag acgaaaacaa ctagttttcc ctcttgattt atggtataat
    25261 aaatcaaaaa ggagagggag ataaggatga gaaaggaacc tactatggaa gcacaagtga
    25321 caaaaaatgg atataaatac tatatccata aaccacgtaa acccatccca gtaacccctc
    25381 aagccgttcc ttctgaagcg aaatggaaga aagggttgac atggctggga ggagccttgt
    25441 tagttggtct aaagaacctt ccctacttga ttatgcgaac agctattttg cttgtcacaa
    25501 caccactcat gattttgttg tttatcttta acttaatcaa gagcctgatt gtgacagcga
    25561 ttggttggtt tgtgtttaaa ctagtagtga ctttaggata tgcagctata gtggtattgt
    25621 tttattggct cataagacaa ccggttccac aaatgttaga aaaccaaatg gactggttaa
    25681 tgaccaattt ctattttcct catggcgttc cgatttacta cgggtgggaa acaacgatca
    25741 tcgttgtcct tgccatcatt acagccctct ccttaaccat ttattcacgg gatgacctct
    25801 aatcggtcgc ctcactatac gaaagacact aagaaacgat acttagtgtc ttttttcatt
    25861 ttaaaaaaac gaaagcgaga agaaacatga atcaaattgt tgattttatt aataaaattg
    25921 gagacatcgg tggtgttatt ggccttggtt gggccgcctg gggcgcctgg gacctagcta
    25981 ttggtatccg ccgagaatta gaagataagc gggacaaagg agttcaaagc attattttag
    26041 gggctttgct tggagctacg ttaaaagctc tcttttcagc tttggcatct ggcctacaaa
    26101 gtattgtggg ttgataagaa agagaggtag ttgtgatgga taaatccacc cttgagcaac
    26161 taaccatgag tttaaaagac tacaatccga cagcctatca gctaatggag attgtttcag
    26221 actcgatgga gaaagtagct atgatgcttc ttctcctttt tatggggctg aacctactaa
    26281 attggcacca acaactaaaa tcaaatggtg gggagttaac cttacagctg tggtttgagg
    26341 agattattaa gtacgttatc gcagtctttc ttattctttt cctagatgag ctattcgatg
    26401 ccttaacctg gttattcaat gtcattatca aattagtagc taagagcgga ttaaccccat
    26461 ttacctcaaa agctcctgca tttgataact taaatgtatt tttgaaagga tttttcgaag
    26521 caatttacat tgcagtcgac ttcgtcggcc aaatctcaac caaactactc atcctcttgc
    26581 gttccttcac cctctataca tatatgggaa tcggaaagat tgtagtagct tgttatatga
    26641 tggatgccct tcgacccatt tgcctcggtt ttctcaaaca ctatgcggca gccgccttac
    26701 agggacttgt cctcgttgtt gtcattatgc tttatccagc cattgtgacg gatgatttgc
    26761 tgatggtggc acgaacagga gcttggacaa gcgcactaat ggccatagga aagggaatta
    26821 tctacattat catgttattt ggcagccaac gaatggcaaa aagtattatg caggtgaact
    26881 agaggaggat agactatgat aaaaaaatac ctgccgatta taaggcaagt attgatgaag
    26941 attgcaaaaa ggatagtaag actaacattc tgggggctat ttttttcatt acgtatgttc
    27001 ttatgttata gcttatggca caacttaacc aacaaccatc atttgtccct ttttgtgggc
    27061 ttttggcttg cttgtggaac tgattttctg tttacagaat ttttttaagg taatctagga
    27121 aaaagagttc attaataaaa tataatgtct ttttccacca agataaactg tcgatatcgt
    27181 attttatgga atactcacaa tttttcaaga ctttcaaaac aagtctttgg ttgtaagtta
    27241 gtaattgtaa aataaaataa tacaataaga caatgccaag aatacagata actaaaacga
    27301 aaaatacgat aaaaatatca ccaatatttt gtgtagcttg tgaaagccca ttaatgatag
    27361 cttgtttctg tagaggactt acaatgtcat ctatgctttt tataaaaata gtcacaaata
    27421 tatttgtgac caaagcaagc acagtggcta agattccaca gctccatttc gcaaaatcaa
    27481 catacttttt taatgattct tcaatttctt ttataagtaa ttgtctgtct gctttatcaa
    27541 aatcgttctc tatagttggt gtgagtgaat atattttata tttggagtac agataaactc
    27601 ctcgtaaaat tagaaggatt ataccaaagt ttatcagata tcggtatcca tattgcaatg
    27661 tttcgataat gttaggaatg gaaaacacaa tggcagtata catgataatt tgtgccagtt
    27721 gaagggctat taatacaggt gttgatattt gttgttgtat ttttttaaag acaagatgat
    27781 aagtatagct catgatatga ctcccaattc aaatcatttt atttttaatt ataccacata
    27841 aagaaaggag atctatgaca cgcttaggaa gtgaatttct aaaagcctta gataactatg
    27901 agcgccccat ttggggttat atgacattga ggcaagttgt tttattattt ggaattatcc
    27961 tcaccgtcat tctgactgcg gccatgattt ggctccaact accgagcttt ctcatataca
    28021 gtattgccct cttgttactt gctccctttg tgatctttgg caaccatatt gacgagaaga
    28081 taaaagacga actgcgcttc ttcctcgcca aacaagaacg aacctaccaa acagatttcg
    28141 atagaaagga ctatgctgcg aatgcgttta ttcaaccaaa agaaaaccca gaaactctct
    28201 aaagcagaaa gagagcgggc taagcgtctc aggcgaacca tgaccgcctc cacgcaaaat
    28261 accttgaact accaatggct aacaccggat ggtctgatga cagtaacgag tgatacctat
    28321 tctaaaacct atcgtttagg agatacgagt tatatcacag ctacggatga tgagcgtctc
    28381 gatgtcatcg aaaccaatgc tgatattttt caatccctgg atatagataa tgatcttcag
    28441 ctcctgattc tcaatcggag agtcgaaacg accagtcttt cttctcttcg ctatgagtta
    28501 acagaagatg gctatgacga ctatcggaaa gaatacaatg agatgattac ggagcgtttt
    28561 tcggatgatc aaaatacttt taaaatcgaa aaatatgtga ccattaccac gcaagccaac
    28621 caagattatc aggcgaaacg aattctagat gatatggcta atgtgataga aagccaatat
    28681 agtagtattg gtatttcttt caaagagatg gatggcttag agcgtctcct ggtctttcga
    28741 aaactcttaa gaaaagaagc ctttctcgat tttacatacg aagacattgc tatctctggt
    28801 ttatcaacca gggattttat tgcacccaat tatatcaaat ttgataagga ccatttccga
    28861 atagacgatg cctatgctag ggtactatac gtgcgggact atccaacttt cttaaatgat
    28921 aagctgatta aaaatatcct ggatacaggt attgaattag ccatcagtct ccacgctaaa
    28981 ccctatgaca ctgcggctgc tatgaaaaag gtcaaaacag ttcaatcgag cgcaaaacgt
    29041 gaattgatca agagtcaaaa agaagcggct aaagcaggag ttcctggaga gttaattgct
    29101 ggaggcaagg caacggaaac ctctcgagag acagaaaagt ggacagaaga gcttcaagac
    29161 aatgaccaga aaatgttttc tggagtgatg acagtctatc tgatggctga tagtctagaa
    29221 gaattaaacg attacaccga acaggttcaa cgatctgtcc gtaagaatac tgttgaattg
    29281 gataaatgtt acctctatca ggaagaagcc ctaaacacta ttctgccaat tggtatccct
    29341 tttatcaatg ttaaacgtcg ctttatgcgg gatgtgacga ctagtaactt agctacccaa
    29401 gtccccttta ccaatgtgga tttacgctct agtagcccac gtgcggtcta ctatggtcaa
    29461 aatcaattgt ctaagaaccc cattacccta gaccgaaaga aagacctcaa tactccctca
    29521 ggttgtatct ttggtatatc tggttcaggg aagtcagtct ttgcaaaagc tggagagata
    29581 attccgactc ttctacggta tacagaagac cgcattatta ttgtggatcc tgaggcagaa
    29641 tacttggata ttggtcaaga atttggggca gaaatcataa cggtcgctcc aggttctccc
    29701 catcacttta atgtattgga ccttccagat aaagaaaaat tacaggtaga agatagtgac
    29761 cctattggac aaaaggtcaa tctgttatct accttgtttg aaaatatctt gacggaattc
    29821 tcggatgatg atttttccat gattgatcgt gtcaccaaac aaacctatga gacagtagat
    29881 caaccaacct tcaaagactg gcaagccatc ttactcctac aaccagaaaa agtagcgaag
    29941 gaccttgccc taaaggttga accttatacg atgggctcca atgatatttt ctcccatcag
    30001 accaatgtca atatggacag ccgctttatt atctttaatc tcaagcaatt aagcggaaaa
    30061 ttaaagccat tcgccttact ggttattcag gattatatct ggaaccaagt tgttaaccat
    30121 cagggagaaa cgacaacctg gctctatttt gacgagctac agctttactt caaacacagt
    30181 ctacaagcta ccttctttac cgaattgtat tctagaatcc gtaaatatgg ggcgctacct
    30241 ataggcatta ctcagaaccc tgaaacagtt ctctctacag aagaaggaag gaaactagtg
    30301 gccaactgcg aattcttagc acttctgaaa ctcaaacgaa cagatttaga agtcttatca
    30361 cagattatcc atctaacccc atctttagag cgctttgtct tgcgacctaa agctaaaggc
    30421 acaggtttga ttgtggctgg agataccatt gttccttttg aaaatcctat ccccaaacat
    30481 accaagctct atcaattagt cgcaacggat acctgatgag aaagcaggtg aatacgtatg
    30541 tacgatagtg atccaaaaca gcttaggaaa gaaggaaggt taagggtaaa aaaacagact
    30601 aaagagataa aaggtcaggt gccgaaaaca gctcgactag atgccagatc aacctatcaa
    30661 cgggccaaga aaacctataa gcaagctaag aaagactatc gctttcataa aggcccgaaa
    30721 cctactgcga gagctcttta ttttaagaag gggttagata aagcgaaagt agataaacaa
    30781 gtcgctaaaa ccatctataa acgaagtaaa aaggcagata gtacctacat tcccaatcgg
    30841 atcaagcgta gggggaaaca aggtgcctat atcaaaacga gacaagatac ggaaaaggtc
    30901 atccgggaca atgacatctt agatgattgg gtaaagggaa gacaaaacat tcggcagttg
    30961 cgctatcaaa aggcaactag tcagcgagct cttcatagtg gaaaagagct tggaaagtac
    31021 accatcaagc agagctatgc ccagacaaac cgtgcgtata actttaccag gggtcgtggg
    31081 tttactcgaa ctccgaaaga gttttcgtgg gagtataagc tctcaaagag agtgaaaaac
    31141 gtcagacacc gcttggctca aaccaaggca ggaaaggtcg ctaaaggaac gacaactgtt
    31201 ctacgtgttg cttctaatcc tatccgaacg gtcttaacca atcccctagc gataaaatcc
    31261 tactttatcc tctttctttt gcttggcgtt atttctcttt ttatgggcat ttttgccgga
    31321 agtggtcctg tccaacaaaa tgaatttgac cttaatcaat cttggcttca agtgtctaaa
    31381 agagatcgag agaagtccac agacacggtt gactattgga ccaatatcga cgacgttctc
    31441 ttttttatga actaccgtta tggtagtgaa tggaacccag aaagcccctg gaaagaagga
    31501 ttagggggag atgtgagtgc tcttttaggt ttcaatcact attcggatgc cttagatgat
    31561 atttggaatc atctaaacag cgaccctcac aatctaaaaa ccatgctcga tttaaccggc
    31621 tctagctcat ctttacagtg gaccaagcta gggaggactg aacaaaagga atacgaagag
    31681 cttatctccc tctctaaaga agttggacgc tatcctcttt accaagaatt ggctaatccc
    31741 ttctctacag aaaatgaaga cacaagagga cagcccctta tcattttaaa acgctttggt
    31801 tacaactccc caactgaact gtatgataag actcagctaa aggcaaccgc aggtcaaacc
    31861 ttacgagctc ctttagctgg gaaggtggcc attagtggaa atcaggttcg tatttcaacc
    31921 aaggaggcta tctttaccta cgaagctgtc ggaggtatcc gggtaaagga tcagtcaagt
    31981 gttacggttg gagaagaaat aggtaaagtt acaaccgatg gttaccagga aatccgctat
    32041 cagaaaagag aagcagaagc cacgactcga acgcctgaaa aatggacggc agtcaatcct
    32101 ggattctact tttcttcggt cacctataat cagacgacct cggtcctcac caccttagag
    32161 ggagacttgg gacaaaaatc ccgtaggatt cgagattatc tcaaacccaa acttcccaac
    32221 ttaacagata atggcctttc agctatgcta ggaaactttg cgacggaaag caatatcacc
    32281 gcaaagcggg cagaaggaga ctatctcagc cctcctgtgg gggcaagtac cagttcctgg
    32341 gatgacccag cttggttaga tatgggcgga cctagtatat ataacggatc ttatccgaat
    32401 atcctaaagc gaggtttagg tttaggccaa tggacggata cggcagatgg ctctgtacgg
    32461 cataccctac ttcggcaata cgcccaacaa aaaggcaaga agtggtatga cttagaacta
    32521 cagcttgact ttatgttgga aggggatagt ccctactatg tgactatcgt caaagaaatc
    32581 ctcaccagta acgaggatgt gggcacactc acccaacgct ttctccatca atgggaagga
    32641 aatgctggcg acaaactctt agaacgtcaa cacaatgcta aacaaatcca tgccttttta
    32701 acccaacaga ttgttggaga aggtggtgta gcttcttctt ggaatttccc ggaagcctac
    32761 cggtctcaag tgactatttt ccctagtcaa gcagctctca caacacaagc agggagtggt
    32821 tatccacctg gtcagtgtac ctggtatagc tacaataggc ttgtggaact agggtctatt
    32881 acagacctat ctggaagcta cggctatctt ggaaatgggc aagattgggt cagaaactta
    32941 gtggctaaag gttggtccta tagcatgacg ccaacaaaag gggcagtcgt ctctacagtc
    33001 ggtggatttg acggaactcc tcctcagtat gggcatgtag ggattgtgga agctgttaac
    33061 ccagatggaa gttttcttgt gtctgagtgc aactggggcg gtgtccagga taaaattcat
    33121 tggcgagtct gtcgtccagc tccatactat agctttgcga aaccaaaata aaagaaaaaa
    33181 ggaaatagac atcaaatgaa aatgatcgat acagaaaaac tgaaactctt acagctcatt
    33241 ggactaggta tggccgtggt aacggttctt ggcttagtgt tctggtttag tgtggctggt
    33301 agctcgaaag cacccacaaa ggcagaaaag ccaccaatag ccaaacaagt cgaaggagga
    33361 gagttgacac aagagtatat caaatccttc ctcagtgcct actttacaaa gaaggacctg
    33421 ggagagaatc gaaaccgcta cctgcccttt atgacagaag cagcctatac acaagaagtc
    33481 aataccgaag aagaaccaac caatcaaacc tataaaggct atgtggtaga taccaaactc
    33541 aaatctgcga ccatctacat cgatagcgaa aataacgatg tcctcgccca ggtttcctat
    33601 acccaaacgc aattacaaaa gaaaaatgat tataccaatg cccaggtgga tgtgtactct
    33661 caaacgacgc tccgcatcca ctatatcaaa caggaaaata aatacctggt taatcgtatt
    33721 gaaccaattc tcattgtgga taccttaaca gctgatcaaa ccgcaacgct gccaaccctt
    33781 aaccaaccta cccaatcaat agaaggagaa gaaacccatg actaaattag aacatttgaa
    33841 gaatcaacgt cgaaaggcag aagagaaaca agcagattac ctcgctaaag ccaaaaaaga
    33901 ggaggagaaa atcaaagagc tagacaccca aatcatttta gccaaatacg aagaacactc
    33961 cgattattta gcaaaacacc acctcacctg ggcagatatt aagcgccaga tagaagaagg
    34021 aaagctgaaa ggagaaacaa aacatgtacc gtttaaccaa tctgaccttg gacacgataa
    34081 cgacctacaa gaataaggac ttggtctacc aagctctgga tagagaaaat gccaaggtca
    34141 aacatcagga agctcaaagt ctgcttttag tggaagaatt ggataaaaaa ggagtcgttc
    34201 tttttcaaga agagattttt cttccttttg acggcatcgc agatggtcta tttctgagaa
    34261 aggaaaaggt agaagagccg acagaaaagc ctcttccgtt ttggaagagg ggcacgtctc
    34321 aaaaacaaga gccagtcgtt ttatcacgac ctcaaaaaga agaaacggtc caaaaacgaa
    34381 aatccctacg tctgttacct tctcttttac ttgggatggt aacagttagt ttccttgctt
    34441 taggctacac agtgtttctg gttctagcgc agaaagaaga aatgcgtaca ctctctcatc
    34501 aaatagagac cgtaaaaacc atccaaaagg aaagtggaca tctggatgca gtcgtccgct
    34561 atttccttcc tcgttactat tcagaagccg cagaactagg ggattttgtc tcctccaaac
    34621 tccagctaaa ccaccaacca ggtcaactcc agtccgtgat tctggagaat gtcgaacaaa
    34681 cggaagacca gctctatcac ctaacctatg ttctctctct aaaagaagat ggggcaaacc
    34741 aacaaaagcg cctagagcta acacttcaag tagaacccac ctctctctat ggctacttga
    34801 ttgtagacca tcccaaagag acagcctacc catagaagga gaatcagatg gatcaagaaa
    34861 aaacaaccca ttccatagca ctaaaaggga aaataacagt agaaaacgtg attgcggcgc
    34921 tttatacggt agccaaagca ttgcatgata accgccaata taagatggaa catcggacct
    34981 tcgagggaga aacccgcttc aatgacttta tggcaacagc tagtgaaaag gatatggagc
    35041 gcctcctaca tagtgaggtc catttagaaa aactcaagca ttatttagaa gaacataagg
    35101 ttggttttac ttactatcaa aaagaggaag aaaccctcct attctttgaa acaaaaaatc
    35161 gtctcttggt agaaaaagcc ttgaagcaga tgatttcaga cattacaaaa gaccctaaag
    35221 ctaccgaaac attcgcaaac catattcttc gtaaacccca tgagatgaca ccagaagaaa
    35281 aaatcgccta ctataagacc catacggtct atacaggctt gacacctgtt gtcacaaaag
    35341 acctcggaaa ggaaaaagag cgatgaatcg tagaagcagt tggccctact tacttgtagg
    35401 gcttttctta tgtctttgtt tccagtcctt ctatcgctat tacctcctgt cgacggatgc
    35461 cgttcccttt atggggatgc ttcgtatgag gtggttagtg gaacatctag aacaattctc
    35521 cttgaccttc tcacttgaac cacacttcct atatgcaggt ctccttggtt ttcttcttcc
    35581 cttattggct tatgtctcag gagacagaca ggtctatcga acaggagaag aacaagggag
    35641 tgctcgcttt gcgaccctaa aagagatgaa gcgttttgag gataaagaaa tagacaagaa
    35701 catgattttc accaaacgag ctaagatggg tctctttaat tttcgcttag cctatcatgt
    35761 ccaactcaat aaaaatgtga ttgtcattgg tcttccagga gacggaaaaa cctttacctt
    35821 tgtattgcct aatcttatgc agctgaattc taattttgtg gtcacagacc ccaaaggaaa
    35881 cctggttcac gaaactggta agatgttaga aaagcatggc tatgcggtca aggtctttga
    35941 cctcatccgc ctaacaaact ccgatcgctt taatgtattt gagtatatga ggtctgagct
    36001 ggatattgat cgaatctcag aagctattac ggaaggaacg aaaaagagtg aacatatggg
    36061 agaagatttc tgggtacagg cagaactcat gttgcagcgg gcgctcattg gttatcttta
    36121 ttttgattct aaggatccga aaacaggtgt ttctcactac acccctcatt tgggacacgt
    36181 ggccgacctc ttacgccatc tgtatcgaga agatccggat aatccaagcc cagttgagca
    36241 gatgtttgaa gagctagaag aacaccaacc aggtaactac gcctataagc agtggaaact
    36301 ctttcagaac tttaaaggcg agactcgaaa cagtgtcgtt gcgattctat cagctcgtta
    36361 ttccatcttt gatcaccagg atgtcagaaa cttaattagc accgatacga tggaaatgga
    36421 tacctggaac actcataaga ccgctgtctt tattgcgatt cctgaaacca ataacgcctt
    36481 taacttctta tcttctatcc tctttgcggt cggctttgaa gtgctgaccc ataaggcaga
    36541 tgccatttta caaggaaagg ttccaggtta tagcagacag aatttaagac atattcagtt
    36601 tatcttagat gaatttgcgc aaattggccg gattccaaac tttgcccaag ttctttcgtc
    36661 tattcgaagc cgagagatgt ccattaaaat cattatccaa gccgtgaacc aattggagtc
    36721 cctttataag agtgactgga aaacaatctt taataactgc gcaacccatg tctttttagg
    36781 gactaacgac aaggacacca tggaatacta ctcgaccagg agcgggaagc agacgatacg
    36841 cactcgctcc acctcaaaaa cacatagcta tcgcaatggt tcttctggag aaaataagca
    36901 aatccaaggc cgtcctctat tgacaccaga tgaggtggct cgtatcggta ttgaggaagg
    36961 cttagtcttt atctccaagc aacatgtttt taaagaccaa aaagccagtg tctatgacca
    37021 cccaaggcac gtagagattg ctcattctcc acaggatgag aattggtatg actatgttcg
    37081 attgggaaca gatattgacg gactattgct atatacagat gatgtgacct caacatttga
    37141 acagctaact gcagcttaag tagaaaggaa gaagaaatga cagaaacaca ggtaagacta
    37201 ggctattttg aaagtatttg ccaggtcttg gcactagaaa cagaagattt gactgtggaa
    37261 cacccaagta tctggaaact cattcagacg gcagacgagg caaccttcta tcaattggct
    37321 cctcatctct ttctaacaag agaccgaaca gaacctcttc tagcttatcc attagaagct
    37381 acaaaagaag aatacgaacg gtttcgtcga ttactaaaag gaggataaga atggtcttta
    37441 caaaagcaca agctaaggct ctgtccatat tagaggtcgc aaaacgccta ggaatggaga
    37501 tggaacgtag ctcgcacaag gaatattact ggaaagaaca cgactcattt aaaatcaata
    37561 ctgtaaaaaa tacctggaca tggtattctc gaactgggaa atttggggat acgattgatt
    37621 tagttagaga aataaaaggg gggagctata gggacgcgat gaccttcttg gagactggga
    37681 acttcccaga agccaccatt gtagaagaag agcgcaaaca ctttagatat acgttagccc
    37741 cttatgaaca cccctttagg aaagcaagaa gctacctcaa acagacgaga ggtttgtctg
    37801 atgagacgat tgatttcttc ttggaaaagg gagtactggc agaagcaagc taccgagata
    37861 gagatggcaa cgtggaggat gtcctagtct ttaaatttct gaatcggaac catcacatcg
    37921 tcggagcgag cctacaaggt ctctcttctt ttccagatcg tcatgaaggc aagggctacc
    37981 tcaagaaaat catgtatcaa tcagaaggag tcgccggttt aaacgtagct attggctctc
    38041 ctaagcgtct aatcgtagca gaagctccaa ttgaccttat gagctattat gagcttcata
    38101 aggatgaatt agaggatgtc tgtttggttg cgatggatgg tttaaaggaa ggaacactgt
    38161 ctcgctatgc catggaagtt ctccaggaaa gaggagccgc aaaggaagtc gttttggact
    38221 atacacaatc gaaagactta attcgagcgt caaactttct atttgagaca gcccgtttaa
    38281 cgaatttgtt tcatgataac aaccatcagg atttcctcac tcttgcggta gacaatgata
    38341 aggctggtca agactttatt gatcagctac aggagaaaaa aatcccagtt gttgacggaa
    38401 gaccacctct agcaactaat gagaagaaaa tggactggaa cgcttatctc cagctaaaaa
    38461 agaaaggaca actaatggaa catcaaaata aacgctttac tcaaaacaaa gaaattgaac
    38521 cacaccgaaa ggaaacaaag tctaaaaaaa caaagacagc agaagaacat tatttcgatt
    38581 ggattgagag gatggcaact actgtacagg aacagctaca acttccatct cctcccaagt
    38641 tagcatctga attagaagcc gtagtcgaac cgtttatcac aactgactta gatcgactat
    38701 ttgccagacg tctctcctta gcattagata cccaacgagt tgaattttta tctgtacatc
    38761 aagcaatcga ccagctagat aaacaaatca gcgaaagaat gcaagaaaaa gaacttcgag
    38821 aatctgaaat agaagttatt ttccatagtt ctgacgaacc actattatcc cgatactcct
    38881 caggagaaat tattccgtac acagagtttg ttagcattct ttatcctaaa aatgccaaac
    38941 tctttaatga gaccccccgc acaggaccaa cagtttcctt ttcgaatgat ggaggtactt
    39001 ggtttggact tagaactgca gatggccaga tgttggttga gcgtttccgc tacgatgtgg
    39061 gattggaagg ggagtctata tctgatcgac ttaatgggat tctttcatca atacatttag
    39121 agcagataag gcggattgat gcaacttttg atactccttc ttatatcgaa gaaaaccatg
    39181 acatcggcat tgaagtcaag ctctatagca atcaagaata tattgatact atagatttta
    39241 acgatctatt taaccacacg aacttagaga tgatggctaa tgagttggga catacagatt
    39301 tgctaaatcc aataaaaacc tataccgtta ctattgcagg agcgagtctc aatcaggatc
    39361 aagttgatat tttagttaat cgcatgattg aggaaggctt agagacttct tcactaaaac
    39421 agctactaga aagagatgaa tttagccttg aacaatacat tgagcaagga aaagtttctc
    39481 aagatttaga ggttgaacca cagtcttatg ttgttccaaa acaaaaagaa aagttccctg
    39541 atgaagaaag gataatgacc tattccgagt tacgaagaga gaatgaggag ttggttaagc
    39601 gcctagaaaa tcgcattaaa acaggagagt tagaagtaaa ttttgatata gatgcttact
    39661 tgtacgatgt ttttacaaaa cttgggaata gtcatccttt caagtatatt aacgataagc
    39721 gattagaagt tttgtctccc attcagccga ttttagcttc tatcgatgat aagacagttg
    39781 atctatacaa gaataaagga acaatagagc aagactcgct atatcaggcc ttaaaatcgc
    39841 atcaacgtac tcttggagta gatgtatcaa cacgttttat tggagaactt gctatagcag
    39901 cttattctac gaacaagcaa ctggagagtc tttcgagtga gagcttcggt tcttactacg
    39961 gtaatcggac acttgataat ctctctcact cgattgagcg tattttagaa tacccattga
    40021 ttgagacaga ggcgagagac tttgaatatg gctttatgac aattccaaat gctatttacc
    40081 actacttaga ggagcaggaa ggagaggtta ttttagatcg tgctacttta gatactttaa
    40141 tatcacgtat aaaggatcaa ccttttcagg tagtggaaga aaatcagaag gatgtcacga
    40201 tttcaaaagc aatagaaaaa gctcctgacc gaggtcaaga gcctattagc aatgcgggcg
    40261 atttacatcg caatcccgat tctttaggag atatttctcc aaggacagca tcgaagcctg
    40321 ttgtgaacga atcacaacct gattttcctg tcattgctcc cttaaagttt accactaagg
    40381 gagagtggat gtcaactctt aaaccaggtt accatgtgat taccgatggc gaattgaggc
    40441 ggctcaataa atttgcacca ggattacaag caacggctca gtggtatttg aatgaactgg
    40501 caggaagtac aattacctat ctctatcaag atagagacgg cattggacga ttagacgtgc
    40561 aattctctga tgaaaatttt gcacacctga caggtatctc tcctaaagga acggagatga
    40621 agcaagttgt ctatgatttt gcgaatggac agggggatta tggcaatata caagtttcac
    40681 attccatcaa agacaaatcc atggtattgc ctttgttgcc agatattctg tcatctcaag
    40741 cctttgtctt taatgactta tcaacggtag agaagtttca taagattgat ttggaacaag
    40801 caatcaagac agatgatgaa gatttgttgc tggctattcg agatgtagat ggtattgggg
    40861 ttcctgcttc catcatgcga ataaaagaaa aactatctgt agaactagaa ggaaaagaac
    40921 aagttgtcct gggagtctat cgtgaacgag acggcattat cgaacaatta tctatccatc
    40981 cagactatgt aaaagatggt ggacaatcta tgatgaccgt cctacaaaat aaacaatatg
    41041 aaactctctc gacctcacaa acgatagaag aagagaaaaa aataccaagc ctttcttctg
    41101 acagactaca cgatgaaccg gctctaccag tctccataat ggattcggat tcggatggta
    41161 tttcagatga agaagagaaa aaacaaggaa gtgaccctta tgattttcgc tctcaaccag
    41221 ctacgaaaca ccaagaggaa agagaagaac aagtggtaga agacagtagc ctagttgtcg
    41281 caaacttaat ccaaaatcaa gacatcgctg gcttaaaccg tcacctaaaa gaaggcatta
    41341 aagagtatct tgattcggat aaatacaaag actatttaac caagatgagt caactgaaca
    41401 actactccag tcgcaacctt cgtctcattc ttgcccaaca gccaacagct agtcaagttg
    41461 cttcctttaa gcaatggaaa gaaacatttg gtcgccatgt taaaaaaggg gagaaggctc
    41521 ttcgcatatt tgttcctatc acctacatca agaaagatga gaacaatcaa cctatcttag
    41581 ataaggatgg aaaaccagaa atagggacca cctttcgtct caaggctgcg gtcttcgatg
    41641 tcagtcaaac agacggaaaa gagatgccaa aagctgtttc agatgtcaag gaccagctaa
    41701 ctgatcagga ctacggaaac ctctatcgta ccctgatgac aattgcaaaa aacaatcatg
    41761 tttccgttcg tttcgaggaa ttggaggaaa gtaggaaagg atattatgac acagccaacc
    41821 accaaatcgt tttaaataaa gttgggatga ataagtcgca actcatcaaa accttcctac
    41881 atgagacggc tcattctgaa ctccatcaca aggatcatcc acagagggac caactgacaa
    41941 gaagtaccgc agaactccaa gcagaaagtg ttgcgtacgt agttgcgtct tactatggac
    42001 tggatacttc taactattcc ttcggttact tagcgagctg gtcacaagac aaagacacgc
    42061 tgagagacct agaagcacag ctcgatattg tccaacaaga agctaaaagt ttgattgagc
    42121 gcatggataa ggaaatgaag gtcttacgtt tatcccaagt taaacaaacc caacatcagt
    42181 ttgaaaataa attaaatcac tttaaagaac aatcagacaa acagctcaaa gaattacagg
    42241 aaaagaggca agcagaagct acctcaaaaa aggaaaaggg tatctcgaaa tgaccaatcg
    42301 agatgttcca acaccgccta aggtcacctt aaaaacaact catcatcaag gaggaaatgt
    42361 atcatgacac caacacaaga acaccaactc attctcatcc tatctgactt cgtgccagta
    42421 ttggatggag atatagttca agcaattaat ccagaagcac atcgtctgac acgacaaatc
    42481 attttagcca aactcgaaga agaggatgac ttcttactac aagaaccttc attgtctgac
    42541 tggatggaag aaaacaaaag agtccttcaa gaagtcagcg atgaggaatt tcaagaggtt
    42601 ttaagagaaa ccattctcat tacagaactt caaattgggc actcattatt tgacccatta
    42661 acggacgaac aacgaggtca attagcggaa actattcttc aaaacaaaat caaaaatgag
    42721 gagacctcca gtaaaaaatc agttggcttt ttctccaaag caacacaatt tttaagggga
    42781 aactgttaaa taacaatcat ttttttgaga agtggtgctc aaaaaatgag cactaggggc
    42841 ttggggtctt ccccaaaaat gaaaaaggag agaagggaaa aatatatttt tgaccttctc
    42901 tgactttttt aaaaatcgca aatggatatc catttgctac gcttgccgga agaaaggtag
    42961 gggcgggagc ctcattataa aagtatggtt tttaccagga gagagaaaaa taaatggtac
    43021 acaagaaaga aaatagaaaa cgatatattc agaaactatt tcgtctcaca ccagacgagg
    43081 accgacaaat aaaaaagaac atggaacaga tgggagtgga gtctttccag tactatgcca
    43141 aaaatcaatt gatccatggt caattagttc aaattgattt tccagagctg aaagctcttc
    43201 gagtagctat caatcgaatt gggtccaaca tcaaccaaat agccaagcag gccaatgagg
    43261 accaacacac ctctactgag atgttagaac aagtcttggg tcatctaacg gaaattcgag
    43321 aaatggtttc agccaaattg tcaagcgagg agaagcaaag tctccaagcg cgaaaacgaa
    43381 tagtaaggat ggatatagat gaatggtagc tattaaacca ccaatccaaa ttaagactac
    43441 agctaatctg aaacgtgcag tcacctatat actaaaagaa gctaaaacag ttctgcctat
    43501 gaaaacaaaa actgatttcc cctttccaat tgtatcgaaa aatgggaaat tacattttca
    43561 attggtttct ggtcatcaga ttgaggatgt atctattgca gatgaggaaa tgattctcac
    43621 aaaactagcc gcagcctttc ataaagggga tgatgattta aaagaattga cagacaataa
    43681 acaagtgctt gcccatcata ttatccaatc attctcgcca gaagataatc taactccaga
    43741 acaggttcat gagattggtc ggaaaaccat gcttgagttt ctaggaccag attatcaatt
    43801 tgtgattgcg actcatacag atagagacca cctgcacaat catatcatca tcaatacgac
    43861 caacagctca acgttaaaaa aattacgttg gcagaaaaat actctaaaaa atctacgggc
    43921 tatttcagat aaacatgcgg ctaaatatgg cgcaaaaatt attgagccag cgatgaaaaa
    43981 ttcttatacc aaatattctg cctggcgtag gcaaaataat tttcgttatg agttaaaaca
    44041 acgtcttgac ttcctcttga aacattctac ctcgttagaa gatttcaaag aaaaagcaaa
    44101 agctatggat ctgcatgttg atttttcagg gaagtttgtc aaataccgct tattgactcc
    44161 tttggatggg aagctccaag aaagaaatac cagggacgac actttatcca agaaaagact
    44221 ctacgccctt gaaaaaatta aggagagagt ctcaaaaaat caacttacat tttctacctc
    44281 tagtataaaa gaaatgtacc aacagtataa agaagaaaaa gaactggatt ttgaattgaa
    44341 actcgatgta gcttcttggc aagtcgaaca agaaagtcca aaggggattt atcttcaact
    44401 ggatatgggt gccttagata gtggagccat cctgattcct tctcataaag tcgataaaaa
    44461 agaagatggt tcatatacca tctacattaa ggaaaaagat tatttttatt ttctcaatcc
    44521 tgactactcc gagaagaatc ggtacatgat gggggtgact gtagcgagac agttagctaa
    44581 acaaaatggt gaggtgctca ttacaaaaaa tcctcatatt tcatccatgc aagaactggt
    44641 taaggaatat aatttcctag tgcaacatgg tgtgacagat ggagagcagt ttagccattt
    44701 ggaggaacgc tttaatcaga aaatagctga cgtggataaa gaactgaaac gcttggacag
    44761 tcgcttagcc cgttatcata aaatcgaggg tgcacttctt gccttagaaa aaactccaga
    44821 aaatacattg tccgcactcc aactattgga tgagatgggg ctgccaaagg acatcagcct
    44881 atcggatatt tcacaactta tccaacagta tgatattgaa aaaggagcgc ttcaagaatt
    44941 tttcgacgac actttgagag agtatactaa ttaccgtgaa ctgcaagatg tagtccgtgt
    45001 aagagagcag actcataagg ctatgtcgga tgaaaaaatt ctatagatga cttacggaaa
    45061 gaatttccta agtgaggttt gctaaactaa aaaatgctcc ccgttttttc gggaagcata
    45121 gttgcctatg gctgtgtgct taactcagaa ttttttacca agacaaccta aaaaatagta
    45181 tgccactaaa tattgtttct gtaaagacca ttgatgacaa tatctgaaaa ttactttcat
    45241 gggttttcaa tgcttttcaa atccagtaca atggattgta tgagatttga tgaacgtaat
    45301 tttgtgacag aaatggatga atactgtaga caggagtttt taaaacgaat tcgggattat
    45361 gatgattcta tcgctccaac tatgcgacag aatggctata aaagagtcga tgcaacggag
    45421 cgaacagtcc tcttcacttt cggagaaatc accttctcac gaaaccgctg gcgaagaggg
    45481 cagaaaactc tttatccggt agatgattgg ttaggtcttg aaaaatatat gcgttactct
    45541 ccagagctaa tttttcatat ggccaaacat gcctcaaaac tatcttatag agaagtttgt
    45601 agaactatct gtgatgctta ccgtattgga gtaacgaaag atgctgtgtt gaaagccact
    45661 aaagtagttg gacaactttt agaggaaaaa gagcgctatc gcttttatct ggaagaagaa
    45721 caagcccccc aaagaatcaa agcaagtaag atatatctag aaggggatgg tgtgatggtc
    45781 aaaaccactt catcaggaaa tgagcgttca aatactgact taacacattt tcttgtccat
    45841 acgggggtaa agcaagtaac aaaagatcgg tggatactcg agaataaaca tgagattgtt
    45901 catgttaacc atgagaaagc taaagaagag ctattagact atctctataa ccattttgaa
    45961 attacagacc aaactattct tattactaat tccgataacg ggaaggggta taccaagcgc
    46021 acctttcaag aaattaaaaa atcgctaggt attaagcgtc atgaacattt ctgggatgag
    46081 taccatctga atcagaaaat aaagactttc ttcaaaccct atccagaaac gttatacaat
    46141 ttagctcaga aagctatcca gactcacaag aaacctctac tcattactgt gttagatacg
    46201 gtagaatccc tcattgagac agaagaacag tatgagacgt actatagctt tcggcagaag
    46261 atgatgcgca actttaagga taccaagcca gctaaactaa gaaatttatc tcacaagggt
    46321 ctaggtgtga tggaaagcca gcatcgcaaa atcacatatc gcatgaaaca tagagggatg
    46381 tattggtcga ttaagggagc ttgtacgatg gctaagatga ttctcttgga gaggatagat
    46441 aaactggatg aggtattctt tggggattgg cgcaaaacct atcaacccta tcagaaccag
    46501 cgttttagcg caggaagagc caacaagaag atagaagaac cacctaatat cagacgttat
    46561 cactcgggac ataagacagg tcgatggtcg actcatgcaa agtaaaatct aaaaccatag
    46621 aataccgcta aaaaaaatga gattttaggg gctttttcgt catgttttgc ttgtgttttt
    46681 gtatggttta tgatacaata acattataaa gaaaacgaaa aaaggtgcag gagcgctaac
    46741 tcccacacca ccgattaaga caaaagtgga ctttgcttaa tcagtcaaat agtattgtag
    46801 cataaagcaa acaatcacgt caagactgga gcaaagaaaa aactttgttt cggtcttttt
    46861 tcgtaagtga aaactatctg ctttcttagg tttttaaagg gattttgagc tttcccaaaa
    46921 atttagacac aaacgaacga tgaaaaaggc tttacagagc cttttttttg tgctatacta
    46981 acctttgtgc gaaataacag cagggcaaaa tgaagctcgt caacagaagg tcagcaagaa
    47041 gagtaatcgt tgctgtttcg atgaaggcct cctgcacgaa tcaggtttgc ttaaaacgtt
    47101 atttcctaca ataattattt tttattttag gaggacataa cacatgtcac gttatacagg
    47161 accatcttgg aaacaagctc gtcgtcttgg cttgtcattg acaggtacag gtaaagaatt
    47221 ggcacgtcgt aactacgtac caggtcaaca cggaccaaac aaccgttcta aattgtcaga
    47281 atacggtttg caattggctg agaaacaaaa attgcgtttc tcttacggtt tgggtgaaaa
    47341 acaattccgt aacttgttcg tacaagctac taaaatcaaa caaggtactc ttggtttcaa
    47401 cttcatgctt cttttggagc gtcgtttgga caacgttgtt taccgtcttg gtttggcaac
    47461 tactcgtcgt caagcacgtc aattcgtaaa ccacggtcat atccttgttg acggcaaacg
    47521 cgttgacatc ccttcatacc gtgttgaagt tggtcaagtg atctcagttc gtgagaagtc
    47581 aatcaaagtt ccagctatcc ttgaagctgt tgaagcaact cttggccgtc cagctttcgt
    47641 atcattcgat gctgaaaagc ttgaaggttc attgactcgc ttgccagaac gcgacgaaat
    47701 caacccagaa atcaacgaag ctcttgtcgt agaattctac aacaaaatgc tctaagattt
    47761 gtatcgatat tttaaaagcc ctatttacaa gggctttttg tctgtatttg aggagggatt
    47821 atgtggcgta agtatttttt gctagtgcta ttagctattt tggtcgtagg tggggccttc
    47881 tttctatctc aatcagcggc tacgccaaat gaatcagact atgtgaaggc tgtaaagagt
    47941 taccaggcta tttcgataga cgaagtggag caaaaggtcc aagatgagga agaatttata
    48001 ttatacatag gtcgggagac atgcccttat tgtcgtgatt ttgttccgaa attaacagag
    48061 gcagtagagc gatcacgtgc gactatctac tatttggata gcgagtcgga tccgaatgga
    48121 aaaatacaac aatttcgaca gagtcaaggt cttgctacgg ttcctagctt aacctattat
    48181 aaatcgggtg aattatctgg aatacttcgt aaagggagtc aagcaacgct atccgaaata
    48241 gagaattttt tagctcttca agggcagtaa atagttttaa gaatgtatga agtgaatttc
    48301 atacattttt atgtttgtga aaaatatttc aaaacagatt gaaaaacatt tcacaatctt
    48361 gtataatact aatatcagat aaaaattgga ggtttatatg aaaaagaaag cttggttagg
    48421 cttgttgatg agtctacttg ctgttttgtt tttagtggcg tgtggaggca agtctgaaaa
    48481 gacagctaca tcttcatcat ctacgacttc ttcttcatca gaagaagctg tttcaggtgc
    48541 atctgagaaa gtttatacag atccatctga gttgaaagat agctacgatg ttatcgttgt
    48601 tggttcaggt ggtgcaggta tgtcagcagc tatctcagct aaagatgctg gtgctagtgt
    48661 cgctctcttg gagaaaatgc ctgtaatcgg tggtaatacg gctaaatcat cagctggtat
    48721 gaatgcttca cagactaaat tccaagaagc ggaaggcatt gctgattcaa acgataaatt
    48781 ctacgaagaa acgcttaaag gtggtaaagg gacaaacgat cctgaattac ttcgttatct
    48841 tgtagataac tctgctagtg caattgactg gttggatgga atggggatta ctcttagcaa
    48901 cctaactaca actggtggta tgagcgagaa acgtacccac cgtcctgcag atggttcagc
    48961 tgtcggtggc tacttggtaa atggtcttta ccacaatctt gttgaacgtg aagtaccaat
    49021 ttttgtcaat gcagatgtta caaaactcca agacaaggat ggggctgtga caggtgttga
    49081 agtgaagatt gctggtgaaa cgaagaaaat ctcagctaaa gcagttgtat tggcgactgg
    49141 tggtttcggt gcagatttgg aaatggttgc taaattaaac ccagcattga aaggttatgt
    49201 tacaaccaac caagaaggtt caacaggtga cggtattgcg cttgctgaat cagaaggtgc
    49261 agcaactgtt gatatggaac aaatccaaat tcacccaagt gttgagcaag aaacttctta
    49321 cttgattaca gaggcagttc gtggcgaagg tgctatcctt gtcaactcaa aaggtgagcg
    49381 ttttgttaat gaattggaaa ctcgtgataa agtttctgca gctatcaata gtttggatcc
    49441 aaactacgct tatgttatct ttgatgatgc cttgaaagat cgtgtgaagg ctattgctca
    49501 atacgaagaa aaaggacttg taaaaacggg tgctacactt gcagatttag ctaaagaaat
    49561 tggtgtacct gcggacacac ttcaaacaac tcttgatact tggaacaagg ctgtggcaga
    49621 taagaatgat gcggcatttg gtcgtacatc aggtatggac catgctttga acactggttc
    49681 ttaccatgcc attaaagttg cacctggtgt tcaccataca atgggtggtg tgaaaatcaa
    49741 taccaatact gaagtattga aaacagacgg ttcagcaatt tctggtcttt atgctgctgg
    49801 tgaagtaact ggtggtgttc atggtcaaaa ccgtattggt ggtaatgcag tagcagacat
    49861 catcgtattt ggtcgtcagg ctggtgaaca agcagctgga tttgctaaga aataaattgt
    49921 agacaaaaga ggctcggcag aaagaaggtc gagcttcttt ttcttgtccc tctattttta
    49981 agatgatata cttttaaggt atgaagaaga aaatagtatt attgttagga gtaattgcag
    50041 tcattgtttt gatttggtct gctattgctg gtcagcgtca gcaatcctat gccgaggctg
    50101 agttaagaga ccaggataaa atctggatta tcactgattt gcattattta tcacaggatt
    50161 tatttgatga tggagaggca ttttcctata tagaaaaaac agctgctggc aaggatttac
    50221 gttatggaaa agaacggatg gaggctttgg ttgagcaggt tgagcgtgaa catccttcct
    50281 tgttactagt cagtggggat ttgactctaa acggtgaaaa acagagcatg gttgagttgg
    50341 cgcagtactt tacacagatt gaagaaaaag gaacggaggt tttggtcatt cctggcaacc
    50401 atgatattgc cagtggatgg gctagagcct ttaaaggaaa tcagcaggaa gtgacggatc
    50461 aagttaccgc tcagcaattt gaagatctct ttgctgataa cggctaccaa caagcgagca
    50521 gtcgtgatca agcctcattg agctatctgg ccaagccatt ttccaatgct tggtttctga
    50581 tgatagacag caacatctac tctgacggct acggaaaagg agctcctcca accaatggac
    50641 gtatcaaaaa agagaccttg gattggatag aagtacaact taagtcagct aaggaagctg
    50701 gagtgagcct gatacctgtt gtccatcaca atgtcttgca acagcatgct atgctctcaa
    50761 aaggctatac tttggataat gctgccgatt tgaagacctt gttcaatcaa tatggcattc
    50821 aatttggttt ttcaggccat actcattctc agaatattgt tgaagaagac cttggacaag
    50881 ttaactatac tgaagtggtc aatggagcgt tttctattta tccggctatt atcggtcaat
    50941 tgagccttga tgatacaagc attcactatc aaaaaactca actagatatg gcttcgtgga
    51001 cagaaaagca ccaacctagt gatccaaatt tgcaggatca tctaagatac ttacaaaccg
    51061 tctttgacaa tactacggat atcatggtcc acaatgtgtt aaacgatgaa cggtggtatg
    51121 atggcgagac ggcagatgct atttcacaat ttatcatgcc ggctaaccgt gcttattttt
    51181 caggagaaaa actagatcag acttggctag atgagacggt atttccaagc caggcttatc
    51241 agaccttgca agcagcatca ccgagaagtt tcttggctga ttatcttgac gtgattataa
    51301 aacgtagtca aagtcgagat gtggaaaaac tagcaattac caccaaaaac tgatagtagt
    51361 tatccacaga atattctaga aatccacaac ttgtccacag gttgtgaata agttggcctt
    51421 gaaaaataat tatcctctgc aactttcctg aaaatgtgat aaaatagtaa caaattgtgt
    51481 caaatggaga gaaagatgac cttactaagc attgctattc cgagttataa ttcagaggcc
    51541 taccttcatt actgtgttca ttcccttgta atgggtggtg acaaggttga aattctgatt
    51601 attaacgatg gttcgaccga tcggactcag gaaatcgcag aggaacttgc taatcaattt
    51661 tcgaatgtac gagctattta tcaagagaat aagggccatg gcggagctgt taatacaggg
    51721 atacgtgagg ctaagggtaa gtactttaaa gttgtagatt cagatgactg ggtcgatacc
    51781 agggcctatt tgaagatcct agagagtttg caggctttgg aagatgaaaa tacgccagtt
    51841 gatgccttta tctccaactt tgtttatgaa aaagagggac aatctcgcaa aaaatccatg
    51901 tcttatcagg atgttttacc agaaaatcgg atttttggct gggaagatgt gggggcattt
    51961 tccaaggggc aatacatgat gatgcattcc ttgatttaca ggacagattt gctacgggag
    52021 gttggtcttg ttctgccaga gcatactttc tatgtggata atattttcgt atttactcct
    52081 ttgcaggctg tgaaaaccat gttctatctg ccagtagatt tttatcgtta ctttattggg
    52141 cgaaatgacc agtctgtcaa cgaatccgtc atgattaagc gcattgacca gcagttaaaa
    52201 gtcaatcgga ttttagtaga taatctagat ttagatgtca ttgaaaatcc tgatttgcga
    52261 agttacttgc ttaatcatgt agaaattacc accattatct cctgtgctct tctcaatcgt
    52321 gctggaacag ctgaacatat gatgaaaaag caggaactct ggcactatat tcgggataat
    52381 aatccagctc tatttaaaat cgttcgaaaa gggttactcg ggcagttgac caatctttac
    52441 ggttacccag gtcgaaaaat ttccaatgca gtttacaaga ttgccaagag aatttatggt
    52501 tttaactaaa actcagtttc ggctgggttt ttctgttata atgaatagaa gaaaaaacgc
    52561 ttacaaggag aaggtgcatg caagaattag gacaaacagg attagaagtt tcacgaattg
    52621 ctttaggctg tatgcgaatg gctagtttga gtgggcagga aacagcccag gtcttgaaaa
    52681 cagtggttga acaaggtatc aacttctttg accatgcaga tatttatggc ggaggcgagt
    52741 cagaaatccg ttttgctcag ggggcaaaat tggcgggatt gaaacgtgag gacctgcttc
    52801 tccaatcaaa atgtggcatt cgcaaaggtt attttgattt ctcaaaagag tatattttgg
    52861 aatctgtgga tgggatttta aagcgcttgg atacggaata tcttgatgtt ttggccctcc
    52921 accgtccgga tgctctaatg gaggcagagg aagttgcaga agccttttat ctcttgaaaa
    52981 aagcagggag ggttcatcat tttggcgtca gcaaccaaaa catttaccaa atggagttat
    53041 tacaatccta tctcgatcaa ccgcttgcag ttaatcaatt gcagctctct cctgctcaca
    53101 cgcctttgat tgatgctgga ctacatgtca atatgaaaga tgatgctgcg actatgcggg
    53161 atggtggact gattgattat tgccagctta aaaaaatcac tatccaagct tggtctcctt
    53221 tcttgattga tttgcaacga ggtatttttg ccaatcatcc tgactatgct cttttaaatc
    53281 aaactattgg ggaaatagca gagcgataca atgtttcaca tgaaacaatt gtcgtagctt
    53341 ggattttgcg tcatccagca aagattcaaa cgattgtggg ttctatgaac ccagaacgct
    53401 tgacaaagat tgctcaagcg agccagatta ccttaacgag accagaatgg tatgagattt
    53461 acagaagtgc agggaacatt ttgccatagg aggaatgtat gaagtgggaa ataaaaacat
    53521 ttgaacaact tagtttacaa gaactttaca ctatcttgac acttcggccc gatgtatcag
    53581 tcatttagtt tttcttttat tacttcgtta actcgcttta ccgtacttta gtacagcttg
    53641 cagctcgttg cctcgtacta aaagtaaact aaaagactta atttgtgctt gaacaggcct
    53701 gtccctatcc agaaattgat ggaaaggatc caaactgtct tcatctttta ggaacagaca
    53761 atggggagtt agtggcttac ttgagaatct taccagctgg tttaagttat gatgaagttt
    53821 ccatcggtcg tgtggtcatc aagccaagtc atcgtggcaa aggattgggt cggccaatga
    53881 tggagcaagc tatcgcttac attacaaccg agtggaagga aagtcagatt aaaatcgggg
    53941 cccaagccta tttggaaaaa ttctatcaat cgcttggttt taagtcagtt tctgaagtat
    54001 atttggagga tgatatacca catttggata tgttataccg taaaccagtc aactagggct
    54061 ggttttttga tttttctcgg caatttcccc caaaaatcag ccattttatg gtagaatgat
    54121 aaagtataaa atcagtaaaa gaggaagaaa atgaaacgtt ctatgtacgc tggacgtgtt
    54181 cgtaaggaac atgtcggaca ggaaattact ttgaaaggtt gggttggccg ccgtcgtgac
    54241 ttaggtggcc tgattttcat tgacttgcgt gaccgtgaag gcattatgca attggtgatt
    54301 aaccctgagt cagttgaggc tgaagtgatg gcaaaagctg agagtcttcg ctctgaattc
    54361 gttatcgaag taacaggaac ggttgttgag cgtgagcaag ctaacgacaa tatcccgaca
    54421 ggagctgttg aactgcaagt aaccagcttg acagtgttga acacagctaa gacaactccg
    54481 tttgaaatca aggacggcat tgaagctagc gatgataccc gtcttcgtta ccgttatttg
    54541 gatcttcgtc gtccagaaat gcttaacaac ttcaaattac gtgcagcggt aacccacagc
    54601 attcgtaact acttagacga gcatgaattt atcgatgtgg aaacaccaat gttgaccaag
    54661 tcaacaccag aaggtgcgcg tgattatttg gtaccttctc gtgtgtcaaa aggccatttt
    54721 tatgcccttc cacaaagtcc acagattact aagcagctgt taatgaacgc tggttttgac
    54781 cgttactacc aaatcgttaa gtgtttccgt gatgaagatt tgcgtggtga ccgccaacct
    54841 gagtttacac aggtggactt ggaaacctca ttcttgaatg aggttgaaat ccaagacatc
    54901 gtagaaggct tgattgctaa ggtcttgaaa gataccaaag gaatcgatgt gaccttacca
    54961 ttccctcgta tggcctatga ccatgctatg aacttctatg gttcagacaa gccggatact
    55021 cgttttgaga tgcttttaca agacttgaca gatactgtca aggaagttga cttcaaagtc
    55081 ttctcggaag cacctgttgt aaaggctatt gtggtcaaag gtgcggcgga cagctactca
    55141 cgtaaagata ttgataaatt aacagaatac gcgaaacaat ttggtgctaa gggacttgca
    55201 tgggttaaag tagacaaggg agaattagcg ggcccagttg ctaagttctt gacaggtatt
    55261 acagaaaact tgacagcaag tttacaactt gaagacaagg acttggttct ctttgtagca
    55321 gatgaattgg aagttgccaa taataccctg ggagctttac ggaaccgctt ggcaaaagag
    55381 caaggcttga ttgacgaaag caagtttaac ttcctctgga ttgtggattg gccaatgttt
    55441 gagtggtctg aagaggaagg tcgctacatg agtgcccatc acccattcac cttgccgacg
    55501 gaagaaacag atcatcattt ggatggtgat ttggcgcagg tgcgtgcagt tgcttacgat
    55561 attgttttga atggttatga attgggtggc ggtagccttc gtatcaacca aaaagacatg
    55621 caagaacgga tgttcaaggc gcttggcttc tctgctgagg atgcccatga gcagtttggt
    55681 ttcttgctag aagctatgga ctacggcttc ccaccacatg gtggtttggc tattggtttg
    55741 gaccgctttg tcatgttatt ggctggtgag gataacattc gcgaagttat cgcctttccg
    55801 aagaataaca aggcatctga tccaatgaca caggcaccga gcacggttgc atcagcacaa
    55861 ttagaggaat tggctttaga cattacactt gaaaatgaat aaatttttca gaaaacagcg
    55921 tgtacgcttt ttaagaaagg ccagaaagaa taagttttgg tcggtcattt tgggaatttc
    55981 tcgggaaaaa tatgctgaac ggatatcggg gtccattatt tatggactcc tatctagtat
    56041 tgcagtcaat tttttctttc gaccagggaa tgtttattcg tctggagtta ctggtcttgc
    56101 acagattgtt tctgctctgg cagcttctta cgctggttgg aatgtaccga ttgcggtggt
    56161 ctactacggc ctgaacattc ccttgcttat cttagcttgg tataaaattg gttataaatt
    56221 tactatcttt acctttatta cggtatcctt cagttctttc tttatccaat ttatgccgcc
    56281 agttaccctg acgacggatc cgttagtcaa tgctattttt ggtggtctca tgctgggaac
    56341 tggaattggc tttgcgctta ggaacaatgt atccagtggt ggtactgata ttgtctctat
    56401 tattattcgc aagaagacgg gacgacaagt tggttccatt tccttgattg tcaacattat
    56461 gattatgttg attgcaggga tgacctttgg ctggcaatat gccctgtatt caatggttgc
    56521 gctgtttatc tccagccgca tgacggatgc aatctatgtc aagcaaaagc ggatgcaggc
    56581 tatgattatt accaatcaac cagaacgagt tatcaaaaaa atccataaaa acctaaatcg
    56641 cggtgtaacc attatcaatg gtgccgaagg ggcgtataac catgagcaaa aaacggtact
    56701 gattactatt atcacacgtg cggagtttag tgaatttaag caaattatga aaaaagcaga
    56761 tcctcaagcc tttgtatcgg tagctgacaa cgtcaatatt attggtcggt ttgtggaaag
    56821 cgactgattg acaaacacta catgtaggag taaaatagta tttacagtct acatgtagtg
    56881 tttttattat aaagaggaaa tgtatgaaga agaaaatata tttggtttat atcagtttga
    56941 gtggcaatac agagagtttt gtgaaacgcc taaagtcttt ttttcagttt caaactgact
    57001 gggagattga gctagttcat gtcaaagatt tggtcaagca ggacatttct ttttaccagc
    57061 tagatgcacc ctttgtcgcc tttttaccaa cctacttaga aggtggaaat ggagtggaca
    57121 atggagatgt ggagattttg accaatcctc tcggagattt tatcgctttg gggaccaatg
    57181 cagagctctg tttgggtgtt gttggttcag gtaaccgcaa ttttaacaac caatattgtc
    57241 taactgctaa gcaatatgct gagcgattta attttcctgt tatagacacc tttgaactca
    57301 gaggaatgca gaatgacatt gaacgcattg gtcggaagat aatggaattg atgtaaagag
    57361 cctcaactca gctttatgct gggttgtttt tttggtcaca caaaaaaact caccagcgtg
    57421 accgatgagt tttaaggaga ttatgaaaaa tatttaggat tgactatagt atacctcaga
    57481 ctatatcgtg tttcatcggt ctaaagtcct atttgtcttc taaaatgcaa atactctgtc
    57541 ctgcaatcgt gatttcttgc tgatcacgct cttcgactgg aggatagttg tagagaactg
    57601 ccttatcttt ttcacgttca taggtaaagt cgctatccgc aaagttgatg ataaattgaa
    57661 tggtcttttc ttcacttgtc acttgatagc gaagaacata ttcagttaac cagtagaaat
    57721 cacaagtttc ttggatactt tcgtagttat cctggctgag tattggatta tttttgcgga
    57781 aggtaattaa ttcctgaatg aactcgatat gttccttata acgaatagct cgtgtccagt
    57841 ccagacggtt gatacggtca gggacattgt aagtattatc taattcatct tttgtacgga
    57901 aaaattcctg cccgctgtga atgaaggcca taccctgaga gattaagatg agctggagac
    57961 caaaacttgc agcacgtttc tgctgttgag gtgtccagtt tggattctca atatggaaat
    58021 agtcaaatgc tgtagcatta tcatggcatt cgatgtagtt gagggactgt tgaggcgtta
    58081 agaaatggct taatcggcta ccagtcagga gatgttgtac cttttcgtgt aattgcttat
    58141 ctactagacg gtttggattg agcaagagtt tcttaaaggt atcacggtaa tcgtcgttga
    58201 agaagctgat ttcaggtaaa tgctctgcat tgtactggtg agccagcttt tcaaattcga
    58261 ggcctgttgc cattttccat ccttcaccat agaggtagac atttgggtga atggcagata
    58321 attcagtttg aatctggttg attgtttcgc tatctaaaat acccataagg tcgaaacgga
    58381 agccatcaaa accatagagt tctagccatt ggcgaaggga ttgtttgatg tagttgcgga
    58441 ccatactgcg ctcgctggca acgtcgttac cgcagaatgt cccgtctgtt cgcatgccgt
    58501 ggtcatcata gcgatagaag tagcctggaa cgatgagctc aaatgcgtac ttttcagcat
    58561 gatagacgtg gttgtaaaca acgtccataa taactgaaat atctgcatca tggtaggcct
    58621 ggatagtttc ttgtagctct agaatacgtg cgtaaggatc gtttggttgg ctagaatagg
    58681 aaccttctgg cagattgtat tgcatagggt cgtagcccca gttgtaaaca gcttggggtt
    58741 tattttcatc cacactacca aaatcataaa caggcaataa ttgaatatgg gtaacgccta
    58801 gttctctgat gtaatccatt cctagcttca ttccatccat ggtaggagac tctgtcaatc
    58861 cgagaaattg actgcgatgc ttgaaaccag cttctttttg ccatgagaaa tctcggacgc
    58921 tcatttcata gataatggcc tgagagatag gtcgttgggt cttagcacga cgaattttat
    58981 gaagtttatc tggattgata acgtagctgt cacctgagtt ggctgtggaa gacagggcgt
    59041 agggatcgtg aacggaaatc cattcaccgt ttactttgtg gagatagtga tagctgtgcg
    59101 cttctaggtc tccttcaaca gtaatttccc aaactccttt tgctccctta gtcattgcat
    59161 gtgggtttcc ttctagaaca agaaaaactt gcttagaaat aggtgcccat aacttaaagg
    59221 ttgttgcctc tggtcgatag gttgctccca agtcttgccc attatatgta taactttgtt
    59281 caaaaagtgt agagcgaacg atatgaccat agccgagttc agctttatta cggtcctggt
    59341 cgtagatggt atagtccttg tccaatgtca atgcatggag gctggttaga taatagataa
    59401 cgagattgtc tacttctaga caggaatgga taaaaagttg agacgtagca tcatttgatt
    59461 cgagtgagaa gctcatatgt tcggagtcga atcgtttttc catgaccaag cgaatagttg
    59521 ctacatcatc aaggaatgct tggaattgtc gtaatgccat gagccaaaag gctcctttct
    59581 aagttagagt tcggtgatgg tatgtggaat gacacgtcgg tagcagactt gcttgtcgtc
    59641 cttgttgtca ttgatgattt ggtgcagagt attgaatgcg acgcgtccta gcttaatagc
    59701 gtggacgtca acgtaggctt caatatctag ttttggcttg acggagtcaa aagaaatgat
    59761 aggaagtttg actccgactt cgttgagata tttgacaaca ccttcggcaa cggaagtgtc
    59821 ggttgtgacg attgcatcca ggtcttgttt gagtaatttc ttagaaattt tataggcact
    59881 gtcttcgaga aggaagccag acacaaactt gaccttgttt tcatccaggg gaatattgtg
    59941 cgatttaagg gcgttcttgt aaccagtata acggtcttga gatacgacca actctttgtt
    60001 accagcgacg aaggcaatgt ttttgtaacc tttattgatg aagtagttgg tagcttcaaa
    60061 gccggcctgg atattatcat tatcaactag tgatatgaat ggagaatccg ccttaccaag
    60121 aatgaggaag gggaatttgt gttggatagc caattgtacc aatggatcgt cgggcttgga
    60181 atagaggaag atgaggccgt ctactcgttt gccgtagacc atctgagaaa ttgcttctag
    60241 acgttgttct tcattctttc ctgtggagat ttggatggca taattatgat ctgccgcaac
    60301 ttgagaaatt cctcgtaagg cagtagggaa gaaagggttt tgatagaaaa catccgagtc
    60361 atctggcaaa accagtccga taacctgtgt atagctagaa actaggcttc gagcgttgag
    60421 gtttggatgg tagttgagat ccgccatggc tttccgcacc aagtctttcg ttttttggct
    60481 aatggcagag ctattttgaa tgacacgagt aactgtagat ggcgagacac cagctaattt
    60541 agccacatct ttgatggttg cacgcatata gacctcctag atttcatctc tgaattttgt
    60601 tttgaaaaat acccataaca agcatagcac aaataggatg ttttgtatgg tcagaagggt
    60661 agtcacaggt tgaccaaata gtccaattag acaggctata agagtaggca ggcccagaca
    60721 gttgagagca aaattatagc actctgcaaa cgtttcaaaa tggaagaaac gagacttttt
    60781 agtcaaaaag aggaagaagc tggctcctag taggatgaag agtaggtttg ttgttaaaat
    60841 aaaggtcgaa ataagagtga tggacagtcc gacagctgct cggttggctt gataccattt
    60901 tttagagatg gttgcagtca aggtctcctt actagcaaaa tcgtcagtat tcaaaccttc
    60961 ataagtcaat tcgcttagaa tatcacttcc tttacgaata gtcagagact gattggcgaa
    61021 ttgataagta aagtcagaac tagagctaac ggtatcacca aatgtcactt gctcccagtt
    61081 agtatttcca gtataggtta ggtggttgtt ttcgatgact gcatgttgac ggaggtcatc
    61141 tacgacctga tctgtcagag gtgcatagat accttctacg aaattttcta aaggataggt
    61201 ttcgagattg acagtctgta gggagctcgg aatgagcaag agcgccacta aaaaaagcgt
    61261 tgtaaacaac cgttgccaaa ggttcattag tctacgattg gcaaacatat ttcttggaga
    61321 gaagatacta gaaaaatagg aaaaaggata tgggagcatt cgttgaacct ttcataaata
    61381 tcaatgtttc ccctgaaaag ggaaaaggtg ggacagggtt atcccttgtc gccaccgctt
    61441 gttaaaccag atacaaagtt cttttgtagg aagaagaata ggatactgat agggagggca
    61501 ataagaatgg cacctgccgc aaagtaggca atcttcatat tcttcacatc actgatgaag
    61561 gtttgaaggc cgacagctac agtatagaat tctttttcac gaagcaagaa tttggatagg
    61621 atgtaatctc caaaaggtcc catgaaggcc cagagcgctt gtacagcaat cattggacga
    61681 acgagtggga ggacgatttg ccagaaacgt ctgaagtgac cggcaccgtc tagttttgca
    61741 gattcatcaa gtgagattgg caccgtatcg aagtagcctt tcatgagcca agcgttcatt
    61801 gggataccac caccgacata aaggaagatg aggaaccagc tttggttgag cgcattgagc
    61861 atgagggcca tgacgaagaa ggcggtaaga gcagccatgg ttggtaccat ttggataatc
    61921 aagaagaaga ccaaactctg cttacgagcg atgaagttat agcgactata agcgtaaccc
    61981 gctagtacca ctatacttgt ttgaataacc attgtcaaga gagcaatgat aagcgtattg
    62041 aggtaccagg ttccgtatag agtctcgcta aagagcttgc tgaaattgtc tagtgtaaag
    62101 ttgatattgc tatccaattt gaaggcaacc acgttaccag acttgaaggc ggacatgatt
    62161 gtaatcaaga gaggatagat gatgataaca gacagaacaa tcagatagag ataggttaag
    62221 gtctgattga gtatgcgtct agtttttaca gatactttca tcttatacat cctccatttc
    62281 aaaagcattt agttttttga aggcaatcat ggaaatactg atgacaatca ttgagataat
    62341 caatgtaact gctgccgcca ttgagtattg aggtgatgta cctgtggtta atttataaat
    62401 ccatgaaatc aagatgtcag ttgaacctgc tccaccaccg acgctaccag gaccaccatt
    62461 gttgaagagg tagatgatag agaagttgtt gaagttgaag gtgtattgac tgattagtgt
    62521 tggagctgct actgctaaaa tcatcggaag ggtgatgtta cggaattttt gaatggcact
    62581 tgcaccatca atgtaagcag cttcatacaa gtcgtttgga atggattgca aaatacccaa
    62641 ggtcaaaaca tagatataag ggaaaccaag ccaagcctgc atcataatga gggcaacttt
    62701 ggtccagaat gggtcggtct tccaagggat aaggaaatta tcgatgaatg gtaggaattt
    62761 gctcaggaat ggcaatacct gtgtgttaat agcgccgaca ctatcgttga acatgttact
    62821 aaaagtcaag atagttacga aggcaggaac agcccatggg agcaagaaga taacaccgaa
    62881 gatgcgtttt cctttgatga atggctgatt tgcgatgatg gctgtcaaga taccgataac
    62941 aatttgagct gttgaagcgc agagtgccca gataattgtc cagccaagta cagaaccaaa
    63001 tgcggtacgg aatgtgctta gtttccagat gtttgtaaag ttggtaatac caatccaatc
    63061 caacaaggca cctggtggca ggtgtttgaa gtcgtagttt gtaaaggcga taaacaatgt
    63121 aacgacaact gggaagatga tagcaaaggt catcgcaata tatgatggga taatcaagag
    63181 atatgggaaa ccattctcat agataccttt taccatttct tttaatgtgg tagctactgg
    63241 catccctgaa ttccatcgtt tcgcggtatc acgtgcatct tttaggttga gtgcatagaa
    63301 agcgagatag acaaccgtga taatcaaatg gaaagaaccg cgaatcagca tgaatagtga
    63361 attatcttgt ccacgaacac taccgagggt aatcaagttg cctaattcac cagctgcaat
    63421 tgcaataaaa taaacaagga aggcaagggt aacacccaaa aagatgtatc ctttggcttt
    63481 ttgtttattg tagatttgtc cgagaccagg gatcagggac aaaaggagtg ccttacctgg
    63541 attttgtttc atagtcatag tctccttata tagtttctga atagatggtc gattttatct
    63601 attcagttta tcgttaagta ataaagtaga ctgggaggaa ctcccagtcc aactttaaac
    63661 ttgactagtt gctgtgtttt tgagcaattt cgtctgcaat agctttcaca gcgtctgttg
    63721 cagcagtttt agcgtctttt gcaccacttg cagcttcgaa gagcatgtta ccagctggtg
    63781 tccaaactga acccatttct gagatgtttg gcattggttg agctgaagcg aactggttga
    63841 taactgcagt tgtcaattcg tcgtttttgc ttacagcata ttcacgagcg tcagtgttag
    63901 ctggaacttc gtttgtagcg tcgtaaagtg ctttttgttg gtctgtagca gtcaagaagt
    63961 caacaaattt ttgagccatt tcttggtttt tagcgcctgt aggaacaacc cacgctttac
    64021 caccaccgaa tgctgagtag tttttaccgt ttacaagagt tgggattgtt gctacaccat
    64081 agtttacgcc agcttcttta tatgaagctg ctttccaagg tccttcgata atagcagctg
    64141 ctttaccatc tgtaaattga gtgttaatca agttgtttgc agcagtaccg tcttgaagac
    64201 cttgaggcca tttttcatac caagttttag cgtattcaat cgctttgatg gcaccttcgt
    64261 tagcaagtcc gatgtctttt ggatcagtac cgttttcgcc aaatacgtag ccaccgtaac
    64321 cagctagaag tccgtaagtg tagtagaagt ttgtccagtc agcaaggaag gcagttgttt
    64381 taccagcttc tccttcgaag gcatatttgc tatctttagc aagtgtttca agttctgcaa
    64441 atgtcttagg agcttcagtc aacaagtctt tgttgtagta aagaacaagt gtttcgataa
    64501 ctgctggtga gccgtaaact ttaccaccgt ttgttacaag agcagttgtt gtgtcatctg
    64561 ctttgctatc atctgcaagt gtcaattcag ataattggcc ttcagaacca aggctaccta
    64621 cacggtcgta tggtgccatc ataacgtctg gagctgaacc agattggttg tccaatgaca
    64681 agttatccaa accagtcaaa gcatcaccag ttttaactgt aacagtcaca ccattttctt
    64741 tttcgaagtc agctttgacg tcgttgatat aagattcata accttggtca acgtagacag
    64801 tcaattcttt gctaccttca gcagacttag atgcctctgt tgatgaacct gagtttgagc
    64861 aagcagctaa aacagcagtt gatgcagcaa gaagagcaac gctcttaagg agattgtgtt
    64921 tcattttctt ccctccgaag ataaatagtt ttgtgtgacg tctgcatagc gcaaacgttt
    64981 tcctaagttg acttcattat acaccagatt gaatccgttt gcaagcgttt ttataaaaaa
    65041 atttaaaatt ttttttgagt tttaaaaaac ataagaattt ttttgtatat ataatgaaga
    65101 gaaatatgaa atggtatagg aacgaacaga attaaaggaa aaccccttga tttgttaccg
    65161 ttttcagtat ataatgaaaa agagaaaacg tttgcgtcgt gtaagcggat tagataggag
    65221 agcttatgaa agtaagacag agtggtgtgc tgatgcacat ttcatcatta ccaggcaaat
    65281 atggaattgg ttccatggga caatcggcct atgaatttgt tgattttttg gtaagaacta
    65341 agcagcgcta ctggcagatt ttgcctttgg gaacaaccag ttatggagat tctccttacc
    65401 agtcattttc agcttttgca gggaataccc attttattga tttcgatata ttgattgata
    65461 aaggctggct ggcagcagag gatttacacg gtgttgactt tgggcagaat cctacagagg
    65521 tagattacgc agccattttt tatgctcgcc gtccattact ggagaaggca gttgccaaca
    65581 tgaaggcaca aggcttgccg gaagattact ggatgttctt aggggagaat gacttttgga
    65641 ttcatacctt tgcggagtat atggctataa aagagcattt tgatctcaaa ccttggacag
    65701 agtgggaaga tcaaggggcg cgcttacgtt accacgatac cttggaatat tatcgtcact
    65761 tgttggcaga tcgaattgat tatcaccgca ttacacaata tttattcttt tcacaatgga
    65821 aggctttaaa ggcttacgcc aatgccaaag gtgttgagtt tgttggggat atgccgattt
    65881 atatcgcggc tgattctgcc gatatgtggg ctaatccaca tttctttaaa acggatgaag
    65941 aaggcaaacc gagtgtggtt gcaggatgtc caccagatgc cttttcggaa attggtcagc
    66001 tttggggcaa tccgatttat gattgggaag cgatgaagca tgatggattt acttggtggg
    66061 ttgctcgttt acgtgaatca tttaagatat acgatatggt acgtatcgac cattttatcg
    66121 gctttgcctc cttctgggaa attccagcgg gtgaagaaac agcggtcaat ggctatcgtg
    66181 tcgaagcacc tggttttgaa ctctttgaaa ccatcaagta ccacttgggc gatttgaata
    66241 ttatcgcgga agatttggga acagtgacag ataaggtcat tcaattgcgt gaaaggactg
    66301 gtttcccagg catgaaagtc ttgcagtttg cttttgatcc agaaggagac agcattgaaa
    66361 tgccgcataa ccatcctaat aatgtggtgg catatacggg aacccatgat aataatacca
    66421 ttctgggttg gtatgaaaat gaaacaacga aagaatcgcg tgcattctta gataagtaca
    66481 gcaatcgtcg tgagggcgaa acggtcagtc atgctctttt ccgcctgctc tttggttcac
    66541 ctgcctttat ggcggtggct accatgcaag acttgctcgg cttggatggg tcagctcgta
    66601 tgaacttgcc aaacaccctt ggtggcaact ggacttggag aatgacggca gatcaattga
    66661 caccagagat tgaagcggaa ttgctagacc ttacagaaac ttatcgtcgg gttaatgtgc
    66721 atttggttga taaaaagtca gaataaaatg aactcctcta agtataactt agaggagcct
    66781 ttgttatctc tgtttacgga catagagcca gtaggaaatc cagtagtaga ttgtgtaggc
    66841 tagcatggcg actaaagacc aggagccgat agtaattatg atagccgcta aactaggaaa
    66901 taagagcttt gctagtaaat agaagaggag atacaggaaa cagtattgcc agtagtattt
    66961 tttgaaatgt ttcatcactt ttcctccttg ctacttttct ttattatagc attttaatat
    67021 acatttatca acttgttcac aaaatcacat tgacaaagca tggtttttgg agtagaataa
    67081 gactaaaatt aggaggtgct tatatgaaaa gaccgattca tttgtatatt tttgttgtac
    67141 tgtcatctat tgcgagcgta ttgcgtggct ttaatatatt ttttgcgaag tacgatgagg
    67201 cagttgtgcg tcaattgttg cagaatttta atgttgaggg gattgatgag gcatatttta
    67261 cctacatgag agaatctatc aatttccaga cgaatcttgt caataaggca tttgcagttg
    67321 tgttattact tgctgtgatt gcgacgattg tgttgctttt cctcaagaaa aatgagcagg
    67381 cttcttatac ctacctgggt tatctttttg taactctcct attttcgacc tacgctttta
    67441 ttggtgagaa agggttgggt caaatttata cggattcagt tatgcgtcag tcagtagagg
    67501 cgcaggcaat gatgaattat attattcgag ttgtcctatt tgccatctat tttggggtaa
    67561 ctattttctt ccatctgcgt aaaccgaaag aaaaaccgag cacagctatc aattctactg
    67621 atatttaatc atctaaaaaa ctgcatggtg tatagtgaac ctgcagtttc ttttgtttta
    67681 tgggatggcg atgtagcgac gggctcctga atagctgata tagctgatcc actggcgtcc
    67741 ttcggatgtg acaactcggt catagcggac agaagaacca gcaccgtagt aggtgatttc
    67801 actggcggac tgactagggc tattgcggac aatggctttg ctagagaagg tgtaggtacc
    67861 tgaggatgga aggtttttat ttgtttgttg aggtgtagga cttgtttgta cctgtttgat
    67921 aggaatgtag cgtctttgac cactatagct gacatagcta atccactggt agccgtcagc
    67981 tgttagaacc cgatcgtagc gtacgctctc accagcataa tagtaatcca aggttgtgct
    68041 agattgtttg gcttcatttt taattggtgc ttgctgggta aaggtatagg taccactgtt
    68101 tgctaagcca gatgtgtgcg tctgagtagg tgtaggactg gtctgactga caggagagcc
    68161 agctaggtcc ttgaagtgaa tatagccact gacagagttc ttatggatca gacggcgatt
    68221 gtaggtgtat cgagtaccgt agttgtattc ttcgatttcg accatgtctc cttggatgct
    68281 agatacccag gcaacgtgca taggggaggt ccaccaagct actgatccca cggcagggct
    68341 catatccacg cgataccctt cacgctgcgc tcggtatccc cagacatccg cattaccgta
    68401 agctggtggg atttcaaaac cgttgacttt actgagtcga aaggctacaa aggaggtgca
    68461 ctggcgtgtg tagagtctcc atggatcgac tgcatcaact actgtgtagg gatagtcatc
    68521 ccccaaggca ctggtggagc tggaacgtgt gctggcagta cgagtttggg tagtcagtcg
    68581 agctctggtg gtgttggttt gtgtttgggt gtttgttttt tgggaaatag cagagctact
    68641 tgtctgaggg tggctgctac ttgttggagc agtctgtgtc tggttgtccc tagttgtagg
    68701 tgttgtttgt ggggaaattg ctatcctatc ttgactggtc tggggaatag tcacctgtgt
    68761 ttgttgaccg tatgaagtgc ttgctcctgt ttcaatcttt tcatgagaag tttggtcggt
    68821 ttgcccagag ttgcttggac tagtgatggt gtttgcggtt gtctgctcag atccaatttg
    68881 tgggctagtt ggttgagtga ctggtgtagt tatttcctgt cctacagaac tacttgtcga
    68941 ggtctggacg gtccttaaat ttgtactagt attggtgttt gtacctatgt tggcatgggc
    69001 tactggtcca gctgctagac aggcataggc tagtagaaca gaagtagcac cgagagaata
    69061 agtgcggata gaaaagcgtg gttggtttgc tgtaagtgat gtttttgtca ttcagactcc
    69121 tttgatgatt ttttgtaggg gtcttagaac ctgtattcac aagtaaagtg cttttagata
    69181 agagatagtt tttcgctaat caaggcagtt ttttgaggga atactgactg tattttgaaa
    69241 aaaacgaacg atgagtaact ggaaaactag ccttaggtga acgtgctgaa ctgtgaatac
    69301 aggttcttac tccccctcgc taaatctatt cgcaagaagt tggataattt tttggcattt
    69361 tatatttgtt ttctgaaatt gataaattat cgcaaacgaa aaatcctcaa ccagtaggat
    69421 tgaggatagt ttagtattac attttttctg gtgcttttac gccgagaaga cgtagagctt
    69481 ctttgaggac aagtcctgtt gcgtaggcaa gtgctagacg gctgtcacgc tctgggcttt
    69541 catctaagat acgagtgtgt gcgtagtact tgttgaaggc ttgcgccagg ttgatagcat
    69601 atttagcaat gagggatggg tcaaatttgt caccagcacg ttcaacaaca tttgagaagt
    69661 tttggatgtg cttgatgatg tcccagcttt ctgcatcagc tagtttgtag tcattttctg
    69721 cgcttggtac aaagtttgcc ttgcgtaaga tagactggat gcgggcgtat gcgtattgta
    69781 cataaggccc tgtttcgcct tcgaaggaaa ccatagcttc taggtcgaag tcgtagccgt
    69841 tgtcacggtc ggttttgagg tcgtagaact taacagcgcc gacaccgact gcgtgtgcca
    69901 cttcttcctt gttttcaagg tcagggtttt tagcttcgat ttgagtaagg gcgcgtgaaa
    69961 tagcttcatc tagagttggc tcaagtagga tgatatttcc tttacgagtg gatagctttt
    70021 tcttgtcctt ggtaaccaga ccgaaggtaa catgggtcat atcgtcgctc cagtcgaaat
    70081 ccatttcttt caagacagcc ttgagttgtt tgaagtggtt gatttgctcc tgaccaacga
    70141 catagatgct tttcacaaag tcgtaagtgc gtttgcggta catagctgtt gccatgtcac
    70201 gtgtgatgta aagtgttgca ccgtctgttt tcatgatgag ggctggtggc agattgtagc
    70261 tctcaaggtc aacgattctc gcgcctttag attcttgaag aagtcctttt tcttctaaga
    70321 tttggatacc ttcgtccatc ttatcgttgt agaaggcttc gccattatag ctgtcgaatg
    70381 ttacgccgag tttgtcgtag atgcggttga attcgaccaa gctttcatca cggaaccatt
    70441 gccatagctc gtgtgcttct gaatcgccat cttccaattt tttgaaccat tggcgtgctt
    70501 cttcgtccaa ctcaggtttt tcttccgctt cggcattgat acggacgtag agcttgagca
    70561 attctgaaat aggatctgct tcgaccgcag ccttgtcacc ccaaagtttg taggcaacaa
    70621 tcaacatacc aaattgttta ccccagtcac ccaagtggtt gatgcggatc ggcttgtagc
    70681 ctagtttttc gtggatgtta gcaagggcat caccgataac ggttgagcgc aaatgtccaa
    70741 ctgagaatgg tttagcaatg tttgggctag acatgtcgat ggttacattg tgtccttgac
    70801 caatgttgag tttaccgtat tggtcttttt cagtaataac atctgtcaag acttggtggg
    70861 aaatcgcagc cttgtccaag aagaagttga cataaggacc cgttgcaaca actttttcaa
    70921 agccagttgg atccaatttt tcaacgatat ccgctgcgat agcctgtgga gccttgcgtt
    70981 ccactttagc aagtgagaag gctgggaagg caatatcgcc catttctgat gattttggtt
    71041 tttctagcag attgtagata gcttccactt ccaaactcgg aaggatggca gccaatcttt
    71101 ctgcaatcac ttgtttttga ttcatatagg atttcctcca aagttattga ttctatttta
    71161 acacatttct aggctaatag cggggaaaag tgttataata tttctataaa tatacatttt
    71221 gaggtaaaat gatgaataaa gcagggcgac atgatttaat aaaggccatg attcgtcaag
    71281 aaaaaatagg gcgacaaacg gatattcagc aaggtttaga ggctcgaggg gtagtggtaa
    71341 cccagacaac cttgtctcgt gatttacgtg agttgggagt gataaaaatt catgagaatg
    71401 ggcgttcatt ttattcctta gctatcgaag aagagcgcgt gaattttatc caattattgg
    71461 cacaatatgc gtataaagta gatagggcta gttttattct ggtccttcat tcagaactgg
    71521 gagaagcggc cttgatggcc aatatcattg atgcagaaaa gccgacctct atcctgggaa
    71581 ccttggctgg tgcagatact ttgttggtta tctgtcgaga tgaggaggcg gcccagcagg
    71641 ttgaagcgga aattaattat tatataaatt agaatagaga gaaaaaatgt caacagaaaa
    71701 aatttctcca ggcatgcagc agtatctgga tataaaagca cagtatccag atgctttttt
    71761 gcttttccgt atgggagact tttatgagtt attttatgaa gatgcggtag aagcggcaca
    71821 gattttggaa ttgtccttga ccagtcgtaa taagaatgcg gaaaatccga ttcctatggc
    71881 gggggtaccg tatcacgcgg cacaacagta tatcgacaca cttgttgaat tggggcataa
    71941 ggtcgctata gctgagcaga tggaagatcc caaacaggca gtcggcgtgg tcaagcggga
    72001 agtagtgcag gtcattactc ctggtacggt aacagactcg tccaaaatgg gagcagacag
    72061 taactatttg gttgcgattg accgtcaggg agtgcagttc gcactttctt atatggatgt
    72121 gtcaacaggt cagttttttg tgactagttt ggatgatttt actattcttt gtggtgaaat
    72181 tcgtaattta cgggcgcgtg aattggtcat cggctatgct ctgtcggagg aagaagagca
    72241 ggtcttttcg aaccagatga acctcctgct ctcttttgaa gatgaggtga cagaggatgt
    72301 ccaattgatt gataactcct tgacagactt ggaaaaggct gcggcaggta aactcctcag
    72361 ctacctacat cggactcaga tgcgagatct gagccacttg caaaaggtgg tccactatga
    72421 aatcaagaac tatctgcaaa tggactatgc aaccaagtcc agtctggacc tgcttgaaaa
    72481 cggtcggaca ggcaagaagc atggtagttt gtactggttg ttagacgaaa ccaagacagc
    72541 catgggtatg cgactattgc ggacatggat tgatcgtccc ttgattgacc ttaagcggat
    72601 tgagaatcgt caggctgtag ttcaggtttt tctggattac ttctttgaac ggagtgactt
    72661 ggtcgaggct ttaaaaggtg tctatgacat cgaacgtttg gccagccgag tgtcttttgg
    72721 aaaaaccatg cccaaggatc tcttgcagct ctctcagact ctgggaaata tcccagcaat
    72781 caagaatatc ttgcaacaaa tcaatgagcc tgctctaggc aatctggtag ctggattgga
    72841 cccaatccca gaactgcatg ctctgatcag ctctgctatt gacccagaag cccaaggggc
    72901 tatcacagat ggaaacatca tccgtacagg ctttgacgaa acgctggatc agtatcgtct
    72961 ggtcatgcgt gagggtgcgg gctggattgc ggagattgag gctaaggagc gtgaagcgtc
    73021 tggtatcaac aatcttaaga ttgactacaa taaaaaagac ggttactatt tccatgtgac
    73081 caattccaat ctgggcaatg tgccggacca ttttttccgt aaggcgacct tgaaaaactc
    73141 ggagcgctat ggaacggaag agttggctaa gatcgaaggg cagatgttag aggcccgcga
    73201 caagtcgtct aacttggagt atgagatttt catgcggatt cgccaagagg ttgaaaaata
    73261 catcagccgc ttgcagaagc tggctcggac tattgcaacc atcgatgtct tgcaggcctt
    73321 tgcggttgtg gcggagcagc aacatttggt ttgtccacgc tttacagatc aaagagaact
    73381 gaccattgat cgtggtcgtc atgcggtggt ggagaaggtc atgggcaagc agacctacat
    73441 tcccaactct attcacttga ataccgatac gcatatgcaa ctgattacag gtccaaacat
    73501 gagtggtaag tctacctata tgcggcagtt ggcggttatc gtcatcatgg cgcagatggg
    73561 ttcctatgtg cctgcggatc aggctgaatt accgattttt gatgctattt tcacccgaat
    73621 tggggcggca gacgacttgg ttagtggtca atcgaccttc atggtcgaga tgatggaggc
    73681 caataaggca gtccgtctgg cgacagatcg gtcgctcatc ctctttgatg agttgggacg
    73741 gggaacggcc acctatgacg gtatggccct ggctcagtct atcatcgagt acatccacga
    73801 caagattggt gccaagaccc tctttgccac ccactaccat gagttgacag accttagcca
    73861 gaccttggaa cacttagaga atgtccatgt atcgaccttg gagaaggacg gccaagtcac
    73921 cttcctccac aagattgccc aaggtccagc tgacaagtcc tacgggattc atgtggctaa
    73981 gattgcagga atgccagagg agttattgga gcgagcggat aggattttgc agacgcttga
    74041 aaaccaagcc cctactgcac cagctaaccc agctccgtca gtagtggaag agccgtctgg
    74101 tcaaatcgac ctcttcgcag acacgccttc tcacccagtc cttgatgaac tggaaaaact
    74161 agacatctac aatatgacac ctatggaagt catgatggcg gtggcggagt tgaagaagaa
    74221 attataatat agtcatttag tttgctttat tacttcgtta actcactttg ccgtactcca
    74281 gtactgtctg cagctcgttg cctagtacta aaagcaaact aaatgactat acaatgaagg
    74341 tcaggactct tgttctggct tttttgagca aataacgaac gtttgaatcc atttttgcaa
    74401 aaatcttgtt gtttttgatg tgcataggct atactgatga aagataaaag taaagaatgg
    74461 gagatgattg gctatgcaac ataatcagga tctgcgtgcg aaactgtttc aattggaaca
    74521 attggttttg gatatctatg ctgaactaga aagacaaaat ccgcaatttg ccccgattag
    74581 ctggtatgtg tatcatctgg gtttggatga tgaacaggct agcgaactca tgcagtattt
    74641 tctctttcaa caggataagt ctcttgagga actaacggct tggttggaag agtgggttgc
    74701 gaccaatcgt tacccttatc ctcgtgattt tattgagaag atggctcgtc gctaccatga
    74761 agaagttaca cgggcagtgg atagggcgga tgccagtctg tccttagaag atttggagca
    74821 gttgaaggca agcggagctt tcgatgggct agatgagttt gaagagtaaa gccccagagg
    74881 ttttcggttc ctcacataaa aaagttgata taaaagacta agtcaggaca aacgttctgg
    74941 cttttttgcc gtttagtgat gaaaaacgac cacatagcca taagcccttg aaaccactcg
    75001 aaaaatggtg tttaataggg gcggaaagag aaaggagaga atatgaaagt atagtcattt
    75061 gaatta
//
LOCUS       DASFQS010000002        70976 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.002, whole genome shotgun sequence.
ACCESSION   DASFQS010000002 DASFQS010000000
VERSION     DASFQS010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 70976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 70976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..70976
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.002"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            100..393
                     /locus_tag="U1041_000073"
     CDS             100..393
                     /locus_tag="U1041_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000024184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HEM4767222.1"
                     /translation="MGATQQVNFRADSFYYQQTKELLAGESMTVSDVLNATLRKIATG
                     TIDAQEFVTKDSREDSNKIAFEELKKEILLGHQDILAGKTSSLVAVRKEFGLD"
     gene            386..721
                     /locus_tag="U1041_000074"
     CDS             386..721
                     /locus_tag="U1041_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003017270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEM4767223.1"
                     /translation="MTDKKKYELVISDRAKQDLQAIYDYILINFYSQQAAASKIDLIL
                     KALEILELFPEVCPLVSSRGFGNLTADGKPYRYMPIEHYLVFYFIEGYQVFVARILHS
                     KQNWITLLK"
     gene            complement(794..875)
                     /locus_tag="U1041_000075"
     tRNA            complement(794..875)
                     /locus_tag="U1041_000075"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(840..842),aa:Leu,seq:cag)
     gene            1013..1690
                     /locus_tag="U1041_000076"
     CDS             1013..1690
                     /locus_tag="U1041_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4767224.1"
                     /translation="MKKIIKQYQEKGSVVIGYARVSSRDNRQELGLEVQKGALHFCDR
                     LYMEKESGGHQDRPQLQKAIKLAKACAESGIETRFVVYKLDRLTRKMLHLSAIISDLT
                     SHQIRLQSVHEQIETDSLTGRFFCLMLGYVAEWELQAISDRTKDGLRKARERGVKLGN
                     KGISKSKEKQVIQSYVVEETTIRDMVKQLNISTATIYQVLKRNNIPFRRQKAHNSLTE
                     TGQNDKL"
     gene            1909..3111
                     /locus_tag="U1041_000077"
     CDS             1909..3111
                     /locus_tag="U1041_000077"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:NF016757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PT domain-containing protein"
                     /protein_id="HEM4767225.1"
                     /translation="MKKIVTKKIGIALACTTLLGGVIAPVAIPAFQNIVHAEETNQQP
                     ISVLVAAVSVEDDTQLPFYNVTINPGETKTISAPKVEGWKLDQYTDPTYELTYDQALK
                     TLNSVGLVWVQFLMIKDAAPTTKDPVIFTVAHRVAGGDDLLLDNAVVNPGESITLTPI
                     AVDGYIARADNKYTYTYDEVATGSSSLFVAEILYDKVAVEQPAEQPVEQPAEQPAEQP
                     AEQPAETKPAEQPTEQPAEQPAELPTDQPAEQPVEQPADQPVEQPVEKPAEVPVEQPV
                     EQPVEQPVEQLVEQPVEQPTEQPAEVPTEQPVDTPTDQPVEQLTDASSLTDQTAGKVQ
                     VVAATDKKMVDKSAPSTPAVKPEEGSQTTAKTLPKTGDSSSMLLVLGGVLSSLSGLGL
                     AATSRKRD"
     gene            3269..4144
                     /gene="rsgA"
                     /locus_tag="U1041_000078"
     CDS             3269..4144
                     /gene="rsgA"
                     /locus_tag="U1041_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEM4767226.1"
                     /translation="MQGRIIKALAGFYYVEADGQIYQTRARGNFRKKGQTPYVGDFVD
                     FSAEENSEGYILKIHERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEQK
                     DMDPIIYISKMDLVEDRTEMDAFKAIYEKIGYPFVYSLEELTPLLQDKVTVFMGQTGV
                     GKSTLLNRIAPELALETGAISDSLGRGRHTTRAVSFYNVFGGKIADTPGFSSLDYEVK
                     EAEALTDCFPEIAEASQDCKFRTCTHTHEPDCAVKEAVASSAISQSRFDNYLQFLSEI
                     QNQRETYTKVSKKFK"
     gene            4159..4818
                     /locus_tag="U1041_000079"
     CDS             4159..4818
                     /locus_tag="U1041_000079"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM4767227.1"
                     /translation="MSHYKIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVP
                     NISFGADVVAAMRPHSKLVFDCHLMVSNPENHIETFARAGADILTIHAEATVHLHGTL
                     QKIRAAGMKVGVVINPGTPLVTIEPVLNLVDQVLLMTVNPGFGGQAYIPEVAEKIEAL
                     VKLREAKGLNFDIEVDGGIDDKTIHSAKNAGANVFVAGSYLFKGDLDANVAKLRAALN
                     D"
     gene            4811..5443
                     /locus_tag="U1041_000080"
     CDS             4811..5443
                     /locus_tag="U1041_000080"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HEM4767228.1"
                     /translation="MIKIAVIAGGSFDCLPEPADLYVGVDAGSLRLLDHSLPLDWAIG
                     DFDSVTPEELGRIKDLAERFLQAPAEKDDTDLELALKEIFKAYPQAQVRIYGALGGRM
                     DHMMANLFLPAEPDLAAYMEQIELVDSQNVVRFRPAGRHRLSPIAGMKYISFMPSDQS
                     HLTIRHAKYPLDASNYFFKKCYSSNEFIDRDIDIQLDQGYVVLIYSKDKD"
     gene            5444..6682
                     /gene="rmuC"
                     /locus_tag="U1041_000081"
     CDS             5444..6682
                     /gene="rmuC"
                     /locus_tag="U1041_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEM4767229.1"
                     /translation="MDIVLLILLILVLLALVFLYGKWQSLALLLQEQAEDTADNLSDQ
                     LSYQLENATLKQQQVIHQEVERLRTELYQQLTDIRQELNKSHLETRDATDRRLQAIQE
                     SNEKRLEEMRQTVEEKLEKTLQTRLQASFETVSKQLESVNRGLGEMQTVARDVGSLNK
                     VLSGTKTRGIMGELQLGQIIEDILTPSQYEREFATVSGSSERVEYAVKLPGRTEGDYI
                     YLPIDSKFPLADYYRLEDAYESGDKDQIDLHRKNLLAAIKRFAKDIQSKYLNPPETTN
                     FGVLFLPTEGLYSEVVRNPIFFDELRRQENIVVAGPTTLSALLNSLSVGFKTLNIQRS
                     ADDISKVLGNVKLEFGKFSDLLVKAQKQLNQASSNIDKLLTTRTNAIERSLRTIDLYE
                     DDQTKGLLGLSPLDEEDNEN"
     gene            6672..7613
                     /locus_tag="U1041_000082"
     CDS             6672..7613
                     /locus_tag="U1041_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM family protein"
                     /protein_id="HEM4767230.1"
                     /translation="MKINQMKKDEFFEGFYLIKTAEVRQTRAGKDYLALTFQDDTGEI
                     EGKVWDAQPGKIKDFTAGTVVHMQGRREVYNNTPQVNQLVLRLPKAGEPNDPADFKEK
                     PPVDVKDTKDYLSQMIFRIENATWQRIVRALYSKYDKEFYSYPAAKTNHHAFYSGLSF
                     HTATMVRLADAIGDIYPQLNKSLLFAGIMLHDLAKVIELTGPDNTGYTVRGNLIGHIS
                     LIDEEITKVLMELGIDDSKEEVTILRHVILSHHGLLEYGSPVRPQVMEAEMIHMIDNI
                     DAEMMMMLTALDKVGPGEMTSRIFAMDNRAFYKPNLD"
     gene            7613..8490
                     /locus_tag="U1041_000083"
                     /pseudo
     CDS             7613..8490
                     /locus_tag="U1041_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938439.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
     gene            8580..9392
                     /gene="purR"
                     /locus_tag="U1041_000084"
     CDS             8580..9392
                     /gene="purR"
                     /locus_tag="U1041_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HEM4767231.1"
                     /translation="MKLRRSERMVVISNYLINHPYELTSLNTFAEKYESAKSSISEDI
                     AIIKKAFEESSIGHIETITGASGGVVFTPSISKAESVEIAQALRDQMAESNRILPGGY
                     IYSSDLLSTPHILKNVGRIIANAFKEEKIDAVMTVATKGVPLANAVANVLNVPFVIVR
                     RDLKITEGSTVSVNYVSGSSDRIEKMFLSKRSLKAGSRVLIVDDFLKNGGTINGMISL
                     LSEFDSTLVGVAVFAENQKGDRSVANYKSLLAVTDINVKENRVDVELGNIFE"
     gene            complement(9419..10285)
                     /locus_tag="U1041_000085"
     CDS             complement(9419..10285)
                     /locus_tag="U1041_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM4767232.1"
                     /translation="MKIDIRIPQAFPQLTVKEVLEDYFLIPRKIRHFLRTKKHVRVNG
                     ELINWQSPIAAGDLLELTFDQEDYPEKSIPLGQADLVEELYQDEHLIIVNKPEGMKTH
                     GNEPTEIALLNHVSAYVGQTCYVVHRLDMETSGAILFAKNPFILPILNRLLEDKVIYR
                     DYLALCQGQLKKTDWIITDKIGRDRHDRRKRVVDNRKGQVALTQVRLLKTLGKNSLVS
                     CRLQTGRTHQIRVHLAHHGHALIGDPLYSRVVAPRLMLHAQKLSLTHPLTLEEISVEA
                     RSESFERIVKKS"
     gene            complement(10287..11255)
                     /locus_tag="U1041_000086"
     CDS             complement(10287..11255)
                     /locus_tag="U1041_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000081018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM4767233.1"
                     /translation="MTQVYDITIIGGGPVGLFAAFYAHLRQAKVKIIDSLPQLGGQPA
                     ILYPEKTILDIPAFPSLTGQELTDNLLAQLAPFDTTICLNETLTAIEPGETISLTTNK
                     GSHQTKTLIIAMGGGAFKPRPLEIDGADSFDNVHYHVSNIQQYADKDIVVLGGGDSAV
                     DWSLAFEKIAKTTQIVHRRDNFRALEHSVEELKQSSVTIHTPFIPKGLSGENGRASAI
                     DFDKVKSEDKLTLSFDHLFVNYGFKSSIGTLKEWGLELNRHRITVNSKQETSVPGIYA
                     IGDCCFYEGKIDLIATGLGEAPTAVNNAMNYLNPNEKVQPKHSTSL"
     gene            11408..13621
                     /locus_tag="U1041_000087"
     CDS             11408..13621
                     /locus_tag="U1041_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM4767234.1"
                     /translation="MDDLQHQPIEVPEDFQIDHEDRPSRRRRGNRGSVDKPKKKSRIP
                     EPIRKFWRRYQLTKILIILMVLTVLTVGGYLFFLAKTANVGDLQQALKATTIIYDKDG
                     AEAGTLSGQKGTYVELDAVSDNLENAVIATEDRSFYKNSGINYQRTILAALTLGRSGG
                     GSTITQQLAKNAFLTQDQTISRKAREFFLALEINKKYSKQEILTMYLNNAYFGNGVWG
                     VEDASQKYFGIPASDLTLEQAAVIAGMLKGPEIYNPYYSLENAVNRRDTVLQNMVNAG
                     YIDQATADAGFQVDLASQLSDTYTGKQSNYSYPSYFDAVIAEAIERYGLKESDIINNG
                     YRIYTEMDQNSQASMQVIFNDETMFPTSSFDGTHAQAASVALDPRTGGVRALVGRVNS
                     SEDAVFRTFNFATQAKRSPGSTIKPLVAYAPAVAAGWAIDTPLDNHTETYGDYTLHNY
                     DYSTSDTIPMYQALALSYNLPVAYIVNTFGIDKAFEFGQKFGLDMENVEKVLGASIGS
                     GVETNPLQMAQAYSAFANDGVMKDAHLITRIETASGKVLAQHRETSTKVIDRSVADKM
                     TSMMLGTYTNGLGVSADATNYYLAGKTGTTETSFDVNLVNDQWYIAYTPDLVISQWVG
                     FEQTDENHYIDSSSYWMAPSVFQTVANSILPYTAGTQFEVENAYAQNGIVEVAPDEAA
                     QTESSLGQEQVQEISDQAKNLIEQTKQNLIDAQLPERAKTLWDNITSWFGELSNP"
     gene            13655..13807
                     /gene="rpmG"
                     /locus_tag="U1041_000088"
     CDS             13655..13807
                     /gene="rpmG"
                     /locus_tag="U1041_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015912025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM4767235.1"
                     /translation="MALKKASLACTVCGSRNYSISLSSNPKPTRLEVNKFCKHCGQYT
                     VHKETR"
     gene            13817..13993
                     /gene="secE"
                     /locus_tag="U1041_000089"
     CDS             13817..13993
                     /gene="secE"
                     /locus_tag="U1041_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEM4767236.1"
                     /translation="MKFIKDIIRILKDTSWPTRKQSWTDFVSVVEYTAFFVAVVYLFD
                     LILSRGIMSLINLF"
     gene            14103..14642
                     /gene="nusG"
                     /locus_tag="U1041_000090"
     CDS             14103..14642
                     /gene="nusG"
                     /locus_tag="U1041_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEM4767237.1"
                     /translation="MYDSFDKGWFVLQTYSGYENKVKENLLQRAHTYNMLENILRVEI
                     PTQTVQVEKNGEVKEVEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKP
                     TPLLEEEIRQILVSMGQTVQEFDIDVKVGDTVRIIDGAFTDYTGKITEIDNNKVKMVI
                     SMFGNDTIAEVNLSQIAEL"
     gene            14788..19857
                     /locus_tag="U1041_000091"
     CDS             14788..19857
                     /locus_tag="U1041_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEM4767238.1"
                     /translation="MKQKWSQIENKQRFSIKKLSVGVASVSIGFFITGIPMVQADTSG
                     EGLESTVAVATDMDSRPDSVAEKKEDGPLSDEPVNTDQVDEPVAEEGVVEEVVDTEAD
                     EEPGLSVDRAATEIKTTAGKTTDESREKEDISGKEASAPQTSPQESQLEPEEVTRGRY
                     ILQFSDENRNLVLDKLKKIDGVKIVHEYKEVLTGASVEVGKESLSDVKAITELTSLEE
                     SRRIRPTLHTAKQLVGALKASSKYQTDGRGMVIAVIDSGLDIKHKDMRLDEGVVPKIK
                     EITPSTTGTYTLKVPHGYNYVSGNDNLYDDTHEPHGMHIAGTLAGNATDEEVASKQGI
                     DGIAPNAQLLVYKIFSNDPKNYKAETEDAAYAAIEDAIKHGADVISLSVGYYDSGLPG
                     NAYYTIAKRAAEKGIIITAAIGNAGASSSDTSFDLHTNNALGAVDTATTVGVAATPAV
                     IGVGSARNTHLVQREFMLNGQSFGYYPIGYTTLTEGKYEFVDAGNGRWEEVQGLDLAG
                     KVAIIKKDKFDLKDAVRNLKFKDVAGIIVINTDQGWNKDYYKTHQLLVDDKTLLSYSS
                     IWGISLSGEDGRRLLEVANQSQGNTGLVLKPTIGMKKLIEVPTVSGFSSWGPTVNLEL
                     KPEIVAPGEDVYATLNDNRYGSMSGTSMASPIVAGASALLLPRIRQMTPPEGMTRMDL
                     LRIILMNTATPLIDVLDSSGHALENSPRQQGAGLLQIDRAFETDVILHHRLKGGVELK
                     EIGRETEFEVTLENLGNQQRNFAISAGKVLTSQDVPVDRIGRSGKVVKEIHATEIKGS
                     SLHLSEQSIQLGPKEKKTIRLRLDAGEAKDQFAEGYIYFKSLTEGQSDISIPYFGFVG
                     DWSKERIVDAPAWETSSKLKLTSVLSSYKHNKSGRYIELGREKIQDNQSSLNPDNIAI
                     QNQHSDSQIGNAFVRFALLRDITNYDLDIVKEATEDAPVLRRIDTGTMLSRVRYVDYF
                     ESLSEYSKLRTPIELHRWDGKVYDASKDENVPVPEGQYFFRLRVKNKENGAYQYTYLP
                     VKIDNQKPEIVAIDTNRLTSHRELVVTAKDNNKVWEVRANLNGEDLLVEKVVDDAGQL
                     HYHLKEVELPLDAKNHLRVEAMDIAGNVIAVETDLVSPVIQFKNLEDLMATRSKKTVE
                     IKANVSAQVSDVQANLDAQAVNYSLENGQLSLQIPEQSDGRHSFELILKDKDGNLIYT
                     KTLNYLVDNEKPTIDLDIEEDEEVIQIGKNGRFTLKGKVSDNVSLPKNIKLYYSNLDI
                     GKGELKFIDVKEDGSFEQDFFKSDFPRAIILTAVDEKGNKLKDLRINTSPESLDDEEE
                     TEVPITVNNWLIDPIRFNKESLGRELDSELVDFKKQEDGTYLFTFEIEAETEQAYSVR
                     INGGEKRYFEDGKLTYPVTLIEEGNVVDISVYNEADELTYTKKYQMLVDTENPVLQLE
                     NEVLPLERQVVDSEEDEDEENQYAGVLLADADGHLTLTGSAKDNGIYWSLKINEDFVA
                     RGGFWRQYGNNEKAFRYELHSLKDGDTVKLDLSDSFGNALVKKYKVRLNDKEVSEQVP
                     ENGLHVEQSDKDQASSIPISKSEAHVPMPKEENSLASQTESTEIALLTGDTIEDGVEH
                     LVRLTKHEEALGISDERIEVSVPHRELFERSGRGETSALAADTSGKLPQTGDSLGSVF
                     ISALLGLFGGAMALGNLKRKE"
     gene            complement(19900..19970)
                     /locus_tag="U1041_000092"
     tRNA            complement(19900..19970)
                     /locus_tag="U1041_000092"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19936..19938),aa:Cys,seq:gca)
     gene            20322..21098
                     /gene="rpsB"
                     /locus_tag="U1041_000093"
     CDS             20322..21098
                     /gene="rpsB"
                     /locus_tag="U1041_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEM4767239.1"
                     /translation="MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQ
                     QTVKLADQAYEFIRDAAANDAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLT
                     NWGTIQKRIARLKEINRMEEDGTFDVLPKKEVALLNKQRARLEKFLGGIADMPRIPDV
                     MFVVDPHKEQIAVKEAKKLGIPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMA
                     DAIIEGNQGEDSVAAVEAELAAEPASTESIEELVEVVEGK"
     gene            21226..22266
                     /locus_tag="U1041_000094"
     CDS             21226..22266
                     /locus_tag="U1041_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEM4767240.1"
                     /translation="MAEITAALVKELREKSGAGVMDAKKALVETEGDIEKAIELLREK
                     GMAKAAKKADRVAAEGLTGVYVDGNVAAVVEVNAETDFVAKNAQFVELVNTTAKVIAE
                     GKPADNEAALKLAMPSGETLEEAYVNATATIGEKISFRRFALVEKTDAQAFGAYQHNG
                     GRIGVISVIDGGDETLAKQISMHIAAMKPTVLSYTELDEQFVKDELAQINHKIEQDNE
                     SRAMVDKPALPLLKYGSKAQLTDEVIAAAEEAIKAELAAEGKPEKIWDKIIPGKMDRF
                     MLDNTQVDQAYTLLAQVYIMDDSKTVEAYLNSVNASVVEFARFEVGEGIEKASNDFEA
                     EVAATMAAALGK"
     gene            complement(22632..23333)
                     /locus_tag="U1041_000095"
     CDS             complement(22632..23333)
                     /locus_tag="U1041_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="HEM4767241.1"
                     /translation="MLDISYQANTFHISYQGRPLGNIHTYSNPYHQTNIYLRLDLVDF
                     DWTIAEQLFQSLQASLGGKTLQVMLSSAEQERIHFLTAAGFVCKRKCYEFEVTKQDYL
                     GQADTTNLITARKGTAPYQIACQQIFDHYQTVHQDINPWTTSQEEFEKDLPDRVYTDS
                     ENCAFVENNEIAYVCGKDEQSFDSFIQAVICQLFEQYEQISFEADDCDPIAMCLADHF
                     RFPNKPSWDTYILKS"
     gene            complement(23327..23671)
                     /gene="traF"
                     /locus_tag="U1041_000096"
     CDS             complement(23327..23671)
                     /gene="traF"
                     /locus_tag="U1041_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HEM4767242.1"
                     /translation="MNFQDYIQDFTSVTVEQAQNLLAAKEGAVLFIGRATCPYCNRFA
                     PKLHKVAQDKQVTVHFLDSSQISPELQALRDHYQVPTVPGLLVAKPTGVQVHCDSSMT
                     EEDIAAFIENQC"
     gene            23941..24399
                     /locus_tag="U1041_000097"
     CDS             23941..24399
                     /locus_tag="U1041_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HEM4767243.1"
                     /translation="MAMKNTSDYIEEHIKAILDQVSVAELRRSELASRFEVVPSQINY
                     VIKTRFTASRGYIVESKRGGGGYIRIGRITFSDKHELVHDLLNNMGEQLSATVYADIL
                     QLLFDEGLMTEREGNLFLSTGSDEILGKDASTIRARMMRQILRRLDRKEE"
     gene            24403..26856
                     /locus_tag="U1041_000098"
     CDS             24403..26856
                     /locus_tag="U1041_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM4767244.1"
                     /translation="MKILTGLQRVFEDAQLVAQRYACDYLETWHVLLSFVINHDTVAG
                     AVLAEYPISISDYEHATFVVTDKVYREELDSFRILPSSKRLDETASFAKKIAEVVKAK
                     ELGTEHLFMAMLLDKRSTASQILDKVGFHFEDSDDKIRFLDLRKTLETRAGFTKEDLK
                     SIRSIMKGGKNKPTNAGQMMGMPPAPQSGGLEDYTRDLTALAREGKIEPVIGRDAEIA
                     RMIQILSRKTKNNPVLVGDAGVGKTALALGLAQRVAAGDVPASLAQMRVLELDLMNVI
                     AGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGIDSTLDAANILKPALA
                     RGTLRTVGATTQTEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILAGLKGTFEKYHR
                     VRIGQAAVETAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQAEETGLTSIDKA
                     LMDKKYKTVSKLLIKTKEDAEASQNYDLEVTEEDVLETLSRLSGIPVAKLSQSDTKKY
                     LNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKA
                     LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLL
                     FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF
                     GALDLSKDHKEVEKRIFEELKKAYRPEFINRIDEKVVFHSLTESHMQDVVKVMIKPLL
                     AVTAEKGITLKLQPSALKLLAKQGYDPEMGARPLRRLLQTKLEDPLAEMLLRGDLATG
                     STLKVGVKGEELKFDVVKG"
     gene            26975..27466
                     /locus_tag="U1041_000099"
     CDS             26975..27466
                     /locus_tag="U1041_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HEM4767245.1"
                     /translation="MNQTIAVVFGTFAPMHKGHLDLIERAKLACGQVCVVVSGYDRDR
                     GDRIGLDLTKRFQFAQEQFEGDDFVEVRALDETDLPPYPDGWDLWLERLLALLDLSEH
                     QVPVFYGSEEEYAQELHSRGYQAHFSPRKFGISATLIREQPQQYQDYIAPAFLAFFGK
                     ERL"
     gene            complement(27569..28573)
                     /gene="dusB"
                     /locus_tag="U1041_000100"
     CDS             complement(27569..28573)
                     /gene="dusB"
                     /locus_tag="U1041_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEM4767246.1"
                     /translation="MANLNTPFMIGDVEIPNRCVLAPMAGVTNSAFRTIAKEMGAGLV
                     VMEMISEKGLLYNNEKTLHMLHIDDNEYPMSIQLFGGDAEGLKRAADFIQTNTKANIV
                     DINMGCPVNKVVKNEAGAKWLKDPDKIYHIIKEVTSVLDIPLTVKMRTGWNNTDLAVE
                     NALAAESAGVSALAMHGRTREQMYTGTVDLETLTKVAGSLTKIPFIANGDIRTVEDAR
                     QRIEEVGADAVMVGRTAMGNPYIFNQINHYLETGEVLPDLSFDDKLNVAFDHLTRLTN
                     LKGESVAVREFRGLAPHYLRGSAGAAKIRGAVAKAETIEQVQELFDQARAAYQERIAK
                     "
     gene            complement(28566..29432)
                     /gene="hslO"
                     /locus_tag="U1041_000101"
     CDS             complement(28566..29432)
                     /gene="hslO"
                     /locus_tag="U1041_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEM4767247.1"
                     /translation="MDKIIKTLSKSGHFRAFVLDSTETVKTAQEKHDTMASSTVALGR
                     TLIANQILAANEKGDTKITLKILASGAVGAVISVANTKGQVKGYIQNPDLDYKRTATG
                     EVIVGPLVGNGQFLVITDYGTGHPYNSMTPLISGEIGEDFAYFLTDSQQTPSAVGLNV
                     LLDEEDKVKVAGGFLLQVLPGATEAEIARFEKRIQEMPAISSLLASENHIEALLSAIY
                     GDDDFKRLSEEEIGFVCDCSKDRFLDALASLPKTDLKEMKEEDKGVDITCQFCQTHYH
                     FDENDLEELING"
     gene            complement(29512..32631)
                     /locus_tag="U1041_000102"
     CDS             complement(29512..32631)
                     /locus_tag="U1041_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4767248.1"
                     /translation="MKIRNRSLFYTVGSVAVTAGLLLSLATSPIPSVHATEVAIENYP
                     SLAITKSEVTIQGYLIAPLNSSGTAFDATNKTNLALGASMDTAAADTIPIQLKEPLRS
                     QFNLVDHPELVGKLVRITGTSDTYMKRAGIKPATAIEIVDSSSTNVQPPTSENTTIES
                     NDLVSTPIATVRSGAQGTEYTVSGKIISLVNGWGGNGFYLQGSDGAGIYIYPGAALGY
                     QPGDTVQLTGTLGEYKGELQLTTVSNHKAISEHFNAPITETNIAQLATQAQATLVSLK
                     NLTVGDIQSDSYQNSTFTVTDSEGQTVDVRLDSRTGIKTADLLNHINKGDKINLTAIL
                     STYNGKIQLKPFDLSHFEVVEKATTETAPGKIETVTVGHIQGASHQSPLTNQSVILKN
                     VVVTYVTSANNFYVQDVTPDGDVKTSDGINIFTDKLKTNVKVGDLVTIAGRVEEYLGK
                     GYTERGETDLTITQIRATEVTVDGTAPVPSPIVLGLDRTIPADIIDNDGLAQFDPEQD
                     ALDFWESVEGMVVAVDDAKILGPLKNKEIYVTPATSQLPLNNVGGVNLRPEGNNTNII
                     PLLLKNGKQMVKSGDYFTGRITGPVTYSYTNYKVYVDDSTLPTLHEGTTKPETTTIIP
                     NDDKLTIASYNIENFSADSKSTSDAKVQRIAKSFVSDLHSPDIIGLIEVQDNNGATND
                     GTTDASKSAERLITAIQAAGGPIYTYVDIAPENNKDGGQEGGNIRVGFLYNSKRVSLS
                     DKPIGTATQAIAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFNGEKVVVLANHLN
                     SKRGDNGLYGKIQPVSFKSEEKRHILAQIIADFTKAGLAQNPNANIVMLGDFNDYEFT
                     KTIEILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMVHVNSA
                     FMEEHGRASDHDPLLVQLDVTKAQEPTQPEPSDKQTDDSGTVNNSDDNGTTNNNKPTN
                     LSTSNQTAINADDRSSATDKGQTTVTPTANNSQKKILPKTGEETSFVLITIGLVILSA
                     CLVKKQKES"
     gene            complement(33166..35397)
                     /gene="gshAB"
                     /locus_tag="U1041_000103"
     CDS             complement(33166..35397)
                     /gene="gshAB"
                     /locus_tag="U1041_000103"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HEM4767249.1"
                     /translation="MLQKLSPNSPILQATFGIERESLRINSNHRVAQTPHPHKLGSRS
                     FHPYIQTDYSEPQLELITPVAHSTKEARRFLGAITDVAVRSMEKTEYLWPLSMPPVIS
                     EEEIQIAQLDSDYEYQYRVGLGERYGKLVQSMSGIHYNFELGKDLTQQLFELSEETDF
                     IAFKNTLYLKLAQNFLNYRWLLTYLYGASSLAEKGFLTTEVGCVRSIRNSKYGYVNSD
                     DVHISFSSLQQYVADIEQAVQSGQLSAEKEFYSSVRLRGAKTSRDYLSKGISYLEFRS
                     FDLNPYDPLAISQETLDTVHLFILSLLWLDQLTDVDNTLAKADKLNNLIALSHPHTPL
                     PNDADATPILTAMKAIVLHFGLDDYYGQLIAHVEAALQDPRLTLSGKIAEQVEDGSLE
                     KFGQQQGQVFHDYAWTAPYALKGYENMELSTQMILFDAIQLGLNVEILDEEDQFLKLW
                     HGDHVEYIKNGNMTSKDNYVIPLAMANKVVTKKILDQAGFPVPAGAEFTNKTDALRYY
                     GQVASSAIVVKPKSTNFGLGISIFQEPASLADYEKALDIAFSEDSHVLVEEFVAGTEY
                     RFFILDGKCEAVLLRVAANVVGDGSSTIHELVEQKNQDPLRGRDHRSPLEIINLGDIE
                     LLMLEQQGYTPDTVLPEGVQAFLRGNSNISTGGDSIDMTDQMDESYKQLAAAMATAMG
                     AWVCGVDLIIPDRTKPASKEDPNCTCIELNFNPAMYLHTYTYAGPGQSITPKILKKLF
                     PEL"
     gene            35761..37053
                     /locus_tag="U1041_000104"
     CDS             35761..37053
                     /locus_tag="U1041_000104"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEM4767250.1"
                     /translation="MTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIV
                     IDGTKYKLHLIPSGIFFPEKISVIGNGVVVNPKSLVKEINYLHDSGVTTDNLRISDRA
                     HVILPYHIKLDQLQEESKGENKIGTTNKGIGPAYMDKAARVGIRIADLLDKEIFAERL
                     RTNLAEKNRLFEKMYESTPIEFDEIFEEYYAYGQEIKKYVTDTSVILNDALDQGKRVL
                     FEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGP
                     FPTELHDEIGDRIREIGKEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVL
                     SGLETLKICVAYDLDGERIDHYPASLEQLKRCKPIYEELPGWSEDITGVRSLDELPEA
                     ARNYVRRISELVGVRISTFSVGPGREQTNILESVWSSK"
     gene            37163..37486
                     /gene="yajC"
                     /locus_tag="U1041_000105"
     CDS             37163..37486
                     /gene="yajC"
                     /locus_tag="U1041_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEM4767251.1"
                     /translation="MEGLFLPLVMVAMIGFMFYSQRKQQKQRQEALNQIKKGDEIVTI
                     GGLFGIVDEIDDKKVVLDVDGVYLTFERGAIRNRVASSDTTSAVVEEVAVETTEATPE
                     SAIEE"
     gene            37600..38355
                     /locus_tag="U1041_000106"
     CDS             37600..38355
                     /locus_tag="U1041_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEM4767252.1"
                     /translation="MFKFNFKKKESIETAIEVPKHIAVIMDGNGRWAKKRMQPRIMGH
                     KAGMDALQKVTKTASDLGVKVLTVYAFSTENWSRPEKEVKFIMNLPVEFYDKYVPELH
                     ANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGLILNFALNYGGRDEVTRAVKAIA
                     QDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVIRTSGELRLSNFLPWQTAYSE
                     LYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV"
     gene            38365..39171
                     /locus_tag="U1041_000107"
     CDS             38365..39171
                     /locus_tag="U1041_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEM4767253.1"
                     /translation="MTNDLQKRVIFGGIALAIFIPFLLAGGMAFQFFVGLLAIIATAE
                     LIKMHRLAPNSIEGVLAMLASLVLALPLQNYLTFLPTDGNYTAYAIVVFLLLGSTVFN
                     IGHYNYSDVVFPIASSFYVGIGFHSLILARMAGLNKVFFALCLVWATDIGAYLIGRQI
                     GRRKLLPKVSPNKTVEGFVGGILSAVVVAIIFLIVDKSLLAGYSFGMMLLLVVIFSIF
                     SQFGDLVESAIKRHFGVKDSGKIIPGHGGILDRFDGMIFVFPIMHFFGLF"
     gene            39181..40440
                     /gene="rseP"
                     /locus_tag="U1041_000108"
     CDS             39181..40440
                     /gene="rseP"
                     /locus_tag="U1041_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEM4767254.1"
                     /translation="MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKI
                     FAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKTGSPASLSLNEAGVVTRINLSGK
                     QLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
                     QNATVWGKLITNFAGPMNNFILGIFVFIMLIFAQGGVADPTSNAVSITDGGALQNVGL
                     VTGDKILSVNGQATDTYTDIATIISQAASEASTAPSFDLVVEHEGTEKSLTVTAEKVD
                     DSYRIGISPILKTGFLDKIIGGFQQAGATAVIVVTALKNLIANFDVKQLGGPVAIYSV
                     SNQAAANGWFSVFNLMAMLSINIGIFNLIPIPALDGGKIVMNILEGIRRKPLKPETES
                     YITLAGVAIMVVLMLVVTWNDIMRVFF"
     gene            40764..42617
                     /locus_tag="U1041_000109"
     CDS             40764..42617
                     /locus_tag="U1041_000109"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000814078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEM4767255.1"
                     /translation="MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLP
                     LANRVIEKAKNIMREEFDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGS
                     DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQPKYRDEKRPRNGLLRGREFIMKDG
                     YSFHASYESLDQTYDDYKAAYEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAITPDRT
                     DLDRWVVLDKSVASFEEIPEDVLETIKEELLSWSVSGEDTIAYSSESGYAANLEMATS
                     EYKPSTAVVVEEDLVKVATPDAETIDEVAAFLNVAEEQTIKTMLFMADGEPVVALLVG
                     NDQVNDVKLKNHLGADFFDVASPADAEKVFGAGFGSLGPVGLPENIKIIADRKVQDVK
                     NAVVGANEDGFHYTGANAGRDFQVTEYVDIREVKEGEPSPDGHGVLNFARGIEIGHIF
                     KLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVNKTPKGEYR
                     YAWGINFPKELAPFDVHLIPVNVKDEAVMELTQSIEASLVGAGYEVLTDDRNERVGVK
                     FSDSDLIGLPIRVTVGKKAADGIVEVKIKGTGDTVEVHVDQLLETLNILNK"
     gene            complement(42663..43037)
                     /locus_tag="U1041_000110"
     CDS             complement(42663..43037)
                     /locus_tag="U1041_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HEM4767256.1"
                     /translation="MTKVGILLVSHSKNLAQGIIDLVSEVANDIPITYCGGLEDGSIG
                     TSFEIVQERVEANPADTLLAFFDLGSARMNMELAADFTDKQILIQTVPVVEGCYTAAA
                     LLQAGADLNTILDQLQELEIKK"
     gene            complement(43034..43609)
                     /gene="dhaL"
                     /locus_tag="U1041_000111"
     CDS             complement(43034..43609)
                     /gene="dhaL"
                     /locus_tag="U1041_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HEM4767257.1"
                     /translation="MDAKTALTWMEKFNEKIQTNKDYLSQLDSPIGDGDHGGNMARGM
                     AAVIQELSEKDYETADQVFKVVAMQLLSKVGGASGPLYGSAFMGITKASQAGADLADT
                     LQAGLEMIQKRGKAELGEKTMVDVWIPVISALRESQLTTEIIHKAVQGTKDIVATKGR
                     ASYVGERSIGHIDPGSFSSGLLFEAMLEAGL"
     gene            complement(43620..44609)
                     /gene="dhaK"
                     /locus_tag="U1041_000112"
     CDS             complement(43620..44609)
                     /gene="dhaK"
                     /locus_tag="U1041_000112"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HEM4767258.1"
                     /translation="MKKIINQPEHVVDEMLKGLVFMHQDLVDRIDGFDVIIRKAEKTG
                     KVGIISGGGSGHEPSHAGFVGKGMLSAAVCGAVFTSPTPDQILEAIKAADEGAGVFMV
                     IKNYSGDIMNFEMAQELAEMEGIEVASVIVDDDIAVENSLYTQGRRGVAGTILVHKIL
                     GHAAETGKSLAEIKELADRLVPQIKTIGLALSGATVPEVGKPGFVLEEDEFEYGVGIH
                     GEPGYKKEKLQPSAKLAEELVEKLAEGFNIQDGEHYGVLINGLGATPLMEQYVFANDV
                     AQLLAKKGVVVDYKKIGNYMTSIDMAGLSLTLIKLEDPSWIDALQAPVEVVAW"
     gene            44756..45301
                     /gene="dhaS"
                     /locus_tag="U1041_000113"
     CDS             44756..45301
                     /gene="dhaS"
                     /locus_tag="U1041_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase transcriptional
                     activator DhaS"
                     /protein_id="HEM4767259.1"
                     /translation="MPTSLITKKRIAKAFKKQLSQKSFDRISVVDIMQEAGIRRQTFY
                     NHFLDKYELLDWIFETELQEQVTDNLTYISGIKLLDELLYYIESNQSFYRQLFEIKGQ
                     NDFVSYLEGYFMVLMEKIINEYQLQEGKMISQQDKHFLILYHANAWIGLIKEGLTQSP
                     CQIHGYWKQMVALVRESFLIL"
     gene            45312..46301
                     /gene="dhaQ"
                     /locus_tag="U1041_000114"
     CDS             45312..46301
                     /gene="dhaQ"
                     /locus_tag="U1041_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DhaKLM operon coactivator DhaQ"
                     /protein_id="HEM4767260.1"
                     /translation="MVFIRNRQVTIIEDYLDGFCRTNPKVKKVKGLPIVLQKVQDDHL
                     VPIISGGGSGHEPAHIGFVGKGMLTAAVYGEIFTPPTAEEVLATIRAVDKGKGVFLIV
                     KNFEADLISFRKAIELARQEGIAVKYIVSHDDISVDTKNNFRMRHRGLAGTILLHKIL
                     GAAALTGYSLDELEQLGLSLATEIATIGFATKSAYLPNAALPLFDLEEGQISYGIGIH
                     GEEGYRTVRFESSEQLANEIVNKLKLKFRWKEGEDYILLVNNLGSMSEVEQGIFLNDI
                     CQFLELEGLQLSYIKTGKFMTSLDMGGISVTLCRVKDQKWLDFLEAPTEAAAW"
     gene            46418..50809
                     /locus_tag="U1041_000115"
     CDS             46418..50809
                     /locus_tag="U1041_000115"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HEM4767261.1"
                     /translation="MSDKFQLLLQQIGMPLDARQSGAFSTATIEKVVLHKVSKLWEFT
                     FRFETPLPLMDYQLFKARLATEFEKVGNKIQFSIVSDAEAFEAGLVEAYYPEAFTEDL
                     CQSAGFKALFQPLEVAYRDGVLWIKGPETIDTVHFRKNHLPNLVEQYKRFGFGNLAVD
                     IEVCQEMTQQQAAAFHAQNEEIYQQANEENLAALEQLAQMAPPPEAAQPFVPEYKKNR
                     PAKVNIEKAEITPMIEVDSEENRIVFEGLVFEVEQKTTKTGRVIINFKMTDYTSSFTL
                     QKWAKNEEEAQKFDMVKKGNWLRVRGNVETNNFTRDLTMNVQEVQEVKKEIRKDLMPE
                     GEKRVEFHAHTNMSTMDALPAVEDLVARAAAWGHKAVAITDHGNVQSFPHGYHAARKA
                     GIKPLFGMEANIVEDSVPIVYNEADVVLSDATYVVFDVETTGLSAVNNALIQIAASKM
                     HKGNIIAEFDEFIDPGHPLSQFTTELTGITDEHVRGSKPLEQVLREFQDFCQDSVMVA
                     HNATFDVGFMDVNYERAGLPTISQPVIDTLEFARNLYPDYKRHGLAALTKRFGVALEH
                     HHMANYDAEATGRLLFIFLKDTLEKHNLTNLNQLNTELVAEDSYKKARVKHATLYVVN
                     QVGLKNIFKLVSLSNTKYFEGVPRIPRTVLDAHREGLILGTACQEGEVFDDLLSKGLD
                     DAVKTAAYYDFIEVMPPALYAPMIAKEQFKDMAEIEETIKQLIEVGRRAGLPVLATGN
                     VHYIDPEEEIYREIIVRALGQGAPINWTIGNGENAQPAPLPKAHFRTTSEMLDEFAFL
                     GESLAREIVITNPNAMLDRFEDVQVVKTDLYTPYIEKAEETVAELTYQKAFEIYGNPL
                     PDIIDLRIEKELTSILGNGFAVIYLASQMLVQRSNERGYLVGSRGSVGSSFVATMIGI
                     TEVNPMPPHYVCPNCQHSEFITDGSYGSGFDLPDKDCEECGTKYKKDGQDIPFETFLG
                     FDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEENAFRAGTVGTVAAKTAYGFVRGYERD
                     YGKFYRDVEVERLAAGAAGVKRTTGQHPGGIIVFPDYMDVYDFTPVQYPADDVTANWQ
                     TTHFNFHDIDENVLKLDVLGHDDPTMVRKLQDLSGINPQTIPADDKGVMALFSGTEIL
                     GVTPEQIGTPTGMLGIPEFGTNFVRGMVEETKPTTFAELLQLSGLSHGTDVWLGNAQD
                     LIKAGIADLSTVIGCRDDIMVYLMHAGLPPKMAFNIMERVRKGMWLKISEEERNSYIQ
                     NMKDNKVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHYPIYYYCAYFSIRAK
                     AFDLATMSGGLERVKAKMEEIALKKKNNEASNVEQDLYTTLELVNEMLERGFKFGKLD
                     LYKSHATDFLIEDDTLIPPFVAMDGLGENVAKQVVAARAEGEFLSKTELRKRGGLSGT
                     LVEKMDEMGILGKMPEDNQLSLFDDLF"
     gene            50954..51556
                     /locus_tag="U1041_000116"
     CDS             50954..51556
                     /locus_tag="U1041_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM4767262.1"
                     /translation="MSNFAKLQETRRSIYALGKDLPVSNEEVVALVEKAMKEAPSAFN
                     SQSSRAVVLFGAESEAFWNEIAYSELEKVTPAEAFEATKGRLASFAAGAGTILFFEDQ
                     DVVKGLQESFPLYAENFPIWSEQAHGINLYAVWLAFAEKNIGMNVQHYNPLVDAQVAE
                     KYGIPANWKLRAQAPFGSIAAPAADKDYMADGDRVKVFGN"
     gene            52033..53274
                     /locus_tag="U1041_000117"
     CDS             52033..53274
                     /locus_tag="U1041_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEM4767263.1"
                     /translation="MVLPNFKENLAKYAKLLVSTGINVQPGHTVQLTISVEQAELARL
                     IVKEAYAHGAKEVLVNWLDDVIARERLVNVDVELLEQVHPQRITEMNYLLERKASRLV
                     VLSEDPGAYDGVDPEKLSRNARALSQALNPMRQASQANKISWTLGAASGLEWAKKVFP
                     NAASDEEAVDLLWDQIFKTCRIYEEDPIKAWEEHEARLVAKAKVLNDEQFVKLHYTAP
                     GTDLVLGMPKNHLWEAAGSVNAQGEHFIANMPTEEVFTAPDYRVADGYVTSTKPLSYN
                     GNIIEGIKVTFKDGEIVDVTAEKGDEVMKKLVFDNAGARGLGEVALVPDKSPISQSGV
                     TFFNTLFDENASNHLAIGQAYAFSIEGGTEMSQEELKEAGLNRSDVHVDFMIGSNKMN
                     IDGIREDGTRVPIFRDGEWAI"
     gene            53330..53563
                     /locus_tag="U1041_000118"
     CDS             53330..53563
                     /locus_tag="U1041_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEM4767264.1"
                     /translation="MLASIIAGAIIGLIAGALTSSDDRRGCLGNIILGLAGSWIGQLL
                     FGDWGPQFAGMALVPSVFGAVLLVAIFSSSRRN"
     gene            53950..55512
                     /locus_tag="U1041_000119"
     CDS             53950..55512
                     /locus_tag="U1041_000119"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019804979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEM4767265.1"
                     /translation="MRVIEFLDTTLRDGEQTPGVNFSIKEKVTIAKQLEKWGISAIEA
                     GFPAASPDSFEAVRQIAAAMTKTAVTGLARSVKSDIDACYEALKDAKYPQIHVFIATS
                     PIHREFKLQKTKEEILAQITEHVSYARERFEVVEFSPEDATRTELDYLLEVVQTAVDA
                     GATYINIPDTVGFTTPQHYGEIFRYLTTNVKSDREIIFSPHCHNDLGMAVANTLSAIK
                     NGAGRVEGTINGIGERAGNAALEEVAVALEIRKDFYDVTSPIVLKETLNTSELVSRFS
                     GIAIPRNKAVVGGNAFSHESGIHQDGVLKNPLTYEIITPELVGVKKNSLPLGKLSGRH
                     AFVEKLKELDLYFEEGDVASLFARFKKLADKKEKITDADIRALVAGTEISNRDGFQFK
                     DLRLDSQSDGSIQAQVIFINQDEEEVVVAESGKGSVEAVFNAIDQFFHQEISLERYHI
                     DAITDGIDAQARVLVAVENKATETIFNASGIDFDVVKASAIAYIHANVMVQKENSGQM
                     DKKLSEKELPTS"
     gene            55521..56573
                     /gene="leuB"
                     /locus_tag="U1041_000120"
     CDS             55521..56573
                     /gene="leuB"
                     /locus_tag="U1041_000120"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEM4767266.1"
                     /translation="MTKIIVALAGDGIGPEIMEAGLAVLEAVAGQVGFDYEIEERAFG
                     GAGIDAAGHPLPDATLQACRQADAILLAAIGSPQYDNAAVRPEQGLLQLRKELGLFAN
                     IRPVKIFDSLKDYSPLKADRLDGVDLVMVRELTGGIYFGEHILETDQASDSNTYQAEE
                     IERVVRSAFDLAQKRRKKVTSIDKQNVLATSKLWRKVADEVAKDYPDVTLEHQLVDSA
                     AMLLITNPSRFDVLVTENLFGDILSDEASVLTGTLGVLPSASHAVAGPSLYEPIHGSA
                     PDIAGQGIANPVSMILSVAMMLEESFDLVQAGQTIRQAVEAVFAEGIFTKDLGGTAST
                     KEMTAAIIEQLERRST"
     gene            56570..57961
                     /gene="leuC"
                     /locus_tag="U1041_000121"
     CDS             56570..57961
                     /gene="leuC"
                     /locus_tag="U1041_000121"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEM4767267.1"
                     /translation="MSGKSIFDKLWDRHVITGQEGQPQLLYVDQHYVHEVTSPQAFQG
                     LRDTGRPVRRPDLTFATFDHNVPTVDIHNIRDVISKAQMDALAKNIEDFGIPHAAHGS
                     EHQGIVHMVGPETGRTQPGKFIVCGDSHTATHGAFGAIAFGIGTSEVEHVLATQTIWQ
                     VKPKRLLVEFVGQAQRGVYAKDFILALIARYGVDCGLGHVVEFAGPVIDRLSMEERMT
                     ICNMSIEFGSKMGIMAPDQATFDYLRGRECAPADFDAAVADWKELYSDADTVYDKHLV
                     LDVSDLAPMVTWGTTPAMGVSFDETFPAIRDHNDERAYAYMDLAPGQKAADIPVGYVF
                     LGSCTNARLSDLQLAARIVKGRKIAEQVTAIVVPGSRPVKRAAEKLGLDKIFMEAGFE
                     WRDPGCSMCLGMNPDKVPAGVHCASTSNRNFEDRQGFGAKTHLCSPAMAAVAALYGRF
                     VDTRQLDILKEGV"
     gene            57961..58554
                     /gene="leuD"
                     /locus_tag="U1041_000122"
     CDS             57961..58554
                     /gene="leuD"
                     /locus_tag="U1041_000122"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019768698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEM4767268.1"
                     /translation="MHQFTTWTGTTVPLMNDNIDTDQLLPKQFLKLIDKKGFGKYLLY
                     AWRYLDDNYTDNPDFILNQPEYQGASILISGDNFGAGSSREHAAWALADYGFKVIIAG
                     SFGDIHYNNDLNNGILPIIQPKEVRDQLAQLAPNQEITVDLADQLIRTPFGEFPFDIE
                     QDWKHKLLNGLDDIGITLQYQDLIAEYEGNRPSYWQN"
     gene            58614..59399
                     /locus_tag="U1041_000123"
     CDS             58614..59399
                     /locus_tag="U1041_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002276310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HEM4767269.1"
                     /translation="MTKQIHWDGALSQEGFDIIKGEGGVIVCPTKVGYIIMTADKAGL
                     ERKFDAKERKRNKPGVVLCGSMEELRELAQLTPEIDAFYQKHWDEDILLGCILPWKPE
                     AYAKLQAYGDGREELMTDVRGTSCFVIKFGVAGEQIAKEMWEKEGRMVYASSANPSGK
                     GNRGKVEGIGERIASKVDLIIEADDYVASIQPDKTVETRYEQGVMVSMVDKDGKLIPE
                     QGADSRSISPCPVVIRKGLDIDKIMMHLSDHFNSWDYRQGEYY"
     gene            complement(59460..60320)
                     /locus_tag="U1041_000124"
     CDS             complement(59460..60320)
                     /locus_tag="U1041_000124"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767270.1"
                     /translation="MRWDYGSVYKSIRKSKHLSQEQICGDYLNRTTLVRFEKNQTIPS
                     YELMRFLLKQVDMTFEEFEYLCNYYQPSQRQQLLYDIDNLRNPTTKTMEDLIKRCQDH
                     LKKEPNDIPIHRKCLLLETVVAVRKSSSITQLSDEAETLSKLLWSELERYDNWYHNDI
                     ILVGTLLSKISSLDSLEETANLLLKRLEKYKDYKKIQPTILSHYRSLSYFFLEQRQYN
                     KSTFFATKLMELAKQEKRYDQLARAYVYLGIAQNKQELVEKGLQILELTDEKRLVDNL
                     KSLIKQHQTD"
     gene            60779..62833
                     /locus_tag="U1041_000125"
     CDS             60779..62833
                     /locus_tag="U1041_000125"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012235.1,HMM:NF014717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4767271.1"
                     /translation="MLEIDGIILRYGSRILLNETSLQFKRGNVYTISGPSGIGKSSLL
                     NKIGLIATDLGDMSYSYDGHPLNLTDGEAVSNFIAQHIGFIFQEKNLIRQFSVYDNLA
                     LLVKSQSEADDLDDRVDECLKKLGLLDKKYTFPYDLSGGEEQRVAIARAIVTDKDIIL
                     ADEPTNSLDKENREKITNLLVELAHHYQKIVIIVSHDDEVIKYGDVHIRFLDQRIEQE
                     EKNTFKKEGARDIYNLSIKQKIDLPKRKFPISKIVTGLLIFFVALSSMMFNITGLFQS
                     HYQQLLDNSLENGFLVMNDNLGIKGKQVYDDFLSFTTDEVEFLADSVAILNVTPYLEF
                     PYQGLTFENPEQSTQQINPEITLNGKTITLSSPYSIQPLFQTNMTERNIEYIDRTTKQ
                     GLIVSESFIATQNLSSELGTFPRITLDYYVPVALYEGEMTTDTGEILDSDGNIYVKQR
                     REFKIIGILKNSYPFQYSIYGNSFFMMADEMLHLQQELQQDEELPEVLGGLSVSSWQS
                     SAYHIKIKNSTAVSEEIDRIKQLPSVTIVSSAEDYQSLKDILAYVRKVSTYIGLVILL
                     LMGLCLFFVFFQVSNTRKEEVGILKAIGFNSKAVRRFYYRELVQYAISVGSMALLVSF
                     LLVVLLAFSLDLDIRDIVRVMILNVITLPLVSFGVIVTSGLLPIYKACQKSPVDCIRL
                     NR"
     gene            62843..63214
                     /locus_tag="U1041_000126"
     CDS             62843..63214
                     /locus_tag="U1041_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000680907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767272.1"
                     /translation="MKKFSLKAILITLLVICFQAQPVSAGYVNATRHINGHSLVGLHV
                     LNVTFHASGYSNPTSGSVTNMYFTDWAWFPNTISDRKTWTSSIPYGQRANGSVLIGVG
                     VNSPWGAVNLFGGQKYLSIDF"
     gene            63370..64254
                     /locus_tag="U1041_000127"
     CDS             63370..64254
                     /locus_tag="U1041_000127"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4767273.1"
                     /translation="MLKVVDVCKRYGAHQVLSYVSFELQAGDLVALVGPNGVGKSTLL
                     NIISNTETADRGSVTINGRPNSDRAIFQDMSVMLDAQALYPQLTGYDHLTYVAATHKL
                     GKKEVDALVEELGMGYYVKKRVAGYSMGMKQKLLFAMAVLPKPKLLLLDEPHIGLDPT
                     NIIQQREFLLNLQAEGVAILLSSHHLSEIEKLTNQVYFLKASKLIATEVELTADYDYH
                     LAVENSKQVQEFLRDYPQLLWKKAEQGLVEIFLPERDLLDCLDCIPIQQVAGLTKASD
                     YMESLYRDLYVEEGGEGT"
     gene            64251..66593
                     /locus_tag="U1041_000128"
     CDS             64251..66593
                     /locus_tag="U1041_000128"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767274.1"
                     /translation="MRLNFEIKKILWSPLYCLLVLGFLGLAYLPISQRQVHQATYVET
                     YKEELSELASVLVDIKIEEGSEEAPRMVGLKSDIESVGQALDEGKFEAIPNYRKLMYQ
                     DLDYFISRNRQLFQTRNSLTQTEVERLARWNDWLIEYQVPDGPENKAWSTGRIVQAYL
                     ESLFGFLPVFLVLGFLLANQLSEKTLAHQVWQLRQWDSLSLQGIRRLVASLLSLLLAV
                     GIGLLFIMVYDGLTGQLAVSSFQAPVEILGQSQLIGSWLYGLILLGFWLVLLLAVRLL
                     FGFLDHLLASRLTFVVTGLLLAVVLSYQAGAVAGWSGQVFPLLAFPSFLDTAGFSQVF
                     LQVDVFLLLTIGLFFAYYVLTEKKRLVLSVGHQKEWETGPLDKDWSFEILILSRINSW
                     KGLVLVNLLLALLFSLLTGLEKQEVAQEERVSMELVAQSYEQDGAYVESLQSEINRLR
                     QLVKEDASYQEELEWRVELLQEYHIYKDLYVKQWQVYQEKPQALPASHLAMLEAEQVY
                     LWAREEKAFANGDIGASQTVDNLRRYQTRNQVSQHYWKQLMEAGVPATKRGKDVILTS
                     LENRFDTNDAFVPVDDPSWDRSRDLSGIGSLRSLFDGPAYLVVLLLAVWIGSRGKAVE
                     VAGKNWRLYQTQPVDLRQVLFTKWLLGLGQALGFTVFFLVSLFLVNSLVGGIGYLEDG
                     LILLSHSERGIFLELLRGQELWAWFLPNAPYLLWMVLGLLVLEIVLVSLNHLLQVRFS
                     NRLVVFILLAGLLSLLDYLLFQDLVLDGQEIFRQLALLFS"
     gene            complement(66638..67252)
                     /locus_tag="U1041_000129"
     CDS             complement(66638..67252)
                     /locus_tag="U1041_000129"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEM4767275.1"
                     /translation="MSVIERLTKAAHLIDMDDIIREGHPTLRQVAEEVAFPLSDQEII
                     LGEKMMQFLKHSQDPVMAEKMKLRGGVGLAAPQIDVSKRIIAVLVPNPEDEEGNPPAQ
                     AYSLQEVMYNPKIVAHSVQESALEGGEGCLSVDREVQGYVVRHARVTVDYMDKNGEKH
                     RVKLKGFNAIVVQHEIDHLNGVMFYDRIDPEHPFAVKEGMLVIE"
     gene            67382..68545
                     /locus_tag="U1041_000130"
     CDS             67382..68545
                     /locus_tag="U1041_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4767276.1"
                     /translation="MKRILEKASLLALSTMLVSTFAVSPAIPQMIEHFAQQGIAAAQV
                     ENLITVTSFAIMVTLLANGLVVRFLSERNIIIAGLLLMAIGGALPMFLTAYPLILLAR
                     ILLGLGIGLINARAINIIGNFFTGQERVQMMGLRGSAEVLGSAGLTLLVGWLTQFGWQ
                     PAFLVYLFALVILALFLLFVPKEELLARMEVKVEENAPKVKLDKTMWMMGIYLAFLAF
                     FVINVNTFLTIRIPQIVLAKGIGTAQQASLILSLMQVMGIVAGTVFSSLVGRLKGWLL
                     AVSYVVFGLAVVGIAFADNLWVLGLGGMVSGFFYSIILTIVFSQVTDRAPKALLNAVM
                     TIVLMGCNIGGATSAILPTYLEKLNPTPTGAFGIYAIGCALISAGLIYKQLKK"
     gene            69072..69242
                     /locus_tag="U1041_000131"
                     /pseudo
     CDS             69072..69242
                     /locus_tag="U1041_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028520.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
     gene            69249..69698
                     /locus_tag="U1041_000132"
     CDS             69249..69698
                     /locus_tag="U1041_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767277.1"
                     /translation="MDYFYIMPLPQDLALDIANQWCYQPPLDAYTISANPDTYAEMIS
                     PEARGDRFFAVIRNAALMGYFCIDQDGETVDIRLGMKPSLTGQGNGRAFYQTIEDYLV
                     EHVQPASIKLTFASSHQVAQKLFHALGFAEREKQAEYIKMEKKLVCD"
     gene            69689..70417
                     /locus_tag="U1041_000133"
     CDS             69689..70417
                     /locus_tag="U1041_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004185339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM4767278.1"
                     /translation="MRLDKFLVDCGVGSRTEVKKLLKSKQVTVNGQVETSPKQQIDEK
                     SDQIALAGQVLSHETFVYYLLNKPKGVISATEDDRHRTVLDLLDDTARQKEVFPVGRL
                     DIDTHGLLLLTNNGQLAHAMLSPKKHVDKRYRAQVDGIMTQEDVERFAAGIELKDFTC
                     QPAQLTILSTDEAKQTSLVDITIREGKFHQVKRMVQACGKTVTDLQRLTMGPLSLDPK
                     LALGEYRRLTETELTSLEVFGVEL"
     gene            70423..70932
                     /locus_tag="U1041_000134"
     CDS             70423..70932
                     /locus_tag="U1041_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767279.1"
                     /translation="MFKCLRALPLILVAGAVVYLSIWMWIDNGDWTYIIARLSGMTEK
                     HANNLSLIAIAIQSLFFTSDWFYSRIRAFLNRRLEKARGLNRQIYLGYKAGVELLMAL
                     PKRTILFSIYLILTILENLGVIDSAKDYAVVIVFIIAVDRVTKIWPEEKRRMIEFSQK
                     IKKRIKSVG"
BASE COUNT        19562 a        14193 c        17306 g        19915 t
ORIGIN      
        1 cgagttcttt cccactccca tttagcgaat atcttgacca acttctgaaa aaggggtaaa
       61 ctgtatgtac aaaacgtcta tacaaaggag ttgggaataa tgggagcaac acaacaggta
      121 aactttaggg cagattcatt ttattatcag cagacaaagg agctattagc aggagaaagc
      181 atgacagttt cagatgtgct gaatgcgacc ttgagaaaaa ttgcgacagg tactattgat
      241 gcccaagaat ttgtcacaaa agacagtagg gaggatagca acaagattgc ttttgaagag
      301 ttaaagaaag aaatcttgtt agggcatcag gatattctag caggtaagac aagttctctc
      361 gtggctgtca gaaaggaatt tggtcttgac tgataagaaa aaatatgagc ttgttatttc
      421 tgatagagcc aaacaggatt tgcaggctat atatgattac attctgatca atttttacag
      481 ccaacaagca gcggctagca aaattgattt gatattgaag gctttggaaa tattagagct
      541 attccctgaa gtctgtccct tggtatctag cagaggattt ggcaacctaa ctgccgatgg
      601 aaagccctac cgttatatgc cgatagaaca ttatctcgtt ttttatttca tagagggcta
      661 tcaggttttt gtagcccgta tcttgcattc aaagcaaaac tggataacat tacttaaatg
      721 atttgaagcc aaataattag cataaagtat caccccaagt catcaactct gacttggggt
      781 ttctcgttta tcatgcggag gaagggattt gaaccctcac acccgatggg cacatgcgcc
      841 tgaagcatgc gtgtctgccg ttccaccacc tccgcttgtt ttttattata ctattttttt
      901 cttgacttgg ctaggggaaa atggaatgat tatcaaacca tgatcacatg atcacatgtt
      961 catcagacca tttataccac ccccgctaca atagtagaac aaggaggaaa atatgaagaa
     1021 aatcatcaag caataccaag aaaaaggatc tgttgtcatt ggctacgctc gtgtgagttc
     1081 gagggacaat cggcaagaac tggggctaga agttcagaaa ggagccctac acttctgtga
     1141 cagactctac atggaaaagg aatcgggagg tcatcaagac cgcccacaac ttcaaaaagc
     1201 tatcaagcta gccaaagcct gtgctgaaag cgggatagag accagatttg tagtctataa
     1261 gctagaccgc ctaaccagaa agatgctcca tctgtctgct atcatctcag acttgaccag
     1321 ccatcagatc cgcctgcaat ccgtccacga acaaatcgaa actgactcgc tgacaggtcg
     1381 attcttctgc ctcatgctag gctatgtggc agaatgggaa ctccaagcca tttctgaccg
     1441 taccaaagat ggtctgcgta aggccagaga acgtggtgta aaattgggca ataagggtat
     1501 atcaaaatca aaagaaaaac aagtgattca gagctatgtt gtagaagaaa caaccatccg
     1561 agacatggtc aagcagctca atatctcaac agcgaccatc tatcaggtct taaaacgaaa
     1621 taatatccca tttcgtcgtc aaaaagcaca taattctttg acagaaacag gacaaaatga
     1681 taaactgtaa gcgaatatat gtgttttagc agacggtcgt ttggtaaaac aatcaaagtt
     1741 gtcaatagaa aatattcaaa atgctgattt gacgggcttt tcaagcctta tcaagttggc
     1801 attttttgat ttttcgatgt tttagttaac gacccttaac taaaacaagt ataaacccta
     1861 ttgtagcagg tttttttgga taaaaatgaa aaaggaagtt ggaaaaacat gaaaaaaata
     1921 gtcacaaaaa aaatcggtat agcccttgct tgcactacac tccttggcgg agttatagca
     1981 cccgtagcta ttccggcttt tcaaaatatt gttcatgcag aagaaacaaa tcagcagccc
     2041 atctctgttc tagtggctgc agtttctgta gaggatgaca ctcagttgcc tttttataat
     2101 gtaactataa acccagggga gacaaagaca atctccgcgc caaaagttga gggatggaag
     2161 ttggatcaat acaccgatcc aacttatgaa ctcacctatg atcaagcctt aaaaacccta
     2221 aactctgttg gcctcgtatg ggtacagttc ttgatgatta aagacgctgc tccgacaacc
     2281 aaagatccag taatttttac tgttgctcac agggtggctg gtggtgatga ccttttacta
     2341 gacaatgcgg tcgtaaatcc aggtgaatct atcacgctta caccgatcgc agtagatggg
     2401 tatattgcaa gagccgacaa taagtatact tatacttatg acgaggttgc tactgggtcc
     2461 agctctctgt ttgttgcaga gattctttat gataaggttg cagttgaaca accagccgaa
     2521 caaccagttg aacaaccagc tgagcaacca gccgaacagc cagccgaaca accagctgaa
     2581 accaaaccag ccgaacaacc aactgaacaa ccagccgaac agccagctga attaccaacc
     2641 gaccagccag ctgaacaacc cgttgaacag ccagctgacc agccagttga acaacccgtt
     2701 gaaaaacctg ctgaagttcc agttgaacaa cccgttgaac agccagttga acaacccgtt
     2761 gaacagctag ttgaacagcc agttgaacag ccaactgaac agccagctga agttccaact
     2821 gaacaaccag ttgacactcc gacagaccaa ccagttgaac agctaacaga tgcctcgtcc
     2881 ttaactgatc agacagctgg caaggttcaa gtagtggcag caactgataa gaaaatggta
     2941 gacaagtccg ctccaagcac tcctgctgtt aaaccagagg aaggctctca gactactgcc
     3001 aaaaccttac caaaaacagg tgatagcagc tctatgctcc tagtcttagg gggcgtcttg
     3061 tccagccttt ctggtctagg attagctgcc acatcacgca aaagagacta gtccatctat
     3121 gtataccaag aaagctctcg tttgagggct tttctagtgc acatatttcc attggcaaga
     3181 aaatactagc tgtgcaggac ttagctttac tccctttttc ctaggaaatt tggtataata
     3241 gtagcaagta cacacaaagg agtcttcatt gcaaggaaga attatcaagg ccttggctgg
     3301 tttttactat gtcgaggcgg atggacagat ttatcaaacc agagccagag gaaattttcg
     3361 taagaaaggc caaacgccct acgtgggtga ttttgtggac ttttctgcgg aggaaaactc
     3421 agaaggctac attttaaaga ttcatgagcg gaagaatagt ttggttcgac ctccaattgt
     3481 caatatcgat caggcggtgg ttatcatgtc cgctaaggaa cctgatttta atgccaatct
     3541 actggatcgt ttcctagttc tccttgaaca gaaggatatg gatcccatta tctatatctc
     3601 taagatggac ttggtggaag atcggacgga gatggatgct ttcaaggcta tttatgaaaa
     3661 aattggctat ccatttgtct atagtttgga ggaattgacg ccattattgc aggataaggt
     3721 gacggtcttt atgggccaga caggggttgg gaaatcgact cttctcaatc gcattgcacc
     3781 agaattagcc ttggaaacag gggcgatttc agatagtctg gggcgtggtc gccataccac
     3841 tcgtgcggtc agcttctaca atgtcttcgg tgggaaaatt gcggatacgc caggtttttc
     3901 atccctagac tatgaagtca aggaggcgga ggctctgaca gattgttttc cagagattgc
     3961 ggaagccagt caggactgca aatttaggac ctgtacccat acccatgagc cggattgtgc
     4021 ggtcaaggaa gctgttgcca gctctgccat ttcccaaagt cgctttgaca attatctcca
     4081 attcctcagc gaaatccaaa atcagcgtga aacctatacc aaggtaagta agaaattcaa
     4141 atagaaagtt ggtactctat gtcacattat aagattgccc cgtctatttt ggcggcagat
     4201 tatgcaaatt ttgaaaaaga gctcaagcgt ctagaaaaga caggtgtgga gtatgtgcac
     4261 attgatgtca tggacggtca tttcgtgcca aatattagct ttggagcgga tgtggttgcg
     4321 gctatgcgtc ctcatagcaa gctggttttt gattgccatc tcatggtgtc taatcctgaa
     4381 aatcatattg agacctttgc tcgagcaggt gcggatatct tgactattca cgcagaagca
     4441 acggttcatc tacatggaac cctacaaaaa attcgtgcgg ctggtatgaa ggtgggtgtg
     4501 gtcatcaatc caggcactcc tcttgtgacc atcgagcctg tgctcaactt ggtggatcag
     4561 gttctgctca tgacggtcaa cccaggtttt gggggtcaag cctacattcc agaagtggct
     4621 gagaagattg aggccctggt caagctccgt gaagctaagg gattgaactt tgatattgaa
     4681 gtggacggcg ggattgacga taagaccatt cattcagcca aaaatgcggg tgccaatgtc
     4741 tttgtggctg gttcctatct cttcaaagga gacttggatg ccaacgttgc caaactgaga
     4801 gctgccctca atgattaaga ttgctgtcat tgcaggcggt tcctttgact gccttcctga
     4861 gcctgccgac ctctatgtgg gggtagatgc aggctctctt cgtcttctgg accactccct
     4921 gcctcttgac tgggctatcg gtgattttga ctcggtgaca cctgaagaat tagggcggat
     4981 aaaggatcta gcagagcgtt ttttgcaagc tcctgctgaa aaagatgata cagacttgga
     5041 gctggcttta aaggaaatct tcaaggcgta tccgcaggct caggtacgca tatacggagc
     5101 cttgggtggc cgcatggatc acatgatggc caatctcttt ttgccagctg agccggactt
     5161 ggctgcctat atggagcaga ttgaattggt ggacagtcag aacgtcgtcc gttttcgacc
     5221 agcaggcagg caccgtttgt caccgattgc tggtatgaag tacatttcct ttatgccgtc
     5281 ggaccagagt cacctgacca ttcgtcatgc caagtacccg ctggatgcca gcaattattt
     5341 tttcaaaaaa tgctattcct ctaacgaatt tatagataga gacatagaca ttcaactgga
     5401 tcagggttac gtggtcctga tctacagtaa ggacaaggat tagatggata ttgtactact
     5461 tattttgctg atactggtct tgcttgcctt ggtttttctt tatggaaaat ggcagagctt
     5521 ggccctgctt ttgcaagaac aggcagaaga cactgcagac aacttgtctg accagctcag
     5581 ctatcaacta gaaaatgcaa ccctcaaaca gcagcaggtc attcatcagg aggtggaaag
     5641 actccgcacg gagctttacc aacagctaac cgacatccgt caagagctga ataagagcca
     5701 cttggaaacg cgagatgcta ccgaccgccg tttgcaggcc attcaggagt ctaatgaaaa
     5761 acgcctggaa gaaatgcggc aaacagtcga ggaaaagctg gagaaaaccc tgcaaacccg
     5821 cctacaagcc tcctttgaaa cggtgtccaa gcagttggaa tcggtcaatc gtggtctggg
     5881 tgaaatgcag acggtggcgc gtgatgtggg gagtctgaat aaggtgctgt ctggtaccaa
     5941 aacccgtggc atcatgggtg aattgcagct gggacaaatc attgaggata ttttgacacc
     6001 tagccaatat gagcgagagt ttgccacggt ttcaggctct agtgagcgcg tggagtatgc
     6061 ggtcaagcta ccaggacgga cggaaggcga ctatatctat ctgccgattg actccaagtt
     6121 tccgctggca gattactacc gcttggaaga tgcttacgaa agtggggaca aggaccagat
     6181 tgacctccat cggaaaaatc tcttggcggc tattaaacgt tttgctaagg atatccagag
     6241 caagtacctc aatccacctg aaaccaccaa ctttggtgtc ttgttcttgc cgaccgaagg
     6301 gctgtattca gaagtggtcc gcaatccgat tttctttgat gagcttcgcc gtcaggaaaa
     6361 tatcgtggta gcaggaccga ccacactttc tgccctgctc aattccctct ccgtcggctt
     6421 taagaccctc aacattcaac ggtcggccga tgatatttcc aaggtcttgg gcaatgtcaa
     6481 gctggaattt ggcaagtttt ctgacctctt ggtcaaggct cagaaacagc tcaatcaagc
     6541 cagcagcaat attgacaaac tcctaaccac tcgcactaac gccatcgagc gtagtcttcg
     6601 taccattgac ctgtacgaag atgaccaaac caagggactg cttggcctgt ccccattaga
     6661 tgaggaagat aatgaaaatt aaccaaatga aaaaagatga attcttcgaa ggattctatc
     6721 tgattaagac tgctgaagtc cgtcaaacac gggctggcaa agactatcta gctctgacct
     6781 tccaagatga tacgggcgag attgaaggca aggtctggga tgcccagcca gggaaaatca
     6841 aggactttac tgctggaact gtagttcaca tgcaggggcg ccgtgaggtt tacaacaaca
     6901 cccctcaggt caaccagctt gttcttcgtt tgccaaaggc aggcgagcca aatgatcctg
     6961 cagattttaa ggaaaaacct cctgttgatg tcaaggacac caaggactac ctgagccaga
     7021 tgattttccg cattgaaaat gcgacttggc agcggattgt gcgtgctctt tacagcaagt
     7081 acgacaagga attttattcc tacccagctg ccaagaccaa ccaccacgcc ttctattcag
     7141 gcctgtcctt ccatacagcg accatggtcc gcttggcgga tgctatcggt gatatttatc
     7201 ctcagctcaa caagagcctg ctctttgcag gaatcatgct tcatgaccta gccaaggtga
     7261 ttgaactgac aggccctgat aacacaggct acactgtccg tgggaatctg attgggcata
     7321 tttccctgat tgatgaagag attaccaagg tcttgatgga attgggcatc gatgacagca
     7381 aagaagaagt gactattctg cgccacgtta tcctcagcca ccatggcctc ttggagtatg
     7441 gtagcccagt ccgtccgcaa gtcatggaag cagagatgat tcacatgatt gacaacatcg
     7501 atgccgaaat gatgatgatg ttgacggcct tagacaaggt cggaccaggc gagatgacca
     7561 gtcgaatctt tgctatggat aaccgtgcct tctacaagcc aaacctagac tgatgaccgt
     7621 gaagatagtc gcacgtgaga gcctcacaaa aggctggtcc acggaccaaa agtacaaggt
     7681 ccagctagaa gatagtcgct ttggtctgtt gagaatagca gagcggccag cctatgaggc
     7741 taagcgatta gagtttcagt tagttgaaaa cctgtttggt ctaggtttgc ctgtggcaga
     7801 gccaatcgcc ttttggacgg atgacttgtc agtctacatc ctctatgaat gggtggaagg
     7861 tcaggatatg aatgaagtgg cttctagttt gtctgattct gtcttatatg atttgggctg
     7921 tcagtcaggg aagtttttgc gaatcttgca tgccctaccg attgatcaaa gtcaacggga
     7981 ctggaacagt ttttatcagg ctaagattga taataaatta gctgcctacc aagcagctag
     8041 tcattcctac ccaaatggtt ctgctatgat agactttgtt caagccaacc gtcacttgct
     8101 ggcaggaaga ccaattgcct accatcatgg agattttcac acaggtaact tcctactggg
     8161 tgcggatggg aaactgaaaa tattagactt tgatcgctac gacataggag acccctggga
     8221 agaattcaac cgtttgattt tcacggcaga tttgtctcca gcctttgcgc gtggtcaggt
     8281 agatgcctat ttgaaggcgc tattccagag gaattttgga gactcatggc tctttatgta
     8341 acagtaaata gtctaggcgc tctttcttgg gcagagcgcg tagatcccct ccaaatcccc
     8401 ttgatgcagg aacaggcggg caccatctca gaatggtatg cggactttac tcgctggatt
     8461 ccaacgtggt atctacaagt ttatagctaa atacgaaaaa gcgaactttt tcaagaaaaa
     8521 aggttcgctt tttgtgtttt tatgtgctat aataggaaaa agccaaaaag gagaacaata
     8581 tgaaattaag aagaagtgag cgtatggttg tcatttccaa ttacctcatc aaccaccctt
     8641 atgaattaac tagtttgaat acctttgcgg aaaagtatga atctgccaag tcatctatct
     8701 cagaggatat tgccatcatt aaaaaggctt ttgaggaaag ctctatcggg catattgaaa
     8761 ccattacagg tgccagtgga ggagttgttt ttactccatc gatctctaag gcagagtctg
     8821 tcgaaattgc acaggccctt cgtgatcaga tggccgaaag taatcgtatc ttgccaggcg
     8881 gttatatcta ttcatctgac ttgctgtcta caccacatat tttgaaaaat gtcggtcgta
     8941 ttattgctaa tgcttttaag gaagaaaaga ttgatgcggt catgacagtt gcgactaagg
     9001 gggtcccttt ggccaatgct gttgccaatg tccttaatgt accgtttgtg attgtgcgtc
     9061 gtgatttgaa aatcacagaa ggttcaactg tttctgtcaa ctatgtgtca ggatctagcg
     9121 accgtatcga aaagatgttc ctgtctaagc gtagtttgaa ggcaggaagc cgtgtcttaa
     9181 tcgtcgatga cttcttgaaa aatggtggta ccatcaatgg tatgattagc ctcttgtctg
     9241 agtttgactc aaccttggta ggcgtggctg tctttgcaga aaaccaaaaa ggggaccgta
     9301 gcgtagctaa ctacaagtct ttgctcgctg tgaccgacat caatgtcaaa gaaaatcgcg
     9361 tggatgttga gttgggaaat atttttgaat aacatacatg caaaaaagag ctggtttttc
     9421 agctcttttt tactattctt tcaaaactct ccgaccgtgc ttccacgctg atttcttcga
     9481 gtgtcagcgg gtgggtcagg ctgagttttt gggcgtggag catgaggcgg ggggctacga
     9541 ctcgactgta aagtgggtcg ccgattagag cgtgaccgtg gtgggctaga tgaactcgga
     9601 tctggtgggt ccttcctgtc tggaggcgac aagagaccaa actattttta ccaagggtct
     9661 tcaagaggcg gacctgggtc agtgccacct gtcccttgcg attatcgacc acccgctttc
     9721 tacggtcgtg ccggtcccgt ccgattttat cggtgatgat ccaatctgtc ttttttagct
     9781 ggccttggca gagagctaga tagtcacggt agatgacctt gtcctccaaa agacgattga
     9841 gaatgggtag gataaaggga tttttagcaa agagaatggc tccgctggtt tccatatcta
     9901 gcctgtggac tacatagcag gtctgaccga cataggcgga tacatggttg agcagggcaa
     9961 tttctgtcgg ctcattgccg tgggttttca tgccttcagg cttgttgacg ataatcaaat
    10021 gctcatcctg atagagttcc tccaccaagt ccgcctgtcc cagaggaata cttttttcag
    10081 gataatcttc ctggtcaaag gtcaattcca gcaggtcgcc tgcggcaatc gggctctgcc
    10141 agtttatcag ctcaccgttg acacggacgt gtttcttggt gcggaggaag tggcggattt
    10201 ttctgggaat gagaaaataa tcttccaaga cctccttgac agtcagttgg ggaaaggctt
    10261 ggggaatgcg aatgtcaatt ttcatcttat aggctggtcg agtgcttggg ttgcactttt
    10321 tcgtttggat tgaggtagtt catggcattg ttaacagcgg ttggggcttc gccaagacca
    10381 gtcgcaatca ggtcgatctt gccctcgtag aagcaacagt caccgatggc atagatacca
    10441 gggacggagg tttcttgctt actgttgacg gtaatgcggt ggcgattgag ttccaatccc
    10501 cattctttta gcgtgccgat agatgatttg aaaccgtagt tgacaaagag gtggtcgaaa
    10561 gacagggtca gcttgtcttc gctcttaact ttatcgaaat caatggcaga agctctgcca
    10621 ttttccccag aaagcccttt agggataaaa ggtgtgtgaa tagtaacgct ggactgcttg
    10681 agctcttcta cgctgtgctc gagggctcgg aaattatcac gacggtggac gatctgggta
    10741 gtcttggcaa ttttttcgaa ggccagggac caatcgaccg cagagtcacc gccacccaag
    10801 acgacgatgt ccttgtcagc atactgctgg atgttggaca cgtggtagtg gacattgtca
    10861 aagctgtcag caccatcaat ctccagtgga cgaggcttga aggcaccgcc acccatggcg
    10921 ataatcaggg tcttggtttg atggctacct ttattggtcg tcaggctaat ggtttcccca
    10981 ggttcgatag cagtcagggt ttcattgagg caaatagttg tgtcaaaggg cgccagttgg
    11041 gccaggaggt tgtcggtcaa ttcctgtccg gttaggcttg gaaaggccgg aatgtctaaa
    11101 atggtcttct caggatagag aatggcaggc tgaccaccca gttggggcag ggagtcaatg
    11161 attttgacct tggcttgacg gaggtgggcg tagaaggcgg cgaagagacc gactggtccg
    11221 ccaccgatga tagtaatgtc atatacttgt gtcatgggaa tcctcttctt tgttcagaat
    11281 gaccctattt tatcatattt ttggaaaatt ttctctgtca gttgtcacaa gttatcgcag
    11341 gcttttttct gctagttttt aggaaatggt gtataatggt acaaaattca ctagaaagag
    11401 gtaaagtatg gacgatttgc aacatcagcc gattgaagtt ccagaagatt tccaaattga
    11461 tcatgaagac cgaccgagcc gtcgccgcag gggaaatcgt ggctctgttg ataaaccaaa
    11521 gaaaaaatca cgtattccgg agccgattcg taaattttgg cgccgttatc aactgactaa
    11581 aattttaatc attttaatgg tcctgacagt tcttacagta ggtggctatc tatttttcct
    11641 tgcaaagaca gctaatgttg gtgatttaca acaggcgcta aaagccacaa cgattattta
    11701 cgataaagat ggtgcggaag ctgggacatt gtctggtcag aaggggacct atgtagagct
    11761 ggatgctgtc tctgataatt tagagaatgc cgttatcgct acagaagatc ggagcttcta
    11821 caaaaattca ggcattaatt accagcgtac aattttggct gccttgacgt taggtcggtc
    11881 tggaggtggt tcaactatta cccagcaatt ggcaaaaaat gcctttctaa ctcaggatca
    11941 gaccatcagt cgaaaggctc gagaattctt tttggctctg gaaatcaata aaaagtacag
    12001 caagcaagaa attttgacca tgtatctcaa caatgcctac tttggaaacg gtgtttgggg
    12061 agtggaagat gcaagtcaaa agtacttcgg tattccagcc agtgatctta ctcttgagca
    12121 agcggccgtc atagcaggta tgctcaaggg acctgagatt tataatcctt attattctct
    12181 cgaaaatgca gttaatcgtc gggatacagt cctgcaaaat atggtcaatg ctggttatat
    12241 tgatcaagcg actgcagatg caggtttcca agtagaccta gccagtcagc tttcagatac
    12301 ctatacaggg aaacaaagca attattccta tccatcctat tttgatgcag tgattgctga
    12361 ggcgattgag cgatacggac tgaaagaatc agacattatt aataacggct ataggattta
    12421 cacagagatg gatcaaaatt ctcaagccag catgcaggtg atttttaatg atgagactat
    12481 gttcccaaca tcaagttttg atggtaccca tgctcaggct gccagcgtag ctcttgaccc
    12541 taggactggt ggagttcgcg ccttggttgg tcgagttaac agttcagagg atgcggtctt
    12601 tcggactttc aactttgcga cacaagccaa gcgcagtcct ggttcaacaa tcaagcctct
    12661 tgttgcctat gcgccagcgg tagcagcggg ttgggcaatt gatacaccat tggataacca
    12721 tacagaaacc tatggggatt ataccttaca caactatgac tattcaactt cggataccat
    12781 tccaatgtac caagctttag ctttatctta caatctgcca gttgcatata ttgtaaatac
    12841 ctttgggatt gacaaagctt ttgaatttgg tcaaaagttt ggtcttgata tggaaaatgt
    12901 tgaaaaggta cttggtgcgt caatcggatc aggtgtggaa acgaacccct tgcaaatggc
    12961 tcaggcctat agtgcttttg cgaatgatgg tgtaatgaag gatgctcatc taattacacg
    13021 tattgaaaca gcgagtggaa aggtattggc tcagcatcgc gagacaagta caaaagtaat
    13081 tgaccgctcg gttgcagata aaatgacctc tatgatgctt gggacctata cgaatggttt
    13141 aggtgtatct gcagatgcga cgaattacta tcttgcagga aaaacgggaa caaccgaaac
    13201 aagttttgat gtaaatcttg ttaatgacca gtggtatatt gcttatacac ctgatttggt
    13261 tatcagtcaa tgggttggtt ttgaacagac ggatgagaat cattacattg atagcagtag
    13321 ctactggatg gctccgtctg tcttccagac tgtagccaat tcaatcttgc catatactgc
    13381 aggaactcag ttcgaagtag aaaatgccta tgcacaaaat ggtattgtag aagtagctcc
    13441 agatgaagct gcgcaaactg aatcaagcct tggtcaagag caggtacaag aaatttcaga
    13501 tcaggcgaaa aacttgattg agcaaaccaa acaaaatcta atcgatgccc agttaccaga
    13561 acgagcaaaa accttgtggg ataacattac gtcttggttt ggagagttgt caaatccata
    13621 aaaacatggt agaatgaaaa agatggaggg ctttatggca ctaaaaaaag caagcctagc
    13681 ctgtactgtt tgtggttctc gaaactattc aatcagcctt tcgagcaatc ccaagccaac
    13741 acggttagaa gtaaataaat tttgtaaaca ctgtggacaa tacactgttc acaaggaaac
    13801 cagataggag tcacgcatga aatttatcaa agacattatc cgcattttaa aagatacgtc
    13861 ttggccaact cgtaagcaga gctggacgga tttcgtgtct gtagtggaat atactgcctt
    13921 tttcgtagcg gtggtttacc tctttgactt gattttgtca cgaggaatca tgagcttgat
    13981 caatcttttc tagaaaatac ttgccatttg taaaatggaa gtgatataat aaggaaaagc
    14041 gaaagccttc gggctttttt tagcgtctaa aaattccgtg tttccaaaga aaggaagtaa
    14101 caatgtacga tagttttgat aaaggctggt ttgttttaca gacctactca ggatatgaaa
    14161 ataaagtgaa ggaaaacttg ctccaacgtg cccacactta taacatgttg gaaaacatcc
    14221 ttcgtgtaga aattccaact cagactgttc aggttgaaaa gaacggtgag gtcaaggaag
    14281 tagaagaaaa ccgtttccct ggttatgttt tggttgagat ggttatgacc gatgaagctt
    14341 ggtttgtggt tcgtaatacg ccaaatgtta caggtttcgt gggttcacac ggtaaccgtt
    14401 caaaaccaac tccacttttg gaagaagaaa tccgtcaaat cttggtatct atgggtcaaa
    14461 ctgtgcaaga atttgatatt gatgtcaaag ttggcgacac tgtgcgtatc atcgacggtg
    14521 ccttcaccga ctacacaggt aaaatcacag aaatcgacaa caacaaggtt aagatggtta
    14581 tctctatgtt tggtaatgat accattgctg aagttaactt gagccagatt gctgagttgt
    14641 aataagttgt taaagcgcag ggagacctgt gctttttctt gtttttgagg gcgcaaattc
    14701 aaaaaaaact tgccaaagat ttaaaaattt tatagaatta ggtataccta acttataaat
    14761 taattaatct taaaaaacgg aggttttatg aaacagaagt ggtctcagat tgagaataaa
    14821 caacgcttta gtatcaagaa gttaagtgtc ggtgtggcat cggtatcaat aggatttttt
    14881 atcacaggta ttccgatggt tcaagcagat actagtggag aaggattgga gtctacggtt
    14941 gcggtcgcaa cggatatgga tagtaggcca gattctgtgg cagagaaaaa agaagatgga
    15001 ccattatcag atgagccagt taacacggat caggtggatg aaccagttgc tgaagaggga
    15061 gtggtcgaag aagttgtaga cacagaggca gatgaagagc cgggtctttc cgtagatcga
    15121 gctgcgaccg agataaaaac tacagctggt aagacaacag atgagtcaag ggaaaaagaa
    15181 gacattagcg gaaaagaagc tagtgctcct caaacaagcc cgcaggaatc acagcttgag
    15241 ccagaagagg tgacaagagg gcgctatatt ttacaatttt ccgacgagaa ccgaaatctt
    15301 gtattggata aattaaagaa aattgatggc gttaaaattg ttcatgagta taaggaggtt
    15361 ttaacgggag catctgtaga ggtggggaaa gaaagtttgt ctgatgtgaa ggcaattacc
    15421 gaattaacct ctttagaaga gagtcgccgt atcagaccga ctcttcatac tgctaaacag
    15481 ctggttggtg ccttaaaagc aagttctaaa tatcagacag atggtcgcgg aatggtgatt
    15541 gcagtcattg actctggttt ggatattaag cacaaagaca tgaggttgga tgaaggtgtc
    15601 gtccctaaaa tcaaggaaat tactccatct acgacaggga catacacact gaaagttccc
    15661 catggctata attacgtatc cggtaatgat aatctctacg atgataccca cgaaccacat
    15721 ggtatgcaca tagcaggaac cctggctgga aatgcaacag acgaagaagt tgcgtctaaa
    15781 caggggattg atgggattgc tcccaacgca caactgctag tctataagat tttttcaaat
    15841 gaccctaaaa attataaagc tgagacggag gatgctgctt atgctgctat tgaagatgct
    15901 atcaaacacg gggcagatgt cattagtttg agcgttggtt attatgatag cgggctgcca
    15961 gggaatgctt actacacgat tgctaagagg gcagcagaaa aggggattat cattacagca
    16021 gctattggta atgctggtgc ctcctcttca gacacctcct ttgacttgca tacaaataat
    16081 gccttaggag ctgtggatac ggcaacaaca gttggtgtgg cagcgactcc cgcagttatc
    16141 ggggttggtt cggcaagaaa tacccatctt gttcaacgtg aatttatgct gaatggacag
    16201 tcttttggct actatcctat tggctataca acgcttacag agggaaaata tgaatttgta
    16261 gatgctggaa atggtcgctg ggaagaagtg caggggcttg atttggctgg taaagtagcg
    16321 attatcaaaa aagataagtt tgacttgaaa gatgccgttc gtaatttgaa attcaaggat
    16381 gttgctggaa ttattgtgat aaatactgat cagggatgga ataaggatta ttataagacc
    16441 catcagttat tggtagacga taagactttg ctttcctatt cctctatctg gggcatcagt
    16501 cttagtgggg aagatggaag gcgattatta gaagttgcca accaatcgca aggtaacact
    16561 ggtttggttc ttaaacctac aattggaatg aagaagttaa ttgaagtgcc gactgtatca
    16621 ggtttttcta gttggggtcc tacggtcaac ttagaattga agccagagat tgtggcacca
    16681 ggggaggatg tttatgcaac cttgaatgac aatcgttatg gctccatgtc agggacttcg
    16741 atggcttcgc caattgtggc gggtgccagt gcacttttat tgccacggat tcgccaaatg
    16801 acaccaccag aaggcatgac taggatggat ttgctgagaa tcattttgat gaatactgct
    16861 acccctttga ttgatgttct agattcatct gggcatgctt tggaaaattc tccgagacaa
    16921 caaggtgctg gtctgctgca gatcgataga gcctttgaaa cagatgtgat tcttcaccac
    16981 cgtctaaaag gaggggtgga attaaaagaa atagggcgtg agacagaatt tgaggtgacc
    17041 ttggaaaatc tgggaaacca acaaagaaac tttgctattt cagctgggaa agtattgact
    17101 agtcaagatg ttcctgttga tagaatagga cgttctggaa aagtagttaa agagattcat
    17161 gcgacagaaa tcaagggttc gagtcttcat ctttctgagc aatctattca actggggccg
    17221 aaagagaaga aaaccattcg cctgagattg gatgcaggag aagcgaaaga ccagtttgca
    17281 gaagggtata tttacttcaa atcattgacg gaagggcagt ctgacatcag cattccttat
    17341 tttggctttg ttggggactg gtcaaaagaa aggattgttg atgcaccggc ttgggaaacc
    17401 agttctaaat tgaaactgac ctcggtttta tctagttata aacacaataa gtctgggcgc
    17461 tatattgaac ttgggcgtga aaagattcaa gataatcaat cgtctctaaa tccagataat
    17521 atcgcaattc aaaaccagca ttcggatagt cagattggga atgcctttgt tcgatttgcg
    17581 ctactgaggg atattaccaa ctatgatttg gatattgtaa aagaagctac agaagatgct
    17641 cctgttttga ggcggattga tacaggaact atgctgtctc gtgttcgcta tgtagattat
    17701 tttgaaagtc tttcggagta ttccaagctt cgtactccga tagaattaca ccgttgggat
    17761 gggaaagtgt acgatgcaag caaggatgaa aatgtaccag taccggaagg acaatatttc
    17821 tttagattgc gggtaaaaaa taaagaaaat ggtgcctatc agtataccta tctgccagtc
    17881 aaaattgata atcaaaagcc agaaattgtc gcgatcgata ccaatcgtct aaccagccat
    17941 agagagctgg tcgtcacagc caaggataat aataaagttt gggaggttcg agctaatcta
    18001 aatggagaag atcttcttgt tgaaaaggtt gtagatgatg caggtcaact acattaccat
    18061 ctcaaagaag tggaattgcc actcgatgct aaaaatcatc tccgtgttga agcgatggat
    18121 atagcgggaa atgtgattgc tgttgaaaca gacttagtgt cgcctgtaat ccagtttaaa
    18181 aatttggaag atttgatggc aactcgcagt aagaaaactg tagaaattaa agcgaacgtc
    18241 tcagcgcaag tttccgatgt gcaggctaac ttggatgctc aggctgtgaa ttactctctt
    18301 gagaatggtc aactatctct ccagattcca gagcaatcag atggacgtca tagttttgaa
    18361 ttaatcttga aagataaaga cggcaacctt atttacacta aaaccttgaa ttatttggta
    18421 gataatgaaa agccgacgat tgatcttgat attgaagagg atgaagaggt tatccagatt
    18481 ggcaaaaacg ggcgttttac attgaagggg aaagtgagtg ataatgttag tcttcctaag
    18541 aacatcaaac tttactattc caatctagac attggtaagg gagagctgaa attcatagat
    18601 gtaaaagaag acggcagttt tgagcaagac ttctttaaat ccgattttcc tagagccatc
    18661 atattaacag cggtagatga gaaaggcaat aaattaaagg accttcgtat caatacaagt
    18721 ccagagagtc tggatgatga ggaggaaaca gaagttccga ttactgtcaa taactggttg
    18781 attgacccga ttcgtttcaa taaagaaagt cttggtcgtg agctagatag cgagttggtc
    18841 gacttcaaaa agcaagaaga tgggacttat ctatttacat ttgaaataga agcagaaacc
    18901 gaacaagctt attctgtgcg catcaatggt ggtgaaaagc gctattttga ggatggcaag
    18961 ttgacctatc cagttaccct aattgaagag ggaaatgttg tggatataag tgtgtacaat
    19021 gaggcggatg agttgactta cacgaagaaa tatcagatgt tggttgatac agaaaatcct
    19081 gttttacagc tggaaaatga agtgctgcca ttggaaagac aggtagtgga tagtgaagaa
    19141 gatgaagacg aggaaaatca gtatgcagga gttctcctgg cagatgctga tgggcacttg
    19201 acacttaccg gaagcgccaa ggataatgga atttattggt ccttgaagat caacgaagat
    19261 tttgtagctc gaggaggctt ctggaggcag tatggaaata atgaaaaagc ctttcgctat
    19321 gagctacata gtctgaaaga cggggataca gtcaaacttg atttgagtga cagttttgga
    19381 aatgctcttg tgaagaaata taaggtacgg ttaaatgaca aggaggtatc tgagcaggtt
    19441 cctgaaaatg gccttcatgt ggagcaatca gataaggatc aagcctctag cattcctatt
    19501 tcgaaatcgg aagcgcacgt accaatgcca aaagaagaga attcgcttgc ttcgcaaaca
    19561 gaatccactg aaatcgcgct gttaactggc gatacaatag aagatggtgt ggagcatttg
    19621 gtgagactta caaaacatga ggaggcacta ggaatttctg acgagagaat agaagtgtcc
    19681 gtacctcaca gagaattatt tgaaagaagc ggaagaggag agacaagtgc attagcggcg
    19741 gatactagtg ggaaactgcc tcaaactggg gatagccttg gaagtgtctt tataagtgct
    19801 ttgttaggtc tatttggtgg agctatggcc ctcggaaatc tgaagcgaaa agaatagtaa
    19861 aaaacctagg aagattccta ggttttttag aatattaaaa ggcggtagac ggatttgaac
    19921 cgacgatcaa gcttttgcag agccgtgcct taccacttgg ctataccgcc ataacaaaga
    19981 atattgtacc ttaaatagtg aaattggtca agtggaaaaa taaacattta cagataatag
    20041 tgtctagagt aaattcccaa agtaagttct agtctgtctt aaaaactgga aattagactg
    20101 aggcaaagta ataaggtaga acttactatg ggacaagttg gttaacgatt tttgatgaat
    20161 ttatctattg ttttacttga aaatatacag gtattctgat atactaatag agttgctgtg
    20221 caacaaatac tcatctcgga ccaattgtgg tcttgttgcc gaaaggttgg gctgcaagtc
    20281 gaagttcggg agaggagaaa aaacaaaaag gagaaatact catggcagta atttcaatga
    20341 aacaacttct tgaggctggt gtacacttcg gtcaccaaac tcgtcgctgg aatcctaaga
    20401 tggctaagta catcttcaca gagcgtaacg gtatccacgt tattgacttg caacaaactg
    20461 taaaattggc tgaccaagct tacgaattca tccgtgacgc tgcagcaaac gacgcagtta
    20521 tcttgttcgt aggtactaaa aaacaagctg ctgaagctgt taaagacgaa gctatccgcg
    20581 ctggtcaata cttcatcaac caccgttggt tgggtggaac tcttacaaac tggggtacaa
    20641 tccaaaaacg tatcgctcgt ttgaaagaaa tcaaccgcat ggaagaagat ggaactttcg
    20701 acgtgcttcc taagaaagaa gtagcattgt tgaacaaaca acgtgctcgt cttgaaaaat
    20761 tcttgggcgg tatcgctgac atgccacgca ttccagatgt aatgttcgtt gttgacccac
    20821 ataaagagca aatcgctgtt aaagaagcta agaaattggg tatcccagtt gtagcgatgg
    20881 ttgacacaaa cacagatcca gatgatattg atgttatcat cccagctaac gatgacgcta
    20941 tccgcgctgt taaattgatc acagctaaaa tggctgacgc tatcatcgaa ggcaaccaag
    21001 gtgaagacag cgtagcagca gttgaagctg aattggcagc tgagccagca tctacagaat
    21061 caatcgaaga attggttgaa gttgtagaag gaaaataagt aacgaaggcg aattaaaatc
    21121 tatagggttt tagctcgtgt acaattccaa acaacaaaaa caatcctaga ggggcagggc
    21181 tgagcccgct cctctatttt ataaatacaa acaaggagaa tagacatggc agaaattaca
    21241 gcagctctcg ttaaagaatt gcgtgaaaaa tcaggtgctg gcgttatgga cgcgaaaaaa
    21301 gcattggttg aaactgaagg tgatatcgaa aaagcgattg aattgcttcg cgaaaaaggt
    21361 atggctaagg cagctaagaa agctgaccgt gtagcagctg aaggtttgac tggtgtttat
    21421 gttgatggta acgtagcagc agttgttgaa gtcaacgctg aaactgactt cgttgcgaaa
    21481 aacgctcaat tcgttgaatt ggtaaacact actgctaaag taattgcaga aggtaaacca
    21541 gctgacaacg aagcagctct taaattggct atgccttcag gtgaaaccct tgaagaagca
    21601 tacgtaaacg caactgcaac aatcggtgag aaaatctcat tccgtcgctt tgctttggtt
    21661 gaaaaaacag atgctcaagc atttggtgca taccaacaca atggcggccg tatcggtgtt
    21721 atctcagtta tcgacggtgg tgacgaaact cttgctaaac aaatctcaat gcacatcgct
    21781 gcgatgaaac caactgttct ttcttacaca gaattggacg agcaattcgt taaagatgag
    21841 ttggcacaaa tcaaccacaa aatcgaacaa gacaacgaaa gccgtgctat ggttgataaa
    21901 ccagcattgc cactcttgaa atacggttca aaagctcaat tgactgacga agtgattgca
    21961 gcagctgaag aagcaatcaa agctgaattg gcagctgaag gcaaaccaga aaaaatctgg
    22021 gacaaaatca tcccaggtaa aatggatcgc ttcatgcttg acaacactca agttgaccaa
    22081 gcctacacac ttcttgcaca agtttacatc atggacgaca gcaaaacagt tgaagcttac
    22141 ttgaactcag tgaatgcttc agttgtagaa tttgctcgtt tcgaagtagg tgaaggtatc
    22201 gagaaagctt caaacgactt tgaagcagaa gttgcagcga caatggcagc agctcttggt
    22261 aaataatcat atatagaaga acttccgaat gggagttctt ttcatattga gagctgtact
    22321 tcacgaatgt gacttgcttt acaagttcga tttacaaagt tgtacatgta caagctgtct
    22381 acggattttg aggcgaactt ggttcgcact atctccagcc ttcaaagatt ccccaaacct
    22441 ttgcagcgag tactaaaagc aaactgatag actactcgac aattcaagaa cttccgaaag
    22501 ggagttcttt tttgtaaaat cggtcttagg tctgatgcct gaacaggtcg agtgagttat
    22561 actagtatca atcctaaata tttttcataa tctccttaaa aagcaccgac ctttgtggcc
    22621 ggtgcttttt gctagctttt taagatataa gtatcccagc tgggtttgtt tggaaatcga
    22681 aagtggtcag ccaaacacat ggcgatagga tcgcagtcat cagcctcaaa gctaatttgc
    22741 tcatactgtt caaatagttg gcaaataact gcttggatga aggaatcaaa gctttgttca
    22801 tcttttccgc atacgtaggc aatttcattg ttttctacga aggcacaatt ttctgagtct
    22861 gtataaactc ggtcaggtaa gtccttctcg aattcttctt gactggtagt ccaaggattg
    22921 atgtcttgat ggactgtttg atagtggtca aaaatttgct gacaggctat ttgataaggt
    22981 gcggtgcctt tgcgagctgt gatgaggttg gtggtgtctg cttgaccaag gtagtcttgt
    23041 ttggtcactt cgaactcata acatttccgc ttgcagacaa agccagctgc ggtaaggaaa
    23101 tggattcttt cctgctctgc agaggagagc ataacctgga gagtttttcc acccaaggaa
    23161 gcctgtaggg actggaagag ctgctctgct atggtccaat cgaaatcaac caaatctagt
    23221 cgcaaataga tattggtctg gtggtaggga ttgctgtagg tatggatgtt gccgagtggt
    23281 cttccttgat aagagatgtg gaaggtgttg gcttggtagg aaatgtctag cattggttct
    23341 caataaaagc cgcaatatct tcttccgtca tgctggaatc gcagtggact tggacgccag
    23401 taggtttagc gacgaggaga cctgggacgg taggaacttg gtagtggtcg cgaagggcct
    23461 ggagttctgg actgatttgg ctggagtcga ggaagtggac ggtcacttgc ttgtcttggg
    23521 cgaccttgtg gagttttggt gcaaagcggt tgcagtaagg acaggttgct cgtccgatga
    23581 agagaacagc cccctctttg gcggctagaa ggttctgtgc ctgctccaca gtcacacttg
    23641 taaagtcttg aatgtaatct tgaaagttca tggtataaga tctaaagggc cttaagcgga
    23701 cacggaaaaa ataggaaaca aaacgacgac tagttttcgt ttatcttttt gtcctagtcc
    23761 gtagcccgta ttcagttcaa ctaaatacgg aagccctagt cctttctgtt ttttctttta
    23821 ttataggata aagcagagca gatttcaaaa ttctgctacg ctagttgcta ggcttttgct
    23881 ttcaaaattc gtcattttaa ggtataatgg tcaaagatag tcaaagaaag aggcgatact
    23941 atggcgatga agaatacatc ggattatata gaagagcata tcaaagccat cttggaccaa
    24001 gtcagtgtag ctgagttgcg tcgaagtgaa ttggccagtc ggtttgaagt ggtgccaagt
    24061 cagattaact acgtcattaa aacccgtttt acagccagcc gtggctatat tgttgagagt
    24121 aagcgtggtg gtggtggcta tattcgcatt ggtcggatta ccttttcgga taagcatgag
    24181 ctggttcacg atttattaaa taacatgggc gagcaactat ctgcgacggt ttatgcggat
    24241 attttacagc tcctttttga tgaaggattg atgacagaac gagaaggcaa tctctttttg
    24301 tccacaggat ctgatgaaat attaggaaaa gatgcaagta ctattcgagc gcgcatgatg
    24361 cgtcaaatac tacgacgttt agataggaaa gaggaataat tcatgaaaat tttaactggt
    24421 ttacagcggg tttttgaaga tgcccagtta gtggcccaac gttatgcctg tgattacttg
    24481 gaaacctggc atgttctctt gtctttcgtt atcaaccatg atacagtcgc cggcgctgtt
    24541 ttggcagaat atcctatttc aatttctgac tatgaacatg caacttttgt tgtgaccgac
    24601 aaggtctatc gtgaagagtt ggatagtttt cgtattttac catcttctaa acgtttggat
    24661 gaaacagcta gttttgccaa gaaaattgca gaagtcgtca aggctaagga gctgggaacg
    24721 gaacatttgt ttatggctat gctcttggat aagcgttcga ctgctagtca gattttggat
    24781 aaagtcggtt ttcattttga agactcagat gataagattc gttttttaga tctacgtaaa
    24841 accttggaaa cacgtgcagg ctttacaaag gaagacttga aatctatccg cagtatcatg
    24901 aagggtggga aaaacaagcc aaccaatgcg ggacagatga tgggaatgcc cccagcacct
    24961 caaagtggtg gattagaaga ctacactcgt gatttgacag ctttggcgcg tgaagggaag
    25021 attgaacctg tcatcggtcg agacgctgag attgcacgga tgatccaaat tctatcacgt
    25081 aaaaccaaga ataacccagt tctagttggt gatgctggtg tcggaaaaac tgcacttgct
    25141 ttaggtcttg cccagcgtgt cgctgctggt gatgtacctg ctagtctggc tcagatgcgg
    25201 gttttggaac ttgacttgat gaatgtgatt gcaggaacgc gtttccgcgg tgacttcgaa
    25261 gagcggatga ataatatcat taacgacatc gaggaagatg gtcaggtcat ccttttcatc
    25321 gatgagttgc ataccattat gggttctggc tcggggattg attcgacctt ggatgcagcc
    25381 aatatcctca aaccagctct tgctcgtggc accctccgta cggtcggagc gacgactcag
    25441 acagagtacc aaaagcatat tgagaaagac gcagccctgg ttcgtcgttt tgccaaagtg
    25501 accattgaag agccgacagt ggaagatagc attgctattt tggctggttt aaaaggtact
    25561 tttgagaaat accacagggt ccgtattgga caagcagctg tagagactgc tgtgacctac
    25621 gctaagcggt atttgaccag taaaaacctg ccagattcag ccattgatct gctggatgaa
    25681 gccagtgcaa cggtacaaaa tcgagtgaaa gggcaggctg aggaaacagg actgacaagc
    25741 atagacaagg ccttgatgga taaaaaatat aagactgtca gcaagctttt gattaaaacg
    25801 aaagaagatg ccgaggctag tcaaaattat gaccttgaag taacagaaga agatgtttta
    25861 gaaacactta gccgcttgtc aggtatccca gtagccaagc ttagccaatc agatactaag
    25921 aagtatctga atctggaagc agaattgcac aagcgtgtga ttgggcagga agaagctatt
    25981 tctgcagtta gcagagctat tcgccgtaat cagtcaggga ttcgtacagg tcgcagaccg
    26041 attggttcct ttatgttctt gggaccaact ggtgtcggta agacagagct tgctaaagcc
    26101 ttggcagagg ttctctttga tgatgaatct gctcttatcc gttttgatat gtctgagtat
    26161 atggagaaat ttgcggccag ccgtctcaat ggagcgcctc caggctacgt gggctatgaa
    26221 gaaggtggcg aattgacaga aaaagttcgt aacaaacctt attctgttct tctttttgat
    26281 gaggttgaaa aggctcatcc agatattttc aatgttctct tgcaggtctt ggatgatggt
    26341 gttctgacgg acagtaaagg gcgcaaggtt gatttctcca atactatcat tatcatgacg
    26401 tcaaaccttg gagcaacagc ccttcgtgat gataagacag ttggttttgg tgcccttgat
    26461 ttatctaagg accacaagga agtggagaaa cgcatttttg aggaattgaa aaaagcctat
    26521 cgtccagaat ttatcaaccg tattgacgag aaagttgtct tccatagctt gacagaatcc
    26581 catatgcagg atgttgtcaa ggtcatgatt aaacctttgt tggctgtaac agctgagaaa
    26641 ggaattaccc ttaaactgca accgtcagcc cttaagttat tagctaaaca aggttacgac
    26701 ccagaaatgg gagctcgtcc acttcgtaga ctcttacaaa ccaaattgga agacccattg
    26761 gcagaaatgt tgctccgtgg tgacttggct actggttcga ccttgaaggt tggggtcaag
    26821 ggtgaagagc tcaagtttga tgtggtaaag ggataaggag tgctcgttgt tgctatcctt
    26881 tccagatgca gaattattct tccgttttga aaaacgcatg aaatagttgg agaggtgagc
    26941 ttgctcgcct ctttaacgat tagaaaggaa atctatgaat caaaccatag ctgttgtttt
    27001 cggaactttt gcccccatgc acaagggaca cttggatttg atcgagcgag caaagttggc
    27061 ttgcggtcag gtttgtgtgg tggtttcagg ctatgatagg gatcgtgggg ataggatagg
    27121 tttagacctg accaaacgat ttcaatttgc tcaagagcag tttgagggtg atgattttgt
    27181 cgaagttcgt gccctggatg aaacggactt gcctccctat ccagatggtt gggacctttg
    27241 gttagaacgc ctgcttgctt tgttggacct gtctgaacat caagtgccag tcttctatgg
    27301 atccgaggaa gaatacgctc aagaactgca tagtcgaggc tatcaagcgc atttcagtcc
    27361 tagaaaattt ggtatttcag cgaccctcat tcgtgaacaa cctcaacaat atcaggatta
    27421 cattgctcct gcctttcttg ctttttttgg aaaggaaaga ctataaaaca acatagaaaa
    27481 aacgcataaa atcaagttat catcttggtt ttatgcgttt tttatatatg cttaaatgat
    27541 tggcaagtat caaacttctc agagtttctt acttagcaat ccgttcttga taggctgctc
    27601 tggcctggtc aaagagttct tggacctgct caatggtttc ggccttggca acggcgccac
    27661 ggatcttggc agcacctgct gaaccacgga ggtagtgggg agctaggcca cggaattcgc
    27721 ggacggcaac tgactcgccc ttgagattgg tcaatcgggt caggtggtcg aaggcgacat
    27781 tgagtttgtc atcgaaggag aggtcgggca ggacttctcc agtttcaaga tagtggttga
    27841 tttggttgaa gatgtaagga tttcccatag cagtccgtcc gaccatgaca gcatcagcac
    27901 caacttcctc gattcgctgg cgggcatctt ctacagtgcg gatgtcgccg tttgcgatga
    27961 agggaatctt ggtcaggctg ccagccacct tggtgagggt ttccaggtca acggttcctg
    28021 tgtacatctg ctcgcgggtc cgtccgtgca tggccagggc agacacaccg gcactttctg
    28081 cggccagggc attttcgacc gccaggtcgg tattgttcca acccgtccgc atcttaactg
    28141 tcagaggaat atcgaggacc gaggtcactt ccttgatgat gtggtagatt ttgtcggggt
    28201 ccttgagcca cttggcacca gcttcgtttt taacgacctt gttgacaggg cagcccatgt
    28261 taatatctac gatattagcc ttggtgttgg tttggatgaa gtcggcagcc cgtttcagtc
    28321 cttcggcgtc gccaccaaaa agctggatag acatagggta ttcgttgtca tcgatatgga
    28381 gcatgtggag ggtcttctcg ttgttgtaga gaaggccttt ttcagaaatc atttccataa
    28441 cgaccagacc agcgcccatt tccttggcaa tggtacgaaa ggccgagttg gtcacgccgg
    28501 ccattggggc cagcacgcag cgattgggga tttccacatc accaatcatg aaaggggtat
    28561 tgagattagc cattgatgag ttcctccaaa tcgttttcgt caaagtggta atgggtctgg
    28621 cagaattggc aggtgatgtc cacacctttg tcttcttcct tcatctcttt caggtctgtt
    28681 tttggcagac tggctagagc gtcgaggaaa cggtctttgg agcagtcgca gacaaagccg
    28741 atttcttctt ctgataggcg tttgaagtcg tcgtcgccat aaatggcgga tagcagagct
    28801 tctatatggt tttcagaagc cagcaagctt gaaatggcag gcatttcttg gatgcgtttt
    28861 tcaaaacgag caatttcagc ctcagtcgca cctggtaaaa cttgtagcaa gaatccgcca
    28921 gctaccttga ccttgtcttc ttcatccaac aagacattga gccccaccgc agacggtgtc
    28981 tgctggctgt ctgtcaagaa ataggcaaag tcttcaccga tttcaccaga aatcaagggg
    29041 gtcatggaat tgtaagggtg acctgttccg tagtctgtga tgaccaggaa ttgcccgtta
    29101 cccacaagtg gtccaacgat gacttcgcca gtcgctgtcc gcttgtagtc caagtctgga
    29161 ttttgaatgt agcccttgac ctgacctttg gtattggcaa cggagataac ggcaccaacg
    29221 gcaccgctgg ccaagatttt cagggtgatc ttggtgtcgc ctttttcatt ggcagccaag
    29281 atctgattgg caatgagggt acggcccaga gcaacggtgg acgacgccat ggtgtcgtgt
    29341 ttttcttggg ctgttttcac ggtttctgta ctgtctagaa caaaggcacg gaaatgcccg
    29401 ctctttgata gtgttttaat aattttatcc ataagtttaa ttatagcaca agtggaggtg
    29461 gagcagtaga aaaatgagcc tgaaagtcat gctttcaagc tcaaaaaatg attaggattc
    29521 tttttgtttt ttgacaaggc aggcgctcaa gattacgaga ccgattgtga taagtacaaa
    29581 gcttgtttct tctcctgtct ttggaaggat tttcttttga ctgttgttgg cagtaggggt
    29641 cacggttgtt tgtcccttgt ctgtagcgct agaacggtca tcagcattta tagctgtttg
    29701 attagaagtt gaaagatttg ttggcttgtt attgttggtc gtaccattgt catcactatt
    29761 attgactgtt cctgagtcat ctgtctgctt gtcgcttggt tctggttgag ttggttcttg
    29821 tgcctttgtc acatccagtt gtaccaatag cggatcgtgg tcagaagctc tgccatgttc
    29881 ttccataaag gctgaattga catggaccat atcaaaggca tagcgctcca acaagttagt
    29941 tgatactagc atattgtcaa gagactgatt gtttccgtta tagaagtaag agaagcgatc
    30001 ggatgcatcg tgacgactaa cgaggttagc cattcctcct gtttctaaaa tttctatggt
    30061 tttagtaaat tcatagtcat tgaagtcgcc tagcataacg atattagcat ttggattttg
    30121 ggctaagcct gcttttgtga agtcagcgat aatttgtgct agtatgtggc gtttttcttc
    30181 ggacttgaag ctgacaggtt ggatttttcc gtagagacca ttgtcaccgc gttttgagtt
    30241 gagatggttg gcaaggacaa cgactttctc gccgttgaag acgaattcag ctgcaagtgt
    30301 tttgcggaca gctgcccaag cagggttggt tgggtcgatt cggcccaggc tgagattgag
    30361 ttcgccgttt tcccatgcaa ttgcctgtgt tgcggtaccg attggtttgt cagataggct
    30421 gacacgtttt gagttgtaga ggaagccgac gcgaatattg cctccctctt gtccgccgtc
    30481 tttgttgttt tcaggagcaa tatccacata ggtatagatt ggtccgccgg ctgcttgaat
    30541 ggctgtaatt aggcgctcag cactcttact agcatcagtt gtgccgtcgt ttgtagcacc
    30601 gttgttgtcc tgcacttcaa tcaatccgat aatatctgga gaatgtaggt ctgaaacaaa
    30661 ggatttggca atgcgttgga ctttagcgtc tgatgttgac ttactgtcag cagagaagtt
    30721 ttcaatgtta taagaagcga tagtcagctt gtcatcattt gggataatgg ttgttgtttc
    30781 tggttttgta gttccttcgt gcaaggttgg aagggtgcta tcatctacat agactttata
    30841 attggtgtaa gagtaggtaa ctggtccagt aatacgaccg gtgaaatagt ctcctgattt
    30901 gaccatttgt tttccatttt tcaaaaggag tggaatgata ttggtattat tcccttcagg
    30961 gcgaaggttg acgcctccaa cattatttaa aggaagttga ctagtggcag gagtgacata
    31021 gatttccttg ttttttagtg gaccaaggat ttttgcatca tccacggcaa ccaccatacc
    31081 ttcaacggat tcccagaaat cgagcgcatc ttgttctgga tcaaattgag ccaaaccgtc
    31141 gttgtcgata atatctgctg ggatggtccg atcaagacca aggactatag gagatggtac
    31201 aggtgcagtc ccatccacag ttacttcagt agctcgaatt tgtgtgatgg ttaagtctgt
    31261 ttccccacgt tctgtatagc cttttccgag gtattcttct acacgtcctg cgatagtgac
    31321 aagatctcct accttgacat ttgtttttaa tttgtcagta aaaatattaa taccgtcaga
    31381 tgttttgacg tctccatctg gtgtgacatc ttgtacgtag aagttattgg cagaggtaac
    31441 gtaggttact acgacgtttt taagaatcac agattgattg gttagaggtg attggtgact
    31501 tgcaccttga atgtgaccga ctgttacagt ttcgatcttg ccaggtgctg tttctgttgt
    31561 tgccttttca acgacttcaa aatgagagag gtcaaatggt tttaattgta tttttccatt
    31621 ataggtggat aaaatagcgg ttagattaat cttatctccc ttgttgatat ggttcaaaag
    31681 atcagccgtt ttgatacctg ttcgactatc taaacgcaca tccacagttt gtccttcgga
    31741 atcagttacg gtaaaggtag aattttgata gctatcgctt tgaatatctc cgacagtcaa
    31801 gttttttaga gaaactagtg ttgcctgtgc ctgagttgct aactgagcga tgtttgtttc
    31861 tgtaatggga gcgttgaaat gctcagatat agccttgtgg ttgctaactg tggttagttg
    31921 gagttcgcct ttatactcac ccaatgttcc tgttaattga acggtatcac caggctgata
    31981 gcccaaggca gcccctgggt agatatagat accagcaccg tcagaaccct ggaggtaaaa
    32041 accatttcct ccccaaccgt ttactaggct aatgatttta ccagaaacgg tgtactctgt
    32101 tccttgtgca ccagagcgaa cagtagcaat cggtgtagaa acaaggtcat ttgactcgat
    32161 agtcgtattt tcactggttg gtggctgaac attagtagaa gatgaatcta cgatttcaat
    32221 cgctgtagct ggtttgattc cagctcgctt catgtatgta tcgctagttc ctgtgatgcg
    32281 aaccaatttt ccgactagtt cgggatgatc aacgaggttg aattggctgc gaagaggttc
    32341 ttttagttga atagggatag tgtcggcggc cgcagtatcc atgcttgcac caagggctag
    32401 atttgttttg ttagtggcgt caaaagcggt tccgctacta ttaagtggtg caataagata
    32461 gccttgtatc gtgacctccg acttggttat tgcaagcgac ggataattct ctatcgccac
    32521 ttcagtagcg tgcacagatg gtatgggcga agtggcaaga ctaagcaaga gtccggctgt
    32581 taccgctaca gaccctacgg tatagaagag agaacggttt ctaattttca tataaaactc
    32641 ctttttgtta tatatggacg ttatcaaaac gtctgcagtt gttatatata tagtttaaca
    32701 aaaaatgagt tgtttggaat acttttttta gatataatac ggatattttt aaaaattcaa
    32761 atgaaatagt aaaaatacat tagaaaacaa aacaaataac gaacgatata gcgagacgct
    32821 ggaaattggt tcataaaaag cacccagata taaatgatta tcttggtgcc atattcattt
    32881 tacttaacat tagttgggag tttaaaaggt ctgggagacc ttttaaagtg ggagatataa
    32941 gctgacggca gtcagctcac ataaattgat gtctgggaat agactgtttc agctcaacaa
    33001 ctagaaataa agacttgttg acgaactctt tttatcttgg tcgagttctt tcccactccc
    33061 agcaacctgc agctattgag gcgaacgtgc tttgccctat ctccagcctt caaaagttcc
    33121 acgaaccttt gaagtaagca ttaacaaagt aaggaaaatg gaaaactata gctctggaaa
    33181 caattttttc aaaatcttcg gcgtaatgct ctgaccaggt cctgcgtaag tataggtgtg
    33241 caggtacatg gcagggttga agttgagctc aatacaggtg cagtttggat cttccttgct
    33301 tgctggcttg gtgcggtcgg ggataatcaa gtccacacca cagacccaag ctcccatagc
    33361 agtcgccata gcggcagcca gttgcttgta ggactcgtcc atctgatcgg tcatatcaat
    33421 ggagtcacca cccgttgaga tattggaatt gccacgcaga aaggcttgaa cgccctctgg
    33481 caagaccgta tcaggtgtgt agccctgttg ctccaacatg agcagttcga tatcgcctag
    33541 attgatgatt tcaagtggcg aacgatggtc acgccctcgc agtggatctt ggtttttttg
    33601 ctctactaat tcatggatgg ttgagctacc gtcccccaca acattggctg cgacgcggag
    33661 caggacagcc tcgcacttgc catcaaggat gaagaagcgg tactcagttc ccgctacgaa
    33721 ctcctccaca agcacatggc tatcttctga aaaggcgatg tccagggctt tttcatagtc
    33781 cgcaaggctg gctggctcct ggaagataga gatgccaagg ccgaagttgg tagattttgg
    33841 tttgacaaca atagcagagc tggctacctg tccgtaatac cgcagggcat ctgtcttgtt
    33901 tgtaaattca gctcccgcag gtactggaaa accagcctgg tccaaaatct tcttggtcac
    33961 caccttgttg gccatggcga gaggaatgac gtagttgtcc ttggaggtca tgttgccatt
    34021 tttgatgtac tcgacatggt caccatgcca tagtttgaga aactggtctt cttcatctaa
    34081 aatctctaca ttcaagccca gctgaatggc gtcaaagaga atcatctggg tggagagttc
    34141 catgttttca tagcccttga gggcgtaagg ggctgtccaa gcatagtcat gaaagacttg
    34201 tccctgctgc tgaccaaact tttctagaga cccatcttca acctgctctg ctatttttcc
    34261 agaaagggtc aaacgagggt cttgaagtgc tgcctccaca tgtgcaatga gctggccata
    34321 gtagtcatcc agtccaaagt gtagaactat ggctttcatg gccgttaaga ttggcgtggc
    34381 atcggcatcg ttaggtagag gtgtgtgtgg atgactgagg gcgatgagat tgttaagttt
    34441 atctgctttt gctaaggtgt tatcaacatc tgtcagttgg tctagccaaa gaagagataa
    34501 gataaagagg tggactgtat caagggtttc ttgactaata gcaagcgggt cataggggtt
    34561 aaggtcgaag gaacggaatt ctaaataaga aatccccttg ctgaggtagt cacggctagt
    34621 ctttgctcca cgtagtcgga cggaagagta aaattccttc tcagcggata gttgaccaga
    34681 ttggacagct tgttcgatgt cggccacgta ctgttggaga gaagaaaagg aaatatgaac
    34741 atcatcggag ttgacatagc cgtacttgga attacgaatg gaacggacgc aaccgacttc
    34801 cgtggttagg aatccttttt cggctaggct acttgctcca tataggtagg ttaagagcca
    34861 acgatagttg aggaagtttt gtgctaattt gaggtagaga gtatttttga atgcgataaa
    34921 atctgtttcc tcgcttaatt caaaaagttg ttgggttaag tcttttccta attcaaaatt
    34981 ataatggata ccagacatag actggacgag cttgccatag cgttccccca aaccgacacg
    35041 gtattggtac tcatagtcgc tatctagttg agcaatttgg atttcttctt ctgaaatcac
    35101 aggaggcatg gataggggcc agaggtattc cgttttttcc atagaccgca ccgctacatc
    35161 cgtgatagct ccgaggaaac gacgagcttc cttggtcgaa tgagccacag gggtaatcaa
    35221 ttctagttgt ggctcgctgt aatcggtctg gatatagggg tggaagctac gagaacccag
    35281 tttatgagga tggggagttt gtgcaactct gtggtttgaa ttgatgcgaa gtgattcgcg
    35341 ctcaattcca aaagtagcct gaagaatggg gctgtttggt gataattttt gtaacatact
    35401 aagtccttta tatttctgtc aaagtcttac tccaatttta tctagattgg agggcaaata
    35461 caagtttctg ctacgtttct ggtgaaaaat gtactgaaaa tcactgaaag taaacaaaga
    35521 cttcggattt ctctgtcaaa agcatattta cacatgtcta cctcgtgtgt ttaatcggat
    35581 ttttttgaaa tatgctttta aaaaaataaa aacattcgct atatatgaaa ttgttggaat
    35641 ttcttgaaaa aatgttcgtt ttttggtaga atggattgta aaacgaaact tgcaggtgag
    35701 attcctgcca gaagtagaag aaaggctggg ctggtcagcc agttcagaga aagagtgaat
    35761 atgacatcag tagttgttgt aggaacccag tggggcgacg aaggtaaggg taaaattaca
    35821 gacttcttgt ctgctaatgc tgaagtaatc gcacgttatc aaggtggtga taacgctgga
    35881 cacactatcg ttatcgatgg cactaagtat aaattgcact tgattccatc aggaatcttc
    35941 ttcccagaaa agatttctgt tatcggtaat ggtgtggttg tcaatccaaa atctttggtg
    36001 aaggaaatca actatctcca tgattcaggt gtgacaacag ataatttgcg gatttcggac
    36061 cgcgcacatg tcatcttgcc ttatcacatc aaattggacc agttgcaaga agagtctaaa
    36121 ggtgagaaca agattggtac aaccaacaag ggtatcggtc cagcttacat ggacaaggca
    36181 gctcgtgtcg gtatccgtat cgcagacctc ttggacaagg agatttttgc ggagcgtttg
    36241 agaacaaact tggctgagaa aaaccgtttg tttgagaaaa tgtatgaatc aactccgatt
    36301 gagtttgacg aaatctttga agaatactac gcttatggtc aggaaattaa gaaatatgta
    36361 acagatacct ctgttatctt gaacgatgcc ctcgaccaag gcaaacgagt cttgtttgaa
    36421 ggggcgcaag gggttatgtt ggatattgat caaggaacct atccattcgt tacttcttca
    36481 aacccagttg ctggtggtgt gaccatcggt agcggagtcg gcccaagcaa gattgacaag
    36541 gttgttggtg tatgtaaggc ctacactagc cgtgttggtg acggaccatt cccaactgaa
    36601 ttgcacgatg aaatcggaga ccgtatccgc gaaatcggta aggaatacgg tacgacaact
    36661 ggtcgtccac gccgtgtcgg ttggtttgac tcagtggtga tgcgccatag ccgccgtgtg
    36721 tcaggtatta ccaacttgtc cctcaactcg attgacgtct tgtcaggtct tgagaccttg
    36781 aaaatctgtg tggcttatga cttggatggt gagcgtattg accactaccc agcaagcttg
    36841 gagcaactca aacgttgcaa accaatctat gaagaactgc caggttggtc tgaagacatc
    36901 acaggtgtac gtagcctgga tgaattgcca gaagcagctc gcaactatgt tcgtcgtatc
    36961 agcgaattgg ttggtgtgcg tatctcaacc ttctcagttg gaccaggtcg tgaacagacc
    37021 aacatccttg agagtgtatg gagctcaaaa tagtgtgcga agactgaaca aaagttcggt
    37081 ctttttctgt ttggtcgaac tttgctttct tggccagaat ttgatataat catgcttatc
    37141 aaacaataaa agaggtaaac aaatggaagg tttatttttg ccgcttgtca tggttgccat
    37201 gattggtttt atgttctatt cgcaacgtaa acaacaaaaa caacgtcaag aagcactaaa
    37261 tcaaatcaaa aaaggtgatg aaattgtgac cattggtggg ctatttggta ttgtcgatga
    37321 aatcgatgat aaaaaggttg ttctcgatgt tgatggtgtt tacttgacat ttgaacgtgg
    37381 tgctattcgt aatcgtgtag caagttcaga tactacatcg gcagttgttg aagaagtggc
    37441 agttgaaacg acagaagcaa ctccagaatc tgcaattgaa gaataaggat gagaaaccga
    37501 gggaaacctt ggttttctct tgttttagcc ctgcctgatt tttgctatcc taggtaaaaa
    37561 tatggtataa tgaaacgatt atacaataag gaaaatacca tgtttaaatt taattttaaa
    37621 aagaaagaaa gcattgaaac tgcaattgaa gtccctaagc atatcgctgt gattatggat
    37681 ggcaatggcc gttgggcgaa aaagcggatg cagccacgta ttatggggca taaggctggt
    37741 atggatgcac ttcaaaaggt taccaagacg gcttctgatt tgggagtaaa ggtgttaact
    37801 gtctatgcct tttctacaga aaactggtct cgaccggaaa aagaagtgaa gtttataatg
    37861 aatctacctg tggagtttta tgataagtat gttcctgaac tccatgccaa taatgtcaaa
    37921 attcagatga ttggtgacca ttcaaaactt cctgtcccga ctctcaatgc gctttataaa
    37981 gccgaacaaa agacaaagag taacactggt ttgattctca atttcgctct taactatggc
    38041 ggtcgtgatg aggtgactcg cgcagtcaag gctattgcgc aagatgtctt ggatgccaag
    38101 ttcaatcctg gagatataga tgagaaatta atagcggatt acctctatac aggaacctta
    38161 tcaccaacgt tacgcgatcc cgatctagtt atccgtacaa gtggtgaact tcgtcttagc
    38221 aacttcctac cgtggcaaac agcctacagc gagctgtact ttacagatat tgcttggcct
    38281 gattttgatg gagaagcact taaattagcg attaaagaat acaaccgtcg ccacagacgt
    38341 tttggcggtg tataaggaga aggtatgaca aacgatttac agaaacgagt gatatttggt
    38401 ggcattgctc tagctatttt cattcccttt ttgttggctg gtgggatggc atttcaattt
    38461 tttgtaggcc tgttagccat cattgctacg gctgaattga ttaaaatgca ccgcctagca
    38521 ccaaattcta tcgagggtgt cttagctatg ttggccagtt tagtcttggc tcttccgctc
    38581 cagaattatc tgacattttt accgacggat ggaaattaca cagcctacgc cattgtagta
    38641 tttttactgc ttggttcgac ggtttttaat atcggccatt acaactattc cgatgtggtc
    38701 tttccaattg catcaagttt ctatgttggt atcggctttc atagtttgat actggctcgt
    38761 atggctgggc tcaataaagt cttctttgcc ctctgtttag tctgggcaac agacattggt
    38821 gcctacttaa tcggtcgtca gattggtcgg agaaaattat tgccgaaggt ttcaccgaat
    38881 aaaacggttg aaggctttgt aggcggtatt ctttctgcgg tggtagttgc tatcattttc
    38941 ttgattgtcg ataagtcctt gttggcgggc tattcatttg gcatgatgtt gttgttggtt
    39001 gtgattttct cgatattctc acaattcgga gacttagtag aaagtgctat taaacgccat
    39061 tttggtgtga aggattctgg aaaaattatt ccaggacacg gtggtatcct ggatcgtttt
    39121 gacggtatga tttttgtctt tccaatcatg cacttctttg gattatttta aggaggtact
    39181 atgaagggaa ttttagcatt tatatttata tttggtgtga ttgtggttgt ccatgaattt
    39241 ggtcatttct actttgccaa gaaagctggt atccttgtga gggaatttgc gattgggatg
    39301 ggtccaaaaa ttttcgctca tacaggtaag gatgggacac tttacaccat ccgtatcctt
    39361 cccctaggtg gctatgttcg aatggctgga tggggtgaag ataagacaga gattaagaca
    39421 ggtagtcctg ccagtctcag cttgaatgaa gctggtgttg tgacgcggat taatttgtct
    39481 ggtaagcaac tggatagtct cagtttgcca atgaatgtaa ccagttttga ctttgaagaa
    39541 aaattggaaa tcacaggctt ggtcttggaa gaaagcaaga cctataaggt tgatcacgat
    39601 gccacgattg tagaggaaga tgggacagaa gttcggattg ctccacttga tgttcagtat
    39661 caaaatgcga ctgtctgggg gaagttgata accaactttg cgggtcccat gaataacttt
    39721 attttaggta ttttcgtctt tattatgctg atttttgcgc aaggaggggt tgcagatcct
    39781 accagtaatg ccgttagtat tacagacggt ggtgccttac agaatgtagg tctggtgaca
    39841 ggtgataaaa tcttgtcggt caatggtcaa gctacggata cttacacaga tattgctaca
    39901 atcattagtc aggcagcctc agaagcctct acagctccaa gttttgattt ggttgttgaa
    39961 catgagggga ctgaaaaatc gctcacagtt actgctgaga aggttgacga tagctaccga
    40021 attggaattt caccgatttt aaaaactggt ttccttgata agattattgg gggcttccag
    40081 caagcgggtg cgacagcagt tattgttgtg actgccttga aaaacttgat tgccaatttt
    40141 gatgttaagc aattgggtgg acctgtggct atttattctg tcagcaatca agctgctgca
    40201 aatggctggt tctcggtctt taacctgatg gctatgctat caatcaatat cggtattttc
    40261 aaccttatcc ctattccagc cttggacggt ggtaagattg ttatgaatat tctagaaggt
    40321 attcgcagaa aaccacttaa accagaaaca gaatcctata tcactctagc aggagttgcc
    40381 attatggtcg ttctcatgct ggtcgtgact tggaatgaca ttatgcgtgt attcttctaa
    40441 ataataactt caaatggaat tgaatgcgtg ctaaatgcag gatgttctga aaaatacgaa
    40501 aggaattgaa cacgggctaa aacctgtgta ttcctgataa acaaaagatg aaaggaacaa
    40561 aggaggtccg taattgaact cggtctaaaa actcggaaaa tagattgaga gctacgcctc
    40621 tggatttcta atcaagtaaa ctacgaaagg aattgaatgc gtgctaaaaa ctttacgaaa
    40681 aagataaacc tgcctagtgc caaaggcact gcgtcaggtt tcctattttc gtttcgtttt
    40741 cttaacgcac ttatatctta attatgaaac agtctaaaat gattatccct actttgcggg
    40801 agatgccttc ggatgcgtcg gtgattagcc acgctttgat gttacgtgcg ggttatgtcc
    40861 gtcagatatc tgctggtatt tacagctact tgcctttggc taaccgtgtg attgaaaaag
    40921 caaaaaatat catgcgtgag gagtttgaca agattgatgc tattgaattt ttggcaccag
    40981 ctctcttgtc agcggacatt tggcgtgagt caggtcgtta cgaaacatat ggcgacgatc
    41041 tttacaagct caaaaaccgc gaaggttctg actttatctt aggaccaact catgaagaaa
    41101 cggtgactct tttggcgcgt gatgcggtgc aatcttacaa gcagttgcca ctcaatattt
    41161 accaaatcca gccaaaatac cgcgacgaaa aacgtcctcg taatggtctc ctccgtggtc
    41221 gcgagttcat catgaaagat ggctacagct tccacgctag ctatgagagt ctggaccaga
    41281 cctacgatga ctacaaggcg gcttacgagg caatcttcac tcgtgcaggc ttggagttta
    41341 aggccattat cggtgacggt ggtgccatgg gtggtaagga tagccaggag tttatggcta
    41401 ttacaccaga ccgtactgat ctggaccgtt gggttgtctt ggacaagtcg gttgcttctt
    41461 ttgaagaaat cccagaggat gttcttgaaa caatcaagga agaactcttg tcttggtctg
    41521 tgtctggtga agacaccatc gcctactcta gcgaatcagg ttacgctgcc aacctagaaa
    41581 tggcaactag cgagtacaaa ccaagtacag cagttgtcgt cgaagaagac ttggttaaag
    41641 tagcgacacc agatgccgaa actatcgacg aagttgctgc cttcttgaat gttgcggaag
    41701 aacaaactat caaaaccatg ctctttatgg cagacggtga gccagttgtt gccctccttg
    41761 ttggcaatga ccaggtcaac gatgtcaagt tgaaaaacca ccttggcgca gatttctttg
    41821 atgtagcaag cccagctgat gcagaaaaag tcttcggtgc aggttttggt tcccttggac
    41881 cagtcggctt gccagaaaat atcaagatta ttgcagaccg caaggttcaa gatgtgaaaa
    41941 acgctgttgt cggtgccaac gaagacggtt tccactacac aggtgccaat gcgggtcgtg
    42001 atttccaagt gactgagtat gtggacattc gcgaagtcaa ggaaggcgag ccttctccag
    42061 atggacacgg ggttctcaac tttgcccgtg gtatcgagat tggtcacatc tttaaacttg
    42121 gcacacgtta ctcagacagc atgaatgcca acatcttgga tgagaatggt cgttctatgc
    42181 cgattatcat gggatgctac ggaatcggtg ttagccgcct cttgtcagcc gttcttgagc
    42241 aacacgctcg cctctttgtt aacaagacac caaaaggcga ataccgttac gcttggggga
    42301 tcaacttccc taaagaattg gcaccgtttg atgtgcattt gattccagtt aatgtcaaag
    42361 atgaagcggt aatggaattg actcagtcta tcgaagcaag tttggttggt gcaggctatg
    42421 aagtattaac tgacgaccgt aatgagcgtg tcggcgttaa gttttctgat agtgacttga
    42481 ttggcttgcc aatccgtgtg actgtcggta agaaagcagc tgacggcatt gttgaagtga
    42541 aaatcaaggg cacaggcgac acggttgaag ttcatgtaga tcaactgctt gaaaccctta
    42601 atattttgaa taagtaatta caaaaagccg aagtttttat acctcggctt ttaaatttgt
    42661 atttattttt tgatttcaag ctcctgcaat tggtcaagga tggtgtttaa atcggctcca
    42721 gcctgtaaga gagctgcggc agtataacaa ccttcgacga ctggtacggt ttggataaga
    42781 atttgtttgt ctgtaaaatc ggcagcaagt tccatgttca ttcgggcgct acctaggtcg
    42841 aaaaaggcaa ggagggtatc agcagggttt gcttcaactc gctcttgtac gatttcaaag
    42901 ctggtaccga tgctaccatc ttctagtccg ccacagtagg tgatgggaat atcgtttgcg
    42961 acttcagata ctaggtcgat gattccctgg gccaaatttt ttgaatggga tacgagtaag
    43021 ataccaacct ttgtcatagt cctgcctcca acattgcttc aaagagaagt ccagatgaga
    43081 aagagcctgg atcaatgtgt ccaatagacc tttccccaac ataggacgcg cgtcccttgg
    43141 tcgcaacaat atcctttgtc ccttgaacgg ctttatggat aatttccgtt gtcagctggc
    43201 tttctcttag ggcagaaata acaggaatcc acacgtctac catggttttc tcgcccaatt
    43261 cagccttgcc acgtttttgg atcatctcca aacctgcttg aagcgtatct gccaaatcag
    43321 cgccagcttg actggcttta gtaataccca taaaggcaga gccgtagaga gggccggaag
    43381 caccgccaac cttgctgaga agttgcatgg caaccacctt aaagacttgg tcagcagtct
    43441 catagtcttt ctcagatagc tcctgtatga cggcagccat tcctcgcgcc atgtttccgc
    43501 catgatctcc atcgccaatt ggtgaatcaa gctggctcaa ataatcttta ttcgtttgaa
    43561 ttttttcgtt gaatttctcc atccatgtca atgctgtttt tgcatccata agcgttctcc
    43621 taccaagcta ccacttcaac aggggcctgc aaagcgtcaa tccagcttgg gtcttctagt
    43681 ttgattaagg tcaatgacag tccagccata tcaatggatg tcatatagtt accgattttc
    43741 ttgtagtcaa cgaccacacc ttttttagcc agcaattgag caacgtcgtt ggcaaagaca
    43801 tattgttcca tgagaggagt tgcgccgaga ccgttgataa ggacaccata atgctcgcca
    43861 tcttgaatat taaagccttc tgccaatttc tcaaccaatt cttcagccaa tttagcagat
    43921 ggttggagtt tttctttctt atagccaggt tcaccatgga taccgacacc gtattcaaat
    43981 tcatcctctt caaggacgaa gcctggtttg cccacttctg gtaccgtagc acctgatagg
    44041 gctaagccga tagtcttgat ttgtgggacg agacggtcag ccagttcctt gatttctgct
    44101 agagatttgc ccgtttctgc agcgtgaccg agaatcttgt ggacaaggat ggtacctgct
    44161 acaccacgac gaccttgggt atagaggcta ttttccacag cgatgtcatc gtccacgatg
    44221 acactggcca cttcgatgcc ctccatttcc gccaattctt gtgccatctc aaagttcatg
    44281 atgtcgccag agtagttttt gatgaccata aagacgccag ctccctcgtc agcagccttg
    44341 atggcttcca aaatttggtc tggtgttggt gaggtaaata ctgcgccaca tacagcggcg
    44401 gacaacatgc ccttgccgac aaagcctgca tgagaaggtt cgtgaccaga gccacctcct
    44461 gagatgatgc cgactttacc agttttttca gccttgcgga taatcacatc aaatccatcg
    44521 atacgatcga caagatcttg gtgcataaag acaagtcctt ttaacatttc atcaacgaca
    44581 tgttcgggtt gattgataat ttttttcatg agaaaactcc tttgattttt gtttgcgctt
    44641 tcattttaca ttgtccaaaa gaaaaaagga agggacagat tgtccaatgt gtcccttttg
    44701 ttccaaagaa aagcgtgata gggtataatg gagaggaagc gaaaggaagt gacatatgcc
    44761 aacctcgttg attacaaaga aaaggattgc aaaggctttt aaaaaacagc tatcccaaaa
    44821 gtcctttgat agaatctcag ttgtcgacat catgcaggaa gcagggattc gtcgtcaaac
    44881 cttttacaac cattttttag acaagtatga gttgttggac tggatatttg agacagaatt
    44941 gcaggagcag gtaactgaca atctaaccta tattagtgga atcaagcttc tggatgagct
    45001 cttgtactac atcgagagta accaatcttt ctataggcaa ctctttgaga ttaaggggca
    45061 aaatgatttt gtcagctatt tagaaggcta ctttatggtt ttgatggaga aaattatcaa
    45121 cgagtaccag ctccaggagg gtaaaatgat ttcccaacag gataagcatt ttttgattct
    45181 ctatcatgct aatgcttgga ttggactgat aaaggaagga ctgacgcagt cgccttgtca
    45241 gattcacggt tattggaagc aaatggtggc tcttgttcgc gagtcgtttt tgattttgta
    45301 ggagttaatg tatggtgttt attagaaata gacaggtaac aattattgaa gattatttgg
    45361 atggtttctg tcgaaccaat cctaaagtga agaaagtgaa gggacttccg attgtgcttc
    45421 agaaagtgca ggatgaccat ttagttccaa ttatttcagg tggtggatcg gggcacgaac
    45481 cggcccatat tggatttgtc ggaaagggta tgttgactgc tgcagtatat ggtgaaatat
    45541 ttacgccccc aaccgctgaa gaagtattgg caaccattcg tgcagtagat aagggcaagg
    45601 gagtttttct gattgtaaaa aactttgagg cagaccttat ctcttttcga aaagccatcg
    45661 aattggctcg gcaggaggga attgcagtca agtacatcgt atcccatgac gatatttcgg
    45721 tcgatactaa gaataatttc cgtatgcgac atagggggct tgcagggacc attctacttc
    45781 ataagatatt aggagctgct gcgcttactg gctatagctt ggatgaattg gaacagctgg
    45841 gactgtctct ggcaacagag attgcgacca tcggttttgc aaccaagtcg gcctatttac
    45901 ccaatgctgc cctgcctttg tttgatttgg aggagggaca aatatcttac ggcatcggta
    45961 tccatggaga agaaggttat cggaccgttc gttttgaatc ctctgagcag ttagccaacg
    46021 aaattgtgaa caaattaaaa ttaaaattcc gctggaagga gggggaagac tatattcttc
    46081 tggtcaataa tcttggatct atgtctgagg ttgagcaagg aatctttttg aatgacattt
    46141 gccaatttct agagctagaa ggtttacagc tttcctatat aaaaacaggt aaatttatga
    46201 ccagtcttga tatgggggga atttctgtca ccctctgtcg tgtcaaggat caaaaatggc
    46261 tggacttttt agaagcaccg acagaagctg cggcttggta agttaagtat caaatgatga
    46321 acctcttttg gaatgccgaa gaggtttttt ctctctccca agaaaatttc ctctatttat
    46381 ggtaaaatgt ttctaacgaa ctacaaagga aataagtatg tcagataagt ttcaactctt
    46441 gctacaacaa atcggaatgc ctcttgatgc acgacaatca ggggcttttt cgactgcaac
    46501 gattgagaaa gtagtcttgc acaaggtcag caaactttgg gaatttacct tccgttttga
    46561 aacccccttg ccgctcatgg actatcaact cttcaaggct cgtttggcga cggagtttga
    46621 aaaggtgggc aataagattc aattttctat tgtcagcgat gcggaggctt ttgaagctgg
    46681 tttggtagaa gcatattatc cagaagcttt tacggaagat ttgtgccaga gtgcaggctt
    46741 caaggctctt tttcagccat tagaggtggc ttatagagat ggtgttttgt ggataaaagg
    46801 tcctgaaacc attgacacag ttcattttcg gaagaatcat ctgccaaatc ttgtggaaca
    46861 atacaagcga tttggttttg gcaatcttgc ggtggacatt gaagtttgcc aggagatgac
    46921 gcagcagcag gctgcggctt tccatgcgca aaatgaagaa atttaccagc aggctaatga
    46981 agaaaacttg gcggcccttg aacaactggc tcaaatggcg ccaccaccag aggcagctca
    47041 gccatttgtc ccagaatata agaaaaatcg tcctgccaag gtcaatatcg aaaaggctga
    47101 gattacacct atgattgagg tggatagcga ggagaatcgg attgtctttg agggtctggt
    47161 ctttgaggtc gagcagaaga cgaccaagac ggggcgggtc attatcaact ttaagatgac
    47221 cgactatact tcgtccttca ccttgcagaa gtgggctaag aatgaggaag aggctcagaa
    47281 gtttgatatg gtcaaaaagg gaaactggct gcgggtgcgt ggaaatgtgg aaaccaataa
    47341 tttcacccgt gatttgacta tgaacgtaca ggaagtccaa gaggtcaaga aggaaatccg
    47401 taaggacctc atgcctgagg gtgagaagcg tgtggagttc cacgcccata ccaatatgtc
    47461 tactatggat gctctgcctg ctgttgaaga cttggtggca cgtgcggctg cctggggtca
    47521 caaggctgtg gctattactg accacggcaa tgtccagtcc ttcccccatg gttatcatgc
    47581 tgctcgaaag gctgggatta agcctctctt cgggatggag gctaatatcg ttgaggactc
    47641 ggtgccgatt gtctataatg aggcggatgt ggtcttgtcc gatgcgacct atgtggtctt
    47701 tgacgtggaa acgaccggtc tttctgcggt caataatgcc ctgattcaga ttgcagcgtc
    47761 caagatgcac aagggcaata tcattgcgga atttgatgag tttatcgatc cgggtcatcc
    47821 tctgagtcag tttacgaccg agttgacggg gattacagat gagcatgtgc gtggttctaa
    47881 gcccttggaa caagtcctgc gtgaatttca agatttctgt caggattccg tcatggttgc
    47941 ccacaatgcg accttcgacg ttgggttcat ggatgtcaac tatgaacgtg ccggtctgcc
    48001 gaccattagt cagccagtca tcgatactct ggaatttgca cgcaatctct atcctgatta
    48061 caaacggcac ggtttggcgg ccttgaccaa gcgatttggt gttgcgctgg aacaccacca
    48121 catggccaat tacgatgcgg aggcaacggg tcgcctgctc tttatcttct taaaggatac
    48181 cttggagaaa cacaatttga ccaacctcaa tcagctcaat acggaattgg ttgcggagga
    48241 ttcctacaag aaggcccgtg tcaaacacgc tacgctctac gtggtcaatc aggttggttt
    48301 gaaaaatatc ttcaagttgg tttccctatc caataccaag tattttgagg gagtaccacg
    48361 gattcctaga acggtgctgg atgcccaccg cgaagggttg atactgggaa cggcctgtca
    48421 ggagggcgag gtttttgatg acctgctatc caagggcttg gatgatgcgg tcaagacggc
    48481 tgcctattac gattttattg aggtcatgcc tcctgccctc tatgctccta tgattgccaa
    48541 ggagcagttc aaggacatgg ctgagattga agagacaatc aagcagttga ttgaggtcgg
    48601 gcgtagggca ggtctgccag ttctggcgac aggaaatgtt cactatattg accccgaaga
    48661 ggaaatctat cgggaaatta ttgtccgtgc tctaggtcaa ggggcaccga ttaactggac
    48721 cattggaaat ggggagaatg cccagccagc accactgcct aaggctcact ttagaacgac
    48781 cagcgagatg ttggacgagt ttgcattctt gggagaaagc ctggcccgtg agattgtcat
    48841 taccaatccc aatgccatgc tcgaccgatt tgaagatgtt caggtggtca agaccgacct
    48901 ctatacgcct tatattgaga aggccgagga aacggttgcg gaattgacct atcaaaaagc
    48961 ctttgaaatt tatggtaatc ctctaccaga tattatcgat ctgcggattg agaaggaatt
    49021 gacctctatt ctgggtaatg gcttcgccgt gatttacctg gcttcgcaga tgttggtgca
    49081 acggtcaaat gagcggggct acctagttgg ttcacggggg tctgtcggct ccagtttcgt
    49141 tgcgactatg attgggatta ccgaagtaaa ccctatgcct cctcactatg tctgtccaaa
    49201 ttgccaacac agtgaattta tcacagacgg ttcctatggt tcaggttttg acctgccaga
    49261 taaggactgt gaagaatgtg gcaccaagta taaaaaagat ggtcaggaca ttcctttcga
    49321 gaccttcctt ggtttcgatg gtgacaaggt tcccgatatt gacttgaact tctcagggga
    49381 tgaccaaccg tctgcccatt tggatgttcg ggatattttc ggtgaagaaa atgccttccg
    49441 tgcaggaacg gtaggtacgg tagcggctaa gactgcctat ggttttgtcc gaggctatga
    49501 gcgggattat ggcaaattct accgtgatgt ggaagtagaa cgcttggctg ctggcgcggc
    49561 cggtgtcaaa cggacgactg gtcagcaccc agggggaatt atcgtattcc ctgactacat
    49621 ggatgtctat gactttacgc ctgttcagta tcctgccgat gatgtgacag ccaactggca
    49681 gaccacccac tttaacttcc acgatattga tgaaaacgtc ctgaaactcg atgtcctggg
    49741 acacgatgat ccgaccatgg ttcgcaagtt gcaggattta tcaggcatta atccgcagac
    49801 cattcctgct gatgacaagg gtgtgatggc cctcttttct ggtacggaaa ttctgggagt
    49861 taccccagag cagattggga caccgacagg tatgttgggc attcctgaat tcgggactaa
    49921 ctttgtacgg gggatggtgg aggagaccaa gccgaccacc tttgcagaac tcttgcagct
    49981 gtctgggcta tcccacggta cagacgtatg gttggggaat gcccaggact tgattaaggc
    50041 aggaattgcc gacctatcca cggttatcgg ttgtcgggat gacatcatgg tctatctcat
    50101 gcatgcaggc ctgccaccta aaatggcctt taacattatg gaacgggtgc ggaagggcat
    50161 gtggctcaag atttctgagg aagagcgaaa cagctatatc caaaatatga aggataacaa
    50221 ggtgccagac tggtacatcg aatcctgtgg taaaatcaag tacatgttcc ccaaagccca
    50281 cgcggctgcc tacgttatga tggccttgcg ggttgcctac ttcaaggttc attatccaat
    50341 ctactattac tgtgcctatt tctctattcg ggccaaggcc tttgatttgg caaccatgtc
    50401 cggtggcttg gaacgagtca aggccaagat ggaagaaatc gccctcaaga agaaaaacaa
    50461 tgaagcttcg aacgttgagc aggatctcta taccacactt gaattggtca atgagatgct
    50521 ggaacgtggc ttcaagttcg ggaaattgga cctttacaag tcccatgcga ccgatttctt
    50581 gattgaagat gataccctca ttccaccatt tgttgccatg gatggccttg gggagaacgt
    50641 tgctaagcag gttgtggcgg cgcgtgcaga gggagaattc ctctccaaga cagaactccg
    50701 taagcgtggt ggattgtcag gtacactggt cgaaaaaatg gatgaaatgg gtattctcgg
    50761 taaaatgcca gaggataacc agctcagtct ctttgatgat ttgttttaaa cttattcact
    50821 gtttcttttg gaagcagtga atttttttta aaaaatgaag tcaaacctct tgactctgga
    50881 ttagaatagg tatataatct ctacatagtg atagatacca ctaagtagta acaaatagaa
    50941 aagaggaaac tatatgtcaa attttgcaaa acttcaagaa actcgccgtt caatctacgc
    51001 acttggtaaa gacttgccag tatcaaatga agaagtggta gcacttgttg agaaagccat
    51061 gaaagaagct ccttcagctt tcaactcaca atccagccgt gcagttgtat tgttcggtgc
    51121 ggaatcagaa gcattttgga acgaaattgc ctacagcgaa ttggaaaaag taacgcctgc
    51181 agaagctttt gaagctacaa aaggtcgctt ggctagcttt gcagctggtg ctggtactat
    51241 cttgttcttc gaagaccaag acgtggtcaa aggcttgcaa gagagcttcc cgctttacgc
    51301 tgaaaacttc ccaatctggt ctgaacaagc tcacggtatc aacttgtacg cagtatggtt
    51361 ggctttcgct gagaaaaaca tcggcatgaa cgtacaacac tacaacccat tggttgatgc
    51421 acaagtggct gaaaaatacg gtatcccagc taactggaaa ctccgtgccc aagcaccatt
    51481 cggaagcatc gcagctccag cagcagacaa agactatatg gcggatgggg accgtgtaaa
    51541 agtttttggt aactagtatt cttcgaaaat tgaaaatatc cgttgtcagc ttgtcttggt
    51601 gaacttcagt tctaccttca acttcgcttc ctaggctatt ttcaattttc attgaatacc
    51661 taaaacgtac agtttgcttt attacgtcgg cagatgagga aacttcgttt ccttatttcc
    51721 aacttcaacc tcgcttttgc gtttttaggc tcaggctgaa acagttcccc gaactgtttc
    51781 actccactgg attgtttgaa ctcgctttgg cgtacttcag tacagcctgc cgcctgttcc
    51841 cttaaaacaa gagaggtgca gggttatgcc tgcggcttgt tgacacgaac tccgttcgct
    51901 ttttctccaa gcttcaacta tctccctgag ctaacctttt caacttcctg tatcagcagg
    51961 aagttttttt gtcagcccag cttcaaaata tgatacaata atagggtatc tcaaagtaca
    52021 aaggagaaaa agatggtact accaaatttt aaagaaaatc tcgctaaata tgctaaactc
    52081 ttggtgtcaa cgggtatcaa tgtgcaacct ggtcacacgg tgcagttgac aatcagtgtg
    52141 gaacaggctg agttggctcg tttgattgtc aaagaagctt atgcccacgg tgctaaggaa
    52201 gtcttggtca attggttgga cgatgtgatt gcgcgtgaac gtttggtcaa tgtagatgtg
    52261 gaactcttgg aacaagttca tccacaacgc attactgaaa tgaactacct cttggagcgt
    52321 aaggccagcc gtttggtggt cttgtcagaa gatccaggtg cttacgatgg cgttgatcca
    52381 gagaaattgt ctcgcaacgc tcgtgcactc agccaggctt tgaacccaat gcggcaagca
    52441 tcccaagcta acaaaatcag ctggacactc ggtgcagcct ctggtttgga atgggctaaa
    52501 aaagtctttc cgaatgcagc gtctgacgaa gaggcagtgg acctcctttg ggatcaaatc
    52561 ttcaagactt gccgtatcta cgaggaagat ccaatcaagg cttgggaaga gcacgaagca
    52621 cgtttggtgg ctaaggctaa ggtcctcaac gacgagcagt ttgtcaaatt gcactacaca
    52681 gcaccaggga ctgacctcgt tcttggtatg ccgaagaatc acttgtggga agcggctggt
    52741 tcggtcaatg cccaaggtga acactttatt gccaacatgc caacagaaga ggtcttcaca
    52801 gcacctgact accgtgtggc agacggttat gtaacgtcta caaaaccact cagctacaac
    52861 ggcaacatca tcgaaggcat caaagtaacc ttcaaagatg gtgaaatcgt ggacgtgacg
    52921 gcagaaaaag gcgacgaagt catgaagaaa ttagtctttg acaatgctgg tgcacgcggt
    52981 ctcggtgagg ttgcccttgt gccagacaag agcccaatct ctcaatcagg tgtgaccttc
    53041 ttcaatactc tttttgatga aaatgcctcg aaccacttgg cgattggtca agcctatgcc
    53101 ttctctatcg aaggtggtac agaaatgagc caagaagagc tcaaagaagc aggccttaac
    53161 cgttctgatg tccatgtgga cttcatgatt ggttctaaca agatgaacat tgacggtatc
    53221 cgagaagacg gtacccgtgt accaatcttc cgtgacggcg agtgggcaat ctaaaaatga
    53281 tgctataaga ctgggcgacc agtctttttg tcaatagaaa ggaagtacta tgttagcaag
    53341 tattatcgcg ggagccatta tcggtctgat cgcgggagct ttgacttctt cggatgaccg
    53401 tcgtggctgt ctaggaaata ttatccttgg gcttgctggt tcgtggattg gacagttgct
    53461 ctttggtgac tggggaccac aatttgctgg tatggctctg gtaccgtcag tctttggagc
    53521 agtattgcta gtggctattt tttcaagttc tagacggaat taatatgaac tgtaagacca
    53581 gacttctgat gaggtttggt tttatttgtg gaggaatttg cgtaaattgc tctattgttc
    53641 ggatttttca gaaaatttcc atttttctgt tgacaagtga aaaaaagtac gttatcatgg
    53701 aaaacaagta aaacacagaa aggaaaaagt caaatgaaac ctgtcactac aaaattcttt
    53761 gctttgttgt tgcgacggtc gggctagtgc tgaaagaatg cattagtcct gtttggctta
    53821 ccaagcgggc gctgttgaca acatctcgca ggtaggagtc ctcgaggtgt tttctttttc
    53881 ttagtatact ttgaaaacta agatagagaa cctaatattg aagttagggt tatttagaaa
    53941 ggtattctta tgcgtgtgat tgaattttta gatacaactt tgcgagatgg tgaacagacg
    54001 ccaggtgtga atttttctat caaggaaaaa gtgaccatcg ccaagcagtt ggaaaaatgg
    54061 gggatttctg ccattgaagc aggttttcca gcggctagtc ctgattcgtt tgaagcggtt
    54121 cgtcagattg cggcagcgat gaccaagacg gctgtgacag gtttggcacg gtcagtaaaa
    54181 tcagacattg atgcttgtta tgaggctctg aaagatgcta agtatccgca gattcacgtt
    54241 ttcattgcga ccagccccat tcaccgtgaa tttaaacttc aaaagaccaa agaagaaatt
    54301 ttggcgcaaa tcactgaaca tgtcagctat gcacgtgagc gttttgaggt ggtcgagttc
    54361 tcgccagagg atgcgacacg gacggagttg gattacttgc tagaagtggt gcagacagcg
    54421 gtagatgctg gtgcgaccta catcaatatt ccagacacag ttggttttac cactccacaa
    54481 cactatggtg aaatcttccg ttatctaacg accaatgtta aatcggaccg tgagattatt
    54541 ttcagtccgc attgccataa tgacctaggt atggctgttg ccaacaccct ttcagctatt
    54601 aaaaatggtg ccggtcgtgt cgagggaact atcaacggta tcggtgagcg ggctgggaat
    54661 gcggcccttg aagaagtagc tgttgccctt gaaattcgga aagatttcta tgatgtgact
    54721 agtccgattg ttcttaagga aacactcaat acttcggaat tagtatctcg cttttctgga
    54781 attgccattc cgcgcaataa ggcggttgtc ggtggcaatg ccttctctca tgagtcaggt
    54841 atacaccaag atggtgtctt gaaaaatcca ttgacctatg aaatcattac acctgagttg
    54901 gtaggggtca agaaaaattc tctgccactg gggaaactat ctggtcgcca tgcctttgta
    54961 gaaaagctga aagaactaga cctgtatttt gaagaaggag acgttgctag cttgtttgct
    55021 cgtttcaaaa aactggcaga caagaaggaa aaaattacgg atgctgatat tcgagctcta
    55081 gtagctggga cagaaatcag caatcgtgat ggtttccaat ttaaagattt acgtttggat
    55141 agtcagtctg acggaagtat tcaggctcag gtcatcttca tcaatcagga cgaggaagaa
    55201 gtggttgttg cagagtcagg caagggttct gttgaggctg tctttaatgc tattgaccaa
    55261 tttttccacc aagagattag cttggaacgc taccatattg acgccatcac cgacggtatc
    55321 gatgcccaag ctcgtgtact ggttgctgta gaaaacaagg caacggaaac aatctttaat
    55381 gcctctggta ttgactttga cgtggtgaag gcttctgcca ttgcctatat ccatgccaat
    55441 gtcatggtgc aaaaagaaaa tagtggtcag atggataaga aactatctga gaaagagttg
    55501 ccaactagct aggaggaaat atgacgaaaa taattgttgc cttggctggt gatggaatcg
    55561 gtcctgaaat catggaggct ggcctagcag tcctcgaggc tgttgctgga caagtaggct
    55621 ttgattatga gattgaggaa agagcttttg gtggcgctgg gattgatgcg gctggccatc
    55681 ctctaccaga tgccacctta caagcctgtc gtcaggcgga tgcgattttg ttagcagcta
    55741 tcggtagccc tcaatatgat aatgcagctg ttcgaccaga acaaggcctg cttcaacttc
    55801 ggaaggaatt aggtctcttt gccaatatcc gtccagtgaa aatttttgat agcctgaaag
    55861 actattctcc tctgaaagcc gaccggctag acggtgtgga tttggtcatg gtacgggagt
    55921 tgacaggtgg gatttatttt ggagagcata ttctggaaac agaccaagcc agcgatagca
    55981 atacctatca ggcagaagaa atcgaacggg ttgtccgctc tgcctttgac ctagcccaaa
    56041 aaagacgaaa aaaagtcacc agcattgaca agcaaaatgt actggcgaca tcaaaattgt
    56101 ggcggaaggt agcggatgag gtggctaagg actacccaga tgtgaccttg gagcaccagt
    56161 tggtggatag tgcagccatg cttttgatta ccaatcctag tcgatttgac gtcttggtga
    56221 cggaaaatct tttcggagat attttgtcgg atgaggccag cgtattaaca gggacgctag
    56281 gggttctgcc ttctgctagt catgcggtgg caggtcctag tctttatgaa cctatccatg
    56341 gttcggcacc ggatattgca ggtcagggca ttgccaaccc tgtcagcatg attctatctg
    56401 ttgccatgat gctggaagaa agttttgatt tggtccaagc gggtcagacc attcgccaag
    56461 ccgttgaagc ggtctttgca gaaggcattt tcaccaagga tctgggtggg accgcctcta
    56521 ccaaagaaat gacagcggct attattgaac agcttgaaag gaggtcaaca tgagtggcaa
    56581 atccattttc gataagctct gggatcgcca tgtgatcaca gggcaggaag gtcagcccca
    56641 gctcctctat gtcgatcagc attatgttca tgaggtgacc agtccccagg cctttcaagg
    56701 attgagggat acagggcgac ctgttcggcg tccagacttg acttttgcga cttttgacca
    56761 caacgtacca accgttgata ttcacaatat ccgtgatgtc atttccaagg ctcagatgga
    56821 tgccttggcg aagaatatag aggatttcgg cattccccac gcagcccacg gttcggaaca
    56881 tcaggggatt gtccacatgg ttggaccaga aacaggtagg acacagccag gtaagttcat
    56941 tgtctgcgga gatagccata cagcgactca cggagcattt ggagctatcg catttgggat
    57001 tggtacttct gaagtagagc acgttctcgc tacccagacc atttggcagg ttaaacctaa
    57061 gcgactccta gtggaatttg tcggtcaggc gcaaagaggc gtctatgcca aggactttat
    57121 cctggctctg attgcccgct acggcgtgga ttgtggtttg ggtcatgtgg tcgagttcgc
    57181 aggaccagtc atcgaccgac tcagcatgga agagcggatg actatttgca atatgtccat
    57241 tgagttcggc tctaagatgg gcattatggc tccagaccag gctacctttg actacctgcg
    57301 aggtcgggag tgtgcaccag cggacttcga tgcggcggtg gcagactgga aggagctcta
    57361 ctcggatgcg gacaccgtct atgacaagca tctagtcctt gatgtgtcag acttggcccc
    57421 catggtcact tgggggacca cacctgctat gggggttagt tttgacgaaa ctttcccagc
    57481 catccgtgac cacaacgacg agcgggccta tgcttacatg gacttggctc ctgggcaaaa
    57541 ggctgcggac attcccgttg gctatgtctt cctaggctcc tgtaccaatg ctcgcctcag
    57601 cgatttgcag ctggcagcta ggattgttaa ggggcggaaa atagcagagc aggttacggc
    57661 tattgtcgta ccaggcagtc gccctgtcaa gcgagctgca gaaaagcttg ggctagacaa
    57721 gatttttatg gaggctggtt ttgagtggcg ggatcccggt tgctccatgt gtctgggcat
    57781 gaatccagat aaggtgcctg caggtgtcca ctgtgcctcc acaagtaatc ggaactttga
    57841 agaccgacag ggctttgggg ccaagaccca cttgtgtagt cctgctatgg ctgccgtagc
    57901 tgcgctttat ggacgatttg ttgacactag acagctagac attctcaagg agggagtcta
    57961 atgcaccaat ttaccacatg gactgggacg accgttccgc tcatgaatga taatattgat
    58021 accgaccagc tcttgcccaa gcagtttctc aagctgattg acaaaaaggg ctttggcaag
    58081 tatttgctct atgcttggcg gtacttggat gataactata cggataatcc tgatttcatt
    58141 ctcaatcagc ctgagtatca aggcgctagt atcctcatat ctggggataa cttcggagca
    58201 ggttcttcta gggaacacgc tgcttgggct ctggcagatt atggcttcaa ggtcatcatt
    58261 gccggctcct tcggggatat tcactataac aatgacttga acaatgggat tctgcccatt
    58321 atccagccca aagaagtcag ggaccaactg gctcagctgg ctccaaatca ggaaatcaca
    58381 gttgacttgg cagaccagtt gatacggacg ccttttgggg aattcccatt tgacatcgaa
    58441 caggactgga aacacaagtt gctcaatggc ttggatgata ttggtattac attacagtac
    58501 caggatttga ttgctgagta tgaggggaat cgtccaagtt actggcaaaa ctaaacatat
    58561 tagaaaataa gcaggtcgct ctgctatgaa tcaaaagaaa agaggaaatg attatgacga
    58621 aacaaattca ctgggatggc gcactttcac aagaaggttt tgacattatc aagggtgagg
    58681 gaggtgtgat tgtttgcccg actaaggttg gttacatcat catgactgcc gacaaggctg
    58741 gcttggagcg taagtttgac gctaaagagc gcaagcgtaa taagccgggc gtggtccttt
    58801 gtggtagcat ggaggagctt cgtgagttgg ctcagttgac tcctgagatt gatgccttct
    58861 accaaaaaca ttgggatgag gacattttgt tgggttgtat cctgccgtgg aaaccagagg
    58921 cttatgctaa attgcaagct tacggcgatg gtcgtgaaga gttgatgacc gacgttcgtg
    58981 ggacttcatg ctttgttatc aagtttggtg tggctggcga gcagattgcc aaggaaatgt
    59041 gggaaaagga aggccgtatg gtctacgctt catctgctaa cccgtcaggt aagggaaatc
    59101 gtggtaaggt agaaggtatc ggtgagcgta tcgcttctaa ggtggatttg attatcgagg
    59161 cggatgacta tgtggcctct atccagccag ataagaccgt tgaaacccgc tatgagcaag
    59221 gggttatggt gtctatggta gacaaagatg gtaaactgat tccagaacaa ggagcagata
    59281 gccgttctat cagcccatgt ccagttgtca tccgtaaggg tctggacatc gataaaatca
    59341 tgatgcacct atctgaccat ttcaactctt gggattacag acaaggggaa tattattaaa
    59401 ataacatgta gaacgatccg aaagggtcgt tttttcgtac ataaaaaact gaccgaaatt
    59461 cagtcagttt ggtgctgttt gataagtgat ttgaggttgt cgactagtct tttctcgtct
    59521 gtcagttcta agatttgcaa ccctttttcc accagttctt gcttattttg ggctatgcct
    59581 agatagacat atgcacgggc tagttggtca tagcgttttt cttgtttagc aagttccatg
    59641 agtttggtgg caaaaaaagt agacttgttg tactgtcttt gttccaagaa aaaatacgaa
    59701 agtgatcgat aatgtgacag tatagtgggt tgaattttct tgtaatcctt gtatttttcc
    59761 aatcgtttaa gaagaagatt ggcagtttct tcaaggctat caagtgaaga aatcttagac
    59821 agaagagtgc cgaccaagat aatatcgtta tgataccagt tgtcatatcg ttctagctct
    59881 gaccacagaa gttttgaaag ggtttcagct tcgtcggaaa gctgggtgat agaagaactt
    59941 tttcggacag ctacaacggt ctccaggagg aggcactttc tgtgaatagg aatatcattg
    60001 ggttcttttt tcaaatggtc ctggcaacgc tttatcaaat cctccatggt cttcgtggtc
    60061 ggatttctga gattatctat atcatagagc agttgttggc gttggctggg ctggtagtag
    60121 ttacagaggt attcaaactc ctcgaaggtc atatcaactt gcttgagcaa gaaccgcatg
    60181 agctcgtagc taggaatggt ttgatttttc tcgaagcgaa ccaaggtcgt ccgattgaga
    60241 taatccccac aaatctgctc ctgactcaaa tgcttgcttt tccgaatgct cttatacaca
    60301 ctgccataat cccaccgcat aatctactcc tttcaaaaaa ctgtgaaaat atgtaacaaa
    60361 ataaacaata gttgtaaaaa tagtatatca taatggtata gaatatacat caatttctat
    60421 cgggtagaaa ggagaaaagg aagaacggaa acgatattct tggtaggagt tgaggtattc
    60481 aagaaaaatc ccatcagaga ggaggacagg gaaggatgaa aaagaaggct gcatatatga
    60541 caatcatcat actggtttta cttatttcga tcattcgcac ttttggtctg ccagaagaag
    60601 atatctacga aacccaaccg gcaactcatc tggtggggta gggagccgta aaagtggcta
    60661 tatgaggatg tcaatattta gtgtaagggt tcgttttgat actatctctg aaacatattt
    60721 taaattgggg tcttctagca aatctactaa gtataaacat atataaggga ggaaacctat
    60781 gttagagatt gatggaatta ttcttagata tggttctaga atcctgttaa atgagacttc
    60841 tttacagttt aagagaggaa acgtatatac gatttcaggc ccttcaggta ttggaaagtc
    60901 gtcattacta aacaaaattg gtctaatagc aactgattta ggagatatga gttattctta
    60961 cgatggtcat ccgcttaact tgactgatgg ggaagcagtt tcaaatttca ttgcccaaca
    61021 tattggattt attttccaag aaaagaattt aataaggcag ttcagtgttt atgataattt
    61081 agcattgtta gtcaagagtc aaagtgaagc tgatgactta gatgacagag tggatgagtg
    61141 tttaaaaaaa ttaggtttat tagataaaaa atacactttc ccttatgatt tatcaggtgg
    61201 cgaggaacaa agagttgcca tcgctagagc tattgttaca gataaagata ttattttagc
    61261 agatgaaccc acaaattcgc ttgacaagga gaatagagag aagattacga atcttttagt
    61321 agaattggca catcattatc agaaaatagt cattattgtt tctcatgatg atgaagtgat
    61381 aaaatacgga gatgttcata ttagattttt agatcaaaga attgaacagg aagaaaaaaa
    61441 tacatttaaa aaagagggag ccagagatat ctacaatctt tcgatcaaac aaaaaattga
    61501 tttaccaaag agaaaattcc ctatttccaa aattgtgaca ggcttactta ttttctttgt
    61561 tgccctgagt agtatgatgt ttaatattac tggtttattt cagtctcact atcagcaatt
    61621 attggataat tctttagaaa atggattttt agtcatgaat gacaacttgg ggattaaggg
    61681 gaaacaagtt tatgatgatt tcttgtcatt tacgactgat gaggtggaat ttttagcgga
    61741 ttcagtggct attttgaatg tcaccccgta cttagaattt ccttatcaag gattgacttt
    61801 tgaaaatcct gaacaatcaa ctcagcaaat caatcctgaa ataactctta atggaaaaac
    61861 gattactttg tcttctccgt acagcataca gccactattt caaacgaata tgaccgagag
    61921 aaatatcgag tatattgata gaactacgaa acaaggattg attgtatctg aaagttttat
    61981 tgcaacgcaa aacttatctt cagagttggg aacttttcca agaataacat tagattatta
    62041 tgtaccagta gctctttatg aaggggaaat gaccactgat acaggggaaa tcctagatag
    62101 tgacggcaac atctacgtta aacagagaag agagttcaaa ataattggga tattaaaaaa
    62161 ttcctaccct ttccaatatt caatttatgg caatagtttc ttcatgatgg ctgatgaaat
    62221 gctacatttg cagcaggaat tacaacagga cgaggaactt ccagaagtat taggagggct
    62281 atcggtctct agttggcaat caagtgccta tcatataaaa ataaaaaata gcacagctgt
    62341 ttctgaggaa atagaccgca ttaaacaact tcctagtgta acaattgttt cctcggcaga
    62401 agattatcag agtctgaaag atatcctagc ttatgtcaga aaagtatcga catatatagg
    62461 tctagtcatc ctgttgctta tggggttatg tttatttttc gtttttttcc aagtgagtaa
    62521 tactcgtaaa gaagaagtag gtatattgaa agcgattggg tttaatagta aggcagtcag
    62581 acgtttttat tatagagagt tggtccaata tgctatatcg gtcggttcaa tggctttatt
    62641 agtatcattt ttattagtgg ttctgctagc tttttcgtta gatttagaca taagggatat
    62701 tgtgagagtt atgattttaa atgtgattac tttacctcta gttagctttg gtgtgattgt
    62761 cacaagtgga ctattaccga tttacaaggc atgtcaaaaa tccccagtag attgtattag
    62821 attgaatagg taggtgtttc taatgaaaaa attttctcta aaagcaattt tgataacttt
    62881 actggttatc tgttttcagg ctcagcctgt ttcagcgggc tatgtaaatg caacacgaca
    62941 tataaatggt cattctctag tggggttaca cgttcttaat gtaactttcc atgcttctgg
    63001 atactctaat cctacatctg ggagtgtaac gaatatgtat tttactgatt gggcatggtt
    63061 tccaaatact atttctgaca gaaaaacttg gacaagttct attccttatg gacagagagc
    63121 taatggttcg gtattaattg gtgtaggagt aaattctcct tggggagctg tcaatctatt
    63181 tggaggtcaa aaatatttat caattgattt ttaagaaaaa ttaattaaat attttatgtg
    63241 ttgtaatatt ggggtaaagt attattaagt ggagagacac tttctttcca ctttttgttg
    63301 ttctggatac ttttatttaa tattattata tcaaataaaa cctgccattt ccccaagaaa
    63361 ggagtttcta tgctaaaagt agttgatgtc tgtaagcgat acggtgccca ccaggtcttg
    63421 tcctacgtgt cctttgagct gcaagcgggg gacttggttg ctctagtggg tcccaatggt
    63481 gtgggaaaat caactctgtt gaatattatc agcaacacag aaacggctga ccgtgggtcg
    63541 gtaaccatca atggtcgtcc taatagtgac cgagcgattt ttcaggatat gtctgtcatg
    63601 ttggatgccc aagcccttta tccacagttg acgggttacg accatctgac ctatgtggct
    63661 gccacccaca agctggggaa aaaggaagtg gatgcgttag tggaagaatt ggggatgggc
    63721 tactatgtca aaaagcgggt ggctggctat tccatgggta tgaagcagaa gctgctcttt
    63781 gccatggctg tccttcccaa gcccaagctc ttgttgctgg atgaacccca tatcggcttg
    63841 gacccgacca atatcattca acagcgggaa tttcttctaa acctacaagc agaaggggtt
    63901 gccattttgc tctcttccca ccatctgtcg gagattgaga aactgactaa tcaggtttat
    63961 ttcctcaagg ccagcaagtt gattgccaca gaagtggagt tgacggctga ttatgattac
    64021 catcttgctg tggaaaactc caagcaggtt caggagtttt tgcgggatta tcctcaactc
    64081 ttgtggaaaa aggcagagca gggtctggtg gaaatcttct tgcctgagcg agatttactg
    64141 gattgtttag attgtattcc aatccagcag gtggcaggcc ttacaaaagc cagcgactat
    64201 atggagtccc tctaccgtga tctctacgtg gaggaaggtg gtgaggggac atgaggctga
    64261 actttgaaat caagaaaatt ctctggtcgc ctctttactg cctgctcgtg ctgggttttc
    64321 taggtctggc ctaccttcct atttctcagc gccaagtcca ccaagcgacc tatgtggaaa
    64381 cctataaaga agaactgagt gaattggcca gtgtcttggt agatataaaa attgaggagg
    64441 gctcagaaga agcaccgcgg atggtgggct tgaaatccga tatagaaagt gtcggtcagg
    64501 ccttagatga gggaaagttt gaagctatcc ccaactaccg caaactcatg tatcaggatt
    64561 tggactattt tatcagtcgc aatcgacagc tttttcaaac tcggaattcc ttgacacaaa
    64621 cggaagtcga acgtttggcc agatggaatg actggctgat tgagtatcaa gtgcctgatg
    64681 gtcctgaaaa caaggcttgg tcaacagggc gtattgttca agcctactta gaaagtttgt
    64741 ttggttttct tcctgtattt ttggtgcttg gatttctact tgccaatcaa ctgtcagaaa
    64801 agacactggc acatcaagtt tggcagttgc ggcaatggga tagtctgagt ttgcagggga
    64861 tcaggcgttt ggttgcttcc ttgctttcgc ttttgttggc tgtggggata ggtttgcttt
    64921 ttatcatggt ctatgatggg ctaacaggtc agttggctgt atctagtttt caagcccctg
    64981 ttgagatttt gggtcagagt cagttgatcg gctcttggct ttacgggctt atcttgcttg
    65041 gtttttggct ggtcttgctt ctagctgttc gcctactttt tggatttttg gaccacttgt
    65101 tagccagtcg gttgactttt gtagtgacgg ggttactatt ggctgtggtt ctttcctatc
    65161 aggctggtgc agttgctggt tggtcaggtc aagtatttcc cttactggcc tttcctagtt
    65221 ttttagacac agctggattt tcacaggtct ttttacaggt ggatgttttc ctcctgctga
    65281 ccattgggct tttctttgct tattatgtgc tgacagaaaa gaaaaggctg gtcttgtcag
    65341 ttggtcatca gaaagaatgg gaaaccggtc ctttggacaa ggattggtct tttgaaatac
    65401 tcatccttag tcggatcaat tcttggaaag ggctcgtctt agtaaacttg ctcctagctc
    65461 tgctattttc cctactgacg ggactagaaa agcaagaggt tgcccaggag gagagggttt
    65521 cgatggagtt ggttgcccag tcctatgagc aggatggggc atatgtggag agtttgcagt
    65581 cggaaatcaa ccgtctgagg cagttggtca aagaggacgc gagctatcag gaggagttgg
    65641 agtggagagt ggagcttctg caggaatacc atatctataa ggacctctat gtcaagcaat
    65701 ggcaggttta tcaggaaaaa cctcaggctc tgccggctag tcaccttgct atgctggagg
    65761 cagagcaggt ctatctatgg gctagagagg agaaggcgtt tgccaatggt gatattgggg
    65821 ccagccagac ggtggataat cttcgccgtt accagacccg caatcaggtc agtcagcatt
    65881 actggaagca actgatggag gctggagtgc cagcaactaa gcggggcaag gatgtcattt
    65941 tgaccagctt ggaaaatcgt tttgacacaa atgatgcctt tgttccggta gacgatccct
    66001 cttgggaccg ttccagagat ttgtcaggta tcggcagcct gcgctctctt tttgatggtc
    66061 cggcctattt ggtggtgcta ttgctggcgg tttggattgg cagtcggggc aaggcggtgg
    66121 aagttgctgg aaaaaactgg cgtctctatc agacccagcc tgtggatttg cgtcaggttc
    66181 tatttaccaa atggttgctg ggactgggcc aggcactagg ttttacagtg ttctttctcg
    66241 ttagcctttt cctagtcaat agcctggtcg gaggaatcgg ttatctggaa gatggactta
    66301 tcttgctttc gcattcggag aggggtattt ttcttgaact attgagaggg caagaactct
    66361 gggcttggtt cctgcccaat gctccttatc tcttgtggat ggtgcttggc ttgcttgttt
    66421 tggaaattgt tctagtcagc ctcaaccatc ttttgcaagt tcgattttca aaccgtttag
    66481 tggtattcat cctactagct ggtttgctgt ctctgctgga ctacctcctc tttcaagatc
    66541 tagtcttgga tgggcaggaa atttttaggc agttagctct gctattttca taaaaaaaga
    66601 aaaactggct gaaaattttt cagtcagttt cttgtgttta ttcaattacc aacatgcctt
    66661 ctttaacggc aaatgggtgt tctgggtcaa tgcggtcgta gaacatgaca ccgttgaggt
    66721 ggtcgatttc gtgttggacc acgatggcat taaagccttt gagtttgaca cggtgttttt
    66781 cgccgttttt gtccatgtaa tcaacagtca cacgcgcgtg gcggactacg tagccttgga
    66841 cttcgcggtc aacagatagg caaccctcgc ccccttccaa agccgattct tggacagaat
    66901 gtgccacgat tttagggttg tacatgactt cttgaaggga gtaggcttgg gcaggtggat
    66961 tgccttcctc atcttctgga tttgggacta agacagcaat gatgcgtttg gaaacgtcaa
    67021 tctgaggtgc tgctagacca actccgccac ggagtttcat tttttcagcc atgacaggat
    67081 cctgcgaatg tttgaggaat tgcatcattt tttcgcctaa aataatttcc tgatcagata
    67141 gaggaaatgc aacttcttca gcgacctggc gtagggttgg atgtccttca cggatgatgt
    67201 catccatgtc aatcaaatgg gcagcttttg tcaatcgttc aataacagac atgattctct
    67261 cctttgaata tagttaagat aagtatagca tgaaatctag gagaataaaa gtctcagtca
    67321 cctatctatt ctgtctcaaa tctgctatac tagtaaaaga cgaacgttga aagggagaaa
    67381 aatgaaaaga attttagaaa aagccagttt gctggcccta tccaccatgc tggtttcgac
    67441 atttgcagtc tcgccagcta ttccacagat gattgagcat tttgcccagc agggaattgc
    67501 agcggcccag gtggaaaact taattacggt gacctccttt gctattatgg ttactctatt
    67561 ggcaaatggt ctagttgtcc gtttcttgtc tgaacgaaac attatcattg cagggctttt
    67621 gcttatggcc atcggcggag ctttgcccat gtttctaact gcttatcctc tgattttatt
    67681 ggctcgtatc ttgcttggtt tagggattgg cctaatcaat gcgcgtgcta ttaatatcat
    67741 cggtaatttt ttcactggtc aggagcgggt gcagatgatg ggcttgcgtg gttcagcaga
    67801 ggttttggga agtgcagggc ttaccctcct tgtcggttgg ttgacccagt ttggttggca
    67861 acctgccttc ttggtctacc tttttgcctt ggtcatcttg gctctcttcc ttctctttgt
    67921 gcccaaggag gaattgctgg ctcgcatgga ggtaaaggtt gaggagaacg cgccaaaggt
    67981 caaactggac aagaccatgt ggatgatggg gatttaccta gcctttctag ccttctttgt
    68041 tatcaatgtc aataccttcc tgaccattcg tattcctcag attgttttag ccaagggcat
    68101 cggtactgct cagcaagcca gtctcattct cagtcttatg caggtcatgg ggattgtggc
    68161 agggacggtc tttagtagcc tggttggtcg tttgaagggt tggcttttag ctgtttccta
    68221 cgtggtcttt ggactcgcgg ttgtcggcat tgcctttgcg gataatctct gggtgctggg
    68281 actcggtggc atggtgtcag gatttttcta cagcatcatt ctaaccattg tctttagtca
    68341 ggtaacagac cgtgcaccca aggccttgct caatgcggtc atgaccatcg tccttatggg
    68401 ctgcaatatc ggcggtgcga catctgccat cttgccgact tatctggaaa aactcaaccc
    68461 gactccaaca ggtgcctttg gtatttacgc catcggctgt gccttgataa gcgcaggctt
    68521 gatttataaa caactgaaga agtaggagtg agaaagaact cgactggtct aaaaagagtt
    68581 cgtcaacact tttttgtttt aagttgttga gctgaaacag tctattccca gacatcaatt
    68641 tatgtgagct gactgccgtc agcttatatc tcccacttta aaaggtctcc cagacctttt
    68701 aaactcccac ccccgtatag ctccaacagt cagagtagtg actgttggag gttggagatg
    68761 aagcgaactc tgttcgcttc agtcgtatag gtcagatttg gagtgtaata cacgaattgc
    68821 tgagatttgc tttgcaaatc ttatctccca cctttaacct cgctttttcc tttctaggct
    68881 cgggctgaaa cagttcactg aactgtttca ctccactgga ctgttttgat acaaacttcg
    68941 tttgttatat ttcctacctc aaacaatctc ccagattgtt tgagaaatca accactgcgc
    69001 tgagatgttg acacgaactc taagtagtag ccgctgggct tgagcccagc ctcttttggt
    69061 ataatattct tatgttagaa aataaccgct tgaatgaatt gctcttgcgc tttcccgagg
    69121 atgttcagtt gattttcaaa gacatgattt cctcctatca gttgggctat gtggattatg
    69181 tctatcagac agatcattac gccactcaaa accgtcggat taaaaatttg gcaaaaaatt
    69241 ttcggcggat ggattacttt tacatcatgc ccctgccaca agatttagca ttggacattg
    69301 ctaaccaatg gtgctatcaa ccgcctttgg atgcctatac gattagtgca aaccccgata
    69361 cttatgctga gatgatttca ccagaggcgc gtggggatcg cttttttgca gtcatccgca
    69421 atgccgccct catgggctat ttctgtattg accaagatgg cgagaccgtt gacattcgtt
    69481 tgggcatgaa accttctttg acaggtcagg gaaatggcag agctttctac cagactattg
    69541 aagactattt agtagagcat gttcagccag ctagtatcaa actgacattt gcttcttctc
    69601 atcaagttgc ccaaaaactc tttcatgctc ttggatttgc agaaagagaa aagcaagcag
    69661 aatatatcaa aatggaaaag aaactcgtat gcgattagat aaatttttag tggactgcgg
    69721 tgtcggtagt cggacagaag tcaagaaact cctgaaaagc aagcaagtca cagtcaacgg
    69781 ccaagttgaa acatcaccca agcaacagat tgacgaaaag tcagatcaga ttgcactggc
    69841 aggtcaggtc ttgagtcatg aaacctttgt ttactatctg ttaaacaagc ccaagggagt
    69901 tatttcagca accgaggatg accgccatcg gactgtcttg gacttgctag acgatacagc
    69961 tcgccagaag gaagtttttc ctgttggacg cttggacatc gatacccatg gcttgctcct
    70021 tttgaccaac aatggccagc tagctcatgc catgctttct ccgaaaaaac atgtggacaa
    70081 acgctaccga gcacaggttg acgggatcat gactcaagag gatgtcgaac gatttgcggc
    70141 aggaattgag ctgaaagact ttacttgtca accagcccag ttgaccatcc tctctacaga
    70201 tgaagctaag cagacctcgc tcgttgacat caccatccga gaagggaaat ttcaccaggt
    70261 caaacgcatg gtgcaggcct gtggaaagac ggtgacagac ttgcaacgat tgaccatggg
    70321 gcctcttagc ttagatccaa aattagctct tggagaatac cgcaggttga cagaaacaga
    70381 attgactagt ttggaagttt ttggggtgga actatgaaaa atatgttcaa atgcctgcgt
    70441 gccctccctt taattctagt agcaggtgca gttgtttatc tctcgatttg gatgtggatt
    70501 gataatgggg attggactta catcattgcc agattgtctg gtatgacgga gaagcatgct
    70561 aacaatctat ctctaatcgc catcgccatt cagtccctct tttttacgtc cgattggttt
    70621 tatagccgca ttcgtgcctt tctcaatcgt cggttggaaa aagccagagg gctcaatcgg
    70681 caaatttatt tgggctacaa ggctggagtt gaacttctga tggctctacc caaacggacc
    70741 atcttgttta gcatttattt aatcttgacc attttggaaa acttaggtgt gattgatagt
    70801 gctaaagatt atgcagtggt cattgtgttt attattgccg tggaccgtgt gactaaaata
    70861 tggccagaag aaaagcggag gatgattgag tttagccaga agattaagaa acggattaag
    70921 agtgtgggat aagtcaagat taaatatttt gggagtggga aagaactcga ctggtc
//
LOCUS       DASFQS010000003        69859 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.003, whole genome shotgun sequence.
ACCESSION   DASFQS010000003 DASFQS010000000
VERSION     DASFQS010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 69859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 69859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..69859
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.003"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..12428)
                     /locus_tag="U1041_000135"
     CDS             complement(<1..12428)
                     /locus_tag="U1041_000135"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013622.1,HMM:NF019192.1,HMM:NF020018.1,
                     HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GA module-containing protein"
                     /protein_id="HEM4767280.1"
                     /translation="MNLFKIKRNKLNRQEAFNFEKRSQFGIRKLTIGVVSLVIGSGMV
                     LSGVEQVQAGTDYDPGVEIRYVRNGSPKALASDGDFKIEKSFVEVNGVQYVDVTLTFN
                     QDHDGYARRFLYFNMPKSLYEPEKITRELYWQGERTPRETTEYRTWQGDYRFADEPWY
                     RLWDHRYIIGSPDSLQGERHKKVTSPTDPGGDTIGGQSEGRWNGDWDRLMFSVPNNAG
                     SGKEALTKAASDFKATSRTVYINRFSGSTDKHVYKFRARVKDGNAPMNFVVGLNEESG
                     SHANFLAQYGTTPDTRTLAEKSTINPPARIGVNSLQDLSQQTRNNIAQKIREANPDLF
                     NGAGPLVTNVTVSSDGIGGNAVLRFKDGSEKTIPMKQLVYKINTASGAAPTAPSTSTN
                     FVLKGRGVVGNEMVGLQGEDHQLNLPAKKAVANIATIGNKATYLTQWQEQLNKFLELN
                     KQLQSWNNQWGFKNGARTFGPDNWKAQHLTASIKYTDSRQTQIQGIEVRGVTKDSRFG
                     GTVNTQVYGLLTPAMLFYQEDPLKTTKDEAKATIDSIGNINGKAADWKSRIDAAQNQQ
                     AIEAIITEARNEKNALDKKKAAAIQEINALPHLSQNEKTAAINAINSATTTTVVDQKL
                     NDAKALNTTNMRNKGKEAINALSKLNDGEKTPYRNRIDNATTQDQINAIIEEAAFEDL
                     KRSALEQLDNMNPAPSNKDELRAQITETNFNTVSSDGKKPAERIEAILERAKAEVLRD
                     QARRDINAISGLPEEKKNEFLGIVDRAQTPSEITNAVDQARAYSDYIQAKDAINQLTN
                     INNKQKEELLAGLERDKSQQGVADMLTSARALDGEMKHLKDLVAQAETIKRSSDYSNA
                     NSTQKGAFDTALDAAKKVTPQGGELPTVSVTQLISDLTSAITGLNGSTRPITKEVDKT
                     NLKAEIDRSTQVKDPANAEYTYASDDKKRAYEAALTKAREVYDKTNPAATQDEVDEAL
                     NKLQTARIALDGHAPDRDTTPPVLGGDRMEIYSDVAAHAISTVGRKVPRPNQPTPVEE
                     YGENSTRLNELIVTDQESGINIDSVTFDEATQRHLQLLGLKFVKYDRQQDNGAVGYFT
                     TIEENGVVNFTGTGIAKFYFTVANTHGVVSPRLEYRYILKDDIAPTATPTEHVLIRGQ
                     EATITIPIQDNSMFGTEGGVSTGTMSIRPENNTSDPLTPAILNFTNGNTPQAFTISIP
                     DSSPEFVFENHNYGKRSRTGTVSLTANPSQTLERTTYKFRVADGNTPRGTSEKVTFTD
                     ITFTVVDRLAAPEESAKVSVNNPSRLTEDEKNAIKQAVRTANPHIAEIDNAANGDTNK
                     QVRIDVAENGRVTVTYPHGGKTDTLTAQQVSKTNPAPTFGDFGVNTTVGSSTHKTIFV
                     FGAKTENNAVVEDAPTFDTTKASGGIPVQDNTGIASVELIGLDSEAKSTDTGIAFTAE
                     GKLVADFNKSIQSNLVRNGYNSRWHHRIKATDNGNPAKSTITETIRIQAYRVEKTDNN
                     AIAKEFGTALSQDELTGKLGVLVSTGMTVPADNYSHKVAGYTQENGQYTTITNISELP
                     TSGNYTVRLETTNIYGQTIVNDIPVDYTEQKDVITPVAPTAQTLIDGASPTSDADKTA
                     LINALKEANKTPEGTSKFPENTRFDVAENGAVTITYPDNSSETVTVPFKQKDSAQHTP
                     VVAETPINSAATAGTELTEDERNAVKAAVTVPNFPAGDRQPTVTVPADARVTDGTNGN
                     TGKPVVVATVEYPDGSRENVEVPVRQRDTLADSTELVVPEAVQIKGTTVAEDEKQTII
                     DALKAANPGKLPEDTRYDVAPNGAVTVTYNDTSSEDVNVPLKSGIPTVTTQPHDLVVF
                     KNTDMTTPVELAGFADNESISDVQIVSTNGSTKDEMGLTVGEKDKENNTKAALISGKT
                     GTSYGVGKHTRKLRALDNLGQASAATNDFYVRVVDATVNQPETAIEKAFGQSLTPEDV
                     RPKINFNVGSGQDNMIDFEVIIPADAPTSGQNKDISVIIRTKAHANAPENFKQTFVSQ
                     DKTVTVRATWPTQAAHIEVVPPAETDPVLIDSARPTTETDKNTLINALKEANKTPEGT
                     SRFPENTDFSVAEDGRVTITYPDRSSETVTVPFKQKDSAQHTPVVTETPINSAATAGT
                     GLTEEERNAVKVAVTVPTYSGSGQPTVTVPADARVTDGTNGNTGKPVVVATVEYPDGS
                     RENVEVPVRQRDTAKYEASVTNPEAPAAIKASHETGTQITEQDDKNVILAKVSVPTGS
                     NGTPSLDQNPVVEERDGKQVVKVTVTYPDQTTDTVYVPVDQKDNETHNPTAPAESVKL
                     DAPATANSTLSDADKQAVKNAVTVPANSGGEVSLAPDAKVELVNGNPVVKATVTYPDG
                     TTDIVEVPVVQKDSTKYDATAKETPVPLDSPVTPGQTLSAEEREALKFGVNVPAGSNG
                     QIHVPEKAAVKLVGDKPVVEAEVRYPDGTVDKVQVPVRQYDRAVYTPNLVNPKEVPIS
                     VEPTNDTQITSPDDATILANVDVPAATPDGTKPEVTKTIASPVKDGTGTNQGKKVVEV
                     EITYPDKSKEKIEVPVKHADNQVHNPEAPTKPVQLDVAATTDTSLSDADKQAVKDAVT
                     IPQGSGGVASLPEDAKVVDRNGTPVVPVTVTYPDGTTETVDVPVVQKDSVKYTPSLTD
                     ANSPVLTNTPAKANEPVQETDKAAIAAKVDKTNLPQDTEVKVPDNAVVEIVDGKPVVP
                     VEINYPDGTSETIKVPIDQKDDLTYTPVAPSKDKPVAITASQTLGTQITDPADTKAIL
                     DSVTVPAVDGKEAGEVDKEIVSAVQDSPDGPYVTVKVTYPDGTSETVQVPVNQKDNET
                     YNPTTPTAPVQVDAPAEENAALSDADKQAIKSAVQIPDGSNGVASLPEDAKVELVDGK
                     PVVPVTVTYPDNTTDTVYVPVVQKDSVKHTPSLTDADQPVLTDTPAKAETPVQDTDKA
                     AIAAKVDLSKLPENTTAKVPDGAKVELDGDKPVVPVLVSYPDGTSEIIKVPVDQKDSE
                     TYTPTAPAAEAPVAITGSDAPDAPIAEADKPAILNSVTVPAVDGGQAPKVTKEITSPV
                     KVVDGKAFVEVTVTYPDKTSEVIPVPVNQKDNEANTPTVTAPEKPAPISVPVAENTPV
                     ETDADKKLITDKVNVAGLPNPPQSVKVAEPAKVVLDQAGNPVVNVEVTYPDGTKDIVP
                     VPVKQADNQTNTPSLKDPEVGKPAEVLVAIDPTPGVAINNPMDKEAIAAKVDLSKLPA
                     GTTAEVADGAVVANDPLTNKPVVPVTVTYPDGTSETINVPVKQADNLAMDPSLKDTNP
                     VPILTEATVGLTVSDKANLDAIVAKVDPKTGKAEVVNNTIVAGKEDGPHAGQPVVNVL
                     VTYPDGTQDTIEVPVKQADNVANEPSLTDQTPVPIQAAATTGTPVPADDKPAILAKVK
                     VPEGANATIADDATVVREDGQPVVPVTVTYPDGTTDTISVPVKRADNSKYTPSQVTDP
                     VQVDAATAPGTAITSQDDKDAIIAAVPVPKVAAGEKAPVVSLPENPRVEEVNGQPVVK
                     AIVTYADGTTDTVDVPIVQKVSATKEPSLKEAEAGKPAQAIITENPTAGASITDPADQ
                     NVILDKVVVPEGGKASIADDAVVEMDGDQPVLPVTVTYTDGSKDIIKVPVKQADNVAK
                     EPSLKSQTPVGVMDAPAVGAQVEEPADLEAIKNNVDTKGGTASIEDPTIVEGPNNQPA
                     VAVKVTYPDGTADTILVPIKTADNVTYTPVLKSTDPVLVSVATDNGTAVPEADQAKIL
                     ANVDVPALTADGDKPAVDLSIENPVVLQKNGQAGVEVTVTYQDGSKDKIFVPVDTDTD
                     KDGFSNKEEEKAGTSATDPASTPAGQDSAERLNPGLTEPVEVKNPDKLTDAEKEAVKK
                     AVEDSNDLPAGTTVSVANDGTVTVTYPDNSTDTIKPKDAVTQFVDTDGDGISDRQETE
                     NGTDPSKVDSDNDGFSDKEEVERGTDPTKADSKPASSETDTDGDGISNEDEVARGTDP
                     NKSDTDGDGFSDQEEITAGSNPTKADSTPANVDKDGDGFTDTEEAAAGTDANNPASTP
                     AGQDSADRLNPGLTEPVEVKNPDKLTDAEKESVKKAVEDSNDLPEGTEVSVSDNGTVT
                     VTYPDKSTDTIQPAETVKVAKDTDKDGFTDTEEEKAGT"
     gene            complement(12968..13657)
                     /gene="rplA"
                     /locus_tag="U1041_000136"
     CDS             complement(12968..13657)
                     /gene="rplA"
                     /locus_tag="U1041_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEM4767281.1"
                     /translation="MAKKSKNLRAALEKIDSTKLYSVEEAVALAKETNFAKFDASVEV
                     AYNLNIDVRKADQQIRGAMVLPNGTGKTSRVLVFARGAKAEEAKVAGADFVGEDDLVA
                     KINGGWLDFDVVIATPDMMAVVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGK
                     ITYRADKAGIVQALIGKVSFDADKLVENFKAFHDVMAKAKPATAKGTYMTSVSITTTQ
                     GVGIKVDPNSL"
     gene            complement(13698..14123)
                     /gene="rplK"
                     /locus_tag="U1041_000137"
     CDS             complement(13698..14123)
                     /gene="rplK"
                     /locus_tag="U1041_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004226069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEM4767282.1"
                     /translation="MAKKVEKLVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNA
                     RTADQAGMIIPVVISVYEDKSFTFITKTPPAAVLLKKAAGVEKGSGTPNKTKVATVTR
                     AQVQEIAETKMPDLNAASLEAAMRMIEGTARSMGFTVTD"
     gene            14278..14646
                     /locus_tag="U1041_000138"
     CDS             14278..14646
                     /locus_tag="U1041_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3397 domain-containing protein"
                     /protein_id="HEM4767283.1"
                     /translation="MFESIIFLKIVAFLFIFLTLAISIIAVKFFRLQNRGWNFADIAF
                     PLYAIEFYLISDKAYYNSLLPQLVLALSLLAIGLCGFFLFRKKEFSYKRFFKVFWRAS
                     FILTFFMYLALVIAVLTLKS"
     gene            complement(14687..15073)
                     /locus_tag="U1041_000139"
     CDS             complement(14687..15073)
                     /locus_tag="U1041_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002931159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4767284.1"
                     /translation="MKFDAVHHIAIIGSDYDKTREFYVEKLGFEQVDEHIRPEKNDIL
                     FNVKKGNLVLEIFIKPDAPMRPTMPNPEHTGLRHLAFQVADVEACLEEFDRLDIRHEA
                     LRTDDFDGKKMAFFFDPDGLPLEIHE"
     gene            complement(15073..17436)
                     /locus_tag="U1041_000140"
     CDS             complement(15073..17436)
                     /locus_tag="U1041_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEM4767285.1"
                     /translation="MRKTSKKGKATRRPTKAELAQQERVKNITFRVLGLLFIAFAASR
                     LGVFGVTSYNIFRLLFGSLAYLLLAGAFIYLLIPKVLREREGAISGFWLIVIGLLIEF
                     QAYLDWTYQGSDLFGHTLKLALSDLAKFQVTAFLGGGMIGSIFYLPVSFLFANVGSFF
                     IGLLVIVFGIFFVSPWSVYDVADGLAVAKDKLVETQVKRAELRTQKKAEREEKRQQEL
                     ARLEEERLRLEEESARALALVDRHVDLETGEILEEETVQVPIISEYDHLDIEDEFPIM
                     LAEDDQPAQSNSASQASEPNEFEKDETDVEIDFKPKQRLAYKLPSIDLFAPIKAKSQS
                     NEKRIVRQNIKVLEDTFASFGIKVVVERAEIGPSVTKYEVKPAVGVRVNRISNLADDL
                     ALALAAKDVRIEAPIPGKSLVGIEVPNSEVATVPFRELWEQSKTDPDKLLEIPLGKAV
                     NGSVRSFNLARMPHLLVAGSTGSGKSVAVNGIISSILMKAGPDQVKFMMIDPKMVELS
                     VYNDIPHLLIPVVTNPRKAARALQKVVDEMEKRYELFSQIGVRNLEGYNAKVEEFNSR
                     SEEKQIPLPLIVVIVDELADLMMVASKEVEDAIIRLGQKARAAGIHMILATQRPSVDV
                     ISGLIKANVPSRIAFAVSSGTDSRTILDENGAEKLLGRGDMLFKPIDENHPVRLQGSF
                     ISDDDVEAIVGFIKDQADADYDESFDPGEVAEGDGDAGFGDAGGDPLFNEARALVVET
                     QKASASMIQRRLSVGFNRATRLMEELEAAGVIGPAEGTKPRKVLETQ"
     gene            complement(17563..18921)
                     /locus_tag="U1041_000141"
     CDS             complement(17563..18921)
                     /locus_tag="U1041_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HEM4767286.1"
                     /translation="MKTVVEANQFIQTEKGKVNPVFKPKAHLTPETGWINDPNGFIYF
                     RGEYHLFYQFNPYESVWGPMHWGHAKSKDLVNWEQLPVALAPDKAYDKDGCFSGSAIV
                     KDDVLWLMYTGHIINEDGTVSQVQNMAFSTDGIHFEKIEQNPVATAEGLPEEVIANDF
                     RDPKIFEKDGHYYSVVATKHKDNVGCIVLLSSPNLTDWKFESIFLKGEANQGFVWECP
                     DYFEVDGQEYLIISPMRYQKDGNDFININSNIFVTGHVDWDKKVFVADSFKEIDHGHD
                     FYAAQTTEGPEGERIMVAWMHTWGRKLVTNDLGHKWYGQMTLPRILKKTENGLHQVLP
                     TSVLEAFKDIEIGQSIQGPSKLSLRLEDSLELKLGSDQDYLQFGYDKESQEVYIDRSH
                     LKIQQAGEEEWSTVRRAVTVEAKELLVLIDTNCLEIFINDGQETLTSTFYVEGQIILN
                     AL"
     gene            complement(18940..20550)
                     /locus_tag="U1041_000142"
     CDS             complement(18940..20550)
                     /locus_tag="U1041_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4767287.1"
                     /translation="MKHKFGKTVVTLLASTVLLAACGSKNTASSPDYELKDVQFPLEK
                     SVTLKFMTASSPLAPADPNEKLIFKRLEEETGVHIDWTNYQSDFGEKRNLDIASGDLP
                     DAIHNDGASDVELMNWAKQGVIVPVEDLIDEHMPNLKKILDENPEYRSMITAPDGHIY
                     SFPWIEELGEDKESIHTVNDIAWINKEWLNKLGLEMPKTTDDLIKVLEAFKTQDPNGN
                     GKADEIPMGFINGGGNEDFKILFGAFGVGDNDDHLVVSNDGTVDFTADNEDYKEGVEF
                     MRTLQEKGLLDPEAFEQDWNTYIAKGSENLYGVYFTWDKANVTGMNDTYDILPVLAGP
                     DGTKHITRTNGMGFQRDRMVITSANKNLELTAKWIDAQYKPIQSVQNNWGTYGDETQQ
                     NIFELDKVTNSLKHLPLNGTAPGELRQKTEVGGPLAILDEYYGTVTTMPDDAKWRLDL
                     MHATYLDYVTNDDIYPRVFMEEEDLDKIAQVEADMNDFIYRKRAEWIVNGGIEEEWDS
                     YLKELESYGLSDWLAIKQKYYDQYKANQ"
     gene            complement(20695..21582)
                     /locus_tag="U1041_000143"
     CDS             complement(20695..21582)
                     /locus_tag="U1041_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4767288.1"
                     /translation="MNTQMYTKFDKRMLIVNKILLAFLVLITVVPMVYILVASFMDPQ
                     ALVSKGISFDPKDWTVEGYQRVFSDKSILRGFFNSLFYSFSFAFVTVAISVMTAYPLS
                     KKDLVGKKWINAFLVFTMFFGGGLVPTYLLVKDLGMLNTVWAIIIPGAVNVWNIILAR
                     TYFQGLPDELVEAAVMDGANEFQIFWKIMIPLAKPIMFVLFLYAFVGQWNSYFDAMIY
                     IKDPDLEPLQLVLRKILIQSEPAKDMIGAQAAMNEMKRIAEMIKYATIVISSLPLIVM
                     YPFFQKYFDKGIMAGSLKG"
     gene            complement(21592..22512)
                     /locus_tag="U1041_000144"
     CDS             complement(21592..22512)
                     /locus_tag="U1041_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4767289.1"
                     /translation="MKTSKLQQAGLLDRIKQQKLLLLMLLPGLVLTFIFRYIPMYGVL
                     IAFKDYNPLKGVLGSEWIGFEEFTKFLSSPNFATLLANTLKLSVYGLLLGFLPPIILA
                     IMLNQLLSDKAKKRIQLVLYAPNFISVVVIVGMIFLFFSVGGPVNSILGMFGIEANFL
                     TDPDFFRPLYILSGIWQGMGWASTLYTATLVNVDPALIEAAKLDGANIFQRIWHIDLP
                     ALKPVMVIQFILAAGGIMNVGYEKAFLMQTSLNLTSSEIISTYVYKIGLVSGDYSYST
                     AVGLFNALINIILLIAVNKIVQRVNDGQGL"
     gene            complement(22670..23656)
                     /locus_tag="U1041_000145"
     CDS             complement(22670..23656)
                     /locus_tag="U1041_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4767290.1"
                     /translation="MEEQKSITMKDVARVAGVSVGTVSRVINNEPGIKESTLEKVNAA
                     IKELNYIPDVYARGMKKNKTETIALIIPTVWHPFFGEFAYHVEVELSKKNYKLLLCNI
                     SGPKRELDYLTMLQQNKVDGIIAITYSPIDDYLSSNIPFVSIDRVYENKDIACVSSDN
                     RAGAELAANTLIAKGGRHFAFIGGHNKTINETKKRRLYFEKRILEAGFLCHVLDLEEP
                     YDDFVGQVEEFLINNPQVDAIFTINDFTALDTLAVLEKLGRRVPEDVQVIGYDGIQLA
                     SEKSLALSTIRQPLERMAQEAVACLIDIIDRKGQPQQITLPISYVEGKTTKN"
     gene            complement(23813..24358)
                     /locus_tag="U1041_000146"
     CDS             complement(23813..24358)
                     /locus_tag="U1041_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767291.1"
                     /translation="MSLQNRVEEMYKDHEVKPYISPERDLATWLLEAKPVPKRNMVRL
                     EEGILPGDIILLWRISLGSFETTTPYSKYFEYMYGINGPAHMEQLIADGYAYVETAFD
                     SLDHITSTAKKNILKAEGVTGLSKMKAADLDTALKDNLTEEKLAPYFTVRGYALTEKG
                     RAALDNHPEVLAKHPMKKMYK"
     gene            complement(24359..24736)
                     /locus_tag="U1041_000147"
     CDS             complement(24359..24736)
                     /locus_tag="U1041_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4767292.1"
                     /translation="MIQSIGQVMLYVNDIEASAQFWKEKMGFECVEKQVQGPQTSYII
                     APKSDSEVQFVLHDKAEVAEMEPELNLGTPSILMTSVDVAKTYEELVERGVTTNPVMD
                     LGFMKVVSFADNDGNYYAIREVK"
     gene            complement(24821..25174)
                     /locus_tag="U1041_000148"
     CDS             complement(24821..25174)
                     /locus_tag="U1041_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HEM4767293.1"
                     /translation="MFENLFAPDGSLVWHTVLFYSFSAIILATVCFHIIKNFMEWHHN
                     NRAPKESCKAKLVSKRTHVFGNEVARTNYYVTFEWEGKRQEFRLRSDEYALLAEGDVG
                     TLHFQGTRFLGFERL"
     gene            25317..26120
                     /locus_tag="U1041_000149"
     CDS             25317..26120
                     /locus_tag="U1041_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEM4767294.1"
                     /translation="MKKILALALASSILLTACTNNSTANSSSSTASSSSSSSTTTADT
                     TASSQYAKDLAYAINNPKATFPQLSNEIGENEAAVKIKTTEGDITIKLFPEQAPLTVE
                     NFLTHAKEGYYNGTIFHRVIKDFMIQGGDPLGNGTGGESIWAGKDTTIDAGNGFKDEI
                     SAFLYNIRGSLSMANAGAGTNGSQFFINQNTTDMSSQLSSSSYPGKIIDAYKNGGNPN
                     LDGKHTVFGQVIEGMDIVDKIASVETDTSDKPKTDVKIESIEIIKDYTN"
     gene            complement(26175..26720)
                     /locus_tag="U1041_000150"
     CDS             complement(26175..26720)
                     /locus_tag="U1041_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4767295.1"
                     /translation="MKQNQLRQLTEISLFAALICVVVFFIRIPFGSQFVHLGNALVVV
                     GVLIFGAKKGAAAASLGLGIFDLLSGYASVAWITILESLIVCFILHLFYEKFLKENDR
                     LTNIILVGIVAAITKIILNLLKYTLTGSFVGGLTFSASFLAALGRILGTYGTAITTII
                     AVPILYQVFKGLYNGKQGKQL"
     gene            complement(26717..27565)
                     /locus_tag="U1041_000151"
     CDS             complement(26717..27565)
                     /locus_tag="U1041_000151"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine kinase"
                     /protein_id="HEM4767296.1"
                     /translation="MVQRLLLANDLPGVGKVALATSIPIAAACQVETILLPTVLLSSH
                     TGGFPDVVVEDMTDLNRAYFEQWKNLNLELAGILSGYCRNPQQLSQLAMYAKQTETPL
                     IVDPVMGDGGKLYTGFTPTYVEAMKELIQSAKLILPNVTEAAFLTGRDYLGACYDRAA
                     IEDLLEALAEQVSADIVLTGISFDDSQIGVAYFQQETGEITTYMSKKYPANFFGTGDI
                     LSTLLAVATIEQINLHQAIPLALDFIDKSLERTLALDRDLKFGISFEPFLAELQQAFQ
                     TLKEKL"
     gene            complement(27762..28451)
                     /locus_tag="U1041_000152"
     CDS             complement(27762..28451)
                     /locus_tag="U1041_000152"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEM4767297.1"
                     /translation="MKFGIIAAMPQELKILVEHLQDATETDVLGRTYYQGRIGQHEVV
                     LVQSGIGKVMSAMSVAVLADRFSVDVIVNTGSAGAVAEGIAIGDVVVANQLAYHDVDV
                     TAFGYAYGQMAGQELYYPADQVLLEQLRTVLAEQEMISHVGLIVTGDSFIAGQERIAT
                     IKTHFPEVLAVEMEGAAIAQAAVNTGKPFLVIRAMSDTAQGDANITFDEFIIQAGERS
                     AQTLIAFLEKN"
     gene            complement(28460..28780)
                     /locus_tag="U1041_000153"
     CDS             complement(28460..28780)
                     /locus_tag="U1041_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767298.1"
                     /translation="MGKPLLTDEILEKVKKKQYSDQSSQFGHYRPNQDISMDDALFDP
                     YLEEDYQGYEEGQTIRIPVKPTVVKSRRIETIKREAFRSKVNKILFWVIILLIMFIIA
                     VLFI"
     gene            complement(28791..29336)
                     /locus_tag="U1041_000154"
     CDS             complement(28791..29336)
                     /locus_tag="U1041_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM4767299.1"
                     /translation="MNFEEKTIERTEIFKGHIFDVVVDDVALPNGGTGKRELIFHKGA
                     VCVLAVTPEGKMILVKQYRKAIERTIYEIPAGKLELGEEDTLEDAALRELEEETGYTS
                     DKLTLLADFYSAIGFCNERIRLYLADNLIKVENPRPMDEDEVIELHEVTLEEALNLVA
                     TGDICDAKTIMAIQYLQLMRK"
     gene            complement(29345..30727)
                     /gene="glmU"
                     /locus_tag="U1041_000155"
     CDS             complement(29345..30727)
                     /gene="glmU"
                     /locus_tag="U1041_000155"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEM4767300.1"
                     /translation="MSNNYAIILAAGKGTRMKSDLPKVLHKVAGITMLEHVKRAVDAM
                     EPAKTVTIVGHKAELVQAVLKGQSEFALQSEQLGTGHAVMMAEPALAGLEGQTLVIAG
                     DTPLITGESLKNLINFHVSHKNVATILTAQTDNPFGYGRIIRNADGEVQKIVEQKDAN
                     DFEKQVKEINTGTYLFDNKRLFEALKDINTDNAQGEYYLTDVISIFRQAGEKVGAYVL
                     RDFDESLGVNDRVALATAEAVMRKRINEKHMVNGVTFINPEATYIDIDVEIGAEAVIE
                     ANVVLKGQTVIGERTVLTNGTRVRDAKIAADVVISNSDIEESVIEEGVTVGPYAHIRP
                     GSLLKKDVHVGNFVEIKASTLGQGTKSGHLTYLGNATIGNNVNVGAGTITVNYDGKNK
                     FKTTVGDNAFVGSNSTIIAPVTIGDNALLAAGSVITKDIPEDAIGIGRGRQENKEGYA
                     TRFPFHPSQK"
     gene            complement(30838..31152)
                     /locus_tag="U1041_000156"
     CDS             complement(30838..31152)
                     /locus_tag="U1041_000156"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767301.1"
                     /translation="MDKKRVIELLDQLSPILAGKEEEIGKEKTGKLQSALLVTKEDVA
                     SKDGVALATILSGFVQAVSNASLPGSNLRFTDQERPVWEEFKALTEQAREDGKRGLHL
                     IF"
     gene            complement(31219..31692)
                     /locus_tag="U1041_000157"
     CDS             complement(31219..31692)
                     /locus_tag="U1041_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HEM4767302.1"
                     /translation="MTPTQLWQDFLAVNPLAGPEPEAWAFGAEADRLVDLVARGIKTS
                     TSSAHALYAVEGEEIPKAGGYDIILDGQGQAVCIIQTTKVYVIPFFQVTEEHAYKEGE
                     FRQEGDLSVIKEKSLAHWRQVHEELFTIWLAEAGLSFSEDMLVVCEEFELVYPKM"
     gene            complement(31689..31970)
                     /locus_tag="U1041_000158"
     CDS             complement(31689..31970)
                     /locus_tag="U1041_000158"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767303.1"
                     /translation="MLIFDDNPHVAVVICKHISEENKPITYISHDLEDGMWQFLCGDI
                     HDIADAQLIALVEILQFGITETLLNQIPYGFEALLDQAKNWQISRKDPL"
     gene            complement(31982..32680)
                     /locus_tag="U1041_000159"
     CDS             complement(31982..32680)
                     /locus_tag="U1041_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006151199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase"
                     /protein_id="HEM4767304.1"
                     /translation="MTKTALITGVSSGIGLAQAGIFLENGWRVYGIDQASKPDLAGDF
                     HFLQLDLTGDLSPVFSWCQTVDVLCNTAGILDDYRPHLDIEEDELARIFTVNFFAVTR
                     LTRPYLQQMVDRQSGIIINMCSIASSLAGGGGSAYTASKHALAGFTKQLALDYAKDKV
                     QVFGIAPGAVQTGMTQKDFEPGGLADWVADQTPIGRWSQPSEIAELTFMLATGKLASM
                     QGQIITIDGGWSLK"
     gene            complement(32673..32909)
                     /locus_tag="U1041_000160"
     CDS             complement(32673..32909)
                     /locus_tag="U1041_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2829 domain-containing protein"
                     /protein_id="HEM4767305.1"
                     /translation="MTFEEILPGLKAKKKYVRTGWGGAENYVQLFDTIEVHGQKLEAT
                     PYFLINVTGEGEGFSMWSPTPCDVLATDWVEVHD"
     gene            complement(32989..33738)
                     /locus_tag="U1041_000161"
     CDS             complement(32989..33738)
                     /locus_tag="U1041_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767306.1"
                     /translation="MRKLHAYLILASAFHEQEERATELLLSIYQDVLEAQADGQSAED
                     FLGKDSKQMADELLSDLSPIRWYYGLRLTGLISLVYISWFFLGLFGVTGEMVLEWRGL
                     LCDLLLALILPSSAFFILKNLVYERSKIKSYLLMGTWGFSFVGLVGLRFWISRQFYEG
                     VPLPFWASLLVILGIAAGLFYYRSKSAIVDTLIPAYLLTVLSGFSQVTASQFGYGPQD
                     WTGWLPLLFMVLAFFSTLTGTFFLLKKENMG"
     gene            complement(33815..34609)
                     /locus_tag="U1041_000162"
     CDS             complement(33815..34609)
                     /locus_tag="U1041_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767307.1"
                     /translation="MSKQMEYRKQIEVIESQLTKENKEYMGRINGYMMIASVFHKQEE
                     AVTAQLLSIYQDVLEAQKDGLSAEDFLGKDSKQMADDLLSYLPPIGFMEVANLSGLML
                     IIYLGSQWLMDFAGTSTISLNWLDLVCDTVLSFLLPAGIFLIIRGLIYQTSKIKVWAS
                     VLCIPLLFLLICGLRLWAIPEEPDLVLTGWGLAVPLTVLGLALLFFQKEKLVRYVFLP
                     TYLFLIVGGVLHMVMTVPVWLNLLLLLIPAISSWLGVWLLVWKKEK"
     gene            complement(34606..34929)
                     /locus_tag="U1041_000163"
     CDS             complement(34606..34929)
                     /locus_tag="U1041_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4767308.1"
                     /translation="MKETQMLKGVLDGCVLQIISQKEIYGYELVQELRNQGFENMVGG
                     TVYPLLQKLEKNDLIFSQNKPSPDGPDRKYFYLTDQGQSYVNDFWVQWGELVEKVEKV
                     KGEVR"
     gene            complement(34926..35090)
                     /locus_tag="U1041_000164"
     CDS             complement(34926..35090)
                     /locus_tag="U1041_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767309.1"
                     /translation="MKLEKMRREDRELAGITLVTTIITGWALDSILILGILLASGLMF
                     GFFAEEEEDL"
     gene            complement(35277..37289)
                     /locus_tag="U1041_000165"
     CDS             complement(35277..37289)
                     /locus_tag="U1041_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM4767310.1"
                     /translation="MFGLTFRLCLTNLKKNRRLYFPYALMTIVSTAIAYIFASLAFHP
                     DLGQVKGADGVTMVLGFGMIVVMLAVAIMVFYANSFVMKQRSKEFGVYSILGLEKKHL
                     LLMTFLENLVFAASSILTGLLLGLALDKLFYALLLKAMQMPVVLASTFQLKSLVTVLI
                     YLFGIFALVSLFNIGKLGLTDSLKLVQGKKRGDKKTSFLWLQTLLALILLGAGYAIAQ
                     LVTSPMQAIPSFFGATLLVILGTYLLFHAGVISLLNWLKQRQTYYYKPENFISVSNLI
                     FRMRKNALGLATITILSSMFLVTMVGGLNIYIGGKDYIANQNPNDFSIDVGMQPSTSK
                     EQTEKWEEWADAILEEKDIPIESKVGYPYQQAYFSEVTNQQVRFLTNEEAAGMDFSDR
                     VGIGFVLDQASYEKMTGEKLQLASDQVAIYSKGVQYQAGQTLTFDEKEMEVAQVLPKN
                     VTLGHLPDHGSFLLSQYLVIVVQDLAVFENQAENRYYMGFESSLSEEEQVDSQEIFLS
                     STFESELWSSNILPDGTNSISLAYRAYAMRSFFSFAGSLFFIGLLLSLIFLMAVVLVI
                     YFKQISEGYEDRDRFVIMTKVGLDEDQTRQSIRKQLLTVFFLPILLAFVHLAFAYKML
                     SSILLSIGVVNAGLMLLVTAGICGGYLLLYLLVYAITTRSYKQIIS"
     gene            complement(37291..38049)
                     /locus_tag="U1041_000166"
     CDS             complement(37291..38049)
                     /locus_tag="U1041_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767311.1"
                     /translation="MSVLDVQHVQKIYSSLFKAGQVEALKDIHFTVEKGEYVAIMGES
                     GSGKSTLLNILATLDKPTQGKVLLNGLDTQSIKSKEAAAFRREKLGFVFQDFNLLDTL
                     SVKDNVLLPLVLSRFPIDEMNKRLIHTLNSLGIATLQDKMPYEISGGQQQRVAVARAI
                     ITQPEILLADEPTGALDSKSSATLLDIFEQINQQGQTILMVTHSTAAASRAKRVLFIK
                     DGILYNQIYRGERSSQEMYQLISDTLTVMANRGE"
     gene            complement(38145..39125)
                     /locus_tag="U1041_000167"
     CDS             complement(38145..39125)
                     /locus_tag="U1041_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4767312.1"
                     /translation="MNKEMLPDFLTSWLRHRWLFLVSYCLFATTILAYSSLFDIQRNL
                     VFYALTLLTICWLLALLWDFVREFSRFGKIWRGQKVAIGTASERLLQEKVERLEVQNK
                     QILEKQRQEQTELDDYYTLWAHQMKTPIAASQLLVKEVDSSPVRHQLESELFKIEQYT
                     GLVLNYLRLQSFHDDLVIESVNLEELVRSLVKKYSIFFIQANTSLDLGQLDRLVKTDK
                     RWLGLLIEQILSNALKYCQEGTISIFLDGDELVIRDTGIGIAESDLERVFERGFSGFN
                     GRRTQQSSGLGLYLSRKIAAELGYSLKLKSKVGRGTEVRIGIKEVELIFD"
     gene            complement(39118..39801)
                     /locus_tag="U1041_000168"
     CDS             complement(39118..39801)
                     /locus_tag="U1041_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4767313.1"
                     /translation="MQKILVIEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEF
                     QPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSSHDQPMDIVMAINMGADDYVTKP
                     FEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEVSLDLKTMQVSYKQDVEELTRNEFQIL
                     RVLFEHGKEVVSREELMRELWNSDIFVDDNTLSVNIARLRKKLAELGLPDVIATKKGV
                     GYGLVWTHE"
     gene            39942..41111
                     /locus_tag="U1041_000169"
     CDS             39942..41111
                     /locus_tag="U1041_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
                     /protein_id="HEM4767314.1"
                     /translation="MPNLLTYIEETQYDNFYDKPINKLDILALTELSYLPFDNLVPYS
                     FTENGVRLDRLAATFEETYKNNFPPFSMVTKNRLALLGLLAKSKRFKSIKAFGFVDDY
                     QLEQEKQFSAISYRIDRKTIVTCFRGTDDTIIGWKEDFHMTYMDEIPAQRSANAYLEK
                     LMASQNGNFYIAGHSKGGNLALYAACQQATDQQDRILAIYPFDSPGLHKKHLEAPSYQ
                     AIHQRIFPVIPQNSIVGMMLETPENAQIVQSNTLGILQHISFSWEVDGSDFKLAPALT
                     SDSLQTDQALKTWTASLTDDELRDFFDLFFGIFIKAGIERFSDITVNPLQKLQEMDRL
                     RKEFSPQEAEMVDKLIRLLFDTRYQIWRNNIPSPEISLPDWRKLFQRNTTENKEN"
     gene            complement(41126..42250)
                     /locus_tag="U1041_000170"
     CDS             complement(41126..42250)
                     /locus_tag="U1041_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEM4767315.1"
                     /translation="MKLPRFGVEEWLNVHENSAIYDIAGVSISSLTLEELFALSGTNP
                     EDFYKKLQGTKLNYGWIEGSPAFKNSVSQLYTGVKPEQILQTNGATGANLLVLYSLIE
                     PGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEEHGWLPDLEKLRQLIRPNTKMICIN
                     NANNPTGAVMDRAYLEELAAIADEVGAYILSDEVYRSFSGLDVPSIIEVYDKGIAVNS
                     LSKTYSLPGIRVGWVAANHQVTDILRDYRDYTMICAGVFDDMVAQLALASRKEILKRN
                     RRILEENLAILEKWIEKEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLKLLQEYGVLLV
                     PGNRFDRDGYVRLGYACEQETLIKGLEKLSQFLRRFDNKN"
     gene            complement(42400..43161)
                     /locus_tag="U1041_000171"
     CDS             complement(42400..43161)
                     /locus_tag="U1041_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM4767316.1"
                     /translation="MSNQLENAKNLYLRGIRDGEIKEVHENYMGVSYTQHSTGVPDEK
                     EGFAAFFEDFFKRNPKREISIVRAIEDGNFVFVHVHQKLNDGEAEWVTADIFRSDENG
                     RIVEHWDVIDAYPKNIGETEPIYADFELTDLDKTEDNKKIVRRFLVDVLQNGEIEKFN
                     DYVAADLIQHNQEIAQGGAAYKNYLVDKAVNYDFVFKVMGQGDYVVAYSKVWIAGQDY
                     AHFDIYRLKDGKIVERWDNKEVMPDKKDLTNLGKF"
     gene            complement(43171..44682)
                     /locus_tag="U1041_000172"
     CDS             complement(43171..44682)
                     /locus_tag="U1041_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HEM4767317.1"
                     /translation="MNLFETFIERKDEWGIALFEHLRISLLALIIAIAIAVPLGLVLS
                     NKKKLTEWSLQVTGVFQTIPSLALLGLFIPFMGIGTLPAVVALVIYAIFPILQGTLTG
                     LSEIDSSLEEAATAFGMTKLEKLRKFQLALAMPILMSGIRTASIMIIGTATLAALVGA
                     GGLGSFILLGIDRNDSALILIGAVSSAVLAVLFGSVIKFLQDKKPRTILAALLVTLLA
                     VGASYVPLNQSSSKKLVIAGKLGAEPEILINMYKLLIEDQTDIEVEIEPNFGKTSFLY
                     EALKSGSIDIYPEYTGTITTTLLTSPPSDLSNNPEEVYTYAKEAILEQDGLMYLAPMA
                     FQNTYALAVTEDYAQDHGLEKISDLVKVQQTAVAGFSLEFNDREDGNIGLTNLYGLNL
                     NVKTMEPALRYEAIKNGDVQLVDAYSTDSKIVSYKLKILEDDKELFPPYQAAPLLTKE
                     TLENYPELEQVLGALAGKISTEEMTQMNYAVDVEGKSAEQVAREYLEKENLLK"
     gene            complement(44682..45413)
                     /locus_tag="U1041_000173"
     CDS             complement(44682..45413)
                     /locus_tag="U1041_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767318.1"
                     /translation="MIEYQNVSLTCQVNGPILKNLTFDIQEGEFFVLIGPSGSGKTTT
                     LKLINRLIEQTDGDIRIQGKRLKDFDLRELRLETGYVLQQIALFPNMTVAENIALIPE
                     MKGLNKEETLKKSRQLLTKVGLEPDSYLDRLPKDLSGGEKQRIGILRAIIANPKVLLM
                     DEPFSALDPISKAQLQDLIKELHEEFKMTTVFVTHDMDEAVKLADRICLMQDGQVVQL
                     GSPDELRNHPANDFVKEFIRARGGM"
     gene            complement(45406..45855)
                     /locus_tag="U1041_000174"
     CDS             complement(45406..45855)
                     /locus_tag="U1041_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM4767319.1"
                     /translation="MTELRQRSKILARIFYNQDGLYEDYARRHGLNSKSLSILMFIYY
                     ISRGVTQNWISKKTYSSKQVVNATIKKFLDKGYVFFEENPADKRHKKVKLTEEGRVYA
                     SRILDPLEEAEKTALSQFSLEEQEQLLDLFGRYGQALTEILGGETND"
     gene            complement(46165..46701)
                     /locus_tag="U1041_000175"
     CDS             complement(46165..46701)
                     /locus_tag="U1041_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEM4767320.1"
                     /translation="MVKKSSSVWTSLLLGAAGGAAAAAFLASKTGKTVKEKVVNFAND
                     YKENHEEINADFVTKAQDLGKQATERFTEVKTQLETGELTVEDLVKSGKEKSLETFEQ
                     IKEKIAEQNLSTADILEAIKAKTAKAPTVDLTEEDIEDAVVVSEDIEIDIEDVQTEVV
                     SETVSEVASETASETVEG"
     gene            complement(46685..47098)
                     /locus_tag="U1041_000176"
     CDS             complement(46685..47098)
                     /locus_tag="U1041_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HEM4767321.1"
                     /translation="MIIEISVLIIALSIAAVAVYIVLLLKKLGTVTDEAQQTLKVLTS
                     DVNVTLYQTNELLAKTNVLVEDVNGKVSTLDPLFVAVADLSTSVSDLNASARDLTVKA
                     KSAGASTVKAGGALSALSTLSSLLGKKGEKNGKKI"
     gene            complement(47109..47912)
                     /locus_tag="U1041_000177"
     CDS             complement(47109..47912)
                     /locus_tag="U1041_000177"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEM4767322.1"
                     /translation="MNTIEKRLNMDPIAIKLGPLEIRWYAICILLGLILGVYLATKEG
                     PRKKIRQDDILDFILIAFPLSIIGARIYYVAFSWSEYKDNILSIFAIWNGGIAIYGGL
                     ITGAIVLYFFTQYRFINTLDFLDIVAPSVMIAQAIGRWGNFFNQEAYGKAVESLNYLP
                     AFIRDQMYIDGAYRQPTFLFESLWNLLGFGLVCVLRRRPKFLKQGEIAAFYLVWYGCG
                     RLLIEGLRTDSLMFLGIRVSQWLSGVLILVGIVMVVLRRRKSSIPFYQP"
     gene            complement(47887..48819)
                     /locus_tag="U1041_000178"
     CDS             complement(47887..48819)
                     /locus_tag="U1041_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEM4767323.1"
                     /translation="MTVYVKDLVDNLRIECAYSTEELLQKQITTADITRPGLEMTGYF
                     DYYAPERIQLMGMKEWSYLMAMTAHNRYQVLSQMFQPETPVVIVARGLEIPEEMYKAA
                     KEKQIAICRSKTATSRLSGELSSYLDSRLAQRTSVHGVLMDIYGMGVLIQGDSGIGKS
                     ETGLELVKRGHRLVADDRVDVYAKDDVTLWGEPAEILRHLLEIRGVGIIDIMSLYGAS
                     AVKDSSEVQLAVYLENFETGKVFDRLGNSGDTIEIAGIAIPQIRIPVKTGRNISVVIE
                     AAAMNYRAKQMGFDATKIFEERLSNLIEHNREEA"
     gene            49037..49978
                     /gene="manA"
                     /locus_tag="U1041_000179"
     CDS             49037..49978
                     /gene="manA"
                     /locus_tag="U1041_000179"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HEM4767324.1"
                     /translation="MEPLFLTPVMHEKIWGGNRLRTNYHYDIPSDKTGECWAISAHPN
                     GVTTVSNGQFKGRGLDDLYKNEKHLFGNPTDDVFPLLTKILDADDWLSVQVHPDDSYG
                     LAHEGELGKTECWYILEAEEGAEIIYGHNAQSKEELRQQIEAGDWDKLLTHVPVKKGD
                     FFFVPSGTMHAIGKGIMILETQQSSDTTYRVYDFDRRDDAGNLRELHIEKSIDVLTIG
                     PVANSTPAHLKAGNLDSTLLVANPFFTVYKWNIQQEIKMEQTVPYLLVSVIEGEGAIQ
                     VGETSYPLQKGSHFILPADVTDWTFTGQMDIIASHAN"
     gene            complement(50026..51417)
                     /locus_tag="U1041_000180"
     CDS             complement(50026..51417)
                     /locus_tag="U1041_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM4767325.1"
                     /translation="MKKFPTNFWWGAATSGPQSEGRFYKKHKNVFDYWYDIEPEAFYE
                     GVGPDVTSNFYNSFREDIAMMREVGLNSVRTSIQWTRLIDDLETNTVNQAAVEFYNQV
                     FDCFIENGIRPIVTLHHFDLPAELYHKYGGWESRRVVDLFVGFAEQAFKLFGDRVKDW
                     TTHNEPIVVVLGQYLQQFHYPKLVDGKKAVQVAYHLNLASALAIAKYRELGLDEEGGR
                     IGIVLNLTPTYPASQAPADLEAARIAELWNNKLFLEPAIHGHFPEELVDILSRDKVIW
                     KTEPGDDQILRDNTIDFLGVNFYHPNRVQAPAISPSSVGDWKPERYFDSYALPGRRMN
                     LDRGWEIYPEALYDIAITIRDHYNNIPWFVSENGMGISHEERFLDENGQVQDDYRIDF
                     IRDHLECLHHGIEEGSNCFGYHMWTPIDCWSWSNAYRNRYGLIATDIHTQVKTIKKSG
                     EWFRMIVSQNGLS"
     gene            complement(51431..52303)
                     /locus_tag="U1041_000181"
     CDS             complement(51431..52303)
                     /locus_tag="U1041_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018373607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM4767326.1"
                     /translation="MTLLVCDLGGTTVKFGLYDKGRLFNKSSFRTPTTWEEMKSTILN
                     LKDHFSYRGLKGVALSCPGAVDTKKGIIYGRSAIPYIHRFPIQDELSALLELPVTIEN
                     DANCAALAELNLGVAQNATSSIFFIIGTGVGGAIVQGRQLLRGEGQFGGEFGCMILKD
                     GLSMSKLVSPVRRARLFAQQYGYPDSFSGKELFTLAEFGDKRALEVITEIYDYLAIGI
                     YNVLVATNPELVVIGGGISARTDLIEQIQQRLDALLVKTKMEDLTYRIEACEFRNDAN
                     LLGAASHFVERYGM"
     gene            complement(52408..53154)
                     /locus_tag="U1041_000182"
     CDS             complement(52408..53154)
                     /locus_tag="U1041_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM4767327.1"
                     /translation="MEKKRVFLQVSMDDDFNEMNHREPAEEFCFYRAVAKGDLDAVRM
                     NCEQQRFLETDGVGVLSKNPVTNIKYHFVITTAMITRFCGQNGLELEQAYRMSDFYIQ
                     KLDTIHTVQEVQSLHDEMVLHYTEKMRRYHQNDTNSKHVNACKEHIYKNLTERITVDA
                     IADELGVSSSYLSRLFKKEVGVSISTYIRDLKIESAKELLKYGEMSMIEIANHLSFSS
                     QSHFIQQFRDATGVTPKKYRDENAKLKWDR"
     gene            complement(53248..53913)
                     /locus_tag="U1041_000183"
     CDS             complement(53248..53913)
                     /locus_tag="U1041_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HEM4767328.1"
                     /translation="MTHSIENTHENNKVSYMETFQEYDSDTMELADWANGEMFGCRWS
                     PENVSFSVEGLRLTIAQDEKGELTGGEWRTRESFGFGKYEVSMKPIKNTGVVSSFFTY
                     TGPSDGTQWDEIDIEFLGYDTTKVQFNYFINGVGNHEYLYDLGFDASEAFHTYGFEWR
                     NDFITWFVDGEPVHTVTEDIPSTPSKIMMNVWPGTGVDEWLGPYDRAIPLVAEYQQIS
                     YLP"
     gene            complement(53931..55280)
                     /locus_tag="U1041_000184"
     CDS             complement(53931..55280)
                     /locus_tag="U1041_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018164947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 16 glycosylhydrolase"
                     /protein_id="HEM4767329.1"
                     /translation="MSKKIVLSWLCVASTICSLAVNGKQILAEDVASQRLPTSEQIIS
                     DSSETTSLSTETVVAETEVAVTSQSDETSPATTASPENEMISEVVEETVEPSSEVETP
                     KQEAFSTDFDTFDESTAQLADWSNGAMFNARWTPSNVAFSDGIMTLTIDNDGKGGYNS
                     GEWRTQQYYHYGKYEVRMKPISNPGTVSSFFTYTGPSDGTQWDEIDIEFVGYDTTKIQ
                     FNYFTNGVGGHEHYYNLGFDASEEFHTYAFDWKEDSITWFVDGVAVHTATTDIPTTPG
                     KIMMNAWPGIGVDEWLKPFDGNVPLVASYDWMKYTPNTVELPESKIENDEQMTNTTPE
                     ETSEIKSDSNEGSSLSHEISDSNSSSTLHNDSNHQDENSVPSGQQQSNVTLEGKQEVK
                     KTQPLPLPNNNVNQTNLSNQHKLPNTSSQTGWLSMFVGSVLFIVATLVCSFTSRKRL"
     gene            complement(55303..56148)
                     /locus_tag="U1041_000185"
     CDS             complement(55303..56148)
                     /locus_tag="U1041_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003030789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4767330.1"
                     /translation="MSTNAQNHFRRIVAHFVLIVLSFMCLFFFYILIVSATHSHSELQ
                     RGFSALPGGYLWDNLMKVANGGTFPMFKGIINSLIVSGTTAAVCTYFSALTAYGLYVY
                     DFRFKKIAFTFIMAILVMPTQVTSMGFLRLITQMGMYDSFLPLIIPAIASPAVFYFMY
                     SYMKASLPLSMVDAARIDGSSEFRTFNTIVLPLMKPAIAVQAIFTFVGSWNNYFIPAL
                     VLQSKDKMTVPILIASLRGADYMNFDMGKIYTMILVAIVPIVLVYLFLSKFIIAGVTL
                     GGVKE"
     gene            complement(56160..57101)
                     /locus_tag="U1041_000186"
     CDS             complement(56160..57101)
                     /locus_tag="U1041_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018364954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4767331.1"
                     /translation="MKQKRKRINYGKWGYLFILPFFVTFFIFSFIPLVETVRYSFYEY
                     YRSGIREIGPTFIGLDNYISLLQSDILKYAGNTMLMWLMGFIPQIGIALLLANWFVDA
                     RLKLRGQGIYKVIIYLPNLIMASAFAMLFFTLFSTNGPINSIMTSLGIFKEPVDFMGT
                     SLGTRTLVAVMNFLMWFGNSTIMLMAAIMGINPDIFEAAEIDGCNSRQRFFYITLPMI
                     RPILAYTLITSIIGGLQMFDVPQILTNGQGAPDRTSTTLIMFLNNHLKSKNYGMAGAL
                     SVYLFVVSAFLCWFVYKMTNNELKLGRTKMKQKVKKV"
     gene            complement(57152..58525)
                     /locus_tag="U1041_000187"
     CDS             complement(57152..58525)
                     /locus_tag="U1041_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4767332.1"
                     /translation="MNKKVSALLLTALASTALVACGSKSESAGTSQSEEGKVINIYSW
                     NDEFRQRVEAVYPEVKETSADGTITTLKDGTEIHWIVNPNQDGVYQQKLDEALLNQES
                     AAADEKVDIFLSETDYVNKYSSKEADAALPLKELGIDPEKDLSDQYSFTKVTASDEDG
                     VQRGSTWQTTPGVIVYRRDIAKAVFGTDDPSEIGKKVEDWATAKETAKILKDKGYTIF
                     ASPADTFRLYGNSIKEPWVKAGETTINVAPEVMQWVKDSKEWLDAGYFTKTVKGQWTD
                     EWNKEMSSQAKNFAFLFPAWGIDFVLKPNWDGAEGSWAVTTPPQEYNWGGSYIHGAVG
                     TDNSKHVKDIILALTGNKENLLKISKDYLDFTNTQSGMQEAAKDENFKSDFLGGQNAF
                     EYFAPVAENIKIAPLSAYDQGSVELIQNNFNDYLQDKVSFEKAKENFEIAIKERYPEI
                     TEIKWPD"
     gene            58840..61533
                     /locus_tag="U1041_000188"
     CDS             58840..61533
                     /locus_tag="U1041_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellobiose phosphorylase"
                     /protein_id="HEM4767333.1"
                     /translation="MNKVEFIDQNGSFTLKQAQKNHTLYFPLASEKGLKSSITPLLGG
                     DSKISQNSFILEPVSIDNLHNNRSTRNVWTCIDGKETISLTGQSSDYDRDIAKEKQHD
                     QVTAGFMWHQLERTDEIANISTSITNFIPVSANIEVMHIRLKNLSNHPRRFSTYVAVP
                     IFGRSADNLRDHRHVTSLLHRIHTTKNGVVVNPTMTFDERGHHPNHLHYYVAGYTGEG
                     HTPVAFYPTVEEFIGESGNFTHPEAVFQHYPGYSDYKIDGREAMGAFRFEEVTLQSGQ
                     ETSYIVLLGITEEDTNIEEALADYSTDTQIQQHLEQTKQYWNNKVNVRFETGQADFDQ
                     WMKWICFQPYLRKIFGCSFLPHHDYGRGGRGWRDLWQDCLSLLLLEPTQVRRMIVNNF
                     KGVRIDGTNATIIGSGEGEFIADRNGITRVWMDHAFWPLLTTKLYIDQTGDTSILTEK
                     VSYFKDRQVKRGTAIDKEWKEENGSQLLTIDGNIYLGSILEHLLIEQLATFYDVGEHN
                     FYRLRDADWNDALDMASERGESVAFTCAYVGSMMDLAHLIRVYASQLENQTIQLPEEF
                     ETLLSQDLEVYDDYSKKQAVLQKFSEACNHKLSGKTIRVTFAELAVNLIEKANWLREQ
                     IQKTEWLSEDENGWFNSYYDNNGHQVETCHTNHPKMMLTGQVFSIMSYVANDQQIQSI
                     IRSADRHLYTPECGGYRLNTNFNEIKMDMGRMFGFAYGEKENGAVFSHMTTMYANALY
                     RRGYAKAGWKALKSLSNTALDYGTSRIYPGIPEYFRADGKGLYHYLTGAASWYLYTML
                     TEVFGFQGNLGNLILYPKLVAEQFNQQNLAQVTTTFAGKTFILTYHNPLRKEYGDYVI
                     SRAYINGIDLPISDDAYATLSKEKIEKLDSNSIHQITITLS"
     gene            61553..63964
                     /locus_tag="U1041_000189"
     CDS             61553..63964
                     /locus_tag="U1041_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetylchitobiose phosphorylase"
                     /protein_id="HEM4767334.1"
                     /translation="MQYGYFDDKKKEYIITNPATPAPWVNYLGSPEYGAIISNNAGGY
                     SFATSGANGRILRYIFNHMDQPGRYIYIRDNDSKDYWSASWQPVGKDLLDYSIQCHHG
                     LGYTTMNAKYSSIATSTTYYVPKDQTYEVWAITLTNHSNQTRNLTVSGYAEFTNHGNY
                     EQDQVNLQYSLFISRTKFATNKIVQQLHGNLDSLKDEDQVDEKNVTERFFGLAGAQIS
                     SYCGDKQEFLGSYNGYHNPQGILSGHLGNILNTSENACGALSSQVILKPGQSKTIAFI
                     LGEKTQEEADRILHRFTNTEKEIKDDLLALKELWNSRLANLQVKTPSSEFNSMLNIWN
                     AYNCYMTFIWSRAASYIYCGLRNGYGYRDTVQDIQGIIHLHPEMAVDKIRFMLSAQVN
                     NGAGLPLVKFTHNAGHEDTPDDPSYVQETGHPAYRADDALWLFPTIYKYITETGNIDF
                     LDEVIPYANHGKATVYQHLQAAIDFSINHLGPHGLPAGLHADWNDCLRLGANGESSFV
                     ALQFYYALSIIKEFAVEKNDTAYLKQIEQLQEEYYSKIQHLCWDRDRFIRGFTENGEK
                     IGTPEANEANLWLNPQSWAVISGLAKPDQAQQAMNQVLNRLNTPFGAVLMDPPYHKEA
                     FDGALAVIYNQGTKENAGIFSQSQGWLILAEALLGNGNRAFNYYLENSPAAQNTKANI
                     RKLEPYCFGQFTEGKDSPHFGRSHVHWLTGTASTMMVASVEGILGIRPTLDGIRLSPA
                     IPKEWPEVQITKQFRGKTLYITISNPNHKETGCSSLILNGVEIDGNYIDQSLLKEENS
                     ILLTL"
     gene            complement(64069..64329)
                     /locus_tag="U1041_000190"
     CDS             complement(64069..64329)
                     /locus_tag="U1041_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEM4767335.1"
                     /translation="MSIELYKVRQGKIVSGVLAGIAHKLGWESWVTRAIFIAGLLLGK
                     SFLLLIALYIAAAYFLPYKEDRDAERYGTGPRKIKEAEKIHK"
     gene            complement(64319..65080)
                     /locus_tag="U1041_000191"
     CDS             complement(64319..65080)
                     /locus_tag="U1041_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767336.1"
                     /translation="MTQKREERLIELYEKGVLTKEEARACFKEMNQEPDFLFVEEKVK
                     LNFTLPSFKVFASSKLKQSYSFEGIESLFLKLSEGRLTLAKSKNNQISVEICYNQDAP
                     EDKLPRLYVEKKGLYFHSSLACRLTINLPQEWMSVLDLELGQADARLDYLPFEDISIR
                     SSRDKKQQDIRLTTCGGYPQHLYVQLAQAPLTLQTGKGQGIRGQIESQSGHVLVNRKK
                     KNSPYQFEKSGNDLLFLKVQTGQGGFYVKGIKDVN"
     gene            complement(65150..65584)
                     /locus_tag="U1041_000192"
     CDS             complement(65150..65584)
                     /locus_tag="U1041_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HEM4767337.1"
                     /translation="MDLNKYVQEVSLQDFGKEFRHVAIWNRRLRSTGGRFFPRDGHLD
                     FNPKHLEEQGLEVFRKIVRHELCHYHLYFEKKGYRHGDRDFKELLAAVDGLRYAPKLE
                     QAAKPSLLYTCQSCGQVYQRKRRIDLKKYRCGKCRGKLTLKE"
     gene            complement(65571..67727)
                     /locus_tag="U1041_000193"
     CDS             complement(65571..67727)
                     /locus_tag="U1041_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEM4767338.1"
                     /translation="MEEKYLKIAQELGVSLKQIDTVLALTAEGNTIPFIARYRKDVTG
                     NLDEVVIKSIIDRDKALTALADRKATVLAKIEEQGKLTDQLRQAIEEAEKLADVEELY
                     LPYKEKRRTKATVAREAGLFPLARLILQNVADLEEQAASFICEGFDTAQACLAGAVDI
                     LVEAISEDNKLRAWVYHEVQTNSSLTSELKDQEADEKEVFQIYYDFSEKVAKMQGYKT
                     LAINRGEKLGILKVSFEHNVDKMVRFFELRFPQSNSYIKDVIQQAIKKKILPAMERRI
                     RTELTEEAEEGAIQLFSKNLRNLLLVSPLKGKIVLGFDPAFRTGAKLAVVDQTGKLLT
                     TQVIYPVEPAGQRQIAQAKKDLADLIGQYQVEIIAIGNGTASRESEAFVADLLKDFPE
                     VSYVIVNESGASVYSASELARHEFPDLPVEKRSAISIARRLQDPLAELVKIDPKSIGV
                     GQYQHDVNQKSLSESLDFVVDTVVNQVGVNVNTASPALLAHVAGLNKTISENIVKYRE
                     ENGALTSRQQLKKVPRLGDKAFEQAAGFLRIPDATNFLDNTGVHPESYKAVEKLLELL
                     AIDHLDEAAQEKLKQVAIADTAEKIGVGQETLKDIIADLLKPGRDLRDDFEAPVLRQD
                     VLDVKDLVVGQELQGTVRNIVDFGAFVDIGVHEDGLVHISRMVKRKRDKNGRQQALPH
                     PSEILAVGEIVTVWVVEVDIKRNRIGLSLLKPNGFE"
     gene            complement(67805..68647)
                     /locus_tag="U1041_000194"
     CDS             complement(67805..68647)
                     /locus_tag="U1041_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM4767339.1"
                     /translation="MTRYTFSNGVTVPKIGFGTWQIPDGEVAYGAVSYALEAGYRHID
                     TAQIYGNEASVGRAIADSGLAREDIFLTTKVWNDKIGYEDTRASVEESMQKLQVDYLD
                     LLLIHWPNPKASRETIGWKKRNAQVWKALEELYRAGKVKVIGVSNFMEHHLEALLETA
                     EIIPMANQIMLAPGTPQSELVAYCKAKGILLEAYSPFGTGSLFQSQEAADLAKEAGCS
                     VAQLALAWSLDKGFLPLPKSTSPENIKANLEIDGLAISPTAVAKLDTLTGLKGQLDPD
                     LAEF"
     gene            complement(68763..69278)
                     /locus_tag="U1041_000195"
     CDS             complement(68763..69278)
                     /locus_tag="U1041_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HEM4767340.1"
                     /translation="MNTSKWTARDMAEIALVAAIYVALTLTPPLNAISFGAVQFRLSE
                     MLNFLAFYNRKYIIAVTIGCMISNLIGFGVIDLFVGGFSTLIFVTLGVILFEKYKKDY
                     LFGGLFNKAFFYFSFFFAATMFTIALELKVLYDLPFFLTWLTTATGELLSLLVGAVVI
                     DKLSKKINFEK"
     regulatory      complement(69276..69377)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01054"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class II; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF01054"
     gene            69407..69844
                     /locus_tag="U1041_000196"
     CDS             69407..69844
                     /locus_tag="U1041_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEM4767341.1"
                     /translation="MKKLFYQLINNEVILYLIAGVAATLVYMVTRMGLFLVIPSILLV
                     TLLANTVAILFAFWTNDRFVFKQAREGWPQRLVKFVSARIATLVMDMALAYLLVQAYP
                     QLIGQFVNHDLTLVNAIATLFSQVLVIVLNYVLSKLFVFKDKK"
BASE COUNT        19562 a        15951 c        13661 g        20685 t
ORIGIN      
        1 tttgtacctg ctttctcctc ttccgtatca gtgaagccat ccttgtctgt gtccttagcg
       61 actttgactg tctctgctgg ctggatagta tctgtggact tgtctgggta agtaactgta
      121 actgtaccat tgtctgagac tgaaacctct gttccctctg gcaagtcgtt tgaatcctca
      181 acagctttct taacagattc tttctctgca tcagtaagct tgtctggatt cttcacttct
      241 actggttcag ttagacctgg atttagacga tctgcactat cttgacctgc tggagttgaa
      301 gctgggttat ttgcatctgt acccgccgct gcttcttctg tatcagtgaa gccatcgccg
      361 tctttatcca cattagctgg ggttgaatca gccttagttg ggttgctgcc ggctgtgatt
      421 tcttcttgat ctgagaagcc atcgccatct gtgtcagatt tgtttggatc tgtaccacgt
      481 gcaacttcgt cttcattgct gatgccgtcg ccgtccgtgt ctgtctcgct tgaagctggt
      541 ttagaatctg ccttagttgg gtctgtgcca cgttcgacct cttccttgtc tgagaagccg
      601 tcgttgtcac tgtcaacctt gcttggatct gtaccatttt cagtttcctg acgatcgctg
      661 ataccatcac catctgtatc tacaaactga gtaactgcat cttttggctt gatagtatct
      721 gttgaattat ctgggtaagt tactgtaact gtaccatcgt ttgcaactga aacagtcgtt
      781 ccagctggca agtcgttaga atcctcaacg gctttcttaa cagcttcttt ctctgcatca
      841 gtaagcttgt ctgggttctt cacttctact ggctcagtta gacctggatt tagacgttct
      901 gcactatctt gacctgctgg agttgaagct ggatctgttg cgcttgtacc tgctttttct
      961 tcttccttgt tgctgaagcc atccttgtct gtatcagtgt ccactggaac gaaaatctta
     1021 tctttcgaac catcttggta ggtcactgtt acttcgacac ctgcttggcc attcttctga
     1081 agaacaactg gattttcaat tgaaagatcc acagctggct tgtcaccatc tgctgtcaag
     1141 gcaggaacgt caacatttgc caagatctta gcctgatcag cttctggaac agctgtacca
     1201 ttgtcagtcg ctacagaaac cagaacagga tcagtagact tcaagacagg agtgtaggtc
     1261 acattgtccg ctgtcttaat cggaacaaga atagtatctg ccgtaccatc tgggtaggtt
     1321 actttaaccg caacagctgg ctggttgttt ggaccttcta caatcgtagg atcctcaatg
     1381 cttgctgtac cacccttggt atctacattg ttcttgatcg cttcaagatc tgctggctct
     1441 tctacttgag cacctaccgc cggagcatcc ataacgccaa ctggagtttg gctcttcaag
     1501 cttggctctt tggccacatt gtccgcttgt ttcacaggaa ccttgatgat atctttcgaa
     1561 ccatctgtat aggtcactgt cacaggaaga actggttggt caccatccat ttccactaca
     1621 gcgtcatcag cgatgcttgc cttgccacct tctggaacga caaccttgtc aaggataaca
     1681 ttctgatctg ctggatcagt gatgcttgca cctgctgtag gattttctgt aataatagct
     1741 tgagctggtt tgcccgcttc agcttctttc agacttggtt ccttggttgc acttactttt
     1801 tgtacaatcg gaacatccac tgtatctgtc gtaccatctg cataggtcac aatagccttg
     1861 acaactggct gaccgttaac ttcttctacc cgtggatttt ctggaaggct gacaacagga
     1921 gctttctcac cagcagccac tttcggtact ggtaccgctg caataatcgc atccttgtca
     1981 tcctggctag taatagctgt acctggagcc gtcgcagcat caacctgaac aggatctgtc
     2041 acttgacttg gtgtgtactt gctattgtct gcacgtttga ccggaacaga aatcgtatct
     2101 gtcgtaccgt ctgggtaagt cactgttact ggcacaactg gctgaccatc ttcacggaca
     2161 acagtagcgt catcagcaat cgtagcattt gcaccttcag gaactttaac cttagcaaga
     2221 atagctggct tgtcatccgc aggaactggc gtaccagttg ttgcagctgc ctggattggt
     2281 actggagtct ggtctgtcaa gcttggctca ttcgcaacgt tgtctgcctg cttaactggc
     2341 acttcaatcg tatcttgagt accgtctggg taggtcacaa gaacattgac aactggttga
     2401 ccagcatgtg gaccatcttc cttaccagca acaatggtgt tattcaccac ttcagcctta
     2461 cctgtcttcg gatctacctt agcaacaata gcatccaagt tggccttatc tgacaccgtc
     2521 aaaccaacag tcgcttctgt cagaattggc actggattgg tatctttcag acttggatcc
     2581 atagccaaat tatcagcctg tttcacagga acattgatgg tttcagaagt accgtctggg
     2641 taagtcactg tcactggaac aactggtttg ttggtcaatg gatcgttggc aacaactgca
     2701 ccatccgcaa cctcagctgt cgtacctgct ggcaacttgc tcaagtcaac cttagcagca
     2761 atagcttcct tgtccattgg gttgttgatt gctacacctg gagttggatc gatggctacc
     2821 aaaacttcag ctggtttgcc aacttctgga tctttcaggc ttggagtatt tgtctggtta
     2881 tctgcttgtt tcacaggaac tgggacaata tctttagtgc catctgggta ggtcacttct
     2941 acattgacaa caggattgcc agcttgatcc agaaccacct tagcaggttc tgctactttg
     3001 acagattgag gagggtttgg aagaccagct acattgacct tgtctgtaat cagtttctta
     3061 tctgcatctg tctctactgg agtattttca gcgactggaa cactgattgg agctggtttt
     3121 tcaggagctg taaccgttgg ggtgttggct tcattgtcct tctggttaac tggaacagga
     3181 atcacttcgc tggtcttatc tgggtaagtc actgttactt caacgaatgc cttgccatca
     3241 accaccttca ctggtgatgt gatttcctta gtaaccttag gagcctgacc accatctaca
     3301 gctgggactg tcacactatt taggatagct ggcttatcag cttccgcaat cggtgcatct
     3361 ggcgcatctg aaccagtaat ggctaccggt gcttctgcag ctggtgctgt tggggtgtag
     3421 gtctcgctat ctttctggtc aactggaacc ttgatgattt cagaagtacc gtctgggtag
     3481 cttacaagaa ctgggacaac tggtttgtca ccatcaagct caaccttagc tccatctgga
     3541 accttagctg tggtattttc tggcaacttg ctcaagtcaa ccttagccgc aatagctgcc
     3601 ttatctgtat cttgtacagg tgtttcagcc ttagctggtg tatcggtcaa gacaggttga
     3661 tccgcatctg tcaagcttgg tgtgtgcttc acactgtctt tttgtacaac aggaacatag
     3721 actgtatccg tagtattgtc tggataagtc actgtgactg gaacaactgg cttgccatct
     3781 acaagctcaa ccttagcatc ttctggtaga cttgctacac cgttagaacc gtctggaatc
     3841 tgcactgctg acttaattgc ctgcttatca gcgtctgaca aggcagcatt ttcttcagct
     3901 ggggcatcta cctgaactgg ggctgtagga gttgttgggt tgtaggtctc gttatccttc
     3961 tggttgacag ggacttgaac tgtctctgaa gtaccatctg ggtaagtaac tttcaccgtc
     4021 acatatggac catctgggct atcttgaact gctgaaacaa tttctttatc aacctcacca
     4081 gcttccttgc catctacggc agggacagtc acgctatcaa ggatagcttt tgtatcagca
     4141 gggtctgtga tttgcgttcc tagagtttgg gaagcagtga tagctacagg tttatccttg
     4201 cttggagcca ctggagtata ggtcaaatca tctttctggt caattggaac cttgatagtc
     4261 tcagaagtgc cgtctgggta gttgatttcg actggaacga ctggtttgcc atccacgatt
     4321 tcaaccacgg cattatccgg tactttcact tccgtatctt gaggaagatt tgtcttatca
     4381 accttggctg caatagctgc cttatcagtc tcttgaactg gctcatttgc cttagcaggt
     4441 gtatttgtca agactgggct gtttgcatct gtcaagcttg gcgtgtactt cacgctgtct
     4501 ttttggacaa cagggacatc cactgtttca gtcgtgccgt ctgggtaggt cacagtcact
     4561 ggaacaactg gggtaccatt tcggtcaaca accttggcat cctctggaag acttgccaca
     4621 ccgcctgaac cctgtggaat cgttacagca tccttgacag cctgcttatc agcatcggac
     4681 aagctagtgt cggtcgttgc tgctacgtcc aattgaactg gcttagtagg agcttctggg
     4741 ttgtggactt ggttgtcagc gtgtttgaca ggaacttcaa tcttctcttt agacttatct
     4801 gggtaagtaa tttctacttc gacaactttc ttaccttgat ttgtacctgt accgtctttg
     4861 actggcgaag caatcgtctt agtcacttct ggcttagtgc catctggagt cgctgctggg
     4921 acatctacat tggcaagaat agttgcgtca tctgggctgg taatctgagt gtcgtttgtt
     4981 ggctctacag agataggaac ctctttagga tttaccaagt ttggtgtgta aacagctctg
     5041 tcatactggc gaactggtac ctgaacctta tcaactgtgc catctgggta acgaacttct
     5101 gcttcaacga caggcttatc gccaaccaat ttaacagctg ccttttcagg gacatgaatc
     5161 tgaccatttg aacctgctgg tacattgaca ccgaacttca aggcttctct ttcttcagca
     5221 gaaagggttt gacctggcgt cactggacta tccaatggta ctggtgtttc tttagcagtc
     5281 gcatcgtact tggtgctatc tttttggaca actggtactt ctacaatgtc agtcgtacca
     5341 tctgggtagg tcaccgtggc tttgacaact ggattaccgt tcacaagctc aaccttagca
     5401 tctggtgcaa gacttacctc accaccagag tttgctggca cagtcactgc attcttgaca
     5461 gcttgcttat cagcatctga tagggtgctg ttggcagtag ctggggcatc caatttgaca
     5521 gattcagctg gtgctgttgg gttgtgggtt tcattatcct tctgatctac tgggacatag
     5581 acagtgtctg ttgtctggtc tgggtaggtc accgttacct tgacaacttg cttgccatct
     5641 cgttcttcaa ccacaggatt ttggtccaga cttggtgtgc cattagaacc tgtcggaaca
     5701 gaaaccttgg caaggataac attcttatca tcctgttctg tgatttgtgt accagtctca
     5761 tggctagcct taatagcagc tggagcttct ggatttgtca cagatgcttc atacttggca
     5821 gtatctctct ggcgaactgg tacttcaacg ttttctcttg aaccgtctgg gtactcaact
     5881 gtcgctacaa caactggctt gcctgtattg ccatttgtgc catctgtcac acgagcgtcc
     5941 gctggaactg taacggttgg ctgaccacta cctgagtagg tcggaacagt taccgctacc
     6001 ttgactgcat tgcgctcttc ttctgtcaat cctgtacctg ccgttgcagc agagttgatc
     6061 ggtgtttcag tcactactgg tgtgtgctga gcactgtctt tctgcttgaa tggtacggtc
     6121 accgtttcag atgagcggtc tgggtaagtg atggtcactc tgccgtcttc ggcaacacta
     6181 aagtctgtat tttcagggaa tctagatgtg ccttctggag ttttgtttgc ctctttcaga
     6241 gcgttgataa gagtattctt atctgtttct gtagttggac gtgcgctgtc gatgaggact
     6301 ggatctgttt cagctggtgg gacaacctca atgtgagctg cctgagttgg ccatgtagct
     6361 cgaaccgtca cggtcttatc ttgcgataca aaggtttgtt tgaagttctc tggtgcattt
     6421 gcatgagctt ttgtgcgaat aattactgaa atgtctttat tctgaccact tgtaggagca
     6481 tccgctggaa taatgacctc aaaatcaatc atgttgtctt gacctgaacc aacgttaaag
     6541 ttaatcttag gtctaacatc ctcaggagtt agtgattgac caaaggcttt ttcaatagct
     6601 gtctctggtt gattaacagt ggcatcaacg acacgaacat agaagtcatt tgtcgccgca
     6661 cttgcttgac ctaagttatc caaagcacga agcttacggg tatgtttgcc gacaccataa
     6721 cttgtacctg ttttaccgga aatcaaggct gccttggtat tattttcctt gtctttttca
     6781 ccaaccgtca agcccatctc atctttagtg cttccattcg tagagacgat ttggacatca
     6841 ctgattgatt cgttatctgc aaagcctgcc aactccactg gagtggtcat atctgtattc
     6901 ttgaagacaa ccaaatcatg tggctgggtc gttactgttg gaatacccga tttaagcggt
     6961 acatttacgt cttcactaga ggtatcattg taggtaaccg tcaccgcacc attaggagca
     7021 acatcatagc gtgtgtcttc aggcaattta cctgggttgg ctgctttaag tgcatcgatg
     7081 atggtttgtt tttcatcctc tgctacagtt gtccccttga tttgaacagc ctcaggcact
     7141 accaattcag tactatccgc aagggtatct ctctggcgaa ctggtacttc aacgttttct
     7201 cttgaaccgt ctgggtactc aactgtcgct acaacaactg gcttgcctgt attgccattt
     7261 gtaccatctg tcacacgagc gtccgctgga actgtgacag ttggctgtct gtcgccagct
     7321 gggaagttcg gaacagttac cgctgccttg actgcattgc gctcatcttc tgtcaattct
     7381 gtacctgccg ttgcagcaga gttgatcggt gtttcagcta ctactggtgt atgctgagca
     7441 ctgtctttct gcttgaatgg tacggtcact gtttcagatg agttgtctgg gtaggtgatg
     7501 gtcactgcac cgttttcagc aacatcaaat ctagtatttt cagggaattt agatgtgcct
     7561 tcgggtgttt tgttggcctc tttgagggca ttgatcaggg cagtcttatc tgcgtctgaa
     7621 gttgggcttg caccatcaat gagggtttgg gcagttggag caacaggtgt aatcacatct
     7681 ttttgctcag tataatctac aggaatgtca tttacgatag tttgaccata gatgttggtt
     7741 gtttccaatc ttacagtgta gttgccactt gttggaagtt cagaaatgtt agtaatagtc
     7801 gtgtactgac cattttcttg tgtataacct gcaactttgt gagaatagtt atcagcagga
     7861 acagtcatgc cagtgcttac taacacacca agttttcctg tcaattcatc ctgactgagg
     7921 gctgtcccaa attctttggc aatagcattg ttatcagtct tttcaacacg gtaggcctga
     7981 atacggatgg tctcagtgat ggttgattta gcaggattgc cattatctgt cgccttaatc
     8041 ctatgatgcc atctactatt gtaaccattg cgaaccaagt tggattgaat acttttattg
     8101 aaatcagcta ccaacttacc ttcagctgta aaagcaatac ctgtatcagt cgacttggct
     8161 tcgctgtcca atccaatcaa ctcaactgaa gcaatgcctg tattgtcttg gacagggatg
     8221 ccaccgcttg ccttagttgt gtcaaaggtt ggtgcgtctt caacaaccgc attgttttca
     8281 gtcttagcac caaagacaaa aatggtctta tgggtagaac ttccgacagt tgtatttaca
     8341 ccgaagtcac caaaggttgg cgctgggttg gtttttgata cttgctgagc tgtaagcgta
     8401 tctgtcttgc caccgtgtgg gtaggtgacg gttactcgac cgttttctgc aacatcaatc
     8461 cgtacctgct tgtttgtgtc accgtttgct gcattgtcaa tctctgcgat gtgtgggtta
     8521 gcagttctga cagcctgctt gatggcattc ttctcatctt ctgtcaaacg acttgggttg
     8581 ttgacagaga ctttggcact ttcttctgga gctgccaaac gatccacaac agtgaaggtg
     8641 atgtcggtga aagtcacttt ttcactagtt ccacgtggtg tgttaccgtc tgcaacacgg
     8701 aatttataag tcgtgcgttc caaggtttga cttgggttgg cagtcaagct taccgttcct
     8761 gtacgtgacc gtttgccata attatgattc tcgaatacaa attctggaga actgtctggt
     8821 atagaaattg taaaggcttg aggggtattt ccgtttgtaa agttgaggat agctggcgtg
     8881 agtggatcag aagtgttgtt ttctggacga atactcatcg ttcctgttga cacaccgccc
     8941 tcagtaccaa acatagagtt atcctgaatc ggaatcgtaa tggtcgcttc ttgacctctg
     9001 ataaggacat gctctgttgg agtcgctgtt ggggcaatgt catctttcag gatatagcgg
     9061 tactctagtc ttggcgaaac cacaccatga gtattggcaa ctgtgaagta gaatttggca
     9121 atgcctgtac cagtaaagtt gacaacaccg ttttcttcga tggtggtgaa gtaacctact
     9181 gctccattat cctgctgtct gtcatacttg acaaacttaa gaccaagcag ttgaaggtgt
     9241 ctttgtgttg cttcatcgaa tgtgacagag tcaatattga taccagattc ttgatctgtc
     9301 acgattaact cattcagtcg tgtagaattt tcaccatatt cttctactgg tgttggttga
     9361 tttggtcttg gtaccttacg acctactgta ctgattgcat gagcagctac atcgctatag
     9421 atttccattc tatcaccacc caaaactggc ggcgttgtat cacgatctgg tgcatgaccg
     9481 tcaagggcga ttctagctgt ttgaagttta ttgagtgctt cgtcaacttc atcctgagtc
     9541 gcagcaggat tcgtcttatc ataaacctct ctcgcttttg taagggctgc ttcataggcc
     9601 cgtttcttgt cgtcactagc gtaggtatac tcagcattag ctggatcttt aacctgagta
     9661 gagcgatcaa tctcagcctt gaggttagtc ttatcaactt ccttggtaat tggtcgagtt
     9721 gagccgttca agcctgtaat tgcacttgtc aagtctgaga taagctgggt cactgataca
     9781 gtcggtagct caccaccttg tggggttacc ttcttggcag catccaaggc agtatcgaaa
     9841 gctccttttt gagttgagtt tgcatttgaa taatcacttg accgcttgat cgtttctgct
     9901 tgcgccacca aatccttcaa gtgtttcatt tcaccgtcca aggcacgggc acttgtcagc
     9961 atgtctgcca caccttgttg agacttatct ctttccaagc ctgccaacaa ttcttctttt
    10021 tgcttattgt tgatatttgt cagctggttg atggcatcct tggcctggat atagtcgctg
    10081 taagctcgtg cctggtcgac tgcattggta atctctgatg gggtttgggc acggtctaca
    10141 attccaagga actcattttt cttctcttct ggtaggcctg agatggcatt gatatcacgt
    10201 ctggcctggt ctctgagaac ttctgccttg gctctttcta ggatggcttc tatccgttca
    10261 gctggttttt tgccatctga gctgacagta ttgaaattag tctctgtgat ttgagcacgc
    10321 aattcatcct tgttgcttgg agctggattc atgttatcga gctgttccaa ggcactgcgt
    10381 ttcaggtctt caaaggctgc ttcttcgatg atggcgttga tttgatcctg tgtggttgca
    10441 ttatcaattc ggtttctgta aggtgttttt tcaccatcat ttagtttgct gagggcgttg
    10501 atagcctcct tgcccttgtt cctcatattg gtggtgttga gggctttggc atcattgagt
    10561 ttctggtcaa ctacagtagt cgtcgttgcg ctattgatag cattgatggc tgccgtcttc
    10621 tcattttgag aaaggtgcgg aagggcattg atttcctgga tagccgctgc tttcttctta
    10681 tcgagggcat tcttctcatt gcgtgcttca gtgatgatcg cttcaatagc ctgctggttt
    10741 tgggccgcat cgattctgct cttccaatca gcagccttac cattgatgtt accgatgcta
    10801 tcgatggtag ccttggcttc atccttggta gtcttcaatg gatcttcttg gtagaagagc
    10861 atagcaggtg tcaagagacc gtagacttgg gtgtttactg tgccaccaaa acggctatct
    10921 tttgtaaccc ctctaacttc aataccctga atttgagttt gtctactatc tgtatactta
    10981 attgaagctg taagatgttg agccttccag ttatctggtc caaatgtacg cgccccattc
    11041 ttgaatcccc attgattatt ccaagattga agctgtttat tcaactcaag aaacttattc
    11101 aactgttctt gccactgggt cagataggta gctttatttc caatagtagc gatgttggca
    11161 actgcttttt tagctggcaa gtttaattga tggtcttcac cttgcaaacc aaccatctcg
    11221 tttccaacta ctcctcgtcc cttaaggaca aaattagtcg aagtagatgg agctgttggt
    11281 gcagcacctg atgcagtgtt gattttataa accaactgct tcatcgggat ggtcttttct
    11341 gaaccatcct tgaatcggag gactgcattg ccaccgatac catcagatga taccgtcaca
    11401 tttgtaacca gtggacctgc accattgaag aggtctgggt tagcttcacg gattttttgt
    11461 gcgatgttat tgcgtgtctg ttgacttagg tcttgcagac tgttaactcc tatacgagca
    11521 ggtgggttaa tggtagactt ttcagccagc gtgcgggtat ctggcgttgt gccatactga
    11581 gccaagaagt tagcatgact tccagactct tcattaagac ctacgacgaa gttcatcgga
    11641 gcattgccgt ctttcacacg agcacggaac ttatagacat gcttatcggt agagccacta
    11701 aatctgttga tgtagacagt tcgggaagtg gctttaaagt cactagcagc ttttgttaga
    11761 gcttctttac cactaccagc attgttagga actgagaaca tcagacgatc ccagtcaccg
    11821 ttccatctgc cttcgctttg accaccgatg gtatctccac caggatcagt tggagatgtt
    11881 acttttttat gtctttcgcc ctgtaaagaa tctggactac ctatgatata gcgatggtcc
    11941 caaaggcggt accatggctc atccgcaaat ctgtaatcac cctgccatgt tctatactct
    12001 gtggtttcac gaggggttct ctcaccttgc cagtagagtt cccgagtgat cttttctggc
    12061 tcgtaaaggg atttcggcat attgaaatac agaaaacgtc tcgcatagcc gtcatgatct
    12121 tggttgaagg tcagtgtgac atccacatac tggactccat ttacctctac aaatgacttt
    12181 tcaattttga agtccccgtc actggctaga gcttttggcg aaccgttacg aacatagcga
    12241 atttctacac ctggatcata gtctgtacca gcttgaactt gctcgacgcc actcaagacc
    12301 attccactac cgataaccag tgaaacaaca ccgattgtca acttacgaat accaaattga
    12361 ctgcgctttt caaagttaaa ggcttcttga cgatttaact tatttcgttt aattttaaac
    12421 aaattcattt cctcctattt ttggcattga cggaaaagga actagactgt agacaattaa
    12481 atctagaact agttcagttc acacatctta taggtatcct cctctctttt ccaactgaag
    12541 caacgacaaa aggcggaaac ttctgtccga agtccgccac aaaaaaacta tagaaaatca
    12601 aaaagacagt ctacacctat ctgtctgtct atctgtctgt ctgtctatct gtctatctgt
    12661 ctaatggtaa gacatttcat aagaactgtc aactccttat atcaatgcgt tgtaagtagt
    12721 ttaccataca ttttaaattt tttcaagtat ttttgcaatc gattataagg tcgcagacaa
    12781 aactttcgag caagcgtatg gtttataatg gtttgaatta ggaaatggac atgtttgagt
    12841 tatagtatca gtagcccact tccaaaataa ctttagagtt ctcaaattga taaactcaga
    12901 tgtatactgt ttctaattca tattccttat agaaaaaaag attgccctaa gacaatcttt
    12961 ctattgatta aagtgagtta ggatcaactt tgataccaac accttgtgtt gttgtaatag
    13021 atactgaagt catgtaagta cctttagctg tagctggttt agctttagcc attacatcgt
    13081 ggaaagcttt gaagttttca acgagtttgt cagcgtcaaa tgatacttta ccgataagag
    13141 cttgtacgat acctgctttg tcagcacggt aagtgatttt accaccttta gactcttcaa
    13201 ctgctttagc aacatccatt gttactgtac cagttttagg gtttggcatc aagttacgtg
    13261 gaccaagtac acgaccaaga cgtccaacaa cagccatcat atctggagtt gcgataacaa
    13321 cgtcgaagtc caaccaacca ccgttgattt tagcaacgag gtcgtcttca ccaacaaagt
    13381 ctgcaccagc aacttttgct tcttctgctt tagcaccacg tgcgaaaaca agaacgcgtg
    13441 aagttttacc agtaccgttt ggcaatacca ttgcaccacg gatttgttgg tctgctttac
    13501 gtacgtcgat gttcaagttg taagcaactt caactgacgc atcaaattta gcgaagttag
    13561 tttcttttgc aagagcaaca gcttcttcta cgctgtaaag ttttgtgctg tcgatttttt
    13621 caagagcagc acgcaagttt ttgctttttt tagccatgtt atatgtctcc ttgtaatcag
    13681 ataatcttgg gtgctactta gtcagtaaca gtgaatccca tagaacgagc agtaccttcg
    13741 atcatacgca ttgcagcttc aagagatgca gcgttcaagt caggcatttt agtttcagca
    13801 atttcttgta cttgtgcacg agtaactgtt gcaactttag ttttgtttgg tgtacctgaa
    13861 cctttttcaa cacctgcagc ttttttcaaa agaacagcag ctggtggtgt tttagtgatg
    13921 aaagtgaatg acttatcttc atacacagag ataactactg ggatgatcat accagcttgg
    13981 tcagctgtac gagcgttaaa ctcttttgtg aatcccatga tgttgatacc tgcttgacca
    14041 agcgctggac cgactggtgg agctggagta gctttacctg caggaatttg aagttttacg
    14101 agtttttcga cttttttagc catgatataa aatcctccta ttgtggtttt ggcggtaatt
    14161 aaagattttt acctcccaca aatatgtgtt ttacacatac cttttcatta tacacgaatt
    14221 tcaaagaaat gcaagcttta ggtttacttt ttttcacatt ttttatagaa tgaatgtatg
    14281 tttgaatcga ttatattttt aaaaatagta gccttcctat ttatctttct aaccttggcc
    14341 atttcgataa ttgctgtcaa gttttttagg ttgcaaaacc gaggctggaa ctttgcagac
    14401 attgcctttc ctctctatgc aattgaattt tatctgattt cggacaaggc ctactataac
    14461 agtctactgc ctcagcttgt cttagccctc tcactactag cgattggtct ttgtggtttc
    14521 ttcctcttca ggaaaaaaga attttcctac aaacgctttt ttaaggtctt ctggagagct
    14581 agctttatcc taaccttctt tatgtattta gccctagtca tcgccgtatt aacactcaaa
    14641 tcctagaaca aagcccctgt agcctcaagg ctacaagtgg cttattttat tcatgaattt
    14701 caagtggcag accatcaggg tcaaagaaga aggccatctt cttcccatca aaatcatctg
    14761 tacgaagggc ttcgtgtcga atgtccaaac ggtcaaattc ttccagacag gcttccacat
    14821 ctgcaacctg gaaggctaga tggcgtagac ctgtatgttc aggattgggc atggtcggac
    14881 gcattggcgc atctggtttg atgaaaattt ccaaaaccaa attgcctttt ttgacattga
    14941 agagaatatc atttttttct ggtcgaatat gctcatccac ctgttcaaag cctagtttct
    15001 caacataaaa ttctcttgtt ttgtcatagt cactaccgat aattgcaata tgatgaactg
    15061 catcaaattt cattattgtg tttccaatac ctttctaggt tttgttcctt cagctggacc
    15121 aatgacaccc gctgcttcta gctcttccat aaggcgagtt gccctgttaa aaccaacaga
    15181 caagcgtcgt tgaatcatag aggcactggc tttttgtgtc tcaactacca aggcacgtgc
    15241 ttcgttgaaa agtggatctc ctccagcatc accaaaacct gcatcgccat caccttctgc
    15301 cacttcacct ggatcaaagg attcatcata atctgcatct gcctgatcct tgataaagcc
    15361 aactattgct tctacatcat catcggatat aaaggaacct tgcaagcgga caggatggtt
    15421 ttcatcaatc ggtttaaaga gcatgtcacc gcggcctaag agtttttcag caccattttc
    15481 atctagaatc gtccgactgt ctgtaccgct tgatacggca aaggcgatac gagatgggac
    15541 attggcttta atcaaacctg aaataacatc aacagatggt cgctgggtcg caagaatcat
    15601 gtggatacct gctgcacgag ccttctgtcc caagcgaata atggcatctt ccacttcctt
    15661 gctggctacc atcatcaagt ctgccaactc atctacgatt accacaatga gaggaagcgg
    15721 aatctgtttt tcttctgaac ggctattaaa ttcttcgacc ttcgcattat aaccttctaa
    15781 gtttcggaca ccaatctggc taaacaactc atagcgtttc tccatttcat ccactacttt
    15841 ttgaagagct cgagcagcct tgcgtgggtt ggtcacaacg ggaatcaata ggtggggaat
    15901 atcattatag accgataact cgaccatttt ggggtcaatc atcatgaact taacttggtc
    15961 tggaccagct ttcatgagaa ttgaagagat gataccgttg acagcaacag acttccctga
    16021 accagttgaa ccagccacca atagatgggg catacgtgct aggttaaagg aacggacgga
    16081 accattgact gccttaccga gaggaatttc cagaagtttg tctgggtctg ttttagattg
    16141 ttcccagagc tcacggaaag gtactgtagc cacttcggag tttggaactt caataccgac
    16201 cagagatttt cccgggatag gagcttcaat acggacatct ttagccgcaa gggctagagc
    16261 caaatcatca gctaggttag aaatccgatt gacacggacg ccgactgctg gtttgacttc
    16321 atacttggtt accgatggtc caatctcagc acgctcaact actaccttga ttccaaaact
    16381 ggcaaaggtg tcttctaaaa ctttaatatt ctgacgaaca attcgttttt cattggactg
    16441 actcttagct tttataggag caaataagtc tatggacgga agtttatatg ctagtctctg
    16501 cttaggcttg aaatcaatct ccacatctgt ctcgtccttc tcaaactcat ttggttcaga
    16561 agcctggctt gccgagtttg attgtgctgg ttggtcatct tctgccaaca taataggaaa
    16621 ttcatcttct atgtctaagt ggtcatattc tgaaataatc ggtacttgaa cagtctcttc
    16681 ttcgaggatt tcacccgttt ctaaatcgac atgtctatct accagtgcca aagcccgagc
    16741 tgactcttcc tctagacgaa ggcgttcctc ttctagacga gctaattctt gctgacgttt
    16801 ttcttctcgt tctgcttttt tctgtgttcg aagctctgct ctttttacct gcgtctccac
    16861 caacttatct ttggcaaccg ccaagccatc ggcaacatca taaacagacc atgggcttac
    16921 aaaaaagata ccaaatacta tcactagaag accgatgaag aaggaaccga catttgcaaa
    16981 gaggaaggag actggcagat agaagatact tccaatcatc cctccgccta gaaatgctgt
    17041 tacctgaaac ttagctaggt ctgacaaggc caattttaga gtatgaccga ataagtcact
    17101 cccttggtag gtccagtcta agtaagcctg aaattcaatt aataacccga taacaatcag
    17161 ccagaagccc gatatggccc cttctctttc gcgtaagact ttgggaataa gaaggtagat
    17221 aaatgcaccc gccaataata gataggccag actaccaaat aatagccgga aaatattgta
    17281 gctggtcact ccaaacacac ctaggcgact ggctgcaaag gcaatgaata aaagccccaa
    17341 tactcgaaat gtgatatttt taacacgctc ttgctgtgct aattctgcct tggttggtcg
    17401 cctcgtagcc tttccttttt tacttgtctt tctcatagat acctcaactt tctcaatctc
    17461 tttattctat cataattggg aatatttttc atatcagaaa aagtcctgca ttatacagga
    17521 cttctcttgg agtgaaagaa taatttaaga gggcaaataa tattatagag cgtttagaat
    17581 aatctgacct tctacgtaga aggttgatgt caaggtttct tgaccgtcgt tgataaagat
    17641 ttccaagcag ttggtgtcaa ttaagactag taattctttc gcttcgacgg tcactgctcg
    17701 gcgaaccgtt gaccactctt cttcaccagc ttgctggatt ttgaggtgac tacggtcaat
    17761 atagacttct tggctttcct tatcgtaacc aaattgcagg taatcttggt cgcttccaag
    17821 ttttagttcc aaactgtctt ccagtctaag agagagcttg cttggacctt ggatactttg
    17881 tccaatttca atatccttga aggcttccaa gacacttgtt ggcagaactt ggtgcaatcc
    17941 gttttcagtc ttcttgagaa tgcgtggaag ggtcatctga ccgtaccact tatggcctag
    18001 gtcattggtc accaacttgc gaccccaggt gtgcatccag gctaccatga tccgttcgcc
    18061 ttctggacct tcggtagtct gagctgcgta gaagtcatgt ccgtggtcaa tttccttaaa
    18121 ggaatctgcc acaaagacct tcttatccca gtccacatga cctgtcacaa agatgttgga
    18181 gttgatattg ataaagtcat ttccgtcttt ttggtaacgc attggagaga taatcaggta
    18241 ctcttgaccg tccacttcaa agtagtcagg acattcccag acaaagcctt ggttggcctc
    18301 acctttcaag aagatggact caaatttcca atccgtcagg ttgggagagc tgagtaagac
    18361 gatacagccg acattgtcct tgtgcttggt tgcgacaaca gagtagtagt gaccatcttt
    18421 ctcaaaaatc ttcggatcgc gaaagtcatt ggcaatgact tcttctggca gtccttctgc
    18481 tgttgcgact ggattctgct cgattttttc aaagtgaata ccgtcagtcg agaaggccat
    18541 gttctgaact tggctaactg tcccgtcttc attgatgatg tgacctgtgt acatgagcca
    18601 gaggacatca tctttgacaa tggcagagcc cgagaaacag ccgtctttat cgtaagcttt
    18661 atcgggagct agggcaactg gaagttgttc ccagttgacc aagtccttac ttttcgcatg
    18721 cccccagtgc atcggtcccc aaacactctc gtaagggttg aattggtaga acaaatggta
    18781 ttctccacgg aagtagataa atccattggg gtcgttgatc cagcctgttt ctggtgttaa
    18841 atgggctttc ggtttgaaaa ccggattgac ctttcctttt tctgtctgaa taaattgatt
    18901 ggcttctact actgttttca caggcagcct ccttttaaat tactgatttg ctttgtattg
    18961 atcgtagtat ttttgcttga tagctaacca gtcagaaaga ccatagcttt ccaattcttt
    19021 caagtagcta tcccattctt cttcgatacc accgttgaca atccattctg cacgtttgcg
    19081 gtagatgaag tcgttcatat ctgcttcaac ttgggcaatc ttatccaaat cttcttcttc
    19141 catgaagaca cgaggataga tatcatcgtt ggttacatag tcaagatagg tagcgtgcat
    19201 caagtccaaa cgccatttag catcgtctgg catggttgtt acagtaccat agtattcatc
    19261 aagaatagca agcggtccac caacttctgt cttctgacgc aattcacctg gagctgtacc
    19321 gttcaatggc aagtgtttta agctattggt tactttgtca agttcaaaaa tattttgctg
    19381 tgtttcatcc ccataggtac cccagttgtt ttgaacagac tggattggtt tgtattgggc
    19441 atcaatccac ttggctgtca attccaagtt tttatttgcc gaggtgataa ccatgcggtc
    19501 acgctggaag cccataccgt ttgtacgtgt aatgtgcttg gttccatcag gacctgccaa
    19561 gactggcaag atatcataag tatcgttcat acctgtcaca tttgccttat cccaagtgaa
    19621 gtaaacaccg tatagatttt cactaccttt ggcaatgtaa gtattccaat cttgttcaaa
    19681 cgcttccgga tctagaagac ctttttcttg aagggtacgc ataaattcaa caccttcttt
    19741 gtagtcttca ttgtccgctg tgaagtcaac agttccgtca ttgctaacaa ctaagtgatc
    19801 atcattatca ccaacaccga atgccccaaa aagaattttg aagtcttcat ttcctccacc
    19861 attaatgaag cccatcggaa tttcatccgc cttaccattt ccatttggat cttgggtctt
    19921 gaaggcttca aggaccttaa tcaagtcatc cgttgttttt ggcatttcaa gaccgagttt
    19981 gttcaaccat tctttgttga tccaagcaat atcgttaaca gtgtggatag actccttgtc
    20041 ctctcccaat tcttcaatcc atgggaatga gtagatatga ccgtctggtg ctgtaatcat
    20101 ggaacggtac tctggatttt catccaaaat tttcttgagg tttggcatat gctcatcaat
    20161 caagtcttca actggtacga taaccccttg ttttgcccag ttcatcaatt ccacatcgga
    20221 agcaccgtca ttatggatgg cgtctggcaa atcacccgaa gcaatgtcca aattccgctt
    20281 ttcaccaaag tctgactggt agtttgtcca atcgatatgc acacctgttt cttcttctaa
    20341 acgcttgaaa attaattttt catttggatc tgctggagct aaaggcgaac tagctgtcat
    20401 gaacttaagc gtaactgatt tttcaagcgg gaattgaaca tctttcaatt cataatctgg
    20461 gcttgaagca gtattttttg agccacaagc agccaacaaa acggtacttg ctagaagcgt
    20521 aacaactgtt tttccaaatt tgtgtttcat cagaaacaac ctcctgtatt tgtaaattga
    20581 ttttttagaa tatctttcag tttcctttta ttactaggca acgaactgaa ggctgtactg
    20641 aggtacggca aagtgagtta acgacgtaag aaaagagaaa acgaaagata tttattaacc
    20701 ttttaatgaa ccagccataa tacccttgtc aaagtatttc tggaagaatg gatacatgac
    20761 aatgagtggc aagcttgaga tgacaatggt cgcatactta atcatttctg cgattcgttt
    20821 catttcattc atggcagcct gggcaccaat catatcctta gctggctcgc tttgaatgag
    20881 gattttacga agtactagtt ggagtggctc caagtctgga tccttgatgt aaatcatggc
    20941 atcaaagtaa gaattccatt gaccgacgaa ggcatagagg aagagcacaa acataattgg
    21001 cttagctagt ggaatcatga ttttccagaa aatctgaaat tcattggcac cgtccataac
    21061 ggctgcttct actaattcat ctggcaagcc ttggaaatag gtccgtgcca agatgatatt
    21121 ccaaacattg actgcaccag ggataatgat ggcccagacg gtgttcagca tacccaaatc
    21181 tttaaccaag agataagtcg gaacaagtcc gccaccgaag aacatggtga aaacgaggaa
    21241 ggcattaatc cattttttcc caaccaaatc ttttttagag agtggatagg cagtcatgac
    21301 tgagatagcc actgtcacaa aggcaaagga gaaggaataa aagagggagt tgaaaaatcc
    21361 gcgtaggata gacttgtctg aaaatacccg ttgataacct tctactgtcc agtcctttgg
    21421 atcaaaacta attcccttgc tgaccaaggc ctgcgggtcc atgaaggacg cgactaggat
    21481 atagaccata ggcacaactg ttatgagaac aagaaatgcc agcaagattt tattgacaat
    21541 cagcattcgc ttgtcaaatt ttgtgtacat ttgtgtattc atacgaacct cctataagcc
    21601 ttgtccgtca ttgactcgtt ggacaatctt attcactgca atcagcagga taatattgat
    21661 aagtgcgtta aataagccaa ccgctgttga gtaagagtag tcacctgaca ccaaaccgat
    21721 tttatagaca taggttgaga tgatttcaga gctggtcagg ttgagggaag tctgcatcag
    21781 aaaggctttt tcgtaaccaa cgttcatgat gcccccagct gctaagataa actgaatgac
    21841 cataactggt tttagtgctg gtaagtcaat atgccagata cgttggaaga tattggcacc
    21901 atccagtttc gctgcttcaa tcaaggccgg atcgacattg accaaggtag ccgtgtagag
    21961 tgttgacgcc caacccattc cctgccagat accactcaag atatagagag gtctgaagaa
    22021 gtctgggtct gtcaggaagt ttgcttcaat gccaaacata cctaggatgg agttgaccgg
    22081 tcctcctact gagaagaaga ggaaaatcat accgacgatg accacgactg agataaagtt
    22141 tggagcgtac agcaccaact gaatccgttt tttagcctta tcgctcaata attgattgag
    22201 catgatggcc aaaataatag gtggaagaaa tcctaagagc agaccgtaga cactcaattt
    22261 caaggtgttg gcaagtaagg tagcgaagtt tggagaagag agaaacttgg taaactcttc
    22321 aaacccaatc cactcactgc caagtacccc ttttaaagga ttataatctt taaaggcaat
    22381 cagtactccg tacataggaa tgtaacggaa gatgaaagtt aagaccaagc ctggtagtaa
    22441 catcagtaac aagagttttt gttgcttgat tcgatccaag agcccagctt gttgcagttt
    22501 tgatgttttc ataagaactc ctttttgaaa cgtttcaaat ttattgattt tagaaagagg
    22561 tctaaccctc cgttttttga aacgtttcat ttttcttgta aaaataaaac caactgttta
    22621 ttgatgattt tattttacca ttgtaaccgt tttctgtcaa cccctatttt caattttttg
    22681 tcgtttttcc ttcaacatag gaaatcggca aggtgatttg ttgtggttgc ccttttctat
    22741 caatgatatc aatcaaacaa gccactgctt cttgagccat tctttctaac ggttgacgaa
    22801 tggtcgaaag ggctaaagat ttttcacttg ccaactgaat accatcatag ccaatcacct
    22861 gcacatcttc tggaacccgt cgtcccagtt tttccaaaac agcaagtgtg tctagggccg
    22921 taaaatcatt gatggtgaaa atggcgtcaa cctgtggatt gttaattaga aactcttcga
    22981 cttgaccgac aaagtcatca tatggctctt ccaagtccaa gacatgacaa agaaaacctg
    23041 cctctaaaat tcgcttttca aaatacaatc tacgcttctt ggtttcgttg attgttttat
    23101 tgtgcccacc gataaaggca aaatggcgac ctccttttgc tatcaaggta ttcgctgcca
    23161 gttccgcacc agctcggttg tccgaactga cacaggctat gtccttgttt tcataaacac
    23221 gatcgatact gacaaatgga atgttggagg ataggtaatc atcaatcggg ctataggtga
    23281 tagcgataat gccgtctacc ttgttttgtt gcagcatagt cagataatcc agttcccttt
    23341 ttggaccaga aatattgcaa aggagcaact tgtaattttt cttactcagt tccacttcaa
    23401 catgataggc aaattctcca aaaaagggat gccaaactgt cggaataatc aaggcaatgg
    23461 tttcggtctt gttctttttc atgccacgag catagacatc tgggatgtaa ttcaattcct
    23521 taatggcagc attgactttt tcaagcgtac tttccttgat acctggctca ttgttgataa
    23581 ctcttgatac agtcccaacg cttacaccag caacccgcgc aacgtctttc atggtgattg
    23641 atttttgctc ttccatggtt tacccctttc ttttgaaacg tttcaataat ttatactaga
    23701 atatcattga tagcgttttc tgtcaagaaa aattgacttg ttagcaaata aaaacaccca
    23761 aaaaactgga ataattccaa cttttgggtg ccgttcaaaa atcttttcta ttttatttgt
    23821 acatcttctt cattgggtgt tttgcaagca cttctgggtg attatcgagt gcagctctac
    23881 ccttttccgt caaggcataa cctcggacgg taaagtaagg agccagtttt tcttctgtca
    23941 agttgtcctt gagggcagtg tcgaggtctg ccgccttcat cttggacagg cctgtcacac
    24001 cctctgcttt gaggatattt ttcttggcag tcgaggtgat atgatccaat gaatcaaaag
    24061 cggtttcgac gtaggcataa ccgtctgcga tcaactgctc catgtgagca ggaccattga
    24121 taccatacat gtactcaaag tacttggagt agggcgtcgt cgtttcaaaa gaacccaggc
    24181 taatccgcca tagcaaaata atatctcctg gcaaaatacc ttcttccaga cgaaccatat
    24241 tgcgtttggg aacaggcttg gcttctaata gccaggtcgc taggtcacgc tcgggggaga
    24301 tatagggttt gacctcatgg tctttataca tttcttcaac acgattctgg agtgacattt
    24361 actttacctc acgaattgcg taataatttc catcattgtc tgcaaagcta actaccttca
    24421 tgaaaccaag gtccatgact ggattcgttg tgacaccacg ttcaacaagt tcttcgtaag
    24481 ttttggctac atctactgat gtcattaaga ttgatggtgt acctaagttt aattctggct
    24541 ccatctcagc aacctccgcc ttatcatgaa gtacaaattg tacctcacta tctgatttag
    24601 gtgcaataat gtaagaagtt tgggggcctt gcacctgttt ttctacacat tcaaatccca
    24661 ttttctcttt ccaaaattga gctgaagcct caatatcatt cacatataac ataacttgtc
    24721 cgattgattg aatcatctta aatacctctt ttgcgttgta cgaacatgtg ttcaaaccat
    24781 tatacactag atagagatat tctccaaaga aaaacgactc ttagagccgt tcaaaaccta
    24841 ggaaacgagt cccctgaaaa tgcagggtgc ctacatctcc ctctgctaaa agggcatatt
    24901 catctgaacg aaggcgaaat tcctgccgtt ttccctccca ttcaaacgtt acataataat
    24961 tggttcgtgc tacttcgtta ccaaaaacat gggttcgttt agagacaagc ttagccttgc
    25021 aagattcttt gggcgcccga ttgttgtggt gccattccat aaaattttta ataatatgga
    25081 aacaaaccgt cgctaatatg atcgcggaaa aactgtagaa aaggaccgta tgccatacta
    25141 ggcttccatc tggggcaaac aagttctcaa acatcattat tctccttttg tatctgtaaa
    25201 tatagtatat catattattg ttttagatac gctttttata ctagataaaa attgaaaaaa
    25261 tccatatttc atggtagaat gagcataatt ttgaacaaga caagaaagga ttttcaatga
    25321 aaaaaatact agctcttgct ctagcttcga gcatcttgct aactgcctgc acaaacaact
    25381 cgacagctaa tagctcatct tctacagcat ctagctctag ttcaagctcg actacgacag
    25441 ctgatacaac tgcttctagc caatatgcca aagatttggc atacgccatt aacaatccca
    25501 aagctacatt ccctcaactt tctaatgaaa ttggtgaaaa tgaggctgct gttaaaataa
    25561 aaacaaccga aggcgatatc actataaaac tcttccccga gcaagctcca ctaactgtag
    25621 aaaactttct gactcatgcg aaggaaggat actataatgg aacgatcttc catcgtgtca
    25681 ttaaggattt catgattcaa ggtggcgatc ctcttggaaa tggtactggt ggagagtcta
    25741 tctgggccgg aaaagatact actatcgatg ctgggaatgg ttttaaagac gagatttcag
    25801 ctttccttta taacattcgt ggctcacttt ctatggcaaa tgctggcgcg ggaacaaatg
    25861 gaagtcagtt tttcatcaat caaaatacaa cagacatgtc tagccaactc tctagttcta
    25921 gctatcctgg taaaatcatt gacgcttata aaaacggagg caatccaaac ttagatggca
    25981 agcataccgt atttggtcaa gtcattgaag ggatggacat cgtggataaa atcgcttcag
    26041 tcgaaacaga cactagcgat aaacctaaaa cagatgttaa gattgagtca attgagatca
    26101 ttaaagacta cactaactag gtcagaccaa taaaaaatga aaacttgaga atttcctcaa
    26161 gttttcattt tttattacaa ttgctttcct tgttttccat tatataaacc cttgaatact
    26221 tgatagagga ttggtacagc aatgatggtc gtaattgcag tgccataggt tcctaagatt
    26281 ctacccaaag ctgcgaggaa ggaagctgag aaggttaacc ctccgacaaa acttcccgtt
    26341 aatgtatact tcaataggtt caagataatt tttgtaattg ccgcaacaat tccaaccaaa
    26401 ataatattgg ttaagcgatc attttccttg aggaatttct cgtaaaacaa atgcaaaatg
    26461 aagcagacga tgagcgattc taaaatggta atccaagcga ctgaagcata accagatagt
    26521 aaatcaaaga tgcctagacc aagtgacgcc gccgcagctc cttttttggc accaaagatt
    26581 agtactccta ccaccaccag agcattgcct aaatggacaa attgactccc aaaaggaata
    26641 cgaataaaga agacaaccac acaaataagg gctgcaaata ggctaatttc tgttaattga
    26701 cgcaattgat tctgtttcat aatttctcct ttaatgtttg aaatgcctgt tgtaattctg
    26761 ctagaaaagg ttcaaaggaa atcccaaatt tcaagtctct atccaaagca agggtacgct
    26821 ctaaactctt gtcgataaaa tctaaagcta gagggatagc ttgatgaaga ttgatttgtt
    26881 caatggttgc tacagccaac aaggtagata gaatgtcacc tgttccaaag aaatttgctg
    26941 gatatttttt agacatatag gtagttattt cccctgtttc ctgctgaaaa taggctacac
    27001 ctatttggct atcatcaaag gaaatccctg tcagtacaat atctgcagac acctgctctg
    27061 ctaaagcttc cagtaagtcc tcaatagccg ccctatcgta gcaagctccc aaataatccc
    27121 tccctgtcaa aaaagctgcc tctgttacat tgggaagaat gagcttggcc gactggatca
    27181 actctttcat ggcttctaca taggtagggg tgaaacctgt atacaacttc cctccatccc
    27241 ccatgaccgg atcaacaatc aatggtgtct ctgtttgttt cgcatacata gccaattgac
    27301 ttagttgctg aggatttcta cagtagccag acaagatacc tgccaattcc aaattcaagt
    27361 tcttccactg ttcaaaatag gctcgattca agtcagtcat atcttcaacg acaacatctg
    27421 gaaaaccacc cgtatgagaa gaaagtagta ccgttggtaa aagaatcgtt tctacctgac
    27481 aggctgctgc aattgggatg ctagtggcta gggcaacctt gcccacacca ggcaaatcat
    27541 ttgcaagcaa taatcgctga accataacaa cctcctaaat tatttttctt aaacaaaatt
    27601 gtaaagtatt ttcacgagct tttcaataac tcttatcaga aattgtatgg ggacagatgg
    27661 ctgaaacctt ataatatcgg gctcaaatta ctgcataaga aaaacagtaa caactttttg
    27721 ctactgtcat cctatttcaa tgtattgttg tcaaaatctg cttaattttt ctccagaaag
    27781 gcaatcaggg tctgggcaga acgttctcct gcttgaatga taaattcatc aaaggtgata
    27841 ttggcatctc cctgagctgt gtcactcatg gcacggataa ccaagaatgg cttacctgta
    27901 ttgacagctg cttgagcgat agctgctcct tccatctcta cggcaaggac ttctggaaaa
    27961 tgagttttga tcgtagcaat tctctcctga cctgcgataa aactgtcacc tgtcacaatc
    28021 agacccacat gactaatcat ttcctgctct gctaaaacgg ttcttagctg ttctaacaag
    28081 acttggtcgg ctggataata caattcctgc cctgccattt gcccgtaagc atagccgaaa
    28141 gccgtcacat ccacatcgtg gtaagccaat tgattcgcta caaccacatc accgatggca
    28201 ataccttcgg caacagctcc tgccgaacct gtattgacaa tgacatcaac cgaaaaacga
    28261 tctgccaaaa cagccacgga catagctgac ataaccttac cgatacctga ctgaacaaga
    28321 acaacttcat gttgaccgat tcgtccctga tagtaagttc gacccaagac atcggtttca
    28381 gttgcatctt gtagatgctc aaccaaaatc tttaattcct gaggcatggc tgcgataatt
    28441 ccaaatttca tctcttctcc taaataaata acactgcaat gataaacatt atcagtaaga
    28501 tgatgaccca aaaaaggatt ttgtttacct tactgcggaa agcttctcgc ttgatggttt
    28561 cgatacggcg actttttact acagtaggtt tgaccgggat tcggatcgtt tgtccctctt
    28621 catatccctg ataatcttct tctagatatg gatcgaatag agcatcatcc attgatatat
    28681 cctggtttgg acgatagtgt ccaaactggc tagattggtc ggaatactgt ttctttttca
    28741 ctttctctaa aatttcatcc gtcaacaagg gcttgcccat tgctagtttc ctactttctc
    28801 atgagttgta aatattggat agccatgatg gtctttgcat cacaaatatc gccagtagcc
    28861 accaagttca aagcctcttc caaggttacc tcatgtaatt cgataacctc atcttcatcc
    28921 attggacgag gattttcaac cttgataagg ttatctgcta aataaaggcg aattcgttca
    28981 ttacagaaac cgatggctga atagaaatct gccaacaagg tcagtttgtc actagtatag
    29041 cctgtttctt cttctaattc acgcaaagca gcatcttcaa gcgtatcttc ttcgcctagc
    29101 tccaatttcc ccgccggaat ttcataaata gtacgttcaa tggccttgcg gtattgtttg
    29161 accaaaatca ttttaccttc tggggtaacg gctaaaacgc aaactgctcc cttgtggaaa
    29221 atgagttcgc gcttaccagt tccaccattt ggcaaggcaa catcatctac tactacatca
    29281 aaaatgtgcc ctttaaaaat ttctgtccgc tcaatggttt tttcttcaaa attcatacga
    29341 ttacctattt ttgacttgga tggaacggaa aacgagtcgc ataaccttct ttgttttctt
    29401 gacgaccacg accaataccg atggcatcct ctggaatgtc ttttgtaatg acagaacctg
    29461 cagccaacaa ggcgttgtcc ccaatagtta ctggtgcgat gatggttgag ttagagccaa
    29521 caaaggcatt atctccaacg gttgttttaa atttattttt accgtcgtag ttgacagtga
    29581 tggtaccagc accaacgtta acattattgc caatcgttgc atttcctagg taagtcaaat
    29641 gaccagactt cgttccttga ccaagtgtag aggccttgat ttccacaaag tttccaacgt
    29701 gaacatcttt tttcaaaaga ctacctggac gaatatgggc gtatggtcct accgtcacac
    29761 cttcttcaat aacagattct tcaatatctg agttgctgat aactacatct gctgcaattt
    29821 tcgcatcacg cacacgagtt ccattggtta aaacagtacg ttcaccaatc accgtttgcc
    29881 ctttcaagac aacattagct tcgataacag cttctgcacc aatctcaaca tcaatatcaa
    29941 tataggtagc ttctgggttg ataaatgtca caccattgac catgtgtttt tcattgattc
    30001 gtttgcgcat aacagcttct gcagtcgcaa gagcgacgcg atcattgaca cccaaacttt
    30061 catcaaaatc acgcaataca taagcaccaa ccttctcgcc tgcctgacgg aaaatcgaaa
    30121 taacatctgt cagatagtat tcaccttggg cattgtccgt attaatatct ttaagcgctt
    30181 caaaaagacg tttattatca aacaagtagg ttcctgtatt gatttctttc acttgttttt
    30241 caaaatcgtt ggcatctttt tgctcaacaa ttttttgcac ttccccatca gcattgcgaa
    30301 taatccgacc atatccgaat gggttatcag tctgagctgt caagatagtc gcaacattct
    30361 tgtggctgac atggaagtta atgaggttct tcaagctttc tcctgtaatc agcggtgtat
    30421 ctcctgcgat aacaagggtc tgaccttcca aacctgcaag agctggctca gccatcataa
    30481 cggcgtggcc tgtccccaac tgttcagatt gaagggcaaa ctctgactga cctttgagaa
    30541 ctgcttggac caattctgcc ttgtgaccga caatcgttac tgttttagca ggttccatag
    30601 catctacagc ccgtttgaca tgctccaaca tggtaattcc tgccactttg tgtaagacct
    30661 ttggcaagtc cgacttcatg cgagttccct tacccgccgc taggataatt gcatagttat
    30721 tgctcatagt tttctctctt ttcaatgata tactcctatt atagcaaatt ttagtttttt
    30781 tggaaaatag cggaagtgtg ccaagtttta agtcaagcaa aaaggagcct gagctcctta
    30841 gaatattaaa tgaagacctc gtttaccatc ttctcttgct tgctccgtca gagctttaaa
    30901 ctcttcccaa acagggcgtt cttggtctgt aaaacggaga ttactgcctg gcaagctggc
    30961 attggatacc gcttgaacaa agcctgacaa aatggttgcc aaagccacac cgtccttact
    31021 ggccacatct tccttggtca caagcaaggc cgactgcaac ttccctgtct tctctttgcc
    31081 aatctcctcc tctttcccag ccagaatggg agaaagctgg tccaataact caatgacacg
    31141 ttttttatcc attgtaaact ccttggtttt attttcatat tattatacta taaaccaaag
    31201 gtgctaacaa gggaaaactt acattttagg gtaaaccagt tcaaattctt cacagacaac
    31261 cagcatatct tctgagaaag acaggcctgc ttcggccaac caaatcgtaa agagttcttc
    31321 atggacctgc cgccagtgag ccaaactttt ctcttttatg acagacaaat cgccttcctg
    31381 acggaactcg ccctccttat aggcatgttc ttccgtcact tggaaaaagg gtatcacata
    31441 gaccttggtt gtttggataa tgcaaacagc ctgaccttgt ccgtccagaa tgatgtcgta
    31501 gccaccagct ttggggattt cttctccctc tactgcgtag agggcatggg cagagctggt
    31561 tgaggttttt atacctctgg ctactaaatc aaccagtcga tcagcttctg ccccaaaagc
    31621 ccaggcctca ggctcaggac ctgctagggg attgacggca agaaaatctt gccagagttg
    31681 tgtaggggtc atagggggtc ctttctagaa atttgccaat tcttcgcttg atcaagtaaa
    31741 gcctcaaatc cataagggat ttgatttaga agtgtttcgg ttatcccaaa ctggagtatc
    31801 tcaactaaag caattaattg agcatctgca atgtcatgaa tatctccaca aagaaattgc
    31861 cacatcccat cttccaaatc gtgactgatg taggttatcg gtttattctc ttcacttatg
    31921 tgtttacaga ttactactgc tacatgagga ttatcatcaa agatcaacat cactttcctc
    31981 cctacttcaa actccagcca ccgtcgatgg tgataatctg gccctgcatg gaagcgagtt
    32041 taccagtagc caacatgaag gtcagctctg ctatttcgct gggctgactc cagcgtccga
    32101 taggggtctg gtctgccacc cagtccgcta ggccaccagg ctcaaagtcc ttctgggtca
    32161 tgcctgtctg aacggcacca ggagcaatgc cgaagacctg gaccttgtcc ttggcatagt
    32221 ccagtgccag ctgcttggta aaacctgcca aagcatgctt ggaggcggta taggctgagc
    32281 ctcctccacc tgctagactg gaggcaatgg agcacatatt gataatgatg cctgactgtc
    32341 tatccaccat ttgctgcaga tagggacggg tcagtctagt caccgcaaaa aaattgaccg
    32401 taaagatgcg agctaattca tcctcctcaa tatcgaggtg gggacggtaa tcgtctagta
    32461 tgcctgcggt gttacagagg acatcgactg tctggcacca tgaaaagacg ggcgataaat
    32521 cgcctgtcag gtccagctgt agaaagtgga aatcgcctgc caaatcaggc ttgctggcct
    32581 gatcaatccc gtacacacgc cagccatttt ccaaaaaaat ccctgcctgc gctagtccga
    32641 taccgctgga aactcctgtg atgagggctg tcttagtcat ggacttctac ccagtcggtc
    32701 gcaaggacgt cgcaaggggt cgggctccac atggaaaagc cctcgccctc tccggttacg
    32761 ttgatgagga aatagggcgt cgcctctagc ttctgcccgt ggacttcgat ggtgtcaaag
    32821 agctggacgt agttctccgc cccgccccag cctgtgcgaa cgtacttttt cttggccttc
    32881 aagcctggta aaatctcttc aaatgtcatt tgaaactcct tgttctttta tctttcaatc
    32941 attataccaa aaaatcagac tactctaaag agttgcctga ttgtatttct accccatatt
    33001 ctcctttttc aataggaaaa atgtgcctgt aagcgttgag aaaaaagcaa gaaccataaa
    33061 aagcagaggc aaccagcctg tccaatcctg cggtccgtag ccaaactgac tggcagtcac
    33121 ctgactaaaa ccactcagaa cagttagtag ataggccgga atcaaggtgt ctacaattgc
    33181 tgacttactg cgatagtaga agagaccagc tgcgattcct aaaatcacca aaagactggc
    33241 ccaaaagggt aggggaactc cttcataaaa ctgacggcta atccaaaaac gcagtccaac
    33301 tagccccaca aaactaaacc cccacgtccc catcaacaga taggacttga tttttgaccg
    33361 ttcatagact aggttcttta gaatgaaaaa tgcagagctg ggcaagatga gcgccagaag
    33421 caaatcgcac agcaagcccc gccattctag gaccatctca ccagtcactc caaacaaacc
    33481 taagaaaaac caactaatat agaccaagga aatcaatcct gttaaccgca gaccatagta
    33541 ccagcgaata ggcgacaggt cagacaagag ttcatccgcc atctgcttgc tgtctttgcc
    33601 taaaaaatcc tctgccgact gaccatctgc ttgagcctcc aagacatctt ggtagataga
    33661 aagcaagagt tcagtcgccc tttcctcctg ctcatgaaag gctgacgcca gtatcaagta
    33721 agcatggagc ttgcgcatat aggccttgtt ttccttggtc aacttcccct gtaagctgct
    33781 aatagcattc aaatttttct gttgcttgtt catcttactt ctcctttttc cataccaaca
    33841 accaaacacc tagccaacta gaaattgcag gaatgagcaa caatagtaag tttagccaaa
    33901 ctgggacggt catgaccata tgcaatacac cgccaacaat cagaaagaga taggtcggta
    33961 aaaagacata gcggaccaac ttttcctttt ggaaaaatag cagagctaaa ccgagaacgg
    34021 taagtggcac tgcaagcccc cagccagtca agactaggtc aggttcctcg gggattgccc
    34081 agagacgaag tccgcaaatc aggagaaaaa gaagggggat acagagaacg cttgcccaaa
    34141 ccttgatttt gctggtctgg taaatcaaac cgcgaatgat gaggaaaatc cctgctggca
    34201 ggaggaaact gaggaccgtg tcacacacca agtccagcca gttgagggaa atggtgctcg
    34261 tccctgcaaa atccatcagc cattggctgc caaggtaaat gatgagcatg aggccactca
    34321 ggtttgcgac ttccatgaaa ccaatcggag ggaggtagct gagtaggtcg tccgccattt
    34381 gcttgctgtc tttgcccaga aaatcctccg ccgaaagccc gtctttttga gcttcaagaa
    34441 catcttggta gatgcttaag agctgagcag tcactgcttc ttcttgtttg tgaaaaactg
    34501 aggcaatcat catgtagcca ttgatacggc ccatgtattc cttgttttcc ttggtcagct
    34561 ggctttcaat cacttcaatc tgcttgcggt attccatttg tttgctcatc ttacttctcc
    34621 cttcactttc tccacttttt cgacgagttc tccccattgg acccagaaat cgtttacgta
    34681 gctctgccct tggtctgtca aataaaaata cttcctgtcg ggtccatctg gcgagggctt
    34741 gttctgacta aaaatcaggt catttttttc taacttctga aggaggggat aaactgtccc
    34801 tccgaccatg ttttcaaagc cctgatttct caattcctga accagctcat aaccataaat
    34861 ctccttctga ctgataattt gtaagacaca gccgtctagg acacctttga gcatttgggt
    34921 ttctttcata agtcctcctc ttcctctgca aaaaatccaa acatcaagcc tgacgctaac
    34981 aggatgccta agatcaaaat agaatccaag gcccagccag ttataatggt cgtcacaagc
    35041 gtgatacctg ctagttccct atcttctcgc ctcatctttt ccaatttcat ctttcgtctt
    35101 atctagtttg taataccgac tagtttgata aaaataaaag tgattttctt tgtcttctat
    35161 cactagtttc ttttacctat tagctttgta tctatagtct aacacaaggt agctagtttg
    35221 taaaacaaaa tagtgaaaaa tattcaaaaa aattaaaaac ttgggttgcc ccaagtttac
    35281 gaaataatct gtttataaga ccgtgtagtg atggcataaa ccaaaaggta cagtagaaga
    35341 tagccaccac agatacctgc tgttaccaga agcataagcc ctgcattaac cacgccgata
    35401 gacaacaaga tagacgagag catcttgtag gcaaaggcta gatgaacaaa ggcaagtagg
    35461 ataggcagga agaaaactgt cagcaattgc ttgcgaatgg actgtctcgt ctgatcctca
    35521 tccagaccaa ccttggtcat aatgacgaag cgatctctgt cttcatagcc ttctgaaatc
    35581 tgtttgaaat aaatcaccag caccaccgcc atcaaaaaga tgagtgatag caagagcccg
    35641 atgaagaaaa gtgaacctgc aaaactgaag aaactacgca tcgcataggc acggtaggcg
    35701 agactaatcg agttggtccc atctggaaga atattagagc tccacagttc gctttcaaaa
    35761 gtactggata agaagatctc ctggctatct acctgttctt cttctgatag actgctttca
    35821 aagcccatat aatagcgatt ctcagcttga ttttcaaaga cagccaggtc ttgaacaaca
    35881 atgaccagat actgactgag aaggaaggaa ccatggtcag gcagatgtcc taaagtcaca
    35941 ttcttgggca agacttgggc aacttccatc tccttttcat caaaggtgag ggtttgacca
    36001 gcttgatact ggactccctt actataaatt gccacttggt cagatgccaa ctggagtttt
    36061 tctcccgtca tcttttcata gctggcttga tcaaggacaa aaccgatccc aactcggtca
    36121 gagaaatcca taccagcggc ttcttcattc gtcaaaaatc ttacttgctg gtttgtcacc
    36181 tcagaaaaat aggcttgctg gtaaggatag cccaccttac tttcaatagg aatatccttc
    36241 tcttctaaga tagcatccgc ccactcctcc cacttctccg tttgctcttt tgaagtgctt
    36301 ggttgcattc caacatcaat cgaaaagtca tttggatttt gattggcaat ataatccttg
    36361 ccaccgatgt aaatattgag ccctccaacc atggtcacca agaacatgct agagaggatg
    36421 gtaatggtcg caagacccag agcatttttc cgcatacgga aaatcaagtt ggatacagaa
    36481 atgaaattct ctggcttgta gtaataggtc tgacgctgtt ttagccagtt taagagactg
    36541 ataacacctg cgtggaagag caggtaggtc ccaaggataa ccagaagagt tgctccaaag
    36601 aaacttggaa tagcctgcat cggactggtc actagttgag caatagcata gcctgccccc
    36661 aataagataa gagctaagag ggtttgtagc cagaggaagc tcgttttctt atcccctctc
    36721 ttcttacctt gaaccagttt gagagagtcg gtcaagccca gtttcccaat attaaagagg
    36781 ctaaccaagg cgaaaatccc aaagagataa ataagtacag tgactagact tttcaactgg
    36841 aaggttgaag ccaagaccac aggcatctgc atggctttca gcaagagcgc atagaagagt
    36901 ttatctagag ccaagccaag caacaagcct gtcaaaatac tactggctgc aaaaactaga
    36961 ttttctagaa aagtcatcag gaggaggtgt tttttctcca agcccagaat actataaaca
    37021 ccgaactctt ttgaccgttg cttcatgaca aaactattgg catagaagac catgatggca
    37081 accgccaaca tgaccacaat cataccaaag cccaatacca tggttacccc atcggctccc
    37141 ttgacctgac ctaaatcagg atgaaaggca agcgaggcaa aaatataggc aatggctgtt
    37201 gaaactatag tcatcagggc atagggaaaa tagagcctgc ggttcttttt gagattggtt
    37261 aagcacaatc gaaaggttag tccaaacata ctactcacct cgattcgcca tgactgtcaa
    37321 ggtatctgaa atcaactgat acatttcctg actgcttctc tcacctcggt agatttgatt
    37381 gtatagaata ccgtccttga tgaagagaac ccgtttggca cgactggctg ccgcagtcga
    37441 gtgggttacc atcaaaatgg tttgcccctg ctggtttatc tgctcaaaga tatccagcaa
    37501 ggttgcagag gacttagaat ctagggcccc agtcggctca tccgctaaga ggatttctgg
    37561 ctgagtaatg atggcacgcg ccaccgcaac tcgctgctgc tgaccacccg aaatctcgta
    37621 gggcatcttg tcttgcaagg tcgcaattcc caggctatta agcgtatgaa tgagtcgctt
    37681 gttcatctca tcaatcggaa aacgagacaa aaccagaggc aaaagcacat tgtccttgac
    37741 agaaagagta tccaagagat tgaaatcttg gaagacaaag cccaatttct cccgacgaaa
    37801 ggctgccgct tccttgctct tgatagattg ggtatccaat ccgttaagca agaccttgcc
    37861 ctgcgttggc ttatcaaggg tcgccaaaat attgagcaag gtggacttac cagaacccga
    37921 ctcacccata atggcgacat attcaccctt ttccactgta aagtgaatat ccttcaaagc
    37981 ctcaacctgt cccgccttaa agagagaact gtatatcttt tgaacgtgtt gaacatctaa
    38041 aactgacata acttgactcc ttttcttttt ctaccctcat tctagctcat cctccgacag
    38101 tctgccatag ccctagcttt catttgcgtg acaattttgt aagattaatc aaaaatcaac
    38161 tccacttctt tgataccgat acgcacttct gttccccgac ccacttttga ttttagcttt
    38221 agggaatagc ccagctccgc agcaattttc cgtgagagat agagccccag ccccgaagat
    38281 tgctgggttc tgcgaccatt gaaacctgag aaaccacgct caaagacccg ttccaagtca
    38341 ctctcagcaa tcccaattcc cgtatcgcga atgaccaact catccccatc tagaaaaatc
    38401 gagatggttc cttcctgaca atacttgagg gcattggata aaatttgctc aatcaagaga
    38461 cccagccaac gtttgtctgt ctttacgagc ctatccagct gccccaagtc caagctggta
    38521 ttggcctgaa tgaaaaatat ggaatatttc ttgaccagac ttctgaccaa ctcttccaaa
    38581 ttaacagatt cgataaccaa atcatcatga aaggactgta aacggagata gttcaagacc
    38641 agacctgtgt attgttctat cttgaacaat tccgattcta attggtgacg aactggacta
    38701 ctatctactt ccttaaccaa gagctgactg gctgcaattg gtgttttcat ctggtgggcc
    38761 caaagggtgt agtagtcgtc taattctgtc tgttcctgtc gctgtttttc taggatttgc
    38821 ttgttctgga cttctagtcg ctccactttt tcctgcaaca aacgctcact agctgtccca
    38881 atagccactt tctgaccacg ccagattttt ccaaagcggg aaaattccct gacaaaatcc
    38941 cagaggaggg cgaggagcca gcagatagtg agcagggtga gggcgtagaa aaccaagttt
    39001 ctttggatgt caaagaggct actataagcc agaatggtcg tggcaaaaag acagtagctg
    39061 accagaaata gccaacgatg acggagccaa gaagttagaa aatcaggcaa catttcctta
    39121 ttcatgtgtc cacaccaggc cgtagcctac tcctttcttg gtcgcaatca catctggcag
    39181 acccagctct gccaattttt tacgcaggcg tgcaatgttt accgacaggg tattgtcatc
    39241 cacaaaaata tcactgttcc aaagttctct catcagctcc tcacggctga ccacttcctt
    39301 gccatgttca aaaagcaccc gtaaaatctg aaattcattt cgggtcaatt cctctacatc
    39361 ctgtttatag gacacctgca tggtcttcaa gtccaaggaa acttcttcaa accagagcaa
    39421 actttgttcg ccgacaaagt cataggttct tctgagaagc ccctgtattt tggccaggag
    39481 aaccgtcatt tcaaagggct tggtcacata gtcatccgcc cccatattga tcgccataac
    39541 aatatccatt ggctggtcat gggaagacag aaacataata ggcacacggg atgtcttgcg
    39601 aatttcctga caccagtaat agccattgaa aaacggcaga ccaatatcca gcaaaatcaa
    39661 atggggctga aactcttcca tctgttccaa aaccatctga aaatccttga cctcttgcac
    39721 ctgataaccc cagtttatca agtttttagc aactagttgg ctaattgttt tatcgtcctc
    39781 gataactaaa atcttttgca tcgctctctc cctttttcat atatactata tattatagcc
    39841 tataaatcac aaaatggtcc gatttttcta acaaacaatc tcaaactaag atttgtcatt
    39901 ccacacatat ttcgctatac tagaaaaaag aaaggattgc tatgccgaat ttattaacct
    39961 atatcgaaga aactcaatac gataattttt atgataaacc tatcaataag ctagatattc
    40021 tggctctgac cgaactttcc tacctccctt ttgataatct ggtcccctac tcttttacag
    40081 aaaatggtgt acgacttgat cggttggcag cgacctttga agagacctac aaaaataatt
    40141 tccctccctt ttctatggtg accaaaaacc gcctagcctt actaggactt ctagccaaat
    40201 ccaaacgctt caaatctatc aaggcatttg gcttcgttga cgattatcag ttggaacagg
    40261 aaaagcagtt ttcagcaatt agttatcgca ttgaccgaaa aacgattgtg acttgcttca
    40321 gagggacaga tgatactatt atcggttgga aggaagattt ccacatgacc tatatggatg
    40381 aaattcctgc ccaacgttct gcaaatgcct atctagaaaa gctgatggct agtcaaaatg
    40441 gaaatttcta tatcgctggg cattcaaaag gtggaaattt agccctctat gcagcatgcc
    40501 agcaagctac agaccaacag gatagaattc tagctatcta tccctttgat tcacctggct
    40561 tacacaaaaa acacttggaa gcacctagtt accaagctat tcaccaacgg attttccctg
    40621 tcattcccca gaattcaatc gtcggtatga tgttagaaac accagaaaat gctcagattg
    40681 ttcagagtaa tacactcggc attctacaac acatcagttt ttcttgggag gttgacggaa
    40741 gcgacttcaa actagcccct gccctgacca gcgatagcct acaaacagac caagccttaa
    40801 aaacttggac ggctagtcta acagacgatg aattacgaga cttcttcgat ttgtttttcg
    40861 gcatcttcat caaagcagga attgaacgtt tcagcgacat aactgtcaat ccgctccaaa
    40921 aattacagga aatggaccga ttaaggaaag aattttctcc tcaagaagct gaaatggtgg
    40981 acaaactcat tcggctcctc tttgataccc gttatcaaat ctggaggaac aatattccaa
    41041 gccctgaaat ctctctacca gattggcgga aacttttcca aagaaataca actgaaaata
    41101 aagaaaacta gctcaggtga ctgaactagt ttttgttatc aaatcttctt aaaaactggg
    41161 ataatttttc taatcctttg attagagttt cttgttcaca ggcatagccc agacggacat
    41221 agccgtcacg atcaaaccga ttgccaggaa ctagaagaac accgtattcc tgcagaagtt
    41281 tcaagcaaaa atcttccatg ggcatatcca ctgcaatttt tacaaagctg gtagaaacaa
    41341 ccgctggtcg aatataggaa acgaggggtt ccttctcaat ccatttttcc aaaatagcta
    41401 aattttcttc taaaatacgc cgatttcttt tcaaaatctc tttacgagat gccagagcga
    41461 gttgggccac catgtcatca aagacacctg cacaaatcat ggtgtagtcc cgataatctc
    41521 tcaaaatatc ggttacctga tgattggctg ccacccagcc tacacgaata cctggcagag
    41581 aataggtctt agacagacta ttaaccgcaa tacccttgtc atagacttca atgatagatg
    41641 gcacatccag tccagaaaag gaacgataga cctcatctga taggatgtag gctcctacct
    41701 catcagcaat tgctgctaac tcctccaaat aagccctatc cataactgca ccagttggat
    41761 tattggcatt gttgatgcaa atcatcttag tgtttggacg aatgagctga cgcagttttt
    41821 ccaagtctgg caaccagcca tgctcttcct caatctgcca caaatccact tccgctccca
    41881 aagactttgg aatatcgtag agttgttggt aggttgggta gagagaaatg acatggtccc
    41941 ctggctcaat caaactataa agaactaaca agtttgcccc tgttgccccg ttggtctgga
    42001 gaatttgttc tggcttgacg cctgtataga gttgactaac cgaattttta aatgctggcg
    42061 aaccttctat ccagccatag ttgagcttgg taccctgtaa tttcttataa aaatcctcag
    42121 gattggtgcc cgacaaggca aatagttcct ccaaagtcaa tgaagaaatg gacacccctg
    42181 ctatatcata aatcgcgcta ttttcatgga cgttcagcca ttcctcaacg ccaaaacgtg
    42241 gtaatttcat cagtcttcct acttcaattt attctgtcac tattgtacca cattctcaca
    42301 ataattgtat aaatatgcga tatatcataa aaggaatatt tttacaattg aaaaagcaga
    42361 ctttctcaaa cgagactgtc tgcttctctt tttcccctct taaaacttcc ctaaattcgt
    42421 caagtctttt ttgtctggca tgacttcctt gttgtcccaa cgctcgacaa tcttaccatc
    42481 tttgaggcgg tagatgtcaa agtgggcgta gtcctgacct gcaatccaga ctttcgaata
    42541 agccaccaca tagtcaccct gtcccatcac cttgaagaca aagtcgtagt taacagcctt
    42601 atcgaccaga tagtttttat aggccgcacc gccttgggca atctcttggt tgtgctgaat
    42661 caggtctgcc gccacatagt cgttaaactt ctcgatttcc ccattttgaa ggacatcgac
    42721 caagaaacga cggacgattt tcttgttgtc ctcggtctta tctaggtcag tcagctcaaa
    42781 gtctgcgtaa attggttctg tttcaccaat gttttttgga taggcatcaa taacatccca
    42841 atgctcaacg atacgaccat tttcatccga acggaagatg tccgccgtca cccactctgc
    42901 ctcaccgtca ttgagtttct ggtggacatg gacgaagaca aagtttccgt cttcaatggc
    42961 acgaacaatg ctgatttccc gcttgggatt gcgtttgaaa aagtcctcaa agaaagccgc
    43021 aaagccctct ttttcatctg gtacacctgt actatgctgg gtgtagctga ctcccatata
    43081 gttttcatgc acttccttga tttccccgtc gcgaatacca cggaggtaga gatttttagc
    43141 attttctagt tgatttgaca tgattttctc ctattttagt agattttctt tctcaaggta
    43201 ttccctcgcc acttgctctg ccgacttgcc ttccacatcg accgcatagt tcatctgagt
    43261 catttcctcg gtcgatattt tgcccgccaa agcccctagg acttgctcca actcaggata
    43321 gttctctaag gtttctttgg tcaatagcgg agcggcctga tagggtggga agagctcttt
    43381 gtcgtcttcc aggattttca gcttgtaaga aacaatcttg ctatccgttg agtaggcatc
    43441 aactagctgc acatctccat ttttaatagc ttcgtagcga agggcaggct ccatggtttt
    43501 gacattgaga ttgagcccat aaagattggt cagaccgata ttcccgtcct cacggtcatt
    43561 aaactccaaa gagaagcctg cgacagctgt ctgctgcact tttaccaaat ccgaaatctt
    43621 ttcaagacca tgatcttgag catagtcttc tgtcacagcc aaagcatagg tattctggaa
    43681 agccattggt gctaaataca tcagaccatc ctgttccaaa atcgcttctt ttgcgtaggt
    43741 ataaacctcc tcaggattgt tggacaaatc agacggtgga ctagtcaaaa gagtggtcgt
    43801 aatggtacca gtgtactcag ggtaaatatc aatcgagcct gacttgaggg cttcatagag
    43861 gaagctggtc ttgccaaagt ttggctcgat ttctacctcg atatcggtct ggtcttcaat
    43921 caggagcttg tacatattga taagaatttc aggctctgcc cctagtttac cagcgatgac
    43981 tagctttttc gatgaagact ggttgagcgg aacatagcta gctccgactg ccaaaagtgt
    44041 cactaagaga gctgccagaa tagtacgagg tttcttgtcc tgcaagaact tgatgaccga
    44101 gccaaagagg acagccaaga ctgccgacga caccgcccca atcaaaatca gggccgaatc
    44161 attgcggtca attcccaaga ggataaaaga gcccaaaccg cccgcaccga ccaaggcagc
    44221 aagcgttgcc gtcccaataa tcataatgga cgccgtccga ataccagaca tgagaatagg
    44281 catggccaga gccaactgaa acttacgcag tttttccagc ttggtcattc caaaggctgt
    44341 cgcagcctct tccagcgagg aatcgatttc tgaaagtccg gtcaacgtcc cctgcaaaat
    44401 gggaaaaatg gcgtagatga ctaaagccac caccgcaggt agcgttccga tacccataaa
    44461 aggaatgaag agccccagca gtgccaagga gggaatggtc tggaaaacgc ctgtcacctg
    44521 caagctccac tcggtcagct ttttcttgtt agacaagacc aagcccagcg gcaccgcaat
    44581 ggcaatcgca ataatcaaag ctagaaggga gatgcgaagg tgttcaaaaa gagcaattcc
    44641 ccactcgtcc ttgcgttcta taaaggtttc aaataggttc attacatacc tcctcgagct
    44701 ctgataaatt ccttgacaaa atcattggca ggatgattcc tcaattcatc aggacttcct
    44761 aattgcacaa cttgtccatc ttgcatgaga cagatgcgat ccgccaattt aaccgcctca
    44821 tccatatcat gggtaacgaa aaccgttgtc atcttgaatt cctcatgtaa ttccttaatc
    44881 aagtcctgca actgagcctt actgattgga tccagagctg agaaaggttc gtccatgagt
    44941 aacactttcg gattggcaat gatggcccgc agaatcccaa tccgctgttt ttctccacca
    45001 gacaagtcct tgggcaagcg gtccaaatag ctgtccggct ccaaacccac cttggtcaag
    45061 agttgtctgg attttttcaa ggtttcttcc ttgttcaatc ccttcatctc aggaatgaga
    45121 gcgatatttt cagccactgt catatttgga aataaagcaa tctgttgcag gacgtagcca
    45181 gtttccaagc gtagctcacg caggtcaaag tctttcagcc gcttgccctg aatccgaata
    45241 tctccatctg tctgctcaat caggcggtta atcagtttca acgtcgttgt ttttccgcta
    45301 ccgcttggcc caatcaggac aaagaattct ccctcttgga tgtcaaaggt caaatttttc
    45361 aagattggcc cgttgacctg acaggtcaag gacacatttt ggtactcaat cattcgtttc
    45421 tcctcctaag atttccgtca aggcctgtcc atagcgacca aagaggtcta gtaactgctc
    45481 ctgttcttcc aagctgaact gggacagggc tgttttttcc gcctcttcca aggggtccaa
    45541 aatccgactg gcatagacac gaccttcctc ggtcaatttg accttcttat gccgtttgtc
    45601 tgctggattt tcctcaaaaa agacatagcc tttgtccaga aatttcttaa tggtggcatt
    45661 gaccacctgc ttactagagt aagtcttctt actgatccaa ttctgcgtca cacctctgga
    45721 tatataataa ataaacatca aaatggataa ggacttgctg tttagcccat gcctccttgc
    45781 atagtcctca tatagaccat cctgattgta aaaaatccga gcaagtatct tactccgctg
    45841 tctcaattct gtcatcatct tcctccctat tcagcacaat caccttgcca aaagcctctg
    45901 gtctactagt gttcaaaaca acaacaattt tcacaacgac ttcctcctgt aatcatgtta
    45961 gtcaatattt tttactattt taccaaaaaa agaaaaatag tcaatcattt tgactatttt
    46021 gaaacgtcaa ctaccttatt atagattccc gtcttcatcc attcaaacat attaaatccc
    46081 taaaattatc tgcttttaat ttacacaaaa caaatgataa tcagataaca aaactagcct
    46141 agaaaattct aagctagttt cattttatcc ttcaactgtt tctgaggcag tttcgcttgc
    46201 tacttctgaa acagtttctg ataccacttc agtttgaaca tcttcgatat caatttcaat
    46261 atcttcagac acaactacag catcctcaat atcttcttct gtcaaatcca ctgtcggagc
    46321 ttttgcagtt tttgccttga tagcttccaa aatgtcagcc gttgacaagt tttgttccgc
    46381 aattttttcc ttgatttgct caaaggtttc caaggatttt tccttaccag acttgaccaa
    46441 atcttctact gtcaattcac cagtttcaag ttgagttttt acttcggtaa atcgttcagt
    46501 cgcttgtttg cctaaatctt gtgccttagt gacaaaatca gcattgattt cttcatggtt
    46561 ttctttatag tcattagcaa agtttacaac tttttctttg actgttttac cagttttact
    46621 tgctagaaaa gcagctgcag cagctcctcc tgctgcccct aacaaaaggc tagtccacac
    46681 gctactagat ttttttacca tttttttctc ctttcttacc taagagagat gagagagttg
    46741 acagagctga aagagctccg ccagctttta cagtacttgc tccagcagac ttagctttga
    46801 ctgtcaaatc acgcgctgaa gcattcaaat cagatacaga agttgacaag tcagctaccg
    46861 ctacaaagag gggatccaag gtcgaaacct taccattgac atcttccacc agaacattgg
    46921 ttttagccaa aagctcgttg gtctgataga gagtcacatt gacatcgctg gtcaagacct
    46981 taagcgtttg ctgggcttca tccgttaccg tacccaattt tttcaacaac aaaacaatat
    47041 atactgccac cgccgcgatg gacaaggcaa taatcaagac agaaatttca ataatcatat
    47101 cttctccttt agggttgata gaatggaata gaagactttc ttctccgcaa aacaaccatg
    47161 acaataccaa cgaggattaa caccccagat agccattgtg aaacacgtat tcccaagaac
    47221 atgaggctgt ccgtccgcaa gccttctatc aaaaggcgac cacaaccata ccagactagg
    47281 tagaaagctg caatttctcc ctgtttaagg aattttggcc gtctacgtaa cacacaaacc
    47341 aagccaaagc ctagcaaatt ccagagagac tcaaacaaga aggttggttg acggtaggca
    47401 ccatcaatat acatctggtc tcggataaag gctggcaggt agttcaaact ttctactgct
    47461 ttaccatagg cctcttggtt aaagaaattt ccccaacgac ctattgcctg agcaatcatg
    47521 accgatggcg ctacaatatc caaaaaatcc agggtattaa taaagcgata ctgggtaaag
    47581 aaataaagga cgattgcacc tgtaatcaaa ccaccataga tggcaatacc accgttccag
    47641 atagcaaaga tagataaaat gttatcctta tattcactcc atgaaaaggc gacgtagtaa
    47701 atccgtgccc ctataataga aagcggaaat gcgattagga taaaatctaa aatatcatcc
    47761 tgacgaattt tctttcgcgg accctctttt gtcgccagat aaacacctag aatcagacca
    47821 agcaaaatgc agattgcata ccaacgaatt tctaagggcc ctaatttaat tgcaatagga
    47881 tccatattaa gcctcttctc tattgtgttc aattaaatta gacaagcgtt cttcgaagat
    47941 cttcgttgca tcaaacccca tctgtttggc acggtagttc atggctgctg cttcaattac
    48001 gacagaaata tttcgaccgg tttttacagg aatacgtatt tgtggaatag caattcctgc
    48061 tatttcgata gtatcgcctg aatttcccaa acggtcaaat accttacctg tttcaaaatt
    48121 ttcaagatag acagctaatt gcacttctga tgaatctttc acggcactag caccgtatag
    48181 actcatgatg tcgataatgc cgactcctcg aatctctaat aagtgtcgca gaatttccgc
    48241 aggttcaccc cagagagtga catcgtcttt tgcatagaca tcaacacggt catcagccac
    48301 caatcggtgt cctcgtttaa ccaactcaag accagtctca ctcttaccga taccagaatc
    48361 accctggata agcactccca taccgtaaat atccatcaag acaccgtgta cactcgtccg
    48421 ctgagccagg cgactatcca agtaagaaga caattctccc gatagacgac tggttgctgt
    48481 cttgcttcgg cagatagcaa tttgtttttc ttttgcagcc ttgtacatct cctcagggat
    48541 ttccaagcca cgtgccacta tgacaacagg ggtttctggc tggaacatct gagaaagaac
    48601 ctgatagcgg ttatgggcag tcatggccat caaataagac cactccttca tccccatcaa
    48661 ctggatgcgc tctggagcat agtaatcaaa atagccagtc atttccaatc ctggtcgggt
    48721 aatatctgcc gtcgtaattt gcttttgcag gagctcttcc gtactgtaag cacattcaat
    48781 ccgcagatta tcgaccaaat cttttacata aacagtcatt tcttccctca ctttcagttt
    48841 tattatatta taccataagc taggggttgg tggaaaaaca agtggctgat ttggtaaaaa
    48901 gaatgagttt cttccttttt ctcacaaaat tagcaaaact tccacagatt aaatgcactt
    48961 ctcttccatt gctacatatt tttgacaaat ctgttatact atatatagat taatacttac
    49021 tattaaggag aacatcatgg aacccttgtt tctcacacct gttatgcacg aaaaaatttg
    49081 ggggggcaat cgcctaagga ccaactacca ctacgacatt cctagtgata agactggtga
    49141 atgctgggct atttctgccc atccaaatgg cgtaactact gtctcaaacg gtcaatttaa
    49201 aggaagagga ctggatgacc tctataagaa tgaaaaacat ttatttggca atccaacaga
    49261 tgatgtcttt ccattgttaa caaaaatcct tgatgcagac gattggctta gcgtccaagt
    49321 ccatcccgat gatagctatg gcttagctca cgaaggggaa ctgggcaaga cagaatgttg
    49381 gtacatttta gaagccgagg aaggcgctga aatcatttat ggtcacaatg cccaatccaa
    49441 agaagaactc cgtcagcaaa tcgaagccgg agattgggac aagttgttaa cccatgtacc
    49501 cgtcaaaaag ggtgatttct tctttgtacc aagcggcacc atgcacgcca tcggtaaggg
    49561 tatcatgatt ttagaaaccc aacaatctag tgatacaacc taccgtgtct atgattttga
    49621 ccgccgtgac gatgcaggca acctccgtga actacacatt gagaaatcga ttgatgtact
    49681 gaccatcgga cctgttgcta actcaacacc tgcccacctc aaagcaggca atcttgactc
    49741 gacacttctg gttgccaatc ccttctttac cgtatataaa tggaatatcc aacaagaaat
    49801 caaaatggaa cagacagttc cttacctgct tgtcagtgtc atcgaagggg aaggtgccat
    49861 ccaagtcggt gaaaccagct acccacttca aaaaggaagc cactttatct taccagccga
    49921 tgtgacagac tggaccttta caggccaaat ggacatcatc gcaagccacg cgaactaaaa
    49981 aataaatgaa aaccgttaga atactgccct aacggtttta tttttttatg atagtccatt
    50041 ctgactgaca atcattctaa accactctcc tgatttttta atggtcttca cctgtgtatg
    50101 gatatctgtt gcaatcagac cataacgatt ccgataagca tttgaccaag accaacaatc
    50161 aatcggcgtc cacatatgat agccaaaaca attacttcct tcttcaatac catggtgtaa
    50221 gcattctaga tgatctcgga taaagtctat ccgatagtca tcttgtactt gaccattctc
    50281 atctaaaaaa cgttcttcat gagaaatacc cataccattc tctgagacaa accatggaat
    50341 attattataa tggtcacgaa tagtgattgc aatatcatac agtgcttctg gataaatttc
    50401 ccaaccacga tccaaattca ttctacgccc aggtaatgca taactatcaa agtatcgttc
    50461 aggcttccag tcgcctactg aacttggaga aatagctgga gcttgaaccc gatttgggtg
    50521 atagaaattt acccccaaaa aatcgatagt attgtctctt aatatttggt catcacctgg
    50581 ttccgtcttc caaatgactt tatctcttga taatatgtca actaattcct ctggaaaatg
    50641 cccatggatg gctggttcaa gaaacaattt attattccac aattcagcaa tccgtgctgc
    50701 ttccaaatct gctggtgctt gtgaggctgg ataagtcgga gtcaagttta gaacaattcc
    50761 aatacgacct ccttcttcat caagacctaa ttcacgatat tttgcaattg ctagtgccga
    50821 agcaagattc aaatggtaag cgacttgtac agcttttttt ccatcaacta gttttggata
    50881 gtgaaactgt tgcagatatt gacctaacac aacaacaatt ggctcattat gagttgtcca
    50941 atcctttact cgatcaccaa agagtttgaa tgcttgttca gcaaaaccaa caaacaggtc
    51001 aacaacacgt cgagattccc aacctccata tttatgatac aattctgctg gtagatcaaa
    51061 gtgatgcaat gttacaattg gtctaatccc attttcaata aaacagtcaa acacctgatt
    51121 ataaaactca acagcagcct gattgacagt attggtttcc aaatcatcaa tcagacgagt
    51181 ccactgaata gacgttcgaa cactattaag tccaacttct ctcatcattg caatatcttc
    51241 acggaaactg ttgtagaaat tcgaggttac atctggacca acaccttcgt aaaaagcttc
    51301 tggctcaata tcataccaat aatcaaaaac attcttgtgt ttcttataaa aacgtccctc
    51361 actttgcgga cctgaagttg cagcccccca ccaaaaatta gttggaaatt ttttcattat
    51421 ttactccttt ttacatacca tatctttcga caaaatgcga tgctgctcca agcaaattgg
    51481 catcatttct aaattcacaa gcctcaatac gataggttaa atcctccatc ttcgttttca
    51541 ctagtaaggc atccaatcgt tgctggattt gttcaatcag gtctgttcta gctgaaattc
    51601 cacctccaat cactactaat tctggatttg tagccaccaa cacattgtag atgcctattg
    51661 ccaggtaatc atatatttct gttattacct ctagagccct cttgtcacca aattcagcaa
    51721 gagtaaataa ctcttttcct gaaaaggaat ctgggtaacc atactgttga gcaaataatc
    51781 ttgctcgacg aactggactc actaacttgc tcatacttaa cccatctttt aaaatcatac
    51841 aaccaaattc tccaccgaat tggccttctc ctcttagaag ctgccgtcct tgtactatag
    51901 cacctccaac acccgtacca atgataaaaa agatagatga ggtcgcattt tgtgctaccc
    51961 ccagatttaa ttcagctaag gcagcacagt ttgcatcatt ttcaattgtc acaggtagtt
    52021 ccaataatgc actcaactca tcttgaatcg gaaaacgatg aatataggga atggcacttc
    52081 tgccgtaaat aatccccttt ttagtatcaa ctgctcccgg acaagataat gcaactcctt
    52141 tcagtcctct ataggaaaaa tggtccttta gatttagtat ggttgacttc atttcttccc
    52201 aagtggttgg tgtccgaaat gaagatttat taaagagtct tcctttatca taaagaccaa
    52261 atttgactgt tgttcctccc aaatcacata ctaataatgt catattcttc ttctttctat
    52321 ttctcattga agaatatcca caaaatccat tcaatacatg atagaaaaaa gcctgagata
    52381 ctttcaagct tttatcctat tgacaaccta cctatcccac ttcaactttg cattttcatc
    52441 tctatacttc ttaggtgtca ctccagttgc atctctaaat tgttggatga aatgactttg
    52501 tgaggaaaaa gaaaggtggt ttgcaatttc aatcatggac atttctccat atttcagcaa
    52561 ttcctttgca gattcaattt ttaaatctcg aatataagta ctaattgaga cacctacctc
    52621 ttttttaaaa agacgagata agtaactcga tgatactcct agttcatctg caatggcatc
    52681 aactgtaatc cgttctgtta gatttttata aatatgctcc ttacatgcat tgacatgttt
    52741 tgaattggta tcattttgat ggtatcgtcg catcttttct gtatagtgca acaccatttc
    52801 atcatgcaaa ctttgcactt cttgtacggt gtgaattgta tctaatttct gaatataaaa
    52861 gtcactcatg cgatacgctt gctctaactc caatccattt tgtccacaaa atcgagtaat
    52921 catcgctgtt gtaatcacaa aatgatactt aatattcgta acagggttct tagataatac
    52981 acctacacca tccgtctcta aaaaacgttg ttgttcacaa ttcattcgaa ccgcatcaag
    53041 atctcctttt gctaccgcac ggtaaaaaca gaattcttcc gccggttctc gatgattcat
    53101 ttcattgaaa tcatcatcca tcgaaacttg taaaaatacc ctcttctttt ccatactcat
    53161 tctccactcg attatttaag gaatgcttta cgctttcatt atatcatttt ttgctttgga
    53221 agaacaagtt gaaatttaca tgcatattta cggtaaatag gaaatttgct gatattcagc
    53281 tacaagaggt attgccctat cataaggacc taaccattca tctacacccg ttccaggcca
    53341 tacattcatc ataattttgc ttggtgtact tggaatatct tcagttactg tatgaacagg
    53401 ctctccatct acaaaccagg tgataaaatc attacgccat tcaaatccat aggtgtgaaa
    53461 cgcctcacta gcatcaaaac caagatcata tagatattca tgatttccta caccattgat
    53521 gaagtaatta aattgaacct ttgttgtatc ataccctaaa aattcaatat caatttcatc
    53581 ccattgtgtt ccatcgcttg gaccagtgta agtaaaaaat gaagaaacga caccagtatt
    53641 tttgataggc ttcattgaaa cttcatattt accaaatccg aaagattcac gagtacgcca
    53701 ttctccacct gtaagctctc ctttctcgtc ttgagcaatg gtgagacgta gaccttcaac
    53761 actaaatgag acattttcgg gagaccaacg acagccaaac atttcaccat ttgcccaatc
    53821 tgctaactcc atcgtatctg aatcatattc ttgaaacgtc tccatgtaag acactttatt
    53881 attttcatgt gtgttttcta tcgaatgtgt catctttcac cttctctttt ctataagcgt
    53941 tttcgactag tgaatgagca tactaacgta gctacaataa ataatacact ccctacgaac
    54001 atagataacc atcccgtttg gcttgaggta tttggaagtt tatgttggtt gcttagatta
    54061 gtctgattaa cattgttatt cggtaatggg agaggttgag tttttttcac ctcctgcttg
    54121 ccttccaacg ttacattgga ttgttgctga cctgaaggaa cactattctc atcttggtgg
    54181 tttgaatcat tatgtaaagt tgatgaactg tttgaatcgg atatttcatg ggaaagtgaa
    54241 gaaccttcat ttgaatccga cttgatttct gaagtctctt caggtgtcgt atttgtcatc
    54301 tgttcatcat tctctatttt agattccggt aattcaactg tattcggtgt atacttcatc
    54361 caatcataag aagcaaccaa aggcacgttt ccatcaaatg gttttagcca ttcatccaca
    54421 ccaataccag gccaggcatt catcataatt tttccaggtg tagttggaat atctgtggtt
    54481 gctgtatgaa ctgccacacc atctacaaac catgtaatag aatcctcttt ccaatcaaac
    54541 gcataggtat gaaattcttc agaggcgtca aatcctaaat tgtaataatg ttcatgacca
    54601 cctacaccat tggtaaaata gttgaactga atttttgttg tatcatatcc aacaaactca
    54661 atatcaattt catcccattg tgtgccatca cttggacccg tataagtaaa gaaggaagaa
    54721 actgtcccag gattactgat tggtttcatg cgtacttcat attttccata atggtaatat
    54781 tgttgggtac gccattcacc actattgtaa ccaccttttc catcattatc tatcgtaagt
    54841 gtcataatac catctgaaaa cgccacattt gaaggtgtcc atcgtgcatt gaacattgca
    54901 ccattagacc aatctgccaa ctgagccgta ctctcatcga aagtatcaaa atcagttgaa
    54961 aatgcttctt gcttaggagt ttcaacttct gatgatggtt ccacggtctc ctctactact
    55021 tctgaaatca tttcattctc tgggctagct gttgtagcag gtgaggtttc atctgattga
    55081 cttgttacag ctacttcagt ttcggctact acagtttccg tactcaatga tgtagtttca
    55141 gaagaatccg atataatttg ttctgaagtt ggtaatcgtt gactagccac atcttcagct
    55201 aaaatctgtt tcccattaac tgctaagcta cagatagttg atgcaacaca caaccaagat
    55261 agaactattt tctttgacat aaactgtctc cttaaaattg ttttattctt tgacaccacc
    55321 aagagtcact ccagcgatga taaatttaga aaggaagagg taaaccagta caattggtac
    55381 gatggcaact aaaatcatag tataaatttt tcccatatca aaattcatat agtctgcacc
    55441 acgaagggac gcaattaata tcggaacggt cattttatcc ttagattgaa gaacaagagc
    55501 tgggatgaag taattattcc atgaacctac aaatgtaaag attgcttgaa ctgcgatagc
    55561 tggtttcatc agaggaagaa caatcgtatt aaaagtacga aattcacttg aaccatcaat
    55621 tcgcgctgca tcaaccattg acagtggtaa agaggccttc atatagctat acataaagta
    55681 gaagaccgct ggcgaggcaa tagcaggaat aattaatgga agaaaactat catacatacc
    55741 catttgggta atcaatctca ggaaacccat tgaagttact tgagtcggca taactagaat
    55801 agccatgata aaagtaaagg ctattttttt aaatctaaag tcatacacat aaagcccata
    55861 ggctgttaag gctgagaaat aagtacaaac cgctgcagta gtaccagaaa caatcaaact
    55921 attgataatc cctttaaaca ttgggaaagt cccaccatta gcaactttca tcagattatc
    55981 ccaaagatat cccccaggga gggcagaaaa tcctctttgc aactctgaat gagaatgtgt
    56041 agcactaaca atcagaatat aaaagaagaa aaggcacata aatgatagga caatcaatac
    56101 aaaatgtgcc acaatacgcc gaaagtgatt ctgagcattt gttgacatat tctaacctcc
    56161 tatacttttt ttactttttg tttcatcttt gtacgcccaa gctttaattc attatttgtc
    56221 atcttataga caaaccaaca caagaacgca ctaactacga acagataaac agatagtgca
    56281 ccagccatgc catagttctt actcttcaag tgattattta agaacataat gagagttgta
    56341 gaagttcggt caggagctcc ttgtccatta gtcagaattt gtggaacatc aaacatttga
    56401 agccctccaa taatggatgt aatcaacgta tatgctagaa tcggacgaat cattggtaac
    56461 gtaatgtaaa agaaacgttg tcggctatta caaccatcaa tctctgctgc ttcaaaaata
    56521 tctggattaa tccccatgat tgctgccatt agcatgattg ttgaattacc gaaccacatc
    56581 agaaaattca tcacggcaac taaagtacgg gtgccaagag aggtacccat aaaatcaact
    56641 ggttccttaa atatacctaa tgaggtcatt atcgaattaa tgggaccgtt tgttgaaaaa
    56701 agggtaaaga aaagcatagc aaatgcagaa gccataatta aatttggcaa gtatataatt
    56761 accttataaa ttccttgtcc ccgtaattta agtcttgcat caacaaacca gtttgctaaa
    56821 agcagagcga ttccaatctg aggaataaag cccataagcc acattaacat ggtattacca
    56881 gcatatttta gaatatcgga ctgtaataaa ctgatataat tatcaagacc aataaaggtc
    56941 ggaccaattt ctctaattcc tgatcgatag tattcataaa aactatatcg cacagtttca
    57001 actaatggaa tgaaggaaaa aataaagaag gtgacaaaaa acggtaagat aaacagataa
    57061 ccccatttcc cgtaatttat acgtttacgt ttttgtttca ttctgttact ccttttagag
    57121 taaggcggtg caacatgcac cgctactctc tttaatcagg ccatttaatc tctgtgattt
    57181 ctggataacg ttccttaatg gcaatttcaa agttttcttt tgctttttca aagctaacct
    57241 tatcttgtag ataatcatta aagttattct gaatcaattc tacgctacct tggtcgtagg
    57301 cagataacgg agcaatctta atattttcag caactggagc aaaatattca aaggcatttt
    57361 gtccaccaag gaagtcagat ttgaaatttt catctttcgc tgcttcttgc ataccagatt
    57421 gagtatttgt aaagtcaaga taatcttttg aaattttcaa gagattttct ttatttcctg
    57481 ttaaagctaa aataatatct tttacatgtt tagaattgtc tgtaccaact gctccatgga
    57541 tataagaacc accccagttg tattcttgtg gtggtgtcgt cactgcccaa gaaccttcag
    57601 caccatccca gttcggtttc aagacaaaat caatacccca tgctgggaat aggaacgcaa
    57661 aattctttgc ttgggagctc atttccttgt tccattcatc ggtccactga cctttaactg
    57721 tcttggtaaa gtagccggca tctaaccatt ctttagagtc tttaacccat tgcataacct
    57781 ctggtgcaac attaatagtg gtttctccag cttttaccca aggttctttg atactatttc
    57841 catatagacg gaaagtatcg gctggagaag caaaaattgt atacccttta tctttcaata
    57901 tttttgctgt ctctttagca gttgcccaat cctcaacctt cttaccaatt tcagaaggat
    57961 catctgtacc aaaaacagct tttgctatat cacggcggta cacgattacc cctggtgtag
    58021 tttgccatgt cgaaccacgt tgaactccgt cttcatcaga ggctgttact ttagtaaaac
    58081 tatattggtc agataggtct ttttctggat caattccaag ttccttcaaa ggaagagctg
    58141 catcagcctc tttagatgag tatttgttaa catagtcagt ctcagagaga aaaatatcaa
    58201 ctttttcatc tgccgcagct gattcttgat ttagtaatgc ttcgtccaat ttttgttggt
    58261 aaacaccatc ttggttcgga ttgacaatcc aatgaatctc tgtcccatcc tttaaggttg
    58321 taatggttcc gtctgcagag gtttccttca cttcaggata tactgcctct acacgttgac
    58381 gaaattcgtc attccaagaa tagatattta ttactttacc ttcttctgat tggcttgtac
    58441 cagctgattc ggacttggat ccgcaggcaa caagtgcagt tgatgctaac gcagtcaata
    58501 ataaagcgct tacttttttg ttcatgtttc ttctcctttt agaagttttc tttgttttta
    58561 tgaattcatt atagctagaa agagtggggt attatattaa attttttcac aaaatatcag
    58621 atttttgaac taagttcata ttcttttttt cattgtgtac ttcattttga cttatataat
    58681 gtagaaaaaa agctgatgga aaacattttt ttaagaatca ttaaactttt ttacttcatg
    58741 tcatcattct gatattttct tcctaattct tattttttct atttactatt taccttacaa
    58801 ttaaactatc ttaacgacct atattcagaa aggattctta tgaacaaagt agaatttatt
    58861 gatcaaaatg gtagctttac attgaaacag gctcaaaaaa atcacacact ttattttcct
    58921 cttgcatctg aaaaaggatt aaaaagttcc atcacaccat tattgggtgg agattcaaaa
    58981 attagccaaa atagctttat tttagaaccg gttagtattg acaatctcca taataaccgc
    59041 tccacccgta atgtatggac ctgcattgat ggaaaagaaa cgatttcctt aactggacag
    59101 tcttctgatt acgatagaga cattgctaaa gaaaagcaac acgaccaagt gacggctgga
    59161 tttatgtggc atcaattaga acgtacggat gagattgcta acatatcaac tagtattaca
    59221 aatttcatac cagtttcagc caatattgaa gtcatgcata ttcgattgaa aaatctttcc
    59281 aatcatccga gacgattctc tacttatgtg gccgttccta tttttggaag gagtgctgac
    59341 aatcttcgtg atcaccgcca tgtaacttca ttattgcatc gtattcacac aacaaaaaat
    59401 ggggttgttg tcaatccgac catgaccttt gacgaacggg gacatcaccc aaatcatttg
    59461 cactattatg tagctggtta tacaggtgaa gggcacaccc cagtagcatt ttacccaact
    59521 gtagaggaat ttattggaga aagtggtaac tttactcatc ccgaagctgt ttttcaacac
    59581 tatcccggtt attctgatta taaaatagat ggaagagaag cgatgggagc ctttcgcttt
    59641 gaagaggtta ctctccaatc tgggcaagaa acttcctata ttgttttgtt aggaattaca
    59701 gaggaagata caaatattga agaggcttta gctgattact caactgatac acaaattcaa
    59761 caacatttag aacaaactaa gcagtattgg aacaacaaag tgaatgtgcg atttgaaaca
    59821 ggccaagctg actttgatca atggatgaaa tggatttgtt tccaaccata cttgagaaaa
    59881 atttttggat gttcattcct cccgcaccat gactatggaa gaggaggtcg aggttggaga
    59941 gacctctggc aagattgtct ctcactgtta ctattagaac ctacacaagt tcgacgtatg
    60001 atagtcaata acttcaaagg tgttcgaata gatggaacaa atgcgacgat aattggctcg
    60061 ggagaaggag aatttattgc ggaccgaaat ggtattaccc gtgtttggat ggatcatgct
    60121 ttttggccac tgcttactac aaaactctat attgatcaaa caggagatac atctattctg
    60181 actgaaaaag tttcctattt caaagacaga caagtaaaac gtggcacagc cattgacaaa
    60241 gaatggaagg aagaaaatgg ttcacagttg cttactatag atggaaatat ttacttaggg
    60301 agcattctag aacatttact gattgaacaa ttggctacgt tttatgatgt cggtgaacac
    60361 aatttttatc gattacgtga tgcagattgg aatgatgctt tggatatggc tagcgaaaga
    60421 ggggaaagtg tggcatttac ctgtgcctac gttggcagta tgatggattt agctcatctt
    60481 attcgagttt atgcaagcca gctagagaat caaacaatac aattaccaga agagtttgaa
    60541 acactgcttt ctcaagacct ggaagtttat gatgattatt caaaaaaaca agctgtacta
    60601 caaaaattct ctgaagcttg caatcacaaa ttaagcggga aaaccatccg tgttacattt
    60661 gccgaactcg cagttaatct gattgaaaaa gcaaattggt tgcgagaaca aattcaaaaa
    60721 accgaatggt taagtgaaga tgagaatgga tggtttaaca gttattatga taataatggc
    60781 catcaagtag agacttgcca caccaatcat ccaaaaatga tgttgactgg acaggtcttc
    60841 tctatcatga gctacgtagc aaatgaccaa cagattcagt ctatcattcg tagcgcagat
    60901 cgccatttgt atactcctga atgcggtggt tacagactga acacaaactt taatgaaata
    60961 aaaatggata tgggacggat gtttggtttt gcatatggag aaaaagaaaa cggagctgtt
    61021 ttttctcata tgacgactat gtatgctaac gctttatatc gtcgtggcta tgcgaaagct
    61081 ggatggaaag cattaaaatc tttatcaaat actgcattgg attatggcac tagccgaatc
    61141 tatccaggaa ttccagaata tttccgagca gatggaaaag gcctctatca ctacctgact
    61201 ggagctgcaa gctggtattt gtatactatg ctaacagagg tgtttggttt tcaaggaaat
    61261 cttgggaatc tcatcctcta tccaaaactt gttgctgaac aatttaatca acagaaccta
    61321 gcccaagtaa caacaacttt tgctggcaaa acctttatcc taacctatca caatccatta
    61381 agaaaagaat atggtgacta tgttatcagt cgggcctata tcaatggaat agaccttcca
    61441 atttcagatg atgcctacgc cactttatca aaagaaaaga ttgagaaatt ggattccaac
    61501 agcatccatc aaatcaccat tacactctct tgaagactcg aaaggaaata ttatgcaata
    61561 cggatacttt gatgataaga aaaaagaata tattattacc aaccctgcta ctccagcccc
    61621 ttgggtcaat tatctaggtt ctccagaata tggtgcaatc atttcaaaca atgctggtgg
    61681 ctatagtttt gcaacgtctg gtgcaaatgg gcggattctg cgatatatat ttaatcatat
    61741 ggaccaacca ggacgttata tctacataag agacaatgat agcaaagact attggtctgc
    61801 atcctggcag cctgttggaa aagatttgct agattactcg attcaatgtc accatggatt
    61861 aggctataca actatgaatg caaaatacag tagcattgca acgagtacca cctattatgt
    61921 tcctaaagat caaacctacg aagtatgggc cataacctta accaatcatt caaaccaaac
    61981 aagaaatctc actgttagtg gatatgctga atttacaaat catgggaatt acgaacagga
    62041 tcaagtaaat ctacaatact ctctttttat tagtcgaaca aaatttgcga ccaataaaat
    62101 agttcaacaa ctccatggaa accttgattc cttgaaagat gaagatcaag ttgatgaaaa
    62161 aaatgtcact gaaagattct ttggattagc tggcgctcaa atatcatctt actgcggcga
    62221 taaacaagaa ttcttaggat cctataatgg ctatcacaat ccacaaggaa tcctttcggg
    62281 acatctagga aacattctta ataccagcga aaatgcctgc ggtgccttat ctagtcaagt
    62341 gattttaaaa ccaggccaat ctaaaacaat agctttcatc cttggagaaa aaacgcaaga
    62401 ggaagcagat cgaatactcc atcgattcac taacactgaa aaggaaatca aagatgatct
    62461 cctcgcatta aaagaacttt ggaatagtcg attagcaaat ttacaagtta aaacacctag
    62521 ctcagaattc aattcaatgc ttaacatttg gaatgcctat aactgttaca tgacctttat
    62581 ctggtcacgc gcagcttcct atatctactg tggattgcgt aatggctacg gctatcgaga
    62641 tactgttcaa gatatacaag gtataatcca cctacaccct gaaatggccg ttgataaaat
    62701 aaggtttatg ctgtccgccc aagtaaacaa tggagctggc cttccacttg taaaatttac
    62761 ccataatgct ggacacgaag atactccaga tgacccttca tatgttcaag aaacgggaca
    62821 ccctgcatac cgagccgatg atgctctttg gctcttcccg accatttata aatacataac
    62881 tgaaacaggg aatattgact ttctggatga agttattcca tacgcaaatc atggaaaagc
    62941 gacagtatac caacatcttc aagcagctat tgatttttca ataaatcatc tgggtccaca
    63001 tggattacca gctggactac acgctgactg gaacgattgc ttgcgacttg gagcaaatgg
    63061 cgaatcttca tttgttgcgc tacaattcta ttatgccctt tctatcatca aagaatttgc
    63121 ggttgaaaag aatgatacag cttatttaaa gcaaatagaa caacttcaag aggaatacta
    63181 ttcgaaaatt caacatctat gctgggatag agacagattt atccgtggct tcactgagaa
    63241 tggggaaaaa atagggactc ctgaagcaaa tgaagctaat ctttggttaa atccccaaag
    63301 ttgggcagta attagtggat tagctaaacc agatcaagca cagcaagcta tgaatcaggt
    63361 cctaaatcgc ctcaacactc catttggtgc cgttttgatg gatcctccct atcataagga
    63421 agcatttgat ggtgcactag cagtcattta caatcagggg acaaaagaaa atgctggcat
    63481 cttttctcaa tcacaaggtt ggctcatcct agcggaagcc ttattgggaa acggcaatcg
    63541 tgcatttaac tattatttgg aaaactctcc agcggcccag aatactaaag caaacatacg
    63601 gaaattagag ccttattgtt ttggacagtt tacagaagga aaagatagcc ctcactttgg
    63661 tagatcacat gttcactggc taacaggtac tgcttcaacc atgatggttg cgagtgtaga
    63721 gggaattcta ggaattcgac caacacttga cggtattcgc ttatcacctg ccattccaaa
    63781 agaatggcct gaggtacaaa ttactaaaca gtttcgagga aaaactttgt acatcaccat
    63841 ctctaatcca aatcataaag aaactggatg cagctctcta atcttaaatg gagtagaaat
    63901 tgatggaaac tacattgacc aatcactact gaaagaggaa aattcaattt tattaaccct
    63961 ctaattcaaa cttcctccct ccccactctt taagagaatg gggagtttta ttatccagat
    64021 agcaaaaaga aaaagaccat caaacgataa tctttcacaa atacaatgtt acttatgtat
    64081 tttctcagct tcttttatct tacgtggacc tgttccatag cgttccgcgt ctctatcttc
    64141 cttataaggt aaaaaataag ctgctgcaat atagagagca atcagaagga ggaaggattt
    64201 gcctaagagg agacctgcaa taaatatcgc gcgtgttacc caggattccc agcccaattt
    64261 atgcgctatg ccggcaagaa cccctgatac tatcttcccc tgccttactt tatataattc
    64321 aattgacatc ttttattcct ttcacgtaaa agcccccttg acctgtttgt accttcaaga
    64381 aaagtaaatc attgccagat ttttcaaact gatagggact atttttcttt ttccggttaa
    64441 ccaagacatg accagattgc gactcaatct gcccccgaat tccctggcct ttgccagttt
    64501 gtaaagtcaa gggagcctga gctagttgca catacaagtg ttggggataa ccaccgcaag
    64561 tcgtcaagcg aatatcctgt tgttttttat cccttgaact gcggatagaa atatcttcaa
    64621 atggtaagta atccaagcga gcatctgcct gaccaagttc caaatccagc actgacatcc
    64681 attcctgagg caagttgatt gtcaaacgac aggccaaact actgtgaaaa taaagcccct
    64741 ttttttcaac ataaagacga ggaagcttat cttctggtgc atcttgattg tagcaaatct
    64801 ccacactaat ctgattattt ttagacttag ccaaagttag acgtccctca gataatttta
    64861 aaaagagtga ttcaatccct tcaaaactat aggattgttt caatttggag gaagcaaaga
    64921 ccttaaaact tggcaaggta aaattcaatt ttactttttc ttccacaaaa agaaagtctg
    64981 gttcttgatt catttcctta aaacaggcac gcgcctcttc cttggtcaag acaccttttt
    65041 catataactc aattaagcgt tcttctctct tttgcgtcat agactcacct caattctact
    65101 ctagtatatc acatttctcc acaaaaaaat cagcccgaag actgattctc tattctttca
    65161 aagtaagttt gcccctacac ttcccacatc ggtatttttt taggtcaatg cggcgcttgc
    65221 gctggtagac ttgcccacag gattgacagg tatacagcag actaggcttg gcagcttgtt
    65281 ccagtttggg agcatagcgc aggccgtcca ccgcagccaa caattccttg aaatccctgt
    65341 ctccgtgccg atagcctttc ttctcaaagt agagatggta gtggcagagc tcgtggcgga
    65401 caatcttccg aaagacttct aaaccttgct cctccaagtg cttgggattg aaatccaaat
    65461 gcccatccct tggaaaaaag cgaccacccg ttgagcgtaa tcgcctgttc cagattgcta
    65521 catgccgaaa ttccttaccg aagtcttgca gggagacttc ttgcacatac ttattcaaat
    65581 ccatttggtt tcaaaaggct aagaccgata cggttgcgtt tgatgtcgac ttctaccacc
    65641 cagaccgtta cgatttcccc gacggcgagg atttcacttg gatgaggcaa ggcttgttgg
    65701 cgtccatttt tatcccgttt gcgcttgacc atgcgtgaaa tgtggaccag accatcctcg
    65761 tggacaccga tatccacaaa ggctccaaaa tccacaatat tacggaccgt gccttgcagt
    65821 tcctgtccga ccaccaagtc cttaacatcc aagacatctt gacggaggac tggtgcttca
    65881 aagtcatccc gtaaatcacg acctggcttg agcaagtctg cgatgatgtc cttcaaggtt
    65941 tcctgaccaa caccgatttt ttctgccgta tcagcgatag caacctgctt taatttttcc
    66001 tgcgcagcct catctaagtg gtcaatcgct agaagttcta acagtttttc cacagccttg
    66061 taagactcgg ggtgcacgcc agtattgtcc aaaaagttag tcgcatcagg aatccgcaag
    66121 aaaccagctg cctgctcaaa ggccttgtca cccagacgag gcaccttttt aagttgctga
    66181 cgagaggtca gagcaccatt ttcctcgcgg tacttgacga tgttctccga aatggtcttg
    66241 ttaagaccag ccacgtgagc caaaagggca ggactagccg tattgacatt gaccccgacc
    66301 tggttgacca ccgtatcgac cacaaagtcc agactttcag acagagactt ctggttgaca
    66361 tcgtgctggt actgaccgac accgatagac ttgggatcga ttttgaccag ctcagccaga
    66421 gggtcttgca gacggcgggc gatggaaatg gcagagcgtt tctcgacggg gaggtctggg
    66481 aactcatgtc tggccagttc agaagctgaa tagacagaag ctccgctttc attgacgatg
    66541 acgtaggaaa cttctgggaa atccttgagc aaatcagcga cgaaagcctc cgattcacgg
    66601 ctggccgttc catttccgat agcaatgatt tccacttggt attgtccaat caggtctgcc
    66661 aagtcttttt ttgcctgagc aatttggcgc tgaccagccg gctcaactgg atagatgacc
    66721 tgggttgtca agagttttcc cgtctggtct accactgcta gcttggctcc tgtccgaaag
    66781 gcagggtcaa aaccaaggac aatcttgcct tttagaggag atacaaggag cagatttcgt
    66841 aggtttttag agaagagctg gatagctcct tcttctgctt cttccgtcaa ttctgttcga
    66901 atacgacgct ccatagcagg caaaattttc ttcttaatag cctgctggat cacatccttg
    66961 atgtagctat tagactgtgg aaaacgtagc tcaaagaaac gaaccatttt atccacattg
    67021 tgttcaaaag aaaccttgag aatacctagt ttctcaccgc ggttaatagc caaggtcttg
    67081 tagccttgca tcttcgccac tttctcagaa aaatcatagt aaatctgaaa gacttctttt
    67141 tcatctgctt cttgatcttt tagctctgaa gtcaggcttg aattggtctg tacttcatgg
    67201 tagacccagg cccgaagttt gttgtcttct gagatagctt cgaccaaaat atccacagca
    67261 ccagccaaac aagcctgagc agtatcaaaa ccttcacaga tgaaactagc agcctgttct
    67321 tccaaatcag ccacattctg caaaattaga cgagccagcg ggaacagtcc agcctcacgc
    67381 gccaccgttg ccttggtccg acgtttttcc ttataaggca agtatagctc ttccacatct
    67441 gccaactttt ccgcttcctc gatagcctga cggagctggt ctgtcaattt gccttgttct
    67501 tcaatcttgg caaggacagt agccttacgg tcagcgagag cagtcaaggc cttgtctcgg
    67561 tcgatgatgg acttgatgac cacctcgtcc aggttccccg tcacatcctt ccgataacga
    67621 gcgataaagg gaatggtatt gccttcagct gttaaagcga gaaccgtatc aatctgtttt
    67681 aaactaacgc ccaattcctg agcaattttc aaatattttt cttccatagc tactattata
    67741 gcatgaaagc ggtaggttgt agatgataaa agagtatgct gcagtgacaa catactcttt
    67801 tatattaaaa ttctgccaaa tcaggatcca actggccttt taagcctgtc aatgtatcca
    67861 actttgcaac tgctgtcgga ctaatagcca agccatcaat ttccaaattc gccttaatat
    67921 tttctggact agttgatttc gggagaggga gaaagccttt atctaaagac caagccaatg
    67981 ctaactgggc aacactacaa ccagcttctt tagccaaatc ggctgcttct tgactttgga
    68041 aaaggcttcc tgtaccaaat gggctatagg cctccaagag aatccctttg gctttgcagt
    68101 aagcaactaa ttctgactga ggagttcctg gagctaacat aatctgatta gccatcggga
    68161 taatctcagc cgtttccagc aaagcttcta gatgatgttc cataaagtta gaaactccaa
    68221 ttactttcac ttttccagca cgatagagct cttctaatgc cttccaaacc tgggcatttc
    68281 gttttttcca tccaatcgtc tcacgactag ccttgggatt tggccaatgg atcagtaaca
    68341 aatccagata atccacctga agtttttgca tggattcttc tactgaagca cgggtatctt
    68401 catagccaat cttatcattc caaaccttag ttgttaaaaa aatgtcctca cgagctaggc
    68461 cactatcagc tatagctcga ccaacactag cttcattgcc atagatttga gcagtatcaa
    68521 tatggcgata accagcttcc aatgcataag aaaccgcacc gtacgccact tcaccatcgg
    68581 gtatctgcca agttccaaaa ccaattttag gaacagttac accatttgaa aacgtatatc
    68641 ttgtcataaa agacctccta tttcttctat ccccagtata aactaaattg tcaatcaata
    68701 caaaataatg cgacctaaaa ataaaagaca cccgaaagtg tctgctcaca tttattgtat
    68761 acttactttt caaaatttat tttcttggat agtttatcga taacaacagc tccaactaat
    68821 agagaaagca attctcctgt tgctgttgtc aaccaagtta gaaagaatgg taaatcatat
    68881 aagactttta attctaaagc aatggtaaac atagttgccg caaaaaagaa tgagaaataa
    68941 aagaaagcct tgttaaataa tccaccgaat agatagtcct tcttgtattt ttcaaacaga
    69001 ataactccca acgtaacgaa gattaatgtc gagaatccac ccacaaaaag gtcaatcacg
    69061 ccaaaaccaa tcaagttgga aatcatgcag ccaatggtca cggcgataat atacttacga
    69121 ttataaaaag ccaagaaatt gagcatttca gacaaacgaa actgaacagc cccgaaggaa
    69181 atagcattca atggcggtgt caaggtaaga gcgacataaa tcgccgcaac aagagcaatt
    69241 tctgccatat ctctggcagt ccatttagat gtattcataa aattctcctt tagcaaaaaa
    69301 gcttaaaata tgcttgggta aagtgagcaa gccccaaggg tcattgaaaa ttcaacaacg
    69361 ttgtctagta tagcatattt tccaaaaaaa tggtagacta ttccttatga aaaagctatt
    69421 ttatcaactc ataaacaacg aagtcattct atatttgatt gcaggtgtgg cagcaaccct
    69481 tgtctatatg gtcactcgga tgggactatt tttagttatt ccttccattc tattggttac
    69541 tcttttggcc aatacggttg ccattctctt tgctttctgg accaacgacc gtttcgtttt
    69601 caaacaagcc agagagggtt ggccacaacg tctggtcaag tttgtatctg cccgcatcgc
    69661 gaccttggtc atggatatgg ctctagccta cttgctggtt caagcatacc cacaattgat
    69721 tgggcagttt gtcaaccatg atttgacact tgtcaacgcc atcgccacac tcttctcaca
    69781 agtcttggtc attgtcctaa actacgtttt aagtaaatta tttgtattta aagataagaa
    69841 atgaggttgg gcaaaaaga
//
LOCUS       DASFQS010000004        55049 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.004, whole genome shotgun sequence.
ACCESSION   DASFQS010000004 DASFQS010000000
VERSION     DASFQS010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 55049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 55049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..55049
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.004"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     misc_feature    66..200
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            227..721
                     /locus_tag="U1041_000197"
     CDS             227..721
                     /locus_tag="U1041_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001287276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEM4767342.1"
                     /translation="MSEAIIAKKAELVNAVAEQMKAATSIVVVDARGLTVEQDTVLRR
                     NLRGAEVEYKVIKNSILRRAAEQAGLEGLAELFVGPSAVAFSNDAVAPAKTIYDFAKT
                     ADALEIKGGAVEGKVSSKEEIEALATLPNREGMLSMLLSVLQAPVRNVAYAVKAVAEK
                     EDAA"
     gene            787..1152
                     /gene="rplL"
                     /locus_tag="U1041_000198"
     CDS             787..1152
                     /gene="rplL"
                     /locus_tag="U1041_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEM4767343.1"
                     /translation="MALNIENIIAEIKEATILELNDLVKAIEEEFGVTAAAPVAVAAA
                     GGAAEEAKDSFDVELTSAGDKKVGVIKVVREITGLGLKEAKELVDGAPAMVKEGVATA
                     EAEEIKAKLEEAGASVTLK"
     gene            1352..1525
                     /locus_tag="U1041_000199"
     CDS             1352..1525
                     /locus_tag="U1041_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767344.1"
                     /translation="MQKKEQSSRQMVMCHLVAILGVDIEKATHLVDEMEQVGLIRFDE
                     FGNVGILVLEGQS"
     gene            1522..2340
                     /locus_tag="U1041_000200"
     CDS             1522..2340
                     /locus_tag="U1041_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiator protein A"
                     /protein_id="HEM4767345.1"
                     /translation="MKRITANQYQTSERYYKLPKVLFESERYKDMKLEVKVAYAVLKD
                     RLELSLSKGWIDEDGAIYLIYSNSNLMALLGCSKSKLLSIKKTLREYGLIDEVQQSSS
                     ERGRMANKIYLGELEHEPTPVLHTDGASVKKTLGGSQRKTGPVLYSAPSETEGSETKY
                     SETKGSDFLIEDEEERQLVDEKQEENFISKVDGVTKYDRDYIWGLVHDQLRQTGLSQS
                     ASDYAMIYFSDRYQYALEHMRFARSAEVIAEYVFNGVLSEWTKQLRRQEVKGGE"
     gene            2489..3844
                     /gene="dcm"
                     /locus_tag="U1041_000201"
     CDS             2489..3844
                     /gene="dcm"
                     /locus_tag="U1041_000201"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEM4767346.1"
                     /translation="MKFLDLFAGIGGFRLGMESQGHKCLGFCEIDKFARTSYKAMFNT
                     EGEIEYHDIKEVTDHDFRQFRGQVEVICGGFPCQAFSLAGRRLGFEDTRGTLFFEIAR
                     AAKQIQPRFLFLENVKGLLNHDEGRTFSTILSTLDELGYDVEWQVLNSKDFQVPQNRE
                     RVFIIGHSRRYRPRFLFPLRGENSPAHLERLGNINPSKRGLNGEVYLTNGLAPTLTRG
                     KGEGAKIAIPVLTPDRLEKRQHGRRLKDNQDPMFTLTSQDRHGVVVVGNLPTSFDQTG
                     RVFDISGLSPTLTTMQGGDKVPKILLREELPFLKIKEATKTGYAKATLGDSVNLAYPD
                     STKRRGRVGKGISNTLTTSDNMGVVVAALEYRQDKWYEVTGIVLEGKLYRLRIRRLTP
                     RECFRLQGFPDWAFDKAESVSSKSQLYKQAGNSVTVTVIEAIAREFRRMEEEEKHEPT
                     T"
     gene            3828..4256
                     /locus_tag="U1041_000202"
     CDS             3828..4256
                     /locus_tag="U1041_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001050381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767347.1"
                     /translation="MNLLHKKSILECTELEERIHQVETNQLLQKILSLPNFDCDFEVT
                     FEDDYHKEMNDPLFYESNLHRISDFMETRDIKNGVDTLLTKDNHLAFRAFGENYSARG
                     KEGILTTLVTVKCFGEGRMPIDMSRYFSTPEPTVEDSLTL"
     gene            4267..4650
                     /locus_tag="U1041_000203"
     CDS             4267..4650
                     /locus_tag="U1041_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017770591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767348.1"
                     /translation="MLEVYLGNNANTNQDLLTILTTYGVTYRCIKACDVNREILLSLF
                     AKTTDCFELLSPRFLRFKRQYSISLNEMIQLILQKPDQNLRLPLIVCQNHVYPAIGLD
                     EVRTFLPRQVKEELFQASLMKQVTG"
     gene            4659..4892
                     /locus_tag="U1041_000204"
     CDS             4659..4892
                     /locus_tag="U1041_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003065178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4767349.1"
                     /translation="MNERFWDNLEIILSEREITWAELARKVFKGQYVYPSEFNRLYQK
                     LRHYKSNRLMPQTRWVERIVLVLDIDYEDLFKR"
     gene            4895..5479
                     /locus_tag="U1041_000205"
     CDS             4895..5479
                     /locus_tag="U1041_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000619435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767350.1"
                     /translation="MIRIVVFYLAILLNGLLVSLCLQDYMSIKVLVLLQLVLLSVTCL
                     EIARHKTLQAKKITLSNRLRWLLLGFVCMVAFAVFISFLFPVQSRNQAVLLQVGKQVP
                     PIIFLLFLVNASILEEIVYRQLLWEKLTFPFEQIGVTSFLFVLSHGPNQLGSWLMYSC
                     LGLTLAVVRLKTDCMTAIALHLLWNSLAYVVTFL"
     gene            5557..6045
                     /locus_tag="U1041_000206"
     CDS             5557..6045
                     /locus_tag="U1041_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767351.1"
                     /translation="MSSEQQERQAMQYVERSSLLTVRTLLKLLEWSARQALAQDSAYK
                     IGVQKLEELLQSPYAIEAIDVSKDILDKPIDVEKFKELMESEKLPIAISWQKDYLYFY
                     AKDKTLLDHHLDELLKKLMSNPEKLEGLTFDKTLDQEIELAKEKIRVTEPSAVKTKEV
                     TL"
     gene            6045..7862
                     /locus_tag="U1041_000207"
     CDS             6045..7862
                     /locus_tag="U1041_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000287311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEM4767352.1"
                     /translation="MYSRRKALVFGLMGLAFGYFCHRLTLLYDSLTNAPPMERFAYLL
                     GEGLNQVFNPLWLFSFTQKSLLAFILGVLTMTLVYLYVSTGQKVYREGEEYGSARFGN
                     SKEKRNFYSKNPFNDTILARDVRLTLLEKKKPQFDRNKNLIVIGGSGAGKTFRFVKPN
                     LIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDL
                     NRMLTVYFNNTKGNGSRSDPFWDEASMTLVRAIASYLVDFYNPPGSSKQEQEARRKRG
                     RYPAFSEIGKLIKLLSKGDNQDKSVLEVLFEDYAKKYGHENFTMRNWADFQNYKDKTL
                     DSVIAVTTAKFALFNIQSVIDLTQRDTMDLKTWGTQKTMVYLVIPDNDTTFRFLSALF
                     FSTVFSTLTRQADVDFKGQLPIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPIL
                     QNIAQLQGLYKEKEAWKTILGNCDSLLYLGGNDEETFKFMSGLLGKQTIDVRSTSRSF
                     GQTGSSSTSHQKIARDLMTADEVGNMKRDECLVRIAGVPVFRTKKYFPLKHKNWKWLA
                     DKETDVRWWHYHINPLTAEEEVDLSGHKIRDLSTETTLH"
     gene            7880..8122
                     /locus_tag="U1041_000208"
     CDS             7880..8122
                     /locus_tag="U1041_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012678629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767353.1"
                     /translation="MNQKLTGFVYGVDASSMFSQAMSLLQKGLIAVGAFLVVMGIINL
                     STNIKDGGPGVRNAILEIVGGVMVGAAGAFVTQITI"
     gene            8141..8995
                     /locus_tag="U1041_000209"
     CDS             8141..8995
                     /locus_tag="U1041_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003065166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbL"
                     /protein_id="HEM4767354.1"
                     /translation="MIMNFTSPFVYLASEKVSSDSLFEGFQVDLESTANLVKSLADFN
                     PTVWSYMTAITKGIMQPLGVAILAVVLVLEFSKMAKKIANSGGAMTFEAMAPMIVSYI
                     MVAVVITNTTVIVEAIIALASYVIEQVASLVTNGGANYDTISGIKGSGIVGKMIIGFF
                     AILIWLVRMASIMVVNILITIRFIQLYLMIPFAPVTIPTFLSDDWRSVGIGYLKNIMV
                     YAVQGILIFLIVSLVPLFESAGKIAVSNGAGVMESLAIMFGGLVQAILLIIALVGSQR
                     TARSILGM"
     gene            9057..9410
                     /locus_tag="U1041_000210"
     CDS             9057..9410
                     /locus_tag="U1041_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrgI family protein"
                     /protein_id="HEM4767355.1"
                     /translation="MNTRVFKDISKVQHRAWLGFTTRQVIFVFPAVALTILVLGLNLF
                     YWQFGDWFVYGFVFSFTIPLMLFGVYRPNDLPFETYLKYRFHYELTVPDRTFTGRKGD
                     QREKIKTLNETKDIF"
     gene            9367..10860
                     /locus_tag="U1041_000211"
     CDS             9367..10860
                     /locus_tag="U1041_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000734148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion protein"
                     /protein_id="HEM4767356.1"
                     /translation="MKKLKHSMKPKTSSNDQKQKTKTQKQEIRPSTVNTLAYQGLFQN
                     GLMQVSPSYFSQTYLLGDVNYQTVGLDDKGAIVEKYSDLINSLDDKTNFQLTIFNQKV
                     NLEKFRKSILYPLQEDGFDAYRDELNRMMDANLEAGENNFSAVKFLSFGKSDQTPKLA
                     FRSLSQIGEYFKSGFSEIDVSLGLLGGEERINVLADMLRGENHLPFSYKDLTLSGQST
                     KHFIAPTYLSFKHKNHIELDERLLQIVYVRDYGMELGDKFIRDLMQSDLEVMISLHAK
                     GSTKSETMTKLRTKKTLMESQKIGEQQKMARTGIYLEKVGHVLENNIDEAEALLQTMT
                     QTGDKLFDTVFLIGVLADTEDQLKQSLDIIKQVAGSNDMIIDNLTYMQEAAFNSLLPF
                     GKNYLEGVSRSLLTSNIAVNAPWTSVDIQDKGGKFYGINQISSNIISIDRGKLNTPSG
                     LILGTSGAGKGMATKHEIISTKLKEADSDTEIIIVDPENEVRQEVVL"
     gene            11389..13062
                     /gene="ltrA"
                     /locus_tag="U1041_000212"
     CDS             11389..13062
                     /gene="ltrA"
                     /locus_tag="U1041_000212"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017284794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HEM4767357.1"
                     /translation="MNDKHSTTAPAEKLSHKQLLAKQWKSIDWKRAEQEVNRLQIRIV
                     KATQAKHTNTVKRLQYLLTHSFYAKALAVRRVTTNKGKKTAGIDGELWTTPTQKMEAL
                     LSLTDKGYKASPLRRVYIDKKGKKKKRPLGIPTMYDRAMQALYALALEPVAETTADTK
                     SFGFRKGRSCQDACEYIFTALSRKASPQWILEGDIKGCFDNISHDWLLENIPMDKSIL
                     KQFLKAGFVFKGELFPTEDGTPQGGIISPILANMALDGLQQVLSDRFHTNRLGKTDLR
                     FKNSHKVNLVRYADDFIVTAATQEIALEAKELIREFLLGRGLELSEEKTLVTHINDGF
                     DLLGWNFRKYKGKLIVKPSKNSIQTVIGKFSETILKRGKAWEQEVLIMKLNQQIRGWT
                     NYHQSVCASEAFSYLDYHLYELLWRWAKRRHPKKGQWWVSTKYWHRRGNRSWVFASGD
                     KELIRVDHTAIVRHTKVRENANPYLDIDYFAQRTFNHGMKRLTGRFKLVWKKQDGRCH
                     HCGLPMELGEDREIFFKVPKSKGGVEEVDNMAYVHSYCQRLFIESRSKE"
     gene            13067..14029
                     /locus_tag="U1041_000213"
     CDS             13067..14029
                     /locus_tag="U1041_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000892893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein VirB4"
                     /protein_id="HEM4767358.1"
                     /translation="MLEPYEGKLSRTVLREEGGSNTTNLLDYSIIGQAFGGESIDIAP
                     DSTTFLNVLDLSDDNMDEDPIKVKSEFLLSWIGKLLDRKMDGREKSLIDRVTRLTYKH
                     FATPSLVEWVFVLSKQPEQEAKDLALDMELYVEGSLDIFSHRTNIKTDSHFLIYNVKK
                     LGDELKQIALMVIFDQIWNRVVKNQKRGKKTWIYFDEMQLLLLDKYASDFFFKLWSRV
                     RKYGAISTGITQNVETLLLDANGRRIIANSEFMILLKQAKSDREELVHLLGLSKELEK
                     YLVNPEKGAGLIKAGSTVVPFKHKIPQHTKLFDIMSTDPEKMRT"
     gene            14031..16832
                     /locus_tag="U1041_000214"
     CDS             14031..16832
                     /locus_tag="U1041_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4767359.1"
                     /translation="MKEDKKLVKQARQNFRSNLKSARMHYRKEVRTLRQTVPKKGRFR
                     KQAQNSLFQDKKTELKENLLSSQKEAEEKFLKEITYVSPRLLKAMEIKNYRLPQAQER
                     LRTARKHLSEVKLSEKQKAVNPKFTFQKENPSLKSRFQFHQEKSFDRLSAEKDVCSAK
                     REVKQLKKVRKSKKNSTKVKVRLGLAASESLDLVSQDDDLDGLRTLKDTSLKARRYGR
                     FTFQAGKVAVKSGQTGVRFTKTKFSHGKERFQNFKKGKGFTRQKPLKPRRRYQTFLKL
                     ARKQSVAGFKGIVQAIKGSMTFFSVLAGNPLTWIVSGILLILLLMMSFFMSVSGSSVI
                     QQDEIELSKSYTHMTLEDAEHTRTNEKGITYYTKIDEIMVYMNHQYQDYKLDDFMETG
                     GATYKEFLSQVWTDLNGGDSIKSMSDLYKEPAYKLSDEDQEELKELTEGGNYLALQEL
                     DNPFQGQTDEDSLSMTYRYGYEVIDEKPTLHYHIILEAKEGQVIVSPMDGTVSHDGEN
                     VILTSGKGVNKTKLTLFGIHSGRVSENQQVLAGDIIGQTKDGTGLKVTYQKVDDDTDK
                     LVYVNPAFYFPKVIQVQTTILPTIGQFGGDEFERAKAIYDYLKSKGATNQATAAILGN
                     WSVESSINPKRAEGDYLSPPIGATDGSWDDEGWLSLNGPTIYNGRYPNILKRGLGLGQ
                     WTDTADGSRRHTLLLEYAKGKHQKWYDLGLQLDFMLHGDSPYYTNWLKDFFKNTGSPA
                     SLAQLFLIYWEGNSGDKLLERQTRASEWYYQIEKGFSQPNGGTAQSDPKALEAVRGDL
                     FENSVPGGGDGMGYAYGQCTWGVAARINQLGLKLKGKNGEKIPIISTMGNGQDWVRTA
                     ASLGGETGTSPQAGAILSFAGGGHGTPAEYGHVAFVEKVYPDGSFLISETNYNGNPNY
                     TFRKLSGVDSSLSFAYTTK"
     gene            complement(16895..17740)
                     /locus_tag="U1041_000215"
     CDS             complement(16895..17740)
                     /locus_tag="U1041_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HEM4767360.1"
                     /translation="MNKAKLTALCHKISKNTGLTFNSVMTYYFLEVILKKLSQSSYSN
                     HYIFKGGFLLSNVIGVESRSTVDIDFLFHQITLSEETVKQQLKEILADSEEGISFVIQ
                     SITAIKESDDYGGYRATISCQLENIKQVIHLDIATGDVVTPQPITYDYKAIFDEDNFP
                     IIAYTIETILAEKLQTIYSRNFLNSRSKDFYDVYILSKLKKEDIDFIQLRNACQRTFS
                     YRETELDFVKIIELLERFKSDPIQNKQWQNYSKKYSYTKGISLADVLDEMIRLITVLI
                     SINSD"
     gene            complement(17737..18327)
                     /locus_tag="U1041_000216"
     CDS             complement(17737..18327)
                     /locus_tag="U1041_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000037247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system AbiEi family
                     antitoxin domain-containing protein"
                     /protein_id="HEM4767361.1"
                     /translation="MSKKEILLDFIEKNNGIVTNKDCKALGIPTIYLTRLEKEGIIFR
                     VEKGIFLTQNGDYDEYYFFQYRFPKAIFSYISALYLQQFTDEIPQYFDVTVPRGYRFN
                     TPPANLNIHFVSKEYSELGMTTVPTPMGNNVRVYDFERIICDFVIHREKIDSELFVKT
                     LQSYGNYPKKNLAKLYEYATKMNTLEKVKQTLEVLI"
     gene            18605..23500
                     /locus_tag="U1041_000217"
     CDS             18605..23500
                     /locus_tag="U1041_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000167702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4767362.1"
                     /translation="MTKTCNHHFLVNQEKGEKHVFRKSKKYRTLCSVALGTMVTAVVA
                     WGGTVAHADEVTSTVDTIIQRTENPATNLPEAQPTPVSEQTESLALTGQSNGAIAVIV
                     PHDTVTQAVEEAKAEGVSTVEDSPMDLGNTTSAAETNQQISKAEADAQNQVVAINEVT
                     ETYKADKATYESNRARIEQENKELSQAYEGVNQTGKETNAWVDTKVNDLKTRYADADV
                     TVIEQVVSSGNGTSVLDYTNYGKAVETIQSTNEQAVADYLTKKTKADDIVAKNQVIQK
                     ENEAGLAKAKADNEAIERRNQAGQAAVDAENRAGQDAVDQANQEKQQLVSDRAAEIEA
                     ITKRNKEKEAAARKENEAIDAYNAKEMERYQRDLAEISKGEEGFISEALAQALNLNNG
                     EPQAQHGANTRNPDQIISTGDALLGGYSRILDSTGFFVYDSFKTGETLSFNYQNLQHA
                     RFDGKKISRVTYDITNLVSPAGTDAVKLVVPNDPTEGFIAYRNDGNGDWRTDKMEFRV
                     VAKYFLEDGSQVTFSKEKPGVFTHSSLNHNDIGLEYVKDSSGKFVPINGSTVQVTNEG
                     LARSLGSNRASDLNLPEEWDTTSSRYAYKGAIVSTVTSGNTYTVTFGQGDMPQNVGLS
                     YWFALNTLPVARTVTPYSPKPHVTVELEPIPEPITVTPDVFTPKTFTPEKPVTFTPKP
                     LEEVVQPSLTLTKVTLPVNPTPKELPTPPQVPTVHYHAYRLTTTPEIMKEVVNSDQAN
                     LHEKTVAKDSTVIYPLTVDALSPNRAQTTNLIFEDYLPAGYLFDKETTQKENGNYVLS
                     FDETKNFVTLTAKENLLQEVNKDLTKVYQLTAPKLYGSVQNDGATYSNSYKLLLNKGT
                     TNAYTVTSNVVTVRTPGDGETTTLITPDKNNENADGVLINDTVVALGTTNHYRLTWDL
                     DQYKGDRSAKETIARGFFFVDDYPEEVLDVVENGTAVTTLDGQKVSGITVKNYASLNE
                     APKDLQDKLARAKITPTGAFQVFLPDDNQAFYDQYVQTGTSLALLTKMTLKDSLYGQT
                     KTYSNKAYQVDFGNGYETKEVTNTLVSPEPKKQNLNKDKVDINGKPMLVGTQNHYTLS
                     WDLDQYRGIKADNSQIAQGFYFVDDYPEEALLPDEAAIQFVTSDGKTVSGITVKSYSQ
                     LSEAPKTLQAALSKQKIQPKGAFQVFMPEDPQFFFESYVTKGENITIVTPMTVLETML
                     NSGKSYENVAYQVDFGQAYETNTVTNFVPKVTPHKSNTNQEGISIDGKTVLPNTVNYY
                     KIVLDYSQYKDMVVTDDVLAKGFYMVDDYPEEALTLNPDGIQVLDKDGNRVSGISVST
                     YASLSEAPKVVQDAMAKRQFTPKGAIQVLSSDEPKTFYETYVKTGQTLVVTLPMTVKN
                     ELTKTGGQYENTAYQIDFGLAYVTETVVNNVPKLDPQKDVVIDLSHKDESLDGKEVAL
                     YQTFNYRLVGALIPSNRATDLFEYGFEDNYDEKHDEYNGVYRSYLMTDVILKDGSVLK
                     EGTEVTKYTLQQVDTENGLVSISFDKSFLETISDDSAFQADVYLQMKRIATGQVENTY
                     LYTVNGYVISSNTVVTHTPQPEEPSPNQPTPPQPPIETIEPPVPANILPNTGEQESLL
                     GLIGAGILLGTAYGLKKKEEK"
     gene            23501..23692
                     /locus_tag="U1041_000218"
     CDS             23501..23692
                     /locus_tag="U1041_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEM4767363.1"
                     /translation="MNPKTIYEKDSDQDGLTDAQELALGTNPQSVDTDGDGQADLEEL
                     QSGHSPLVPQKELCDGLEL"
     gene            23676..24227
                     /locus_tag="U1041_000219"
     CDS             23676..24227
                     /locus_tag="U1041_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767364.1"
                     /translation="MAWNFDTMKEALSEMEKVDYQEFIKAFLSLELSISDRTILNQVY
                     QDYMDEDDLSLISDELRVKVDSYQDEVQADMTDILEKLYRTGEGSNFIMDLMSSNSLS
                     DTLEQYEVLDSDDYSLLSLETLQAMIQQDLAISSQDYFGDLVHLALQKDLLDQKSHFL
                     QHYVATVMDGIPQERDQRALVLD"
     gene            24277..29754
                     /locus_tag="U1041_000220"
     CDS             24277..29754
                     /locus_tag="U1041_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001890950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEM4767365.1"
                     /translation="MNQEVLLQMMRATIPRDRALLEAFLYYQAEHFDEEWDSLVYQFM
                     TNRQEFKRPVQVLHFETDVSAFVQASPYDTAHDLLTYTQVFGQTGLQKLDKLSTSEKD
                     LVIEVALFNLATRFQLLDSNGHYQTISPDSLLQKSRGANLVNVYRVANNLAERISRDI
                     EQFLLTYEPELETRVEETVQEKEETVDEHKTSVHQAISFREEGSLVIASLDVDLSQLD
                     IRTGKTSHLPAYEELSLRRKFEILTYFDQIRNERSKLPNLRRGDFDTEMEKTPIFDGE
                     ELLTYLEADGSLYELKRTLTTVEEKELEKIGQAIRTENQEKLTQVGIDLSQFDSDQIG
                     ILLDAAGRFHLKNADLALLGGYPNASVTQLALATELLQMGLSHEKIEFFFGSQLSIEE
                     LRQVAYAFLHQELSIEDAEQFEKDKGNQPDLTLRDWKNKLEKAEGKEVVDEAFEVNPL
                     VQMVLDTFPLGSLVSYKGQDFEVVSVSDARLNGLIRIELVNDFSDIIEQNPVLYLRTW
                     EEVSQALHQPKAEPQTELDDEDQELNLFSFLEEETSQSVNEAVQNIGVLDPEQSGEAS
                     HDSEKPTIYVPEEVLVESIPDIPATAFYFPEDMTDFYPKTARDKVETNIAAIRLVKTL
                     ETERRQASTSEQELLAKYVGWGGLANDFFDDYSPKFSKEREELKSLVTDKEYSDMKQS
                     SLTAYYTDPALIRQMWDKLERDGFTGGKILDPSMGTGNFFAAMPKHLREKSELYGVEL
                     DTITGAIAKHLHPNSHIEIKGFETVAFNDNSFDLVISNVPFANIRIADNRYDKPYMIH
                     DYFVKKSLDLVHDGGQVAIISSTGTMDKRTENILQDIRETTEFLGGVRLPDSAFKAIA
                     GTSVTTDMLFFQKNLDKGYVADDLAFSGSIRYEKDSRIWLNPYFDGEYNNQVLGTYEV
                     RNFNGGTLSVKGTSDDLIASVETALHQVKAPRKIDRNEVIINPDVLTKQVIDTSIPAE
                     MRENLGQYSFGYQDSTVYYRDNKGIRVGTKTEEISYYVDEEGNFKAWDTKHSQKQIDR
                     FNALEVTDNTALDVYVTDDAAKRGQFKGYYKKTVFYEAPLSDKEVARIKGMVNIRNAY
                     QEVIAIQRYYDYDKETFNHLLGKLNRTYDSFVKHYGYLNSAVNRNLFDSDDKYSLLAS
                     LEDERLDPSGKSVIYTKSLAFEKALVRPEKEVKKVHTALDALNSSLADGRGVDFAYMM
                     SIYQVESQMTLIEELGDLIMPDPEKYLNGELTYVSRQDFLSGDVVSKLEVVDLLVKQD
                     NRDFNWTHYAGLLEAVKPARITLADIDYRIGSRWIPLSVYGKFAQETFMGKAYELSDQ
                     EVATVLEVSPIDGVITYQSKFAYTYSNATDRSLGVPASRYDSGRKIFENLLNSNQPTI
                     TKQVVEGDKKKNVTDVEKTTVLRAKETHLQELFQDFVARYPEVQQIIEDTYNSLYNRT
                     VSKTYDGSHLTIDGLAQNISLRPHQKNAIQRIVEEKRALLAHEVGSGKTLTMLGAGFK
                     LKELGMVNKPLYVVPSSLTAQFGQEIMKFFPIKKVYVTTKKDFAKAKRKQFVSRIITG
                     DYDAIVIGDSQFEKIPMSREKQVTYINDKIEQLREIKLGSDSDYTVKEAERSIKGLEH
                     QLKELQKLERDTFIEFENLGIDFLFVDEAHHFKNIRPITGLGNVAGITNTTSKKNVDM
                     EMKVRQVQAEHGDRNVVFATGTPVSNSISELFTMMNYIQPDVLERYQVSNFDSWVGAF
                     GNIENSMELAPTGDKYQPKKRFKKFVNLPELMRIYKETADIQTSDMLDLPVPEAKIIA
                     VESELTQAQKYYLEELVERSDAIKSGSVDPSRDNMLKIVRC"
     gene            30252..32030
                     /locus_tag="U1041_000221"
     CDS             30252..32030
                     /locus_tag="U1041_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012678622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HEM4767366.1"
                     /translation="MRTAKTILTVIHERGKQDKPLERVYKLLFNRELYLIAYAKLYPN
                     NGAMTKGVTEETIDGMSIQKIDRIIEQLRRETYYWRPARREYIPKKNGKHRPLGIPVW
                     SDKLLQEVIRMILEAYYEPQFSEHSHGFRPKRGCHTALQEIQTWKGTRWFIEGDISSY
                     FDTIDHDVLITMLSRQIQDGRFIRLIKNMLEAGYLDDWKFHKTISGTPQGGVISPLLA
                     NIYLHQFDKWVGEELIPQYTRGKKQKANSAYNRLSRRIKCYQDKGDYKKAHQLIVERR
                     NLPSVDTYDTSYRRLRYVRYADDFILGFTGSKAEAKAIKKQIGDFLNTKLSLELSQEK
                     TLITHATGESAKFLGYEIKAQRVNDYIDNKGRRSANGVIALFVPASVIESKCRQYMKN
                     GKAIHRNNLLQDDDFSIVQTYQQEYRGLVQYYILAQNLSWFSKVYWYMETSLLKTLAF
                     KHKSSINKMLAKYKTTTTSTNGRTVPCLQVVVPREDKPPLVATWGGISLSYKKKTVIE
                     DAPYQVYGGRTELIKRLLANKCELCGSEENIEVHHIRKLADLNKHNGKLVPKWKEVMS
                     ARRRKTLVTCRDCHHAIHNGSINTRL"
     gene            32123..32635
                     /locus_tag="U1041_000222"
                     /pseudo
     CDS             32123..32635
                     /locus_tag="U1041_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636627.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            32616..32990
                     /locus_tag="U1041_000223"
     CDS             32616..32990
                     /locus_tag="U1041_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
                     /protein_id="HEM4767367.1"
                     /translation="MAKSLFEEMGGKYERQGDYLIPCLTVPAEEEQPIGIWGQRHLDY
                     LKHHCKVTYTNLLTSGRLNAYLADIDRQAQERFERLIEGMKQAQGITEQLKAENALEW
                     TGCLNNIRACAREIVEKEIIFA"
     gene            33357..35276
                     /gene="tet(O)"
                     /locus_tag="U1041_000224"
     CDS             33357..35276
                     /gene="tet(O)"
                     /locus_tag="U1041_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HEM4767368.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAK
                     DGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLPMVYREMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGIRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEERQRLAYVRLYGGILH
                     LRDSVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLP
                     QRERIENPLPLLQTTVEPSKPQQREMLLDALLEISDSDPLLQYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEVEIKESTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTYFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            35328..35501
                     /locus_tag="U1041_000225"
     CDS             35328..35501
                     /locus_tag="U1041_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HEM4767369.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            35990..36502
                     /locus_tag="U1041_000226"
     CDS             35990..36502
                     /locus_tag="U1041_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007392094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4767370.1"
                     /translation="MVKYAPRKVYIRESGGYVELSYTEFCRCRESDQTYMDKLFIPIQ
                     GCLLEVVREQYTDFYRDKERWRYLQKLDTKNRLLSLDGFTDSEGNPLDFITDEAVDIA
                     ETVVNAVMVDRLKAALPLLSDSEQELIQAIFFDGLSEREVGARLGITQSVVNKRKARI
                     LIKLRKIIEN"
     gene            36597..37022
                     /locus_tag="U1041_000227"
     CDS             36597..37022
                     /locus_tag="U1041_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4767371.1"
                     /translation="MAYNHGREDRKWRIWKEAEEKLLRECGVDEATIEQIRMADRADF
                     NSNRRFYRWTNDVAEYLEDMAGRERQAEVGTVAELLEEIESENLYQVLVTVDGRTLKI
                     VLLKMQGYSTKEIAPLVHLTTGAIYARLDHLRKKLRKIL"
     gene            37106..37276
                     /locus_tag="U1041_000228"
     CDS             37106..37276
                     /locus_tag="U1041_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HEM4767372.1"
                     /translation="MAYRVKAYTLREESTESGTRYFISFKDGQGKSHELEVSEQFFME
                     FRQMERRNRNLF"
     gene            37733..38758
                     /locus_tag="U1041_000229"
     CDS             37733..38758
                     /locus_tag="U1041_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015521636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4767373.1"
                     /translation="MQKLQTVNAETLLYEPLEKPSFVVDSLIPTGLSLFCGSQKIGKS
                     WLMLKLCLCVSQGIPLWDMPTMEGDVLYLCLEDTFCRIQDRLFRLTDEASGRLHFAVA
                     SCKLSDGLIVQLEDYLKDYPDSRLIVIDTLQKVRTASKDNAYASDYGDISLIKDFADR
                     HSLAVIVVHHIRKQNDSDVFNKVSGTTGLTGSADATFVLEKEKRASDTAKLYVTGRDT
                     PYQEYTLRFRDCRWELVERKTQEQLAKETIPDVLFRLVDFMRDKEEWIGTATELLAAM
                     GETETIPTVITKWLNEYRTTFLSENRICYQYSRRKDGRRIALARRAGDSGDGGDSDIR
                     IPPCYCH"
     gene            39283..40248
                     /locus_tag="U1041_000230"
     CDS             39283..40248
                     /locus_tag="U1041_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002569195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HEM4767374.1"
                     /translation="MPYAILRFQKRKAGGVAACERHNERKKEAYKSNPDIDMERSKNN
                     YHLIAPPKYTYKKEINRMVAEAGCRTRKDSVMMVETLITASPEFMNQLPPEEQKAYFQ
                     TALDFISERVGKQNILSAVVHMDERTPHMHLCFVPITPDNKLSAKAILGNQKSLSEWQ
                     TAYHERMSSRWNQLERGQSSMETKRKHVPTWLYKLGGRLDKQYEEIVSALSDINAFNA
                     GKKRDKALDLLSAWLPDVEKFSKEIGKQQAYIDSLKERIGQESDYAGRMRDEKYEQEL
                     KVQKANQKIFELQRTNEQMGRLLSKIPPEVLEELQKNHRSRAKER"
     gene            40257..41111
                     /locus_tag="U1041_000231"
     CDS             40257..41111
                     /locus_tag="U1041_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002596257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEM4767375.1"
                     /translation="MKKQDFKVLKTKDLYPFPDNPFHVAEDETLSELAESIKEFGIVT
                     PIITRPKEDGDGYEVIAGQRRVRASELAGINTVPAFVLPLDRDRAIITLVDSNLQREN
                     ILPSERAFAYKMKSEAMKRQGFRTDLTSSQVVTKLRTDDKVAQGFGVGRMTVQRFIRL
                     TELIPPILQMVDEGKIALTPAVELSFLKKDEQENLFATMESEEATPSLSQAQRMKQLS
                     QSGRLDMDTIFAIMTEEKGNQKETLKINTSKLKKYFPKNTTPKQMEETIIKLLERELQ
                     RKRNRDSR"
     gene            41157..41387
                     /locus_tag="U1041_000232"
     CDS             41157..41387
                     /locus_tag="U1041_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001206986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767376.1"
                     /translation="MREIQYEIVKEIAVLSTGDSGYTKEINLISWNGKEPKYDIRSFS
                     PNREKCGKGITLNADEAAALLKALQKELNSED"
     gene            41387..41650
                     /locus_tag="U1041_000233"
     CDS             41387..41650
                     /locus_tag="U1041_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000253176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein R"
                     /protein_id="HEM4767377.1"
                     /translation="MVSDWQGGDISKLFPALSGKEDLSMGEDKKADKKRKRIVPKAPV
                     QMIISREYVGTQTVTEAFVPIISEDIRKKIAEGDTFDNEGLSA"
     gene            41705..43561
                     /locus_tag="U1041_000234"
     CDS             41705..43561
                     /locus_tag="U1041_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004844629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4767378.1"
                     /translation="MAGIKEEKKIYLVGIYCRLSKDDGTDNESASIATQKSILTDYVK
                     KQGWHIAKTYVDDGYSGTNFQRPSFQNMIKDIESGLINCVITKDLSRLGRNYLDCGLY
                     LEVFFPEHNVRYIAVNDGVDTLNKSAMDITPFRNILNEMYAADISVKIKSAYRARFQQ
                     GKFMGTTAPYGYIKDPADHNHLLIDDKVAHVVKEIFDLALKGNGVAKICRHLNKQHIL
                     RPAAYAAERGETGFERHFEGNEDKRYIWSGNSVRSILRSPIYAGNLVGYKRIAANMKS
                     KKRPSKLPEEWEVIPNTHEGIVTQEEFDIVQQLITSRRLPQNKGGFVNIFAGVIKCVD
                     CGCALRAMNVHRRKRPEIIDCVQYSCNNYARNGRSECSAHNIEARDLFNAVLADINCF
                     ADMAVNDEKAVRAIEKRLTETDQSRAKALEKERKKLNKRLAELDRLFSSLYEDKVMER
                     ITERNFEMMSGKYQKEQLEIEARLKEVTETLNESYEKSRGIRDFLALIRNYQGLKELD
                     ATVINALIDKILVSEREKMADGTVKQEIKIYYKFIGFVDELHIIPTKRWAAMPAKNCT
                     VCGVEYVPGSGASRYCPACAKKIRREKSNESKRRSREQKRIACMNCPQKMTD"
     gene            43624..44700
                     /locus_tag="U1041_000235"
     CDS             43624..44700
                     /locus_tag="U1041_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEM4767379.1"
                     /translation="MTRIKAVKQKAILNVAESLGYSFRRLSGHIYEHPDHDSFRIFAD
                     TNTFKWFSRDIQGDVIDFVQLVAGVTFKEAVSYLETGDFEQAKLIEETYQPFQYYLHE
                     EPFQQARIYLKDIRGLSDQTINTFGRQGLLAQATYQSEPVLVLKSYDHNGTLQAASLQ
                     GLVKNEEKHDRGYLKKIMKGSHGYVGISFDIGNPKRLIFCESVIDMMSYYQLYQKQLS
                     DVRLISMEGLKLSVIAYQTLRLAAEEQGKLAFLDTVNPSRLSHYLQAIQETTTFFQTH
                     SNALTLAVDNDEAGREFCQKLSDKGLPLSQDLPPLQGLETKSDWNDIVKQQSELSLSD
                     CIQTAQAQVNKNHPPPKRERAMAL"
     gene            44754..44981
                     /locus_tag="U1041_000236"
     CDS             44754..44981
                     /locus_tag="U1041_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767380.1"
                     /translation="MSVIERLAEKVARQEEKVSRETEKLEHYRDQLQTAMYSTFIKRQ
                     QSSQLSFHEALEQAFGKETTLQPNYRNEDIK"
     gene            44978..45346
                     /locus_tag="U1041_000237"
     CDS             44978..45346
                     /locus_tag="U1041_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEM4767381.1"
                     /translation="MSKTWNFDQPLDDVKPTSSHEERAKIAALFHQQDERPIEEVDYV
                     AAFEQQQKESKYKDDQTLASTVKQSQPKKVNITSDYKQHLADTIAQNNKDISACQKQI
                     EELHQLIDEKKIQNKKLQAI"
     gene            45417..45707
                     /locus_tag="U1041_000238"
     CDS             45417..45707
                     /locus_tag="U1041_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000667954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767382.1"
                     /translation="MRFFQKKIQNQDRFKQLIHRLSEMSDTELTKVEKLLDVVFDPSF
                     KSSERVEISRNYITTEEQSLDKSIQEAKNKLNTEQLEKRIEQFKQSKKPKNG"
     gene            45777..46253
                     /locus_tag="U1041_000239"
     CDS             45777..46253
                     /locus_tag="U1041_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013851913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767383.1"
                     /translation="MIGDNIKSLRRTHDLTQPEFAKMVGISRNSLSRYENGTSTVSTE
                     LIDRICQKFNVSYVDIVGEDKMLTPVEDYQLTLKVEVIKERGAAILSQLYRYQDSQDI
                     AFDDESNPWILMSDDLAELINTKIYLVDTFDEIERYNGYLDGIERMLDMVHHRVVA"
     gene            46253..47020
                     /locus_tag="U1041_000240"
     CDS             46253..47020
                     /locus_tag="U1041_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HEM4767384.1"
                     /translation="MRLEEFSEAEFQKALQQTIRALTRGKTIPDRPKAILLGGQSGAG
                     KTTIHRIKQKEFQGNIIIIDGDSYRSQHPNYLALQEKYGKDSVDYTKGFAGKMVEQLV
                     DELSTQGYHLLIEGTLRTTQVPRQTAQLLASKGYQVSLAVIGTKPELSYLSTLIRYEE
                     LYAIDPTQARATPKEHHAGLVENLVDNLKELEREQLFDQIQIYQRDRTCIYDSAIDEG
                     SAAEVLQECLFGKWSKVEEEMVKESELLLNELLEKNK"
     gene            47056..49563
                     /locus_tag="U1041_000241"
     CDS             47056..49563
                     /locus_tag="U1041_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001213956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecF"
                     /protein_id="HEM4767385.1"
                     /translation="MRGFNNKIKSVYRELTNTKEKFGSFHKTLIHLHTPVSYDYKLFS
                     SWTSTKYRKSTEDELFDIFFKNKKIKVDKTKFFSSFDKVVFSSPKEYISFLLLAEAIL
                     KNEIEIVVVTDHNTTKGIKKLQTAVSIITRTYPTYNIHPHILHGVEISAADKLHIVCI
                     YDHEKESWVNQWLCENIISEKDGSYQHSLTIMKDFNNQNIINYIAHFNSYNILKKGSH
                     LSGAYKRQVFTKENTRFIGVKNINSVEGSKNRLLTDFNCEPNFLLDNDSHDIDSVGKN
                     NMWIKGGKISFKMFQEALLDYTVSVSLFEPNFEQKSYIKGLYIQSRGGDRSFLTGDKL
                     EKDRDFFLTFSPSMNCLIGGRGTGKSTLIDMLQFVLSQDCDKQSKLEFLCNHANAFVL
                     YVLEDAEYIIEVSLPDVLQENKDNILQYYGQNRENRYGYPYNCNSDSIKEWTRSQYTK
                     VYKVEGKFFKLVDKTRILEKMFDRRYSVNELVRTADGEKITEFISDLMLKNKNLPRPN
                     YGLRTQTLESFEAKLQELDKYRRVRKDSILKIIDDFNQTQVGKLRICYEQIDRWEVPD
                     FESTLFKSNSTLNFSFENYRISKRDVADILYLVYQELGIKGFVNVILKQNIPNRYFIL
                     LKNISEENFAKHENKWRNNSEINDSNIPYLKTSIYSLIANSSLLDELKRVLKEHVANE
                     RLFLEFNINSKETSQHLDILYKEVSVLSLGQKVVAMLDFLLAYSDYSKDFRPLIIDQP
                     EDNLDNRYIYRHLVQQFRDVKAQRQIILATHNATIVTNSMTDQVVIMESDGAHAWIES
                     QGYVSEKFIKNHIINQLEGGRDSFKHKMSIYETALSE"
     gene            49898..50257
                     /locus_tag="U1041_000242"
     CDS             49898..50257
                     /locus_tag="U1041_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767386.1"
                     /translation="MGQEIKLIRKQFRITRQEEKQIKEMMREQKVGSFSEFLRQNLLK
                     KNYQDRIFESWFSLWQSQKFEQISRDVHEVLVVARENHQVTQEHVSILLTCVQELIAE
                     VNQVQPLSREFREKYMR"
     gene            50267..50632
                     /locus_tag="U1041_000243"
     CDS             50267..50632
                     /locus_tag="U1041_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HEM4767387.1"
                     /translation="MVYRYRTNLKKVFLTDSELHQLNERIAKSHCQNFSVYARKVLLN
                     PNMSFVTINTDTYDQLVFELRRIGNNINQIARAINQSHLISQEQLQELSKGVSELITG
                     VEKEFQVEVKRLREFHGSH"
     gene            50619..52478
                     /locus_tag="U1041_000244"
     CDS             50619..52478
                     /locus_tag="U1041_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEM4767388.1"
                     /translation="MVVTKHFATHGKKYRRRLIKYILNPGKTDNLKLVSDFGMSNYLD
                     FPSYEEMVEMYNVNFTNNDKLYESRNDRQEKHQQNIHAHHLIQSFSPEDNLTPEEINR
                     IGYETMMELTGGRFRFIVATHTDKDHVHNHILINAIDRNSDKKLIWNYALERNLRMIS
                     DRISKMAGAKIIEKRFSYRDYQKYRKISHKFELKQRLYFLMQQSKSFDDFLEKAEQLH
                     VHIDFSQKHSRFMMTDRSMTKPIRGRQLSKRELYDEDFFRTYFAKLEIENRLEFLLNR
                     VNSLEKLLTKAKELNLTIDLKQKNVTFILEKNGKQICLNHKKISDKKLYDVNFFQDYF
                     KNKEVGDSGGLENLKEQYHAFQEERDKDKVSTKEIEEAFETFKETRDAVHEFEVELAG
                     HQIEKLVDEGVYIKVSFGVKQSGFIFIPNYQLDILEEENQTKYKVYIRETTSYFIYNK
                     EHSDKNQYIKGRTLIRQLTNDSRAIPYRRPTVERLQEKITEINLLIELTETDKRYQDV
                     KDELVAEIAELDVKLNQTNEKIATLNKMAEVLINLKSDDPNSRKLARYDFSKLNLTES
                     ITLEQVTEEIKLLQEKFSLYLDEYEGLVSRIERFVKILNTDIDLKFQENVSLE"
     gene            complement(52601..53956)
                     /locus_tag="U1041_000245"
     CDS             complement(52601..53956)
                     /locus_tag="U1041_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM4767389.1"
                     /translation="MNIFKKNILKFILSFIFIIMVDIVLLTVAANYIRSQQSASNIIE
                     TVSSEIVLSDGNYTVSQKAKELIDNNNLWIMIIDKNSGKEKFNIDKPKDIANQFDFAD
                     VIRFSRFYLKDYPVFTQIKENDQDIYIIAFPKDSIIRYSNNYFDLSRIQIFPIIILSI
                     IFANILFCLILYIYSITFLDRNIKPIISAIVKLPNGVNTQVKSVKELDKLTFAINSAN
                     QKLRENEEFKEDWISGIAHDIKTPLSVIVSNISLAIEKTDNDTLLKYLTPTLVESHYI
                     QNLLNDLNIFARLTNGNLILKQEIIYIIPFFKDIIIQIINQEIWHDFNFEFTADENLY
                     NKKMYVEKSLVSRIIHNLIYNSVLHNPSGCDIQIILKSLTNDRFLITILDNGVGTSVD
                     RLNNINKIEEFNFDISGVRRSGIGLKITKQIVDLHGGDMFISSQQGEYFQTTITLDSI
                     G"
     gene            complement(53972..54670)
                     /locus_tag="U1041_000246"
     CDS             complement(53972..54670)
                     /locus_tag="U1041_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002294154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4767390.1"
                     /translation="MGFEIQLLNKHILIVDDDIALSESIKEVLMSRGFKNISFAYSIS
                     EGIDIFSVSQIDLIILDVMLPDGEGYLLSKYVRKTSDVPILFLTAKNNPDDEINGLDS
                     GGDDYVTKPFLPKSLTYRIMALLRRAYRDESELIELTDCTIDLNNASVKKSNQNFSLT
                     PTEIQILRKLFTNKNYIVSTETICDTIWGLDSFGYEKSLMVHIRNIREKIEIIPSKPK
                     HLITVKGLGYKLAI"
BASE COUNT        17892 a         9982 c        12096 g        15079 t
ORIGIN      
        1 gaaaaaaata ttaaaaaaat aggagaaaag tcttgcatta ttgaaaatac tgtgttatga
       61 ttattgaggt ttgaaaaaac tgacctaaga cagtagggga gctagactcg taaacatcct
      121 accgaggcac aaaacgatta ttgagataaa cgtatttgta ctttcgtgtc taggtttagg
      181 tacgattttt ttgtgcctag cccaaaataa aaacggaggt aaaaaaatga gtgaagctat
      241 tatcgctaaa aaagcggaat tagtaaatgc cgttgctgag caaatgaaag ctgcaacatc
      301 tatcgttgtt gtagacgctc gtggtttgac agtagaacaa gatacagttc ttcgtcgtaa
      361 cttgcgtggt gcagaagttg agtacaaagt tattaaaaac tcaatcttgc gtcgtgctgc
      421 tgagcaagct ggtcttgaag gtcttgcaga attgtttgta ggtccatctg cggttgcatt
      481 ctcaaacgat gcagtagccc cagctaaaac aatttacgat ttcgcgaaaa ctgctgatgc
      541 tcttgaaatc aaaggtggag ctgtagaagg taaagtttct tctaaagaag aaatcgaagc
      601 tcttgctaca ttgccaaacc gcgaaggcat gctttctatg ttgctttctg tacttcaagc
      661 accagttcgc aacgttgcat acgctgtcaa agctgttgca gaaaaagaag acgcagctta
      721 atgtgtcaga gcgtagctgc ttagtgctac aaactattta aaaacctaaa ttggaggaaa
      781 atcacaatgg cattgaacat tgaaaacatt attgctgaaa ttaaagaagc tactatcctt
      841 gagcttaacg accttgttaa agctatcgaa gaagaatttg gtgtaactgc ggctgctcct
      901 gtagctgttg ctgcagctgg tggtgctgct gaagaagcta aagactcatt cgacgttgaa
      961 ttgacatctg ctggcgacaa aaaagttggc gttatcaaag ttgtacgtga aatcactggt
     1021 cttggtctta aagaagctaa agagcttgtt gacggtgcac cagctatggt taaagaaggc
     1081 gttgcaactg cagaagctga agaaatcaaa gctaaattgg aagaagcagg cgcttcagtt
     1141 actcttaaat aagagtcaca tcataattag attgcggaat ccctatttac cagtctttga
     1201 gagcgataag cgattgatag aaactgataa attgatttgg tttcctgcca aaaatcctgc
     1261 caaaaattct ttggcaggat ttttgtttta ataaactttc ggggctagac attaaattgt
     1321 ctaccccttt ttttgcgttg tggaggtaat tatgcaaaag aaggaacaat catcacgtca
     1381 aatggtgatg tgtcatctcg tggctatttt aggagttgat attgagaaag caactcatct
     1441 ggttgatgaa atggaacaag taggtttaat ccgatttgat gaatttggaa atgttggaat
     1501 tttagtcttg gagggacaat catgaaacga attaccgcta atcaatatca gacatcagag
     1561 cgttattata aactcccaaa agtcttgttt gagagtgaac gttataagga tatgaagctg
     1621 gaggttaagg tagcctacgc ggttttaaaa gatcggttgg agttgtcttt gagtaaaggc
     1681 tggattgatg aggatggggc tatttatttg atttattcca attcaaatct gatggcacta
     1741 ttaggctgtt caaagtcaaa actactctct atcaagaaaa ccttacgcga atatggctta
     1801 attgatgaag tccaacagtc ctctagtgaa agaggtcgaa tggcaaataa aatttacttg
     1861 ggggaattag aacatgaacc taccccagtc ttacatacag acggggctag tgttaaaaaa
     1921 acactagggg ggtctcaaag aaagacgggg ccggtcttat attcagcccc tagtgagact
     1981 gaaggaagtg agactaaata tagtgaaact aaagggagtg atttccttat tgaggacgag
     2041 gaggaaaggc agctggtaga tgagaaacaa gaagaaaact ttatttcaaa agttgatggc
     2101 gtgaccaagt acgatcgaga ctatatttgg ggtttggttc atgaccagtt aagacagaca
     2161 ggtctatctc agtcagctag tgactatgcc atgatttatt ttagtgaccg ttatcagtat
     2221 gcactggaac atatgcgatt tgctcggtca gcggaagtaa tagctgaata cgtatttaat
     2281 ggagtgctgt cagagtggac caagcaactg agacgacaag aagtaaaggg aggtgaataa
     2341 agtgatttgg tggatactag gtggaatcta tctgatttct atcatcattt tgattgttga
     2401 aatcatccgt gcacctgaaa tggatgatca tatataagca agagttttac aagtgtaagg
     2461 ctctttttta gttggaaaga gaggaaaaat gaaattttta gatttatttg ctgggatagg
     2521 cggttttagg ctagggatgg aatcacaggg tcataaatgc ctgggctttt gtgaaattga
     2581 taaattcgcc agaacatcct ataaagccat gtttaacaca gaaggagaaa tagaatacca
     2641 tgacattaaa gaggtcacag accatgactt tagacaattt agagggcaag tggaggttat
     2701 ctgcggggga tttccttgcc aagcattttc actcgcaggc agacgattgg gatttgaaga
     2761 tactcgaggg actctctttt ttgagattgc tcgagcggcc aaacaaatcc aaccacgttt
     2821 tctatttttg gaaaacgtca aaggcctact caatcacgac gagggacgga cgttctccac
     2881 aatcctctcc acgttggatg aattggggta tgatgttgaa tggcaggtgc ttaacagtaa
     2941 ggacttccaa gtcccgcaaa atagagagcg ggtctttatt attggacatt ctagaagata
     3001 ccgtcccaga ttcttatttc ctctcagagg agaaaacagc ccagctcatc ttgaaaggct
     3061 aggaaatatc aatccctcta aacgtggttt gaatggtgaa gtctatctga cgaatggact
     3121 tgctcctaca ctaacaagag gtaaaggaga gggagctaaa atcgccattc cagtcttaac
     3181 accagataga ctagaaaaac gccaacatgg tcgtcgactt aaggacaatc aagaccctat
     3241 gtttactttg actagtcaag acagacacgg agttgttgtc gtaggaaatc tgccgactag
     3301 ctttgaccag actggaagag tatttgacat atctggcttg tcaccgactt tgaccactat
     3361 gcagggtgga gacaaggtgc caaagatttt actgagggag gagctgccat ttctgaaaat
     3421 caaggaagcc acaaaaacag ggtacgcaaa ggcaactctt ggagactctg tcaatctggc
     3481 ttatccagac tcaaccaaac gtaggggacg tgtgggaaag gggatatcca atactctgac
     3541 gacttcagac aatatgggag tggtggttgc tgctctggaa tatcgacagg ataagtggta
     3601 tgaagtcaca ggcattgtct tagaggggaa actttatcgc ctgagaataa gacgactgac
     3661 accaagagag tgttttagac tgcaaggctt tcctgattgg gcttttgaca aagcagagag
     3721 tgtttctagt aagagccaac tatacaaaca ggccggcaat agtgtaacgg tgacggttat
     3781 tgaagccatt gccagagaat ttagaagaat ggaagaggaa gaaaaacatg aacctactac
     3841 ataagaaaag tattctagag tgtaccgaat tagaagaacg tattcaccaa gttgaaacca
     3901 atcagttatt acaaaagata ctgtcgctcc ccaattttga ttgtgacttt gaggtgactt
     3961 ttgaagatga ttaccacaaa gagatgaatg atcccctatt ctacgaatcc aatcttcatc
     4021 ggatttcgga ttttatggaa actagggata ttaaaaatgg tgtagataca ctattgacga
     4081 aagacaatca cttggccttt cgtgcctttg gtgaaaatta ttctgctagg ggaaaggagg
     4141 gcattttaac gactttagtg acggtcaagt gctttggtga aggacggatg cccattgata
     4201 tgagtcgcta tttctcaact cctgaaccaa cagttgaaga tagcctaacc ctataaggag
     4261 gtgcctatgc ttgaggtata tctaggaaat aatgccaata caaatcaaga tttactaacc
     4321 attttgacga cctatggtgt gacttatcgt tgtataaaag cgtgtgatgt aaaccgtgaa
     4381 atcttactgt cactcttcgc caaaaccacg gattgttttg agttgctgtc gccacgattt
     4441 cttcgcttta aacgtcaata ttcgataagt ttgaatgaga tgattcagct cattctccaa
     4501 aagccagacc aaaaccttcg tctgcctctc attgtctgtc agaatcacgt ctatccagcc
     4561 attgggctag acgaagtgcg tacctttctt cccagacaag taaaagaaga gctgtttcag
     4621 gccagtctga tgaaacaagt gacagggtag gtgtgaagat gaatgaacga ttttgggata
     4681 atttagaaat catactctca gaaagagaaa tcacttgggc agaactagct cgcaaagtat
     4741 tcaaaggtca atatgtttat ccaagtgaat ttaatcgcct ctatcaaaaa ttacggcatt
     4801 acaaatctaa tcgtctgatg ccacaaacaa gatgggttga gcgaatcgtt ctagtcttag
     4861 atattgatta tgaagattta ttcaagaggt gacaatgata aggatagtgg tgttttatct
     4921 agccatactg cttaacggac ttctggtgag tttatgccta caagactata tgtcgattaa
     4981 ggtattagtc ttgctacaat tggtcctatt aagtgtgact tgcttagaga ttgcccgtca
     5041 taaaactctt caagcaaaaa aaataacctt aagcaatcgt ctaagatggt tgcttcttgg
     5101 ttttgtgtgt atggttgctt ttgcagtctt catcagcttc ctatttccag ttcagtctag
     5161 gaatcaagcg gtcttgttac aagtaggaaa acaggttcct cctattatct ttttattgtt
     5221 tctggtcaat gcaagtattc ttgaagagat tgtttacagg caattgctgt gggaaaaatt
     5281 gacattccct tttgaacaaa taggcgtgac cagttttctc tttgttctat cccatggacc
     5341 taatcagtta gggagttggc tcatgtatag ctgtcttggc ttgaccttgg ctgttgttcg
     5401 attgaaaact gattgtatga cggcaatcgc cttacattta ctttggaata gtttggctta
     5461 tgtcgtaact ttcttgtgat accaaaatca agagtgcttc cgtattatgg aaacacctta
     5521 tgtttgatag ggaatcgaaa aaaagaggag gtcaccatgt catctgaaca acaagaacgt
     5581 caagcgatgc aatacgtgga aagaagtagt ttattgacag tcagaaccct cttaaagctc
     5641 ttagaatggt cggctaggca agccttagct caagattcag cttataagat tggggttcaa
     5701 aaactggaag aactccttca aagcccttac gcaattgaag cgatagatgt tagtaaagac
     5761 atactggata agccaatcga tgtggagaaa tttaaggagt tgatggagtc agaaaaactg
     5821 ccaatcgcaa ttagttggca aaaagactat ctctactttt atgccaagga taagaccttg
     5881 ctcgatcatc acttggatga attgttgaag aaactgatgt ctaatccaga gaagctagaa
     5941 ggtttaacct ttgataaaac cttggatcaa gagatagaac tggccaaaga gaaaattaga
     6001 gtgacagaac cttcggcagt caaaaccaag gaggtgacct tgtaatgtat tcaagacgaa
     6061 aagctttagt ctttggactc atggggctcg cctttggtta tttctgccat cgtctaaccc
     6121 tgctctatga tagtttaacc aatgccccac ctatggaacg ttttgcctac ctcttaggag
     6181 aggggctaaa tcaagtcttc aatcctttat ggctattttc ctttactcaa aaatctcttc
     6241 ttgcctttat ccttggggtt ctaacgatga cactagtcta tctttatgta tcgacaggac
     6301 agaaggtcta tcgagaaggg gaagaatacg gttcggcacg atttggaaac agtaaggaaa
     6361 agcggaactt ttacagtaag aatcctttta atgacacgat tttggctcgt gatgttcgtc
     6421 taaccttgtt ggaaaagaag aaaccacagt ttgaccgaaa taaaaacttg attgtcattg
     6481 ggggttctgg ggcaggtaag acctttcgct ttgtgaaacc caaccttatc caacttaact
     6541 gttccaatat tgtcgtagat ccgaaagacc atttggctga gaagacaggt aaactctttt
     6601 tagagaacgg ttatcaggtc aaggttttag acttggttaa tatgaccaat tcggacggtt
     6661 ttaatccctt tcgttatgta gaaacagaga atgatttgaa ccgcatgtta acggtctatt
     6721 ttaataatac caaaggaaat ggttctcgca gtgatccgtt ttgggatgag gcttccatga
     6781 cattggtgag agctattgcc tcttacttgg tggattttta caatcctcca ggaagttcca
     6841 agcaagagca ggaagcaaga cgtaaacgtg gccgttatcc agccttttct gagattggta
     6901 aactcattaa actcttatca aagggagaca atcaggacaa aagtgttctt gaagtcctgt
     6961 ttgaagatta tgctaaaaaa tatggtcacg aaaactttac catgcgaaac tgggcggatt
     7021 tccaaaacta taaggataag accttggatt cggtgattgc ggtcacaaca gctaaatttg
     7081 ccctttttaa tatccaatca gtgattgatt tgacgcaaag agacactatg gatttgaaaa
     7141 cgtggggcac tcaaaagacc atggtctatc ttgttattcc agacaatgat acgacctttc
     7201 gttttctatc tgctttattt ttctctacgg ttttctccac tttgaccaga caggctgatg
     7261 tggactttaa agggcaactg cctattcatg ttagaagcta tctggatgag tttgcgaatg
     7321 tcggagaaat cccagacttt gctgaacaaa cctcaacagt tcgctctagg aacatgagtc
     7381 tagttccaat cttgcaaaat attgctcaac tccaaggact ttataaggaa aaagaggctt
     7441 ggaaaactat actggggaac tgtgacagcc tcctctattt gggtggaaat gacgaggaaa
     7501 ctttcaaatt tatgagtggt ctattaggta aacaaaccat tgatgtcaga agtaccagtc
     7561 gttcttttgg gcagactggc tcaagttcta cctctcacca gaaaattgcc cgtgacttga
     7621 tgacggctga tgaagtcggg aatatgaaac gagatgaatg cctcgtacgc attgcaggag
     7681 ttcctgtttt tcgaaccaag aaatattttc cacttaaaca taagaattgg aaatggcttg
     7741 cggataagga aaccgatgta cgctggtggc actatcatat caatccccta accgctgagg
     7801 aagaggtaga tttgtcaggc cataaaataa gggatttaag cacagaaacg acactacatt
     7861 aatagaaatg aggaattata tgaatcaaaa actaacaggc tttgtttacg gagtggacgc
     7921 cagctccatg ttctcccaag ccatgtctct attacaaaaa ggcttaattg cagtaggagc
     7981 ctttcttgtt gtcatgggca ttatcaacct ttcaaccaac attaaagatg gtgggccagg
     8041 tgtccgaaat gccattctag aaattgttgg tggggtcatg gtgggagccg ctggtgcttt
     8101 tgtgactcag attaccattt aggggaggac agcacatgac atgataatga attttacatc
     8161 accttttgta tatctagcct ctgaaaaagt atctagcgac agcctttttg aagggtttca
     8221 agtggattta gaatcaaccg ccaacttggt taagtcacta gcggacttta atccgacggt
     8281 gtggtcttac atgacagcca ttaccaaggg gattatgcaa cccttgggag tagctattct
     8341 tgcggttgtt ctcgtactcg aattttcaaa aatggccaag aaaatcgcaa actcaggtgg
     8401 tgcaatgacc tttgaagcca tggcacctat gattgtcagc tacatcatgg tcgcggtcgt
     8461 gattaccaat acgacggtta ttgtggaagc cattattgcc cttgcctctt atgttattga
     8521 acaagtggca agtcttgtca cgaatggtgg tgctaattat gataccatct caggcattaa
     8581 gggatctgga attgtaggaa aaatgattat tggctttttt gcgattctca tttggttggt
     8641 acgaatggcc agcatcatgg ttgtcaatat cttgattacc attcgcttta tccaactcta
     8701 tctgatgatt ccttttgccc ctgttaccat tccgaccttc cttagtgatg actggagaag
     8761 tgttgggatt ggttacctta aaaatatcat ggtctatgcc gttcaaggta ttttgatttt
     8821 tctaattgta tctcttgttc ccttgtttga atcggctgga aagattgccg tatcaaatgg
     8881 agctggagtg atggaatcac tcgccattat gtttggtggc ttggtacagg ccatattgtt
     8941 aatcattgcc ttggttggca gtcaacggac cgcccgaagt attttgggga tgtaggagga
     9001 tgggagtaaa ttgcccgcct cctcttttta tagcttattt agattggaga acatttatga
     9061 acacacgtgt ctttaaggac atttcaaagg ttcaacacag ggcatggtta ggatttacaa
     9121 ctagacaggt tatttttgta tttccagccg tcgccctaac cattttggta ttgggcttga
     9181 acctatttta ctggcaattt ggggattggt ttgtctatgg ttttgttttt agctttacta
     9241 ttccactcat gttatttggg gtctatagac ccaatgactt accatttgaa acctatctca
     9301 agtaccgttt tcattatgaa ctaacggtgc cagaccgcac atttactgga agaaaaggag
     9361 accaacgtga aaaaattaaa acactcaatg aaaccaaaga catcttctaa tgaccaaaag
     9421 caaaagacga aaacacagaa gcaggagatc agaccttcta ccgtaaatac gttagcctat
     9481 caagggcttt ttcagaatgg ccttatgcag gtcagcccaa gctatttctc acaaacctat
     9541 ctcttaggag atgtcaatta tcaaacagtt ggcttagacg ataagggagc tattgttgag
     9601 aaatattccg atttaatcaa ttcactggat gataagacca atttccaact gactattttc
     9661 aatcaaaaag ttaatttgga aaaattccgt aagagtattc tctatccctt acaggaagat
     9721 gggtttgatg cttatcgtga tgaattgaat cgcatgatgg atgccaactt agaggcgggt
     9781 gagaacaact tttcagccgt caagtttctt tcatttggca agagcgacca aacaccaaaa
     9841 ctagcttttc gttctctgtc acaaattgga gaatatttca agagtggctt ttcagagatt
     9901 gatgtatctc ttggtttgct cggtggagag gagcgaataa atgtccttgc ggatatgtta
     9961 cgaggcgaaa atcatttacc gttctcttac aaggatttga cgctctcagg tcaatccacc
    10021 aaacacttta ttgccccaac ctacctttcc tttaaacaca agaatcatat tgaattggac
    10081 gaacgattat tacagattgt ttatgttcgt gactatggca tggagttagg ggataaattt
    10141 attcgagacc tcatgcagtc agatttggaa gtgatgatta gcctacatgc caaaggctct
    10201 accaagtctg aaaccatgac caagctacga accaagaaga ccttgatgga atcacaaaag
    10261 attggtgaac aacaaaagat ggctcggact ggaatctatt tggagaaggt cggccatgtt
    10321 cttgagaaca acatcgatga agctgaagct cttcttcaaa ccatgaccca aacaggagat
    10381 aaactgtttg acaccgtatt tctaattggc gtgctggcgg atactgaaga tcaactcaaa
    10441 caatctcttg atattatcaa gcaagtggcg gggtcaaatg acatgattat tgacaacttg
    10501 acctatatgc aagaagcagc ctttaacagt ctcttgccat ttgggaagaa ctatcttgaa
    10561 ggtgtttctc ggtctctatt gacttcaaat attgccgtga atgcaccttg gacttccgtt
    10621 gatattcagg acaagggtgg gaaattttat ggcatcaatc agatttcaag taatattatt
    10681 agtattgacc gtggcaagtt aaatactccg tcaggtttga ttttagggac ttctggagcg
    10741 ggcaaaggga tggcgacaaa acatgaaatc atctctacaa agctcaagga agcagatagt
    10801 gatactgaaa ttattattgt tgacccagaa aacgaggtgc gacaagaagt cgtgttgtaa
    10861 attgctagtt tagctactct atccatttgg ggtaatccta ccacagcctg cttgactggt
    10921 aacggttatg ttgggaagcc tgtgggacaa tatggaaagt ctgatagcct aaaatcggat
    10981 ggactgttag gataagaata ctatggtgaa cagacgtgaa ccatcgcaag agtcgttaca
    11041 gggactaagt gaaataaggc tgatacactt acaccaaaag gtacggagga ggtcattggg
    11101 gctttcataa cctgatgaca aatggacaca ttcttcccgg ctcaaagatg gcacctaagg
    11161 tattcacaat tatttataac acggaacttg gtaagcccta tgtattcctt ttaatcgata
    11221 gaaggtattg aactcgtaag agggatagac gatacagagg gtagaggaaa ggataaaaag
    11281 cgaatgctcc aactgtaatg gtaggagata ggggttcaaa ctttgccctg acctgaaagg
    11341 gtgcagactt atcctatggt atttcatgac aaaaatggag gtaaacctat gaatgataaa
    11401 cattcaacga cagcaccagc tgagaagtta tcacacaagc aactgcttgc gaaacaatgg
    11461 aaaagcattg attggaagag agcagaacaa gaagtgaata ggctacaaat caggattgtc
    11521 aaggctactc aagccaaaca cacaaacaca gtgaaaagac ttcaatattt actaacccat
    11581 tcgttctatg ccaaggcact tgccgttcgt cgagtaacga ctaacaaagg caagaaaaca
    11641 gctggtatag acggtgaact atggacgaca cctactcaaa agatggaggc tctcctatct
    11701 ctaactgaca aaggctataa agccagtccg ttaagacggg tttacatcga caaaaagggg
    11761 aaaaagaaga aacgtccatt agggattccg actatgtacg acagagctat gcaggcactc
    11821 tatgctttag cattagaacc tgttgcagag acaactgcgg atactaaatc attcggcttc
    11881 cgaaaaggaa gaagctgtca agatgcttgt gaatatatct tcacagcact atcacgaaaa
    11941 gcttctcctc agtggatttt agaaggcgac atcaaaggct gttttgacaa catcagtcat
    12001 gactggctct tagagaacat tccgatggat aaatctatct taaaacaatt ccttaaagca
    12061 ggttttgtgt tcaagggtga gttattccca acggaagacg gcacgccaca aggcggtatc
    12121 atttcgccta tccttgccaa tatggcactc gatggattac aacaagtctt atcagacaga
    12181 tttcatacca atcgtttagg aaaaaccgac cttcgattca aaaatagcca taaggtcaat
    12241 cttgtccgtt atgcggatga ttttatcgtc acagctgcga cacaagaaat tgcattagag
    12301 gctaaagaat tgattagaga gtttctgctt ggacgaggtt tagagctgtc agaggaaaag
    12361 acattggtaa ctcatatcaa cgatggtttc gacctacttg gttggaattt tcggaagtac
    12421 aaggggaaat tgattgtaaa accatctaag aattctattc aaactgttat tggtaaattc
    12481 tcagaaacca tcctcaagcg aggaaaagca tgggagcaag aagtcttaat catgaaacta
    12541 aatcaacaga taagaggatg gacaaactac caccaatccg tgtgtgctag tgaagccttc
    12601 tcctatctgg actatcattt atacgaatta ttgtggcgat gggcaaaacg tcgtcatcca
    12661 aagaaaggcc agtggtgggt ttcgaccaag tattggcata gaagaggcaa tcgaagttgg
    12721 gtattcgctt caggcgataa agaactcatt cgagttgacc atactgctat cgtcagacat
    12781 acaaaagtca gagaaaatgc caatccttac ttggatatag actattttgc tcaacgaacc
    12841 tttaatcatg gtatgaaacg gttgacaggt cgttttaaac ttgtttggaa gaaacaagac
    12901 ggacgctgtc atcactgtgg actcccgatg gaacttggag aagatagaga aattttcttt
    12961 aaagttccaa aatcaaaggg aggtgtggaa gaagttgata atatggctta tgtgcatagc
    13021 tactgtcagc gactatttat tgagagccgc tcgaaagagt gatgaaatgc ttgagccgta
    13081 tgaggggaaa ctctcacgta cggttcttag agaggaaggt ggtagtaata ccactaacct
    13141 actcgactac agtattatcg gtcaagcctt tggtggggaa agcattgata ttgcgcctga
    13201 ctctaccact ttcttaaatg ttttagactt atccgatgac aatatggatg aagaccctat
    13261 taaggtcaaa tctgaatttc ttctctcttg gattgggaaa ctcttagacc gaaaaatgga
    13321 tggtcgagaa aagtccctga ttgaccgtgt gacacggtta acctataagc attttgccac
    13381 accatctctc gtagaatggg tctttgttct ctctaaacag cctgaacaag aagccaagga
    13441 cttagccctt gatatggagc tttatgtgga agggtcactc gatattttct cacatcgcac
    13501 caacatcaaa accgatagcc atttcctcat ttacaatgtc aaaaaattag gagatgaatt
    13561 aaagcaaatt gccctcatgg tcatttttga ccagatttgg aatcgtgtgg ttaaaaacca
    13621 aaaacgtggc aagaagacct ggatttactt tgatgaaatg cagcttctgt tgttggataa
    13681 gtacgcttct gatttcttct tcaagctctg gagtcgtgtc cgtaagtatg gcgccatttc
    13741 aacagggatt acccagaacg tggaaacctt acttcttgat gccaacggaa gacgcattat
    13801 cgctaatagc gagttcatga tacttctaaa acaagctaag agtgaccgag aagagttggt
    13861 tcatcttttg ggcttatcta aagaacttga gaaatacttg gtcaatcctg aaaaaggggc
    13921 gggcttaatt aaggccggtt ccaccgttgt tccattcaag cataagattc cacaacacac
    13981 caagctcttt gacatcatga gtacggaccc tgaaaaaatg aggacatgag atgaaagagg
    14041 ataaaaagct agtcaaacag gctaggcaaa actttcgaag taacttaaaa tcagcccgta
    14101 tgcattatcg gaaagaagtt aggaccttaa gacagactgt tcctaaaaaa ggacgatttc
    14161 gaaaacaagc ccaaaattct ctgtttcaag ataagaaaac agagttaaaa gaaaatctac
    14221 tcagtagcca aaaggaagca gaagagaagt tcctaaagga aattacctat gtttctccta
    14281 gactgttgaa ggcaatggaa atcaagaact atcgacttcc tcaagctcaa gagcgtttgc
    14341 ggaccgcaag aaaacatttg tcagaagtga aactaagtga gaagcaaaag gcagttaatc
    14401 ccaagtttac tttccaaaaa gaaaatcctt ccctgaagtc tcgctttcag tttcaccaag
    14461 aaaaatcatt tgatcgactc agtgcagaaa aagacgtatg ttctgccaag cgtgaggtta
    14521 aacaactcaa gaaagtccga aagtctaaga aaaactctac caaagtcaaa gttagattag
    14581 gcttagctgc atctgaatcg cttgacttgg tatcacagga tgatgattta gatggtctaa
    14641 gaaccttaaa ggatactagc ttaaaagcca gacgctatgg caggtttacc tttcaagcag
    14701 gtaaggtggc agtaaaaagt ggacagactg gtgtgcggtt taccaaaaca aaattttctc
    14761 atggaaagga acgattccaa aacttcaaaa agggaaaagg attcacacgc cagaaacctc
    14821 ttaaaccaag aagacgctac caaacctttt taaagcttgc cagaaaacaa agtgtcgcag
    14881 gtttcaaagg aatcgtccaa gccattaagg gaagtatgac tttcttttct gtccttgcgg
    14941 gaaatccttt gacttggatt gtctcaggca ttctcttgat actccttttg atgatgagct
    15001 ttttcatgag tgtttcaggt agtagtgtca ttcaacaaga tgaaatagaa ttgagtaaga
    15061 gttataccca catgacgttg gaagatgcgg agcatacaag aaccaacgaa aagggaatta
    15121 cctactacac caagattgat gagattatgg tttacatgaa tcatcaatac caagactaca
    15181 agcttgacga tttcatggaa acaggcggtg cgacctacaa agaatttctc agtcaagtgt
    15241 ggacggactt aaatggtgga gattctatta aatccatgtc tgacttatat aaagaacctg
    15301 cttacaagct gtctgatgag gaccaggaag agttaaagga gttgacagaa ggaggcaact
    15361 atctagccct tcaagaattg gacaatccct ttcagggaca gactgacgag gatagcttaa
    15421 gcatgaccta ccgatatggt tatgaggtca ttgatgagaa accaacgctt cattaccata
    15481 tcatcttaga agcaaaagaa ggtcaagtca ttgtgtctcc tatggatggc acggtatctc
    15541 atgatggaga gaatgttatt ttgacatctg gtaagggagt gaataagact aaactaacct
    15601 tgtttggcat tcattcaggc cgagtgagtg aaaatcaaca agtcttggca ggagatatta
    15661 ttggtcagac caaagacgga acgggtctaa aagtcaccta tcaaaaggtt gatgatgaca
    15721 cggataagct agtctatgtc aatccagcat tctactttcc aaaagtgatt caggttcaga
    15781 ccaccattct tccaactatc ggtcagtttg gcggcgatga gttcgagaga gccaaggcaa
    15841 tttatgacta tcttaaaagc aaaggtgcga ccaatcaagc taccgcagcc attctaggaa
    15901 attggtcggt agaatcctct attaatccca agcgtgcgga gggcgactat ctatctcccc
    15961 ctattggtgc gacagacggt tcgtgggatg atgagggctg gctttcactc aatggtccaa
    16021 ctatatacaa tggacgttac ccaaatattc tcaaacgtgg tttaggctta ggccaatgga
    16081 cagataccgc ggatgggtca cgcagacata ctttattgtt ggaatatgcc aaaggaaaac
    16141 atcaaaagtg gtatgactta gggttacaac tggatttcat gttgcatggg gatagtcctt
    16201 attacaccaa ctggttaaaa gatttcttca aaaatacagg tagtccagct agtcttgccc
    16261 agctctttct catttactgg gaaggaaata gtggtgataa gctacttgaa cgtcaaacac
    16321 gagccagtga gtggtattac caaattgaaa aaggctttag tcaacctaac ggtgggacag
    16381 cacaaagtga tccaaaagca cttgaagctg tacgaggaga cctttttgaa aactctgttc
    16441 caggaggtgg tgacggtatg gggtatgcct acggccaatg tacttgggga gtcgcagccc
    16501 gtatcaacca actgggtcta aaactcaaag gtaaaaacgg tgagaagatt ccaattatca
    16561 gtaccatggg caatggccaa gattgggtac gaacagccgc aagtctaggt ggagagacag
    16621 ggacaagtcc gcaagcagga gctatccttt catttgcggg aggaggacat ggcacaccag
    16681 cagagtacgg acatgtggct ttcgtcgaaa aagtctaccc agatggctca ttccttatct
    16741 ccgaaaccaa ttacaatggt aatccaaact ataccttccg taaattatct ggagtggata
    16801 gtagtttgag ttttgcttat acgacgaaat aaaaaaagga tatgctaaca aaatgaataa
    16861 atgttagcat atcttttgtg tttttttgtc acgattaatc agaatttata gaaatgagaa
    16921 ctgttatgag acgaatcatc tcatcaagaa catctgcaag tgaaatccct tttgtatagc
    16981 tatatttttt tgaataattt tgccattgtt tattctgaat agggtcagat ttgaacctct
    17041 cgagtagttc aataatcttt acaaaatcga gttctgtttc gcgatatgaa aatgttctct
    17101 gacaggcatt tctcaactga atgaagtcaa tgtcttcttt cttcagtttg gaaagaatat
    17161 aaacatcgta aaaatctttg cttctactgt tcaagaagtt acgtgaatag atggtttgaa
    17221 gtttttcagc tagaattgtt tcaattgtat aagcaatgat tggaaaattg tcttcatcaa
    17281 aaatagcttt atagtcgtat gtaatcggct gaggagttac aacatcacct gtcgcaatat
    17341 ccaaatggat aacttgttta atattctcaa gttggcacga aattgttgct cgatagccac
    17401 catagtcatc actttcttta atagctgtga ttgattgaat cacaaaagat ataccttctt
    17461 cggaatctgc taaaatttcc ttgagttgct gtttaacagt ttcttctgag agtgttattt
    17521 gatggaataa aaagtcaata tcaacagtgc tacgagattc aactccgatg acattcgaaa
    17581 gtaggaatcc tcctttgaag atatagtgat ttgaataaga actttgactt aattttttca
    17641 aaatgacttc taggaagtaa taggtcatga cggaattaaa ggttaaacca gtattctttg
    17701 atattttatg acagagtgct gttaatttag ctttgttcat attagaacct ccagagtttg
    17761 tttaactttt tctaaagtat tcatttttgt cgcatattca tagagttttg ctagattttt
    17821 tttaggatag ttcccataag attgaagtgt cttgacaaag agttcggaat caatcttttc
    17881 tcgatgtatt acaaaatcac aaataatacg ttcaaaatca tataccctta cgttgtttcc
    17941 cataggagta ggtacagtag tcattcccag ctcgctgtat tctttagaga caaagtgaat
    18001 gtttagatta gctggaggag tattaaagcg gtagcctcta ggaactgtca catcaaaata
    18061 ttgtggaatt tcatctgtaa actgttgtag atacagtgcc gaaatataag agaaaatagc
    18121 cttaggaaaa cgatattgaa agaagtagta ttcatcatag tctccgtttt gggttaggaa
    18181 aatacctttt tcaactcgga agataatgcc ttctttctct agtcttgtca gatatattgt
    18241 tggaatacct agtgctttac aatctttgtt tgtgacaatg ccattgttct tttctataaa
    18301 atcgagtaga atctcttttt ttgacatacg gcccccactt gttgctttta cactacaatt
    18361 ttacaatatt tgtggtataa aagcaacatt ttcttttccc tcaatttatt gtgataacaa
    18421 aatcaagcct tcttttttat gatggtattg aacttgggct acgagctgta caaaaaaaga
    18481 gagtttctca tagaacggaa agttcttcgt caaaactcct atttttgtcg tgctcgctaa
    18541 cgccctcgta tctaataaag agtgacagtt tgttgctaca taaaaaagaa aagaaggact
    18601 atttatgacc aaaacatgta atcatcactt tcttgtcaat caagaaaaag gcgagaaaca
    18661 cgtctttcgc aagagtaaaa aatatcgcac tctatgttcc gttgcccttg gaaccatggt
    18721 gacggctgtt gttgcttggg gaggaacggt tgcacatgct gatgaagtta catcaacagt
    18781 tgacaccatc atccaacgaa cggagaatcc ggccacgaat ttaccagaag cacagccaac
    18841 ccctgtttct gaacaaactg aaagtttagc gttaactgga caatctaatg gagcgattgc
    18901 tgtcatcgta ccacatgata cggtaacaca agcagttgaa gaagcaaagg ctgaaggtgt
    18961 ttctacggtt gaagatagtc caatggattt aggaaataca acttctgcgg cagaaaccaa
    19021 ccaacaaatt tcaaaagctg aagcagatgc ccaaaaccaa gttgtggcta tcaatgaagt
    19081 tactgaaacc tacaaagctg acaaagcgac atacgaatcg aatagagccc gcattgaaca
    19141 agaaaataag gagctgtcac aggcctacga aggggtcaac caaactggta aagagacaaa
    19201 tgcttgggtt gatactaaag tcaatgacct aaaaactcgg tatgcagatg ctgatgtgac
    19261 agtaattgaa caagtagttt catcaggaaa tgggacatct gtacttgact atacaaacta
    19321 tggcaaggct gttgaaacca ttcaatcaac taacgaacaa gctgtagcgg attatctaac
    19381 aaagaaaaca aaggcagatg atattgttgc gaaaaatcag gtcattcaaa aagaaaatga
    19441 agctggactt gctaaggcaa aggcagataa tgaagccatt gaaaggcgta atcaggctgg
    19501 tcaagcagct gttgatgctg aaaaccgtgc aggtcaagac gcagtagatc aagctaatca
    19561 ggagaaacaa caattggttt cagatcgtgc agccgagatt gaagctatta caaaacgtaa
    19621 taaagaaaaa gaagccgcag ccagaaaaga gaatgaagcg attgatgcct acaatgccaa
    19681 agaaatggaa cgctatcaac gtgacttggc cgagatttca aaaggtgaag aaggttttat
    19741 ttctgaagcc cttgctcaag ccctcaatct caataacggt gagccacaag cacaacatgg
    19801 agccaatacc cgaaatcctg atcagattat ttcaactggc gatgctttgc tgggtggcta
    19861 ctcaagaatt ttggattcaa caggattctt tgtctatgat agcttcaaaa caggtgagac
    19921 ccttagtttt aactatcaaa atcttcaaca tgcacgattt gatgggaaaa agattagtcg
    19981 agtgacttac gatattacca accttgtatc accagctgga accgatgccg tgaaattggt
    20041 tgtgccaaat gatcctaccg aaggcttcat tgcctatcga aatgacggaa atggtgactg
    20101 gcgaacagac aagatggagt ttcgtgtagt tgctaagtat ttcttggaag acggttcaca
    20161 agtcaccttc tccaaagaaa aaccaggagt cttcacgcat tcttccctca atcataatga
    20221 cattggttta gaatatgtta aagattcatc tgggaaattt gtgccgatta atggttctac
    20281 cgttcaagtg actaatgaag gtctagcacg ttctttgggt tccaaccgtg caagtgattt
    20341 gaatttacct gaggaatggg ataccacatc aagtcgttat gcttataaag gagcaattgt
    20401 ctcaacagtt acatcaggaa atacctacac agtaaccttt ggccaaggcg atatgccaca
    20461 gaatgttgga ttgtcttact ggtttgcctt aaatacccta ccagtggcac gtactgtaac
    20521 accatatagt cccaaacctc atgtaacggt ggaacttgaa cccattccag aacctattac
    20581 ggtaacacca gatgtcttta cgcctaaaac atttacacca gaaaagcctg tgaccttcac
    20641 gccaaaacct ttggaagagg tggtgcagcc tagtctgacc ttgaccaaag taaccttacc
    20701 tgttaatcct actccaaaag aacttccaac gccaccacaa gtaccaactg tccattatca
    20761 tgcgtaccgt ttgacaacaa ctccagagat tatgaaagaa gtggtcaata gtgaccaagc
    20821 taatcttcat gagaaaactg tcgcaaaaga ttcaacggtg atttatccct taacagttga
    20881 tgccttatcg cccaatcgtg ctcaaacgac taatctcatt tttgaagact atttgcctgc
    20941 aggttatttg tttgataagg aaacaacaca aaaagagaat ggaaactatg tccttagctt
    21001 tgatgagact aagaattttg tgaccttgac cgcaaaggaa aacttgttgc aggaggtaaa
    21061 taaagattta accaaggttt atcaactgac cgctcctaaa ctctatggtt ctgttcaaaa
    21121 tgatggggca acttattcca atagttacaa actccttttg aacaagggca caaccaatgc
    21181 ttacacagtc acttcaaatg ttgtaacggt tcgtacacca ggtgatgggg agacaaccac
    21241 gctcattaca ccagataaaa acaatgaaaa tgcggatggt gtcctcatta atgacacggt
    21301 cgtagccctt ggcacaacca accactatcg tttgacttgg gatttggacc agtataaggg
    21361 agatcgttct gctaaagaga caattgcacg aggcttcttc tttgtggacg attacccaga
    21421 ggaagtgctt gatgtggtgg aaaatgggac ggctgttaca acccttgacg gtcagaaggt
    21481 atcaggaatt acggttaaaa actatgcttc cctaaatgaa gcccctaaag accttcaaga
    21541 taaattggct cgtgctaaga ttacaccaac aggtgccttt caagtctttt tgccggatga
    21601 caaccaagcc ttttatgacc agtatgttca aacaggaact tctttagctc ttttgaccaa
    21661 aatgacgttg aaagatagtc tctacggtca gacaaagacc tattcaaaca aggcttacca
    21721 agttgatttt ggaaatggct atgaaaccaa ggaagtgacc aacacccttg tttctccaga
    21781 acccaagaaa caaaacctaa acaaggataa agtggatatc aacgggaagc ccatgctagt
    21841 gggaactcaa aatcactata cactctcatg ggacttggac caataccgag ggattaaagc
    21901 agacaactct cagattgcac aaggttttta ctttgtggat gattatccag aagaagcttt
    21961 attgcccgat gaagcagcta ttcagtttgt cacatctgat ggcaaaacag tttcaggaat
    22021 cacagtgaag tcttattctc aattatcaga agctccgaaa acactacaag cagccctttc
    22081 gaaacaaaaa attcagccta aaggagcttt tcaagttttc atgcctgagg acccacaatt
    22141 cttttttgaa tcttatgtga ccaaggggga gaatattacc attgtcactc cgatgacggt
    22201 tttggaaacc atgcttaatt cagggaagtc ttatgaaaac gtggcttatc aggtggactt
    22261 tgggcaagcc tatgaaacca acacggtgac caattttgtc cctaaagtaa ctccacataa
    22321 gtctaatacc aatcaagaag gtatttcaat tgatggaaag actgttcttc cgaatacggt
    22381 caattattac aaaattgtct tggattacag tcaatacaag gacatggtcg tgacggatga
    22441 tgttcttgcc aagggatttt acatggtaga cgattaccca gaagaagccc ttaccctaaa
    22501 tcctgatggc attcaagttt tggataagga tggcaatcgt gtatctggta tctctgtcag
    22561 cacctacgct agtttgtcag aagctccgaa agttgttcaa gatgccatgg ctaaacgtca
    22621 gtttacacct aaaggagcca ttcaagttct tagtagcgat gaacccaaaa ccttttatga
    22681 gacctatgtg aagactggtc aaaccttagt tgtcacgctt ccgatgacgg taaaaaatga
    22741 gttgaccaaa acaggtggtc agtatgaaaa tacagcctat cagattgatt ttggcttggc
    22801 ctatgtcacg gaaacagtgg tcaataatgt tcccaaacta gacccacaaa aagatgtggt
    22861 gattgacttg tctcataaag atgagagcct tgacgggaaa gaagtggcct tgtatcaaac
    22921 ctttaactat cgcttggttg gagcattgat tccaagcaat cgtgcgactg atttatttga
    22981 atatggtttt gaagataact atgatgaaaa gcatgatgag tataatggtg tttatcgcag
    23041 ctatctgatg acggatgtca tcctcaaaga tggttctgtc ttaaaagagg ggacagaagt
    23101 cacgaaatat accttgcaac aggtggatac agaaaatggc ctcgtgtcaa tttcatttga
    23161 taaatccttc ttagagacta tctctgatga ttcagccttt caggcagatg tttacctgca
    23221 gatgaaacgg attgcgactg gtcaggtgga gaatacctac ctttatacag tgaatggcta
    23281 tgtcatcagc tcaaatacag ttgtaacaca tacacctcaa cctgaagaac caagtccaaa
    23341 tcaacccaca ccacctcaac caccaattga gactattgaa ccgcctgttc cagcaaatat
    23401 tttgccaaat acaggggaac aggaatccct tttgggcttg attggagctg gtattctact
    23461 tggtacggct tatggactga agaaaaagga ggagaagtag atgaatccaa aaactattta
    23521 tgaaaaggat tcagaccaag atggtttgac agatgctcag gaactagctt tgggaaccaa
    23581 tccgcagtct gttgacacag atggtgatgg tcaagctgat ttagaagagc tacaatctgg
    23641 acattcacca ctagtcccac aaaaggagtt gtgtgatggc ttggaacttt gacaccatga
    23701 aagaggcttt gtctgaaatg gagaaggtcg attaccaaga gtttatcaag gcctttctct
    23761 ctttggaatt aagtatttct gatagaacaa tcctcaatca ggtttatcaa gattatatgg
    23821 atgaggatga cctatccttg attagtgatg agctacgagt taaagttgat agttatcagg
    23881 atgaagtaca ggcagatatg actgacattc tggaaaagtt gtaccgaaca ggtgaaggct
    23941 ctaattttat tatggattta atgtcctcaa atagtctttc agacaccttg gaacagtatg
    24001 aggttttgga tagtgacgat tattcactac ttagccttga aaccttacag gccatgattc
    24061 aacaggactt ggctatttct agtcaggatt attttggaga tttggttcac cttgccttgc
    24121 aaaaagattt actagaccag aaaagtcatt tcttacaaca ctatgtggca actgtaatgg
    24181 atggtattcc acaagaaaga gaccaacgag ccttggtcct agattaacac aaagggctga
    24241 gaaacactct cagccttttt aaaatgggag ggaataatga atcaagaagt cttactacaa
    24301 atgatgagag caaccattcc tcgtgataga gccttgcttg aagcgttttt atattaccaa
    24361 gcagagcatt ttgatgagga gtgggatagt ctcgtttatc agtttatgac caataggcag
    24421 gaattcaaaa gacctgttca ggtacttcac tttgagacag atgtttcagc ttttgttcag
    24481 gctagtcctt atgatactgc tcatgatcta ttgacctata cacaagtatt cggccaaact
    24541 ggtctccaaa aacttgacaa actatcgacg tctgaaaaag acttggtgat tgaagtggcc
    24601 ttgttcaatc tggccactcg ttttcaacta ttagactcaa atggacacta ccaaactatt
    24661 tcaccagatt ctctattaca aaagagtagg ggagctaatt tggtcaatgt ttatcgtgtg
    24721 gctaataatt tagcggaacg cattagccga gatattgaac agtttctctt gacttacgag
    24781 cctgagcttg aaacgagagt tgaggaaaca gttcaagaaa aagaagaaac tgttgatgag
    24841 cacaaaacaa gtgttcatca agcaatatct tttcgagaag agggctccct ggttattgct
    24901 agtttggatg tagatttgtc tcaactggat atccgaactg gaaaaaccag tcatctacca
    24961 gcttatgaag agttatcttt acgacgtaaa tttgagattc taacctattt tgaccagatt
    25021 cgaaatgaac gttcaaaact tccgaatctt agacgaggtg attttgatac tgagatggaa
    25081 aagacaccaa tctttgatgg cgaggagtta cttacctatc tagaggctga tggcagcctc
    25141 tatgagctga aacggacact gactacagtc gaagaaaagg aattagaaaa aattggacaa
    25201 gccattagga cagaaaatca agaaaaattg actcaggtag ggattgattt atctcagttt
    25261 gactctgacc aaatcggtat tttattggat gccgcaggtc gttttcatct gaaaaatgcg
    25321 gatcttgcat tattaggtgg ctatccaaat gcctctgtaa ctcaactagc ccttgcgaca
    25381 gaactactcc aaatgggatt gagtcatgaa aaaattgaat ttttctttgg tagtcagctt
    25441 tccattgaag agctgcgaca agttgcctac gcctttttac accaagaact tagcatagaa
    25501 gacgcggagc aatttgaaaa agataaaggc aatcagccag atttaaccct cagagattgg
    25561 aagaacaagc tagagaaagc tgagggaaaa gaagtagttg atgaagcgtt tgaggtaaat
    25621 ccacttgttc agatggtttt ggacactttt cctcttgggt cattagtttc ctacaaggga
    25681 caggactttg aggtcgtttc ggtcagcgat gctcgattga acggtttgat tcggattgag
    25741 ttagtcaatg acttttcgga tatcattgaa caaaatccag ttctttattt gaggacctgg
    25801 gaagaagtta gtcaggcact tcatcagcca aaggcagaac cacaaacaga gttagacgat
    25861 gaagaccaag aattaaacct tttttcattt ctggaagagg aaacaagtca atctgttaat
    25921 gaagctgttc agaacattgg agttttggat ccagaacaat cgggagaagc tagtcatgac
    25981 agtgaaaagc caaccattta tgtacctgaa gaagtgcttg tagaatcgat tccagatatt
    26041 ccagcaacgg ctttctactt tccagaagat atgacggact tttatcctaa gactgctaga
    26101 gataaggttg agacaaacat tgcggctatt cggttggtta aaacacttga aacggaacgc
    26161 cgtcaagcaa gtacaagtga acaagaactc cttgccaagt atgtgggctg gggtggactt
    26221 gccaatgatt tctttgatga ctatagtcca aaattttcta aggaacggga agaactgaaa
    26281 agcctagtca cagataaaga gtattcggat atgaaacagt cctctctgac agcctattat
    26341 acagaccctg cccttatccg tcagatgtgg gataagttgg aaagagatgg ctttacaggt
    26401 ggcaaaatcc tagatccttc catgggaaca gggaattttt ttgcggctat gccaaaacac
    26461 ttaagagaaa agagtgagct atatggcgta gagttagata ctattacagg agctattgcc
    26521 aaacaccttc atcccaatag tcacattgaa attaagggct ttgagacggt ggcttttaac
    26581 gacaatagtt ttgatttggt gatttctaat gtgccctttg ccaatatacg aattgcggat
    26641 aataggtatg ataagccgta tatgattcat gactactttg tcaaaaaatc tcttgattta
    26701 gtccatgatg gtgggcaagt agcgattatc tcttccacag gaaccatgga taagcgaaca
    26761 gaaaatattt tacaagatat tcgtgagaca actgaatttc ttggtggggt tcgactgcct
    26821 gattctgcct ttaaggccat tgcaggaacg agtgtcacaa cggatatgtt attcttccag
    26881 aaaaacttag acaagggata tgtggcagac gacttagcct tttcaggttc cattcgttat
    26941 gaaaaggata gtcgtatttg gctcaatcct tactttgatg gagaatacaa taaccaagtg
    27001 ctaggaacct acgaggtcag aaattttaat ggcggaacac tttctgttaa ggggactagt
    27061 gatgacttga ttgcaagtgt tgaaacagct ctacatcaag taaaagcccc aagaaagatt
    27121 gatagaaatg aggtcatcat taacccagat gtgttgacca aacaagtcat tgatacctcc
    27181 attccagctg aaatgaggga gaatctaggt cagtacagtt ttggttatca ggattctacg
    27241 gtctactatc gagataataa aggcattcga gtcggaacca agacggaaga aatcagttac
    27301 tatgtcgatg aagagggcaa cttcaaagca tgggacacca agcattctca aaagcagatt
    27361 gatcgcttta atgccttaga agtgactgat aacactgctc tggatgtcta tgtgaccgat
    27421 gatgcagcaa aacgtggtca gtttaaggga tattataaaa agacagtttt ctatgaagct
    27481 ccattgtctg ataaagaagt ggcacgaatc aaaggaatgg tcaatattcg caatgcctac
    27541 caagaagtta ttgccattca acgctattat gactacgata aggagacctt taaccacttg
    27601 ttaggcaaac tcaatcgtac ctatgatagc tttgtcaaac actatgggta tttgaacagt
    27661 gcagtgaacc gcaatctttt tgatagtgat gataagtatt cgcttcttgc tagtttggaa
    27721 gatgaacgtc tggatccaag tggaaagtct gttatctata ctaaatccct tgcttttgag
    27781 aaggctttag tgcgtcctga aaaagaggtt aaaaaggtac atactgccct tgatgcctta
    27841 aattccagct tggctgacgg acgaggtgtt gatttcgctt atatgatgtc tatctatcag
    27901 gttgaatcgc agatgacctt gattgaggag ttaggtgacc tcattatgcc tgatcctgag
    27961 aagtatttga atggagaatt gacttatgtt tctcgccaag actttctgtc cggtgatgtc
    28021 gttagcaagt tagaagtggt ggacctactc gtcaaacaag acaatcgtga ctttaactgg
    28081 acgcattatg caggacttct agaagcggtt aaaccagcac gtattacctt ggcagacata
    28141 gattatcgga ttggttcacg ctggattccc ttgtctgttt acggaaaatt tgcccaagaa
    28201 acctttatgg ggaaagccta tgaactgtca gaccaagaag tagcaacagt ccttgaagtc
    28261 agtcccattg acggggttat cacttaccaa tctaagtttg cctacaccta ttccaacgca
    28321 acggatagga gtttaggtgt ccctgcttca cgctatgata gtggtcgaaa aatctttgaa
    28381 aacctcctga attccaatca accaacgatc acaaaacaag ttgtcgaagg ggataagaaa
    28441 aagaatgtga cggatgtaga gaaaacaaca gtcctgcgtg ccaaggaaac gcacctacaa
    28501 gaactctttc aagattttgt agcaaggtat ccagaagttc aacagataat tgaagacacc
    28561 tataacagtc tctataatcg tacagtatca aagacctatg atggtagcca tttaaccatt
    28621 gatggacttg cccagaatat atccttacgt cctcaccaaa agaatgccat tcaacgaatt
    28681 gtcgaggaaa aacgtgccct actagctcat gaagttggtt caggtaaaac acttaccatg
    28741 cttggggcag gattcaaact gaaagaactc ggaatggtaa ataaaccact ttatgtggtg
    28801 ccgtctagtc tgactgctca gtttggtcaa gaaatcatga aattcttccc aatcaagaaa
    28861 gtctatgtga ccaccaagaa agattttgcc aaagccaaac gtaagcagtt tgtgtcccgt
    28921 attattacag gggactatga tgccattgtc attggggatt cacaatttga gaagataccg
    28981 atgagtcgtg aaaaacaggt cacctatatc aatgacaaaa ttgagcaact cagagaaatc
    29041 aagctaggaa gtgatagtga ttatacagtg aaagaagcag agcgttcgat taagggacta
    29101 gaacaccagt tgaaagaact ccaaaaactg gagcgagata cctttattga atttgaaaac
    29161 cttggcattg attttctctt tgtggatgag gctcatcact tcaagaatat ccgaccaatc
    29221 actggacttg ggaatgtcgc gggtatcacc aataccactt caaaaaagaa cgtagacatg
    29281 gaaatgaagg tgagacaggt tcaggcagag catggcgata gaaatgttgt ttttgcgaca
    29341 ggaacaccag tctcaaactc cattagtgaa cttttcacta tgatgaatta cattcaaccc
    29401 gatgtcttgg aacgatacca ggtatccaat tttgactcct gggttggggc ttttgggaat
    29461 atcgaaaact ctatggaact agccccgaca ggagataaat accaacctaa gaaacggttc
    29521 aagaaatttg tcaaccttcc tgaactcatg cgaatttaca aggaaacagc tgatattcag
    29581 acttcagata tgcttgattt acctgtacct gaagctaaga ttattgcggt ggaaagcgag
    29641 ttaacgcaag ctcagaaata ctatttagaa gaactggtag agcgttcaga cgctatcaag
    29701 tcaggtagtg ttgatccaag tagagataac atgcttaaaa tcgtgcgctg ttaagcgtaa
    29761 aaatgtatct ccctcgcaga gggatattat tgaaagtaaa taataggaac aactaactaa
    29821 cctagcgggg aaacccaaag gggacaatag catgttagta aagcggataa ggagtgagtt
    29881 acaacgcttt gatgtgccgc aagttccgta acctatggtt aaggctaaac tgcttgaaca
    29941 tcaattctga ctaggtgcaa agcatcgccc atcggaaagt aactgagacc gatgttactg
    30001 tatattcgtt gttgtgattt tggacgaata actttctaca gtaaaagagc atacgataag
    30061 tatgaataaa ggaatgagtg aggaacctaa gggttactag aacgtacatt tttaacgaat
    30121 agcaggattg cctaagaggg gagaccctta tggtaacgga gtcaccgtag tagtttgagc
    30181 aagggaaaac cttgtacatg gcgaagggtg acaggtaatt tcgattagtt agaaaggatt
    30241 aggtgcgtga gatgcgtaca gccaaaacta ttttaacagt cattcatgaa cgtggaaaac
    30301 aagataaacc acttgaaagg gtttataaat tactatttaa tcgtgaattg tatctaatag
    30361 cctatgcaaa gttatacccg aataacggag caatgacaaa gggtgttaca gaggaaacga
    30421 ttgatggtat gtctattcaa aaaatagata ggattattga acaattaaga cgagaaacct
    30481 attactggag accagctagg agagagtaca ttcctaaaaa gaatggaaaa caccgtcctt
    30541 tgggaatacc agtatggagt gataaacttc ttcaggaagt gattcgcatg atattagaag
    30601 cctattatga gccacaattt agtgaacatt ctcatggttt tagaccaaaa agagggtgtc
    30661 atacagcttt acaagaaatt cagacttgga aagggacacg ttggttcata gaaggagata
    30721 tctctagtta ttttgacacg attgaccacg atgtattaat cactatgttg tctagacaaa
    30781 ttcaggatgg tcggtttatt aggcttatca aaaatatgct tgaggcagga tatcttgatg
    30841 attggaagtt tcacaagact attagtggaa caccgcaagg tggagttatt agtcctttat
    30901 tagctaatat ctatttacat caatttgata agtgggtcgg tgaagaactg atacctcaat
    30961 atacaagagg taaaaagcag aaagcaaact cagcctataa tcgtttgagt agaagaatta
    31021 aatgctatca ggataaagga gattataaaa aagctcatca gttaattgtt gagagaagaa
    31081 atctcccttc agttgatact tatgatacca gctatcggag attaagatat gttcggtatg
    31141 cggatgactt tattctaggc tttacaggtt caaaagctga ggcaaaggct ataaagaagc
    31201 aaattggaga ctttttaaat actaagttat ctttggaact ttctcaagaa aagactttga
    31261 ttacccatgc gactggagaa tcagctaaat ttctgggata tgagataaaa gcacaacgtg
    31321 tcaatgatta tattgataac aaagggagac ggagtgccaa tggtgttatc gcattatttg
    31381 tacctgcatc agttattgaa agcaaatgcc gccaatacat gaaaaatggt aaagctattc
    31441 atcgtaataa cttattgcag gatgatgact ttagtatcgt tcaaacttac caacaagaat
    31501 atagagggct ggttcaatat tatatattgg cacaaaattt gtcatggttc tcaaaagtct
    31561 attggtatat ggaaacatca ctccttaaaa cattagcatt taaacataag tcatccatta
    31621 ataaaatgtt agctaaatat aagactacca caactagcac gaatggccga actgtgccgt
    31681 gtttacaggt agttgtgcct cgagaagata aacctcctct agttgcaacg tggggtggca
    31741 tttcactttc ttataaaaag aaaactgtaa tagaagatgc tccgtatcaa gtttatggtg
    31801 gtcgaacaga gcttatcaag cgattactcg caaataagtg tgagctatgt ggaagtgagg
    31861 agaacataga ggtacatcat atcagaaaat tagcagactt gaacaaacac aatgggaaat
    31921 tagttccaaa gtggaaagaa gtcatgtcag caagacgtcg aaaaacgcta gtgacctgtc
    31981 gggattgtca ccatgcgata cataatggtt caataaatac acgtttatga aatgaaatta
    32041 ctggagagcc ggatgatgcg aaagtatcat gtccggttcg gtggggggat aatggaaaag
    32101 gggtcgcaat gactacctcg ctagtatcct accctacaca ggtgaagcca gaaaactagc
    32161 cattgatatg cggttgattg accgtgctta ctccttatcg gataatcaga aaatccttca
    32221 agtcgttgat aatgtcgagc ggatttaccg tgaaggagct gaagacaaag ccactcagat
    32281 gattttctct gatattggaa cgcctaaaag taaggaagaa ggatttgatg tttacaatga
    32341 acttaaggac ttgcttgtcg atcgagggat accaaaagaa gaaattgcct ttgtgcatga
    32401 tgccaatact gatgaaaaga aaaacttact gtctagaaag gtcaatagcg gagaagtacg
    32461 gattctcatg gcttctacgg aaaaaggtgg aactggtcta aacgtgcaat cacgtatgaa
    32521 agctgtccac cacttagatg ttccatggcg tccttctgat gtaggacgga ttttgcggac
    32581 attcaaaata aaaaagaatg tggaggtaac agacaatggc aaaatcatta tttgaggaaa
    32641 tgggcggcaa atacgaaagg caaggcgatt atttaatacc gtgcttaact gtacccgccg
    32701 aagaagaaca gccgataggc atctggggac agcggcattt ggattatctg aagcatcact
    32761 gcaaagttac atacaccaat cttcttacaa gcggcagact taacgcttac cttgccgaca
    32821 ttgacagaca ggcacaggaa cgctttgaaa ggctcataga gggtatgaaa caggcacagg
    32881 gcataacgga acagctaaag gcagaaaacg ccttagaatg gacaggatgc ctcaataaca
    32941 taagggcttg tgcgagggag attgtggaaa aggaaattat ttttgcataa acagatgatt
    33001 agtggcaggg ggaaatcctg ccgctttttc tgctttagtt tgtcagcttg acaaataaag
    33061 ggttaaggaa tataattaga ttcagtatta tacaaggagt taataaatat gcggcaaggt
    33121 attcttaaat aaactgtcaa tttgatagtg ggaacaaaaa gtagcagtcc cgtttcactt
    33181 ttaatatggg gcttagtttt ttgtacccag tttaataata cttttatcat gtaattttat
    33241 atgcccgaaa acatataagt gttttggggc tattggagtt atttacccag tgataggagt
    33301 atttatcact gggtattttt atgccctttt ttgggtgttg ataggaggaa aatcacatga
    33361 aaataattaa cttaggcatt ctggctcacg ttgacgcagg aaagacaaca ttaacggaaa
    33421 gtttattgta taccagtggt gcaattgcag aactagggag cgtagatgaa ggcacaacaa
    33481 ggacagatac aatgaatttg gagcgtcaaa ggggaatcac tatccagaca gcagtgacat
    33541 cttttcagtg ggaggatgta aaagtcaaca ttatagatac gccaggccat atggattttt
    33601 tggcggaagt atatcgttca ttatcagttt tagatggggc aattctactg atttctgcaa
    33661 aagatggcgt acaagcacaa actcgtatat tatttcatgc acttaggaaa atggggattc
    33721 ccacaatctt ttttatcaat aagattgacc aaaatgggat tgatttgcca atggtatatc
    33781 gggaaatgaa agcaaagctt tcttcggaaa ttatagtgaa gcaaaaggtt gggcagcatc
    33841 cccatataaa tgtaacggac aatgacgata tggaacagtg ggatgcggta attatgggaa
    33901 acgatgaact attagagaaa tatatgtcag ggaaaccgtt taaaatgtca gaactggaac
    33961 aggaagaaaa caggagattc caaaacggaa cgttatttcc cgtttatcac ggaagcgcta
    34021 aaaacaatct ggggattcgg cagcttatag aagtaattgc cagtaaattt tattcatcaa
    34081 cgcctgaagg tcaatctgaa ctatgcgggc aggtttttaa gattgaatat tcggaagaaa
    34141 gacaacgtct tgcatatgta cgcctttatg gcggaatcct gcatttgcgg gattcggtta
    34201 gaatatcgga aaaggaaaaa ataaaaatta cagaaatgta tacttcaata aatggtgaat
    34261 tatgtaaaat tgataaggct tattccgggg aaattgttat tttgcaaaat gagtttttga
    34321 agctaaatag tgttcttgga gatacaaagc tattgccaca gagagagaga attgaaaatc
    34381 cgctccctct gctgcaaaca actgttgaac cgagcaaacc tcaacaaagg gaaatgttac
    34441 ttgatgcact tttagaaatc tccgacagtg acccgcttct acaatattat gtggatacta
    34501 caacgcatga gattatactt tcttttttgg ggaatgtgca gatggaagtc atttgtgcca
    34561 tccttgagga aaaatatcat gtggaggtag aaataaaaga gtctactgtt atatatatgg
    34621 aaagaccgct tagaaaagca gaatatacca tccacataga agtcccgcca aatcctttct
    34681 gggcttctgt cgggttgtcc atagagccgc tccctattgg aagcggagtg cagtatgaaa
    34741 gcagagtttc acttggatat ttaaatcaat cgttccaaaa tgcggttatg gagggggttc
    34801 tttatggctg cgagcagggg ctgtatggat ggaaagtgac agactgtaaa atctgttttg
    34861 aatatggatt gtattatagt cctgtaagta cccccgcaga ctttcggctg ctttccccta
    34921 tcgtattgga gcaggcttta aaaaaagcag ggacagaact attagagcca tatctccact
    34981 ttgaaattta tgcaccgcag gaatatctct cacgggcgta tcatgatgcc ccaaggtatt
    35041 gtgcagatat tgtaagtact cagataaaga atgacgaggt cattctgaaa ggagaaatcc
    35101 ctgctagatg tattcaagaa tacaggaacg atttaactta tttcacaaat gggcagggag
    35161 tctgcttgac agagttaaaa ggataccagc cagctattgg taaatttatt tgccaacccc
    35221 gccgcccgaa tagccgtata gataaggttc ggcatatgtt ccacaagtta gcttaacagc
    35281 ttgcaaaagt catataaaat gagatttgaa aggattagag actaattatg atgaaatgcg
    35341 aatggatatt gtgtcctgtt tgtgggagca aaacccgtaa taaaattagg aaggacactg
    35401 ttttggagaa ttatcccctt tattgtccaa aatgcagaca agaaagattg attaaagttg
    35461 acaacttgaa gataactgtc atcaaagagc cagacgctta agacgcagag ccgatgaaat
    35521 tgtggaacaa ttcacgaatc atcggctctt tttgtttcgt atttgaaaga acaaactcac
    35581 caaataaaaa aaacgatatt cgggtgggtt attttgttat accctaaatt accctctgaa
    35641 tttgttttta aatttggagg gatttttttt atgtcctttt ttcgggcagt tatctatctg
    35701 ctcatacgaa gcaaaattta tcaatacata gcatatcaga gaacggcagg aaaccagtta
    35761 aaaaaatttc tgccagtgca acggtacttc tcaccttgaa agtagaagta caatctccat
    35821 acaatagaat tactatttcc tataaccgta aaggtcacag agcctttgcg gtttttcttt
    35881 tgtcgatttt tgttggaaag tgccgtaggg ctgtttctga tatgcggtgt cgttctccgc
    35941 ctctccatct ggatttttta catttcaaaa attcagatgg gaggtattta tggtgaaata
    36001 tgcaccaaga aaggtatata tcagagaaag tggcggctat gtggaattat cctacacgga
    36061 gttctgccgt tgcagggaat ccgaccagac ctatatggac aagctgttta tccccattca
    36121 aggctgtctg cttgaagtcg tgagggagca atacacagac ttctaccgtg acaaggaacg
    36181 gtggcgttat ctgcaaaaat tagatacaaa gaatagactg ctatctctcg acggatttac
    36241 ggacagcgag gggaatcctc tggactttat cactgatgaa gcggtggaca ttgcagaaac
    36301 cgttgtcaat gcggtcatgg tggacaggct gaaagccgcc ctgcctttgc tgtcggatag
    36361 tgaacaggag ctgatacagg caatcttttt tgacggactt tccgagcgtg aagtcggggc
    36421 gaggttgggc ataacccaga gcgttgtaaa caaacgcaaa gccagaatcc taataaaact
    36481 aagaaagata atagaaaatt aaaatttaag gcgttcagcc cccttgtttt ttcctttggg
    36541 aagatgaggg ggcttttctc tgccctctca atcaattctg attggaggaa gtaagaatgg
    36601 catacaacca cggacgggag gacaggaaat ggcgtatctg gaaagaagcg gaggaaaagc
    36661 tgctgcgtga gtgcggcgtt gatgaagcga ccattgagca gatacgcatg gcggacaggg
    36721 cagacttcaa ttccaacagg cggttttacc gatggacgaa tgacgttgcg gaatatcttg
    36781 aggacatggc aggcagggag cggcaggcgg aagtgggtac ggttgcggag ttactggaag
    36841 agattgagag cgaaaatctc tatcaagtat tagtcacggt ggacgggcgt accttgaaaa
    36901 tcgtcctgct gaaaatgcag gggtattcca caaaggagat tgccccgctt gtgcatttga
    36961 cgactggtgc catctatgcg aggttagacc atctgcggaa gaagctgcgg aaaattttat
    37021 agcttctaaa acagcctgcc atcctgcggg ctactgggtg agggatggaa atcccctcac
    37081 tcattttttg caggaggaca acaggatggc atacagggtt aaggcataca cgcttcggga
    37141 ggaatccacg gaaagcggca caaggtattt tatcagcttt aaggacgggc agggcaaatc
    37201 ccacgagttg gaagtgtcgg aacagttctt tatggagttt cggcagatgg agcgcaggaa
    37261 caggaatctt ttctaatggg acgagcggca cagggagttt aacgaggtat gggacgaaac
    37321 cctttacaga cgggcgttgc gtgtgcctaa gagccttgat gaacgcatgg ttgaggaaga
    37381 acggaatgaa acgctctata aggcggttgg gagccttcca gagatacaaa ggcggcgttt
    37441 cctgctctac tacgagtatg agttcaattt ttaccaaatc gccgctatgg agcattgcac
    37501 cgcttcggca atacagaaat ctgttgcgat tgcaaaggag aaagtaaagg cggaaattga
    37561 agaaatatct ccaaccgtga ccgacaccgc ccgaaaaaga aatctgtttt ttatttgtgt
    37621 gggattggcg gcattccata ctctcacttt tttccgtggg agtaaatcta tttttaagga
    37681 ggtcaacgcc tatgtgcaac gaaaacaaag acaccgcccg aggaggaaag ccatgcagaa
    37741 gttacagaca gtcaacgccg aaacgctcct ttatgaaccg cttgagaaac catcctttgt
    37801 ggtggacagc cttatcccga caggcttatc gctgttctgc ggctcacaga agataggcaa
    37861 aagctggctc atgctgaagc tatgcttatg cgtgtcgcag ggaatccctt tatgggatat
    37921 gccgacaatg gagggcgatg tgctttacct ctgccttgag gacacgttct gccgcataca
    37981 ggacaggtta tttcgtttga cggacgaagc aagcgggcgg ctccactttg ccgtggcaag
    38041 ctgcaagctg tcagacggtc ttatcgtgca gcttgaagat tatctgaaag attacccaga
    38101 cagcaggctc attgtcattg ataccttgca gaaagtccgt acagcttcaa aagacaatgc
    38161 ctatgcaagc gactatgggg acatctccct catcaaagac tttgccgaca ggcactctct
    38221 ggcggtcatt gtcgtacacc acatccgaaa gcagaatgac agcgacgtgt tcaacaaggt
    38281 gtctgggacg acaggattaa cggggagtgc ggacgctacc tttgttctgg aaaaggagaa
    38341 acgtgcgtct gacaccgcca agctgtatgt gacgggcagg gacacgcctt atcaggaata
    38401 cacgctgcgt ttccgtgatt gccgttggga gcttgtggag cggaaaacgc aggagcagct
    38461 tgcgaaagaa acgataccag atgtcctttt tcggttggtg gattttatga gggataagga
    38521 agaatggata ggcacggcaa cggaactgtt agccgctatg ggggaaacgg aaaccatacc
    38581 cacggtgatt acgaaatggc tgaatgaata ccgcaccaca tttttaagcg agaaccgtat
    38641 ctgctaccag tacagccgca ggaaagacgg caggcggatt gcccttgcaa ggagggcggg
    38701 tgacagcggt gatggtggtg acagcgatat taggataccc ccctgttact gtcattgacg
    38761 cttaaagcca tgtaaagctg gcggctctgc cctgcgggtg acagcagtga cggtggtgac
    38821 agtgatttta ggataccctg ccgctgtcat ccctacggga gaacaccccg taaacgcaaa
    38881 atgcaggcgt gagatttact cgcccttttc ggtcgtgtaa aaccacccct gcggtcagaa
    38941 aaatcattcc gatttttccg actgcgttta cagggtgtaa cacactacac tttgccctgc
    39001 aaagtcgtgt gccagacgtt ccctctggac tcccttaagg cagggctgtg ccctgctatc
    39061 ctacgcctta cggcttcgga taaaagaatg gcggcatgac ggtgacggct cttgcgaggg
    39121 gggtatccca aaaacaccgt catcatcgac atgaccgtca tgcagggggt gagggtgaca
    39181 gttgcggcag tcggcagggg gtatcccaaa actgctgtca ccaccgtcac cgctgtcacc
    39241 ccaaaggacg gtcacccgcc gaaagaaagg aggaatccgc ctatgcctta tgcaatcctg
    39301 cgtttccaga aacgaaaagc gggcggcgtt gcggcttgtg aacgccacaa cgagcggaag
    39361 aaagaagcct acaaaagcaa cccagatata gatatggaac gctctaaaaa caattaccat
    39421 ctcatagcac caccaaagta cacctacaag aaagagatta accgcatggt agccgaagcg
    39481 gggtgcagga caaggaaaga cagcgtgatg atggtggaaa cgctcatcac agcttcacca
    39541 gaatttatga accagttacc gcccgaagaa caaaaagcgt atttccagac ggctcttgac
    39601 ttcatttcgg agcgtgttgg aaagcagaat atcctctccg ctgtcgtcca tatggacgag
    39661 agaacgcccc atatgcacct ctgctttgtg ccgattacgc cagacaataa gctgtcagcg
    39721 aaagctatct taggcaacca gaaatcatta tccgagtggc agaccgccta ccatgagcgg
    39781 atgtcctcac ggtggaatca gcttgaacgg gggcagtcct caatggaaac caagcggaaa
    39841 cacgtcccca catggctcta taaattaggc ggcaggcttg ataaacagta tgaagaaatc
    39901 gtgtctgccc tatccgacat caacgccttt aacgcaggga agaaaaggga taaagcgtta
    39961 gatttactct ctgcatggct gccagacgtg gagaaattct ctaaggaaat cgggaaacag
    40021 caggcgtata tcgacagttt gaaagagaga attgggcagg aatcagacta tgcggggcgt
    40081 atgcgtgatg aaaagtacga gcaggaacta aaggtgcaga aagcgaatca gaagatattt
    40141 gaattgcaga gaaccaacga gcagatgggg cggctgctgt caaaaatacc gcccgaagtg
    40201 ttggaagaat tgcagaaaaa tcatagaagc agagcgaaag aaaggtagat atgtgaatga
    40261 agaaacagga ttttaaggtg ttaaagacca aagacttgta cccgttcccc gacaatccgt
    40321 ttcatgtggc agaagatgaa acactgtcag agttagcgga aagcatcaag gaatttggca
    40381 ttgtcacgcc gataatcaca cgcccgaaag aggacgggga cggttatgaa gtgattgcag
    40441 gacagcggcg tgtccgtgct tctgaacttg cagggataaa taccgtgcct gcgtttgtcc
    40501 tgcccttaga ccgtgaccga gccatcatca cccttgtaga cagcaatttg cagcgtgaga
    40561 atatcctgcc atcggagcgg gcgtttgctt acaagatgaa atccgaagcc atgaagcggc
    40621 agggtttccg cacagactta acctcgtcac aagttgtgac gaagttgcgg acggacgaca
    40681 aggtggcaca gggcttcggc gtgggcagga tgaccgtgca gcgttttatc cgcctgacgg
    40741 aactgatacc gccgattttg cagatggtgg acgaggggaa aatcgccctc acgcctgcgg
    40801 tggaactgtc cttcttgaag aaagacgagc aggaaaacct ctttgccacg atggagagcg
    40861 aagaagcaac gccctcactc tcacaggcac agcggatgaa acagttaagc cagagcgggc
    40921 ggcttgacat ggatacgata tttgcgatta tgacggagga aaagggcaac cagaaagaaa
    40981 ccttgaaaat caacacaagc aagctgaaaa aatactttcc gaagaacaca acgccgaagc
    41041 agatggagga aaccatcatc aaacttttgg agcgtgagtt gcagaggaaa cgcaaccgtg
    41101 acagccgcta atcttctttt ttcgggaagt aaatacagag agttgaggta tggagaatga
    41161 gagaaatcca gtatgaaatc gtaaaggaaa tcgcagtatt gtctacgggc gacagtggct
    41221 acacaaagga aatcaatctc atttcatgga atgggaaaga gccgaagtat gacatccgca
    41281 gcttttcccc gaaccgtgaa aagtgcggca agggaatcac gctgaacgct gatgaagcgg
    41341 cggcactcct taaagcatta cagaaagaat taaacagcga ggattaatgg tatctgattg
    41401 gcagggcggg gacatttcca aactcttccc tgccctgtct ggaaaggaag atttaagtat
    41461 gggcgaggat aagaaagcag ataaaaagag aaagcgtatc gtgccaaaag caccagtgca
    41521 gatgataatc agccgtgaat atgtcggcac acagaccgtt acagaagcgt ttgtcccgat
    41581 tatctccgag gatattcgga agaagattgc cgagggcgac accttcgaca atgaggggct
    41641 gtccgcttag aatgtacgca atgggacatg aaaacagata ggacagatac ggaggtttta
    41701 cagtatggca ggaatcaaag aagaaaagaa aatctattta gtcggcattt attgccgctt
    41761 atctaaagac gatggtacgg ataacgagag tgcgagcatt gcgacacaga aatccatcct
    41821 cacggattat gtgaaaaagc agggatggca catagcaaaa acgtatgtgg acgatggtta
    41881 ttctggtaca aatttccaaa gaccaagttt ccagaatatg ataaaagaca ttgaaagcgg
    41941 tctgataaac tgcgtgatta cgaaagattt atcccgtctg gggagaaact atcttgattg
    42001 tgggttatat ctggaagttt tcttcccaga gcataacgtg aggtatatag cggtcaatga
    42061 cggcgtagat accttgaata aatctgctat ggacatcacg cctttccgca acattttaaa
    42121 cgaaatgtat gccgctgaca tatctgttaa gataaaatcg gcatatcggg cgaggtttca
    42181 acaggggaaa ttcatgggaa ctaccgcccc ttatggctat atcaaagacc ctgccgacca
    42241 caaccatctg ctgatagatg ataaagtggc acatgttgta aaagagatat tcgaccttgc
    42301 attaaaaggg aatggagttg ccaaaatttg cagacatctt aataaacagc atatcctacg
    42361 ccctgccgct tatgcggcgg agcgtggcga aacaggcttt gaacgtcatt ttgaggggaa
    42421 cgaggacaaa cgctatattt ggagtgggaa cagcgtgagg agcattttaa gaagcccgat
    42481 atatgcggga aatcttgtag gctacaaacg gattgccgcc aatatgaaaa gcaagaaacg
    42541 cccctctaag ctgcccgaag aatgggaagt gatacccaat acccatgagg gaatagtcac
    42601 gcaggaggaa tttgatattg tccaacagct tattacaagt cgtaggcttc cacagaacaa
    42661 gggaggattt gtaaatattt ttgcaggcgt tatcaagtgt gtggactgcg gatgtgctct
    42721 gcgggcaatg aacgtacaca ggaggaaacg cccagagatt atcgactgtg tacagtattc
    42781 atgtaataat tatgcaagaa acggaagaag cgagtgtagt gcccacaata tagaagcaag
    42841 ggatttattc aatgccgttc ttgccgacat caactgtttt gcggatatgg cagtgaatga
    42901 tgaaaaggcg gtcagggcca tagaaaagcg gctcacggaa acagaccaga gcagggcgaa
    42961 agcattagag aaagaacgta agaagctgaa caaacgcctt gcggaactgg acaggctgtt
    43021 ttcctctctc tacgaggata aggtcatgga gcgtattacc gagcggaatt ttgagatgat
    43081 gtcggggaaa taccagaaag agcagcttga aattgaagca aggctgaaag aggtgacgga
    43141 aactcttaat gaaagctacg agaaatcacg gggaatccgt gacttcctcg cccttatccg
    43201 aaattatcaa ggcttaaaag aactggatgc aacagttata aacgcactca tagacaagat
    43261 acttgtttcg gagcgtgaga agatggcaga cggaacagtg aagcaggaaa tcaagattta
    43321 ctataaattc atcggctttg tcgatgaatt acatatcata cctacaaaac ggtgggcagc
    43381 aatgcccgct aaaaattgta cggtgtgcgg cgttgaatat gtcccgggct ctggtgcatc
    43441 aaggtattgt cctgcttgtg ccaagaagat acggagggag aaatcaaacg agagcaaacg
    43501 caggagcaga gaacagaaaa ggatagcatg tatgaactgt ccgcaaaaaa tgaccgactg
    43561 aactacaaca agtgagaaca actagcagga gacattcttc tgcttttttt atagggagac
    43621 aagatgacac gaattaaagc agtaaaacaa aaggccattt taaatgtggc tgaaagtctg
    43681 ggttattcct tcagacgttt atcaggacac atttatgaac acccagacca tgattccttt
    43741 cggatttttg cggataccaa tactttcaaa tggttttcaa gagatataca aggggatgtg
    43801 atagactttg ttcaattagt ggcaggcgtt actttcaaag aggctgtatc ctatcttgaa
    43861 actggggatt ttgaacaagc taagttgata gaagaaactt atcaaccgtt tcaatattat
    43921 ttgcatgaag aaccctttca gcaagcacgt atttacttaa aagacatccg tggcctaagt
    43981 gatcagacta tcaatacctt tggtagacaa ggattgcttg ctcaagctac ttatcaatcg
    44041 gagcccgtat tagtgttaaa aagctatgac cacaacggga ccttacaggc cgcaagcctt
    44101 caaggtctcg tcaaaaatga agaaaaacac gatcgaggtt atctcaaaaa aatcatgaaa
    44161 ggatctcatg gctatgtcgg tattagtttc gatattggga atcctaagcg actcattttt
    44221 tgtgaatcag ttatcgatat gatgagttat tatcagcttt accaaaagca attatccgat
    44281 gttcgcctga tttcaatgga aggtttaaaa ctttctgtga ttgcttatca gaccttgcgt
    44341 ctagcagcag aggaacaggg gaaattggca tttctagata cagtaaatcc aagcagactt
    44401 agtcattatc ttcaggcaat acaagagacg acaaccttct tccaaactca ttcaaatgca
    44461 ttaacattgg ctgttgataa cgatgaggca ggaagagaat tttgtcagaa actgtcagat
    44521 aaaggacttc cgctttctca agatttacca ccattgcaag gacttgaaac aaagtcagat
    44581 tggaatgata ttgtgaaaca gcagagtgaa ctatccttaa gtgattgtat ccaaacagcc
    44641 caagcacaag ttaataagaa tcatcctcca cctaaacgag agcgtgctat ggcattgtga
    44701 taacaaaatc aagtccgcta tcataatcta gaatgtgaca aggaggacac cctatgagtg
    44761 tgattgaacg tctggctgaa aaagtagcta ggcaagaaga aaaggtctca cgtgagacag
    44821 agaaattgga acactatcgt gaccaactac aaacagctat gtacagtacc tttatcaaac
    44881 ggcaacaatc tagtcagttg tcatttcatg aagcactaga gcaagccttt ggtaaagaaa
    44941 ccacactaca accaaattac agaaatgagg atataaaatg agtaaaactt ggaattttga
    45001 tcagccacta gatgatgtga aaccaacatc ttcccatgaa gaacgagcta aaatcgcagc
    45061 acttttccat caacaggatg aaagaccaat tgaagaagta gactatgtgg ctgcttttga
    45121 acaacaacaa aaggagtcaa aatataaaga tgaccaaacg ctcgcatcaa ccgttaaaca
    45181 aagtcagccg aagaaggtaa atatcacaag tgactataaa caacacttgg ctgataccat
    45241 tgcacaaaat aacaaggata tttcagcctg tcaaaagcaa attgaagaac ttcatcaatt
    45301 gattgatgaa aagaaaatcc aaaataaaaa gttgcaggct atttaagtag ccattgatga
    45361 tttataagtc aggtagtcct atgcgggcta cctttttaca attgaaggag aagataatga
    45421 gattttttca aaagaaaata cagaatcaag accgatttaa acaactgatt catcgattat
    45481 cagagatgtc agatactgaa ctaaccaaag tagagaaact cctagatgtg gtttttgatc
    45541 caagtttcaa gtctagtgag agagtagaaa tatctcgaaa ctatataact actgaggaac
    45601 aaagtcttga taagtcgatt caggaagcga aaaataaact gaatactgag cagttggaga
    45661 agcgaataga gcagtttaaa caatcgaaga aacctaaaaa cggataacgc accatttttg
    45721 gtgcgttatc cgttttttat ggtataatga aagcaaatat gaggaggtct ttatctatga
    45781 ttggagacaa catcaagtca ctacgtcgga cacacgattt aacacagcca gaatttgcga
    45841 aaatggttgg gatttcacgc aatagcttaa gtcgttatga aaatggaacc agcaccgttt
    45901 caacagaact catcgaccgc atttgtcaga aatttaacgt ttcttatgtc gatattgtag
    45961 gggaggacaa gatgttaaca cctgttgaag attaccaatt gactttaaaa gtagaagtga
    46021 taaaagaacg tggagcagct attttatcac agctttatag ataccaggat agtcaagata
    46081 ttgcttttga tgatgaatcg aatccgtgga ttctcatgag tgatgacttg gccgaattga
    46141 ttaacacgaa aatttacctt gtcgatactt tcgatgaaat agagcgttac aatggctatt
    46201 tagacggtat cgagcggatg ttagacatgg tgcatcatcg ggtggtggct taatgaggtt
    46261 ggaagaattt agtgaagctg agtttcagaa ggctttacag caaaccattc gggctttaac
    46321 ccgaggaaag acgattccag atcgaccaaa agctatcttg cttggaggac aaagcggggc
    46381 aggtaagact actattcatc gtatcaagca aaaagaattt caaggtaata tcattatcat
    46441 cgatggtgat agctaccgtt ctcagcatcc caactactta gccctgcaag aaaagtatgg
    46501 caaggacagc gtggactata ctaagggatt tgcaggaaaa atggtagaac agttggttga
    46561 tgaactcagt acgcaaggct accatttgct gattgaggga accttgcgaa ctactcaagt
    46621 tcctcgtcag actgctcaat tattagcttc gaaaggttac caagtttcct tagctgtgat
    46681 tggtaccaaa ccagaattgt cctatctcag taccttgatt cgttacgaag agctttatgc
    46741 catagatccg actcaggcca gggcaacacc aaaagaacac catgctgggc ttgtcgagaa
    46801 cttggttgat aacctaaagg agttagaaag agagcaactc tttgaccaga ttcagattta
    46861 tcaaagagac aggacttgca tttatgattc tgcaattgat gaaggctccg cagcagaagt
    46921 gttacaagag tgtctctttg gaaaatggag caaggtagag gaggagatgg tgaaggagag
    46981 tgaactccta cttaatgaat tacttgagaa aaataaataa ttgattttaa agataatatt
    47041 tttttggggt tagaattgcg aggatttaat aataagataa aatctgttta tcgagaatta
    47101 acaaatacca aagagaaatt cggtagtttt cataagacct tgattcattt acatacacct
    47161 gtttcttatg attataagct attttcgagc tggacttcaa cgaaatatag aaaaagtaca
    47221 gaagatgaat tatttgatat atttttcaaa aataagaaaa tcaaagttga taaaacaaaa
    47281 ttttttagta gctttgataa agttgtcttt tctagcccaa aagagtacat tagttttctt
    47341 ttgttagcag aagctatctt aaaaaatgaa atagaaatag ttgtagtaac tgatcataat
    47401 actaccaaag gtattaaaaa acttcaaaca gcagtttcaa ttataacgag aacctatccg
    47461 acttataata tacatcctca tattttacat ggagtagaaa ttagtgcagc agataagtta
    47521 catattgttt gtatatacga tcatgaaaaa gaatcttggg ttaatcaatg gttatgtgaa
    47581 aatattataa gtgaaaaaga tggaagttat cagcattcgt tgactatcat gaaagatttt
    47641 aataatcaaa acataattaa ctacattgct catttcaata gttataatat tttgaaaaaa
    47701 ggttctcact tgtcgggtgc atataagaga caagttttta caaaagaaaa tacacgattt
    47761 attggtgtaa aaaatataaa ttctgttgaa ggatcgaaaa atcgtttatt gacagatttt
    47821 aattgtgaac caaatttttt attagataat gattcacatg atattgattc agtcggaaag
    47881 aataatatgt ggataaaagg tggaaagatt tcttttaaaa tgttccaaga agctttgctt
    47941 gattacactg tatcagtaag tttatttgaa ccaaattttg aacaaaagtc ttacataaaa
    48001 ggtttataca ttcaaagtcg tggaggcgat agaagttttc ttacaggtga taagttagaa
    48061 aaagatagag acttcttttt aacattctca ccatctatga actgtttaat tggagggaga
    48121 ggtacaggga aaagtacact aatagatatg ttacaatttg tactttctca ggattgcgac
    48181 aagcagagta aattagaatt cctatgtaac catgcaaatg cttttgtact ctatgtttta
    48241 gaggatgctg aatatatcat tgaggttagt ttgccagatg tcttgcagga aaataaggac
    48301 aatatcttac aatattatgg gcaaaatcgt gagaataggt atggatatcc ttataactgc
    48361 aattctgact ctatcaaaga gtggacacgc tctcaatata cgaaagtata caaagttgag
    48421 ggaaaatttt tcaaattagt tgataaaact agaatattag aaaaaatgtt tgataggaga
    48481 tattctgtta atgagttggt tagaacagcg gatggagaaa aaattacaga atttatttcc
    48541 gacttaatgc taaaaaataa aaatttaccg agaccaaact atggtttaag aactcagact
    48601 ctagaatcat tcgaagctaa actacaggaa cttgataaat ataggagagt tcgtaaggat
    48661 tcaatactca aaataattga tgatttcaat caaactcaag ttggtaagtt aagaatctgt
    48721 tatgagcaaa ttgatagatg ggaagtacca gattttgaaa gcactctttt caaaagtaat
    48781 tcaactctca atttctcatt tgaaaattat agaattagta agcgggatgt tgcagatatt
    48841 ctataccttg tttatcagga gttaggaata aaaggatttg ttaacgttat tttgaaacaa
    48901 aatattccta ataggtattt tatattatta aaaaatattt ctgaggagaa ttttgcaaaa
    48961 catgagaata agtggagaaa taattccgag attaatgatt ctaacatacc ctatttaaaa
    49021 actagtattt attctttaat cgcaaatagt agtttactag atgagttaaa gagagtgcta
    49081 aaagaacatg tagccaatga aagacttttt ttggagttta acattaactc aaaagaaaca
    49141 tcacaacatc ttgacattct ttataaagaa gttagtgtat taagtttggg tcaaaaagtt
    49201 gtagcgatgt tagatttttt actagcatat agtgattatt caaaggattt cagaccatta
    49261 attattgatc aacctgaaga taatttggat aaccgctata tatacagaca tttagttcaa
    49321 cagtttagag acgtgaaagc tcaacgacaa attattttag caacccataa tgcgacaatt
    49381 gtaacaaatt ccatgaccga tcaagtggta attatggaat cagatggggc tcatgcttgg
    49441 attgaatcac agggatatgt tagtgaaaaa tttataaaaa accatattat caatcaattg
    49501 gaaggtggaa gagactcatt taaacataag atgtccatat atgagacagc tctttctgaa
    49561 taatataagg aaatgaaaag taggttagaa atatcctact ttttgttttg tgatactttt
    49621 tccaaatcac ctctattatc ctaatatcat tcctaagaaa atcaagtgtt gattttctac
    49681 tgggggtttg ggggcgaagc caccaagtta tcttatcgtc agctatcaaa actcaaaggt
    49741 tttggtcagc tggcgatatg attttgggga tattgtggac acaatatctg agctcgcaaa
    49801 gaccgaacaa ggagagagtg aagtctttag gaagcgtact gacaatgtga ggcagcctta
    49861 cattgtcaga caaatatcat gttgaaagga tagtaggatg ggacaagaaa ttaagttaat
    49921 ccgtaagcaa tttagaatca cgagacaaga agaaaaacag ataaaagaaa tgatgaggga
    49981 acaaaaagtg ggtagtttct cagaatttct tcgtcaaaat ttgttgaaaa agaattatca
    50041 ggatagaatt tttgaaagtt ggttttccct ttggcagtct caaaagtttg aacaaattag
    50101 tcgagatgtg catgaagttc tagttgtcgc aagagaaaat caccaagtga ctcaagaaca
    50161 cgtttcaatc ttattgacct gcgttcaaga attgattgcg gaagtcaatc aagtacagcc
    50221 actcagtcgt gagtttcgtg aaaaatatat gagatagggg gctactatgg tttatcgtta
    50281 tcgtaccaat ctcaaaaaag tatttctaac agattcagaa ttacatcaat tgaatgaacg
    50341 gattgctaag agtcattgtc aaaatttctc agtatatgct agaaaagtgt tgctgaatcc
    50401 caatatgtca tttgtcacca ttaacacgga tacctatgac cagttagtat ttgaattgag
    50461 acggattgga aataacatta atcaaattgc gcgtgcgatt aatcaaagtc atctgatttc
    50521 tcaagaacag ttacaagaat taagtaaagg agttagtgag ttgattactg gagtggagaa
    50581 agaatttcaa gtggaagtga agagactgag ggagtttcat ggtagtcact aaacactttg
    50641 caacgcacgg gaaaaaatac cgtaggcgtc tgattaagta tatcctcaat cccggtaaaa
    50701 cagacaattt gaaattggta tctgattttg gcatgagcaa ttacttagac tttcctagct
    50761 atgaagaaat ggtagaaatg tacaatgtca actttaccaa taacgacaag ttgtacgaat
    50821 ctagaaatga ccgacaagaa aaacaccaac aaaatattca tgcccatcac ctcatacaat
    50881 cattttctcc cgaggataat ctgacacctg aagaaattaa ccgcattggt tatgagacca
    50941 tgatggaatt aacaggaggt cgttttcgtt tcatcgtagc gactcataca gacaaagatc
    51001 atgttcataa tcacatccta atcaatgcta ttgaccgcaa ttcagataaa aagttgatat
    51061 ggaattatgc cttggaacga aaccttcgca tgatttcaga tcgcatttct aaaatggctg
    51121 gagcgaaaat tattgagaag cgtttctctt accgtgacta ccaaaaatat aggaagatta
    51181 gtcataaatt tgaattgaag cagcgccttt attttttgat gcaacagtca aagtcctttg
    51241 atgatttttt agaaaaagca gagcagctac atgttcatat tgattttagt cagaagcata
    51301 gtcgattcat gatgacagat agatccatga caaagccaat tcgaggacgc caactcagta
    51361 aacgagagct atatgatgaa gactttttcc gtacatattt tgccaagcta gagattgaaa
    51421 atcgattaga atttttgttg aaccgtgtta attctttgga aaagttactg acaaaagcga
    51481 aagaattgaa tctaaccatt gacttaaaac aaaagaatgt aaccttcata cttgaaaaaa
    51541 atggaaagca gatatgtctg aatcataaaa aaataagtga caagaaatta tatgatgtca
    51601 atttttttca agattacttt aaaaataagg aagtaggtga ttcaggagga ttagagaatt
    51661 taaaggagca gtaccatgct tttcaagaag aacgagataa ggataaggta tccactaaag
    51721 agattgagga agcctttgag acatttaagg aaacacgaga tgccgttcac gaatttgaag
    51781 tggaacttgc aggacaccaa atagagaagt tagttgatga gggcgtttat atcaaggtgt
    51841 cttttggtgt aaagcagagc ggttttattt tcattcctaa ctatcaatta gatattcttg
    51901 aagaagagaa tcagacaaaa tataaagtct atatccgtga gacaacctca tactttatct
    51961 ataacaaaga acattcggat aagaatcagt atataaaagg acgaaccttg attagacagc
    52021 taaccaacga tagtcgagca ataccataca gacgaccgac tgttgaaaga cttcaagaaa
    52081 agattactga gattaacctc ttgattgagt taacagagac agacaaaaga taccaagacg
    52141 ttaaagacga actggtcgca gaaatagcag agctagatgt caaactaaat caaaccaatg
    52201 aaaaaatcgc caccttgaat aagatggcgg aagtgcttat caacctaaag agtgatgatc
    52261 cgaatagtcg aaaactagca aggtatgact tttcaaaact aaatttgaca gaatcaatta
    52321 cactagaaca agtgactgaa gaaattaagc tattacaaga aaaatttagc ttatatctgg
    52381 atgagtatga agggctggta agtagaatag aaaggtttgt aaaaattctt aatacagata
    52441 tagacttgaa attccaagag aatgtctcac tagaataaac tattacctat aggtttaatt
    52501 aataaaaatc aaggagagtt tttgctataa aaaataagga agaaatctat cgaaagaatt
    52561 gataattggg cgattgataa aggtatcctc aaaaatatct tcaaccaata ctatctaaag
    52621 taatagtagt ttggaagtat tctccctgtt gactagatat aaacatatca ccaccatgca
    52681 aatcaacaat ttgcttagta atttttaagc ctataccact cctacgaact ccagaaatat
    52741 caaaattaaa ttcttcaatt ttattgatat tgttaagtct atccacagat gttcccactc
    52801 cattatctag tatagtaatt aaaaatctgt cattggtcag agatttaaga ataatctgaa
    52861 tatcacatcc agaggggtta tgtaaaacag aattgtaaat caaattatgg attatcctag
    52921 aaacaagaga tttttcgaca tacatttttt tgttatataa attttcatcg gcagtaaatt
    52981 caaaattgaa atcgtgccaa atttcttgat taataatttg aatgattata tctttaaaaa
    53041 atggaataat ataaataatt tcttgtttca atatcagatt tccgtttgtt aatctagcaa
    53101 atatatttag gtcattgaga aggttctgga tataatgact ttcaactaaa gtaggagtta
    53161 aatatttgag tagagtgtcg ttatcagttt tctcaatggc taaagatatg ttggatacaa
    53221 taactgaaag aggagttttt atgtcgtgtg caattccaga aatccaatct tctttaaact
    53281 cttcattttc acgaagtttc tgattggcag aattaatggc gaatgttaat ttatctagtt
    53341 cttttactga tttaacttgt gtatttacac cgttcggtaa ttttacaatt gcagaaataa
    53401 ttggcttgat atttctatct agaaaagtaa tactataaat gtataaaatt aagcaaaata
    53461 atatgttagc aaaaataatt gataggataa tgatgggaaa aatttgaatc ctgctcaaat
    53521 caaaataatt attactatag cgaataatac tatctttcgg gaatgcaata atatatatat
    53581 cctgatcatt ttcttttatt tgagtaaata caggatagtc ttttaaataa aatctggaga
    53641 aacgaataac atctgcaaaa tcaaattgat tagctatatc tttaggttta tcaatattaa
    53701 atttttcttt tccactattt ttgtcaataa tcataatcca taagttatta ttatcgatta
    53761 attctttggc tttttgactg acagtataat taccatcaga taaaacaatt tctgatgata
    53821 ctgtttctat aatgttggag gcagactgtt ggctacgtat atagtttgct gctacagtta
    53881 gaagtactat atcaaccatt atgatgaaaa taaacgataa aataaatttt aatatattct
    53941 ttttgaaaat attcataaga tctcttattg tttaaatagc aagtttatat ccaagccctt
    54001 taacggtaat tagatgcttt ggcttggaag gtataatttc gattttttct cgaatattgc
    54061 gtatatggac cattaaggat ttttcatatc caaagctatc taatccccaa atagtatcac
    54121 atattgtctc tgtggaaacg atgtaatttt tgttggtaaa tagctttcta agaatttgaa
    54181 tttcagtagg ggtcagtgaa aaattttgat tacttttttt tacgcttgca ttattcaagt
    54241 caattgtgca atctgttaat tcaatgagtt cagattcatc tcggtaagct cttctcaaca
    54301 atgccattat acggtaagtt aaagatttag gtaaaaatgg ctttgtaaca tagtcatctc
    54361 ctcctgagtc aagcccattt atttcatcat caggattatt tttagcagtt aagaatagaa
    54421 ttgggacatc agatgtcttt cttacatatt tggaaagtaa atagccttca ccatctggta
    54481 acatgacatc tagaataatt aaatcaattt gagatactga aaaaatatca ataccttcgc
    54541 taatactata agcaaaacta atatttttga agccacgact catgagcact tctttgattg
    54601 attcgcttaa tgcgatgtca tcatccacaa ttagtatatg tttattcaac aattgtattt
    54661 caaaacccat acttttacct ccaatgttta tataaattat atcatacaat aaagttatcg
    54721 ggtttattta gccttactca gaatgaaaat ataataagca tacaaatatt ttatgacttg
    54781 acaatcatat aataaagatt gaaataatat ttaatgttgt tattcgaaaa ataaaacaag
    54841 ttatagataa aaatatatta tttcaagggc ctcactaact aaattaaaat atttggagat
    54901 taaaaatctt aaagttaaat ttatgttttc tttatacaga ctttaagata ctcctgtaag
    54961 atgaacttgt aacaaagaag atatcgatat tgtcggtaat aaaaaataga aagaggaaaa
    55021 tgttatgaaa gataactatg aattaatga
//
LOCUS       DASFQS010000005        52916 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.005, whole genome shotgun sequence.
ACCESSION   DASFQS010000005 DASFQS010000000
VERSION     DASFQS010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 52916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 52916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..52916
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.005"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            127..390
                     /locus_tag="U1041_000247"
     CDS             127..390
                     /locus_tag="U1041_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019775469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HEM4767391.1"
                     /translation="MASKDFHIVAETGIHARPATLLVQTASKFASDITLNYKDKSVNL
                     KSIMGVMSLGVGQGADVTISAEGADADDAIAAITETMEKEGLA"
     gene            395..2128
                     /gene="ptsP"
                     /locus_tag="U1041_000248"
     CDS             395..2128
                     /gene="ptsP"
                     /locus_tag="U1041_000248"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEM4767392.1"
                     /translation="MTEMLKGIAASDGVAVAKAYLLVQPDLSFETVTVEDTNAEEARL
                     DAALAASQNELSLIRENAVASLGEEAAAVFEAHLMVLADPEMIGQIKETIRAKKTNAE
                     TGLKEVTDMFIAIFEGMEDNPYMQERAADIRDVAKRVLAHLLGVRLPNPATIDEESIV
                     IAHDLTPSDTAQLNKQFVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITEIVKDGD
                     VLAVNGITGDVIINPTEEQIAEFKAAGEAYAKQKAEWALLKDAQTVTADGKHFELAAN
                     IGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDEQYEAYKAVLEGMNGKPVVVR
                     TMDIGGDKELPYFDLPHEMNPFLGFRALRISISETGNQMFRTQLRALLRSSVHGKLRI
                     MFPMVALLTEFRAAKAILEEEKANLLAEGVAVADDIQVGIMIEIPAAAMLADQFAKEV
                     DFFSIGTNDLIQYTMAADRMNEQVSYLYQPYNPSILRLINNVIKAAHAEGKWAGMCGE
                     MAGDQQAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYAHRALTECATAEEV
                     LELQKEYVDFD"
     gene            2337..3761
                     /locus_tag="U1041_000249"
     CDS             2337..3761
                     /locus_tag="U1041_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000199391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent glyceraldehyde-3-phosphate
                     dehydrogenase"
                     /protein_id="HEM4767393.1"
                     /translation="MKAYNNYINGSWVGSEKSIAIHSPINQEKLGTVPAMSKEEVDKA
                     MDAARKALPAWRALSAFERAQYLHKAANILEERKDAIGEILAKEVSKGIKASIGEVDR
                     SAHLIRFAAEEGLRVYGSSLEGGTYEPTAKSKVSLVRREPVGIVLAIAPYNYPVNLSA
                     SKIAPALIGGNVVMFKPPTQGSISGLLLAEAFADAGIPAGVFNTITGRGSEIGDYIIE
                     HPEVNFINFTGSTPIGQKVGKLAGIRPIMLELGGKDAAVVMEDADLDHTAKEIVSGAY
                     SYSGQRCTAIKRVLVMDSVADELAAKLKAEVEKLTVGDPFENKDITPVIDEQSAEFIE
                     GLVRDAQAKGATELTPYKREKNLIWPTLLDHVTPDMEIAWEEPFGPVLPIIRVSSLDE
                     MLELCNQSEYGLQSSIFTSNYPFAFDFASKLEVGTVHINAKTQRGPDNFPFLGVKGSG
                     AGVQGIRYSIEAMTKVKSVVFDVQ"
     gene            complement(3981..5468)
                     /locus_tag="U1041_000250"
     CDS             complement(3981..5468)
                     /locus_tag="U1041_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1846 domain-containing protein"
                     /protein_id="HEM4767394.1"
                     /translation="MKKIAFDSTKYLNLQRDHILERIAQFEGKLYMEFGGKMLEDFHA
                     ARVLPGYEPDNKIKLLQELKDQVEIVIAINASNIEHSKARGDLGISYDQEVFRLIDTF
                     NDIDIYVGSVVITQYRNQPAADAFRKQLEKHGIKSYLHYPIKGYPSDIDHIISPEGMG
                     KNDYIETSRNLVVVTAPGPGSGKLATCISQLYHDQLHGVTSGYAKFETFPVWNLPLHH
                     PVNLAYEAATADLDDLNMIDPFHLQTYGKTAVNYNRDIEVFPVLNRTFERILNKSPYA
                     SPTDMGVNMVGYSIVDEEAAIEASKQEIIRRYYQTLVDFKAERVSEQAVKKIELLMNE
                     VGVTPADRKVVIAAREKAELTTSPALAIQLPTGEIVTGKTSDLLKPTATVLLNAIKQI
                     ANIDDEILLIEPNYIRPIQELKADYLDKTNTRLDASEILNALAITAQDSPLAARAMKE
                     LGQLNGSEAHSTVILSDEDKSVLRKLGINLTFDPIYQHNKFYQAK"
     gene            5742..7013
                     /locus_tag="U1041_000251"
     CDS             5742..7013
                     /locus_tag="U1041_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4767395.1"
                     /translation="MKKLVNNKLFLSSFVADLISNFGDTLYYLALMNYVLLLPDTKFA
                     LGMITASETLPILAGLFIGIWADKTKNKLDTILATLLVRVGLYTLVGFLMGFTPALWV
                     VAVVCVINFLSDLAGQYENGLYMPVSLRVVAAEDRETAMAFKMTVKNLLQIAFQASGA
                     ILIGFMSYQNLAFFNAGTFLVSLAIMAGLRPAFAKLLKESPIQEVEQTETEAGLIKGI
                     GQSIKDSYQAVQNIPVLKASIITIASLNAIFTALSPLAILNMKEFSDFVIVNAGTTVA
                     LISILFSVGSILGSSIGMALFKNVSLVNLLKFSTLMPVLLFSGFFLHNIYVVLAVIFV
                     TAVTLGIFNPKMSALVMNELPEDKLATVGGGIDAFCQIGMVAGQALVAIMVTVLSATS
                     ISLIFLLLSVGLVSYTILVGRRPKNEVVVKA"
     gene            7025..8065
                     /locus_tag="U1041_000252"
     CDS             7025..8065
                     /locus_tag="U1041_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HEM4767396.1"
                     /translation="MKLDYRDYRSEIVEKFFIPLIVKEREEPFEADFSQKEKDILKDA
                     LDIRDEMEEKLADFRQEVNQVFVWGHIFNILHSLYFYLLNDGQDPKTVEEACQLILKL
                     SQAEVEDAMRTMLASENDGHREKTLSLMELLEKTDKKPADKWYWSLAIRNPLETVQRS
                     VHLLDKMLPIYQPYFELARAEREKFAREFDIEKLYQESKRLSMTSLDALSVENAQFFV
                     LSPWNYWFAYYGNEQFDYMKVALLASCRIDQIMLSNDELDLDDLTTALKVISDSTRYQ
                     VLVELTKPHAKSKDIAERLAITGAAVSFHTQKLINGDLLLFNAKDKNVKYSVNRDLIQ
                     QVIDKLKEDFDL"
     gene            complement(8280..9287)
                     /locus_tag="U1041_000253"
     CDS             complement(8280..9287)
                     /locus_tag="U1041_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767397.1"
                     /translation="MQNKTKPLNTSLLSLIQFIGAILVIALHCRRLFEADPLHFIQKS
                     IFSRMVVPYFMVTASFFLRRNYPSLSKQYLIRYSKQYLTWSALYLPFYLFYLTLQEIP
                     LPYYPLALLVGLTYTGTSYQLWYMPAFLLGLVLVHFSLEKWGWRITAYLACLLYLLGS
                     VETYSSYLTESIFLTAFDSYKTFFFTSRNGLFYAPIFVLTGFYLADKLNQPIFQYRQK
                     TKLLVCTALLAFEATIIYLNQGYDKNFLFSLIPFTAYLVAWTLTTDLFRQKKFQFLKG
                     YASYYYFIHVIPVEISFFFLETSSLTKIQQGWLVFFITIITCQLLSWLIINTQRKSKT
                     D"
     gene            9477..10163
                     /locus_tag="U1041_000254"
     CDS             9477..10163
                     /locus_tag="U1041_000254"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEM4767398.1"
                     /translation="MKDLRAKLLADFGIDFSDLNLLETAFTHTSYANEHRLLKISHNE
                     RLEFLGDAVLQLMISKYLYQKYPDSPEGEMSKLRSTFVREESLAGFSRACGFDRFLRL
                     GKGEEKSGGRNRDTILGDAFEAFLGALLLDKGEKTVEEFIHKVMIPRLEKGNFERVTD
                     YKTALQEILQVNGEIAISYQVIAESGPAHDKTFEVEVSADQRVIGRGRGRSKKLAEQA
                     AAKNAVEARG"
     gene            10166..13699
                     /gene="smc"
                     /locus_tag="U1041_000255"
     CDS             10166..13699
                     /gene="smc"
                     /locus_tag="U1041_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEM4767399.1"
                     /translation="MYLKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESL
                     RWALGESSAKSLRGGKMPDVIFSGTESRKALNYASVVVTLDNSTGFIANKQKEIKVER
                     HIYRSGDSEYLIDGQKVRLRDIHDLFMDTGLGRDSFSIISQGRVEAIFNSKPEERRAI
                     FEEAAGVLKYKTRKKETESKLAQAQGNLDRLDDIIYELDNQVKPLEKQAQTAKKFLEL
                     DGQRKELYLDVLVAQLSLGKEKLSEKESELESVKTELTSYYQQRSELEQENQNLKEKR
                     HRLSEQLEREQAVLLDLTKLISDLERKIEVHKLESSQNESSRQEAQARLENLLTRREQ
                     LAEQIEQKQEMLTQLDSSLSSLKDDIATVDKEISYFSEDPDQVLDHLREQYVALMQEE
                     AEASNRLTKIQQDIANQISLSESKSEDLARLQTEKQTAQEVLDKSRKSLEEADHVLRQ
                     LLESYQTKKTELDQVQTAYQAEQGRLFDLLDQLKGKQARQSSLEAILKNHSNFYAGVK
                     AVLQAAPSLGGIIGAVSEQLTFDTRYQTALEIALGGASQNVIVEDEATAKRAIAFLKE
                     KRQGRATFLPLTTIKPRQLSGQQVSLLESSEGFLGLASDLVTYQPNLDAIFQNLLGTI
                     AIFDTIDHANQAARATKFQVRMVTMDGAEIRPGGAFAGGSNRNNSTTFIKPELDALLG
                     EIAELSSQLQEQESLVAAKKTSLDQTRETLETIKAEGEEARLNQQSARIHQEQAENRL
                     AQLSAQYDLQMSQVSPTILTELEEAAAKEEVNVQALNEKKLALDQQINQVRDNRDSIQ
                     ESLQKLQTQKGQLTLEQAELTSQLRFEQTDLRRLQEEKVVADKEISLLEDMIDQKLEA
                     LEDTSIEILEEQLQAASDKQNQTNQILIRLKFELEDIDGQFEDLEERLQQARTKNDDL
                     IRKQAKLEADCEQAGDKLRTLLGNLTEHFKLSFEAAQSQAKEVENLAVAEQSLKDLER
                     AIRALGPVNLDAIEQYDEVNNRLTFLNEQRTDILSARDLLLDTIHEMDDEVKERFKVT
                     FEAIRESFKQTFKQMFGGGSADLILTEGDLLTAGVEISVQPPGKKIQSLNLMSGGEKA
                     LSALALLFSIIRVKTIPFVILDEVEAALDEANVKRFGDYLNRFDKESQFIVVTHRKGT
                     MAAADAMYGVTMQESGVSKIVSVKLKDVEKL"
     gene            13696..14505
                     /locus_tag="U1041_000256"
     CDS             13696..14505
                     /locus_tag="U1041_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4767400.1"
                     /translation="MINKIYASDMDGTFLLEDHSFDKERFRRILNQFKEKGYLFVAAS
                     GRSMQSLKLVFEDFVDEIGFVAENGSIVEYQGQTIFMDDPISPEIYLPIIAGIDAGPF
                     GSSQSMVLSGLENFYLLKNAEPQFLEAMTNYYAHFRLVDTFEEVREEIIKINAKFSPE
                     EMDDARRWLNDTFEGVTAMTTGFDNIDIIPNGSNKSVGLSHLCAHFGITSQDVVAFGD
                     NQNDLDMFDFAGLALATENAREDVKAKADSIIGHCNDGAVLAYLEEEVNGN"
     gene            14495..15307
                     /locus_tag="U1041_000257"
     CDS             14495..15307
                     /locus_tag="U1041_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEM4767401.1"
                     /translation="MAIKLIALDLDGTLLTSDKRISEANKKALQAARERGVYVVLTTG
                     RPLQAIGTFLEELDLLGENQYSITFNGGLVQENTGRVLDKVGFTIEDVRTIRRVTNDL
                     DLPLDVLYGGDVYSLPSAHESLYLTCNPLLNKIVASDEEMPEDFVYNKAVSAVDAAFL
                     DAQIPKIPAELHERFEIFKSRDILLEWSPKGVHKANGLAKLIGHLGIDQSEVMACGDE
                     GNDLSMIEWAGLGVAMANATDEIKSAANLVLPKTNDEDGIAWAIEHYVLNED"
     gene            15309..16583
                     /gene="ftsY"
                     /locus_tag="U1041_000258"
     CDS             15309..16583
                     /gene="ftsY"
                     /locus_tag="U1041_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEM4767402.1"
                     /translation="MGLFDRLFGQEKQEEQVALVEDVETEQSASSEDTVTTEVESATQ
                     EMEEFQSEVAEPELTAEQEAQKQRTLDMMAQYYVAKEAAAARVKEAQEQGFDPAIQTK
                     VKEEPVEEVAPVEQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
                     ILSDVGVQVASTLTEELRYEAKLQNAKKTDELRRVIIEKLVDIYEKDGQFSEQINFQD
                     DLTVMLFVGVNGVGKTTSIGKLAYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDV
                     PVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKDNLMAELEKIGRIIKRT
                     LPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELD
                     IPVKLIGFGEKIDDIGEFKSEEFMRGLLEGLV"
     gene            complement(16629..17303)
                     /locus_tag="U1041_000259"
     CDS             complement(16629..17303)
                     /locus_tag="U1041_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM4767403.1"
                     /translation="MNEIDTILNQLQAASHAGTLKRYEKIGETKPYYGVPMGAISGIA
                     KTYKNRLDLFAPLWQTGILEAQYLAIQLAKTKPDQLALADLENCLDEQVSVNVLDKLA
                     SIILSKRKDSRDWEETLLAQKPAIFQRIGWFLRAKYFAGKTATNQEIEETLDHIRQHL
                     QTADPLIQWTMNQCLVEIAVAYPNYLEQGLAIGQELAVYADMKVPKGCTSAYAPDWIE
                     ALLRKK"
     gene            complement(17504..18991)
                     /locus_tag="U1041_000260"
     CDS             complement(17504..18991)
                     /locus_tag="U1041_000260"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000096131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEM4767404.1"
                     /translation="MSSHVLFTIFGASGDLAKRKLYPSLFRLYKAGHIKENFAVIGTA
                     RRPWTKEFFEQTVIESLGDLPDTPRQAHEFASHFYYQSHDVNDTEHYVALRKLQDDLC
                     EKYDTQHNKVFFLSMAPEFFGTIAKHLKSEQIVDGQGFERLIIEKPFGTSLATATKLN
                     DELAAAFNEDQIYRIDHYLGKEMVQNIFAVRFANIIFEHIWNRDYIDNVQITFAEAIG
                     VEDRGGYYDHSGALKDMVQNHALQVLSLLAMDKPASFKEEDVRAEKIKVFQHLRQPSD
                     EDLKRNFIRGQYAAGSIDGKDYVSYLDEPNIAEASQTETFAGGVFFVDTDRFRDVPFF
                     FRTGKRLTEKGTRVTITFKHAEDIFGQPSEANVLTIFIQPTEGFMLSINGKEVGSHFA
                     LTPAKLNFRHNATALGNSPEAYEKLFFDVLNGDSTNFSHWEEVKASWSLIDRIVDLWA
                     SNQVPLHTYPAGTMGPEAAFDLLESYGCKWVWTPDVWYRERGLLK"
     gene            complement(19070..19885)
                     /locus_tag="U1041_000261"
     CDS             complement(19070..19885)
                     /locus_tag="U1041_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000617844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03943 family protein"
                     /protein_id="HEM4767405.1"
                     /translation="MIRFLILAGYFEMTMYLYISGKLDQYINLHYSYLAYLSMVLSFI
                     LAIVQLYVWVKEIRVHSHLKSKIAKLSSIGLLLIPLAIAWLFPTVSLDSTTVAAKGYH
                     FPLAAENDTNTQNQEGTTVQYLKPDTSIYFTKSAYQNQMREIADRYLTEETIVVTNEN
                     YMEVMEAIYDYPTEFSGKTIEMIGFVYNDPDNSQQFFLFRFGIIHCIADSGVYGLLST
                     GATTEFPNNTWVKARGTIKVSYHTSLKQNLPTLELQSMVQIEQPDSPYVYRVF"
     gene            complement(19882..20787)
                     /locus_tag="U1041_000262"
     CDS             complement(19882..20787)
                     /locus_tag="U1041_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM4767406.1"
                     /translation="MLGLDQLPTSVLQAGAIFLSIMIEALPFVLIGAIISGFIDVFIT
                     PDKVRKLLPKNKFLAILFGTFIGFIFPSCECGIVPIVNRLLEKKVPSYTAVPFLVTAP
                     VINPIVLFATFTAFGNSLLFALYRALGAIIVSLVLGIILGFFVKGPILKGSKFDHHQH
                     DYSDKTSWQKVSFALIHAIDEFFDTGRYLVFGCLFASLVQVYIPTAVLTTIGHSPLTA
                     ILLMMLLAFLLSLCSEADAFIGASLLSSFGFAPVMAFLVIGPMVDVKNLLMMKHYFKG
                     KFIAGFIITITLVILGYSLILGGVV"
     gene            complement(20789..20935)
                     /locus_tag="U1041_000263"
     CDS             complement(20789..20935)
                     /locus_tag="U1041_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767407.1"
                     /translation="MAITYKRQDDLEKMLEEFASFEKLEEIEYPDPKSKENSGKNNLN
                     QDKK"
     gene            21058..23016
                     /gene="ligA"
                     /locus_tag="U1041_000264"
     CDS             21058..23016
                     /gene="ligA"
                     /locus_tag="U1041_000264"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011837172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEM4767408.1"
                     /translation="MKTRISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELET
                     AHPELILPDSPTHRVGGKVLDGFEKYNHVYPLFSLQDAFSREELEVFDQRVRKEFPQA
                     TYICELKIDGLSISLTYEAGNLVVGATRGDGSVGENITENLKRVADIPLTLPEAVDIT
                     VRGECYMPKASFDRVNKQRQEAGEAEFANPRNAAAGTLRQLDTGVVAQRGLATFLYQE
                     ASPSEATSQSQVLEKLDALGFVTNHEYCLAESIDDTWDFIEKIAERRDDLPYEIDGVV
                     IKVNDLAIQEELGFTVKAPRWAVAYKFPAEEKEAEILSVDWTVGRTGVVTPTANLSPV
                     QLAGTTVSRATLHNVDYIAEKDIRIGDTVIVYKAGDIIPAVLKVVDKYRKEQEIMPIP
                     SHCPSCQSDLQHYEDEVALRCINPICPSQLMSKLEHFASRDAMNIAGLGSSIVEKLFG
                     AGLVHDVADIYKLTVDDLLTLEGFKEKSADKLYQAIQTSKSNSAERLLFGLGIRHVGS
                     KASKILVEKFGDLETLAFADQEAIASLEGLGQVIAKSLTTFFASEGAQQLLAELKEAK
                     VNLTYLGQVVDENAALSGMTVVLTGKLERMKRNEAKAKLEALGANVAGSVSKKTNLVV
                     AGTDAGSKLTKAQELGIEIKDEAWLESL"
     gene            23027..24070
                     /locus_tag="U1041_000265"
     CDS             23027..24070
                     /locus_tag="U1041_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HEM4767409.1"
                     /translation="MEERKRARLIYNPTSGQEIMKKNVAEVLEILEGYGYETSAFQTT
                     AEKDSAKNEATRAALAGFDLIIAAGGDGTINEVVNGIAPLEKRPQMAIIPTGTTNDYA
                     RALKVPRGNPVEAAKVIGKQQTILMDIGLAKNQKNGFHQEHYFINIAAAGTLTELTYS
                     VPSQLKTMFGYLAYVVKGAELLPQVQFTPVRVEHDEGVFEGSVSMIFVALTNSIGGFE
                     QIVPDAKLDDGNFTLLMVKTGNLFEILHLIRQVLDGGKHIESDLVEYIKTKSLSIENL
                     NPDNRLLLNLDGEFGGEAPVRLYNLSNHIEFFADTDLVSDHAITLDTDQMNREDMAKR
                     FIEETDHIDGAIK"
     gene            24207..24407
                     /locus_tag="U1041_000266"
     CDS             24207..24407
                     /locus_tag="U1041_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEM4767410.1"
                     /translation="MSLGALALGLACLGVSIGEGLLVASYLSSTARQPEMQSKLMAGV
                     FLGVAFIEGTFFVTLAMTFVLK"
     gene            24444..25160
                     /gene="atpB"
                     /locus_tag="U1041_000267"
     CDS             24444..25160
                     /gene="atpB"
                     /locus_tag="U1041_000267"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEM4767411.1"
                     /translation="MEEHLSPTLTLGPVTFDLTMVLVSVITISIIFLLVFWASRRMEL
                     KPKGKQNVLEYVYELTINFTKGNLGDAEAKRYSLFFFTVFTFLLVANNLGLMTKLETA
                     EGHNLWTSPTANMAYDFGLATIATVFCHVEGIRRRGFKAYLKSFVTPWAMAPMNILEE
                     VTNLVSLALRLYGNIYAGEVLVSLLLQLSQQSALAYPIAFALNVVWTAFSVFISCLQG
                     YVFIMLVSMYLNKKISSESE"
     gene            25178..25684
                     /gene="atpF"
                     /locus_tag="U1041_000268"
     CDS             25178..25684
                     /gene="atpF"
                     /locus_tag="U1041_000268"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEM4767412.1"
                     /translation="MATTITMQSSTILGNFILVTVSFAVLIILIRVFAWDKITGIFEE
                     RANKIANDIDAAEEKLTAAANLVQQREDELVQGRIESQKIIQDAVERAKLEKKRILEQ
                     AEVEAQALKTKATMEIEAEKREAQENLRVQVAELAVDLASKIILEDLDQQAHSNLIDR
                     YLDKLGDK"
     gene            25685..26218
                     /locus_tag="U1041_000269"
     CDS             25685..26218
                     /locus_tag="U1041_000269"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEM4767413.1"
                     /translation="MNARENAIVQKYALSFVEKVSDHADIWDMYDQISDLISIIHDSK
                     LNRILLSATVSREEKADFVRTVRQSSFWQINDLIEDVIRDGHADLLLETLERVQLQIS
                     KFKNEFEARVVSVYPLTEAQKERLRHLVEQRFSLRVRNITEELDQSLLGGFIVTVNHK
                     VIDASVRTQLKDVRKKL"
     gene            26222..27742
                     /locus_tag="U1041_000270"
     CDS             26222..27742
                     /locus_tag="U1041_000270"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011889023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEM4767414.1"
                     /translation="MESGVLLINAQEISALLKQQIEGFQPDFDYTETGVVTYIGDGIA
                     RAQGLDNAMSGELLVFENGTIGMAQNLETNDVGIIILGQFTDIREGSVVRRTGKIMEV
                     PVGSALIGRVINPLGQPVDGLGEIRTSKTRPIEYPAPGVMQRKSVNEPLQTGLKAIDA
                     LVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLR
                     QYGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYEGKHVLIVYDDLSKQAVAYR
                     ELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAY
                     IATNVISITDGQIFLKDDLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLA
                     SYRELEAFTQFGSDLDAATQAKLNRGRRTVEVLKQPLHKPLPVEKQVLILYALTNGFL
                     DSVPIDDILAFEEELYAYFDLHYDSLLDVIRTTKDLPDTDELNAAIQAFKDQSVFK"
     gene            27754..28632
                     /locus_tag="U1041_000271"
     CDS             27754..28632
                     /locus_tag="U1041_000271"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEM4767415.1"
                     /translation="MAGSLNEIKSKIASTKKTSQITGAMQMVSASKLAKSEQLAQSFQ
                     IYASKVRQITTDLLRGELMASDTSNPMLIRRPVQKSGYIVITSDSGLKGSYNSSILKA
                     VMGMIEQDHDSKEEYEIIAIGSMGADFFRARGINPVFELRGLADNPSFEEVQKIISKS
                     VEMYKNELFDELYVCYNHHVNSLTSQVRVQQMLPVEDLDHNEADGYTSTFELEPNREV
                     ILEQLLTQYAESTIYGAILDAKTAENAAGMTAMQTATDNAKNVINDLTIQYNRARQAA
                     ITQEITEIVAGASALE"
     gene            28652..30058
                     /gene="atpD"
                     /locus_tag="U1041_000272"
     CDS             28652..30058
                     /gene="atpD"
                     /locus_tag="U1041_000272"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEM4767416.1"
                     /translation="MSSGKITQVVGPVVDVAFAAEDKLPEINNALVVYKNDDSKQKVV
                     LEVALELGDGVVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDL
                     EESFPADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVG
                     KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEP
                     PGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP
                     TLATEMGQLQERITSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQ
                     LGIYPAVDPLASSSRALAPQIVGEEHYAVAMEVKRVLQRYQELQDIIAILGMDELSDE
                     EKTLVGRARRIQFFLSQNFNVAEQFTGMPGSYVPVAETVKGFKEILDGKHDHLPEDAF
                     RNVGSIEDVVAKAAKMKF"
     gene            30068..30484
                     /locus_tag="U1041_000273"
     CDS             30068..30484
                     /locus_tag="U1041_000273"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEM4767417.1"
                     /translation="MGQMTVQIVTPDGIKYDHHAAFVLVKTVDGEMGVYSGHEELIAV
                     LEIGEMKVRRVDDENHVDWIAVNGGIIEVNKDIITVISDSAERERDIDISRAERAKLR
                     AERELEEAQTARNIDMEMRATVALQRAINRIRVGKH"
     gene            30544..30768
                     /locus_tag="U1041_000274"
     CDS             30544..30768
                     /locus_tag="U1041_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 domain-containing protein"
                     /protein_id="HEM4767418.1"
                     /translation="MVISILQFFSHILFIYLAHHLLVTTVDWSRWLKVTGDNQRKINL
                     LILFLAIALGYLVSTFFLELLMMGRSFANM"
     gene            30792..32075
                     /gene="murA"
                     /locus_tag="U1041_000275"
     CDS             30792..32075
                     /gene="murA"
                     /locus_tag="U1041_000275"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEM4767419.1"
                     /translation="MDTIIVTGSKNGLKGQVEIEGAKNAVLPLLAATVLASQGQTKLT
                     QVPILSDVYTMNNVVRGLGVRVKFDEETKTIDIDATGKLGSETPYKYVSQMRASIVIL
                     GPILARNGYAKVSMPGGCTIGSRPIDLHLKGLQAMGAKIKQRAGYIEASAENLQGAHI
                     YLDFPSVGATQNLMMAATLAQGTTVLENAAREPEIVDLAIFLNKMGAKVKGAGTETIT
                     ITGVEELTGAEHQVVQDRIEAGTFMVAAAMTGGDVLVKDAVWEHNRPLISKMLEMGVE
                     VTEEAEGIRVRSQVDKLKPVTVKTLPHPGFPTDMQAQFTALMAVAKGESTMIETVFEN
                     RFQHLEEMRRMDLHSEILRDTAIITGGLALQGAQVMSTDLRASAALILAGLVAEGETI
                     VGKLTHLDRGYYRFHEKLAALGATIERVSGEDENG"
     gene            32068..32259
                     /locus_tag="U1041_000276"
     CDS             32068..32259
                     /locus_tag="U1041_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEM4767420.1"
                     /translation="MDKDNLSYVGKNLILVAVVLLIAILVFVLGLMVGYGVIGDGDNV
                     FAVLSPAKWQELIGKFTGK"
     gene            32289..33128
                     /locus_tag="U1041_000277"
     CDS             32289..33128
                     /locus_tag="U1041_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEM4767421.1"
                     /translation="MAKKNVKKQAMSLLSLLATIVVVAGGYLLSDNKSSNVANYSYYV
                     NQSKASESTPSQELASSVLTEDVKKQLGNSIEWNGAGAFIINGNKTDLDASVSSKPYA
                     DNKTKTVQGETVPTVANALLAKSTRQYKSREETGNGSTSWTPPGWHQVQDLDGSYDHA
                     IDRGHLLGYALIGGLKGFDASTSNPKNIAVQTAWSNQARAEDSTGQNYFESQVRKALD
                     KNKRVRYRVTLIYADEDELVPVGSHLEAKAADGSLEFNVFVPNVQSGLSINYHSGEIA
                     VNE"
     gene            33543..34586
                     /gene="pheS"
                     /locus_tag="U1041_000278"
     CDS             33543..34586
                     /gene="pheS"
                     /locus_tag="U1041_000278"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEM4767422.1"
                     /translation="MSNIEQQLAELSQTTLEKLKEIQHQGEKELQDLRVAVLGKKGSL
                     TDLLKGLKDLSNEMKPIVGKQVNEVRDVLTAAFEETAQKVAAAKIQQQLASETIDVTL
                     PGRQVKVGKRHVLTQTSEEIEDIFLGMGFQIVDGFEVEKDYYNFERMNLPKDHPARDM
                     QDTFYITEEILMRTHTSPVQARTMDQHDFSKGALKMISPGRVFRRDTDDATHSHQFHQ
                     IEGLVVGENVSMGDLKGTLEMIIKKMFGEERQIRLRPSYFPFTEPSVEVDVSCFKCGG
                     DGCNVCKKTGWIEILGAGMVHPQVLEMSGIDSTKYSGFAFGLGQERIAMLRYGINDIR
                     GFYQGDVRFSEQF"
     gene            35148..35669
                     /locus_tag="U1041_000279"
     CDS             35148..35669
                     /locus_tag="U1041_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767423.1"
                     /translation="MQIDPIRLEEVSVLQELAKQTFAETFAHDNAPKELEAFFEESYS
                     LEVLTSELSDPNCQHYFLRVDKQIAGYLKLNQGSAQTEQELENAFEIQRIYLLQAFQG
                     RGLGKVLFEFALEKAEQSSCDWVWLGVWEHNYKAQQFYAKYGFEKFGQHEFAVGDKID
                     VDWLLKRPLHQKG"
     gene            35671..38070
                     /locus_tag="U1041_000280"
     CDS             35671..38070
                     /locus_tag="U1041_000280"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEM4767424.1"
                     /translation="MLVSYKWLKELVDFDATSYELSEKMSTTGIEVEGVEQKSAGLSK
                     LVVGQVVSAEPIPDTHLNICQVNVGEEITQIVCGAPNVKAGIKVIVALPGARIAGNYK
                     IKKGKIRGVESLGMLCSLSEIGVSDSVVPKVYADGIYHLPEDAVVGEPVFSYLDLDDE
                     IIELSITPNRADALSMRGVAHEVAAIYDSKVNFKPVALDESDKKASDVIEVAIESDKV
                     TAYTARVIENVTIAPSPQWLQNLLMNAGIRPLNNVVDITNYILLYFGQPMHAFDFDKF
                     DGKKIVARQAKEGENLVTLDGEERDLIADDIVISVANKAVALGGVMGGANTEIDNSSK
                     TVVLEAALFDGKSIRKTSGRLNLRSESSSRFEKGINVATLTEAMDTAAAMIAELAGGQ
                     VLSGIVSAGSVDTSDVPVTATIDYVNRSLGTNLDYAQIADIFRRLGMETTGDASQFTV
                     AVPRRRWDIRIPADLVEEIARIYGYNNLPTTLPKEDGTAGELTLTQNIRRQVRSLAEG
                     AGLTEIISYALTTPEKAVEFAARPTTVTELMWPMTVDRSALRQNMVSGMLETVAYNVA
                     RKNKNLALYEIGKIFEQSGNPKEDLPQEINKFALVLTGLVAEKDFQTPAVPVDFFHAK
                     GILEAIFAHYKLAVDFVATSEIAALHPGRTAEIHLNGAVIGFVGQVHPKTAKDYGIPE
                     TYVAEINLDAIEEALQPAQPFTEISKFPAVSRDIALLLSSDVKHQDVLDAIAGAGVKR
                     LTKVTLFDVYAGSNIEAGKKSMAYNLTFQNPADSLTDEEVAKYMEKISKSLETLGAEI
                     R"
     gene            38124..38390
                     /locus_tag="U1041_000281"
     CDS             38124..38390
                     /locus_tag="U1041_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2087 domain-containing protein"
                     /protein_id="HEM4767425.1"
                     /translation="MNTQDIQEKFFREGKLIVIPKKLKSKQVLFAYLQEELAKKGSAF
                     TEKEVNAFLAEVYDDYAILRRYLVDYGYLSRDQYGLEYRVEEKR"
     gene            complement(38411..38713)
                     /locus_tag="U1041_000282"
     CDS             complement(38411..38713)
                     /locus_tag="U1041_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767426.1"
                     /translation="MYEFVLEYGSFPVKLIDGFVNNRSEIPDFLKEDEEMIARLNQIN
                     ELFHQLFLTIECKFDYIGKQFPDKIEQLRTLYYPLADDLLAKYGNQIELKIEPFIL"
     gene            38904..39647
                     /locus_tag="U1041_000283"
     CDS             38904..39647
                     /locus_tag="U1041_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate polymerase domain-containing
                     protein"
                     /protein_id="HEM4767427.1"
                     /translation="MKTRIVQKQFKRKETKYIVDKETFALLEKDLQKYMVSDEFATST
                     ITNIYFDNEEFDMIQDSIAKKNGREKIRMRVYDSKPSESSQAFLEIKKKENKIGYKYR
                     LTSNPVSVTNYIENGVIDSTIKDDKVTSELEQLRERYGTIKPKMYIYYDRVSYKGIED
                     KKVRLTIDKNLLYRDYDVDAMEGKFGKDLLDPTKVIMEVKVPEERPDWLVALLEKYQI
                     EKQSFSKYGNAYKLAHNITGEEVSKHAVV"
     gene            39634..40311
                     /locus_tag="U1041_000284"
     CDS             39634..40311
                     /locus_tag="U1041_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HEM4767428.1"
                     /translation="MQLFNSIFSTANSSITLTQMAMVFAVSLSMGVLLAAVYKYKSNY
                     TKEFVITLSLMPALIAVIIALVNGNLGAGVAVAGTFSLIKFRSAAGSSKEMLAVLLAM
                     AIGLATGMGFLGLAVFMTVILSACILIFENISFAQVNQNRRHLLVTVPMNFDYDQFFE
                     KQFGAYCKQADLLSLKYKKKKEALILEYQVLLDKKITDKRLVDTVLSAGPLDVVLNKQ
                     MPKKKYL"
     gene            complement(40358..40840)
                     /locus_tag="U1041_000285"
     CDS             complement(40358..40840)
                     /locus_tag="U1041_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HEM4767429.1"
                     /translation="MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKL
                     EPGETPQACAIREVFEETGLTVTKHALKGVITFPDFTPNTDWYTYVFKITGFEGSLID
                     CNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE
                     "
     gene            40997..41560
                     /gene="folE"
                     /locus_tag="U1041_000286"
     CDS             40997..41560
                     /gene="folE"
                     /locus_tag="U1041_000286"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEM4767430.1"
                     /translation="MSKQEQIEQTIYQLLELLGEDPNREGLLDTPKRVAKMYLEMFNG
                     LEEDPKDQFTAVFSEGHEEVVLVKDIPFHSMCEHHLVPFYGIAHVAYIPSKGRVTGLS
                     KLARAVEVASRRPQLQERLTHQVAHALQDALEPEGVFVMVEAEHMCMSMRGIRKPGSK
                     TVTTVALGKYKEDAILRRELLSMIHNK"
     gene            41569..42381
                     /gene="folP"
                     /locus_tag="U1041_000287"
     CDS             41569..42381
                     /gene="folP"
                     /locus_tag="U1041_000287"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEM4767431.1"
                     /translation="MSIEQLAHQVTIMGILNVTPDSFSDGGHYNEVESALVQVEKLLA
                     EGATVIDVGGESTRPGATFVSEEDEIARVVPIIRAIKENYDCLVSIDTYKTGTARAAL
                     EAGANILNDVWAGLYDGDMLALAAEYKVPIILMHNQKDESYADVVGEVKNFLAERAQA
                     ALDAGVSADQIWLDPGFGFSKNVQHNLDLLQGLEQITGLGYPVLFGISRKRVVDYLLG
                     GNSLPTDRDQATAALSAWAVQKGCKMVRVHNVAANRDIVKVWDQLTSGGHHG"
     gene            42374..42736
                     /gene="folB"
                     /locus_tag="U1041_000288"
     CDS             42374..42736
                     /gene="folB"
                     /locus_tag="U1041_000288"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEM4767432.1"
                     /translation="MDKISLNKCRFYGYHGAFKEEQVLGQIFTVDCDLFVDLTAASQT
                     DNLEDTVHYGMVFETIKAVVEGKPYILIEKVAGVICQELFDQFPKVEKIRLAIYKENP
                     PIAGHYDSVGIELERERP"
     gene            42733..43227
                     /gene="folK"
                     /locus_tag="U1041_000289"
     CDS             42733..43227
                     /gene="folK"
                     /locus_tag="U1041_000289"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEM4767433.1"
                     /translation="MKHLAYLSIGGNMGNRQAYLQAALDKLASHPDCRLGLVSPIYET
                     PAWGKTDQADFLNLACQVYTDLSAQDFLSVCQNIEQELDRVRIEKWGQRTIDLDIIFW
                     DEQVIDEENLIVPHPYAHERAFVLLPLADIAADYRHPGLGQRVEVLVSNLGDTSDIKK
                     ISLD"
     gene            43249..44559
                     /locus_tag="U1041_000290"
     CDS             43249..44559
                     /locus_tag="U1041_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEM4767434.1"
                     /translation="MEILAILGVLLAVVAIIYWTTKNLHVIVAAPLASLIIILTNQMN
                     ILEVMLGKEQSYMAGLAGFLINNFAIFMLGSILARYMEASGATQTIANSILKVMGKDS
                     PYKGLLAITLIASILTYGGVSIFVVIFTLLPLSRPLFKELNINWALFPIPVFLGAGTY
                     TMTTLPGAPSIQNVIPTKVLGTSLTAAPIISLAASLTLLVFGLLYMAYCLKKSLANGE
                     TYTEEEDETAVVVADKTPNLFLSVLPLFSLIGTIFLMSKTPNVLAIGLLVSILISALI
                     FYPYLPNQKDILNAATTASIVPAFATSSTVAFGTVLTLSAGFAVIQEWIQQIPGSPLI
                     SLSVSTALVSGIIGSSSGAVGIASSNFLPAYLEMGINPELLHRVVVVASAILTVVPQS
                     GVMITFHNLSKLSMKRGLKYSFILVTVGHLLALLVILLLAPLLY"
     gene            complement(44630..45778)
                     /locus_tag="U1041_000291"
     CDS             complement(44630..45778)
                     /locus_tag="U1041_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEM4767435.1"
                     /translation="MTTSRFQLVGSLLRPANLGEFKRQIEAREDIKYPFYDDFDGYKE
                     TEASLIQKIVAEQKENGLDIVTDGEFGRSMWHLDFLWGFDGIERYIAEHGYPFKDHDG
                     QIFETRKDIGLRITAPLSAKNHHFIDIFKQVKELAGETVTKQTIFGPAHAFNELTIFN
                     GQVGPNQVYKTRDELKAGLIAAYKEFLDQYKEAGGQIVQFDDCLWELFDPANPVPFLP
                     QDDSEALAALADEFVAINNAVIDYGHEIGLTVWTHNCRGNYESRSAAGGTYEAIAEKF
                     LRDQKYDRFFLEWDDERAGDLKALESLRDKNVEVVLGLLSSKTSDLDDEERVYKLLEE
                     ASKIIPKERLYLSHQCGFASCDSGNELAIPQQWAKIKQGQEIAEKFWS"
     gene            45981..47147
                     /locus_tag="U1041_000292"
     CDS             45981..47147
                     /locus_tag="U1041_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4767436.1"
                     /translation="MKKQSPFIIAGIVMLGVVMRAPFTALPAILTDVAAGLGVEVSSL
                     GILTSIPLIMFALCSSLAPRLAAKFGMEKLMGLVLLVMVLGSGMRVLNLPALYIGTML
                     VGATIAFINVLLPSLVAANFPKKIGLYTTIYITLMGVAATVASMIAVPIVSSSSWEFF
                     ILLITGLVFMAFLIWLPNVRNNHRFASENQGNQKSSIWKNKAAIAFLIFGGLQSVLYY
                     TEITWLPTISQSVGFSKAEAGLMAGFFNMTAIPMSMIIPAVLARQTKEMRRNIMLAIS
                     SVTLLGLVMMALIPTNLILWSVLHIILSFSNAALFPYMMLSFTLKTSNSQATAQLSGM
                     VQTGGYLIAAFGPGLLGYSYPIFGNWMPLILALAIVTLAMMWTIVLIEKEDIIL"
     gene            complement(47246..47416)
                     /locus_tag="U1041_000293"
     CDS             complement(47246..47416)
                     /locus_tag="U1041_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003002781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3042 family protein"
                     /protein_id="HEM4767437.1"
                     /translation="MAKGFGKGFLTGVLSTVALAAGAVFTVHKTIIEPEEKKEAFIEE
                     NRKKAARKRVAH"
     gene            47485..48369
                     /gene="miaA"
                     /locus_tag="U1041_000294"
     CDS             47485..48369
                     /gene="miaA"
                     /locus_tag="U1041_000294"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEM4767438.1"
                     /translation="MKTKVIVVIGPTAVGKTALGIELAQRYNGEIISGDSQQVYRKLD
                     IGTAKASPEEQAAAVHYLIDVRDVTEGYSAYEFVAEAKALIADITSRGKLPLIVGGTG
                     LYIQSLLEGYHLGGLVDQEQVLAYRAELDSLSDEVLETMAEQAGLTVEGNSRRRIIRG
                     LELKKFGKNLENTEPEYESLYICLTDDRQVLYDRINQRVDKMMAAGLLDEVSWLYQEH
                     PQAQAAMGIGYKEFFPYFAGELSLEEAIDKVKQNSRRFAKRQLTWFRNRMQVPFYSVG
                     DPDYKSQIFTAVEEFLDD"
     gene            48362..49612
                     /gene="hflX"
                     /locus_tag="U1041_000295"
     CDS             48362..49612
                     /gene="hflX"
                     /locus_tag="U1041_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEM4767439.1"
                     /translation="MIETQKEQERALLVGVELQQTDNFDMSMEELASLAKTAGALVKR
                     VYTQKREKYDSKTFVGSGKLEEIAQMVEADEIDTVIVNNRLTPRQNVNLEEILGVKVI
                     DRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ
                     LELNRRSIRNQIHDIERQLKTVEKNRATVRERRLQSGVFKIGLIGYTNAGKSTIMNAM
                     TDKRQYEADELFATLDATTKQINLADKFNVTLTDTVGFIQDLPTELISAFKSTLEESM
                     NVDLLLHVIDASDPNHSEQEQVVLDILKDLDMLDIPRLALYNKLDKTDDSFTPSQFPH
                     VMLSAKDENAKGHIQMMVLAKIKTMFERFEVRVPLAESYKLHDLATLALIENRTYEED
                     VEVVSGYIASSNKWKLEEFYDGLS"
     gene            49596..50225
                     /locus_tag="U1041_000296"
     CDS             49596..50225
                     /locus_tag="U1041_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEM4767440.1"
                     /translation="MTDYLDLAIKYGGFTSLDKVYLAKKLADLTDQQKLDFITPPPSV
                     INAYFAEIYQKQGAEEATAYYLTLSQQLSLFPKEPSFEEDKPFVRLNLSGKSFGFAYV
                     SADGLAQVFSEGAEEVTDSLLFEIAQVFPHYVVFVEEGKIFMKANPFKDAELKEVETD
                     YLLTKVETTEGLVKISGFNQEEVLEAAEGFSGQYYYVWSGRSAILYIKH"
     gene            50236..51165
                     /locus_tag="U1041_000297"
     CDS             50236..51165
                     /locus_tag="U1041_000297"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HEM4767441.1"
                     /translation="MQIQFLGTGAGQPSKARNVSSLALKLLDEINQVWLFDCGEGTQN
                     QILETAIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSEEQTDIDIYGPVGIRSFV
                     LASLKVSGTRLPYRIHFHEFDVDTVGQVLETDKFTVFAEKLDHTIPCVGYRVIQKDLE
                     GTLDAEALRAAGVPFGPLFGKIKNGQNVTLEDGTEIIASDYISPPRPGKVVTILGDTR
                     KCHASVRLAVNADVLVHEATYGKGDEKIARKHGHSTNMEAAQVAKDAGAKQLLLNHIS
                     PRFLSKDISQLRKDASTIFEQVHIVKDLEEIEL"
     gene            51162..51917
                     /locus_tag="U1041_000298"
     CDS             51162..51917
                     /locus_tag="U1041_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM4767442.1"
                     /translation="MRTILITGASGGLVQEMVPLLKDDFLILLGRDVAKIEQLYAYHE
                     KKAVFDVDIRDEIALTAFFDELDSQFGQIDILVNNAGYAIYDDFENFSSQQVQAMFDI
                     NTFALMTICRLVGKRMKARRSGQMINIISMSGLIASSKSSVYSATKFAAMGFSNTIRL
                     ELAPYGVTVTTVNPGPIATSFFDQADPDGTYQESVKAFLLQPDYVAKKIVSAMGTKKR
                     DINLPWSLAAAHKLYTLFPRLADYLASTVFNLK"
     gene            52061..>52916
                     /locus_tag="U1041_000299"
     CDS             52061..>52916
                     /locus_tag="U1041_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEM4767443.1"
                     /translation="MNYSKENKQEHQHMMHSEEVGQTSHHSHQQEHPHEEGVHANHHS
                     DHHVHHHVGGSDVSHHSHHTHDAHQHHQGHDHDMMEHGGHMMHMGDMNTKLKVAVAVM
                     IPLLAISPIAGFTLLRFPGVELVQLILGSIIFFYSGTPFFNGARGELQAKKPAMMTLI
                     SMGIIVSYLYSVYATILALLGQESMNFWFELSTLIVIMLIGHIIEMKAVMGAGDALKD
                     LASLIPKKAHLKDGTDVAVEDLQIGDFLLVKENEKIPADGKILSVAHIDESMITGESR
                     AVKKEAGDR"
BASE COUNT        15205 a        10053 c        12542 g        15116 t
ORIGIN      
        1 ttatgacgga aacatgaaag aaaggtaaaa aaatcttgaa aatgatttca aaaagtggta
       61 taatgtcttt tgtaagggtt atcacaaata actcacaatt ttgtaaaaat aaaggagaat
      121 ccaaatatgg cttcaaaaga tttccacatt gtggcagaaa caggtattca cgcacgtcca
      181 gcaactttgc ttgttcaaac tgctagcaaa ttcgcttcag acatcacttt gaactacaaa
      241 gataaatcag ttaaccttaa atctatcatg ggtgttatga gtcttggtgt tggtcaaggt
      301 gctgacgtaa caatctctgc tgaaggtgct gatgctgacg acgcaatcgc agctatcact
      361 gaaacaatgg aaaaagaagg attggcataa gaatatgaca gaaatgctta aaggaatcgc
      421 agcatcagat ggtgttgctg ttgctaaggc atatctactc gttcagccag atttgtcctt
      481 cgaaactgtt acagttgaag atacaaatgc agaagaagct cgtttggatg cagctcttgc
      541 agcatctcaa aacgagcttt ctcttattcg tgagaacgca gtagctagcc taggtgaaga
      601 ggccgcagcc gtatttgagg cacacttgat ggttcttgct gacccagaaa tgattggtca
      661 aattaaggaa actattcgtg ctaagaaaac aaacgctgag actggtttga aagaagtaac
      721 ggatatgttc atcgctattt ttgaaggtat ggaagataac ccatacatgc aagagcgtgc
      781 agcagatatc cgcgacgttg caaaacgtgt cctagctcac ttgcttggcg ttcgtttgcc
      841 aaaccctgcg acaattgatg aagagtcaat cgttatcgca catgacttga caccttcaga
      901 tacagcacaa ttgaacaaac agtttgtaaa agcctttgta acaaacatcg gtggtcgtac
      961 aagccactca gctatcatgg ctcgtacact tgaaattgct gctgttttgg ggacaaataa
     1021 cattactgaa atcgttaaag acggcgatgt attggctgtt aacggtatca caggtgatgt
     1081 gattatcaac ccaactgaag aacaaattgc agaatttaaa gcggctggtg aagcttatgc
     1141 aaaacaaaaa gctgagtggg cacttttgaa agatgctcaa acagtaacag ctgacggcaa
     1201 acactttgaa ttggcagcaa acatcggtac accaaaagac gttgaaggtg taaatgataa
     1261 cggtgctgag gcagttggtc tttaccgtac agagttcttg tacatggact cacaagactt
     1321 cccaactgaa gatgagcaat acgaagctta taaggctgtt cttgaaggta tgaacggtaa
     1381 gccagtcgtg gttcgtacaa tggatatcgg tggtgataag gaacttcctt acttcgacct
     1441 tccacatgaa atgaacccat tccttggatt ccgtgcactt cgtatctcaa tctctgagac
     1501 tggtaaccaa atgttccgta ctcagttgcg tgctcttctt cgttcatcag tacatggtaa
     1561 acttcgtatc atgttcccaa tggttgcctt gttgactgaa ttccgtgcag caaaagcaat
     1621 ccttgaagaa gaaaaagcca acttgttggc agaaggtgta gcagttgcgg atgatatcca
     1681 agtgggtatc atgattgaaa tccctgcagc agcaatgctt gcagaccaat ttgccaaaga
     1741 agttgacttc ttctcaatcg gtacaaacga ccttatccag tacacaatgg ctgctgaccg
     1801 tatgaacgaa caagtttcat acctctacca accatataac ccatcaatcc ttcgcttgat
     1861 caacaatgtt atcaaggctg cacacgcaga aggtaaatgg gctggtatgt gtggtgagat
     1921 ggctggtgat caacaagctg ttccacttct tgtcggaatg ggcttggatg agttctctat
     1981 gagtgcaaca tctgtacttc gtacacgtag ccttatgaag aaacttgata cagctaagat
     2041 ggaagaatat gctcaccgtg ccttgacaga atgtgcaacg gcagaagaag ttcttgaact
     2101 tcaaaaagag tatgttgatt tcgattaata agaaatttaa agtttggagt agataaacta
     2161 ctttaaactt tttttgtatg ctccagcgtt gagtactata tatttttgag atatacggct
     2221 taaaatactt tgaagattga aattaatttg aaagaaaatt tgaaattttc aaaaaattat
     2281 tgctaaacca ggttcaatat gttacaataa tcacattata ctcaaaggag gaaaaaatga
     2341 aggcgtataa taattatatt aacggttctt gggttggatc agaaaaatca atcgcgattc
     2401 actcaccgat taatcaagaa aaacttggta cagtacctgc tatgtcaaaa gaagaagttg
     2461 ataaggcgat ggatgccgct agaaaggcat tgcccgcttg gcgtgccctt tcagcatttg
     2521 aacgtgctca atatttgcat aaggcagcaa atattttgga agaacgtaaa gatgcaatcg
     2581 gtgaaatttt agctaaagaa gtttcgaaag ggatcaaggc ttccatcgga gaagtggatc
     2641 gttctgccca cctcattcgt tttgctgctg aagaaggctt gcgtgtttat ggttcatcat
     2701 tagagggtgg aacctacgag ccaactgcta agtcaaaggt ttccttggtt cgtcgtgaac
     2761 cggtaggtat cgtattggcg attgcaccgt ataactaccc tgttaactta tcggcatcaa
     2821 aaattgcacc tgctttaatt ggtggcaacg tagttatgtt taaaccacct acacagggtt
     2881 caatttcagg tctattgttg gctgaagcct ttgcagatgc tggtatccca gcgggtgtct
     2941 ttaatactat tactggtcgt ggttcagaaa ttggtgacta catcattgaa catccagaag
     3001 taaacttcat caactttaca ggttccactc caattggaca aaaagttggt aaattagcag
     3061 gtattcgtcc aatcatgctt gaattgggtg gtaaggatgc agcagttgtt atggaagatg
     3121 cggatttgga ccacactgca aaagaaattg taagtggtgc ctacagctat tcaggtcaac
     3181 gttgtacggc tattaagcgt gtccttgtta tggattctgt agctgatgaa ttggctgcga
     3241 agttgaaagc agaagttgag aaattgactg tcggtgatcc atttgagaac aaggacatta
     3301 cgccagttat tgacgaacaa tcagcagaat ttattgaagg tctggttaga gatgctcagg
     3361 caaaaggtgc aactgaattg acaccataca aacgtgagaa aaacttgatt tggccaaccc
     3421 ttcttgacca tgttacacca gatatggaaa ttgcttggga agaaccgttt ggaccagttc
     3481 ttccaattat tcgtgtttca tcattggatg aaatgttgga attgtgtaac caatctgagt
     3541 atggtcttca atcctctatc tttacaagca actatccatt tgcttttgat tttgcttcta
     3601 aattagaagt tggtacggtt catatcaatg ctaagacgca acgtggtcca gataacttcc
     3661 cgttcttggg tgtcaagggt tcaggagcag gtgttcaagg tatccgttac agtatcgaag
     3721 cgatgactaa agtgaagtca gtggtatttg acgttcaata aaataataag ggagtgggac
     3781 aaaaatcggt aacccgcagg gttcgatgag tcgttagcct accccctaat tagagcccac
     3841 tcaaccgctg cgtcaagttt aactattgaa aaaaactaag gaggccggga cttttgtccc
     3901 agcctctttt tcttacatac aggcaaccat tcattcacga aaaaagttcc aacctcaaaa
     3961 tgagattaga acaggatttg ttatttagct tgataaaact tattgtgttg gtagataggg
     4021 tcaaaggtaa gattgatacc taatttacga aggacactct tgtcttcatc ggataggata
     4081 acggttgagt gggcttcgct accatttaat tggcctaact ctttcatggc acgtgcagca
     4141 agagggctat cttgtgcagt aatggcaagg gcgttaagaa tctcacttgc atcaagtcgt
     4201 gtattggtct tatccagata atctgccttc aattcttgga ttgggcggat gtagtttggt
     4261 tcgatgagaa gtatttcatc atcgatgtta gcaatttgct tgatggcatt caggagaaca
     4321 gttgcagttg gcttgaggag gtcggatgtc ttacctgtta caatctctcc agttggcaac
     4381 tgaatagcaa gggcagggct agttgtcagc tctgcttttt cgcgcgcagc gataaccacc
     4441 ttacgatctg ctggtgtcac accgacttca ttcatgagga gttcaatctt tttaactgct
     4501 tgctcgctca ctcgctctgc cttgaaatca acgagtgtct gatagtagcg acggatgatt
     4561 tcttgcttgg atgcttcgat cgcagcctct tcgtccacga tggaatagcc caccatgtta
     4621 acgcccatgt ctgtcggtga ggcgtatggt gatttgttca aaatacgttc aaaggtacgg
     4681 ttgaggacag ggaagacctc gatgtcacgg ttgtagttga ccgcagtttt gccgtaagtt
     4741 tgcaggtgga aggggtcgat catgttgagg tcgtctaggt cggcagttgc tgcttcatag
     4801 gccaagttaa cgggatggtg gagtggtaag ttccaaactg ggaaggtttc aaacttggca
     4861 tagcctgatg ttacgccatg cagttggtcg tggtaaagtt gggagataca ggtcgccaat
     4921 ttacctgaac caggtccagg tgcggtgaca acgacgaggt tgcgactagt ttcaatgtag
     4981 tcatttttgc ccataccttc tggtgagatg atgtggtcaa tatcagaagg atagcccttg
     5041 attgggtagt ggagatagga cttgatacca tgtttttcca actgtttgcg gaaggcgtct
     5101 gcggctggtt ggttgcggta ttgggtaatg accacagaac caacataaat atcaatatca
     5161 ttgaaggtgt caatcaagcg gaagacttct tggtcgtaag aaatgcctag gtcgccgcgt
     5221 gccttggaat gctcgatatt gctggcattg atggcgatga caatttctac ttggtctttt
     5281 aattcttgga ggagtttgat tttgttatct ggttcatagc caggtaaaac acgggctgcg
     5341 tggaaatctt ccagcatttt tccaccaaat tccatgtaga gtttgccttc gaactgggca
     5401 atacgctcta aaatgtggtc acgttgcaaa ttcaagtatt tagttgaatc aaatgcgatt
     5461 ttcttcatta taaatatgtc ctccaaatgt gtattaatct ctgggaaaac aaaaaatagc
     5521 tccctaaaac tagggagcct tttctccgac ctctcaaaag aggtgcccga acaatactat
     5581 aacaaactgt gctaatcttg tcaagaaaaa gtcagataga agaaaaatta aacaagtgtt
     5641 taaaaaatat ttaattttta taaaattaaa tattgacttt attaaaataa agtgtaaaat
     5701 aagattaaac aaatatttaa ttttattaaa aggagtttct tatgaaaaaa ctagtcaaca
     5761 ataaattgtt cctgtccagc tttgtagcgg acttgatttc caactttggc gatacgcttt
     5821 actatctagc cctgatgaac tatgtattgc ttctaccaga taccaaattt gctctgggca
     5881 tgattaccgc ttctgaaacc ttgccgattt tggcaggcct cttcatcgga atctgggcag
     5941 ataagaccaa aaacaaattg gataccatcc tagcgaccct actggttcgt gttggtttgt
     6001 ataccttggt tggtttcctc atgggattta ccccagccct gtgggttgtg gcagtggtct
     6061 gcgtcatcaa cttcctgtct gaccttgctg gtcaatacga aaacggtctc tatatgccag
     6121 tcagcttgcg ggttgtggct gctgaagacc gtgaaacagc tatggctttt aaaatgactg
     6181 ttaaaaatct cttgcagatc gcctttcaag ccagtggtgc catcctgatc ggatttatgt
     6241 cctatcaaaa cctagccttc ttcaacgctg ggaccttctt ggtcagtctt gcgattatgg
     6301 caggtttgcg tccagctttt gccaagttgt tgaaagagag tcctatccaa gaagttgaac
     6361 aaaccgaaac agaagcagga cttatcaagg gaattggtca gagtatcaaa gattcctacc
     6421 aagccgtgca gaatattcct gttcttaaag cgtcaatcat taccattgca agcttgaatg
     6481 cgatttttac tgccctctca ccattagcaa ttcttaatat gaaggagttt tcagactttg
     6541 tgattgtcaa tgcggggaca accgttgctt tgatttccat tctattctca gttggtagta
     6601 tcttggggtc aagtatcggt atggctcttt tcaaaaatgt tagcttggtc aacctcctca
     6661 agttttctac tcttatgcct gttttacttt tctcaggttt ctttcttcac aatatttatg
     6721 tggtgctggc agtgatcttc gtaacggcag tgacactggg aattttcaac ccgaaaatga
     6781 gtgctctggt tatgaatgaa ctgccagagg ataaattggc aactgtcggt ggagggattg
     6841 atgctttctg ccagattggt atggtagcag gtcaagctct ggttgccatt atggtgacgg
     6901 tgctttctgc gacaagtatt tccctcatct tcctcttgct ttctgtggga ctagtaagct
     6961 atactattct tgtggggcgt aggcctaaaa atgaagtagt tgttaaagct tagaaagtat
     7021 acgtatgaaa ttagattacc gagattatag aagcgagatt gttgaaaagt tctttattcc
     7081 cttgattgtc aaggagcgtg aggagccgtt tgaggcggat ttttcacaga aagaaaaaga
     7141 tattctcaaa gatgccttgg acattcgtga tgagatggaa gaaaagttgg cagattttcg
     7201 tcaggaagtc aatcaagtct ttgtctgggg acatattttt aacattttgc atagtcttta
     7261 tttttatctc ttgaatgatg ggcaggatcc aaagacagtt gaggaagctt gtcaattgat
     7321 tttaaagctg tctcaagcag aagtagaaga tgccatgcga accatgttgg cgtctgaaaa
     7381 tgatggacat cgtgagaaga ccctcagcct catggaactc ttggaaaaaa cggataaaaa
     7441 gccggcagat aagtggtact ggtcactggc tattcgcaat cctttagaaa cagttcagcg
     7501 atctgtccat ctcttggata agatgctgcc aatctatcag ccttattttg agctggcaag
     7561 ggcggagcgt gaaaaatttg ctcgtgaatt tgacattgaa aaactctatc aagagtccaa
     7621 gcggttgtcc atgactagct tggatgcttt gagtgttgaa aatgctcaat tcttcgttct
     7681 cagtccgtgg aattattggt ttgcttatta tggcaatgaa caatttgact atatgaaagt
     7741 cgctctttta gcgtcctgtc gaattgatca gattatgctg tcaaatgacg agctggatct
     7801 ggatgatttg acaacggctc ttaaagtcat cagcgatagc acgcgctatc aggtcttggt
     7861 ggagctgacc aagcctcatg ccaagagcaa ggacattgca gaacgcctgg ctattacagg
     7921 ggcggcagtg tcattccaca cccaaaagct gattaacggc gacctgcttc tctttaatgc
     7981 taaagacaag aatgtcaaat acagtgtcaa tcgcgacctg atccaacagg tgattgataa
     8041 gttgaaagag gattttgatt tgtaaaaaag ccttgtaagt taagtcttac aaggttcttt
     8101 tgtgcttata ctcttcgaaa atcaaaatca gacgtttgat gagtgaaaag gtccagtgga
     8161 tcttttcagc ctgttccctt gaaatataat aaggaacagt gttctatctg catcttacgg
     8221 tcacgaacca agttcgtcta atttccgacc tccaacagtc tattcccaga ctgttggagc
     8281 tagtctgttt ttgattttct ttgagtatta atgattaacc agctgagcag ttggcaagtg
     8341 atgatggtga taaagaaaac cagccaacct tgctgtattt tggtcaggga actagtttct
     8401 aggaagaaaa agctgatttc cactgggata acatggataa aataataata gctggcgtat
     8461 cctttgagaa attggaattt tttctggcgg aagaggtctg tggttagggt ccaggcgact
     8521 agataggctg tgaatggaat caggctaaat agaaagttct tgtcgtagcc ctgattgaga
     8581 tagatgatag tggcttcaaa ggctaaaagg gctgtgcaga caagtagttt ggttttttgt
     8641 cggtattgga aaatgggttg attgagtttg tcggctagat aaaagcctgt caggacaaaa
     8701 atcggtgcgt agaagaggcc gttgcggctg gtgaaaaaga aggttttgta gctgtcaaat
     8761 gcggtcagga aaatcgattc tgtcaggtag gaggagtagg tttcgactga gcctaggaga
     8821 tagagaaggc aggctagata agctgtgatg cgccagcccc atttctccaa ggaaaaatgg
     8881 acgaggacaa gtcctagcaa gaaggcgggc atgtaccaga gttggtagct ggtgccggtg
     8941 taggtcagtc cgactaggag tgcgagggga tagtagggga gggggatttc ttggagtgtt
     9001 aggtagaaga ggtagaaggg caggtagagg gcggaccagg tcaagtattg tttgctgtag
     9061 cggattaggt attgtttgga gaggctgggg tagttgcgtc tgaggaagaa gctggctgtg
     9121 accatgaagt agggaacgac catgcggcta aagattgatt tttggatgaa gtggagcggg
     9181 tctgcttcaa ataacctgcg gcaatggagg gcgataacga gaatggctcc gatgaactgg
     9241 atgagggaga gtagtgatgt attgagtggt tttgtcttat tttgcatgct aacgtttttc
     9301 tttttttctt ccattttatc gaaatctgat gaatatgtaa atgtttgcaa aaagatgtgg
     9361 agaggtgctg gctgaaactt agttgacaag agaagtccag tggaaaatat ggtataatgt
     9421 taggacggag taaatgtaaa ccatctattt cgtttaagtt agaaaggagc atatagatga
     9481 aagatttacg tgcaaaatta ttggctgatt ttgggattga tttttcggat ttgaatttat
     9541 tagaaacggc ttttacccat acttcttatg ccaatgagca tcgccttcta aaaatttcac
     9601 ataatgagcg cttggaattt ttaggagacg ctgttctcca gttgatgatt tccaaatatc
     9661 tctatcaaaa atatcctgat agccccgaag gtgagatgtc caagttgcgt tcgacctttg
     9721 tacgtgagga gtctttggct ggtttttcac gtgcttgtgg ttttgatcgg tttcttcgtc
     9781 ttggtaaggg ggaagagaag tctggagggc gaaatcgcga tactatttta ggagatgctt
     9841 tcgaggcgtt cttaggagct ctgctattgg acaaagggga aaagaccgtg gaggaattta
     9901 tccataaggt catgattcct cgtttagaaa aagggaattt tgagcgcgtg accgactata
     9961 agactgcttt gcaggaaatt ttgcaggtca atggtgagat tgctatttcg tatcaagtaa
    10021 tagctgagtc tggacctgcc catgataaga cctttgaagt ggaggtatct gctgatcagc
    10081 gtgtgattgg tcgtggtcgt ggtcgctcta agaaattagc tgaacaagcc gccgccaaaa
    10141 atgctgtgga ggctagagga taggtatgta tctaaaatca attgaaatgc agggctttaa
    10201 gtcttttgcg gataagacta aggtagtctt tgatcgtgga gtgactgctg ttgtagggcc
    10261 gaatggttcg ggcaagtcca atattacaga aagtctacgt tgggccttgg gagagtcgtc
    10321 tgctaaaagc ctacgtggag gcaagatgcc agacgtcatc ttttcgggaa cagaaagccg
    10381 caaggctctt aactatgcct cggttgtcgt gaccttggat aatagcacag gttttatcgc
    10441 caataaacag aaagaaatca aggtagaacg ccacatttat cgatctggtg atagtgagta
    10501 cttgattgat gggcaaaagg ttcgtctacg ggatattcat gatcttttca tggatacggg
    10561 cttgggacgt gattctttct ctatcatttc acaagggcgg gttgaagcaa ttttcaattc
    10621 caagcctgag gaacgccgtg ctatttttga agaggcggca ggggtcttaa aatacaagac
    10681 gcgtaaaaaa gaaacagaaa gtaagttggc acaggcccag ggcaacttgg accgcttgga
    10741 tgatattatc tatgaattgg ataatcaggt caaaccatta gagaaacagg cacaaactgc
    10801 taagaaattt ctagaattag atggtcaacg taaggaatta tacttagatg ttttggtggc
    10861 tcagttgtcg cttggtaagg aaaagttatc ggaaaaagaa tccgaattag agtctgtcaa
    10921 aactgaattg acaagctact accaacagcg gtcagaattg gagcaagaaa atcagaactt
    10981 gaaagagaag cgccaccgcc tttcagaaca attggagcgt gaacaggcag ttctgttgga
    11041 tttgaccaag ttaatcagtg atttggagcg aaaaattgag gtccataaac tggaatctag
    11101 tcaaaacgaa tcaagtcgtc aagaagcgca ggcgcgtttg gaaaacttgt tgactagacg
    11161 agagcagttg gcagaacaga ttgagcaaaa gcaagaaatg cttacgcaat tagatagttc
    11221 cttatctagc ttgaaagacg atattgctac ggtagacaaa gaaatttcct acttttcaga
    11281 agatcctgat caagttttag atcatctgcg tgaacagtat gttgctctga tgcaggaaga
    11341 ggcagaagct tcaaaccgtc tgaccaagat tcagcaggat attgccaatc aaatcagtct
    11401 ttctgagagt aaatctgaag acttggcacg cttgcagacg gaaaaacaaa cagctcaaga
    11461 agtacttgat aagagtcgga aaagtttaga agaagctgat cacgtgttac gccagttact
    11521 tgagagctat cagaccaaaa aaacagaatt ggatcaagtc cagactgctt atcaggctga
    11581 gcaaggtcgc ttgtttgatt tgctggatca gttgaaaggc aagcaggctc gccagtctag
    11641 tttagaagct attttaaaaa atcattccaa tttctacgca ggggttaagg ctgtcttaca
    11701 ggcggcgcca agcttaggag gaattattgg agcagtcagt gaacaattga cctttgatac
    11761 tcgttaccaa acggctttgg aaattgctct tggcggtgct agtcaaaacg tcatcgttga
    11821 agatgaagcg actgctaaac gagctatcgc atttttgaaa gaaaaacggc aaggacgggc
    11881 aaccttctta cctctaacaa ctatcaagcc gcgtcagctt tctggacagc aagtctcttt
    11941 actagaatct tcagaaggat tcttggggct tgcaagtgat ttggtgactt atcagccaaa
    12001 tttagatgcg attttccaaa atttgctagg tactatcgcg atttttgata ccattgacca
    12061 tgccaatcag gcggcgcggg caaccaagtt tcaagtgcgt atggtgacca tggatggagc
    12121 ggaaatccgt cctggtggag cctttgctgg tggtagcaat cgaaataaca gcacgacctt
    12181 tatcaaacca gaactggatg ctcttttagg agaaatagca gagctgtcta gccagttgca
    12241 ggagcaagaa agcttggttg cagctaagaa aactagctta gaccaaacca gagaaacctt
    12301 ggaaacgatt aaggcggagg gggaagaagc tagattgaac cagcagagcg caaggattca
    12361 tcaggaacag gcagaaaata gactggctca gctatcagcc cagtatgacc tgcaaatgag
    12421 tcaggttagt ccgaccattt tgactgagct agaagaggct gctgctaagg aagaagtaaa
    12481 tgtccaagcc ttgaatgaga aaaaactagc cttggaccaa caaatcaatc aagtccgtga
    12541 taatcgcgac agcattcaag aaagcttgca gaaactacag actcagaagg gtcaactaac
    12601 tttggaacag gctgaactaa ctagccaact tcgttttgaa cagacagatc tgagacgttt
    12661 gcaagaagaa aaagtggttg cagataagga aatttctctt ttagaggata tgattgacca
    12721 gaagttagaa gctcttgaag atactagtat tgagattctt gaagaacaat tgcaggcggc
    12781 atctgataag caaaaccaga ccaatcagat tctaattcgc ttaaagtttg aattggaaga
    12841 tattgatggg cagtttgaag acttggaaga aagattgcaa caagctcgga ctaagaatga
    12901 tgatttgatc cgtaagcagg ctaagttaga ggcggattgt gagcaagcgg gcgataaatt
    12961 acggactcta cttggtaatt tgaccgagca tttcaaattg agttttgaag ctgcccagtc
    13021 tcaggccaag gaagttgaga atcttgcagt tgctgaacaa agcctcaaag acctagaaag
    13081 agctattcgt gctttgggtc cagtcaattt ggatgctatt gagcagtatg acgaggttaa
    13141 taatcgcctt accttcctca atgaacaacg gacagatatt ttgtcggcgc gtgatttact
    13201 actagatact atccacgaga tggatgatga ggtcaaagag cgcttcaagg ttacttttga
    13261 agctattcgt gaaagcttta agcagacatt caaacaaatg tttggcggtg gctcagcgga
    13321 tttgattttg acagaaggtg acctattgac tgcgggtgtg gagatttcag ttcaacctcc
    13381 gggtaagaaa attcaatctc tcaatcttat gtcaggtggc gaaaaagccc tttcggccct
    13441 cgctctgcta ttttccatta tccgtgttaa gaccattcct tttgtaattc tcgatgaggt
    13501 ggaggcagcc ttggatgagg ccaatgtcaa acgttttggc gactacctca accgttttga
    13561 taaggagagt cagtttatcg tcgtgaccca ccgtaaaggg accatggcgg cagcggatgc
    13621 catgtatggg gtgaccatgc aggaatctgg tgtgtccaag attgtttccg ttaagctgaa
    13681 agatgtggag aaattatgat taacaaaatt tacgccagtg atatggatgg taccttttta
    13741 ctagaagacc atagttttga taaggaacgg tttcgtcgta tactgaatca gttcaaagaa
    13801 aaaggttatt tatttgtggc agcaagtggg cgatctatgc aaagcctgaa acttgttttt
    13861 gaagattttg tagatgaaat cggttttgtg gcagaaaatg gttcaatcgt tgaatatcag
    13921 gggcagacta tctttatgga tgatccaatt agtcctgaaa tctatctgcc gattatcgcg
    13981 ggtattgatg caggtccctt tggtagcagt cagtccatgg tgctgtctgg cctcgaaaac
    14041 ttttatttat taaaaaatgc tgagcctcag tttttagaag cgatgacgaa ttattacgca
    14101 cattttcgat tggtagacac atttgaagaa gttcgagaag agattataaa aatcaatgcc
    14161 aaattttctc ctgaggaaat ggacgatgcc agacgatggt taaatgatac atttgaaggc
    14221 gtaacggcca tgacaacggg ttttgacaat attgatataa ttccaaatgg ttcaaataaa
    14281 tcagttggat tgagccatct ctgtgctcat tttggaatta ccagtcagga tgtagtggca
    14341 tttggtgata atcaaaatga tttagatatg tttgactttg caggtctggc tcttgcgaca
    14401 gaaaatgcaa gagaggacgt gaaggccaag gcagattcta ttattggtca ttgcaatgat
    14461 ggagcagtat tagcctattt agaggaggaa gtaaatggca attaagttga ttgcattgga
    14521 tttagatgga acacttctga catcggacaa acggatttca gaagcaaata aaaaggcctt
    14581 gcaagcagcg cgtgagcgtg gagtttatgt agttctgaca acagggcgtc ctttacaagc
    14641 tatcggtact tttctagaag aactagatct gctaggggag aatcaatatt cgattacatt
    14701 taacggtggt ctagtccagg aaaatacagg tcgggttttg gataaggttg gcttcaccat
    14761 tgaagatgtg cgcaccatcc gtcgtgtgac aaatgacttg gacctgcctc tggatgttct
    14821 ctatggtggt gatgtctatt ctctaccatc agcccatgaa tcactttatc taacttgtaa
    14881 tccattgctt aataaaattg tggcaagcga tgaggaaatg ccagaagatt ttgtctacaa
    14941 taaggcagtt tcagcagtag atgcggcttt tctggatgct caaattccaa aaattcctgc
    15001 ggaacttcac gagcgcttcg agattttcaa gtcgcgtgat attctactcg agtggagtcc
    15061 aaaaggtgtt cataaggcaa atggtttggc taagttgatt ggacatctgg ggattgatca
    15121 gtcagaagtt atggcctgtg gcgatgaagg aaacgatctt tcgatgattg aatgggctgg
    15181 tctgggtgtt gccatggcta atgcgactga tgaaatcaag tctgcggcca accttgtcct
    15241 gccaaaaacc aatgatgaag atggtattgc ttgggccatc gagcactatg tattgaatga
    15301 ggactagtat gggattattt gatcgattat ttggacaaga aaaacaagag gagcaagttg
    15361 ctctggttga agacgtagaa acggagcagt cggcttctag cgaagataca gtaactactg
    15421 aagttgagtc agctactcaa gaaatggaag agttccagtc tgaagtagca gagcctgaat
    15481 tgacagccga acaagaagct cagaaacaac gaaccttaga catgatggct caatattatg
    15541 tagccaaaga agccgctgcg gctcgagtga aggaagcgca ggaacaaggc tttgaccctg
    15601 ctattcaaac caaggtcaag gaagagcctg ttgaggaagt tgctccagta gagcaagaaa
    15661 gtgagcagga caagtaccag cggaccttga aaaagacgcg tacaggattt ggggcaaggc
    15721 tcaatgaatt ctttgccaat ttccgttcgg tagacgaaga atttttcgaa gagttggaag
    15781 aaatgctgat tttgtcagac gtaggtgtgc aagttgcttc tacgctgaca gaggagctcc
    15841 gctatgaagc caagctacaa aatgccaaga agacagatga actccgtcgg gttatcatcg
    15901 aaaaattggt ggatatttac gaaaaagatg gtcaattcag cgagcaaatc aatttccaag
    15961 atgatttgac agtcatgctc tttgtcggtg tcaacggtgt tgggaagacg acgtctatcg
    16021 gtaagttagc ctacaagtac aagcaggctg gcaagaaggt catgttggtc gcagcggaca
    16081 ccttccgtgc gggtgcggta gcccagctgg tcgagtgggg tcgtcgtgtc gatgtgccag
    16141 tggtcacagg acctgaaaag tcagacccag ccagtgtggt ttttgatggg gtaaaacgtg
    16201 ccgtggcaga aggcgtggat attctcatga ttgacacagc aggtcgtttg caaaataaag
    16261 ataaccttat ggcagagctg gaaaaaatcg gtcgtatcat taaacgaaca cttcctgatg
    16321 caccgcatga aaccctctta gcactagatg cctcgacagg acaaaacgcc cttagtcaag
    16381 ccaaagaatt tgcaaaaatt actcccttaa caggcttagt cttgaccaag ctagacggta
    16441 ctgcaaaggg tggtgtcgtt cttgctatcc gtcaggaact ggatattcca gttaagctaa
    16501 ttggtttcgg tgagaaaatc gatgacatcg gtgaattcaa atccgaagag ttcatgcgtg
    16561 ggcttttgga aggattggta tagaatgaaa aaagtagtta actgtgacag ttagctactt
    16621 ttttgttttc attttttccg caataaagct tctatccagt cgggtgcgta ggcagaagtg
    16681 cagccttttg gaactttcat gtccgcatag acagccaatt cctgaccgat tgcaaggcct
    16741 tgttccagat agttgggata ggcaaccgca atctccacca agcattggtt catggtccat
    16801 tggataagcg ggtctgcggt ttgtaaatgc tggcgaatat ggtctagagt ttcttcaatt
    16861 tcttggtttg ttgctgtttt tccagcaaag tatttggcac ggaggaacca gccaatgcgt
    16921 tgaaaaatgg ctggtttttg ggcaagcaag gtttcttccc aatccctact gtcttttcgt
    16981 ttactgagaa tgatagaagc cagtttatcg agaacattga ctgaaacctg ttcatcgagg
    17041 cagttttcta aatcagctag ggccagctgg tctggcttgg tttttgccag ttgaatagcc
    17101 agatattgag cttctaggat acccgtttgc cagagagggg caaacaagtc cagtcgattc
    17161 ttataggttt tagcaatgcc agaaatagct cccattggaa cgccatagta gggcttggtt
    17221 tcgccaattt tttcatatcg cttgagggtg ccagcatggc tagctgcttg aagttggttt
    17281 aaaatcgtat ctatttcatt cattgtgatt ctccgaaaaa aactggattg ctccagtttt
    17341 tatatgtagt cgtttagttt gcttttagta caaggcaacg aggtgcaggt tgctagaaca
    17401 gcctagaggc tattctaggt tggaaataag acatgcgaag caagtcactt tcgtggagta
    17461 cggcaaagcg agttaacgaa gtaatcaaag ataaactaaa tgactatttc aataagccac
    17521 gttcacgata ccatacatct ggcgtccata cccacttgca accgtagctt tctagcaaat
    17581 caaatgccgc ctcaggtccc atagttccag ctggataggt gtggagtggg acttggttgc
    17641 ttgcccacaa atcaacaatg cggtcaatca agctccagct tgctttcact tcttcccaat
    17701 ggctaaagtt agtagaatca ccatttagga catcgaaaaa tagtttttcg taagcttcgg
    17761 gtgaatttcc aagagcagtt gcattgtggc ggaagttgag tttggcagga gtaagagcaa
    17821 agtgggaacc aacttcctta ccgttgatag agagcatgaa gccttcagtt ggctggatga
    17881 agatggtcaa tacattggcc tcagaaggct gaccaaaaat atcttccgca tgcttgaagg
    17941 tgatggtcac gcgcgtgccc ttttctgtca ggcgtttacc tgtacggaag aagaaaggta
    18001 catcacggaa tcggtcagta tcgacgaaga agacgcctcc agcaaaggtt tctgtctgag
    18061 aagcttcggc aatatttggt tcatccaagt agctaacgta gtcttttcca tcgatagaac
    18121 ctgctgcata ttgaccacgg atgaagttgc gcttgaggtc ttcgtcagaa ggctgacgca
    18181 agtgttggaa aaccttgatt ttctcagcgc ggacatcttc ctccttgaag ctggctggct
    18241 tatccattgc tagaagggaa agaacttgaa gggcatggtt ttgcaccatg tcttttaagg
    18301 cgccagaatg atcgtagtag cctccacgat cctcaacacc aatcgcttca gcaaatgtaa
    18361 tttggacgtt atcgatgtaa tcgcggttcc aaatatgctc aaaaatgata ttggcaaagc
    18421 gaacagcgaa gatattttgc accatttctt tacctaagta atggtcgata cggtagattt
    18481 ggtcttcatt gaaggctgct gccaattcat cattgagttt ggtagctgta gcaaggctag
    18541 ttccgaaagg tttttcaata atcaagcgtt caaaaccttg tccgtcaaca atctgctcag
    18601 atttgaggtg tttggcaatg gttccgaaaa attcaggtgc catagagagg aagaagacct
    18661 tgttgtgctg ggtatcgtat ttttcacata agtcatcctg caatttacga agagctacat
    18721 aatgttccgt gtcattgaca tcatggcttt ggtagtagaa atgactagca aattcatgag
    18781 cttgacgtgg tgtgtcaggc agatcaccta gtgattcaat gacggtttgc tcaaaaaatt
    18841 ccttggtcca gggtctgcga gctgtaccaa ttactgcaaa gttttccttg atgtgtccag
    18901 ccttatagag gcgaaataaa gatgggtaaa gtttgcgttt ggcaaggtcg ccactagcac
    18961 caaaaattgt aaacaataca tgtgatgaca taatttcatt cctatctgtt gaatatcatt
    19021 aatagtatac cacaaattgt cagaaaattc actttttgag ttggaattat tagaaaacac
    19081 ggtagacata cggggaatct ggctgttcaa tctgaaccat cgattgtaat tcaagtgttg
    19141 ggagattttg tttcaacgat gtgtggtagg aaaccttgat tgttcctctg gcttttaccc
    19201 aagtattgtt aggaaattct gtggtagccc ccgtagagag taagccatat accccagaat
    19261 cagcaatgca gtgaataata ccaaagcgga aaaggaaaaa ttgctggcta ttgtcagggt
    19321 cattgtagac aaatccaatc atttcaatcg tttttcctga aaattccgta ggatagtcgt
    19381 agattgcttc catcacttcc atatagtttt cattagtaac aacaatggtt tcttcagtca
    19441 agtatctatc agcaatttca cgcatctggt tttgataggc agatttcgta aaataaatag
    19501 aagtatcagg cttgaggtac tgaacagtcg tcccttcttg gttttgtgta ttagtatcgt
    19561 tttctgctgc tagcgggaaa tgatagccct tggcagcaac agttgttgaa tccaggctta
    19621 ccgtaggaaa gagccaggct atagcaagag gaatgagcaa tagtccaatg cttgatagtt
    19681 tggcaatttt gctttttaaa tggctatgta ctcgaatttc ttttacccag acatacaatt
    19741 gtacgatggc aagtatgaaa gataaaacca tggatagata ggctagatag ctatagtgca
    19801 gattgatgta ttggtctaat tttccagaaa tatagagata catggtcatt tcaaagtaac
    19861 ctgcaagaat taaaaaacga atcatactac acctccaagt atcagactat atcccaaaat
    19921 aacgagagtg atagtaatga taaaaccggc tataaatttc cccttgaaat aatgtttcat
    19981 catgagcaag tttttaacat ccaccatggg tccgataact aagaaagcca ttactggggc
    20041 gaatccgaag ctggatagta gtgatgcacc aataaaggca tcggcttcag aacataggga
    20101 aagaagaaag gccagcaaca tcatcagtaa aatagctgtt aatggactgt gaccgatggt
    20161 agtcaggaca gcggttggaa tatagacttg tacgagactg gcaaatagac aaccaaagac
    20221 taggtaacgt cccgtatcaa aaaattcatc aatggcatga ataagtgcga agctaacttt
    20281 ttgccaactg gttttatctg aataatcatg ctggtgatgg tcaaacttgc ttcctttaag
    20341 aattggtcct tttacgaaaa aaccaagaat gattcccaat actagggata caatgatggc
    20401 tcctagggct ctataaaggg cgaaaagtag ggaatttcca aaagcggtaa aggttgcaaa
    20461 aaggacgata ggattaatga caggcgccgt tactaaaaag ggaacagcag tgtaacttgg
    20521 cacttttttc tctaatagcc gattgacaat agggacaata ccacattcgc aagacggaaa
    20581 aatgaagccg ataaaggttc caaatagaat ggcaagaaac ttgtttttag gtaagagttt
    20641 acgaacctta tctggtgtta taaacacatc gataaaacct gaaataatag ctccaatcaa
    20701 gacaaagggc aaggcttcaa tcatgataga caggaaaata gcccccgcct gtaggacgga
    20761 ggtaggtaat tgatcaagac caagcatatt attttttatc ctgattcaag ttgtttttcc
    20821 cggaattttc ttttgatttt ggatctggat actcaatttc ttccaatttt tcaaatgaag
    20881 caaattcttc cagcatcttt tctaaatcat cttgtcgttt ataggttata gccatagggc
    20941 acctccaaaa attttatata cacattatac attttttact aaaaattatc taaaggaatc
    21001 tgtttttatt gaagcgcaaa tatagttagc accctcaaat catgatataa tattcttatg
    21061 aaaacaagaa tatcagaatt agttagcgtg ctcaatcaat acgctaaaga gtattatcaa
    21121 ttggaccaac ctagcgtatc agatgcagaa tatgatacgc tttatcgtga attagtagag
    21181 ctagaaacgg ctcatccaga actgatttta ccagatagtc ctacccatcg ggtcggggga
    21241 aaggtgttag acggatttga aaaatataat catgtttatc ctctttttag tttgcaggat
    21301 gccttttctc gtgaagagtt agaagttttt gaccagcgag ttcgcaagga atttcctcaa
    21361 gcaacttata tctgtgaatt gaagattgat ggtctatcta tttccctgac ctatgaagcg
    21421 ggtaatctag tcgtgggtgc tacacgtggt gacggtagtg tcggtgaaaa tatcacagaa
    21481 aatctcaaac gagtggctga tattcctttg accttacctg aagctgtgga catcactgtc
    21541 cgaggtgagt gttatatgcc aaaagcttcc tttgaccgtg ttaacaaaca gcgtcaggag
    21601 gctggtgaag ctgaatttgc caatccgcgt aacgcagcgg caggaactct tcgccaatta
    21661 gacacaggtg tcgtggccca gcgtggtctc gctaccttcc tctaccaaga agctagtcca
    21721 tctgaagcga ctagtcagtc acaagtactg gagaaactgg atgctctggg atttgtgacc
    21781 aaccacgaat attgcttggc ggagtcgatt gatgacacgt gggattttat tgaaaaaata
    21841 gcagagcgta gagatgattt accctatgag atagatggtg ttgtcatcaa ggtaaatgat
    21901 ttagctatac aagaagaact aggatttaca gttaaagcgc ctcgatgggc agtagcttac
    21961 aagtttccag ctgaggaaaa agaagcagaa atcttgtcgg ttgattggac tgttggccga
    22021 acaggtgttg tgacaccaac tgccaatctt agtcctgttc aactggcagg aacgactgtc
    22081 agtcgagcga ccttgcacaa cgtagattat atcgccgaaa aagatattcg tattggcgat
    22141 acggtcattg tttataaggc gggagatatt attccagcag ttctgaaagt ggtggacaag
    22201 tatcgaaaag agcaagaaat catgcccatt cctagtcatt gtccgtcttg tcagagcgac
    22261 ctacaacact atgaggacga agttgccctc cgctgtatca accctatttg tcctagccag
    22321 ctgatgagta agttggaaca ttttgcaagt cgagatgcca tgaacatcgc agggctaggg
    22381 tcttcaatcg ttgaaaaact ctttggagca ggcttggtac acgatgttgc tgatatttat
    22441 aaattaactg ttgatgacct attgaccttg gaaggtttca aagaaaaatc agctgacaag
    22501 ctctatcaag ccattcaaac ttctaagagc aactcagcag aacgcctcct atttggacta
    22561 ggtattcgcc atgtgggtag taaggcaagt aagattttag tagaaaaatt tggtgattta
    22621 gaaactctag catttgctga tcaagaagca attgcttcgc tagaaggtct tggtcaggtt
    22681 attgctaagt ctttgacaac tttttttgct agtgagggtg cgcaacaact tttagccgaa
    22741 cttaaggaag ctaaggtaaa cttaacctat ctcggacaag tagtagatga aaatgctgcg
    22801 ctatcgggta tgacagttgt actgactggt aaattggagc gaatgaaacg aaacgaagcc
    22861 aaagccaaat tagaagcttt aggggcaaat gtagcgggat ctgtttctaa aaaaactaat
    22921 cttgtggttg ccggaacaga tgcaggcagt aaattgacca aagcacagga gctaggtatc
    22981 gaaattaaag acgaggcttg gttagagagc ttgtaaaggt aaaacgatgg aagaaagaaa
    23041 acgtgctaga ctaatatata atccgacctc aggtcaagaa atcatgaaga aaaatgtggc
    23101 cgaagtattg gaaattttgg aaggctacgg ttatgaaact tcagctttcc aaacaactgc
    23161 tgagaaagac tctgcaaaga atgaagctac acgtgcggcg cttgcaggct ttgacttgat
    23221 tatcgcggct ggtggagatg gaacaatcaa cgaagtcgtc aatggaattg ctccgcttga
    23281 aaaacgtccg cagatggcca tcataccgac tggcaccacc aatgactatg cgcgtgcctt
    23341 aaaagtgcct aggggaaatc ctgtagaagc agctaaggtt atcggtaagc agcagaccat
    23401 tttaatggat attggtttag ccaaaaatca aaaaaatggt tttcatcaag aacattattt
    23461 tatcaatatt gctgcggcag gtacacttac ggagttgacc tacagtgttc ccagtcaact
    23521 taagaccatg tttggctatt tggcctatgt agtaaaagga gcagaactcc tgccacaagt
    23581 acaatttaca cctgttcgtg tagagcatga cgagggagta tttgaaggct cggtttcaat
    23641 gatttttgtt gccttaacca attcaattgg aggttttgaa cagattgttc ccgatgctaa
    23701 gttagatgat ggtaatttta ccttattgat ggttaaaaca gggaatctat ttgaaattct
    23761 gcatctgatt cgtcaagtct tagacggtgg caaacacatt gagagtgatt tagttgaata
    23821 cataaaaacc aagagcctat ccatcgaaaa tcttaaccca gataaccgtc tactgctcaa
    23881 tctagatgga gagtttggtg gggaagcccc tgttcgtctg tacaacctat caaaccatat
    23941 agagtttttc gcagatacag atctggtttc tgaccatgca atcactcttg atactgatca
    24001 gatgaatcga gaagatatgg ccaaacgatt cattgaagaa acagaccata ttgatggagc
    24061 tattaaatag gaagaaaaga tgaaatactc ttttcttttt attttacaaa aacgaattaa
    24121 acgcttacaa tggcggtatt ttcttgacaa atagatgttt taggagtatc cttacatggt
    24181 attaaatttt aaaaggagaa ttcgttatga gtttaggcgc attggccctt ggattggcct
    24241 gtcttggtgt aagtatcggt gagggactgt tggtggcttc ataccttagt tcgactgcac
    24301 gtcaaccaga aatgcaaagt aaattgatgg ctggtgtatt tttgggtgtt gcctttatcg
    24361 agggaacttt cttcgtaacc ttggctatga catttgtctt gaaatagtag aaaatagaga
    24421 aatagaaaag gggggaacct ccattggaag aacatttaag tccaaccctt acccttggtc
    24481 ccgtaacctt tgacctgacc atggtattgg tttctgtcat taccatttcc attattttct
    24541 tacttgtttt ttgggctagt cgtcggatgg agctcaagcc taaaggaaaa cagaatgttt
    24601 tggagtacgt ttacgaattg accatcaatt ttacaaaagg gaatcttggc gatgcggaag
    24661 caaagcggta ttccttgttc ttctttacag tctttacttt tcttttggtt gccaataatc
    24721 taggtttgat gaccaaattg gaaacagcag aaggacataa tttgtggact tctccaacgg
    24781 ccaatatggc ttacgatttc ggtttggcaa caattgcaac agtattttgt catgttgagg
    24841 gtattcgtcg tcgcggtttc aaggcatacc tcaaatcttt tgtgacaccc tgggctatgg
    24901 ctccaatgaa cattttggaa gaagtgacca accttgtgtc gcttgctctt cgtctgtacg
    24961 gtaacattta tgctggtgaa gtgcttgtct ctcttcttct acaattatct caacaaagtg
    25021 cacttgcata tccgattgcc tttgctctga acgttgtttg gacagcattt tctgtattca
    25081 tttcatgctt gcagggatat gtatttatca tgttggtatc tatgtactta aataaaaaaa
    25141 tcagtagtga gagtgaatag gaaagggaaa gacaactatg gcaacaacta ttacaatgca
    25201 atctagtacc attcttggaa actttatctt ggtaacagtc tcatttgcag tacttattat
    25261 tcttattcgt gtttttgcat gggataaaat tacaggtatt tttgaagaac gtgccaataa
    25321 gattgcgaac gatattgatg ctgcagaaga aaaattaaca gcagcagcaa accttgttca
    25381 acaacgtgaa gatgagttgg tacagggacg tatcgaaagt caaaagatta ttcaagatgc
    25441 ggttgaacgt gcaaaactag agaaaaaacg aattttagaa caagctgaag ttgaggctca
    25501 agctctaaaa acaaaagcga caatggaaat tgaagctgaa aaacgtgagg cacaagaaaa
    25561 cttgcgcgtt caagttgctg aattggcagt tgatcttgca agcaaaatta ttttggaaga
    25621 tttggaccaa caagctcata gtaacttgat tgaccgttat ttggacaaac taggagacaa
    25681 gtagatgaac gctagagaaa atgccatcgt gcaaaaatat gctctatcat ttgttgaaaa
    25741 agtcagtgat catgcagata tttgggatat gtatgaccag atttctgact tgatttccat
    25801 cattcatgat agtaagctga atcgaatctt gctgtcagcg acagtatcga gagaagaaaa
    25861 ggctgacttt gtaaggacgg tacgtcaatc tagtttctgg caaatcaatg acttgattga
    25921 agatgttatt cgtgatggtc atgcagactt gcttcttgaa acccttgagc gtgtccaatt
    25981 acaaatcagt aaatttaaaa atgaatttga agcccgtgtg gtttcggtct atccgttgac
    26041 agaagctcaa aaagagcgtc tccgtcactt ggtagaacaa cgattttcct tgcgtgtacg
    26101 caatatcacg gaagaacttg atcaaagtct cctcggtggt tttattgtaa cggttaacca
    26161 taaggtaatc gatgcaagcg ttcggacaca gttgaaggac gttagaaaaa aactttagaa
    26221 aatagaaagt ggtgttcttt tgattaatgc acaagaaatt agcgctttac taaaacaaca
    26281 aattgaaggc tttcagcctg actttgacta cacagagact ggtgtcgtaa cctatatcgg
    26341 tgacggtatc gcccgtgcgc aaggtcttga caatgccatg agtggagagc ttttggtatt
    26401 tgaaaatggc accattggta tggcacaaaa cttagaaacc aacgatgttg gtatcatcat
    26461 tctcggacaa tttaccgata ttcgtgaagg gtcagttgtt cgtcgtactg gtaaaattat
    26521 ggaagtacca gttggttcgg ctttgattgg tcgtgtcatc aacccacttg gtcaacctgt
    26581 agatggtctt ggtgaaattc gtactagtaa gactcgtccg attgaatatc cagcaccagg
    26641 tgttatgcaa cgtaagtcgg ttaatgaacc gcttcaaact ggtcttaagg ctattgacgc
    26701 tttggttccg attggtcgtg gtcagcgtga attgattatc ggtgatcgtc agacagggaa
    26761 gacatctgta gctattgatg ctattctcaa ccaaaaaggc caagacatga tttgtatcta
    26821 tgtggctatc ggtcagaaag agtcaactgt tcgtactcag gttgaaacgc ttcgtcaata
    26881 tggtgctttg gattacacaa tcgtagtaac agcatcggct tcacaaccat ctccattgct
    26941 tttcttggct ccttatgctg gtgttgcgat ggcagaagag ttcatgtatg aaggcaaaca
    27001 cgtcttgatt gtttacgatg atttgtcaaa acaagcggta gcttatcgtg aattgtccct
    27061 cctgcttcgt cgtcctccag gtcgtgaggc ttatccaggg gatgtattct atttgcacag
    27121 tcgtttgtta gagcgttcag caaaggtctc tgatgaactg ggcggtggct ccattacagc
    27181 tctgccattt atcgaaacac aggcaggtga tatttcagcc tatatagcga ctaacgtgat
    27241 ttcgatcacg gatggacaaa tcttcttgaa ggacgatttg tttaactctg gtatccgtcc
    27301 agccattgat gcgggttctt ccgtttcgcg tgtaggtggt tcggctcaaa tcaaggcgat
    27361 gaaaaaggtt gctggtaccc ttcgtatcga cttggcatct tatcgtgaat tggaggcttt
    27421 tacgcaattt ggttccgatt tggatgcggc aactcaggcc aaactcaacc gtggtcgtag
    27481 gactgtcgaa gttttgaaac agcctttgca taagccactt ccagttgaaa aacaggtttt
    27541 gattttgtat gctttgacaa atggcttctt ggattcagta ccaatcgatg acattttggc
    27601 atttgaagaa gagttgtacg catattttga tttgcactat gatagtcttt tggatgtcat
    27661 tcgtacgacg aaagatcttc ctgacacaga tgaattgaat gctgctattc aagccttcaa
    27721 agaccagtct gtctttaagt aaaggagtga ataatggcag gttctctcaa tgaaatcaaa
    27781 tcaaaaattg catctactaa gaaaaccagt caaatcaccg gtgccatgca gatggtttcg
    27841 gcttctaaac tagccaaatc agagcaatta gcgcaatcct ttcaaatcta cgctagtaag
    27901 gttcgtcaga tcacaacgga cctcttgcgt ggagaattga tggcatccga tacgagcaat
    27961 ccaatgctga ttcgtcgtcc agttcaaaaa tcaggctaca ttgttattac atcggacagt
    28021 ggattaaagg gttcttataa ttccagcatt ttgaaggctg tgatggggat gatcgaacag
    28081 gaccatgact caaaagagga gtatgaaatt attgccattg gtagcatggg agctgatttc
    28141 ttccgtgccc gtggtatcaa tcctgtcttt gaattgcgag gtttagcgga caacccaagt
    28201 tttgaagagg ttcaaaaaat catttctaag tctgttgaaa tgtataagaa tgaactcttc
    28261 gatgagttat atgtctgtta taatcaccat gtcaatagct tgactagtca ggtgcgtgta
    28321 caacagatgc ttcctgttga ggatttggac cacaacgaag ctgatggtta tacatctact
    28381 tttgaattgg agccaaaccg tgaagtgata ctggagcaat tgttgaccca atatgcagaa
    28441 tcaaccattt acggagcgat tttggatgcc aaaactgctg aaaatgcggc tggtatgacg
    28501 gccatgcaga cagctacgga taatgctaag aatgtcatta acgatttgac aattcaatac
    28561 aatagggctc gtcaggcagc tatcactcag gaaattactg agattgtagc gggagcctca
    28621 gcccttgagt aatagaaata gaggaaatag aatgagttca ggcaaaatta ctcaggttgt
    28681 cggaccagtt gtagacgttg cgtttgcagc agaagataaa cttcctgaga ttaacaacgc
    28741 actcgttgta tataaaaatg atgattccaa acaaaaagtc gtgcttgaag tggctttgga
    28801 acttggtgat ggcgttgtac ggaccattgc catggaatca acggatggat tgacacgtgg
    28861 gatggaagtt ctcgatacag gtcgtcccat ctctgttcca gtcggtaaag aaacgctggg
    28921 tcgtgtcttc aatgtgttgg gagataccat tgaccttgaa gagtcttttc cggcagattt
    28981 tgaacgtgag cctatccata agaaagcgcc ggcttttgac gaattatcta cttcaagcga
    29041 aattttggaa acagggatta aggttatcga cctcctagca ccttatctaa aaggtggtaa
    29101 ggttggtctc ttcggtggtg ccggtgttgg taaaactgtt cttatccaag aattgattca
    29161 caatattgcc caagaacacg gaggtatctc tgtatttacc ggagttggcg agcgtacccg
    29221 tgaagggaac gatctttact gggaaatgaa agaatcaggt gttattgaaa aaacggccat
    29281 ggtatttggt cagatgaatg agccaccagg agcccgtatg cgtgttgctc ttactggttt
    29341 gactattgcg gaatacttcc gtgatgtgga agggcaggat gttcttctgt tcatcgataa
    29401 tatcttccgt ttcactcagg ctggttcaga agtgtctgcc ctcttgggtc gcatgccgtc
    29461 agccgttggt tatcagccaa cacttgcaac tgagatggga caattgcagg agcgtattac
    29521 ctcaaccaag aagggttctg ttacatctat tcaggctatt tacgtacctg cggatgacta
    29581 tacagaccca gctccagcga cagccttcgc tcacttggat tcaacaacta acttggagcg
    29641 taagttgact cagctgggta tctaccctgc ggtggatcca ttggcttcgt catcacgtgc
    29701 acttgctcca caaatcgttg gtgaagagca ctatgcagta gctatggaag taaaacgtgt
    29761 ccttcaacgt taccaagaat tgcaagatat tattgccatt ctcggtatgg atgaattgtc
    29821 agatgaagag aagaccttgg ttggtcgcgc tcgtcgtatc caattcttcc tctctcaaaa
    29881 cttcaacgtt gcggagcaat ttacaggtat gccaggttct tatgtgccag tagctgaaac
    29941 ggtgaaaggc tttaaggaaa tcttggacgg caaacacgac catctaccag aagatgcctt
    30001 ccgaaatgtt ggttcaattg aggatgtggt cgctaaagct gctaaaatga aattctagag
    30061 gtggcttatg ggacaaatga ctgtacaaat cgtaacacca gacggtatca aatatgacca
    30121 tcatgcagca tttgttttgg tcaaaacggt tgatggtgag atgggtgtct attctggaca
    30181 tgaagaactg atcgcagttt tggaaattgg tgaaatgaaa gtgcgtcgtg ttgatgatga
    30241 aaaccatgta gactggattg cggtcaatgg tggaatcatt gaagtcaaca aggatattat
    30301 tacggtcatt tcggattccg ctgagcggga acgggatatt gatattagtc gtgcagaacg
    30361 tgccaaattg cgcgcggaac gtgaattgga agaagcacag actgctcgta atattgatat
    30421 ggagatgcgt gcaacagtcg ccctccaacg cgcgataaat cgtattcgtg tcgggaagca
    30481 ttaatatata tgggattgaa cttggttcag ttccattttt taatttcatg gtataatgga
    30541 aacatggtaa tttcaatttt acagtttttt agtcatatat tgtttatcta tctggctcat
    30601 catctcttgg ttacaacagt tgattggtcg cggtggttga aggtgacggg ggacaatcag
    30661 cgtaaaatca atttgctgat tctctttctg gcaatagcac tggggtactt agtctcgact
    30721 ttctttttag aattgttgat gatgggacgc tcttttgcaa atatgtgatt taagtaagaa
    30781 aaggataaga aatggataca attattgtta caggtagtaa aaacggtttg aaaggacagg
    30841 ttgagattga gggtgcgaag aatgccgttc tgcctttatt ggcagcaaca gttctagcaa
    30901 gtcaagggca aaccaaattg actcaggttc ctattttgtc tgatgtctat acaatgaata
    30961 atgttgtacg tggtctggga gttcgtgtga aatttgacga ggaaacaaag actatcgata
    31021 ttgacgcaac aggtaaactt ggtagtgaaa ctccttataa gtatgtgagt caaatgcggg
    31081 cttctattgt tattcttggt ccgattttgg cacgcaatgg ttatgctaag gtttctatgc
    31141 caggaggttg tacaattggt agccgtccga ttgatttgca cttaaaaggt ttgcaagcta
    31201 tgggggctaa aattaagcaa cgtgcgggtt atattgaagc gagtgcagag aacttgcagg
    31261 gagctcatat ctatcttgat ttcccaagtg ttggggcaac gcaaaatttg atgatggctg
    31321 caactctggc gcagggtaca acggtattgg aaaatgcagc gcgagaacct gaaattgttg
    31381 acttggctat tttcctaaac aaaatggggg ccaaagttaa gggggcaggt acagagacga
    31441 ttacgattac tggtgtagaa gaattgactg gcgcagaaca tcaagtggtg caagatcgta
    31501 tcgaagcggg tacctttatg gtggcagcgg caatgactgg tggcgatgtc ttggttaagg
    31561 atgctgtctg ggagcacaac cgtccactca tttctaagat gttggaaatg ggagttgagg
    31621 tgacggaaga agctgaaggg attcgagttc gttcgcaagt ggataagctt aaacctgtaa
    31681 cagtaaaaac cttgccacac ccaggtttcc caacagatat gcaggctcaa tttacagccc
    31741 taatggcagt tgccaagggg gaatctacca tgattgaaac ggtatttgag aatcgtttcc
    31801 agcatttgga agaaatgcgt cggatggatt tgcattcgga aattttacga gatacagcta
    31861 tcatcacggg aggacttgct ctgcaaggtg ctcaggttat gtctactgat ttgcgagcta
    31921 gtgctgcatt gattttggca ggtttggttg ctgaaggtga gacgattgta ggtaaattaa
    31981 cgcacttaga tcgaggttac tatcgttttc atgagaaatt agctgcttta ggtgcaacga
    32041 ttgaacgtgt gagtggagaa gatgaaaatg gataaggata atcttagcta tgttggtaaa
    32101 aatttaatct tagtagcagt tgttttgttg attgctattt tggtgtttgt tttaggatta
    32161 atggttggtt acggtgtcat aggagatgga gacaatgtat ttgcggtgtt gtcaccagct
    32221 aagtggcaag aactaatcgg taaatttaca ggaaagtagg ctggacctgc ttttttgatg
    32281 gagagaaaat ggcgaagaaa aatgtaaaaa aacaagcgat gagtctgctc agcttattgg
    32341 ctacgattgt tgtagtagcg ggtggttatc ttttaagtga taacaagagc agtaacgttg
    32401 ctaattattc ctattatgtc aatcagtcta aggcaagcga gagcacacct agtcaggaac
    32461 tggctagttc agtattgaca gaagatgtaa aaaagcaact agggaattcg attgaatgga
    32521 atggtgctgg agcatttatt attaacggaa ataagactga tttagatgct tcagtctcta
    32581 gtaagcccta tgcggataat aagacaaaga ctgtgcaggg agaaacggtt ccaacagtgg
    32641 caaatgccct tttagccaaa tcaacgcgac agtataagag tcgtgaagaa acaggaaatg
    32701 gttcgacttc atggactccg cctggctggc atcaggtaca ggatttggat ggctcctatg
    32761 atcatgcgat tgataggggg catctgctgg gctatgcctt gattggcggt ttaaaaggct
    32821 ttgatgcttc aaccagcaat cctaagaata ttgcagttca aacagcttgg tccaatcagg
    32881 caagggctga ggattcgacg gggcaaaact attttgagag tcaagttcgt aaagctttgg
    32941 ataagaacaa acgtgttcgt taccgcgtga ccttgattta tgctgatgag gatgagttgg
    33001 ttccagtcgg aagtcatcta gaggcaaaag cagcagatgg tagcctagag ttcaatgtgt
    33061 tcgttccaaa tgtgcagagc ggtctcagta tcaactatca tagtggggaa attgcagtaa
    33121 atgagtaaag aaatcaattg ccaaactttc ttatttttga tagaatattc ttaattgaat
    33181 agaagtctgt gagactagta cacctatgga aactgttcag ggagttgagc cgtgactgca
    33241 agctcaatca gtgaaagttg gtcgaattca ctcacgcaag gacttagaac ctgtattcgc
    33301 agttcagcac ttccatctaa ggctagtttt tcagctactc atcgttagtt tttttcaaaa
    33361 tacagtcagt attccctcaa aaaactgcct tgattagcga aaaaccatct cttatgtgca
    33421 agcactttac ttgtgaatac aggttcatag aactaaggtc tgcttagcag atgaaaacgg
    33481 atggtaccgc gtgacaacgc tccgatacga gtggtgtcat gcgttttttt attggaggaa
    33541 ttatgtcaaa cattgaacaa cagttggctg aattaagcca aaccacgctt gaaaagttaa
    33601 aagaaatcca gcaccaagga gaaaaagaac tacaagacct gcgtgttgcg gttttgggta
    33661 aaaaagggtc tttgacggac ttgttgaaag gcttgaaaga cctgtctaac gaaatgaaac
    33721 caatcgttgg taaacaggtc aatgaagtgc gtgatgtgct gacagctgcc tttgaagaga
    33781 cagctcagaa ggttgcagcc gcaaaaattc aacaacaatt agcatccgaa actattgatg
    33841 tgaccttgcc aggtcgtcag gtcaaggtcg gaaaacgcca tgtcttgacc caaacttctg
    33901 aggaaatcga ggatattttc ttgggcatgg gcttccaaat cgttgacgga tttgaagtgg
    33961 aaaaagacta ctacaacttt gaacggatga acttgcctaa agatcatcca gcgcgtgata
    34021 tgcaagatac cttctacatc actgaagaaa tccttatgcg gacccatacg tcgcctgttc
    34081 aggcacgtac aatggatcaa catgattttt caaagggtgc cttgaagatg atttcgcctg
    34141 gacgtgtttt ccgtcgtgat acggatgatg cgacccacag ccaccagttc caccagattg
    34201 aaggcttggt tgtcggtgaa aatgtatcca tgggcgatct caaaggtacg cttgaaatga
    34261 ttatcaagaa aatgtttggt gaagagcgtc agattcgcct gcgtccgtct tacttcccgt
    34321 ttacagagcc ttctgttgag gtagatgttt cttgcttcaa gtgcggtggt gacggctgta
    34381 acgtatgtaa gaaaacaggc tggattgaaa tcctcggtgc tggcatggta cacccacaag
    34441 tattggaaat gagtggcatt gattcaacca agtactctgg atttgccttt ggtcttggac
    34501 aagaacgcat tgctatgctc cgctacggta tcaacgatat tcgtggattc tatcaaggcg
    34561 atgtacgatt ctcggagcag ttttaacgta gcactactta aggctgacaa agtcagctct
    34621 taagtagacg gaaatcgcta ttgagcgact ttcctagcta ccttactagg ctttcaagca
    34681 aaaaatatcg ttttgcttga aagccgtcgt gatttagtaa gtttgtcagg ttgtttaagg
    34741 tgaaaaacgg tagccgctat ggcggtctac ctactcccct cactaggttt agagttgaaa
    34801 aagtatcgtt ttcaactcta aactgtcgta atccgatact cataaatggt gctgaagcac
    34861 ctatttatga gacgacagtc gctatggcga actgtctaat cgtctcacta gctctaaggt
    34921 tgaaaaaatg tcgttttcaa ccttagaacg tcgtaactcc gcacgagtaa gtgaagggaa
    34981 atcggcatta agcgactttc ctagctacct tactaggatt tctagataaa aatatcgttt
    35041 tgcttgaact ccgtcgtaat tcgataaagt tagtagattg ttgattgaga gaagcggtag
    35101 ttgctctagc agcttactta atccagttag aaatgagagg caatgaaatg cagattgacc
    35161 ctatacgttt agaggaggtt tctgttttgc aggagctggc taagcagact tttgcagaga
    35221 ccttcgctca cgataatgcc cctaaggagc tggaggcatt ctttgaggag tcttattcct
    35281 tggaggtctt gactagtgag ttatcggacc ccaattgcca gcactatttt ttaagagttg
    35341 ataaacagat agctggttac ctcaaactca accaaggttc tgcccagacg gagcaggagt
    35401 tggaaaatgc ctttgagatc cagcgtatct atctcttgca ggcttttcaa ggccgcggtc
    35461 ttgggaaggt cttgtttgaa tttgctttgg aaaaagcaga gcagtctagt tgtgactggg
    35521 tctggctggg agtctgggaa cataattaca aagctcagca attctatgca aaatacggat
    35581 ttgaaaaatt tggccagcat gaatttgcgg tcggtgataa gattgatgtg gattggctat
    35641 taaaacggcc tttgcaccag aaaggataat atgttagtaa gttacaaatg gttaaaagaa
    35701 ctggttgact ttgatgcgac aagctatgaa ttgtctgaaa aaatgtcaac aacaggaatt
    35761 gaagtagaag gggttgagca aaagagtgca ggcctttcta agttagttgt cgggcaggtt
    35821 gtgtctgctg agcccattcc agatactcat ctcaatatct gtcaggtcaa tgtaggcgag
    35881 gaaatcacgc aaatcgtttg cggtgctcca aatgtgaaag ctggtatcaa ggtgatcgtc
    35941 gctctgccag gagctcgtat cgctggcaac tacaagatta agaaaggcaa aatccgcgga
    36001 gttgagtcct tgggtatgct ctgctcattg agcgaaatcg gtgtgtccga ctctgtggtg
    36061 ccaaaggtct atgcggacgg aatctaccac ctgccggaag atgcagtcgt gggtgagcca
    36121 gtcttttcat atcttgatct cgacgacgag attattgagt tgtccatcac accaaaccgt
    36181 gccgacgccc tttccatgcg tggcgtggct cacgaagtgg cagctatcta tgacagcaag
    36241 gtcaacttca agcctgtagc cttggatgaa agcgacaaga aggccagcga tgtgattgaa
    36301 gtggccattg agtcggacaa ggtgactgcc tacacggcgc gtgtcattga aaatgtcacc
    36361 atcgcaccaa gcccacagtg gttacaaaac ctgctcatga acgcaggtat tcgcccactt
    36421 aataacgtgg tggacattac caactacatc ttgctctact tcggtcagcc aatgcacgct
    36481 tttgactttg acaagtttga tggcaagaaa atcgtggctc gtcaggcaaa agagggtgag
    36541 aacttggtaa cccttgacgg cgaagagcgt gacttgattg ccgatgacat tgtcatttcc
    36601 gttgcgaaca aggcagttgc cctcggtggt gtcatgggtg gtgccaatac agaaatcgac
    36661 aacagctcta agaccgtcgt gctggaagcg gccctctttg acggcaagtc tatccgcaag
    36721 acctcgggtc gcctcaacct tcgctctgag tcctcttctc gctttgaaaa gggcatcaac
    36781 gtagcgactt tgacggaggc tatggacaca gcggctgcta tgattgcgga actggctggt
    36841 ggtcaggtct tgtctggcat cgtttctgcg ggcagcgtgg acacttcgga tgtcccagtc
    36901 acagcaacca ttgattacgt taaccgttcg ctcgggacca atcttgacta tgctcagatc
    36961 gcagatattt tccgtcgttt aggtatggaa acaactggcg atgcaagtca gtttacagtc
    37021 gcagtaccac gtcgccgttg ggacattcgc attccagctg acttggtaga ggaaatcgct
    37081 cgtatctatg gctataataa tctgccgacc actcttccga aagaggacgg aacagcaggc
    37141 gagttgaccc tgacccagaa catccgtcgc caagtacgta gcctggcaga aggtgcaggt
    37201 ctgacagaaa tcatttctta tgccttgaca acgccagaaa aggcagtgga gtttgcggct
    37261 cgtccaacca cagtgaccga actcatgtgg ccaatgacgg ttgaccgctc tgccctccgt
    37321 cagaacatgg tgtctggcat gttggaaaca gtggcctaca acgtagctcg taagaacaag
    37381 aatttggccc tctacgaaat cggtaaaatc tttgaacagt ctggcaatcc aaaagaagac
    37441 ctgccacaag aaatcaacaa gtttgccctt gtcttgacag gtttggtagc tgagaaagat
    37501 ttccagacac cagctgtacc agttgatttc ttccatgcca aaggaatttt ggaagctatc
    37561 tttgctcatt acaagttggc agttgacttt gtggcaacca gtgagattgc tgctctgcac
    37621 ccaggtcgta cagctgaaat ccatttgaat ggggcagtta tcggctttgt cggtcaggta
    37681 catcctaaaa cggctaagga ctacggtatt cctgaaacct atgtggctga aatcaatctg
    37741 gatgcgattg aagaagctct ccagcctgct cagccattta ccgaaatctc taaattccca
    37801 gcagttagcc gtgatattgc cctgctcttg agcagtgatg tcaaacatca ggatgtcctg
    37861 gatgccattg ctggtgctgg cgtgaaacgc ttgaccaagg tgaccctctt tgatgtctat
    37921 gcgggcagca atattgaggc tggtaagaag tctatggctt ataacctgac cttccaaaat
    37981 cctgcggata gcctgacgga tgaggaagtg gctaagtata tggagaaaat cagtaagtcg
    38041 ctcgaaacac ttggagctga aattcgttaa catgtaaatc ttgtgaaatc ctagtctgcg
    38101 ggctaggatt tttggaggga agtatgaaca ctcaagatat tcaagaaaaa ttttttcgag
    38161 aaggcaagct tatcgttatt cctaaaaaat taaaaagtaa gcaggtcttg tttgcctatt
    38221 tacaagaaga gttggctaag aaaggctcgg cattcaccga aaaagaagtc aatgcctttc
    38281 ttgctgaagt ctatgatgat tatgctattt taagacgcta tttggtagat tatggctact
    38341 tatcgcgtga tcagtatggt ttggaataca gggtagaaga aaagagatga ttgcggtcat
    38401 ctcttttgtc ttacaaaata aagggttcaa tcttcaactc tatctggttg ccgtacttgg
    38461 ccagtaaatc gtctgccagg ggataataga gtgttcgtag ttgttcaatt ttgtcaggaa
    38521 attgtttgcc gatgtagtca aacttgcatt cgattgttaa gaaaagttgg tggaagagtt
    38581 cgttgatctg gttcaagcgg gcaatcattt cttcgtcttc tttgagaaaa tcagggattt
    38641 ctgagcgatt gttgacaaaa ccgtcgatga gttttacggg gaaagagccg tattctagga
    38701 caaattcgta catggggttc tcctttgtta tcattatgct aattgtaaca cagatcgaaa
    38761 tatgacaaaa gaatttcaac tttattgtag tttaagtttt gtttaaattt actttcagtt
    38821 tcgtttaaag gttattcagt aaactaagta ttgtcaatga ggcagatatt tgcttagaag
    38881 tttttagata aagagggaaa aacatgaaaa ctagaatcgt acaaaaacaa tttaaacgta
    38941 aagaaacaaa atatatcgtt gataaagaaa cgtttgcctt gctagaaaaa gatttgcaga
    39001 aatatatggt ttcagatgag tttgcaactt caaccattac gaatatttat ttcgacaatg
    39061 aagagttcga tatgattcaa gattccattg ctaagaagaa tggtcgagaa aaaattcgga
    39121 tgcgtgtcta cgattctaaa ccttctgaat caagtcaagc ttttcttgaa atcaagaaaa
    39181 aagaaaataa aattggctac aaataccgct taacttcaaa ccctgtttct gtaacaaact
    39241 atatcgaaaa tggagtgatt gattccacaa ttaaggacga taaagttaca tcagaactag
    39301 agcaattgag agaacgctac gggactatta agccgaagat gtatatctac tacgatcgcg
    39361 tatcctataa aggaatcgaa gacaaaaaag ttcgtctcac aatcgataag aacttacttt
    39421 atcgagacta cgatgtggat gcaatggaag gtaaatttgg taaggacctt ttggatccaa
    39481 caaaagtcat catggaagta aaagttccag aagaacgacc agactggttg gtagctcttc
    39541 tcgaaaaata ccaaatcgaa aagcaatcat tttcaaaata tggcaatgcc tataagcttg
    39601 cccacaacat tactggagag gaagtaagca aacatgcagt tgtttaatag tatcttttca
    39661 acggccaata gcagtatcac cttaacacag atggcgatgg tttttgcagt tagtctatcc
    39721 atgggggtac tcttagcagc tgtttataaa tataaatcca attatacaaa ggaatttgtc
    39781 atcacactaa gtctaatgcc ggcattgatt gcagtaatca tagcattggt aaatggtaac
    39841 ttaggagcag gtgttgcggt agcagggact ttcagtctta ttaaattccg ttcagcggca
    39901 ggttcttcga aggaaatgct tgcagtcctc ttagcgatgg ctatcggtct agcgacaggg
    39961 atgggcttcc taggtttggc tgtctttatg acggtcatcc tatctgcttg tatcttgatt
    40021 tttgaaaata tcagctttgc tcaagtcaat caaaatcgtc gtcatctctt ggtaacagtg
    40081 ccaatgaatt ttgactacga ccaatttttt gagaaacaat ttggtgcata ctgcaagcaa
    40141 gccgacttgc tttccctcaa gtacaagaag aaaaaagaag cgctgatctt agaatatcaa
    40201 gttctccttg ataagaagat tacagacaaa cgtttggtag atacagtatt gtcagccggt
    40261 cccttggatg tcgtattgaa caagcaaatg ccgaagaaga agtatttgta aaacaaagaa
    40321 gccctggatt tccaaggctt tttcgttttt tattagctta ttcttcataa aaatcaacgc
    40381 tataatcaag cagtttgtcc ccgtcatagc ggaaacaagc ggaaaaaaat ggtttgtcct
    40441 ctaatagcca ttcttgaaag tgtctgtccc cttcccaggt tggtttggag agcacttgat
    40501 cataaggaac ccattctaaa tcgccttcgt tgcagtcaat aagacttcct tcaaaaccag
    40561 ttatcttaaa gacataggtg taccagtcag tgtttggagt aaagtctgga aaggtgatga
    40621 ctccttttag agcgtgtttg gtgactgtta gccctgtttc ttcaaagact tctcgaatag
    40681 cacaggcttg cggtgtttcg ccgggttcca gtttgccacc aactccaatc cattttcctt
    40741 gatggacatc gttttctttc ttgtttcgat gaaggagaag aaattccttg ccattatcaa
    40801 tgtagcaaat cgtagccagt tggacaggtt ttttggtcat agtagctcct tgtagttgat
    40861 ttatcctatt ataccacaaa ggtgagagtg tctggcattc tgaacgggga cagtttgttg
    40921 tttagaatgt tgaaagccct tttctgaaaa cagtttttag ggtataataa gaacatcaaa
    40981 ctatttagga tgcattatgt caaaacaaga acaaatcgaa caaacaattt atcaattatt
    41041 ggaattattg ggtgaggacc caaatcgtga aggtttatta gatacgccta aacgggtcgc
    41101 taagatgtat ttagaaatgt ttaacggcct agaagaggat cccaaagacc aatttacagc
    41161 tgtcttttca gaaggtcatg aagaggttgt tttggtgaaa gatattccct ttcattctat
    41221 gtgtgaacac catttggtac ccttttatgg cattgcccat gtagcctata ttcctagcaa
    41281 ggggcgtgtg acaggtctta gcaaattggc gcgtgcagta gaggtggcaa gccgtcgtcc
    41341 tcaattgcag gagcgcttga cccatcaggt tgcccatgcc cttcaagatg cccttgaacc
    41401 ggaaggtgtt tttgtcatgg tagaagcaga gcacatgtgc atgagcatgc gtggtattcg
    41461 caagccaggt agtaagacag tgaccacagt tgcccttgga aaatacaagg aagatgccat
    41521 cttgcgccgt gaactcttat ccatgatcca caataaatag gaggttctat gtctattgaa
    41581 caattagccc atcaagtaac cattatgggg attctcaatg tgacacccga ttcattttca
    41641 gatggtggtc actataatga ggtggagtct gccttggtac aagtagaaaa gttgttggct
    41701 gagggagcta ccgtcattga tgttggtggt gaatccactc gtcctggcgc aacatttgtg
    41761 tccgaagaag acgagattgc tcgtgtggtt ccgattatcc gcgctatcaa agaaaactat
    41821 gactgtcttg tcagcatcga tacctataaa acaggcacag cacgtgcagc acttgaagca
    41881 ggcgcaaata ttttaaatga tgtctgggca ggactttatg atggagatat gttagctctg
    41941 gctgcggagt acaaggtacc aattattctc atgcacaacc agaaagacga aagctatgcg
    42001 gatgttgttg gagaagtcaa aaactttcta gctgagcgtg ctcaagcagc acttgatgct
    42061 ggtgtttccg cagaccagat ttggttggat ccaggatttg gcttttcgaa gaatgtccaa
    42121 cataatctgg acctcttaca aggtttggaa cagattactg gtcttggtta tcctgttctg
    42181 tttggaattt cccgtaagcg cgtggtagat tatctgcttg ggggaaatag tttaccaact
    42241 gaccgcgatc aagcaacggc agccttgtct gcctgggcag tccaaaaagg ctgcaaaatg
    42301 gtccgtgttc acaatgtcgc tgccaaccgt gacatcgtta aagtttggga ccaattgact
    42361 tctggaggtc atcatggata agatttctct caataaatgt cgcttttacg gctaccatgg
    42421 agccttcaaa gaagaacaag ttcttggtca aattttcaca gttgactgtg atttgtttgt
    42481 tgacctgaca gcagcttcac aaactgacaa tttagaagac acagttcact atggtatggt
    42541 ctttgaaacc attaaagcag ttgtggaagg taagccctac atccttatag aaaaggtagc
    42601 aggtgttatt tgtcaggagc tttttgatca atttccaaag gtggagaaga ttcgcttggc
    42661 catttacaag gaaaatccgc ccattgctgg acactatgat tctgtcggaa ttgaattgga
    42721 gcgtgaacga ccatgaagca tctagcctat ctcagtatcg gagggaacat gggcaatcgg
    42781 caagcctatt tacaggcagc cctagacaaa ttagccagtc atcctgactg ccgacttggt
    42841 ttggtttctc ccatctatga aactccagct tggggcaaga ccgaccaggc tgatttcctc
    42901 aatctagcct gtcaagtgta tactgatttg tctgctcagg attttctaag cgtttgtcag
    42961 aacatcgaac aagagttgga ccgagtacgg attgaaaaat ggggccaacg caccattgat
    43021 ttggatatta ttttttggga tgagcaagtg atagacgaag aaaatctcat cgtaccacat
    43081 ccttatgcac atgagagggc atttgttctt ttaccactgg ctgatattgc agcagattat
    43141 cgacatcctg gtcttggaca aagggtagaa gtgctagtaa gtaatttagg agatacgtca
    43201 gacattaaaa aaatctccct tgactaggaa gggaaaataa ggagaactat ggaaatttta
    43261 gcaattttag gagttttact ggccgttgtg gccattattt attggactac aaagaatcta
    43321 catgtcattg ttgcagcgcc attggctagt ttgatcatca tcttgaccaa ccagatgaat
    43381 attttggagg ttatgctagg caaagagcag tcttatatgg cgggcttagc aggttttttg
    43441 attaataatt ttgccatctt tatgttgggg tctatcttgg cacgttatat ggaggcaagt
    43501 ggagccacgc agacgattgc caatagcatt ttgaaagtaa tgggaaagga tagtccctat
    43561 aagggcttgt tagccatcac tttgattgct tccattctga cctatggtgg tgtcagtatt
    43621 tttgtagtta tttttacctt gcttcccctg tcacgaccac ttttcaaaga attgaatatt
    43681 aactgggccc tttttccaat tcctgtcttt ttgggagccg gtacttatac gatgacaact
    43741 cttcctgggg caccttccat ccagaatgtt attccgacaa aagttttggg aactagcttg
    43801 accgcggccc ccattatcag tttggcagcc agcttgacgc tattagtatt tggcttgctc
    43861 tacatggcct actgcctcaa gaaaagtcta gcaaatggag agacgtatac agaagaagag
    43921 gatgaaactg cagtagtggt agctgataag acaccaaatc tatttttatc agtcttgcct
    43981 ctattcagtc ttattgggac gattttccta atgagtaaaa ctccgaatgt actagcaatc
    44041 ggtttgcttg tttcaattct catttcagcc ttgatttttt atccatattt gccaaatcaa
    44101 aaagatattt tgaatgctgc gacaacggca tctatagtgc ctgcttttgc aacttctagt
    44161 acagtagcat ttgggacggt gttaaccttg tcagcaggtt ttgcagtcat tcaagaatgg
    44221 attcaacaaa taccaggatc gccgctgatt agtttatctg tttcgacagc attggttagt
    44281 ggtattatcg gttcctcttc tggtgcagta ggtattgctt caagtaattt ccttcctgcc
    44341 tatttagaaa tggggattaa tccagagttg ctgcatcgtg tagtagttgt tgcatcagct
    44401 atcttgacag ttgtgcctca gtctggcgtg atgattacct tccacaatct atcgaaatta
    44461 agtatgaaac gtggactcaa gtattcattt atcctagtga cagttgggca tttgttagcc
    44521 ttacttgtga ttttactgtt ggcacctttg ctatattagg attgattaac aaacaaataa
    44581 aagccctgcc gaatggcggg gcttttatgc acgaataaca agaagtggct taagaccaaa
    44641 acttctctgc aatttcttga ccttgtttaa tttttgccca ctgttgcggg atggccaatt
    44701 cattacctga atcacatgaa gcgaatccac attgatgtga caagtagaga cgctcttttg
    44761 gaataatctt gcttgcttcc tcgagtaatt tgtaaacacg ttcttcatca tccaaatcag
    44821 aagttttact tgaaagtaga ccaagaacga cttcgacatt cttgtcacgc aggctttcca
    44881 aagcttttaa atcacctgca cgttcatcat cccactcaag gaagaatcga tcgtattttt
    44941 ggtcacgcag gaatttttca gcaatagctt cgtaagttcc gccagctgca gagcgacttt
    45001 catagttacc acggcagttg tgcgtccaga cggtcaagcc aatttcatgc ccgtaatcaa
    45061 taacagcatt attgatagca acaaactcgt cagccaaagc agccaatgct tcagaatcgt
    45121 cttgtggcaa gaaaggtaca gggttagcag ggtcgaataa ttcccaaagg cagtcatcaa
    45181 attgaacgat ttgtccacca gcttccttgt actggtctaa aaattcctta taggcagcga
    45241 tgagcccggc ttttaattca tcacgagttt tgtagacctg atttggtcca acttgtccat
    45301 tgaaaattgt caattcatta aaggcatggg ctggaccgaa aatagtctgt tttgttacag
    45361 tttctcctgc taattctttc acttgtttga aaatatcaat gaaatggtga ttttttgcag
    45421 aaagtggagc agtaatacgc aatccaatat ccttacgtgt ttcaaaaatc tgtccatcat
    45481 ggtctttaaa tggataacca tgctcagcaa tgtaacgctc gataccatcg aagccccaga
    45541 gaaaatctag gtgccacatt gaacgaccaa attctccatc tgtcacaata tccaaaccgt
    45601 tttctttttg ttctgcaaca attttttgga tgagtgaagc ttcagtttct ttgtaaccat
    45661 cgaagtcatc atagaatggg tatttgatgt cctcacgagc ttcgatttgt cgtttaaatt
    45721 ctcctaagtt tgctggtcga agaagtgaac cgactaattg gaatcttgaa gttgtcatat
    45781 atgtatctct ctttctttcg ttttagtgat gaacctattc taactcataa gctatcattt
    45841 ggaaaatagt tattttcatg gcaaatccat agttaaaaac tataactaga aaaaatagaa
    45901 ggaaataact ttctatcatt tgtcaactat ggtataatcg aaagtgctga aatccgaaca
    45961 ttaggagact taggagaaaa atgaaaaaac aatcaccctt tataattgca ggaatcgtca
    46021 tgctaggggt cgtgatgcgt gcccccttta cagctttgcc tgctattttg acagatgtgg
    46081 cagcaggact gggagtagaa gtgagttcat taggaatttt aacctctatt ccgctcatca
    46141 tgtttgctct ctgttcatcc ttagcaccgc gtcttgcggc taagtttggc atggaaaaac
    46201 taatgggcct agtcttactg gttatggtac tgggttcagg aatgcgagtt ctcaacttac
    46261 cagcccttta cattggtaca atgcttgttg gtgctacaat agcatttatt aatgttttgc
    46321 taccaagttt ggttgcggct aattttccaa agaaaattgg tctgtatacg acgatttata
    46381 tcactctcat gggggtggcg gcaacagttg catctatgat tgctgttcca attgtatcct
    46441 ctagttcttg ggaatttttt attctattaa ttacaggatt ggtatttatg gctttcctaa
    46501 tctggttgcc taatgtaaga aataaccatc gatttgcaag tgagaatcaa ggaaaccaga
    46561 aatcatctat ctggaaaaat aaagcagcga ttgccttttt gatatttggc ggactacaat
    46621 cagtcctcta ctatacagag attacctggt tgccaactat ttctcaatca gttggcttta
    46681 gtaaagcaga agcagggcta atggctggct tcttcaatat gacagctatt cccatgtcta
    46741 tgattatccc tgcagttctt gctcgtcaga caaaagaaat gcgtcgaaat atcatgctgg
    46801 ctatttcatc tgttaccttg cttggtttgg tcatgatggc attgattccg accaatctca
    46861 ttctctggtc agtgcttcac attattttaa gtttttcaaa tgcagccctc ttcccttata
    46921 tgatgttgag ctttactttg aaaacaagca acagccaggc tactgcccag ttatcaggaa
    46981 tggtgcagac aggtggctat ctcattgcag catttggacc aggtcttctc ggttacagct
    47041 atccaatctt cggaaactgg atgccattga ttcttgctct ggctatcgtc acacttgcca
    47101 tgatgtggac cattgtgctg attgagaagg aagatattat tttataagga atgatctctt
    47161 agaagtttta ttattttctt tttgaaaata gcagagcttc taagcttttt ttgtaaacaa
    47221 aaaaagctgg acatttgcca gctttttaat gtgccacacg tttacgagca gcttttttac
    47281 gattttcctc aatgaaggct tctttctttt cttctggttc aatgattgtt ttgtgaacag
    47341 tgaagactgc gcctgctgca agagcaactg tagaaagaac acctgtcaag aaacctttac
    47401 caaaaccttt agccatagtt atttctcctt tacttgtgtt ataatagatt ttagcgaaaa
    47461 aacaaaatat tttcaaggaa aaagatgaaa actaaagtta ttgtggtcat tggaccaact
    47521 gcggtaggaa aaactgcttt aggaattgaa ttggcccagc gctacaatgg agaaattatc
    47581 agcggtgata gccaacaagt ctatcgcaaa ctggatatcg gtacggcaaa ggctagtcct
    47641 gaagagcagg ctgctgcggt tcattacttg attgatgtcc gagatgtgac cgagggctac
    47701 tcggcttatg aatttgtagc agaagccaag gctttgattg cagacattac tagtcgtggc
    47761 aagttgcccc ttatcgttgg aggaactggg ctttacattc agagcttgct tgaaggctac
    47821 catctgggcg ggctggttga ccaggagcag gttctggcct atcgggcaga gcttgatagc
    47881 ctgtctgacg aggttttgga aacaatggca gagcaggcag gtttgacggt cgagggaaac
    47941 agccgacgga gaatcattcg tgggttagaa ttgaaaaaat ttggcaaaaa cttagaaaat
    48001 acagagccag aatatgagtc tctttacatc tgcctgacgg atgacagaca ggttctttac
    48061 gaccgcatca atcagcgagt ggataagatg atggcggcgg gcttactgga tgaagttagc
    48121 tggctctacc aagaacatcc ccaagcccaa gctgctatgg gaattggtta caaggaattt
    48181 ttcccttatt ttgcaggtga actttcgcta gaagaagcaa ttgataaagt caagcaaaat
    48241 agccgccgct ttgccaaacg tcaattgact tggttcagaa atcgcatgca ggttcccttt
    48301 tactcagtag gcgatccaga ttacaagtcg cagattttca ccgctgtgga ggaattttta
    48361 gatgattgaa acccagaaag aacaagaacg cgccctcctg gttggagtgg aactacagca
    48421 gacagataat tttgacatgt ccatggagga gttggcaagc cttgctaaga cagctggcgc
    48481 tctggtcaag agagtctaca ctcaaaaacg agaaaaatac gacagcaaga cctttgtcgg
    48541 ctcagggaaa ttagaagaaa ttgcccagat ggttgaagct gatgagattg ataccgtcat
    48601 tgttaacaat cgactgacac cccgccagaa tgtcaatctg gaagagattt taggtgtcaa
    48661 agtcatcgac cgtatgcagc tgattttgga tatttttgcc atgcgggcac gaagccacga
    48721 aggaaaactg caggtccacc tagcccagct caagtacatg ttgccacgtt tggttggaca
    48781 gggcatcatg ctcagccgtc aggcaggggg tatcggctct cgtggaccgg gtgaaagcca
    48841 gttggagctc aatcgtcgaa gcattcgcaa ccagattcat gacatcgaac gccaactcaa
    48901 aacggtggag aaaaaccgag cgactgtccg tgaacgccgc ctacaatcag gcgtcttcaa
    48961 aatcggtttg attggctata ccaatgctgg taagtccact atcatgaatg ccatgacgga
    49021 taagcgacag tacgaggcgg acgaactctt tgccacactt gatgccacga ccaagcagat
    49081 aaacttggct gacaagttca acgtgacctt gaccgatacg gttggtttca ttcaggacct
    49141 gccgaccgag ttgatttcag ccttcaagtc aactttggag gagtccatga atgtggacct
    49201 cttgctccat gtcatcgacg cctctgaccc caatcacagt gagcaggagc aggtggtctt
    49261 ggacattctt aaggacttgg atatgctgga cattccacgt ctagctctct acaacaagtt
    49321 ggacaagacc gatgacagct ttactcctag tcagtttcct catgtcatgc tgtccgctaa
    49381 ggatgaaaat gccaaaggcc atattcagat gatggtcttg gccaagataa agaccatgtt
    49441 tgaacgattt gaggtcaggg tgccacttgc tgaatcttat aaattgcatg atttggcaac
    49501 tctggcactg attgaaaatc ggacctacga agaggatgtg gaagtggtat caggctatat
    49561 cgcttccagc aataaatgga agttggaaga attttatgac ggattatctt gatttggcaa
    49621 tcaaatacgg tggctttact agtctggaca aggtctatct ggctaagaaa ttagctgatt
    49681 tgactgacca acaaaaacta gattttatca cgccaccgcc ttcggttatc aatgcctatt
    49741 ttgcggaaat ctaccagaaa caaggagcag aagaggcgac cgcctactat ctcaccctat
    49801 ctcagcagct gagccttttt ccaaaagagc ccagctttga agaagacaag ccctttgtcc
    49861 gcctgaattt atcaggtaag tctttcggat ttgcctatgt gtcggcggac ggtctggctc
    49921 aggttttttc ggaaggagcg gaggaagtga cggatagctt gctctttgaa attgcccaag
    49981 tctttcccca ctatgttgtc tttgtggagg agggcaagat tttcatgaaa gccaatccct
    50041 ttaaggacgc cgaattaaag gaagttgaaa cagactacct tttgaccaaa gtggagacga
    50101 cagaaggttt ggtcaagatt tcaggcttta atcaggaaga agtgctggaa gcagcggaag
    50161 gtttttctgg tcagtattac tatgtctggt cgggtcgctc tgcaatttta tatataaaac
    50221 attagaaagt aaacaatgca aattcaattt ttaggtacgg gggctggtca gccctccaag
    50281 gctcgaaatg tatccagttt ggccttgaaa ctcttggatg aaatcaatca ggtttggtta
    50341 tttgactgtg gcgaaggaac tcaaaatcaa attttggaaa cggcgattcg tccacgtaaa
    50401 gttgcaaaaa tctttatcac tcacctgcac ggagaccata tttttggtct gccaggtttt
    50461 ttatccagtc gttctttcca gtcaagtgag gagcagacgg atattgatat ttacggtcct
    50521 gttggcatcc gttcctttgt cttggcaagt cttaaagtat cagggacacg cctaccttat
    50581 cgcattcatt ttcatgagtt tgatgttgat acggtaggtc aggtcctaga aacggacaaa
    50641 ttcacggtat tcgctgaaaa gttggaccat accattcctt gtgtcggcta tcgtgtcatc
    50701 caaaaagatt tggaagggac attggacgca gaggctctgc gcgcggcagg tgtaccattt
    50761 ggtcccctct ttggtaaaat caaaaacggt caaaacgtga cgcttgaaga tgggactgaa
    50821 attatcgcga gtgactatat ttctcctcct cgacctggta aggtagtgac cattcttggt
    50881 gatacgcgca agtgtcatgc cagtgtgcgc ttggctgtta atgctgatgt gctggtgcat
    50941 gaggcgactt acggaaaagg cgatgagaag attgctcgca agcacgggca ttcgaccaat
    51001 atggaagccg ctcaggttgc taaggatgct ggagccaagc agctcttgct taatcatatc
    51061 agtccacgct ttttgtccaa agatattagt caattacgga aagatgcaag tactattttc
    51121 gagcaggttc atattgtcaa ggatttagag gaaattgagc tatgagaacc attctaatca
    51181 caggtgcctc aggtggcttg gtacaggaaa tggtgccctt gctgaaagat gattttttga
    51241 ttttactagg tcgtgatgtg gcaaaaattg agcagctcta tgcttaccat gaaaaaaagg
    51301 ctgtctttga tgtagacatc cgagatgaaa tagctctgac ggcatttttc gatgaactgg
    51361 atagtcagtt tgggcagatt gatattttag tcaataatgc tggctatgcc atttatgatg
    51421 attttgagaa tttttccagc cagcaggtgc aggctatgtt tgacatcaat acttttgcac
    51481 tgatgaccat atgccgttta gtaggtaaac ggatgaaggc cagacggagc gggcagatga
    51541 tcaatatcat ttccatgtca ggcttgattg cttcaagcaa gtcatcggtt tattcggcga
    51601 ccaagtttgc agctatggga ttttccaata ctattcgttt ggagttggct ccctacggtg
    51661 tgacagttac tacggtcaac ccaggtccaa tcgcaaccag ctttttcgac caagcagatc
    51721 cagatggtac ttatcaagaa agtgtcaagg ctttcttgct gcaaccagac tatgttgcca
    51781 agaagattgt ttcagctatg gggacgaaga aacgagacat caatctgcct tggtcactag
    51841 cagctgctca taagctatat actctttttc cgagactggc tgattatctg gccagtacgg
    51901 tctttaattt gaaataaaga aaagtgaaca cataatatga cctagatgga ttaatgccat
    51961 tctaggtttt tttgatctaa tcggttgaca ttttttgact acaagtgtaa actataattg
    52021 taaatcgatt acaaatgtag acagaaatag gagttatctt atgaactatt caaaagaaaa
    52081 taagcaggaa caccaacata tgatgcattc tgaggaagtt ggtcagacca gccatcattc
    52141 tcatcagcag gagcatcctc atgaagaggg ggttcacgcc aatcatcatt ctgaccatca
    52201 cgtccatcat catgtagggg gctctgacgt cagtcatcat tctcatcata ctcatgatgc
    52261 tcatcagcat caccaagggc atgaccatga catgatggag catggtgggc acatgatgca
    52321 catgggggat atgaatacaa aactcaaagt cgcagtggca gtcatgattc ccctacttgc
    52381 catttctcca attgcaggtt tcactctttt acgttttccg ggtgttgaac ttgtccagct
    52441 gatattaggt tctattatct tcttctactc aggaacacct ttctttaacg gagctagagg
    52501 ggagttgcaa gctaaaaaac ctgcaatgat gaccctgatt tccatgggga ttattgtttc
    52561 ctatctttac tccgtttatg caacaatttt agcgctattg ggacaagaaa gcatgaactt
    52621 ttggtttgag ttgtctacgc tgattgtcat tatgctgatt gggcatatca ttgagatgaa
    52681 ggcggttatg ggagcaggcg atgccctgaa agacttggcc tctctcattc cgaaaaaagc
    52741 ccatctcaag gatgggacag atgttgcggt agaggacttg cagattgggg atttcctctt
    52801 agtcaaggaa aatgaaaaaa ttccggctga cggtaagatt ttgagtgttg ctcatattga
    52861 tgaatccatg attactgggg aatctcgagc tgtcaaaaaa gaggcggggg ataggg
//
LOCUS       DASFQS010000006        51139 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.006, whole genome shotgun sequence.
ACCESSION   DASFQS010000006 DASFQS010000000
VERSION     DASFQS010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 51139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 51139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..51139
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.006"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..172
                     /locus_tag="U1041_000300"
     CDS             <1..172
                     /locus_tag="U1041_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4767444.1"
                     /translation="KPVAPKPQAPVAPTTAKAGAAQLPNTGEASSSATVLGAGMLIAA
                     LALAGKRRRNED"
     gene            337..3603
                     /gene="rexB"
                     /locus_tag="U1041_000301"
     CDS             337..3603
                     /gene="rexB"
                     /locus_tag="U1041_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HEM4767445.1"
                     /translation="MKLVYTDIRNPLTQYLTDSAAEFAKESKRVFYIAPNSLSFEMER
                     KVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQPLDDVGLAMIFFRVLSQFEDGDL
                     KVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMESPDKQADLVKIFLSVTEILFK
                     EGFEHQSKLAQLTGLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILI
                     GVYASKKAVQATYTEGNVYQANVDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEA
                     YYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQGARYKDILLLLGDV
                     DSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSG
                     LYASISQKEMDLFESYILFADMKGQAAFSRTFSVNGRADYDAEVIKEKRLVYDLAVLE
                     PLRAKIMEPLNQLFKAGPQSGTALLEKFMAFLEAIELPKNMEKMSRNLSEVEQEKEEQ
                     VWKSFTHILENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVKSYDLIE
                     PHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHA
                     AMMSLLNSATKQLVISTPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSPQDIGH
                     YKSLLSRLIESERPSLEHEEWEGQTAFWTVLVRHLKKKLESQGIEIPTITGEITSKQL
                     AADTLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLH
                     RIFERVVMDQSELDFDQKVDKAILHTRDEAEFAMFYNQDADARYTEEVLDKIARSSAT
                     ILRDNDLVEIDGQEKSFRQDKALVFDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKS
                     SDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQDPIIKLKDTKNLE
                     QLEGAANTSLAYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAMDI
                     LAGRFAINPYTKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGQD
                     "
     gene            3603..7256
                     /gene="addA"
                     /locus_tag="U1041_000302"
     CDS             3603..7256
                     /gene="addA"
                     /locus_tag="U1041_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HEM4767446.1"
                     /translation="MAFEQFLSTEEIKAVQRVEANSDKQQKRTPEQIEAIYTHGQNVL
                     VSASAGSGKTFVMVQRILDKLKRGVGIDQLFISTFTVKAAGELKERIEKNLNETIAET
                     TDMELRRHLSAQLADLTKADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLK
                     KEVFDQLFADYLEQDENGAFHKLVCNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWL
                     KEQAVQADLYSQERIELILEQGFKEKVLDKLYQAADFFRYHVEWGRNDFGSAKYFANV
                     EEVLDLLTGLDSLDQKDLMERVERILLINDQSRGKGLTNANRPKDEHLIAFKEEYNAG
                     KSQIISGLRDLGQEVYELTLLKDYQIQALPMLILLRDFVLDFSQAYLDVKIKEAAFEF
                     GDIGHFAIRILEENVDIRQFFQEKYHEVMVDEYQDNNHSQERMLDLLSNGHNRFMVGD
                     IKQSIYRFRQADPMIFQEKFELYQANPQAGKLILLKENFRSQIEVLEATNAIFTRLMD
                     RQVGEIKYDKTHSLVAGSPGQKIAQPKHEMEYLIYDQQDSAHSSRDAEEETPLTAGEI
                     EVVAKEIIRLHNEEGADFKDITLLVQKRTHNDLIMSIFEKHGIPIVADGGAASYLQSL
                     EVMIMLDTLRVINNPLNDYALVALLKSPMFRFDEDELTRISLQAGTGFLYQKMEIAHQ
                     TNGQHPELMSGELKKKIKDFLSILENWRAYAKLHSIYDLIWKIFNEKFYYDYVGALPN
                     GSKRQANLYALGLRANQFEKTGYKGLSRFIAMIDRALANDKDLADVQEFLPQNAVQLM
                     TIHKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQV
                     RVLMNTLPYQNNLQELKIANLSEQMRLLYVALTRAEKKLYLVGKGNADKLAEKYDGKK
                     EDGVLAQSTRESMATFQDWILAIDEAFSGDDLHFKKVFVTDEDLTEEKIGKLTLKSKL
                     EDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIELPSLRTPSQIKKLYEPVLEQEG
                     MEVMEKYQPKRTFNLPDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDTVREALEAV
                     HAEQAVKDKINVQMILDFFDTDLGREILANTDKLHREAPFASLQTDPVSQENFVLRGI
                     IDGYLLYDDHIVLFDYKTDKYDQPIQLSQRYQAQMQLYAEALKKAYKIDRVDCHLILL
                     GGERIEVVEVKVN"
     gene            complement(7267..7911)
                     /gene="plsY"
                     /locus_tag="U1041_000303"
     CDS             complement(7267..7911)
                     /gene="plsY"
                     /locus_tag="U1041_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEM4767447.1"
                     /translation="MLVNLILLFIAYLLGSIPSGLWIGQAFFNINIREHGSGNTGTTN
                     TFRILGPKAGTIVFVIDFLKGTLAALLPLIFHAQGISPIVFGLMAVLGHTFPIFAKFK
                     GGKAVATSAGMLLGVAPAFCLYLVIIFVTSLYLTSMVSFSSVLAAALAILGALLFPAI
                     GIILPSYDWLFTVIIVFLDSFVIIRHKENIQRILKKEENLVPFGLNLTKQKKRV"
     gene            8054..10003
                     /gene="parE"
                     /locus_tag="U1041_000304"
     CDS             8054..10003
                     /gene="parE"
                     /locus_tag="U1041_000304"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEM4767448.1"
                     /translation="MTKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGNGLHHM
                     VWEIVDNAVDEALSGFGDRIDVSINKDGSLSVSDRGRGMPVGMHATGKPTVEVIFTVL
                     HAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFEQGGKPVTTLE
                     KIGTAPKSKTGTKVTFMPDDTIFSTTDFKFNTIAERLKESAFLLKQVTMTLTDERTGE
                     QEEYHYENGVQDFVSYLNEDKETLTPVLYFEGEDAGFQVQVAMQYNDGYSDNILSFVN
                     NVRTKDGGTHETGLKLAITKAMNDYARKTNLLKEKDKNLEGSDYREGLSAVLSILVPE
                     EHLQFEGQTKDKLGSPLARPVVDGIVSDKLTFFLLENGELASNLVRKAIKARDAREAA
                     RKARDESRNGKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQ
                     AILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGSDFTIEDVNYDKIIIMTDAD
                     TDGAHIQTLLLTFFYRYMRPLVEAGRVYIALPPLYKMSKGKGKTEKIAYAWSDGELED
                     LRKDFGKGFILQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVSVLMGD
                     KVEPRRKWIEDNVKFTLEEATAFTK"
     gene            10026..10631
                     /locus_tag="U1041_000305"
     CDS             10026..10631
                     /locus_tag="U1041_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016176895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4767449.1"
                     /translation="MVLENKLGIKDSLELAKMEEKVSKEKAKRLFEEKLVANKQAGTF
                     ETLAFIHRFLFEDIYDFAGKVREVNIAKGGFRFAPLMYLHTSLATIENMPQRTFAEII
                     EKYVEMNVAHPFREGNGRSMRLWLDHLLKAELGQVIDWSLVDKEDYLLAMERSPIRDI
                     EIKYILKNALTDEIDSRELYMKGIDHSYYYEGYNLYRTEDL"
     gene            10664..11170
                     /locus_tag="U1041_000306"
     CDS             10664..11170
                     /locus_tag="U1041_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HEM4767450.1"
                     /translation="MPITIPKLPNRLTQTAKNWADKQKEQLAQLDLKEKFDQALETWK
                     SSKTRERAEALLSDQGKLEHFLHSTERKLSRMPFGGDKFAAIPGLISMVRSYIRRDYN
                     KLPKGTILAIIGALIYFFSPIDALPDFILGAGLLDDSFVLNACLKLVKSDLDDFRNWQ
                     ASQWKAEE"
     gene            11211..13664
                     /gene="parC"
                     /locus_tag="U1041_000307"
     CDS             11211..13664
                     /gene="parC"
                     /locus_tag="U1041_000307"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEM4767451.1"
                     /translation="MSNIQNMSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRI
                     LYSMNKDGNTFDKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMH
                     GNNGSMDGDPPAAMRYTEARLSEMAGYLLADIEKKTVPFAWNFDDTEKEPTVLPAAFP
                     NLLVNGATGISAGYATDIPPHNLAEVIDAVVYMIDHPTAKLEKLMEFLPGPDFPTGAI
                     IQGAEEIKKAYETGKGRVVVRSRCDIEQLKAGKKQIVITEIPYEVNKAVLVKKIDDVR
                     VNNKVPGIAEVRDESDRTGLRIAIELKKDSDEQTILNYLYKYTDLQINYNFNMVAIDN
                     FTPRQVGLQKILSSYIAHRREIIIARSKFDKEKAEKRLHIVEGLIRVISILDEVIALI
                     RASENKADAKENLKISYDFSEEQAEAIVTLQLYRLTNTDIVTLENEEAALSEQIQTLA
                     AIIGDERTMFNLMKKELREVKKQFGNPRLSELQDQAETIEIDTASLIVEEETFVSVTK
                     AGYIKRTSPRSFNASTLEEMGKRDDDQLIFLQNAKTTQHLLLFTNLGNVIYRPVHELT
                     DIRWKDIGEHLSQTLMNFDTNEEVIFAELVENFEEGTYFAVTKYGQIKRVERKEFTPW
                     RTYKSKSTKYAKLKDAEDVVITVSPVVLDDIMLITEKGYALRFNIEEVPIIGAKAAGV
                     KAVNLKDGDVVAAAFISNTSSVYLLTQRGSLKRMATEEIPVTSRAKRGLQVLRELKAK
                     PHRVFAAGPVLTDQGDFDLFSTANEDETTSQILHVQSKTGKLYDVDVTQLSLSERTSN
                     GSFISETISDEEVLVAFIL"
     gene            13777..14184
                     /locus_tag="U1041_000308"
     CDS             13777..14184
                     /locus_tag="U1041_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004261493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HEM4767452.1"
                     /translation="MTQQFSKAEANEAIKKNYRKAEKILQNKDDFERFLQSVEKKLHH
                     VPVVGSDLAVVPAMISLVRHFAEGRYRHVPIGTILAIVSSLIYFVSPVDVIPDVLPVV
                     GVVDDALVIKVCLEMVKSDLETYDEWRIRKGLL"
     gene            14270..15292
                     /locus_tag="U1041_000309"
     CDS             14270..15292
                     /locus_tag="U1041_000309"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEM4767453.1"
                     /translation="MTVNIDWENLGFAYMKLPYRFIAHFKNGQWNEGQLTEDAELHIS
                     ESSPALHYGQQAFEGLKAYRTKEGKLQLFRPDQNAERLQRTADRLLMEPVPTELFIKA
                     CKEVVKANADYVPPYGTGGTLYLRPLLIGVGDIIGVKPAEEYIFTVFAMPVGNYFKGG
                     LAPTNFLIQDKYDRAAPNGTGAAKVGGNYAASLLPGQYAKKQGFSDVIYLDPATHTKI
                     EEVGSANFFGITADNEFVTPISPSILPSITKYSLLYLAEHRLGMKAVEREVLVEELDQ
                     FVEAGACGTAAVISPIGGIQIVDKLHVFHSETEVGPVTRKLYEELTGIQFGDIEAPEG
                     WIIEVD"
     gene            15359..15592
                     /locus_tag="U1041_000310"
     CDS             15359..15592
                     /locus_tag="U1041_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2969 domain-containing protein"
                     /protein_id="HEM4767454.1"
                     /translation="MSKKDKKIEIQIEDSKVLVNREEFPGYRLVIGKKVIGEIAELAE
                     NNFAVIKNGNTESFYKKLEKAVGNIIENYNLSH"
     gene            15644..15724
                     /locus_tag="U1041_000311"
     tRNA            15644..15724
                     /locus_tag="U1041_000311"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15678..15680,aa:Tyr,seq:gta)
     gene            16000..16071
                     /locus_tag="U1041_000312"
     tRNA            16000..16071
                     /locus_tag="U1041_000312"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16032..16034,aa:Gln,seq:ttg)
     gene            16195..17400
                     /gene="rpsA"
                     /locus_tag="U1041_000313"
     CDS             16195..17400
                     /gene="rpsA"
                     /locus_tag="U1041_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEM4767455.1"
                     /translation="MNEFEDLLNSVSEVTPGDVVTAEVLTVDAGQANVAISGTGVEGV
                     LTLRELTNDRDADINDLVKVGETLELLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKL
                     VGREEEVVTVKVTRAVKGGLAVEFEGLRGFIPASMIDSRFTRNTERFVGQEFDAKIKE
                     VDPAENRFILSRRDVVEAESAAARAEVFGKLAVGEVVTGKVARITSFGAFIDLGGVDG
                     LVHLTELSHERNVSPKSAVTVGEEVEVKVLAIDEVEGRVSLSLKATQPGPWDGVEQKL
                     AAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHKRVENPKDALSVGQEVTVKVL
                     EVNAADERVSLSIKALEERPAAAEGEEKAEKRAPRPRRQKREEKRDYELPETQSGFSM
                     ADLFGDIEL"
     gene            17438..17509
                     /locus_tag="U1041_000314"
     tRNA            17438..17509
                     /locus_tag="U1041_000314"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17471..17473,aa:Arg,seq:ccg)
     gene            17571..18599
                     /locus_tag="U1041_000315"
     CDS             17571..18599
                     /locus_tag="U1041_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016503195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid lyase"
                     /protein_id="HEM4767456.1"
                     /translation="MLHFENDYNKGAHPALLEALVASNQEGLSGYGTDKYTESAIEKI
                     RLATDCPHAQVTFLAGGTQTNQIVISSMLASYEGVIAADTGHIAVHEAGAIEFTGHKV
                     LVLPHTDGKLVASEVENYISDFYADANHAHMVHPGMVYISHPTEYGTLYSKTELEDLS
                     KVCQQHNIPLFLDGARLGYGLAARETDLDLKTIAELIDVFYIGGTKLGALMGEALVFT
                     KNNQPKNFVSIVKHHGALLAKGRVTGVQFDCLFTDDLYLKLGRHAIAMAEQLTQILEE
                     KGFQFYLKSPTNQQFVIVKNEELTRLTEVGIAYGFWEKYDDSHSIIRFATSWSTSQAD
                     IDELINIL"
     gene            complement(18618..19001)
                     /locus_tag="U1041_000316"
     CDS             complement(18618..19001)
                     /locus_tag="U1041_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767457.1"
                     /translation="MKYVILKTPIFVWLLIFALIQIFALSSFLPEPFDTRSLLPMGVL
                     TSCSIRVSSEVKDQDGQYAPFKYLWWVILGWTVIGILFSITINAPLELHIALIVHAIA
                     GGIGYRLIERYAVYRYHYLQTKKKG"
     gene            complement(19061..19474)
                     /locus_tag="U1041_000317"
     CDS             complement(19061..19474)
                     /locus_tag="U1041_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767458.1"
                     /translation="MNTRKNTNKKPAGLTNFQKYLTFIGSILGIITACITIYTFTAKP
                     VTSSTSPSTTISSSSATSPSQSSSDNPLTEVQDLTSSSSETTSSTQTETCSSVESTAS
                     SSSTETSATQASETRTETSTDTEVTSGTSETTSNQ"
     gene            19587..20729
                     /locus_tag="U1041_000318"
     CDS             19587..20729
                     /locus_tag="U1041_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018543459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM4767459.1"
                     /translation="MIYFDNAATTQVYPEVLKTYTEVATKIWGNPSSLHSLGSQATRI
                     LEASRKQIAELLGKDSKEIFFTSGGTEGDNWVIKGVAFEKAHLGKHIIVSAIEHPAVK
                     ESALWLKTQGFEVDLAPVNAQGFVDVSALESLIRPDTTLVSIMAVNNEIGAIQPIQEI
                     SQLLADKPTISFHVDAVQAIGKVPTERYLTDRVDFASFSGHKFHSVRGVGFVYVKAGK
                     KIAPLLTGGGQESDKRSTTENVAGIAATAKALRLTLDKAVDSQKRLAAMKQILVDELG
                     KYADVTVFSGLEDFVPSIVTFGIKNIRGEVIVHAFEDHQIYISTTSACSSKAGKPAGT
                     LIAMGVPQKLAQTAVRISLDDDNDMGQIEQFLTIFKQIYQNTQKVR"
     gene            20731..21948
                     /gene="thiI"
                     /locus_tag="U1041_000319"
     CDS             20731..21948
                     /gene="thiI"
                     /locus_tag="U1041_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HEM4767460.1"
                     /translation="MNYSEIMIRYGELSTKGKNKMRFVNKLRNNIKHVLSVYPEVTVY
                     FDRDRGHVYLNGADYQEVSASLKKIFGIQNFAPSYKIEKSVPALKEAVVEIMQSIYKE
                     GMTFKIAARRSDHSFELDSRDLNQVLGDAVFTAIPNVQVQMKSPDITLRVEIRPDAAY
                     ISHEEIKGAGGLPVGTSGKGTLMLSGGIDSPVAGYLALKRGVEIEALHFASPPYTSPG
                     ALKKAHDLTRKLTAFGGNITFIEVPFTEIQEEIKEKAPEAYLMTLTRRFMMRITDRVR
                     EERGAMVIINGESLGQVASQTLESMQAINAVTNTPVIRPVVTMDKLEIIDIAQEIDTF
                     DISIQPFEDCCTIFAPDRPKTNPKIKNVEQYEARMDVEALVERAVAGIIVTEITPKEE
                     VKDEVDSLIEDLL"
     gene            22071..23399
                     /gene="brnQ"
                     /locus_tag="U1041_000320"
     CDS             22071..23399
                     /gene="brnQ"
                     /locus_tag="U1041_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HEM4767461.1"
                     /translation="MKKGALTGLLLFGMFFGAGNLIFPPALGVLSGENFWPAILGFVV
                     SGVGIAVIALIVGTLNPKGYVHEISRKISPTFATIYLVALYLAIGPFFAIPRTATTSF
                     EIGIAPLLGDANLGLWLFGFTALYFVAAYLIALNPSQILNSIGRILTPVFAILIVILV
                     VLGIVKYGSTNPLPAADAYSAGRAFGTGFIEGYNTLDALASIAFSVVAVNTLKQLGFS
                     SKKEYVSTIWSVGFVVALAFSALYVGLAFLGNHFPVPADVLASKEIHKGVYVLSQATQ
                     AIFGPSAQIFLAAMVIVTCFTTTVGLIVSSGEFFAERFSRFNYKVYATLFTLIGFGIA
                     NLGLSKIIAFSIPVLLILYPITICIILITIVNKFVPLSTYGMQLTVGVVTALSLVEVL
                     AGQFNWTVVSKIISALPLAEQSLAWLLPALVGIVLSLFLPNKQESEVFEM"
     misc_feature    23466..23641
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            23677..23991
                     /gene="rplU"
                     /locus_tag="U1041_000321"
     CDS             23677..23991
                     /gene="rplU"
                     /locus_tag="U1041_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEM4767462.1"
                     /translation="MSTYAIIKTGGKQVKVEVGQAIYVEKLNVEAGQEVTFEEVVLVG
                     GEKTVVGTPLVAGATVVGTVEKQGKQKKVVTFKYKPKKGSHRKQGHRQPYTKVVINAI
                     NA"
     gene            24038..24331
                     /gene="rpmA"
                     /locus_tag="U1041_000322"
     CDS             24038..24331
                     /gene="rpmA"
                     /locus_tag="U1041_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEM4767463.1"
                     /translation="MLNLNLANLQFMAHKKGGGSTSNGRDSQAKRLGAKAADGQTVSG
                     GSILYRQRGTKIYPGANVGRGGDDTLYAKVEGVVRFERKGRDKKQVSVYPIAK"
     gene            24386..24799
                     /locus_tag="U1041_000323"
     CDS             24386..24799
                     /locus_tag="U1041_000323"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767464.1"
                     /translation="MNDSNNVFVKDFYLELVTKKEQCESKISELEIEIGKLKEKIALY
                     NNQLTKHSERTVFKPDYSIEENSELWEIRTDIEKLKTSTHDSSKRTEEFTRLLLEEEN
                     YQKQKESYFEDENKKRKLNMKNIFSKKTYKDSAKK"
     gene            24826..25221
                     /locus_tag="U1041_000324"
     CDS             24826..25221
                     /locus_tag="U1041_000324"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767465.1"
                     /translation="MAKILDILLFFIILITLLVSLITIFIEIPTQIQTTIDILNIVMF
                     PCSFVILLIEFYYKFNKEKFFKYYFNLLFGIAILICICLTIALLVLADKFYANEKTQE
                     VIAILTLLVSVPQRWYGQVFETKVKSNMR"
     gene            25226..25885
                     /locus_tag="U1041_000325"
     CDS             25226..25885
                     /locus_tag="U1041_000325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767466.1"
                     /translation="MSEIKNRVSEILSKDGMIKNIMFECVRELENFDSEQQIEFLELL
                     FTNFGKFVIDKEVQSGEFVTEEQTEAYFSSSLDKFVVGIYQAILKRAIKNNFPVTTFY
                     REIHELILSSKLLTEDYQKALALTQLTQQKEMPYLNVDFSVLQVTKDFSEFNQENPDL
                     VEIFDYIFRLNLEYKTEYSSLLLNELEKFSTKEDRVICLAKILDVHKFQIEKEFEQAE
                     E"
     gene            25898..26812
                     /locus_tag="U1041_000326"
     CDS             25898..26812
                     /locus_tag="U1041_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM4767467.1"
                     /translation="MNIQQLRYVVAIANSGTFREAAEKMYVSQPSLSISIRDLEKELG
                     FQIFSRTSSGTFLTQKGMEFYEKAQALVKGFDQFEHLYLQPEEGEKTFSISSQHYDFL
                     PPLITEFSRSHPQYPHFRIFESTTVQILDEVAQGYSELGIIYLNERNTKGIMQKLDKL
                     HLQAVDLSAFQTHIYLREDHPLTKKAEIDPADLVGLPTVRFTQEKEAYLYYSENLIDT
                     SDSSVVFDVTDRATLNGILERTDAYATGSGYLDDESVNGITVIPLKGKVDNRMVYVKR
                     ANDELSSCAKDFIETMQAYFDKKKDENA"
     gene            26805..27269
                     /locus_tag="U1041_000327"
     CDS             26805..27269
                     /locus_tag="U1041_000327"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEM4767468.1"
                     /translation="MRKIGFPFLMVVLIGLDQFVKAWTVANIELDTVTEFIPGLMSLA
                     YLRNYGAAWSILQNQQWFFTIVTIAAVTGLIWYYVKQIKGNLWTLFSLALMIAGALGN
                     FIDRIRLGYVVDMFHLDFISFPVFNVADMCLNVGVGILLICIMKEESNGSKS"
     gene            27253..28146
                     /locus_tag="U1041_000328"
     CDS             27253..28146
                     /locus_tag="U1041_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM4767469.1"
                     /translation="MEVRVEVGGIRLDKALSDLTDLSRSVANEQIKAGQVLVNGQPKK
                     AKYSVQVGDVLTYQIPEVEEIDYVAEDIPLEIVFQDEDVAVVNKPQGMVVHPSAGHTS
                     GTLVNALLYHVKDLSGINGVLRPGIVHRIDKDTSGLLMIAKNDDAHTKLAAELKDKKS
                     LRKYWAIVHGNLPNDRGVIEAPIGRSEKDRKKQAVTAKGKEAVTRFQVLERFGDYTLV
                     ELTLETGRTHQIRVHMAYIGHPVAGDEAYGPRKTLKGHGQFLHARTLGFTHPRTGEVV
                     EFTAEAPAIFQEALEKLRKAE"
     gene            28227..28565
                     /locus_tag="U1041_000329"
     CDS             28227..28565
                     /locus_tag="U1041_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEM4767470.1"
                     /translation="METLPNCPKCNSEYVYEDGALLVCPECAYEWNPADVAEEESGPV
                     AIDANGNRLADGDTVTLIKDLKVKGAPKDLKQGTRVKSIRIVEGDHNIDCKIDGFGAM
                     KLKSEFVKKI"
     gene            28613..29260
                     /locus_tag="U1041_000330"
     CDS             28613..29260
                     /locus_tag="U1041_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pr6Pr family membrane protein"
                     /protein_id="HEM4767471.1"
                     /translation="MKHQSILFYSRCLLAILAITGTALEIIKYGIGMLMYYTVQSNLL
                     VSLFAVYMVYAMSKSVDLQTSRFLRIKAAVTMSIMITCVVYHFMLAPLADDFWRLENL
                     LCHYIVPLYFLLDTLIVDRQQQYKWFDPIWWTLLPVLYMIFGLVNGLFIKIPIPDAKD
                     SPFAYFFLNVPKYGWTYVLTYAGVIFVAYLVCGFLLAGLKSINLKTSLSFGKNSQ"
     gene            29466..29987
                     /gene="pyrR"
                     /locus_tag="U1041_000331"
     CDS             29466..29987
                     /gene="pyrR"
                     /locus_tag="U1041_000331"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEM4767472.1"
                     /translation="MKTKEIVDDMTMKRAITRITYEIIERNKNLENIVLAGIKTRGVF
                     IAKRIQERLKQLEGIDVPLGELDTKPFRDDVKVEEDTTSMTADVNDRDVILVDDVLYT
                     GRTIRAAIDNIVSLGRPARVSLAVLVDRGHRELPIRADYVGKNIPTSRSEEIIVHMAE
                     IDGQDSVLLVEGA"
     gene            30044..30967
                     /locus_tag="U1041_000332"
     CDS             30044..30967
                     /locus_tag="U1041_000332"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002889464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEM4767473.1"
                     /translation="MTITNGKVSLKHLVTMETLSNEEVLGLIQRGIAFKRGEKVELDR
                     KYYASNLFFEDSTRTHKSFEMAELRLDMGMIDFDARTSSVNKGETLYDTILTMSALGV
                     DICVIRHSEVDYYKQLIDSPTIQTSIVNGGDGSGQHPSQSLLDLMTIYEEFGTFEGLK
                     IAIAGDITHSRVAKSNMQILKRLGAEIFFAGPEEWYAEEFDVYGQHLNIDDIVETVDV
                     LMLLRVQHERHDGDGGFSKETYNRLHGLTEERYKRLKDSAIVMHPAPVNRDVEIDDSL
                     VEAPKSRIVRQMQNGVFVRMAILEAIVNGKA"
     gene            31518..34697
                     /gene="carB"
                     /locus_tag="U1041_000333"
     CDS             31518..34697
                     /gene="carB"
                     /locus_tag="U1041_000333"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEM4767474.1"
                     /translation="MPKRTDIKKIMVIGSGPIIIGQAAEFDYAGTQACLALKEEGYSV
                     VLVNSNPATIMTDKEIADKVYIEPITLEFVTRILRKERPDALLPTLGGQTGLNMAMEL
                     SKAGILDELGVELLGTKLSAIDQAEDRDLFKQLMEDLNQPIPESTIVTTVEEALEFAA
                     EIGYPVIVRPAFTLGGTGGGMCANEEELREIAENGLKLSPVTQCLIERSIAGFKEIEY
                     EVMRDAADNALVVCNMENFDPVGIHTGDSIVFAPTQTLSDIENQMLRDASLSIIRALK
                     IEGGCNVQLALDPHSFKYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEM
                     VNPVTGTTYAMFEPALDYVVAKIPRFPFDKFEKGERRLGTQMKATGEVMAIGRNIEES
                     LLKACRSLEIGVYHNEMPELSQVTDDQLVEKIVKAQDDRLFYLSEALRRGYTVEELAQ
                     LTKIDLFFLDKLLHILEIEQELATNFDNIDLLKKAKKYGFADRKIAELWGRTESYIRQ
                     LRTEYKIVPVYKMVDTCAAEFESATPYFYSTYEWENESIRSEKESVLVLGSGPIRIGQ
                     GVEFDYATVHSVKAIQAAGYEAIIMNSNPETVSTDFSVSDKLYFEPLTLEDVLNVIDL
                     EKPKGVIVQFGGQTAINLAEPLAKAGIPILGTQVADLDRAEDRDLFEKALKDLGIPQP
                     PGQTATNEEEALEAARKIGFPVLVRPSYVLGGRAMEIVENEEDLRSYMRTAVKASPEH
                     PVLVDSYIVGRECEVDAISDGKDVLIPGIMEHIERAGVHSGDSMAVYPPQTLSKEVQA
                     TIADYTKRLAIGLNCIGMMNIQFVIKDETVYVIEVNPRASRTVPFLSKVTDIPMAQVA
                     TKLILGQSLAELGYQDGLYPESKQVHVKAPVFSFTKLAKVDSLLGPEMKSTGEIMGSD
                     LTLEKALYKAFEASYQHLSEFGNVVFTIADEDKEEALGLAQRFHELGYGLLATAGTAA
                     YLAENGLSVTTVGKLGDAACHDIPSLVRAGKIQAIINTVGKKRVADGDGQVIRSSAIE
                     GGIPLFTALDTAEAMIKVLKSRSFMTQAI"
     gene            34755..35516
                     /locus_tag="U1041_000334"
     CDS             34755..35516
                     /locus_tag="U1041_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4767475.1"
                     /translation="MKMIVTTSLGMDEGLVYRARRIASELGIEYKERKKQSVGKMLGT
                     YEAILVLYKDKLILEQRGGQVLFFHPDTAILRIKSVRDPLLELIGPDKHTVLDCTMGL
                     ASDSIVLASAGHQVTALESSLLIHFMVSRGLKEFDSGNEAVNQAMRSIQTIWTDSLTY
                     LQSQADQSADVIYADPMFSQEITESDNLDGLKPFANYSALSEEFLVEAKRVARRKIII
                     KAHFRDQAFEKFGFRRHVRPNQKFHYGEIILEEEV"
     gene            35513..36160
                     /gene="pcp"
                     /locus_tag="U1041_000335"
     CDS             35513..36160
                     /gene="pcp"
                     /locus_tag="U1041_000335"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HEM4767476.1"
                     /translation="MKIIVTGFDPFGGEPINPALETIKSLPKTIAGAEIILVEIPTVF
                     DKAADVLEEKMAEHLPDAVLCIGQAGGRVDLTPERIAINQDDARIPDNEGQQPIDRTI
                     REDGQPAYFSTLPIKAMVEAIHRIGLPASVSNTAGTFVCNHLMYQALYLAEKQFPKTK
                     AGFLHIPFLPEQVVDKPGLASMSLNDIVRGVEVAIGAIVEYRDKEDIKKGGGSTH"
     gene            36160..36468
                     /locus_tag="U1041_000336"
     CDS             36160..36468
                     /locus_tag="U1041_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEM4767477.1"
                     /translation="MKNIMEARKRVEEMEKTFNRQLELNQSLSDSMAQLNQEQSTYLQ
                     LLDYYQSQTYMEDLELSNKGYFNGIPCGVLSEDGVYNLLFDRTNLASQLRELADMLEQ
                     "
     gene            36593..36865
                     /gene="rpsP"
                     /locus_tag="U1041_000337"
     CDS             36593..36865
                     /gene="rpsP"
                     /locus_tag="U1041_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002884675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEM4767478.1"
                     /translation="MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLL
                     AENSVTLKEERVLEWLAKGAQPSDTVRSLLSNAGVLKKFHEQKFSK"
     gene            36887..37129
                     /locus_tag="U1041_000338"
     CDS             36887..37129
                     /locus_tag="U1041_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEM4767479.1"
                     /translation="MDMIENLIIAIVKPLISQPDSLTIKIVDTPEFLEYHLDLDKSDI
                     GRIIGKKGRTISAIRTIVYSVPTSDKKVRLVIDEKE"
     gene            37205..38941
                     /locus_tag="U1041_000339"
     CDS             37205..38941
                     /locus_tag="U1041_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002289665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767480.1"
                     /translation="MNLIWTYLKKYPKWIALDLLGAFLFIVVNLGLPTFLARMIDQGI
                     TKNNVDQLYFWAGMMGLIVLLGIVGRVTLAYAAGKLTTNIVKDIRNDLYEKIQDYSHH
                     EYEQIGVSSLVARMTNDAFVLMQFSEMVLKLGIITPLMMIASVIMTLVTSPSLAWTVA
                     VAMPFLVFVIFYVATKTRPLSEKQQKRLDTINQYVRENLMGLRVIRAFTREEFQEERF
                     ESVNEEYTDISKKLFNLTGLTEPLFVQIIIAMIVAIVWFALEPLKTGSLQIGDLVAFI
                     EYSFHALFSFLLFANLFNMYPRMSVSSQRIQEVLDMPISISKNEDGITETDTRGYLEF
                     ENVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRIL
                     VDGVDVRRYNLKALRSKIGFIPQKALLFTGTIAENLKYGKMDASLAELHDATDVAQAK
                     EFIESKEEKFDTHLAEGGSNLSGGQKQRLSIARAIVKQPDIYIFDDSFSALDYKTDAI
                     LRSRLKEVTENATVLIVAQRVGTIMDADQIIVLNEGEIVGRGTHNELMESNEIYREIA
                     NSQLNRQSLTEE"
     gene            38950..40719
                     /locus_tag="U1041_000340"
     CDS             38950..40719
                     /locus_tag="U1041_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767481.1"
                     /translation="MKNRSVFTRVWDYLRRYKSSVFLAVFLKTISAVMNALEPFVLGL
                     IITELTKNLLDIANGVEGAQINYSYIAIMLAIYALRALLYEIGAYGSNYFMTKAVQGA
                     TKELRQDLSHKINKIPVSYFDKHQYGDLLGRFTSDVETVSNALQQSFLQLVNAVLTLS
                     LAIFMCFWLDVSLALVVVTLVPVTYFGSKFVMGKSQPYFKQQADALGRLNGFVQENLT
                     GFNVLKLYGREEISTEEFRQITADLQEVGFKASFMSGLLMPLVHGFSNIAYVVVALLS
                     GLKVLAGTLTVGNMQAFVQYVWQISQPVQTLTQLAPQLQSAKSSLERIFSVLDELDEE
                     DANALELTESLTGQVSFEQVEFGYSEDKPLIRNFNLDVQPGEMVAIVGPTGAGKTTLI
                     NLLMRFYDVTSGAIKVDGQDIRNLSRQSYRSQFGMVLQDAWLYEGTIKENLRFGRLDA
                     TDEEIVVAAKAANVDHFIRTLPGGYNMEMNQESSNISQGQKQLLTIARALLADPAILI
                     LDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQIIEQGN
                     HESLLADKGFYYNLYQSQFSESK"
     gene            complement(40774..41697)
                     /locus_tag="U1041_000341"
     CDS             complement(40774..41697)
                     /locus_tag="U1041_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEM4767482.1"
                     /translation="MKHSRRARRSRTQKKQLVPMLLGIALLVVTLLSIFLIFLKQPSK
                     QQSDSKALTVETTTSSSVMTSESSEVQTEIIWEQQTEPIKLPILMYHAIHVMAPEEEA
                     NANLIVDPTTFESHLKALQDAGYYTLSPEEAYKVLTENVLPAGKKAVWLTFDDSLWDF
                     YSYAYPLLKQYQMKATNNVITGFTEYGQAGHLTLEQIKEMQTAGLSFQGHTVNHPDLE
                     YSSIEDQTNELTSSKAYLDSQLNQETIAIAYPGGRYSADTVALTEQAGYKLGVTTNNG
                     LASASDGLLTLNRVRILPTTTAEGLLSEISY"
     gene            41802..43088
                     /locus_tag="U1041_000342"
     CDS             41802..43088
                     /locus_tag="U1041_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019782768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEM4767483.1"
                     /translation="MVVKIGLLGFGTVASGVPFLLEENQEKIEKAAHDSIEVAKVLVK
                     DEAEKDRLLAAGHDYHFVTNIDEILADEDIAIVVELMGRIEPAKTFITRALEAGKHIV
                     TANKDLLAVHGSELRALAEEKGLALYYEAAVAGGIPILRTLVNSLAADKVTRILGVLN
                     GTSNFMLTKMVDEGWTYEKALQTAQELGYAESDPTNDVEGIDAAYKAVILSQFAFGMT
                     VDFEHVAHKGISNITPEDVAVAQELGYVIKLVGDIQETTSGIAAEVSPTFLPKNHPLA
                     SVNGVMNAVFVESIGIGQSMYYGPGAGQKPTATSVMADIIRIVRRLKDNTIGKAFNEY
                     SRPLQLAAPSDVKSEYYFSIDAPDKNGKMLRLAEIFNSEEISFKQILQQAADGETARL
                     VIVTHEMSKTQLENVTDKLSKETDFTVLNTFKVLGE"
     gene            43092..43952
                     /locus_tag="U1041_000343"
     CDS             43092..43952
                     /locus_tag="U1041_000343"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEM4767484.1"
                     /translation="MKIIIPATSANIGPGFDSVGVALSKYLTIEVFEETDEWVIEHNL
                     EHVPSDKNNLLIKTALKIEKGLRPHRIRMISDIPLARGLGSSSSVIVAGIELANQLAG
                     LNMTADEKLLKATEIEGHPDNVAPAIFGNLVISSYVNKRVQAVVTEFPEASFVAFIPN
                     YPLRTVESRGVLPSQMGYKKAVAASAIANVAVASLMAGDLEKAGKSIQSDMFHEPFRQ
                     LLVKEFCPIKQTAQELGAYATYLSGAGPTVMVLAPKDREDAIVLALEELNLDGTVHRL
                     QVDTKGIAIV"
     gene            44186..45091
                     /gene="murB"
                     /locus_tag="U1041_000344"
     CDS             44186..45091
                     /gene="murB"
                     /locus_tag="U1041_000344"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEM4767485.1"
                     /translation="MKDKIRLELEGIDIRFDEPLKEYTYTKVGGAVDYLAFPRNRYEI
                     VRIVEFAKREGIPWQVLGNSSNIIVRDGGIRGFVIRMDKLNSVTVSGYTIEAEAGANL
                     IETTKVALFHSLSGFEFACGIPGSIGGAVYMNAGAYGGEVAHILVSAQILTPAGYVET
                     LDHRELRFGYRSSILQENGAIVLSAKFALKPGNHTVIQQEMARLTHLRELKQPLEYPS
                     CGSVFKRPLGHFAGQLIMDAGLKGYRIGGVEVSEKHAGFMVNVDNGTAKDYENLIAHV
                     IDVVEKSSGITLEREVRIIGDPSDT"
     gene            45237..46391
                     /locus_tag="U1041_000345"
     CDS             45237..46391
                     /locus_tag="U1041_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000184097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767486.1"
                     /translation="MKKPIIEFKNVSKVFEDSGTTVLKDISFELEEGKFYTLLGASGS
                     GKSTILNIIAGLLDASSGDIYLDGQRINDVPTNKRDVHTVFQSYALFPHMTVFENVAF
                     PLKLRKVDKAEIERRVTEALQMVRLSGYENRSIQKLSGGQRQRVAIARAIINQPRVVL
                     LDEPLSALDLKLRTEMQYELRELQQRLGITFVFVTHDQEEALAMSDWIFVMNEGEIVQ
                     SGTPVDIYDEPINHFVATFIGESNILSGRMIRDYLVEFNGKRFEAVDGGMRPNEDVQI
                     VIRPEDLQITLPEEGKLQVKVDTQLFRGVHYEIIAYDDLGNEWMIHSTRKAIVGEVIG
                     LDFEPEDIHIMRLNETEEEFDARIEEYVEVEEVEDGLINAIEEERNEENL"
     gene            46375..47175
                     /locus_tag="U1041_000346"
     CDS             46375..47175
                     /locus_tag="U1041_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4767487.1"
                     /translation="MKKTSRLFAIPYALWVFLFVLAPVALIIFKSFFDIHGNFTLANY
                     QTYFNSPNMTYLRMSFNSIFYAGIITLVTLLVSYPTAYFLTKLKHRQLWLMLIILPTW
                     VNLLLKAYAFIGIFGQHGSVNQFLEFIGLGAQQILFTDFSFIAVAAYIEIPFMILPIF
                     NALDDLDKNLINASRDLGATPWQTFTKVIFPLSMNGVRSGVQAVFIPSLSLFMLTRLI
                     GGNRVITLGTAIEQHFLTTQNQGMGSTVGVVLILAMLLIMWMTKERKK"
     gene            47175..47945
                     /locus_tag="U1041_000347"
     CDS             47175..47945
                     /locus_tag="U1041_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4767488.1"
                     /translation="MKKFANIYLTVAFLLLYLPIFYLIFYAFNEGGDMNGFTGFTLEH
                     FSSMLGDSRLMLILAQTFLLAFLSSLIATLIGTFGAIYIYQAKPRFQNALLSVNNILM
                     VAPDVMIGASFLILFTMIGFQLGFVSVLLSHIAFSIPIVVLMVLPRLKEMNADMISAA
                     YDLGATQPQMLKEIMLPYLTPAIIAGYFMAFTYSLDDFAVTFFVTGNGYSNLSVEIYS
                     RARQGISLEINALSTLVFLFSILLVVGYYFISREKEAN"
     gene            47945..49015
                     /locus_tag="U1041_000348"
     CDS             47945..49015
                     /locus_tag="U1041_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000725675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4767489.1"
                     /translation="MKRLYSFFVGIVAIILVLWGISSKLEADSTQGTTDKLVIYNWGD
                     YIDPELLEEFTAETGIQVDYQTFDSNESMYTKIKQGGTTYDLAVPSEYMISKMTEEDM
                     LVKLDKSKIEGLENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVDNPPQEWEDL
                     WSEEYRDNIMLIDGVREVMGFGLQSLGYSLNSKNPAEIEKAAEHLYNLTPNVKAIVAD
                     EIKGYMIQDAAAIAVSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTAKNIDG
                     AYAFMSFMLRPENALRNAEYVGYSTPIPAAKAMLDEETQNDESFYPSEETMKKMEVYD
                     NLGPEILGMYNDLYLQFKMYRK"
     gene            49129..50667
                     /locus_tag="U1041_000349"
     CDS             49129..50667
                     /locus_tag="U1041_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014621447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClC family H(+)/Cl(-) exchange transporter"
                     /protein_id="HEM4767490.1"
                     /translation="MENHRKEVSFISQSILYSVLRGSLVGIVAGLVVVAFRLAIEKLF
                     SVFTHLYSLATDNAIYLLLIGGLYLVIALLVGKLIKDEPNAKGSGIPQVEAELKGIMD
                     LNWWSVLWRKFIGGVLSIASGLMLGREGPSIQLGAVTAKGISVLLKSSEMERRSLIAS
                     GAAAGLAAAFNAPIAGLLFVVEEVYHQFSRLVWVSALAASITANFISLHFFGLMPVLH
                     MPKDLQLLSLDQYWIYILLGVFLGLAGYLYEVVILNIQGFYTLLSKIIPLPVPYYSVF
                     AFLFIIPIGYFFPNLLGGGHHLILELPYLEQGLLTLAILILIRFVWSMISYGSGLPGG
                     IFLPILTLGSLLGLFVARFFLDIGFISQEQMLLFIVLGMAGFFAAISKAPLTAIILVT
                     EMVGSLNQLMVIGLVALSSYVMMDLLGGAPVYEAMLEKILPEEVEQQEHMTLIEVVVN
                     ETLDRRFVSELRLPDSCLITNQIHHGKSRIVKGNSQLSMGDSLLVAVPISQIHTVRRI
                     FDGD"
     gene            complement(50716..51047)
                     /locus_tag="U1041_000350"
                     /pseudo
     CDS             complement(50716..51047)
                     /locus_tag="U1041_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935801.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT        14787 a         9731 c        11757 g        14864 t
ORIGIN      
        1 caaacctgtt gcaccaaaac cacaggctcc tgtagctcca acaactgcta aagctggtgc
       61 ggctcaattg ccaaacactg gtgaagcttc atcatcagca acagtacttg gtgcaggtat
      121 gcttattgca gctcttgctc ttgcaggtaa acgtcgtcgc aacgaagact aattatgttt
      181 ctttatacga attcttcccc cgatagaata agtgaagaaa tttagataaa tgtagaaaga
      241 attacctttc tgaaaaaatg gtccattggg ccattttttt ggttgaattt tgatatacta
      301 gacatagtat attcaacgaa agcatgagaa tttgatatga aattagtcta tacagatatt
      361 cgcaatcctc tgacgcagta tttgacagat agtgctgcag aatttgctaa ggaaagtaag
      421 cgagtctttt acattgctcc taactctctg tcatttgaaa tggaacgtaa agtcttggaa
      481 tacctacctg aacaggcaac ttttgatatt atcgtgaccc gttttgggca attggcccgc
      541 tatttgatga ttgataggaa agaagcaggt caaccgctgg atgatgttgg tttggcaatg
      601 attttctttc gtgttctatc gcaatttgaa gatggcgact tgaaagtcta tggtcgtttg
      661 cagacagatt ttggtttcat taatcagctg gttgctttat acaaagaatt gcaacgggca
      721 aatatgtcta ttttggactt ggaagctatg gagtcaccag ataagcaggc agacttggta
      781 aagattttcc tatctgtgac tgaaattttg ttcaaagaag gctttgagca tcagtctaag
      841 ttagcacagc tgactggcct ggtagaaact ggtcagttgg atgagcagtt gaagaacatt
      901 gtgctggtgg tagacggatt ttctcgtttt tcggcagaag aagaagcttt agtaagtgct
      961 ttaaacgaac gggtgtcgga aattcttatt ggtgtatatg ccagcaagaa agctgtgcaa
     1021 gcgacctata cggaaggcaa tgtctatcaa gccaacgtcg actttttacg ccagttatca
     1081 gcgcagttcc agactaaggc aacttatatt ggtcaagagc cagtcttgga cagtattgga
     1141 aaattttcaa agaatatgga agcctattat gactacagcg ggaccatgat agacttgact
     1201 ccagcagacc aagaaaaaat ccaactctgg gaagttgtta accaaaaaga agaggtggag
     1261 caggttgcga ctgcaattcg tcagcatgtg catcaagggg ctcgctataa agacatcttg
     1321 ttgctcttgg gtgatgtgga tagctacaag ttgcagattg gcaagatttt tgacaagtat
     1381 gacattcctt actattttgg taaggcagag gagatgagtc atcatccgtt ggtccatttt
     1441 gtggagtcct tggaacgttt gcgccgctat cgtttccgag cggaagacct gctcaatctc
     1501 ctcaaatctg gtttgtacgc cagcatttcc caaaaggaga tggacctatt tgagtcttac
     1561 atcctctttg cggatatgaa agggcaggct gctttttcga ggactttttc ggtcaatggc
     1621 agagctgact acgacgctga agtcatcaag gagaaaaggc ttgtctatga tttggctgtc
     1681 ttggaacccc tacgtgctaa gattatggaa cctttgaacc agctgtttaa ggctggacca
     1741 caatctggaa ctgccttgct tgagaaattt atggcatttt tggaggcaat tgagcttcct
     1801 aaaaatatgg aaaaaatgtc tcgaaatttg agcgaagtag agcaagaaaa agaagagcag
     1861 gtctggaaaa gttttaccca tattcttgag aattttcatc agattttcgg aaaagaaaag
     1921 ttaaaaatgg atgattttct ggctatttta caggctggaa tgcaggccag ccactatcgt
     1981 accgttcctg caacagttga tgtggtcaat gtcaaatcct atgatttgat cgagccgcac
     2041 actgcaaagt atgtttatgc tatcggaatg ggccagtcca attttccaaa agttgctaag
     2101 aataccagtc tattgacaga agaagagatg gaaaaagtca atcttgtctc ggctagttct
     2161 tcacgttttg atttggtcag ccgagaaaat atcaagaaga accatgctgc catgatgtct
     2221 ctgcttaatt ctgcgacgaa acagttagtt atttccacac ctcagattta taacgaaggt
     2281 gaagatagtc tctcccctta tatcaagatt ctccaaaaaa tggggctgaa atccgaagaa
     2341 cgtggtcgga ttaaaacact cagtccgcaa gacatcggtc actacaagag tctcttatcc
     2401 cgtttgattg agtcagaaag accatctctt gaacatgaag aatgggaagg gcagacggcc
     2461 ttctggacag tcttggttcg tcatttgaag aagaaattgg agtcgcaagg cattgaaatt
     2521 ccgaccatta ctggcgaaat aacttctaaa cagcttgcag ctgatacctt ggctgcttta
     2581 tatccagagg ataagccgct caatctttct gcatccagct tgaccaattt ctacaataac
     2641 caataccttt actttgtccg taatgttctt cgcttgcggg aacaggaatc catccatccg
     2701 actgcctttc agcatggttt gttcttgcat cggatttttg aacgagtggt catggaccaa
     2761 tctgagctag attttgatca aaaagtggac aaggccatcc tgcatacgcg tgacgaggca
     2821 gaatttgcta tgttttataa ccaggatgcg gatgctcgtt atacggagga ggtgctggat
     2881 aagattgctc gctccagtgc gaccattttg cgggataatg atttggtgga aattgatggt
     2941 caggaaaaga gttttcgtca ggataaggcg ctggtttttg accttcaaaa tggcaagagt
     3001 gtgcatgtaa atggtaccat tgaccgcttg gataccttac aaatcaatca ggctgtcggt
     3061 gttgtggatt acaagtccag tgaccaatct ttttcagttg gggattttta caatggtctc
     3121 aaacctcagt tggtaaccta cttggcagcc ttacaagagc tggatgaaac caaggataaa
     3181 cctgtttttg gagctatgta tttgcatttg caggatccga ttatcaaatt aaaagacacg
     3241 aagaatttag aacagctaga aggagctgcc aatactagct tggcttacaa ggggcttttc
     3301 ttgaaggagg aaagtctggg gctcaatcat ttttatcaga ctcgtaacca actctatacg
     3361 gaagatgagt ttgcggtgtt attgaaccac aaccaagaac tctacaaaca agctgccatg
     3421 gacattctgg ctggtcgctt tgctattaac ccttatacca aagatgggcg ttcggtggca
     3481 ggtgagcagc tgaaggcaat cactggtttt gaggcggatc ggcatatggg catggcgcgg
     3541 cggttggtca aagaggccaa gcgtcaagat tggatggaac gaatgaaagg aggtcaggac
     3601 taatggcttt tgaacaattt ttaagcacgg aagaaatcaa ggctgtgcag cgggtggaag
     3661 ccaattctga taagcaacaa aaacgcacac ctgagcagat tgaagccatc tacacgcacg
     3721 gtcagaatgt tctggtctct gcatcggccg ggtcaggaaa gaccttcgtc atggttcaac
     3781 ggattttgga taagttgaag cgtggtgtgg gaatcgacca gctctttatc tcgaccttta
     3841 cagtcaaggc ggctggtgag ttgaaggagc ggattgagaa aaatctcaat gaaaccattg
     3901 cggagacgac cgatatggaa ttgcgtcggc atttgtctgc ccagttggcg gatttgacca
     3961 aggcagacat cgggaccatg gactccttta cgcagaaatt ggtaacgact tacggttata
     4021 gccttggtat ttctccgcag tttcggattt tacaggatga gacagaaaaa gcgagtctga
     4081 aaaaagaggt ctttgaccag ctctttgcag attatcttga acaggatgaa aatggtgcat
     4141 tccacaaact ggtttgcaat ttttcgggca accgtaagga taatagtggt ttccgtcagg
     4201 ttgtttatca ggtgcatgat tttagccaat cgacgagcag tccaactaaa tggctgaaag
     4261 agcaggctgt tcaagctgat ttgtacagtc aagagcgtat agagctgatc ttagagcaag
     4321 gttttaagga aaaagtgtta gacaagctct atcaagctgc agatttcttc cgctaccatg
     4381 tggaatgggg cagaaatgac tttggatctg ccaagtattt tgccaatgta gaagaagtct
     4441 tggatttgct gacaggttta gatagtctgg accagaagga cttgatggaa cgggttgaaa
     4501 gaatccttct catcaatgac cagtccagag gcaagggcct gaccaatgcc aatcgaccaa
     4561 aagatgagca tttgatagcc tttaaagaag aatataatgc tggcaagagc cagattatct
     4621 caggactacg agatttgggt caggaagttt atgaattaac cctgctgaaa gactatcaga
     4681 ttcaagcttt gccaatgctg atattgttac gtgactttgt cttggatttt tcgcaggctt
     4741 atctggatgt caaaatcaag gaagcagctt ttgaatttgg cgatattggg catttcgcta
     4801 ttcgtatttt agaagaaaat gtagacatcc gccagttttt ccaagaaaaa taccacgaag
     4861 tcatggtgga cgagtatcag gataacaacc atagccaaga gcgaatgctg gacctgctgt
     4921 ctaacggtca caaccgcttt atggtgggcg acattaagca gtccatctat cgattccgtc
     4981 aggcggatcc gatgattttc caagagaaat ttgaactgta tcaggcaaat cctcaggctg
     5041 ggaaattgat tttgctcaag gaaaatttcc gtagtcagat tgaggtcttg gaggcaacaa
     5101 atgctatttt cacgcgcctg atggaccgtc aagtcgggga aatcaagtat gacaaaaccc
     5161 acagtttagt ggctggtagt cctggtcaaa aaattgccca gcccaagcat gagatggaat
     5221 atttgattta tgaccagcag gatagtgcac attcttcaag ggatgctgag gaggaaacac
     5281 ctctgactgc tggtgaaatt gaggtcgttg caaaagagat tattcgtctt cacaatgaag
     5341 aaggagcaga cttcaaggac atcactctct tggtacaaaa gcggacgcac aatgatctca
     5401 ttatgtccat ttttgaaaaa catgggattc ctattgtggc agatggcgga gcagcctcct
     5461 atctgcaatc tttagaagtc atgattatgc tggatacctt gcgggttatc aataatccac
     5521 tcaatgacta tgccttggtt gccctgctta aatcacctat gttccgattc gatgaggatg
     5581 agctgacacg gatttccttg caggctggga ccggtttctt gtaccagaaa atggaaatag
     5641 cccatcaaac aaatgggcaa catcctgaac ttatgtcagg agagttgaag aagaaaatca
     5701 aggatttctt gtctatctta gaaaactggc gtgcctatgc caaactgcat tctatctatg
     5761 acttgatttg gaagatcttc aatgaaaaat tctactatga ctatgtagga gctcttccaa
     5821 atggcagcaa gcgtcaggcc aatctatatg cactaggtct gcgtgccaac cagtttgaaa
     5881 aaacaggcta caagggcttg tcccgcttca tcgccatgat tgatcgtgcc ctagcaaatg
     5941 ataaggattt ggcagatgta caagagtttc taccgcaaaa tgctgtacag cttatgacca
     6001 tccataagtc aaaaggtttg gagttcaagt atgtcttcct catgaacatc gataagcgat
     6061 tcaacttgga agaccattac cagtcagtca tcatcagccg gaaaaatggt ctaggtatcc
     6121 aatatttagc ggatatgaaa gataaggtaa atagcccatt gcctcaggtg cgagtcttaa
     6181 tgaacaccct tccttatcaa aataatctcc aagagctaaa aattgccaat ctttcagaac
     6241 aaatgcggtt gctctatgtc gcactaacgc gtgccgagaa gaagctgtat ctggttggaa
     6301 agggtaatgc tgacaagtta gctgaaaaat acgatggtaa gaaggaagat ggcgtacttg
     6361 cccaatcaac tcgtgaaagt atggcgacct tccaagactg gattctagcc attgatgagg
     6421 ccttctcagg agatgacttg cacttcaaga aagtctttgt gacggatgag gatttgacag
     6481 aggagaagat tggtaaactt acattgaaga gtaaactaga agatgccagc cttaaagata
     6541 ttcgtcaatc agaagacatc gcccaggcct tggaccagtt gtcttctgtt caagagttga
     6601 acgaacgcta taaggctgct atagaattac caagtttacg gactccaagt caaatcaaga
     6661 aactctatga gcctgtcttg gaacaagaag gcatggaagt tatggaaaaa taccagccaa
     6721 aacggacctt caacttgcca gatttttcca agaaaccaaa aatcactgga gcccaagtcg
     6781 gttcagcagt ccatgaactc atgcaacgct tggatctgtc ttggttggtg acagaagata
     6841 cggtaagaga agccctagaa gctgttcatg ctgagcaagc ggttaaagac aaaatcaatg
     6901 ttcagatgat tttagatttc tttgatacag acttaggaag agaaattcta gccaatacgg
     6961 ataaacttca tcgagaagct ccatttgcaa gtttgcagac agatcctgta tctcaggaaa
     7021 actttgtcct tcgtgggatt atagatggct acctactgta tgatgatcat attgtcctct
     7081 ttgattacaa gacagacaaa tatgaccaac caatccaact cagccaacgt taccaagctc
     7141 aaatgcaact ctatgccgag gcattgaaaa aagcctacaa gatagatcgt gtagactgcc
     7201 atttgatttt gcttggtggg gagaggattg aagtggtcga agtcaaggta aactaaaagt
     7261 gagtggttaa actcgctttt tctgtttggt tagattgagt ccaaatggga caagattttc
     7321 ttcttttttc aaaatccgct ggatattttc cttgtggcgg atgatgacaa aactgtcaag
     7381 aaagacgata atcactgtaa agagccagtc gtagcttggc aggatgattc ctattgctgg
     7441 aaatagcaga gctcctaaga ttgctaaagc tgctgctaat acgctagaga aggaaaccat
     7501 cgaagtgagg taaagagaag tcacaaaaat gatgactaga tagagacaga aagcaggtgc
     7561 gacgcccaga agcataccag cagatgtggc aaccgccttt ccacctttga atttggcaaa
     7621 gatagggaaa gtgtgcccca gtacagccat taacccaaat acaatcggag aaattccttg
     7681 ggcatgaaag atcagcggaa gcaaggctgc caacgttccc ttgagaaaat caattacaaa
     7741 tacaatggtc cccgccttcg gacctaaaat acggaatgtg ttggttgttc cagtatttcc
     7801 agagccatgc tcacgaatat tgatattgaa aaaagcttga cctatccaaa gtcctgacgg
     7861 gatagatccc aataaatatg caataaatag taaaataaga ttgactaaca tgttttcatt
     7921 atagcataaa tttactccta ttttcctcaa aagcgaatta ttctctgtcc catcggattc
     7981 ttcaacagaa aaattttgca aaaatgctga aaaacttgta atatagtaag gatgacaagt
     8041 atggaggtca attttgacta agaaagagat taacataaat aactataatg acgatgccat
     8101 tcaggtactg gaagggctgg atgccgttcg caaacgcccc ggaatgtaca tcggctccac
     8161 agacggaaac ggcttgcacc acatggtctg ggagattgtc gataacgctg tcgacgaagc
     8221 cctgtctggt ttcggtgatc ggattgacgt gagtattaac aaggacggca gtctgtctgt
     8281 gtctgaccgt ggacgtggca tgcccgtcgg tatgcacgct acaggcaagc caaccgttga
     8341 agtcatcttc accgttctcc acgcaggtgg taagttcggt caaggtggct acaagacttc
     8401 aggtggtctc cacggggttg gttcctcggt ggtcaatgcc ctgtccagct ggttggaagt
     8461 tgagattacc cgtgacggag ctgtttacaa gcaacggttt gagcagggcg gaaagccagt
     8521 cacgacccta gagaagattg gtaccgctcc aaaatcaaaa acaggtacaa aagtaacctt
     8581 tatgcctgat gacaccattt tctcaacgac cgatttcaag ttcaacacca ttgccgaacg
     8641 cctgaaagaa tcagccttct tgctcaaaca agtcactatg accttgacag atgagcggac
     8701 gggtgagcag gaagagtatc actatgaaaa tggtgtgcag gactttgtat cctacctcaa
     8761 cgaagacaag gaaaccctga caccagtcct ctattttgaa ggagaagatg caggtttcca
     8821 agtccaagtg gccatgcagt acaacgacgg ctattcagac aatatcctgt ccttcgtaaa
     8881 caatgttcgg accaaggacg gcggtaccca cgaaacaggg ctcaaactag ccattaccaa
     8941 ggccatgaac gactatgctc gtaagaccaa cttgctcaag gaaaaggaca agaacttgga
     9001 aggctctgac taccgtgaag gtctgtctgc ggtcctttct atccttgtac cagaagagca
     9061 cttgcagttc gaagggcaga ccaaggacaa gttgggaagt ccacttgctc gtcctgtggt
     9121 ggacggcatt gtatcggaca agctaacctt cttcctattg gaaaatggcg agctagcatc
     9181 taatctagtc cgcaaggcca ttaaggcccg tgacgcccgc gaggctgcgc gtaaggcgcg
     9241 tgacgaatcc cgaaatggca agaaaaacaa gaaggacaag ggccttctat caggaaaatt
     9301 aaccccagcc cagtccaaaa atccggctaa aaatgaactt tatctggtcg agggagattc
     9361 agccggaggc tctgccaaac agggccgtga ccgcaagttc caagccattc tacccttgcg
     9421 aggcaaggtt atcaacactg ccaaggctaa aatggcggac attctaaaaa acgaagaaat
     9481 caacaccatg atttacacca ttggtgcagg tgttgggtca gatttcacta ttgaagatgt
     9541 caactacgac aagattatta tcatgaccga tgcggatacg gatggtgccc acattcagac
     9601 tctcttgctg actttcttct atcgctacat gcgaccgcta gtagaagcag gtcgggttta
     9661 cattgccctg ccgccactct acaagatgtc caaaggcaag ggtaagacag aaaagattgc
     9721 ttatgcttgg tctgacggag aattagaaga tctccgcaag gattttggca agggcttcat
     9781 cctccaacgc tacaagggtc ttggtgagat gaatgctgat cagctctggg aaacaaccat
     9841 gaaccccgaa acccgtaccc ttatccgtgt caccattgaa gatctagccc gtgctgaacg
     9901 tcgtgtatct gtccttatgg gcgacaaggt cgagccacgc cgtaagtgga ttgaggataa
     9961 tgtgaagttt accttggagg aagcgacagc tttcaccaaa taatctcagg gaattgaggt
    10021 gccatatggt tttagaaaat aaattgggga taaaggactc tttagagctg gcaaaaatgg
    10081 aagaaaaagt tagtaaagag aaggcaaaac ggctttttga ggaaaaattg gtagccaata
    10141 agcaagctgg gacttttgaa acccttgctt ttattcaccg ttttctattc gaagatatct
    10201 atgattttgc aggcaaggta agagaggtca atatcgcaaa aggtggcttt cgctttgcac
    10261 ctctcatgta tcttcacacg tctttagcaa caattgaaaa catgccacag cgtacatttg
    10321 cagaaatcat tgaaaaatat gtagagatga atgtggctca tccctttcgt gagggaaacg
    10381 gtcgtagcat gaggctctgg ttagaccatt tgttaaaggc tgaattagga caggttattg
    10441 actggtctct tgtggataaa gaagattatc ttttggcgat ggagcgtagt ccaatccgtg
    10501 atattgaaat caaatatatc ctaaaaaatg ccttgactga tgaaattgac agtagagaac
    10561 tctatatgaa aggcatcgac cattcttatt actatgaagg atacaatctc tatcgcacag
    10621 aggatttgta actctagaac aagcaaacta tgtgaggtgt tttatgccaa taactattcc
    10681 caaattgcct aatcgtttga cccagactgc caagaattgg gcagataagc agaaagagca
    10741 gttagctcag ttggacttga aagagaaatt tgaccaggcg cttgaaacct ggaaatcgtc
    10801 taagaccaga gagcgagctg aggccttgtt gtctgatcaa gggaaattgg aacatttttt
    10861 acatagcacg gaacggaaac tgtctcgtat gccttttggt ggagataagt ttgcggctat
    10921 tccaggcttg atttccatgg tgcgaagcta tatccgtaga gattacaata agttacccaa
    10981 agggacaatc ctcgcaatta taggtgcttt gatttatttt ttcagtccta ttgatgcctt
    11041 accagatttc atccttggag caggtctact tgatgattcc tttgtcctta atgcctgcct
    11101 caaattagtt aaatcagatt tagatgattt cagaaactgg caggcaagcc agtggaaggc
    11161 ggaagagtag ctctgctatt ttacataaaa aataataaaa gaagaaaact atgagcaaca
    11221 ttcaaaacat gtcccttgag gacatcatgg gagagcgttt tggtcgctac tccaaataca
    11281 ttattcagga gcgggctctg ccggacattc gtgacggtct caagcccgtg caacgtcgga
    11341 ttctttattc catgaataag gacggcaata cctttgacaa gggctaccgc aagtctgcca
    11401 agtcagtcgg aaatatcatg gggaatttcc acccgcacgg tgattcctct atttatgatg
    11461 ccatggtccg catgagtcag gactggaaga accgtgagat tttggtggag atgcacggga
    11521 acaacggttc catggacggc gatccgccag cggctatgcg ttacaccgag gctcgcctgt
    11581 cggaaatggc tggctatctc ctggccgaca tcgagaaaaa gacggtacca tttgcctgga
    11641 actttgacga tacggaaaaa gaaccaacgg tgctaccagc tgcctttcct aatctcttgg
    11701 tcaatggagc gacagggatt tcagctgggt acgcgactga catcccgccg cataatttgg
    11761 cggaggtcat cgatgccgtt gtctatatga ttgatcatcc gacagctaaa ttagaaaagc
    11821 taatggagtt cttgcctgga ccagacttcc caacaggtgc cattatccaa ggggctgagg
    11881 aaatcaagaa ggcctatgaa actggtaagg gccgtgtcgt tgtccgtagc cgttgcgaca
    11941 tcgaacaact caaggctggt aagaaacaga ttgtcattac tgagattcct tacgaggtca
    12001 acaaggctgt tctggtcaag aagattgatg atgtccgtgt caacaacaag gtgcctggca
    12061 ttgccgaggt gcgtgatgag tcagaccgta ctggtctgcg gattgccatt gagctgaaaa
    12121 aagacagcga tgagcaaacc attctcaact atctctacaa gtacactgac ctgcaaatca
    12181 attataactt caacatggtg gcgattgata atttcacacc gcgtcaggtc ggcttgcaga
    12241 agattctgtc cagctacatc gcccaccgcc gtgagattat cattgcccgg tctaagttcg
    12301 ataaggaaaa ggcagaaaaa cgcctccaca tcgtagaagg cttgattcgc gttatttcca
    12361 tcttggacga agttattgcc cttatccgtg cttctgaaaa caaggctgac gccaaggaaa
    12421 acttgaaaat cagctatgat tttagtgagg aacaggctga ggctatcgtg accttgcaac
    12481 tctaccgttt gacaaacacc gacattgtga ccttggaaaa tgaagaagca gctctaagcg
    12541 agcagattca gaccttggca gccattatcg gcgatgagcg gaccatgttc aatctcatga
    12601 agaaagaact gcgtgaggtc aaaaagcagt ttggcaatcc tcgtttgagc gaattgcagg
    12661 atcaggcaga aacgattgag attgacaccg ccagcttgat tgtcgaggaa gaaacctttg
    12721 tcagcgtgac caaggcaggt tacatcaaac ggaccagtcc gcgttctttc aatgcctcaa
    12781 cccttgaaga aatgggcaag cgggatgacg accagttgat tttcttgcag aatgccaaga
    12841 caacccagca cctcttgctc tttaccaatc ttggaaatgt catctatcga ccggtccatg
    12901 aactgacaga tattcgttgg aaggacatcg gagaacacct gagccaaacc ctcatgaact
    12961 ttgacaccaa tgaagaggtt atctttgcgg aattggtgga gaattttgaa gaggggactt
    13021 atttcgcagt gaccaaatac ggtcaaatca agcgtgtgga gcggaaggag tttactcctt
    13081 ggcggactta caagtccaag tcaaccaagt atgccaaact aaaagatgca gaggatgtgg
    13141 tcattaccgt atcacctgtg gtcttggacg acattatgct tatcacagaa aagggctacg
    13201 ctctgcgatt taacatcgaa gaagtgccaa tcatcggtgc caaggcggcc ggtgtcaagg
    13261 cggtcaacct caaggatggg gatgtggtgg ctgcggcctt tatcagcaat accagctccg
    13321 tttatctcct gacccagcgt ggtagtttga agcggatggc gacggaggaa atccctgtga
    13381 ccagtcgtgc caagcgtggt ttgcaggtcc ttcgtgaact caaggctaag cctcaccgtg
    13441 tctttgcggc aggtccagtc ttgacagacc agggggattt tgacctcttt agcacagcaa
    13501 atgaagatga aacgacaagt caaatccttc acgtgcagtc caaaacgggt aaactctatg
    13561 atgtcgatgt gacccagctt agcctgtccg aacgaaccag caacggtagc tttatctcag
    13621 aaaccatttc tgatgaggaa gtgttggtgg cattcatttt atagtgagca agccccctac
    13681 aaggggcttt ttcgtggcaa aaatcttgat atactacgta taccaagtat tgacttacca
    13741 gtcaatactt caatctatta gtaaaagggg ttcaagatga cacagcagtt ttcaaaagca
    13801 gaagccaacg aagcaataaa aaagaattat aggaaagctg agaaaattct acaaaataag
    13861 gatgatttcg agcgtttttt acaaagtgtc gagaaaaagt tgcaccatgt tcctgttgtt
    13921 ggtagtgact tggcagttgt accagctatg atttccttgg ttcgacattt tgcagaggga
    13981 cggtatcgcc atgtgccgat tggaacgatt ttagcaattg taagtagcct tatctacttt
    14041 gtttcaccag tagatgttat tccagatgtg cttcctgtgg tgggagttgt tgatgatgct
    14101 ttagttatta aggtctgtct agaaatggtt aaatctgact tggaaaccta tgatgaatgg
    14161 cggataagaa aaggtttgtt ataggggaaa aacaaataat tgtcagaata ttccttgaaa
    14221 ttttacataa aaaacagtac aatgtttgaa aaagtaaagg agaataccta tgacagtaaa
    14281 tatcgactgg gaaaaccttg gttttgccta catgaaatta ccttaccgct ttattgctca
    14341 tttcaagaac ggccagtgga atgaggggca gctgactgaa gatgcggagc ttcacatttc
    14401 agaaagctcg ccagctcttc actacggaca gcaggctttt gagggcctca aggcctatcg
    14461 caccaaggag ggaaaactcc agctctttcg tccagaccaa aacgctgagc gccttcaacg
    14521 aactgctgat cgcttgctca tggagcctgt accgacggag ctcttcatca aggcttgtaa
    14581 agaagtggtt aaagccaacg cagactacgt tcctccctat ggaactggtg gcacgctcta
    14641 tctccgcccg ctcctgattg gtgtcggcga catcatcggc gtaaaaccag cggaagagta
    14701 cattttcaca gtttttgcca tgccggtcgg caactatttc aagggtggtt tggctccgac
    14761 caactttctc attcaggaca agtacgaccg tgcagcacca aatgggactg gggcagccaa
    14821 ggtcggcggt aactacgcag catcgctctt accgggtcaa tatgccaaaa agcagggctt
    14881 ctcagatgtc atctacctgg acccagctac ccacaccaag attgaagaag tagggtctgc
    14941 taatttcttt ggtattacag ctgataacga gtttgtcaca ccgatttcac catcaatctt
    15001 gccgtccatt accaagtatt ctctcttgta tttggcagag catcgtctgg ggatgaaggc
    15061 agtggaacgt gaagtccttg tcgaagaatt agaccagttt gtcgaagcag gagcttgcgg
    15121 aacagctgca gtcatctcac caattggtgg tatccagatt gtagacaaac tccatgtttt
    15181 ccatagtgaa acagaagtag ggcctgtcac tcgtaaattg tatgaagaat taacaggtat
    15241 ccagtttggt gatattgaag cgccagaagg ctggattatc gaagtagatt aatttcagaa
    15301 ggcttgcact tgcaagctct tctctttttt tgtagaatag taaaagtgag gtttgaaaat
    15361 gagtaaaaaa gataaaaaaa ttgaaattca gattgaagat agcaaagttc ttgtcaatag
    15421 agaagagttc cctggctacc gccttgttat aggtaaaaaa gtaattggag aaattgcaga
    15481 attggctgaa aataactttg cagttataaa aaatggaaac accgaaagct tttacaaaaa
    15541 attagaaaaa gcagtcggaa atattattga aaattataat ttaagtcact aaaaggcttg
    15601 taatagtcgc tattttatgt tagaatagtg actgttagtg cacggagaga tagcgaagag
    15661 gctaaacgcg gcggactgta aatccgctcc ttcgggttcg ggggttcgaa tccctctctc
    15721 tccattgaac aggatacaaa ggacgttaag aaatccgtat gaaaatagga aactgacgca
    15781 gtgtgctaaa cacacaagga agtttatctt tttcactagg attttagtcc gtgttcaact
    15841 aagatacgag agatgttctg gtttaccaga agtttttgta gaaaattagg agtctgacgc
    15901 tgagtgttaa cactcaagga aggctatcta ttttcctaag aaattaatat cgagttcaat
    15961 ttcttgtgat tagtaaataa atgaattgta tctatttttt ggggtatcgc caagcggtaa
    16021 ggcaagggac tttgactccc tcatgcgttg gttcgaatcc agctacccca gtaaaggtac
    16081 tagatatagt ctagttcgtc aaagatgtct aattgttgtt gtccttgcgt gtgccttaaa
    16141 taaaatatat tttatgttgg gtcgaaagac ctgattgtcg gaggtttttt tataatgaac
    16201 gaatttgaag atttgttgaa cagtgtaagc gaagttacac ctggtgatgt ggtaactgca
    16261 gaagtcttga ccgttgatgc tggtcaagca aacgtagcta tctcaggtac tggtgttgaa
    16321 ggcgtattga ctcttcgtga gttgactaac gaccgtgatg ctgatatcaa cgaccttgta
    16381 aaagttggtg aaacacttga attgttagta cttcgccaag ttgttggtaa agatacagac
    16441 actgttactt atcttgtatc taaaaaacgt ttggaagcac gtaaagcatg ggacaagctt
    16501 gttggtcgtg aagaagaagt tgttacagtt aaagtaactc gtgccgttaa aggtggtctt
    16561 gcagttgaat ttgaaggtct tcgtggtttc atcccagctt caatgatcga cagccgtttc
    16621 actcgtaaca ctgagcgttt tgtaggtcaa gaatttgatg ctaaaatcaa agaagttgat
    16681 cctgctgaga accgtttcat cttgtcacgt cgtgacgttg ttgaagcaga atctgcagct
    16741 gcacgtgctg aagtatttgg taaattggca gttggtgaag ttgtaactgg taaagttgca
    16801 cgtatcacaa gcttcggtgc tttcatcgac cttggtggtg tagatggttt ggtacacttg
    16861 actgaattgt cacacgagcg taacgtatct cctaaatcag ctgtaacagt tggtgaagaa
    16921 gttgaagtta aagttcttgc aattgacgaa gttgaaggtc gcgtatcatt gtcattgaaa
    16981 gctacacagc ctggtccatg ggatggcgtt gagcaaaaat tggcagctgg tgatgtaatc
    17041 gaaggtaaag taaaacgttt gactgacttc ggtgcattcg ttgaagtatt gccaggtatc
    17101 gatggtttgg tacacatttc acaaatttca cacaaacgtg ttgagaatcc aaaagatgct
    17161 ttgtcagtag gtcaagaagt tactgttaaa gttcttgaag tgaacgctgc tgatgagcgt
    17221 gtatcacttt ctattaaagc tttggaagag cgtccagcag cagctgaagg cgaagaaaaa
    17281 gctgaaaaac gtgctccacg tccacgtcgt caaaaacgtg aagaaaaacg tgattacgaa
    17341 ttgccagaaa ctcaatctgg attctcaatg gctgaccttt tcggtgacat tgaattgtaa
    17401 ttcatataaa aacttgcctt gtgcaagttt ttcctttcca cccttagtgt aatggatatc
    17461 acgtaagatt ccggttcttg agatgggggt tcgattccct cagggtggac taaagtgaaa
    17521 agcctgcatt aacaggcttt tttgttatat tatatcaagg aggctatgat atgttacatt
    17581 ttgaaaatga ctataacaaa ggtgcccatc ccgccttgct agaagcctta gttgcgagca
    17641 accaagaagg tttatctgga tatggcactg ataaatatac tgaatctgct atcgaaaaaa
    17701 tcagacttgc tacggactgt cctcatgcac aagttacgtt tttagcaggt ggcacgcaga
    17761 ccaatcaaat tgtcatttcg tctatgttag cttcctatga aggagtcatt gcagcggata
    17821 ctggtcatat tgcagttcat gaagcggggg caattgaatt tacaggccat aaggtgttgg
    17881 tcttgccgca tacggatggc aaacttgtcg caagtgaagt tgagaactat atttccgatt
    17941 tctacgcaga tgctaatcat gctcacatgg ttcatccagg aatggtttat atttcccacc
    18001 cgactgaata tggtacactt tatagcaaaa cagagctaga agatttgtcc aaagtttgcc
    18061 aacagcataa tattccgctc tttttagacg gtgctcgttt gggttatggt cttgctgctc
    18121 gtgaaacgga tcttgatttg aagacaattg cagagttgat agatgttttc tatattggtg
    18181 gtacaaaact cggtgccttg atgggggaag ctttggtatt tacaaagaac aaccagccta
    18241 agaatttcgt atcgattgtc aaacaccatg gtgccttgtt ggcgaaagga agagtgacgg
    18301 gtgtccagtt tgattgctta tttactgatg acttgtatct taaattgggg cgtcatgcta
    18361 tcgcaatggc agagcaactg acccagattt tggaagagaa aggctttcaa ttctatctca
    18421 aatcaccgac caatcagcaa tttgttattg ttaagaatga agaattgact agattgacag
    18481 aagttggaat tgcctatggc ttctgggaga aatacgacga tagccacagt atcatccgct
    18541 ttgcgaccag ctggtcaact agtcaagcgg atattgatga attgataaat atattatagc
    18601 aatcaaaaaa gaaagggtta gcctttcttt ttagtttgta aataatgata gcgataaact
    18661 gcataacgtt caataaggcg gtagcctatt cctcctgcga ttgcatgtac aatcagggca
    18721 atgtgcaatt ctagtggagc gtttatagtg atactaaata gaataccgat tacagtccat
    18781 cctagtatca cccaccataa gtacttaaat ggagcatact gaccatcctg gtctttaact
    18841 tcactggaaa ccctgattga acaactggtt aatactccca tggggagcaa tgaacgagta
    18901 tcaaatggtt ctggtaaaaa tgacgataag gcgaagattt gtataagcgc aaaaatcagt
    18961 agccaaacga aaatcggcgt ttttagaatg acgtatttca tattgcgcac ctcctgaaat
    19021 tagtatatca aatccaagaa agtaaacaaa tatttttgtg ctattgatta gaagtcgttt
    19081 cggatgtccc actagttacc tctgtatcag tactggtttc tgtccttgtc tccgaagctt
    19141 gggtagcaga cgtttctgta gacgaggaag aggcagtaga ctctactgaa gagcaggtct
    19201 cggtttgggt tgaggatgtt gtttcggagc ttgaacttgt taaatcttgt acttctgtta
    19261 acggattatc gctagatgat tggctgggac tagtggcgct ggatgatgaa atggtagtac
    19321 ttggagatgt tgaggatgtt acaggtttcg ctgtaaaggt gtagatagtg atgcaggcag
    19381 tgataatccc taaaatagac ccgataaagg ttaaatattt ttgaaaatta gttaaaccag
    19441 ccggtttttt atttgtattc ttacgtgtat tcatgatgta cctccacctt tagtttaaga
    19501 taggaagttt aaaactatct taaagattgg cgaaaggcat gaaaacatga taaaatagga
    19561 ctattgcaat aaaaggaata taaaaaatga tttattttga caatgcagcc acgactcagg
    19621 tctatccaga agtgctcaag acctatacgg aagtggcgac gaaaatctgg ggaaatccct
    19681 ctagccttca tagtctcggc agtcaagcaa cccgtatttt ggaagcatct cgcaagcaaa
    19741 ttgcagaatt gctaggcaag gatagcaagg aaatcttttt cacctcaggt ggtacggaag
    19801 gtgacaactg ggtcatcaag ggagtggcat ttgagaaagc acatctgggc aagcacatca
    19861 ttgtgtcagc tattgagcat ccagcggtaa aagagtctgc actttggctc aaaacgcaag
    19921 gttttgaggt ggatttggcc ccggtcaatg cccaaggttt tgtggatgtt tcagccttag
    19981 aaagcttgat tcgtccagat accacactgg tttctatcat ggctgttaat aatgaaattg
    20041 gtgctattca gcccattcag gaaatctccc agctcttagc tgataaaccg accatctcct
    20101 tccatgtgga tgcggtacag gcaatcggca aggtgccaac ggaacggtat ctaacagacc
    20161 gagttgattt tgctagtttt tcaggtcaca aatttcactc tgtcagagga gtaggtttcg
    20221 tctatgtcaa agctggcaag aaaatcgctc cgctattgac aggaggagga caggaaagcg
    20281 acaaacgctc aacaactgaa aatgtggctg gtatcgcagc aacggctaag gcgctccgct
    20341 tgaccttgga taaggcggta gatagccaga agaggctggc ggctatgaag cagatccttg
    20401 tggatgaatt gggcaaatat gctgatgtga cagtcttttc tggactagag gactttgtgc
    20461 caagcattgt gactttcggg attaaaaata tccgtggcga ggtcattgtc catgcttttg
    20521 aagaccacca gatttacatt tcgacaacgt cggcctgctc gtccaaggct ggaaaaccag
    20581 ctggaacact gattgctatg ggtgttccgc agaagttggc tcaaactgcc gtccgtatca
    20641 gcttggacga tgacaacgat atggggcaaa tcgaacaatt cctcacgatt ttcaaacaaa
    20701 tttatcaaaa cacacagaaa gtaaggtagt atgaactatt cagaaattat gattcgctat
    20761 ggcgaattgt caactaaagg gaaaaacaag atgcggtttg tcaacaaact ccgcaataat
    20821 atcaagcatg tcctttctgt ttacccagaa gtgaccgttt attttgaccg tgaccgtggt
    20881 catgtctatt tgaatggggc ggattatcag gaagtttcag cttcattgaa gaagattttt
    20941 gggatccaaa atttcgcacc gtcttataag attgaaaagt ctgttccagc tttgaaagaa
    21001 gcggttgtgg aaataatgca gtccatttac aaggaaggga tgaccttcaa gattgcggca
    21061 cgtcgtagtg accacagttt tgaattggac agccgtgacc ttaaccaagt ccttggagat
    21121 gcggttttta cagctattcc aaatgtacag gtacagatga agtcaccaga tattaccttg
    21181 cgagtggaaa ttcgtcctga tgctgcttat atttctcatg aagaaatcaa gggtgcaggt
    21241 ggccttccag ttggaacatc tggtaaggga acgcttatgt tgtctggtgg tattgattcg
    21301 cctgttgcgg gctatttagc acttaaacgt ggggttgaaa tcgaagccct gcactttgca
    21361 agtccgcctt atactagccc aggtgctctt aaaaaagccc atgatttgac ccgtaaattg
    21421 acagcctttg gtggtaatat cacctttatc gaagtgccgt ttacagaaat tcaggaagaa
    21481 atcaaggaaa aagcacctga agcttatttg atgaccttga cacgtcgctt catgatgcgg
    21541 attacagacc gagtacggga agagcgtggt gccatggtta ttatcaatgg tgaaagtcta
    21601 ggacaagtgg caagtcagac cttggaatcc atgcaggcta tcaatgcggt gaccaataca
    21661 ccagttatcc gtccagtcgt taccatggac aagttggaaa tcattgatat tgcacaagaa
    21721 attgatacct ttgatatttc cattcaacca tttgaggact gctgtaccat cttcgcccct
    21781 gaccgtccaa aaactaaccc taaaatcaaa aatgtcgagc aatacgaggc tcgaatggat
    21841 gtagaagcct tagtggaacg agctgtggct gggattatcg taactgaaat cacaccgaaa
    21901 gaggaagtga aagacgaagt agatagtttg attgaagact tactgtagaa ttcaattgtt
    21961 ttgacataca tgtaaatcca gttattgctg gattttttaa tacgaatcgt tcggaaaaat
    22021 cgaatttgta tgatataata agacttcaga aaaaaaacaa aggagttatt atgaaaaaag
    22081 gagccctaac aggattactc ctgtttggta tgttttttgg tgcaggaaac ttgattttcc
    22141 cacctgcact tggtgtctta tctggtgaga atttctggcc agctatttta ggatttgttg
    22201 tatcgggtgt cggtattgca gtcattgctt tgattgtcgg taccttaaac cccaaaggtt
    22261 atgtacatga gatttctcgc aagatttcac cgacttttgc aacgatttat cttgttgcct
    22321 tgtatttggc tatcggtcct ttctttgcta ttccgcgtac agctacaacg tcctttgaaa
    22381 ttggtattgc acccttgttg ggcgatgcga atctgggtct ctggttattt ggctttacag
    22441 ctctttactt tgtggcagct tatctgattg ccctcaatcc atctcaaatc ttaaatagta
    22501 tcggacgtat tttaacccct gtttttgcga ttttgattgt gattttagtg gtgctaggta
    22561 ttgttaaata tggttctaca aatccacttc ctgcagccga tgcttactca gctgggcggg
    22621 cttttggtac aggatttatt gaaggataca acacccttga tgcccttgcc tcaattgcct
    22681 ttagtgttgt agcggtgaat accttaaaac aacttggttt ctcaagcaaa aaggaatatg
    22741 tatctaccat ttggtcagtt ggttttgttg tagctttagc tttctcagcg ctctatgttg
    22801 gtttggcatt tcttggaaat catttcccgg tacctgctga tgtcttggcg tctaaggaaa
    22861 tccacaaagg cgtttacgtt ttatctcaag caactcaagc tatttttgga ccaagtgctc
    22921 aaattttctt agccgctatg gttatcgtaa cgtgttttac aacgacagtt ggcctcatcg
    22981 tttccagtgg agaatttttt gcagaacgct tttctcgctt taactataag gtttatgcaa
    23041 cgctctttac cttgattggt tttggaattg ctaacctcgg cttgagcaag attattgctt
    23101 tctctatccc agttcttttg attctgtatc caattaccat ctgtatcatc ttgattacca
    23161 ttgtcaataa atttgtaccg ctttccactt atggtatgca attaactgtg ggagtagtga
    23221 cagctttgtc attggtagaa gtgttagcag gacaattcaa ctggactgtt gtttcaaaaa
    23281 tcatctcagc tctgccattg gctgaacaat cattagcatg gttattacca gctcttgtcg
    23341 gaatcgtcct ctctctgttc ttaccaaaca agcaggagag cgaagttttc gaaatgtaaa
    23401 aaaatgatac aaaacacttg catttgcagg tgtttttgtt ataataggac tgttgactat
    23461 gcacacatcc tgtgcaaccg cacgaatgcc gttgctctgc aaaaattaag ctcaaacgtc
    23521 gttgacttaa cttggtgaac ctaagttcta cctgtgtctg cgtcgcctag tctgaactta
    23581 atttttattg agcaagataa agtggttcgt cccacggtac taggcgagtc ttcacataaa
    23641 attcgggcaa gacccaaaaa tcataggagg tgcataatga gcacatatgc aatcattaaa
    23701 actggcggca aacaagttaa agttgaagtc ggtcaagcta tctacgttga aaaattgaac
    23761 gttgaagcag gtcaagaagt tactttcgaa gaagtagttc ttgttggtgg tgaaaaaact
    23821 gttgtgggta ctccactcgt agcaggcgct actgttgttg gtactgttga aaaacaaggt
    23881 aaacagaaaa aagttgttac cttcaagtac aaacctaaaa aaggtagcca ccgcaaacaa
    23941 ggtcaccgtc aaccttacac aaaagttgtt atcaacgcta tcaacgctta atcgcgtagc
    24001 ttgaagcaat cattacagaa attcggagga ataacatatg ttaaacttga atcttgctaa
    24061 cttgcaattt atggcccaca aaaaaggtgg aggttcaacg tcaaacggtc gtgattcaca
    24121 agcgaaacgc cttggtgcga aagctgctga cggccaaact gtatcaggtg gttcaatcct
    24181 ttaccgccaa cgtggtacaa aaatctaccc aggagctaac gtaggtcgtg gtggagatga
    24241 cactctttac gctaaagtag aaggcgttgt acgcttcgaa cgtaaaggtc gcgataagaa
    24301 acaagtatct gtttacccaa tcgctaaata agtcgtagcc tctagtatta gaggcttttt
    24361 ttaaaaaaat aaactacgaa cttttatgaa tgattcaaat aatgtatttg ttaaagattt
    24421 ctacttagag ttggtaacaa aaaaagaaca gtgcgaaagt aaaatttcag aactggaaat
    24481 tgagattggt aagcttaaag aaaagattgc tctttataac aaccaactca ccaaacattc
    24541 tgaacggaca gtttttaaac cagattattc tattgaagag aatagtgaac tttgggaaat
    24601 aagaacagat attgaaaaat taaagacctc cactcatgat tcgagtaaaa gaaccgaaga
    24661 atttacaaga ttattgctag aagaagaaaa ttatcaaaag caaaaagaat catatttcga
    24721 ggatgaaaat aaaaagagaa aattaaatat gaagaatatc ttttctaaga aaacctataa
    24781 ggactcagct aaaaagtaga aatttattgg agttatatat ttaaaatggc aaaaatattg
    24841 gacattctcc tattttttat tatattaata actttgttag tgtcgcttat aactatattt
    24901 atagaaatac cgactcaaat tcaaacaaca atagacatat taaatattgt aatgtttcct
    24961 tgtagttttg taattttatt aattgagttt tattataagt ttaataaaga aaagtttttt
    25021 aaatactatt tcaatttgct gttcggtata gcaattctta tttgtatatg tctcacaatt
    25081 gctttgttag tgcttgctga caaattttat gcaaatgaaa aaactcaaga ggtgattgcg
    25141 atacttactt tgttagtaag tgttccacaa agatggtacg gtcaagtttt tgaaacaaaa
    25201 gtaaaatcta atatgaggtg aaacaatgtc tgaaattaaa aatagagtaa gtgaaatttt
    25261 atcaaaagat ggaatgataa aaaacataat gtttgaatgt gttagagaat tagaaaattt
    25321 cgatagtgaa caacaaattg agtttttgga attattattt acaaattttg ggaaatttgt
    25381 aattgataaa gaagtgcaaa gtggagaatt tgttaccgag gaacagactg aagcatactt
    25441 ttcttcctcg ttggataaat ttgtagttgg tatatatcag gctattttga aacgtgctat
    25501 taaaaataat tttccagtta caacatttta cagagaaatc catgaattga ttttatcctc
    25561 gaaacttttg acagaggatt atcaaaaagc cctagctttg acacaattaa cacagcagaa
    25621 agaaatgcct tatctgaatg ttgatttcag tgtcctacaa gtaacaaaag acttttcaga
    25681 attcaatcaa gaaaatccag accttgtgga aatttttgat tatattttta gactaaattt
    25741 agaatataaa acggaatata gttcattatt attgaatgaa cttgaaaaat tctcgactaa
    25801 agaggataga gtgatttgtt tagcaaaaat attagatgtt cataaatttc aaatagaaaa
    25861 ggagttcgag caagcagagg aatagtaaag tataaccatg aatattcaac aattacgcta
    25921 cgttgtagcc attgccaata gtggtacttt tcgggaagca gcagagaaaa tgtacgtttc
    25981 ccagcctagt ttgtccattt ccattcgtga tttggaaaaa gagttaggtt ttcaaatttt
    26041 tagccgaact agttcaggaa cttttttgac acaaaaaggg atggaattct atgagaaagc
    26101 tcaggcttta gttaagggct ttgatcagtt tgagcatctc tatttgcaac ctgaggaagg
    26161 tgagaagact ttttcaattt caagtcagca ttatgatttt ctccccccat tgattacgga
    26221 gttctctcgt agccacccgc agtaccctca ttttcgcatt tttgaatcga ctacagtaca
    26281 gattttagat gaggttgctc aaggttatag cgagcttggt attatttatt tgaacgagag
    26341 aaatacaaaa ggaatcatgc agaaattgga taaacttcac ttacaagctg tagatttgtc
    26401 tgcatttcag actcatatct accttcgtga agatcatcct ttgacaaaga aagctgagat
    26461 tgatccagca gatttggtag gtctacctac cgtacggttc actcaagaaa aagaggctta
    26521 tctttattat tccgagaact tgattgatac gtcggattcc tcggttgtgt ttgatgtgac
    26581 agaccgtgct actttgaatg gaattttgga gcgtacggat gcctatgcaa ctggttcggg
    26641 ctatcttgat gacgagagtg tcaatggcat taccgtaatt cctctcaaag gaaaggtaga
    26701 caatcgcatg gtctacgtta aacgagctaa tgatgaactt agttcttgtg ccaaagactt
    26761 tattgaaacc atgcaggcat attttgataa gaagaaggat gaaaatgcgt aaaattggat
    26821 ttccattttt gatggtagta ttaattggtt tggaccagtt tgtaaaagct tggacagttg
    26881 ccaatattga attagatacg gtaacggaat ttataccagg attgatgagc ttagcttatc
    26941 taagaaatta tggtgctgcc tggtcgattt tacaaaatca gcagtggttt ttcacgattg
    27001 taacaattgc agctgtgact ggtttgattt ggtattatgt gaagcaaatc aagggcaacc
    27061 tgtggacctt atttagtctg gctttgatga ttgctggagc cctggggaat tttattgatc
    27121 gaattcgtct tggttatgta gtggatatgt tccatttgga ttttatcagt ttcccagtat
    27181 ttaatgtggc ggacatgtgt ctgaatgtcg gtgttggaat tttgttaatt tgtatcatga
    27241 aagaagagag taatggaagt aagagttgag gttggtggta ttcgtttgga taaggcattg
    27301 tcggatttga cggatttgtc tcgttcggtt gcaaatgaac agattaaggc tggtcaggtt
    27361 ttggtcaatg gacagcctaa aaaagctaaa tatagtgtgc aggttgggga tgtcctaacc
    27421 tatcaaattc cagaagtaga agaaatcgac tatgttgctg aggatattcc tttagagatt
    27481 gtctttcagg acgaggatgt tgctgttgta aataaacctc aagggatggt cgttcatccg
    27541 tcggctggtc acacgtctgg aacgttagtt aatgctctcc tttatcacgt aaaagatttg
    27601 tcaggtatca atggtgtctt gcgaccaggt attgtccatc ggattgataa ggacacatct
    27661 ggcttgctca tgattgctaa aaacgatgat gcccatacaa agcttgctgc tgaattgaaa
    27721 gataagaaat cccttcgtaa gtattgggcc attgtgcacg gcaatctacc aaacgatcgc
    27781 ggagtaattg aggcgccgat tggtcgttct gaaaaagacc gcaagaaaca agcggtgact
    27841 gccaaaggga aagaagcggt gacacgtttt caggttttgg agcgttttgg tgactacact
    27901 ttggtggaat tgaccttgga aacaggacga actcaccaaa ttcgtgtcca catggcttat
    27961 attggtcatc cggttgcggg tgatgaagct tacggcccaa ggaaaacact aaaagggcat
    28021 ggccaatttc ttcatgccag aacgcttgga tttacccatc cgcgaactgg cgaggttgtt
    28081 gaatttacgg cagaagcgcc agctattttt caggaggcac ttgaaaaact gcgcaaggct
    28141 gaataatagt atgaaaacct tatcatcttg cccatttttt caacaaatgc tatactagaa
    28201 catgaaaaat gttaaggaga gtaagaatgg aaactttacc aaattgtcca aaatgtaatt
    28261 ctgaatatgt ctatgaagac ggtgccctct tggtttgccc tgagtgtgct tatgagtgga
    28321 acccagcaga tgtagctgag gaagaaagtg gacctgttgc aattgatgct aacggtaatc
    28381 gtttggcgga cggcgatact gtgacgctta tcaaagattt gaaagtgaag ggtgcgccta
    28441 aggaccttaa acaaggtaca cgtgttaaaa gcatccgtat cgttgaaggc gatcacaata
    28501 ttgattgtaa aatcgatggt tttggtgcca tgaagctgaa atctgaattt gttaagaaga
    28561 tttaagagag agggctggtt aaccagtctt ttcctgtttt tgaaaggata ttatgaaaca
    28621 tcaaagtatt ttgttttaca gtagatgcct gttagctatt ttagccatca caggtaccgc
    28681 cttagaaatc attaaatatg gtatcggcat gctcatgtat tatacggtac aatctaattt
    28741 attggtatct ctgttcgctg tctatatggt ctatgccatg agtaaaagtg tggatttaca
    28801 gacgtcacgt tttcttcgga taaaggctgc tgtaaccatg tctatcatga ttacctgtgt
    28861 agtctatcac tttatgttgg cacctttggc agacgatttc tggcgacttg aaaatctact
    28921 ctgccattat attgttccct tatatttttt gttagatacc ctaatagtcg atcgtcagca
    28981 acagtacaag tggtttgacc cgatttggtg gacgcttttg cctgttctct acatgatttt
    29041 tggtctagtg aatggtcttt tcataaaaat tccaatccca gatgctaagg acagtccttt
    29101 tgcttatttc tttctcaatg tccctaagta tggttggacc tatgttttga cttatgctgg
    29161 agtcatcttt gtcgcctatc tagtctgcgg ttttctattg gcgggactaa aatccataaa
    29221 ccttaagact tcattgtctt ttggaaaaaa ttctcagtaa aatccgataa tttctatatt
    29281 ttttcagaaa aaaattgtca aggctgagat tttatgctat actctgctta ataaatcctt
    29341 taaaacctgt ccagagaggc agacaaggag caacgtgtta agcaggttag tctttaaatg
    29401 ctagcctata ttttcatagt ctccttgtgt aaaggggact tttttctata ttttttggag
    29461 gtcttatgaa gacaaaagaa atcgttgacg atatgaccat gaaacgggct attacccgta
    29521 tcacttatga aattatcgag cggaacaaaa atttggaaaa tattgttcta gcagggatta
    29581 aaacccgtgg ggtgttcatt gctaaacgta ttcaggaaag actgaagcaa ttagagggta
    29641 ttgatgttcc actgggtgaa ttggatacca aacctttccg tgatgatgta aaagtcgaag
    29701 aagatacgac aagcatgact gctgatgtga atgaccgtga tgttattttg gtagatgatg
    29761 tgctctatac aggccgaacc attcgtgcgg ctattgacaa catagtgtcc ttgggccgtc
    29821 cagctcgtgt tagtttagcg gtacttgtgg atcgtggaca cagggagttg cctattcgag
    29881 cagattatgt tgggaagaat atcccaacta gccgttcgga agaaatcatc gttcacatgg
    29941 ctgaaatcga tggtcaggat tctgtcctcc tagtcgaggg agcttagtcg tttatttttc
    30001 aattcaatat tctacatttt atatcctaaa ggcaggtatc gtcatgacaa ttacaaatgg
    30061 taaagtttca ctcaaacact tggttacaat ggagaccctc tcaaatgaag aagtattggg
    30121 actcattcaa cgtggtattg cttttaaacg cggtgaaaag gtagagttgg atcggaagta
    30181 ctatgcttct aaccttttct ttgaggattc aactcggacg cataagtctt ttgaaatggc
    30241 ggagcttcgt ttggatatgg gaatgattga ctttgatgct cgtaccagtt cggtcaataa
    30301 gggtgaaacc ttgtatgata caattttgac catgtcagct ttaggggtcg atatctgtgt
    30361 cattcgtcac tcggaagtgg attattacaa gcagttgatt gatagtccta ccattcaaac
    30421 ttcaattgtc aatggtggtg atggttctgg gcaacatcca agtcaatcct tgcttgactt
    30481 gatgactata tatgaagaat ttggaacttt tgaaggcttg aaaattgcca ttgcaggtga
    30541 tattacacat tcacgggttg ctaagtccaa tatgcaaatt ttgaagcgtc tgggagctga
    30601 gattttcttt gctggaccgg aagaatggta cgcagaggaa tttgatgtct atggtcagca
    30661 tttgaatatt gatgatattg tggaaacggt agatgtactg atgttgctcc gtgtgcaaca
    30721 cgagcgtcat gatggtgatg gtggtttttc taaagaaact tataaccgtt tgcatggttt
    30781 aacagaggag cgctacaaac gtttgaaaga tagtgctatt gtcatgcatc cggcccctgt
    30841 taaccgtgat gttgagattg atgattctct agttgaagca cccaaatcac gtattgtccg
    30901 tcaaatgcag aatggtgtat ttgtccggat ggcgattttg gaagcaattg tcaatggcaa
    30961 ggcttaaaag taagctgttc aggtatctta gaactgagca gttagaaatt tgttagactt
    31021 atcttattta atgtcgctca gagaggcgac gaatagaaag gcaagggaca ggtcaatggt
    31081 tgcgagcaac ttatttccca ctgcgctgag atgttgacac ctgctcttag aaatggtgat
    31141 atactttaag gctatccctt gcactagttt gtacagtcaa ttaatgtcga attgactttc
    31201 aaagcgtcgg tcagagcaag tcggacttta tgctaaggca tgtgtccttc tacgcaaagt
    31261 cctatggggc ctttgctaac gctgacacta gccgtaaggt ttacctaata tcgagctaaa
    31321 ccttactgcg tcggactatt atttaattct atccggagag atagaaaata gaaaggagag
    31381 atacaggttc gagtttctta ttcgaacacg ccctaaggac tgtgcgaaaa agataaacgt
    31441 cgtcttgatg cttgaagcat cagcgtcgcg tttcctattt tcgctttgtc ctcttaacgg
    31501 gctttgtatc atacattatg ccaaaacgta cggatattaa gaaaattatg gtgattgggt
    31561 ctggtccgat tattatcggt caggctgcgg agtttgatta tgctgggact caggcttgtt
    31621 tggctttgaa ggaagaaggc tacagtgtcg tcttggtcaa ttcaaaccct gcgactatca
    31681 tgacagataa ggaaatagca gacaaggttt atattgagcc gattacgctt gaatttgtca
    31741 cacggatttt acggaaggag cgtccagatg ctctcttgcc aaccctgggt ggtcagactg
    31801 gtctcaacat ggccatggaa ttgtctaagg ctggtatttt agatgagctt ggagttgagt
    31861 tgttgggaac taaactgtct gcaatagatc aggcagagga ccgcgacctc ttcaaacaac
    31921 tcatggaaga cctcaatcag cctattcctg agtcaacgat tgtaacgaca gttgaagaag
    31981 ctttggaatt tgctgctgaa attggttacc ctgtcattgt tcgaccagcc ttcacattgg
    32041 gtggtactgg cggtggtatg tgtgccaatg aagaagaact gcgtgaaatt gcagaaaatg
    32101 gtctgaaact gtcgccggtg acccagtgtt tgattgagcg ttcgattgct ggtttcaaag
    32161 aaattgaata cgaagtgatg cgcgatgcgg ctgacaatgc cttggtcgta tgtaacatgg
    32221 aaaactttga ccctgtaggg attcatactg gagattctat cgtatttgcc ccaacacaga
    32281 cgctttcgga tattgaaaac cagatgctac gcgatgccag tctaagtatt atccgagccc
    32341 tcaaaatcga aggtggctgt aatgtgcagt tggcactaga tccacatagt ttcaaatatt
    32401 atgtcattga agtaaacccg cgtgtgtccc gttcatctgc cttggcatct aaagcgacag
    32461 gttatcctat tgccaaattg gcagcgaaaa tcgcagttgg cttaaccttg gatgaaatgg
    32521 tcaaccctgt tacaggaaca acctatgcca tgtttgaacc tgcacttgac tacgttgtgg
    32581 caaaaattcc acgtttccca tttgataagt ttgaaaaagg ggagcgccgc cttggaacgc
    32641 agatgaaggc aactggtgag gtcatggcca ttgggcgtaa tatcgaagaa agtctgctca
    32701 aggcctgccg ttctttagaa atcggtgtct atcacaatga aatgccagaa ctcagccaag
    32761 tgacagatga tcaattggtt gaaaagattg tcaaggcaca ggatgatcgt ttattctatc
    32821 tttcagaagc ccttcgacgt ggttatacag tagaagaact ggctcaattg acgaagattg
    32881 atcttttctt ccttgataag ctgcttcata tcttagaaat cgagcaggaa ttggcaacga
    32941 attttgataa tattgattta ttgaaaaaag ccaagaaata cggttttgca gaccgcaaga
    33001 ttgcggaact ctggggacgg acagaatcct acattcgtca actgcggaca gagtacaaaa
    33061 ttgtccctgt ttacaagatg gtggacactt gtgcggccga atttgaaagt gctacacctt
    33121 atttctattc aacttatgag tgggaaaatg agtccatccg ttcggagaaa gaatctgttt
    33181 tggtgctggg ttctggaccg attcgtatcg gacagggtgt agagtttgac tacgcgacag
    33241 ttcattctgt taaggccatt caggcagcgg gctacgaagc catcattatg aactcaaacc
    33301 ctgaaacggt ctcaaccgac ttttcggttt cggacaagct ttacttcgag ccgttgacct
    33361 tggaagatgt cttgaatgtg attgaccttg agaagccaaa aggggttatc gttcagttcg
    33421 gtggccagac ggctatcaat ttggcagagc cattggcaaa agcaggtatt ccaatcttgg
    33481 ggacacaggt ggcggatttg gatagagctg aagacaggga tttatttgaa aaagccctga
    33541 aagacctagg gattccacag ccaccaggcc aaaccgcaac taacgaagag gaagctctag
    33601 aggcggcccg caaaattggt ttcccagtac ttgttcgtcc atcatatgtc ttgggcggtc
    33661 gtgctatgga aattgtcgaa aatgaagagg acttacgttc ttatatgaga actgcggtca
    33721 aggcttcgcc agagcaccca gttttggtgg attcttatat cgtcggtcgt gagtgtgaag
    33781 tggatgctat ttcagatggt aaggatgtct tgattcctgg tattatggaa cacatcgagc
    33841 gcgcaggggt tcactctggt gactcgatgg ccgtttatcc gccacaaacc ctgtctaaag
    33901 aggtgcaggc gaccattgca gactacacca aacgcttggc aatcggtctc aactgtatcg
    33961 gtatgatgaa tatccagttt gtcatcaagg atgaaacggt atatgtgatt gaggtcaatc
    34021 ctcgtgctag tcgtacggtg ccattcttgt ccaaagtcac agacattcca atggctcagg
    34081 ttgcaaccaa attgattttg ggacaaagcc ttgcggaact tggctaccaa gacggtcttt
    34141 atcctgagag caagcaagtg cacgttaaag caccagtatt ctcctttact aaacttgcca
    34201 aagtagatag tttgcttgga ccagagatga agtcaactgg tgaaattatg gggtcggact
    34261 tgacgctgga aaaagcactg tataaggctt ttgaagcaag ctaccaacac ctgtctgagt
    34321 ttggtaatgt agtctttacc attgcggatg aagacaagga agaagctctt ggacttgctc
    34381 aacgcttcca tgaactaggc tatggtctgc tggctacggc aggtacagcc gcatatctgg
    34441 ctgaaaatgg actatccgtg acaactgttg gcaaattggg cgacgcagct tgtcatgata
    34501 ttccaagtct tgttcgagca ggtaagattc aggctattat caatacggtt ggtaaaaaac
    34561 gggtggcaga tggtgacggt caagtcattc gaagctctgc tattgaagga ggaattccac
    34621 tctttacagc ccttgataca gcagaagcta tgattaaggt gctgaagagc cgtagcttca
    34681 tgacacaggc tatatagaag atactatcag gatgagcttt gagttcgtcc tgattttttg
    34741 atatactgaa gagtatgaaa atgattgtaa caactagtct tgggatggat gaggggctgg
    34801 tctatagggc tagacggatt gccagtgaat tgggaattga atacaaggaa agaaagaagc
    34861 agtcggttgg aaaaatgtta ggtacctacg aggctatctt ggttctttat aaggataaat
    34921 tgatactaga gcagaggggt gggcaggttt tatttttcca ccctgacaca gccatcttgc
    34981 gaatcaagtc tgtaagggat ccgcttttgg aattgatagg acctgataaa cataccgtcc
    35041 tggactgtac catggggcta gcttctgata gcattgtgtt agcaagtgcg ggtcatcagg
    35101 ttactgcttt ggagagttct ctgcttattc attttatggt gagccgaggt ctgaaagagt
    35161 ttgatagtgg caatgaagcg gttaatcaag ccatgcggtc tattcagact atttggacag
    35221 acagtttgac ttacttacag tcacaagcag accagtcagc cgatgtgatt tatgctgacc
    35281 ccatgttttc gcaggagatt acggaatcgg ataatcttga tggactaaaa ccctttgcca
    35341 attactcagc tctttctgaa gaatttttgg tcgaagccaa acgagtggct agaagaaaaa
    35401 ttattattaa ggctcatttt agagatcagg catttgaaaa atttggtttt agacgtcatg
    35461 tcagacccaa tcaaaaattt cactacggag aaattatttt ggaggaggaa gtatgaaaat
    35521 tatcgtaaca ggctttgatc cctttggtgg cgagcctatt aacccagcct tggaaacaat
    35581 caaatctcta cctaagacca ttgctggtgc agagattatt cttgtagaga ttccgactgt
    35641 ttttgacaag gctgcggatg ttttagagga gaaaatggca gaacatttac ctgatgcggt
    35701 actatgtatt ggtcaggctg gtgggcgagt tgatttaact cctgagcgta tagccattaa
    35761 ccaagatgat gcacgcattc cagacaatga agggcaacag ccaattgata gaacgattcg
    35821 agaagatggt cagcctgctt atttctccac cttacccatc aaagcaatgg ttgaagcgat
    35881 tcataggatt gggcttccag cttctgtttc taatactgct gggacctttg tctgcaacca
    35941 tctcatgtat caagctcttt acttggcgga gaaacaattt ccaaagacca aggccggttt
    36001 tctccatatt cccttcttgc cagagcaggt tgtcgacaaa ccaggactgg cttccatgtc
    36061 tttgaacgat attgtaagag gagttgaagt agctatagga gcgattgttg aatataggga
    36121 taaagaggat attaaaaagg gtggtggcag tacacactga tgaaaaatat tatggaagca
    36181 agaaaacgtg tagaggaaat ggaaaaaaca tttaacagac agctagagct gaaccagtcc
    36241 ctttccgata gtatggcaca gctcaaccag gaacaatcga cttatttaca gttattagat
    36301 tattaccaga gccagaccta tatggaagat cttgaattat ctaataaggg ttatttcaat
    36361 ggtattcctt gcggagtatt gagtgaagat ggagtctata atttattgtt tgaccgtaca
    36421 aatctagcaa gtcaactgag agaactagca gatatgctcg aacaataaaa ttttttaaaa
    36481 cctgtcaagt ttttttcttg acaccctgct aaagtgtggt ataatagaac atgtgctaaa
    36541 tagctctgct atttcaccga ataaaaatac aaagaaaaga gaatatttta aaatggcagt
    36601 aaaaatccgt ttgactcgta tgggttctaa aaagaaacct ttctaccgta tcaacgttgc
    36661 agattcacgt gcaccacgtg atggtcgttt catcgaaact gttggtactt acaacccact
    36721 tttggctgaa aactcagtaa ctcttaaaga agagcgtgta cttgagtggt tggcaaaagg
    36781 tgcacaacca tctgatacag ttcgtagcct tctttcaaat gctggcgtat tgaagaaatt
    36841 ccacgagcaa aaattctcta aataagaaca gtaagcgaga acacttatgg acatgattga
    36901 aaatctcatt attgcgattg tgaaaccttt gatttcacag cctgatagct tgacaattaa
    36961 aattgttgat acacctgaat ttttagaata tcatttggat ttggataaat ctgatattgg
    37021 acgtatcatt gggaaaaaag gacgcacaat ttctgcaatc agaacgattg tctactctgt
    37081 tccaacaagt gataaaaaag ttcgtttagt gatcgacgag aaagaataga aagtcaccat
    37141 ttggtggctt ttaacgttga caaaggggcc tagccccttt ttaacatata gaaaggaaga
    37201 aatgatgaat ctgatttgga cctatttgaa aaaatacccc aagtggattg ctttggactt
    37261 gttgggggct ttcctattca ttgtagttaa cttgggcttg ccgacatttt tggcaagaat
    37321 gattgaccaa gggattacaa aaaacaatgt tgatcaatta tatttctggg caggcatgat
    37381 gggcttgatt gttttgctcg gtattgttgg tcgagtgaca cttgcctatg cagctggaaa
    37441 gttgactact aacatcgtca aagatattcg aaatgatctg tatgagaaaa ttcaggacta
    37501 ttctcatcat gaatatgagc agattggtgt ttcttctcta gttgctcgta tgacaaatga
    37561 tgcttttgtt cttatgcaat tctctgaaat ggtgttgaaa ctaggtatta ttacaccctt
    37621 gatgatgatt gcttctgtca tcatgacctt ggtaaccagt ccgagcttag cctggacagt
    37681 agcagtagcc atgccttttc tggtttttgt tattttctat gtggcaacca aaactcgtcc
    37741 tctctctgaa aaacaacaga aacgattgga tactatcaac cagtatgttc gtgaaaatct
    37801 catgggtttg cgggtcattc gtgcctttac tcgtgaggag tttcaagagg agcgctttga
    37861 gtcggtcaat gaggaatata ccgatatttc caaaaagctc tttaatctga ctggattgac
    37921 agagcctctc tttgtccaga ttatcattgc tatgattgtg gccattgtct ggtttgcttt
    37981 ggaacccttg aaaacaggca gtctgcaaat cggtgatttg gtagccttta tcgaatatag
    38041 tttccacgca cttttctcat tcttgctctt tgccaacttg tttaacatgt atccacgtat
    38101 gtcggtatcg agccaacgga ttcaggaagt cttggacatg cctatctcta tttctaagaa
    38161 tgaagacggc ataactgaaa cagatactcg tggttatttg gaatttgaaa atgtaacttt
    38221 tgcctatcct ggtgaaacgg aatcgcctgt tctccacaat atttcattta aggctaagcc
    38281 tggagaaacc attgccttta ttggttcaac aggttctggt aagtcttcct tggtcaactt
    38341 gattccacgt ttctatgatg tgacacttgg tcgtatcttg gtggacggtg tggatgtcag
    38401 acgctacaat ctaaaggcac tccgcagcaa gattggcttt attccgcaga aagctctgct
    38461 atttaccgga actatcgcgg aaaacttaaa gtacggtaag atggatgcta gtcttgctga
    38521 acttcatgat gcgacggatg tggctcaggc taaggagttt atcgagagta aggaagaaaa
    38581 attcgacacc catctagcag aaggcggaag caacctgtca ggcgggcaaa agcaacgttt
    38641 gtccattgca cgtgctattg tcaaacagcc cgatatttat atttttgatg attctttctc
    38701 agccttggat tataagacgg atgcaatttt gcggagtcgt ttgaaggaag tgacggaaaa
    38761 tgcgacggtg ctaattgtgg cacaacgtgt cggaactatt atggatgctg accagatcat
    38821 cgtgctgaac gaaggtgaaa tcgttggccg tggcacccac aatgaattga tggaaagcaa
    38881 tgagatttat cgagaaatcg ccaattctca gcttaatcgt caatcgttaa cagaagaata
    38941 ggaggaatta tgaagaatag atcagtattt acccgtgttt gggactattt gcgtcgttac
    39001 aaatcttctg tatttttagc cgtttttcta aagaccatta gcgcagttat gaatgcctta
    39061 gaaccctttg tactggggct tatcattaca gaattgacca agaatttgtt agacatagca
    39121 aatggagtag aaggagcgca gattaactat tcctacattg ctatcatgct tgccatctat
    39181 gcccttcgcg cccttctata tgaaatcggt gcctacggtt ctaactattt tatgaccaag
    39241 gcagtgcagg gagcaactaa ggaactacgt caggatttga gccataaaat taacaagatt
    39301 ccagtatctt attttgataa gcaccagtat ggtgacctgc tggggcgatt taccagtgat
    39361 gtggagactg tttcaaacgc cctgcaacaa agttttctcc agctagtcaa tgccgttctg
    39421 accctctctc tagccatttt catgtgtttc tggttggatg tatccctagc acttgtagtc
    39481 gtaaccttgg ttccagtgac ctattttggt tctaagtttg tcatgggcaa atcccagcca
    39541 tatttcaagc agcaggctga tgccctaggt cgtttgaacg gctttgtcca agaaaatctc
    39601 acaggcttca acgttctcaa actttacggc cgtgaagaaa tttctacaga agagtttcgc
    39661 cagataactg ctgacttgca ggaagttggt ttcaaggcta gtttcatgtc tggtttgctc
    39721 atgcctctag ttcacggctt ctcaaacatc gcctacgttg tcgtcgccct gctatctgga
    39781 ttgaaagttc ttgcaggtac attgacggtc ggtaatatgc aggccttcgt ccaatacgtc
    39841 tggcagattt ctcagccagt ccaaaccttg acccagttgg caccacagtt gcagtctgcc
    39901 aaatcctccc ttgaacgcat cttttcagtc ttagatgaac ttgacgaaga agacgccaat
    39961 gcactagagt tgacagaaag tctgacagga caagtcagct ttgaacaggt tgaatttggc
    40021 tattcagaag ataagccgct tatccgtaac tttaatctgg atgttcaacc cggtgagatg
    40081 gtggccatcg ttggaccaac gggggctggt aagactaccc tcatcaacct tctcatgcgt
    40141 ttctatgatg tcacatcagg tgctatcaag gtagatgggc aggatattcg aaatctttcc
    40201 cgtcaatcct accgtagtca atttggtatg gtattgcaag atgcttggct ctacgaaggg
    40261 accatcaagg aaaacctgcg ttttggacgc ctggatgcga cggatgagga aattgtggtg
    40321 gctgctaaag ctgccaacgt tgaccatttt atccgtaccc tgcctggcgg ttataatatg
    40381 gaaatgaacc aggaatccag caatatttcc caaggtcaga aacagctttt gaccattgcg
    40441 cgtgccttgt tggcggatcc tgctattctg attcttgacg aagcgacttc ttcagttgat
    40501 acccgtttgg aactcctgat tcaaaaagcc atgaagcgat tgatgaaagg acggacaagt
    40561 ttcgtcattg cccaccgctt atcaaccatt caggaagctg ataagatttt ggtcttgaaa
    40621 gatggacaga ttatcgaaca aggtaaccat gaaagtcttt tggcagacaa aggtttctat
    40681 tataatcttt atcaaagtca gtttagtgaa tccaaataaa acgaactccc ttgtcagtga
    40741 cagggagttt tctcatatac atgtttgtaa aaattaatag gaaatttcgg ataatagccc
    40801 ctcagcggta gtggttggga ggatgcggac acgattgaga gtcagtaatc cgtcactagc
    40861 agaagccaag ccgttgttag tagtcacacc aagtttgtag ccagcttgtt cagttaaggc
    40921 tactgtatct gctgagtatc gtccaccagg gtaggcgata gcgatggttt cctgatttaa
    40981 ttggctgtca agataggctt tagaggaagt aagttcattt gtttgatcct cgatagaact
    41041 atactctaaa tcagggtggt tgacggtatg cccttggaag gagagccctg cggtctgcat
    41101 ttccttgatt tgttcaagag taaggtgccc tgcttgtcca tattcagtaa atcctgtaat
    41161 gacattgttg gttgccttca tttgatattg cttaagcaat gggtaggcat aactataaaa
    41221 atcccagagg ctatcgtcaa aggttagcca gacagccttt ttgccagcag gaaggacatt
    41281 ttctgtcaat accttataag cctcttcagg tgataaagta tagtaacctg catcttgcaa
    41341 tgcttttaga tgactttcga aagtcgttgg atctacgata agattcgcat tagcttcttc
    41401 ctcaggagcc attacgtgaa tggcatgata catgaggatt ggaagtttga taggttcagt
    41461 ttgttgttcc caaatgattt ctgtttgtac ttcactactt tctgaagtca taacactcga
    41521 actggttgtt gtctctaccg ttaaagcttt ggaatcactt tgttgcttag atggctgttt
    41581 tagaaagatt agaaaaatag atagtagagt cactactaat aatgcgatac caagtagcat
    41641 tggcacaagt tgtttctttt gtgtgcggct tcgacgggct cttcttgaat gtttcattat
    41701 cttatctccg taatcatata ttaaaacaat tataacaaat tttttgccaa atagtcagaa
    41761 tatttgttat aatgggagaa atacatttta aaggagagca catggtagtt aagataggat
    41821 tattaggatt tggaaccgtt gcgagtggtg tgccattttt attagaagaa aaccaggaaa
    41881 aaatagagaa agccgcgcat gatagtattg aagttgctaa ggttttggtc aaggatgaag
    41941 cagaaaaaga ccgtctcttg gctgcaggtc atgactatca ttttgtgaca aatattgacg
    42001 agattttagc tgacgaagat atcgccattg tagttgagct gatgggacgt attgagccag
    42061 caaaaacatt tattacacgt gccttggaag caggcaagca tattgtaaca gccaataagg
    42121 atttacttgc tgttcatggt agcgaattgc gtgccttggc tgaagagaaa ggtcttgcgc
    42181 tttattatga agctgcagtt gcaggtggta ttccaatctt gcgtaccttg gttaactcat
    42241 tggctgctga taaggtgact cgtatcctcg gtgtattgaa tggtacttca aacttcatgt
    42301 tgactaagat ggttgatgaa ggctggactt acgaaaaagc tcttcaaaca gcacaggaac
    42361 ttggttatgc agaatctgac ccaacaaatg acgttgaggg aattgatgca gcttacaagg
    42421 ctgtaatcct cagtcaattt gctttcggga tgacagttga ttttgaacac gtagcacaca
    42481 aggggatttc aaatatcacg ccagaagatg tagcagtggc acaagagttg ggctatgtca
    42541 tcaaacttgt gggtgatatt caagaaacta cctctggtat tgctgccgaa gtatctccaa
    42601 ccttcctacc gaaaaatcat ccacttgcaa gcgtgaatgg tgtgatgaat gctgtatttg
    42661 tcgaatctat cggcatcggc cagtctatgt actatggacc gggcgctggg caaaaaccga
    42721 ctgcaacaag tgttatggct gacattattc gtatcgttcg tcgcttgaaa gacaatacta
    42781 tcggcaaagc cttcaatgaa tacagccgcc cacttcaatt ggcagcccca agcgatgtga
    42841 agagcgaata ttatttctca attgatgcgc ctgataaaaa tggaaaaatg cttcgtttag
    42901 cagaaatctt caattctgaa gaaatttcct tcaagcaaat tctgcaacaa gctgcagatg
    42961 gagaaacagc ccgtctagtg attgtgaccc atgaaatgag taagactcag ttggaaaatg
    43021 taacagacaa attgagtaaa gaaacagact ttactgtctt aaataccttt aaagtactgg
    43081 gagaataagc aatgaaaatt attattccag caacttcagc taatatcggt ccaggatttg
    43141 attcagtagg tgttgccctt tcgaaatatc taacgattga agtgtttgaa gagactgatg
    43201 aatgggtgat tgagcacaat cttgaacatg ttccatcaga caagaacaat cttttgatca
    43261 agacagcttt aaagattgaa aaaggattgc ggccgcatcg tatcagaatg attagtgata
    43321 ttcccttggc acgtggtttg ggttcatcca gttccgttat cgtagctggt atcgaattgg
    43381 ctaatcaatt agcaggtttg aatatgacag cggatgaaaa attgctcaaa gcgacagaaa
    43441 ttgaaggaca tcctgataat gtagccccag cgatttttgg taatttagtc atctctagct
    43501 atgttaataa gagagtacag gcagttgtaa cagaattccc agaagcaagt tttgttgcct
    43561 ttatcccaaa ttatcctctt cgtacagttg agagcagggg tgtgctgcca tctcagatgg
    43621 ggtacaagaa agcagtggct gctagtgcca ttgcaaacgt tgctgttgcc agtttgatgg
    43681 caggtgatct ggaaaaagct gggaaatcaa ttcagtcaga tatgttccat gaaccattcc
    43741 gtcagctact tgttaaggag ttttgtccaa tcaagcaaac tgcacaggag ttgggagcct
    43801 atgcaaccta cttgtcaggt gccggtccaa cagtgatggt attagcgccc aaagataggg
    43861 aggacgctat tgttctagca ttagaggaac taaatctaga cggaactgtc caccgccttc
    43921 aagtagatac caaagggatt gctattgtat agatagtgag aatctatcat ttgcaaaact
    43981 aaacatgttt atttattgga gttcgccatc gctactatat gcggtaggaa gggaactcct
    44041 ttttttgtgc attccattct ccaattcaaa atattggggc aaattaattt ggcttgtgaa
    44101 agtatttttg ttgaatttta ttcgttttct cctgtaattt ttggtataat aaatcctgta
    44161 tatcttaaat tgaaatgaga aggttatgaa agataaaatt aggcttgaat tagaaggcat
    44221 cgatattcga ttcgatgaac ctttaaaaga atatacctat acaaaagtag gaggagctgt
    44281 tgattatcta gcttttccgc ggaatcgtta cgagattgtt cgtatagtag aatttgctaa
    44341 acgcgaaggt attccatggc aagtattagg aaattcaagt aatatcattg tccgagatgg
    44401 cggtattcgt ggttttgtta tccgtatgga taaacttaac tccgttactg tatcaggata
    44461 caccattgaa gcggaagcag gtgccaatct gattgaaaca acaaaagtcg cacttttcca
    44521 ttctttatca ggatttgaat ttgcttgtgg tattccggga agcattggtg gtgctgtcta
    44581 tatgaatgca ggtgcttacg gaggtgaagt agcacacatt ctagtttcag cgcagatttt
    44641 gactccagca ggttatgtcg aaacgttgga ccatcgcgag ttgcgatttg gctaccgttc
    44701 ttctattttg caggaaaacg gtgcgattgt tttgtctgct aaatttgccc tcaagccagg
    44761 aaatcatacg gttattcaac aagaaatggc tcgtttgaca catttacgcg agctcaagca
    44821 acctttggaa tatccatctt gtggttcagt cttcaaacgt ccacttggtc actttgcagg
    44881 tcagttgatt atggatgcgg ggttaaaagg ttatcgaatt ggtggtgttg aagtatctga
    44941 aaaacacgca ggttttatgg tcaatgtcga caatggtaca gcaaaggatt atgaaaatct
    45001 gattgcacat gtgattgatg ttgttgaaaa atcttcaggc attacgctgg agagagaggt
    45061 gcgtattatc ggcgacccat ctgatacata gtctttcagt ttatctttta ttacgtcgtt
    45121 aactcgcttt gccgtacttt agtactgtct gcagctcgtt gcctagtact aaaagcaaac
    45181 tgaaagacta aactctagcc attaggctct tacaaaaaag aaggaattta tgagaattga
    45241 aaaagccaat tattgaattt aagaacgttt caaaagtatt tgaagacagt ggaacaactg
    45301 tattaaagga cattagtttt gaattggaag aggggaaatt ttataccctt ttaggagctt
    45361 ctggttcagg taaatcaacg attttgaaca ttattgctgg tttattggat gcgagttcag
    45421 gtgatattta tctggatggt caacggatta atgatgttcc gactaataaa cgggatgtcc
    45481 atactgtttt ccagtcctat gcccttttcc cacatatgac tgtctttgaa aatgtggctt
    45541 ttcctcttaa attacgaaag gttgacaagg ctgaaatcga acgccgtgtg acagaagcct
    45601 tacaaatggt ccgactttct ggttatgaaa atcgttccat tcagaaattg tctggtggtc
    45661 aacgccagcg ggttgctatt gcacgtgcga ttatcaacca gcctcgcgtt gtcttgctag
    45721 atgaaccact ttctgccctg gacttgaaac tccgtacaga aatgcagtac gaactgcgtg
    45781 aattgcaaca acgtctagga attacctttg tcttcgttac ccatgaccaa gaagaagctc
    45841 tggccatgag tgactggatt tttgtcatga atgaaggtga aattgttcag tcaggaacgc
    45901 ctgtagatat ttatgatgag ccaatcaacc attttgttgc tacctttatt ggcgagtcca
    45961 atatcctgtc tggtcgcatg attagagact atttagttga atttaacggc aaacgcttcg
    46021 aagctgtgga tggtggtatg cgtccaaatg aagacgttca aatcgttatc cgtccagaag
    46081 acttgcagat tacacttcca gaagaaggta aattgcaggt aaaagtagat acccagctct
    46141 tccgtggggt tcactatgaa atcattgcct acgatgattt gggcaatgaa tggatgattc
    46201 actcaactcg taaagctatt gtgggagagg tcatcggtct agactttgag ccagaagata
    46261 ttcatatcat gcgtcttaat gaaacagagg aagaattcga tgcccgtatc gaagaatatg
    46321 tggaagtgga agaagtagaa gatggcttga ttaacgccat tgaggaggaa cgcaatgaag
    46381 aaaacctcta ggctttttgc aattccctac gccctatggg tctttctctt tgtactagct
    46441 ccagttgcct tgattatctt caaatctttc tttgatattc atggcaattt cactttggcc
    46501 aattaccaga cctattttaa ctcgccaaat atgacctatc tgcgaatgag ttttaactcc
    46561 attttttacg caggtattat tactctggtc acgcttttgg tttcctaccc aacagcctat
    46621 ttcttgacca aactcaagca tagacagctc tggctcatgt tgattatctt gccaacctgg
    46681 gtcaatcttt tgctgaaagc ctatgccttt atcggtattt ttggtcaaca tggttctgtc
    46741 aaccaattct tagagtttat tggcttgggt gcccagcaaa ttcttttcac agatttctcc
    46801 tttattgctg ttgcagccta tatcgagatt ccgtttatga ttttgccgat ctttaacgct
    46861 ttggatgatt tggataaaaa cctaatcaat gccagtcgtg atttgggggc aactccttgg
    46921 cagaccttca caaaagttat ttttcctctt tccatgaacg gtgttcgttc aggtgttcaa
    46981 gcggttttta ttccgagttt gagcctcttc atgttgaccc gtttgattgg cggtaaccga
    47041 gtgataacct tgggtacagc aatcgaacaa catttcctga ccacacaaaa ccagggaatg
    47101 ggttcaaccg tcggtgtggt cttgattttg gccatgctct tgattatgtg gatgacgaaa
    47161 gagaggaaga aataatgaag aaatttgcaa atatctactt aacagttgcc tttctccttc
    47221 tctacttgcc gattttttat ctcattttct atgcctttaa tgaaggtggg gatatgaatg
    47281 gatttacagg ttttaccttg gagcattttt catctatgct tggcgatagc cgactcatgc
    47341 tgattctggc tcaaaccttc ctattagctt ttttgagttc tttgattgcg acccttatcg
    47401 gaactttcgg tgccatctat atctatcagg caaaacctcg ttttcaaaat gcactcttgt
    47461 ctgtcaataa tatcttgatg gtcgctccag acgtcatgat tggggcaagt ttcctaattc
    47521 tctttaccat gattggtttc cagctaggct ttgtctcagt attgctcagt catattgcct
    47581 tttctattcc aatcgtagta ttgatggttt tgccacgctt gaaggaaatg aatgccgata
    47641 tgatttcagc agcttatgac ttgggtgcaa ctcagccaca aatgctgaaa gaaatcatgt
    47701 tgccatacct aacaccagcc attattgcag gctacttcat ggcctttacc tactccttgg
    47761 atgactttgc cgtgacattc tttgttacgg gaaatggtta ctcaaaccta tctgttgaga
    47821 tttattctcg ggcacgtcaa gggatttctt tggaaatcaa tgccttgtca acccttgtct
    47881 tccttttctc tattctactg gtcgtgggtt attatttcat ctcacgtgaa aaggaggcca
    47941 actaatgaaa cgattgtatt cattttttgt aggtattgta gctattattc ttgttttatg
    48001 gggaattagt tcaaaattag aagctgattc aacccaaggg acaactgata aacttgtcat
    48061 ctataactgg ggagattata ttgacccaga attgctggaa gaatttacgg ctgaaacagg
    48121 tattcaggtg gattaccaga cctttgattc caacgaatcc atgtacacta aaatcaagca
    48181 gggaggaact acctatgacc tggccgttcc ttctgagtat atgatttcca aaatgacgga
    48241 agaagatatg ctcgtgaaac tagataaatc aaaaattgaa ggtttagaga atatcgatcc
    48301 acgatttatg ggacttagct ttgacaagaa caatgactat tctattccat atttctgggg
    48361 aaccttgggg attgtttaca atgaaactat ggttgacaat cctcctcaag aatgggaaga
    48421 tttgtggtca gaagaatacc gtgacaatat catgttaatc gacggtgttc gtgaggtcat
    48481 gggcttcggt ctgcaatctt tgggttacag cttaaactct aaaaatcctg cagagattga
    48541 aaaagcagct gaacatctat ataatttaac tccaaatgtc aaagcaattg ttgctgatga
    48601 gataaaaggt tatatgatcc aagatgcggc agcaattgct gtttcgttct caggcgaggc
    48661 gagtgaaatg ttagatggaa atgaaaatct gcgctatgtt gtaccatcaa aaggttctaa
    48721 tctttggttc gataacatgg tcattccaaa aacagcaaaa aatattgatg gagcttacgc
    48781 ctttatgagt tttatgcttc gtcctgaaaa tgcgcttcgc aatgcagaat atgttggtta
    48841 ttcaacacca attcctgcag ccaaggctat gctggatgag gagactcaga acgatgaatc
    48901 tttctatcca tctgaagaaa cgatgaagaa gatggaagtt tatgataatc ttggaccaga
    48961 gatacttgga atgtataatg acctctatct ccaattcaag atgtatcgga aatagtctga
    49021 ttggacaggt agcaatataa ataaaagaat gggagtgagg ttctttacta agtacttatt
    49081 gctcctattt tttggttata catactatag aaaggaaggg aaataccaat ggaaaatcac
    49141 cggaaagaag ttagttttat ttctcaatca atcctctact cggttctgcg tggtagttta
    49201 gttggcattg tcgctggttt agtggtcgtt gcatttcgct tagccattga aaaactattt
    49261 tctgtcttta cgcacctcta ttctctggca acagacaatg caatctattt acttcttatt
    49321 ggagggcttt atctggtcat agctttactt gttggcaagt tgatcaaaga cgagccaaat
    49381 gcaaaaggct ctggtatacc tcaggtggag gcagaactaa aaggaattat ggatttaaac
    49441 tggtggtcag tcctttggag aaaatttatc ggcggtgttt tatccattgc atctggtcta
    49501 atgctggggc gtgaaggtcc cagtattcaa ttaggagctg tcacggctaa aggtatatca
    49561 gttcttctta aatccagtga aatggaaaga aggagtttga ttgctagtgg cgctgcggca
    49621 ggtttagcag cagctttcaa tgcaccaata gcaggccttt tatttgttgt ggaggaagtc
    49681 tatcatcagt tttcacgtct ggtatgggtc tcagctctgg cagccagtat tactgcgaac
    49741 tttatttcct tacatttttt tggattaatg cctgttttgc atatgccgaa ggacttacag
    49801 ttactatctc ttgaccaata ttggatctat atcttacttg gagttttcct tggacttgct
    49861 ggatatttgt atgaagttgt tatcctcaat atacaaggtt tctataccct tctctcaaaa
    49921 atcattcctc tcccagttcc atactacagt gtatttgcct ttttgtttat tataccgatt
    49981 ggttattttt tccctaatct gttgggtggc gggcatcatt tgattttaga gcttccatat
    50041 ttggaacaag gactactgac attggcaatc ttgattttaa ttcgatttgt atggagcatg
    50101 atttcctatg gttctggtct accaggaggt atctttttac ccatattaac cttaggaagt
    50161 ctccttgggc tttttgtcgc acggttcttc cttgatattg gtttcatcag tcaggagcaa
    50221 atgctattgt ttattgtatt gggaatggca ggctttttcg cagcgatttc caaagcacct
    50281 ctaactgcta ttattttagt aactgaaatg gttggaagtt tgaaccaatt gatggtcatc
    50341 gggttggtag ctttgagttc ctatgtgatg atggacctct taggtggcgc gccagtctat
    50401 gaagcaatgt tggaaaaaat tctgccagaa gaagtagaac agcaagaaca catgacctta
    50461 atagaggttg ttgtcaacga aacattggac agaagatttg ttagcgagtt acgtttgccg
    50521 gattcatgct tgatcaccaa tcaaattcat catggtaagt caaggattgt gaaaggaaat
    50581 agccaacttt ccatgggtga ttccttgctc gttgcagttc caatctctca aattcatacc
    50641 gttcgtagga tatttgatgg agattagcat ttttttagat tgtcttaaca aagagatgag
    50701 aaaagtcccg atattataat gtttctgttg tctggttaac tctctcaatt caggaatgat
    50761 ttcatcggga atgaaactcc gaggaagcag accaatccgc attcatttgg caatccagta
    50821 agcgtctttc ttgtcagttt tctgacctgt aatggtcttc atgtgggctg gttgagcaag
    50881 tattagctcg aagtcatcac atagagcatg ccagacaggt cgccaataga cacctgtgtt
    50941 ttccatacta acagcttcca catgaaattg actgagaaat cgtggtaagc acgtagacct
    51001 ttagtcgtcg tatcaaatgt agctaagtaa cgctttggac aagttgaggg gaatacaaac
    51061 gacaatatcg acttgatcta cacatgatta tctatgacaa ttccttcctt cttgtaagtt
    51121 agatagccta tctactgaa
//
LOCUS       DASFQS010000007        44100 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.007, whole genome shotgun sequence.
ACCESSION   DASFQS010000007 DASFQS010000000
VERSION     DASFQS010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 44100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44100
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.007"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(87..2876)
                     /locus_tag="U1041_000351"
     CDS             complement(87..2876)
                     /locus_tag="U1041_000351"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEM4767491.1"
                     /translation="MKLKETLNLGKTAFPMRAGLPTREPEWQKAWDEANLYARRQELN
                     EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIE
                     QVLAKQGVKRKEMDLVEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTKDYE
                     AAQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKVKDGK
                     GLLDTNSYIVVWTTTPFTVTASRGLTMGADIDYVLVQPAGSDRKYVLAEALVDSLAAK
                     FGWESFEVISKHKGAEFEYIVTEHPWDREVDELVILGDHVTTDSGTGIVHTAPGFGED
                     DYNVGVKYDLEVAVTVNERGLMNEAAGPDFEGQFYDKVVPTIKEKLGDLLLASEVINH
                     SYPFDWRTKKPIIWRAVPQWFASVSKFRQEILDQIEATTFNPSWGKTRLYNMIRDRGD
                     WVISRQRAWGVPLPIFYAEDGTAIMTKEVTDHVAALFEEHGSIIWWKSEAKDLLPAGF
                     THPGSPNGEFTKETDIMDVWFDSGSSWNGVMNARENLAYPADLYLEGSDQYRGWFNSS
                     LITSVAVNGHAPYKAVLSQGFVLDGKGMKMSKSLGNTILPSDVEKQFGAEILRLWVTS
                     VDTSNDVRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPASDAVAYQELRSVDQYLL
                     VKFNKLVAQIRQAYDNYDFMAIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQ
                     MQTVFYDILVKITKLLTPILPHTAEEIWSYLEHEAEEFVQLAEMPEVETFANEAQLLA
                     DWENFMNFRTQAQKALEEARNEKVIGKSLEAHLTAYVSAETKSFLESLNADLAQLLIV
                     SNLTVTTEAAPESAVLVEEVAFTVERASGEVCDRCRRIDTSVAERSYGATICDHCASV
                     VEENFAEAVAQGFEA"
     gene            complement(2887..3327)
                     /locus_tag="U1041_000352"
     CDS             complement(2887..3327)
                     /locus_tag="U1041_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767492.1"
                     /translation="MIRLELVNKDNFDQVLDLEVAPKDQRRVASVEYSLAQAWLYREE
                     GHLLPYAVKSGQRIVGFVLLSIQEDKSYYVWRLLIDRHYQNRGYGKEVIRQVIGLAKE
                     DPSCHTITMNYVIGNHKMRYILEKLGFQSVGLEGQEMKMELSIK"
     gene            complement(3560..4249)
                     /locus_tag="U1041_000353"
     CDS             complement(3560..4249)
                     /locus_tag="U1041_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HEM4767493.1"
                     /translation="MALTALELKDKTFATKFRGYDADEVDDFLDIVTRDYEDLIRKNH
                     DQELELKNLRERLAYFDEMKESLSKSVLLAQDTAEKVKVAAEDQAANIIKQADYDAAT
                     LLHEAKDKANAILRNATDNAKKVVIETEELKNKTRIFHQRLKSTVESQLSLVNSSEWE
                     EILRPTASYIQTSDEAFRDVLHKALDEELPVEEESLDYTRQLTPEEIAELTRQAVAFE
                     SGDSVEISTEE"
     gene            complement(4258..5049)
                     /locus_tag="U1041_000354"
     CDS             complement(4258..5049)
                     /locus_tag="U1041_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEM4767494.1"
                     /translation="MKNDKNLLQHFSREEREFVEKIMDMCQQVEDTYSYRLTQFLHPR
                     QDEIVCKIANYYQLQTFSSRDFVSTEHSRVIIAPAYYELDIKDFELIALHLSYARKFH
                     TLSHSQVLGTFLNQLGIKREYLGDILIDDERLIVFIDQKFGQIALQSITKVARVPVKG
                     KEEEWTTVRLPIGQEWRSKDVLVSSMRLDKLISVAFNLSRATANKLIEAGHVKLDYVL
                     TEQTSKLVEIGQLISVRRYGRVRINEFLGFSKQGKIKLKLDIVKT"
     gene            complement(5052..5315)
                     /locus_tag="U1041_000355"
     CDS             complement(5052..5315)
                     /locus_tag="U1041_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEM4767495.1"
                     /translation="MQILIFLLLKIVEIYSYLLLAYALLSWFPSLYTSSIGRLIQWLV
                     APILKPFRRFNLQFMGLDWTVMAAMIALNMGTRFLVQLLLLLA"
     gene            complement(5320..5889)
                     /gene="sepF"
                     /locus_tag="U1041_000356"
     CDS             complement(5320..5889)
                     /gene="sepF"
                     /locus_tag="U1041_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HEM4767496.1"
                     /translation="MALKDTFKNLFNYFEVDEVNEVEEQADAYSMPNDRPKMRVASTT
                     AAPVREQQPKVETRREARSESQLQRLHERQQELMTNNNEKEIVKTTIDIKFPKRYEDA
                     PEMVNLLLDNASILIDFQYMSEQQARRCLDYLDGARSVLSGNLKKVSNTMWLLTPVNV
                     TVNIEELRNANAGTTTGAADSNFDFDIKR"
     gene            complement(5906..6577)
                     /locus_tag="U1041_000357"
     CDS             complement(5906..6577)
                     /locus_tag="U1041_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEM4767497.1"
                     /translation="MNFQKNKDAIFSAVAKAAEKAGRPSESVKVIAVTKYVDSSIANQ
                     LVNTGITHIGENRVDQFLEKYNALADKQLTWHLIGTLQRRKVKDIIPFVDYFHALDSV
                     KLAQEIDKRATKIVKCFLQVNVSGEESKHGFAVSEIDAALAEISLLENIELVGLMTMA
                     PIDATDDELDEIFSKMQEIQEELATRNLPRMPFTELSMGMSGDFERAIAHGATYVRIG
                     SAFFE"
     gene            complement(6584..7813)
                     /gene="ftsZ"
                     /locus_tag="U1041_000358"
     CDS             complement(6584..7813)
                     /gene="ftsZ"
                     /locus_tag="U1041_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEM4767498.1"
                     /translation="MAFSFEAAASHGAVIKVIGVGGGGGNAINRMIEEGVAGVEFIAA
                     NTDVQALSSSKAETVIQLGPKLTRGLGAGGQPEVGRKAAEESEEALTNVLTGADMVFI
                     TAGMGGGSGTGAAPVIARIAKNLGALTVAVVTRPFGFEGNKRGNFAIEGIEGLREQVD
                     TLLIISNNNLLEIVDKKTPLLEALSEADNVLRQGVQGITDLITNPGLINLDFADVKTV
                     MENKGNALMGIGIGTGEDRVIEAARKAIYSPLLETTIDGAEDVIVNVTGGYDMTLTEA
                     EDASEIVNQAAGQGVNIWLGTSIDETMKDEIRVTVVATGVRQDTADKPARHRTEAVSP
                     RPSQRFDHSVASAPTRGAAQQTEAPKASAFGEWDLRRENLIRPTDTEPTSTVSVEKFK
                     MDQDEDELDTPPFFRNR"
     gene            complement(7839..9218)
                     /gene="ftsA"
                     /locus_tag="U1041_000359"
     CDS             complement(7839..9218)
                     /gene="ftsA"
                     /locus_tag="U1041_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEM4767499.1"
                     /translation="MARNGFFTGLDIGTSSVKVLVAEYIDNEMNVIGVSNVKSAGVKD
                     GIIVNIEVAAGAIKKAIEQAEEKSGIRIEKVNVGLPANLLQIEPTQGMIPVTTDSQEI
                     TDLDVENVVKSALTKSMTPEREVISFIPEEFTVDGFQGIKDPRGMMGIRLEMRGMLYT
                     GPRTILHNLRKTVERAGVQVENIVISPLALTRSVLNEGEREFGATVIDLGGGQTTVAV
                     MRGQELQYTNIYQEGGDYITNDISKVLTTSKSIAENLKYNYGIAYPQDASDKEKFTVD
                     VIGENAPVEVTERYLSEVIAARLRQIFDRVKQDLERTRALDLPGGIVIVGGGAILPGI
                     TELAQEVFGVNTKLYVPNQIGIRNPAFASVISFVEYVGELEDVENIAQHAVNGETTLR
                     HKPVEIPVARPRISQPIQREIVNELNTVDQVEEQVAPTYHDEEEEVRPAAKGNITDRI
                     RGLFGSMFE"
     gene            complement(9371..10453)
                     /locus_tag="U1041_000360"
     CDS             complement(9371..10453)
                     /locus_tag="U1041_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEM4767500.1"
                     /translation="MTEKDSNVEESVLEAEQASQVELDSEQISPAEKESVLAEEKGLS
                     TDVDIPEMTASDDEKSAFFEQWKARHQAYLAHKDDADIQSVDEGQTEQKIPEAKKSKR
                     GLFQGINRRQESLESKTETEKKVQPLKVDIPSKVVWKAIPVLVTSLLLAALALYFISP
                     TSKKKQIEVVGNERLTAEQVENYSLISPDDYNVTIALHADAYAKNIKKNSSSVETATI
                     KFQFPAAFTIQIKEYAIIGYIQQQSQWYPVLSSGEVGGEPISQDSLPEGYTTINLSDK
                     ELIKELAIELGKIDAGIRSAIQTINLTPSKVTADLLTLNMADGNTVLVPLSEISQKLP
                     YYTKIAAEVTVPTTIDMEVGIYRYAS"
     gene            complement(10459..11523)
                     /locus_tag="U1041_000361"
     CDS             complement(10459..11523)
                     /locus_tag="U1041_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HEM4767501.1"
                     /translation="MKKIVFTGGGTVGHVTLNLLLIPRFLEEGWEVHYIGDGNGIEHE
                     QIVKSGLDVRFHSIATGKLRRYFSLQNMLDVFKVGFGILQSLAIIAKIRPQALFSKGG
                     FVSVPPVIAANLLRVPVFIHESDLSMGLANKIAYKFATTMYSTFEQPASLTKVKHVGA
                     VTKVGQVNDKVTPIQLPEILSHFDKNLPTLLFVGGSGGAKVFNDLISQNSLALTERFN
                     IINLTGDASLNRLEKNLYRVDYVTELYQPLMNIADVVITRGGSNTLFELIAMQQLHLI
                     VPLGRQASRGDQIENAQYFEKKGYSKQIDESQLTFASLLVEVDELLKNKEFYIQNMAN
                     SNEIQSVDSFYNLLREDMGR"
     gene            complement(11526..12875)
                     /locus_tag="U1041_000362"
     CDS             complement(11526..12875)
                     /locus_tag="U1041_000362"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEM4767502.1"
                     /translation="MKVIDQFKNKKVLVLGLAKSGESAARLLDKLGAIVTVNDGKPFE
                     ENPTAQSLLEDGIRVICGSHPVELLDEDFALMVKNPGIRYDNPMVEKAIEKGIPVWTE
                     VELAYLISEAPIVGITGSNGKTTTTTMIAEVLNAGQKSAKLCGNIGYPASSVAQTATV
                     EDTLVMELSSFQLMGTDSLRPHIAVVTNLIASHIDYHGTVEDYVAAKWMIQRQMTAED
                     FVVLNFNQNEARELAGQTKATVVPFSTLEVVDGAYLADGKLYFKGEYIMDADQIGVPG
                     SHNIENALATIVVAKLMGVENQAIKESLSAFGGVKHRLQYVGEIDGVAFYNDSKSTNI
                     LATQKALSGFDNSKVILIAGGLDRGNEFDELVPDLIGLKNMVILGQSAPRVQRAADKA
                     EVETVSVLDIADATRKAFEMAEKGDIVLLSPANASWDMYANFEVRGDVFLQTFEELN"
     gene            complement(13022..13324)
                     /locus_tag="U1041_000363"
     CDS             complement(13022..13324)
                     /locus_tag="U1041_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3165 family protein"
                     /protein_id="HEM4767503.1"
                     /translation="MFYLILAILVVLFYIFVAPNHIKGTMNLIAAVFLLVGMGIALFL
                     GILKIMQISTDFWLGLVMVLIGLWAMRDIHYLENGSKGRKNSLRPRHLNKLTETDA"
     gene            complement(13342..15189)
                     /gene="typA"
                     /locus_tag="U1041_000364"
     CDS             complement(13342..15189)
                     /gene="typA"
                     /locus_tag="U1041_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEM4767504.1"
                     /translation="MTKLREDIRNVAIIAHVDHGKTTLVDELLKQSQTLDERTQLDER
                     AMDSNDIEKERGITILAKNTAVAYNGTRINIMDTPGHADFGGEVERIMKMVDGVVLVV
                     DAYEGTMPQTRFVLKKALEQNLTPIVVVNKIDKPSARPEEVVDEVLELFIELGADDDQ
                     LEFPVVYASAINGTSSLSDNPADQEETMAPIFDTIIEHIPAPVDNSDEPLQFQVSLLD
                     YNDFVGRIGIGRVFRGTVKVGDQVTLSKLDGTTKNFRVTKLFGFFGLERKEIQEAKAG
                     DLIAVSGMEDIFVGETVTPTDAVEPLPVLRIDEPTLQMTFLVNNSPFAGREGKWVTSR
                     KIEERLLAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEV
                     IIKEIDGVKMEPFERVQIDTPEEYQGSVIQSLSERKGDMLDMVSTGNGQTRLVFLVPA
                     RGLIGYSTEFLSMTRGYGIMNHTFDQYLPVVQGEIGGRHRGALVSIDQGKATTYSIMR
                     IEERGTIFVNPGTEVYEGMIIGENSRENDLTVNITTAKQMTNVRSATKDQTSVIKTPR
                     ILTLEESLEFLNDDEYMEVTPESIRLRKQILNKAERDKAAKKKKLATEE"
     gene            complement(15324..16316)
                     /locus_tag="U1041_000365"
     CDS             complement(15324..16316)
                     /locus_tag="U1041_000365"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016502595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HEM4767505.1"
                     /translation="MKKSFIHQQEEISFVKNTFTQYLKDKLEIVEVQGPILSRVGDGM
                     QDNLSGVENAVTVNVKLIPDATYEVVHSLAKWKRHTLARFGFNEGEGLFVHMKALRPD
                     EDSLDPIHSVYVDQWDWEKVIPDGRRNLAYLKETVEQIYKAIRLTELAVEARYDIESV
                     LPKKITFIHTEDLVKNFPDLTPKERENVVAKEYGAVFLIGIGGELADGKPHDGRAPDY
                     DDWTSPSEAGYKGLNGDILVWNEALGSAFELSSMGIRVDEEALKRQVAITGDEDRLEF
                     DWHRALLNGLFPLSIGGGIGQSRLAMFLLRKKHIGEVQSSVWPQEVRDSFENIL"
     gene            complement(16401..17459)
                     /locus_tag="U1041_000366"
                     /pseudo
     CDS             complement(16401..17459)
                     /locus_tag="U1041_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774994.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
     gene            complement(17502..18266)
                     /locus_tag="U1041_000367"
     CDS             complement(17502..18266)
                     /locus_tag="U1041_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010976440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3883 domain-containing protein"
                     /protein_id="HEM4767506.1"
                     /translation="MSNRNRHKYYELLNLLGYGLAKFDNEFIKEFGFKTKTDFYQYFV
                     DLGIAETRSVVKNRMDIFDPFFPNPRSGWWQRMEDYRPRKELIDSLFGNEDVVNYANI
                     VKLYLQKVHNVKEITLIESPIVKSKFKRLQETGLEAELYFMNNYQKESVFQSGTIEDA
                     RLYGDGYDFQLSVGKNNYLAEVKGIRGKHGDIRLTLKEYQQAEFYKSNYFLSVVSNLE
                     SSSKLTIISNPLKQLEFRKVIRKTKDIVEYHLVDKL"
     gene            complement(18271..19212)
                     /locus_tag="U1041_000368"
     CDS             complement(18271..19212)
                     /locus_tag="U1041_000368"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEM4767507.1"
                     /translation="MSIDLNILWFEDTTTWYNNIYRKLERYVKDRNFLLKVTRFDTVN
                     TEQLVKLLHEKHFDVIFIDLNLLGSIKGTSAIEVIRRQNILSDILFYSVQKNDIEDQL
                     SKKFIEGTYVCSRENYEFIPKAKKIIDKNILKTENVLSIRGLLMNNVSVFDQKMKLII
                     SKYLDLATEDEKNSLDRYVEKQGRDFYNKISKVHQNSTSASEGYLKAVLEQERAYVMD
                     SDKLARVVNKIFKMLKSSNDDKYDERYDNFVDNYRSNILKERNLLAHAKTDGVHGFKI
                     ENQDGRIITYDSVKCNEIRGNINRYNNLFEETLHKWG"
     gene            complement(19202..21400)
                     /locus_tag="U1041_000369"
     CDS             complement(19202..21400)
                     /locus_tag="U1041_000369"
                     /inference="COORDINATES: protein
                     motif:HMM:NF014567.1,HMM:NF024977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEM4767508.1"
                     /translation="MIEKDKIQFNFSYYALNLLGKQMYTNRWSAISELIANGLDAGAT
                     KVNLYIESIDKKNSILEIIDNGSGMDYDDLSTKYALIGRNKRLSSEDLSEKTKGRKGI
                     GKLATLFLSKKYYIVSKKDGIASAWMLDSTDALDSDIPELVRVPIDDVHIENTKIWDE
                     IESGTLIKSVGVNLAGFAEGKLESLKMTLANYYLLDNLGADIEVAYRTDVNQAIEFSK
                     VSKVIGFKNFYAFFQTDKTVVNMDLLNDSVKISADLEEVSNKLRQVKRIYPSEISRIS
                     LTGKEEFLNIDGELEEITYELTGWIGIHSTINMSEALENTGTDTKDRFIRNQVYKANQ
                     LRLYVRDKLAVSDFMPLLNNTQAFGAYIEGEISFDVLDHDRLEDISTTNREGLSGNDE
                     RITLLIDLLKPIVNKLISERANIGSVVRKEVDEIRRKEKKALEEKRIQEEEAKKIAEE
                     ERREAELARKTAEREKIEAQQKQRQAEVAKEVEREKRLVTEQELKITSKQALFLRKLT
                     NPKFENATEALHAMYTESDSIELSINSISQILNEYQATDIIAEVDEDIYGITISAQKI
                     KKIYDLAFSADFRLSDQTQSFILQEFIEQYIKDLLKPTKDRYSKIKFKYQPEKILTNK
                     IKFNTAELGLVVDNLVNNSFKAGASNIDLDFYTNGIYTVMEFKDDGEGLSSAIITPDR
                     IFELGYTTTESTGVGLSHVKRVMEENGGYIKLHEKNERGFCLELGFLNEY"
     gene            complement(21411..22574)
                     /locus_tag="U1041_000370"
     CDS             complement(21411..22574)
                     /locus_tag="U1041_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000573847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEM4767509.1"
                     /translation="MINVVDLFSGAGGLTFGFQKRIVDNSFVRRDDFKINFANEFDKN
                     AAEAFRQNYPDIPMIEGDIADLNIDYLTNIGVNIKDIDLVIGGPPCQSFSTVGKRQFD
                     NRAKMYKEYRRLLSFLQPKMFVFENVLGLLTMKNDDKKPVLEDVKESFQDFSDFNDAN
                     GYNLHIQVLNAKDFGVPQNRERVFIIGVRNDLQLDVEWRFPNSIANEHPITLREAISD
                     LPLLGNNETMNSYQGEPVTVYQQLMRGNTIELKNHASRRHGDRMIKIMEALKEGQGKD
                     DINSMVEEGKLPKELFLTSGYSNTYGRLWWDRPSTTITNNLSTPSSLRCIHPSQNRAL
                     TAREGARIQSFPDDYVFIGGFEAVNTQIGNAVPPILSIYLANRIADFFRENNL"
     gene            complement(22776..25475)
                     /locus_tag="U1041_000371"
     CDS             complement(22776..25475)
                     /locus_tag="U1041_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM4767510.1"
                     /translation="MSYYYEKSTGKVAKHLARFPYYATDKILNLMQFQDNNQQFLVSD
                     KHLYDYFEEQKHQLSTDEKLSILFSLFKGRVDVYAKSYIDENGKINYFPSYNYGWKKL
                     PVEKRTCQPLTKQVLLAHLRGEMSIGIFPMSLSDTCSFLVIDFDKKNWREEVSILRDT
                     AEKYGFEGHIEISRSGNGAHLWFFFEEEIACQQARNVGKRLLELAMQESKDIRFSSFD
                     RMFPNQDILPKGGFGNLIALPLQGEAFKKGRTVFVDRHFQPYLEQWSYLQQIKKIEQK
                     KILDFLGQEFSDSVDDTVLDCSLSNVIRVEKRTISSKTNYLLRKLASFSNPEFYLKQA
                     TRQPTYQTPERIYLFEETDEALHLPRGILASLQEIFETVTIRDNRNSLSPIQISFKGR
                     LRFEQELALADLLASENGLLCAETGFGKTVLGAALIAQRKCRTIILVHNRQLLEQWLE
                     RLGEFLEIEEKEAVRYTPSGRVKVIGHIGQYRASKKWRSKLVDVVMIQSLFQLDTISD
                     FLSDYDMMIVDECHHVTALQFERVVAQFAGQYLYGLTATPERKNGHQPIVFQRIGPIL
                     HTAQSGQYDFKKRLLLRLTSFGKLDLEQSNSTNFAALNDWLAKDLHRNTLIVQDIFKL
                     YQEKRNILVLVNRREHIELLEKLLIEKEMTNIFCLSGASKRRDTKELLKRISELDENS
                     PFVLISTGKFIGEGFDMPKLDTLILAAPLSWKNNLIQYAGRLHRPYQGKTEVRIVDYL
                     DILVPYLERMYQKRQIAYRKMAYQVGEKEQTQVLYSGRDYEEKFREDLRNTCSTAYLQ
                     LHTLTSSKFQELLGQLQGKQVVIHVSKNHKLSEWLMGLNSDNVKVKLVPERIGTTAVI
                     LDSNLVWYGNLSPFTYHSDDQASLLRLESQAIAEELLEKFNEE"
     gene            complement(25571..26377)
                     /locus_tag="U1041_000372"
     CDS             complement(25571..26377)
                     /locus_tag="U1041_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4767511.1"
                     /translation="MQPTYNIDNPNLSYEAKQELWETGFGLQKVDGLTPSVYMEELAD
                     RQARGEYTYEQVYEEITKYHQSTDASTQEADIVSLRIVEMLSQNGFSLRPTTLLHIHK
                     ELFQDIFDSSVPIGEYRTVNITKNEPVLKGDTVIYSDFPLIVATLDYDFQQERDFSYA
                     GLDKKAIVAHIQSFISGIWQIHPFREGNTRTITVFLIKYLRSLGFDIDNEPFQKHAKY
                     FRDALVLDNAKLVNKRSAFLTAFFENLLLNGQNDLSSERMYEELGIDEYQ"
     gene            complement(26553..29201)
                     /locus_tag="U1041_000373"
     CDS             complement(26553..29201)
                     /locus_tag="U1041_000373"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014623308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEM4767512.1"
                     /translation="MSKELSPKYNPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIP
                     PPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQG
                     VTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSLDYQRDRFTLDEGLSKAVRKVF
                     VELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVAT
                     TRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKPIPIVADEHADPEFGTGVVKIT
                     PAHDPNDFLVGQRHNLPQVNVMNDDGTMNELAGEFAGMDRFEARKTTVAKLQELGALV
                     EIENRVHSVGHSERTGVVVEPRLSTQWFVKMDQLAKNAIANQDTADKVEFYPPRFNDT
                     FLQWMENVHDWVISRQLWWGHQIPAWYNESGEMYVGEEAPAGDGWVQDEDVLDTWFSS
                     ALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVL
                     IHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDA
                     SWNFINKIWNISRYILMNNEGLTLDAARENVAKVAAGEAGNVTDRWILHNLNETIAKV
                     TENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVMTRSVLLYTLDQI
                     LRLLHPIMPFVTEEIFAQYAEGSIVVAAYPVVNPAFENAEAHKGVESLKDLIRSVRNS
                     RAEVNVAPSKPITILIKTADAELETFFKANENYIRRFTNPEQLEISSSIAAPELAMSA
                     VITGAEIFLPLADLLSVEEELARLDKELAKWQKELDMVGKKLSNERFIANAKPEVVEK
                     EKEKQADYQAKYDATVGRIEEMKKLV"
     gene            complement(29261..29458)
                     /locus_tag="U1041_000374"
     CDS             complement(29261..29458)
                     /locus_tag="U1041_000374"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767513.1"
                     /translation="MTVTNIYFCEKCKRELGDDKKLCFDCQNKKDDKEKTIFKWIFGG
                     FSSLVGVALIKHFFGSDKDNL"
     gene            complement(29445..30476)
                     /locus_tag="U1041_000375"
     CDS             complement(29445..30476)
                     /locus_tag="U1041_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002269107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767514.1"
                     /translation="MFTRQNEIISSESSPPSPIRRRAFNVELYNQQKENILVKKIKAQ
                     LNNAPLFLEELQKNSRYELDMTQFSEMLATGAIRFMRKNKTGESLATLVDSSTGKMFA
                     QVPIKSVPVELGSSIATAGLSQKLEDLSAKLDLLESKINQVNRNFDLNRYAEVLSAKE
                     KYETALLIQDEDTRKQLLREAYSQATNAKNLLLQQIYDSRYKIEKQYEEYRNRNQLQK
                     WTSKSYTKDANELAETCLMNLQYLKDAFSFQIGCLTELQEYEALFYCLLDFENIILDD
                     FSGRDALLLDEFIPNSKNPFKYFSSEVLESTKSLTEFIANNDDFLEVHFIPEQLIISQ
                     NKEELDDCD"
     gene            complement(30584..30967)
                     /locus_tag="U1041_000376"
     CDS             complement(30584..30967)
                     /locus_tag="U1041_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4767515.1"
                     /translation="MLHHVEIYVSDLETSRAFYDFLLTKLGYSLYQEWEEGLSYKKAE
                     QYLVFVQTPQDFLEASYHRCRIGLNHLAFHAGTPDDVDQWRKEFLTRRVKLLYDDRYP
                     HAGGPDHYALYLEDPDGIKIELVGE"
     gene            complement(31208..31594)
                     /locus_tag="U1041_000377"
     CDS             complement(31208..31594)
                     /locus_tag="U1041_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEM4767516.1"
                     /translation="MGKKKVNRKKQLKKQLADLKRAGRVGLERAAEVVETVAHKAEAV
                     VEHAVEQVKEVATEVTSSATSLEDFLALPELEGIAAARLETFYEAGIKSVSDFANHTE
                     KELLALKGIGPATIKQLKEKGIELKA"
     gene            complement(31617..31874)
                     /locus_tag="U1041_000378"
     CDS             complement(31617..31874)
                     /locus_tag="U1041_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011074664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1912 family protein"
                     /protein_id="HEM4767517.1"
                     /translation="MMTKEQEFLKEFEAWVNTQVMVNEMAVEESRRVLEEDKDERAAD
                     AYIRYESKLDAYRFIQGKFANYHAGKGFHDLPDELFGQRHY"
     gene            complement(31981..32982)
                     /locus_tag="U1041_000379"
     CDS             complement(31981..32982)
                     /locus_tag="U1041_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEM4767518.1"
                     /translation="MIEVKTFGKKAKLYCLENKNGMQVTLTDFGARVVGVFLPVEEGG
                     NLRNVSLGAGAAEEYLQTDPYPGATIIPVAGRISDAQVEIGGHVYPLTENEPGRTLHG
                     GIGTANEQYWDAELDHERNQVTFGITLKDGFNGFPGDVMVKAIYRLTDANELMVEYRA
                     VSDKDTIFNPTNHIYFNLTGDFQRSVAEHRIKIAANHYAPLGEDNLPTGVLEDVTGTP
                     FDFRDFAPFAQGFDGQYPQNVLVKGYDHPWLLEEVDIPVEVLSPDGKIGLSVKTNQPA
                     VVIYTYNFPVEALACYHGVFSLECQALPNACNVDGFGSILLEQGEEFLSKTTYRFTW"
     gene            complement(33211..33606)
                     /locus_tag="U1041_000380"
     CDS             complement(33211..33606)
                     /locus_tag="U1041_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4767519.1"
                     /translation="MTRSLVLVSHGIFCEELKKSTEMIMGPQEDIYTVALLPEEGPED
                     FQKKFEETIANLDDFVVFADLLGGTPANVVSRKLIEGGRFDLYAGMNMPMVIGFLNGV
                     LLGEAVDYVEFGTSNLVYVNSLLTSDEDE"
     gene            complement(33606..34424)
                     /locus_tag="U1041_000381"
     CDS             complement(33606..34424)
                     /locus_tag="U1041_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEM4767520.1"
                     /translation="MTKSNYKLTKEDFNQINKRSLFTFQLGWNYERMQASGYLYMILP
                     QLRKMYGDGTPELKEMMKLHTQFFNTSPFFHTIITGIDLALEESDGVASKDAVNGIKT
                     GLMGPFAPIGDSIFGSLVPAIMGTVAATMGKEGSPVGIFLWVAVAVAYDIFRWKQLEV
                     AYKEGTKLITTMRDKLTALVDAASVMGVFMMGALIATMINFEVTWAPHVGEKVIDIQD
                     LLNTIFPRLVPAVFTGFVFWLLGRRGMTSTKAILIIIALAVGLSAIGHFVFGMA"
     gene            complement(34411..35307)
                     /locus_tag="U1041_000382"
     CDS             complement(34411..35307)
                     /locus_tag="U1041_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS
                     mannose/fructose/sorbose/N-acetylgalactosamine transporter
                     subunit IIC"
                     /protein_id="HEM4767521.1"
                     /translation="MMQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFISGLIMGD
                     MATGLAIGASLQLMVLGVGTFGGASRIDATSGAVLATAFSVSQGIDPELAVSTIAVPV
                     AALLVYTDIAGRFSTTFFAHRVDAAIERFDYAGIERNYLLGAIPWALSRALPVFLALA
                     FGGGFVDAMVKTIEQYQWIANGLTLAARMLPGLGFAILLHYLPLKRNLHYLAVGFALT
                     AMLTVLYGNVSALGGAVAGIVGTLPEDAGVAFVNNFKGLSMIGIAIVGAFLSVLHFKN
                     SQKVTVVAPSNSESGEIEDDEI"
     gene            complement(35346..35831)
                     /locus_tag="U1041_000383"
     CDS             complement(35346..35831)
                     /locus_tag="U1041_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HEM4767522.1"
                     /translation="MAIIATRIDGRLIHGQVANLWTTKLNISRIMVIDDAVAQNDIEK
                     QGLKLACPPGVKLSILPIEKAANNIKEGKYDAQRLLIVARRPENFLRLVEYGVELAEL
                     NVGNMSQSPETRSVTRSINVVDKDIADFDALAAKGVKLFAQMVPGDSPKDFMPLLDKV
                     R"
     gene            complement(35887..37659)
                     /locus_tag="U1041_000384"
     CDS             complement(35887..37659)
                     /locus_tag="U1041_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HEM4767523.1"
                     /translation="MKEFYIGDQFYLDGEPFKILSGAIHYFRVHPDDWYHSLYNLKAL
                     GFNTVETYVPWNMHEPRKGEFCYEGILDIERFLKLAQELGLYAIVRPSPYICAEWEWG
                     GLPAWLMKEELRVRSSDSVYLQHLDEYYASLIPKLAKLQLAQGGNVLMFQVENEYGSY
                     GEEKEYLKSVAGLMRKHGLTAPLFTSDGSWRATLRAGTLIEDDVFVTGNFGSKARENF
                     ANMTAFFNEHQKNWPLMCMEFWDGWFNRWGDEIIRREPEEMVDSVMECIELGSLNLYM
                     FHGGTNFGFMNGCSARGQIDLPQVTSYDYDAILDEAGNPTKKFYILQQRLKEVYPELE
                     YAEPLVKEAKAFSDVLLHDKVSLFATLENVSDCVKGFYPKNMEELDQSTGYILYRTEL
                     ERDKTEAERFRVVDARDRIQIYADGKFVATQYQTEIGDDVELDFKDDKLTLDILVENM
                     GRVNYGHKLTAPTQSKGLGRGAMADLHFIGHWETYPLHLESVEDLDFSKGWEEGQAAF
                     YRYQFELDELADTYLDMTGFGKGVVFVNNVNIGRFWEKGPILYLYIPKGYLKKGENEI
                     VVFETEGKYREKISFSQEPVYKEV"
     gene            37881..38591
                     /locus_tag="U1041_000385"
     CDS             37881..38591
                     /locus_tag="U1041_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4767524.1"
                     /translation="MKVPKYQLVQNDLRQQIISGKFENGDKFYTESELTKLFNVSSIT
                     VIRAVNELVKDGYLVRQQGKGTFVSRSRKGRLVEFSDIEIFPMDKDKVTVLSCEKGNK
                     PDILEKLNLDKNEFYYKIVRVRAAEDTPYIFHNSYIPQRYIQNPDAPLEHYQSIYQRF
                     KLDYNIHMSEEPFVETNEIVSPCPKEVATHLKLKATEPAVLQNKTTTNSTSGEVMEYT
                     ETYKHWKYYKFEITANHR"
     gene            complement(38733..39464)
                     /locus_tag="U1041_000386"
     CDS             complement(38733..39464)
                     /locus_tag="U1041_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4767525.1"
                     /translation="MVSQTVEKPLYLQLVDELEVAIRERMAPNDKLFSERELTQVYGV
                     SRITVRLALQELEKRGLVYKKHGKGTYVSEISDTAVDLSQAYSFTEQMKKIGKVPRTS
                     ILSFKLVKASDYIVQHLQLSQGEEVFEVERLRLADEVPMMLERTYVPASLFPALTAIR
                     MREKPLYEIFLEDYGQTIRLAEEEFYASIALDNEAKILGIPSNSPVLHLVRKTYNDKN
                     RIIEFTFSIARADQFRYKISHQRGY"
     gene            complement(39564..39881)
                     /locus_tag="U1041_000387"
     CDS             complement(39564..39881)
                     /locus_tag="U1041_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF960 domain-containing protein"
                     /protein_id="HEM4767526.1"
                     /translation="MAFEQTNGRYASFGVVTSLPGEVIDSFWYVIDHYLKGVIPLKNV
                     IRFSIKNRRGKITLVFSQEGYKNVLAVDLSSRFDPFYPSTILVMDKQGKETITLPDEV
                     TLL"
     gene            complement(39939..40472)
                     /locus_tag="U1041_000388"
     CDS             complement(39939..40472)
                     /locus_tag="U1041_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000775318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HEM4767527.1"
                     /translation="MKLPKEGDFITIQSYKHDGEIHRTWRDTMVLKTTENAIIGVNNH
                     TLVTENDGRRWVTREPAIVYFHKKYWFNIIAMIRENGVSYYCNLASPYVLDNEALKYI
                     DYDLDVKVFADGEKRLLDVDEYKRHRKAMKYSDDIDFILKENVKILVDWINNQRGPFS
                     PAYVNIWYKRYLELRSR"
     gene            complement(40548..41324)
                     /gene="recX"
                     /locus_tag="U1041_000389"
     CDS             complement(40548..41324)
                     /gene="recX"
                     /locus_tag="U1041_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEM4767528.1"
                     /translation="MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQ
                     EFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYLKKYEIEENNIVKIVTVLEEEKW
                     LDDENYVDSYVRQNALNGDKGPAMLRQKLMQKGISKLLIDKRLAEEDFSELARKIGEK
                     LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDALIAKELDK
                     QYRKYSRKYEGYELKQRLIQALARKGYDFDRIQAVLRDYL"
     gene            41362..42714
                     /gene="rlmD"
                     /locus_tag="U1041_000390"
     CDS             41362..42714
                     /gene="rlmD"
                     /locus_tag="U1041_000390"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM4767529.1"
                     /translation="MNLQVNQRIPLKIKRMGINGEGIGFYQKTLVFVPGALKGEEIFC
                     QITSVKRNFVEAKLLKINKESKFRVKPACDIYQACGGCQIMHLRYDKQLDFKQDLLQQ
                     ALKKFKPAGYENYTIYPTIGMDKPSHYRAKLQFQTRSFKDQVKAGLYAENSHRLIGIT
                     NCYVQDAETQEIINGIAKLLTKHRIPIYNERKQHGIRTVMVRKARKTGQVQVIFVTSC
                     QVNLIKLIDELTSQFPSIITIALNWNRQKTSDIYGEKTEILWGEQAIDEAVLDYEFSL
                     SPRAFYQLNPQQTEILYGEAVKALDISGDEDLIDAYCGVGTIGFAFAKKVKSVRGMDI
                     IPEAIEDAKANAKRMGLSNTHYEAGKAEEIIPKWYQEGYRADALVVDPPRTGLDEKLL
                     KTILDYKPAKMVYVSCNVSTLARDLVELSKAYKVEYIQSVDMFPHTARTEAVVKLSKK
                     "
     gene            43001..43078
                     /locus_tag="U1041_000391"
                     /pseudo
     CDS             43001..43078
                     /locus_tag="U1041_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677188.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(43268..43341)
                     /locus_tag="U1041_000392"
     tRNA            complement(43268..43341)
                     /locus_tag="U1041_000392"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43305..43307),aa:Pro,seq:tgg)
     gene            complement(43389..43462)
                     /locus_tag="U1041_000393"
     tRNA            complement(43389..43462)
                     /locus_tag="U1041_000393"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43426..43428),aa:Arg,seq:acg)
     gene            complement(43481..43564)
                     /locus_tag="U1041_000394"
     tRNA            complement(43481..43564)
                     /locus_tag="U1041_000394"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43528..43530),aa:Leu,seq:taa)
     gene            complement(43572..43643)
                     /locus_tag="U1041_000395"
     tRNA            complement(43572..43643)
                     /locus_tag="U1041_000395"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43609..43611),aa:Gly,seq:gcc)
     gene            complement(43656..43728)
                     /locus_tag="U1041_000396"
     tRNA            complement(43656..43728)
                     /locus_tag="U1041_000396"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43693..43695),aa:Thr,seq:tgt)
     gene            complement(43747..43828)
                     /locus_tag="U1041_000397"
     tRNA            complement(43747..43828)
                     /locus_tag="U1041_000397"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43792..43794),aa:Leu,seq:tag)
     gene            complement(43832..43904)
                     /locus_tag="U1041_000398"
     tRNA            complement(43832..43904)
                     /locus_tag="U1041_000398"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(43869..43871),aa:Lys,seq:ttt)
     gene            complement(43970..44042)
                     /locus_tag="U1041_000399"
     tRNA            complement(43970..44042)
                     /locus_tag="U1041_000399"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(44007..44009),aa:Asp,seq:gtc)
BASE COUNT        12864 a        10169 c         7635 g        13432 t
ORIGIN      
        1 cttgacaacg gataattttg attttcgaag agtattataa aaaaagccta tcgctagata
       61 gactttaaca aatgtattgt gattgcttag gcttcaaaac cttgagctac tgcttcagca
      121 aagttttctt ccactacgct tgcacagtgg tcacagattg tcgcaccata gctgcgctct
      181 gcaacactag tatcaatgcg acggcaacgg tcacacactt caccgcttgc acgctctaca
      241 gtaaaggcaa cttcttctac caaaacagca ctttcaggag ctgcttccgt ggttactgtc
      301 aagtttgaaa cgatgagcaa ctgagcaagg tctgcattca agctctccaa gaaggactta
      361 gtttcagctg agacataggc agtcaaatga gcttcaagtg acttgccaat cactttttca
      421 ttacgcgctt cttccaaggc tttttgtgcc tgagtacgga agttcataaa gttttcccag
      481 tcagccaaaa gctgcgcttc attggcaaag gtttccacct ctggcatttc cgccaattgt
      541 acaaactctt ctgcttcgtg ttccaagtat gaccagattt cttctgctgt atgtggcaag
      601 attggagtca agagcttggt aattttcacc aagatgtcat agaagacagt ctgcatctga
      661 cgacgagaaa gtgatttagc accatcgata tagacaacgt ccttggcaaa atccaagtaa
      721 aaagctgaca agtcaagtgt tacaaagttt acgacagact tgtagatagc catgaagtca
      781 tagttgtcgt aggcttgacg gatttgagct accaatttat tgaatttcac caagagatac
      841 tggtcaacag aacgaagttc ttggtatgcc accgcatcac ttgcaggatt gaaatcagaa
      901 gtgttagcaa tcaagaagcg aagggtatta cggattttac ggtaggtttc agaaacctgt
      961 ccaagaatat ccatagacac acgtacgtcg tttgaagtat ccacagaagt tacccacaga
     1021 cgcaagattt ctgcaccaaa ttgtttctca acatcacttg gtagaatggt atttcctaga
     1081 gatttagaca tcttcatacc tttgccatct aagacaaaac cttgtgacaa gacagcctta
     1141 tatggcgcat gaccatttac ggctacagag gtaatcaagg atgagttaaa ccaaccacgg
     1201 tattggtctg aaccttcaag gtagaggtct gctgggtagg caaggttttc acgggcgttc
     1261 atgacaccat tccaagacga accagagtca aaccatacgt ccatgatgtc tgtttctttg
     1321 gtaaattcgc catttggtga acctggatga gtgaaaccag ctggcaagag atctttggct
     1381 tcagatttcc accagatgat tgaaccatgt tcttcaaaga gggcagcaac gtggtctgtc
     1441 acttccttgg tcataatggc tgttccgtct tcagcataga agattggaag cggcacaccc
     1501 caagcacgtt gacgagagat aacccagtca ccacggtcac ggatcatgtt gtaaagacgt
     1561 gttttacccc aagatggatt gaaagtcgtt gcttcgattt gatccaagat ttcctgacgg
     1621 aatttagaga cagaggcaaa ccattgcggt actgcacgcc agatgattgg cttcttggtt
     1681 ctccagtcaa atgggtatga gtgattgatc acttcactag caaggagcaa gtcgcctaat
     1741 ttttccttaa tcgttggtac aaccttgtca tagaattgcc cttcaaaatc aggacccgca
     1801 gcttcattca tcaagccacg ttcgttgaca gttaccgcaa cctccaagtc atatttgaca
     1861 ccgacattgt agtcatcctc accaaagcct ggagccgtat ggacgatacc agtacctgaa
     1921 tccgttgtaa catggtcacc caagatgacc aattcatcca cttctctatc ccatgggtgt
     1981 tcggtcacaa tatattcaaa ctcagcaccc ttgtgttttg aaatcacttc gaaggattcc
     2041 caaccgaatt tggctgccaa gctatcaacc aaggcttctg ccaagacata cttacggtca
     2101 gagccagcag gttgaaccaa gacatagtca atgtctgctc ccattgtcaa accgcgagaa
     2161 gccgttaccg taaatggagt ggttgtccag acaacgatgt agctgtttgt atccaagagc
     2221 cccttgccat ctttgacctt gttagcatag taaagagatg ttgagtcaat gtcatggtat
     2281 tcgatttcag cttctgcaag ggcagactca gatgaccatg accaataaac aggcttggca
     2341 ccgcgataga tatagccctt gtctgccata gcaccgaaga cccggatttg agctgcttcg
     2401 tagtcttttg tcaaggtgat gtatggattt tcccagtctg cagaaacacc caagcgttta
     2461 aaatcatcac gttgcttgtc aacttggcta agagcataat cacgacacat ttcaaggtat
     2521 tcgaccaagt ccatttcctt acgtttaaca ccttgttttg ccaagacttg ctcaatagga
     2581 agaccatgcg tatcccaacc tggtacaaat ggtgcacgga agccagacat agacttagag
     2641 cgaacgataa tatctttaga aatcttgttc aaagcatgtc caacgtggat atttccgtta
     2701 gcgtatggag ggccatcgtg gaggtggaag gcaggtttgc cttcattgag ttcttggcga
     2761 cgagcataca agtttgcttc atcccaggcc ttttgccatt ctggctcacg tgttggcaag
     2821 cctgcacgca taggaaatgc tgtcttacct aagttgagtg tttcttttag tttcatcata
     2881 actcctttat tttatactta attccatttt catttcttga ccttctaaac caacggattg
     2941 aaaaccaagt ttttctaaaa tgtacctcat tttatgatta ccgattacat aattcatggt
     3001 aattgtgtgg caacttggat cttccttagc cagaccaatc acttgtcgga tgacttcctt
     3061 accatagcct ctattttgat aatgcctgtc tattaacaaa cgccacacat agtagctctt
     3121 gtcttcttgt atagacaaca atacaaaacc tacgattctc tgccctgatt tgactgcata
     3181 aggaagcaga tgtccctcct cccgatacag ccatgcctga gctaatgaat attcaactga
     3241 cgccactcgg cgctgatctt taggtgccac ttcaagatct agcacctgat caaaattatc
     3301 tttgtttacc agttctaatc gtatcataaa aaatataaaa aactcccgcc aaataaggac
     3361 gaaagttcgt ggtaccacct tagtttagat agagtttccc ctatccctct atgttcgtaa
     3421 cgtgaacgga cgtctttcct tactattttc aggaaaaatc aaacaaagtg atgatccata
     3481 gaaagagatt gtagggcttc caccatctcc tactcgctat aaatatttct accgaccgtg
     3541 tctctgctta tgatctttat tattcttctg ttgaaatttc tacagaatct ccactctcaa
     3601 aagccactgc ctgacgagtt aattctgcaa tttcttctgg tgtcaattga cgtgtataat
     3661 ccaaactttc ttcttcaaca ggtaattctt catccaaagc cttatgaaga acatcacgaa
     3721 aggcttcgtc acttgtttga atgtaacttg ctgttgggcg aaggatttcc tcccattcag
     3781 atgaattaac caatgataat tggctttcca ctgttgattt cagacgctga tggaaaatac
     3841 gtgtcttgtt ttttaattct tcagtctcaa tgacaacttt tttcgcgttg tcagtcgcat
     3901 tacgaagaat tgcatttgcc ttatctttag cttcatgtaa caatgttgcc gcatcatagt
     3961 cagcttgctt aataatattt gctgcttgat cttcggccgc aacctttact ttctcagctg
     4021 tatcttgagc taaaagaact gatttactca atgattcttt catctcatca aaataagcca
     4081 aacgttcccg caaatttttc aattctaact cttggtcatg atttttacga attaaatcct
     4141 cataatcacg tgttacaatg tccaaaaagt catcaacttc atctgcatcg tatcctctaa
     4201 attttgtagc aaaggtttta tcttttaatt ctaatgctgt aagtgccatc tttcctccta
     4261 agttttaaca atgtctaact ttaattttat cttcccttgc ttagaaaaac ctaaaaattc
     4321 atttatgcga actctaccat atctcctaac actaattaat tgccctattt caactaattt
     4381 actggtttgt tctgtcagaa cataatccaa cttcacatgt ccagcctcaa tcaacttatt
     4441 tgcagttgcc cttgaaagat taaatgcgac cgaaatcaat ttatccaatc tcatactgga
     4501 aaccaacaca tcctttgaac gccattcctg tccaatcggt agtcgaacag tcgtccattc
     4561 ttcttccttt cccttaacag ggacacgagc aactttagtg atagattgta aggcaatctg
     4621 cccaaatttc tgatcgataa agacaatcaa tcgttcatca tcaatcaaaa tatcacccaa
     4681 atactccctt ttaatcccta gttgattgag aaaagttcca agaacttgtg aatgggataa
     4741 ggtgtgaaat tttctagcat aggacaaatg aagagcgatt aactcaaagt ccttgatgtc
     4801 caactcataa taagccgggg caataataac ccgcgaatgt tccgtcgaaa caaagtcccg
     4861 actagaaaac gtttgtaact ggtagtagtt agcaattttg catacaattt catcttgtct
     4921 aggatgtaaa aactgagtta atctgtatga atacgtatct tcaacttgct gacacatatc
     4981 cattattttc tctacaaact ctctttcttc cctagaaaaa tgttgcaata agtttttgtc
     5041 atttttcata actatgctaa caggagcaat aattgaacca agaagcgtgt tcccatatta
     5101 agcgcaatca tggctgccat tacggtccaa tccaacccca taaattgcag attaaatcgc
     5161 ctaaagggtt ttaaaatcgg tgctaccagc cattgaatca aacgtccaat cgagcttgtg
     5221 tataggctag gaaaccaact tagcaaagcg tatgccaata agagatagga ataaatttct
     5281 acaattttta atagtaaaaa aatcaaaatt tgcatagcat taccgtttta tatcaaagtc
     5341 aaaatttgaa tcagccgcac cagtagttgt accagcatta gcattgcgca attcttcaat
     5401 attgacagtg acatttactg gagttaacag ccacatggta tttgagacct ttttcaaatt
     5461 tccagataat actgaacgag caccatccaa gtagtctagg caacgtctag cttgttgctc
     5521 cgacatatat tgaaaatcaa taagaatact cgcattatct aataaaagat ttaccatctc
     5581 tggtgcatct tcataacgtt ttggaaactt aatatcaatt gtagttttga caatctcttt
     5641 ttcgttatta ttagtcatca attcttgctg cctttcatgt aggcgttgaa gttgactttc
     5701 tgaacgtgct tcccgacgcg tctctacttt tggctgctgt tcgcgcacag gtgcagctgt
     5761 agtactggca acacgcattt taggacgatc attaggcatt gaataggcat ctgcctgttc
     5821 ttcaacttca ttgacttcgt caacttcaaa gtaattaaat aagttcttaa atgtatcttt
     5881 taatgccata ttttcctcct ctccattatt caaagaatgc tgagccaatt ctcacatatg
     5941 tagctccgtg agcaatggcg cgttcaaagt ccccactcat tcccatactt aactctgtaa
     6001 agggcatacg tggtaagttc cttgtagcta gttcttcttg gatttcctgc attttagaaa
     6061 aaatctcgtc taattcatca tctgtagcat caatcggtgc catcgtcatc aatccaacaa
     6121 gttcaatgtt ctccaataaa ctaatttcag caagtgccgc atcaatctca gatactgcaa
     6181 agccatgctt actctcctca ccggaaacgt tgacttggag gaaacacttg actattttag
     6241 tcgcacgttt atctatttcc tgagctagtt tgacagagtc tagagcgtgg aaataatcaa
     6301 caaatggaat aatgtccttg acctttcttc tctgtaaagt ccctatcaaa tgccatgtca
     6361 attgtttgtc tgctagggca ttatactttt ctaagaactg atcgactcga ttttctccaa
     6421 tatgggtaat cccagtattc actagctgat tagcaataga gctgtcaaca tatttggtga
     6481 cagctattac ctttactgat tcactcggac gacctgcctt ttcagcagct tttgccactg
     6541 ctgaaaagat agcatcctta ttcttttgaa agttcatttt agtttagcga ttacggaaga
     6601 atggtggtgt atccaattca tcctcatctt gatccatttt aaatttttcg actgaaacag
     6661 tggatgttgg ttctgtgtca gttggacgaa tcaagttttc acgacgcaaa tcccactctc
     6721 cgaaggcaga agctttcggc gcttcagttt gttgtgcagc tccacgagtt ggtgctgatg
     6781 ctactgaatg atcaaagcgt tgagaagggc gtggtgagac agcttccgtg cgatggcggg
     6841 ctggtttatc agcagtatct tgacgaacac ccgtagccac aacagtcaca cgaatctcat
     6901 ctttcattgt ttcatcaata gatgtcccca accaaatgtt aacaccttga cccgcagcct
     6961 gattaacgat ttctgaagca tcttctgctt ctgtcagagt catgtcataa ccacctgtaa
     7021 cattgacaat gacatcctct gcaccatcaa ttgttgtttc aagaagagga gaataaatcg
     7081 ccttacgagc cgcctcaatc actcggtcct caccagtacc gataccgata cccatcaagg
     7141 cgtttccttt gttttccata actgtcttca catctgcaaa gtccaagtta atcaaaccag
     7201 gatttgtaat caagtctgta attccttgaa caccttgacg aagaacatta tcagcttcgc
     7261 ttagtgcttc taaaagcggt gttttcttat caacaatttc aagaaggttg ttgtttgaaa
     7321 taattaagag tgtatctact tgttcgcgaa gaccttcaat tccctcaatc gcaaagtttc
     7381 cacgtttatt tccttcaaaa ccaaacggac gagtcacaac tgcgacagtc aacgcaccca
     7441 agtttttagc aatacgtgca ataacaggag ccgcaccagt ccctgagcca ccgcccatac
     7501 cagcagtgat gaagaccata tctgcaccag ttaatacatt agtcaatgct tcttcgcttt
     7561 cctcagcagc tttacgacca acctcaggtt gacctccagc acccaaacca cgagtcaatt
     7621 taggacctag ttggataact gtttcagctt tagagctact tagcgcttgt acatctgtgt
     7681 ttgctgcaat gaactcaacc ccagcaacac cttcttcaat catacggtta atcgcgttcc
     7741 cgccaccacc gccgacaccg attactttaa tgacagcacc atgactagct gctgcttcaa
     7801 atgaaaatgc catagtttaa atcacctttt cttttctctt attcaaacat gctgccaaac
     7861 aaaccacgaa tgcgatctgt gatgtttccc ttagcagctg gacgaacttc ttcttcctca
     7921 tcatggtaag taggagcaac ttgttcctct acctgatcaa ctgtgttcaa ttcgttcacg
     7981 atttctcttt gaattggctg actaatccga ggacgagcaa caggaatttc aactggctta
     8041 tgtctcaagg tagtttcgcc atttactgca tgttgggcaa tattttctac atcttctaac
     8101 tcaccaacat actcaacaaa gctaatcaca cttgcaaatg ctggattgcg gataccaatt
     8161 tgatttggaa cataaagttt agtgttaaca ccaaacactt cttgggccaa ttctgtaatt
     8221 cctggtaaga tagcaccacc acctacaata acaatgcctc ctggtaaatc tagagcacgt
     8281 gtacgctcca aatcttgttt cacacggtca aaaatctgac gtaaacgtgc cgcaatcact
     8341 tctgaaaggt agcgctcggt cacttcaact ggagcgtttt ctccaatcac gtcaacagtg
     8401 aatttttcct tatcacttgc atcttgcgga taggcaatgc cgtagttgta tttcaagttt
     8461 tcagcaatac tctttgaagt tgtcaatact tttgaaatat cgtttgtgat ataatctcca
     8521 ccttcttggt agatgtttgt gtattgcaac tcttggccac gcataacagc cacagtcgtt
     8581 tgaccgccac caagatcaat gacagtcgca ccaaactcac gttcaccttc attcaataca
     8641 gagcgagtta gtgccaacgg agaaattaca atattttcaa cttggacacc tgcacgctcc
     8701 accgttttac gaagattgtg aagaatggta cgtggtcctg tgtacagcat accacgcatt
     8761 tccaagcgaa ttcccatcat tccacgaggg tccttaatgc cttggaatcc atcgacagtg
     8821 aactcttctg gaataaatga aatcacttca cgttccggag tcatactctt tgtcaatgct
     8881 gattttacaa cattttcaac atccaagtct gtaatttctt gtgaatctgt tgtaacagga
     8941 atcatccctt gagtcggttc aatctgaaga aggttggcag gcaatccaac atttaccttt
     9001 tcaatgcgga tacctgactt ttcttctgcc tgctcgattg cttttttaat cgctccagca
     9061 gccacctcaa tatttacaat aattccatct ttgacgccag cactttttac attgctgacc
     9121 ccaatcacat tcatttcgtt atcaatatat tctgcaacca agactttaac ggagcttgta
     9181 ccaatatcta atcccgtaaa aaagccgttc ctagccattc tatcagtcct ctcttacttc
     9241 caactttaac aaatcatctt ccattttgaa aaatagtata attagtcatc attcattata
     9301 ccatattata tcgaattatg gtgtttttaa aggatttttt tattactttt tctttacaaa
     9361 attatctatt tcagcttgca tatctataaa taccaacttc catatcaatt gtcgttggaa
     9421 ctgtcacttc tgccgctatt tttgtatagt aaggcaactt ctggctaatc tcactcaatg
     9481 gaactaaaac cgtgtttcca tctgccatat tgagtgtcag caaatccgca gtcactttac
     9541 ttggcgttaa atttattgtc tgaatagcag aacgaattcc tgcatctatt ttacccaatt
     9601 caatggccag ttccttgatt aattccttgt cggataaatt aatcgttgtg tagccttctg
     9661 gcaaagaatc ctgtgaaatc ggctctccgc caacctctcc actagacaat actggatacc
     9721 actgactttg ttgctgaatg taacctatga tagcgtattc tttaatttga atcgtaaagg
     9781 cagctggaaa ctggaacttg attgttgctg tctctacaga cgaactattc ttcttaatat
     9841 tctttgcgta agcatctgca tgcaaagcta tagttacatt gtaatcatcc ggagagataa
     9901 ggctataatt ttctacctgt tcagcagtca gtcgctcatt tccaacgacc tctatttgtt
     9961 ttttcttgct ggttggagaa ataaaataca aggctagagc tgccagtaac aaactcgtca
    10021 caagaaccgg aatagctttc cagactacct tggaaggaat atcaactttt aaaggctgga
    10081 cctttttctc tgtttctgtc ttggattcca gactctcttg tcttctgttt attccctgaa
    10141 aaaggcccct tttactcttt ttagcttctg ggatcttctg ttctgtctgc ccctcgtcaa
    10201 ctgactgaat atctgcgtca tctttatgag caaggtaggc ttggtggcgt gctttccatt
    10261 gttcgaaaaa ggcacttttt tcatcatccg aagcagtcat ctcaggtatg tctacatccg
    10321 tagaaagccc tttttcttcg gctaatacag attctttctc tgctggtgaa atttgttccg
    10381 aatccaattc tacttgggat gcctgttccg cttctagcac tgattcttct acatttgaat
    10441 ctttttccgt catagaacct accttcccat atcttctcta agcaaattgt aaaaactatc
    10501 tactgactga atttcattag aatttgccat gttttggata taaaattcct tatttttcaa
    10561 tagctcatcg acttctacta acaggctggc aaatgtcaat tgactttcat caatttgctt
    10621 agaataacct tttttctcaa aatactgagc attctcaatc tggtctccac gacttgcttg
    10681 gcgtccaaga ggcacaatca aatggagttg ttgcatagca atcaactcaa acaaggtgtt
    10741 ggaacctcca cgtgtaatga caacatcagc aatattcatc aagggttgat aaagttctgt
    10801 tacgtaatca acacgataaa gatttttttc taatcgattg agactcgcat cccctgtcaa
    10861 gttgataata ttgaaccgct ctgttagagc tagactattc tgactaatca aatcattgaa
    10921 gaccttagct cctcctgagc cacctacaaa caataatgtt ggtagatttt tatcgaagtg
    10981 gctgagaatt tctggcaact ggattggtgt aactttatca ttaacttgcc ccacttttgt
    11041 aacagcgcca acatgtttta ccttggtcaa actagcaggt tgttcaaaag tactatacat
    11101 ggttgtcgca aatttatagg cgattttatt ggccagtccc atggacaaat ccgactcgtg
    11161 gataaagact ggaacacgta ataaattggc cgcaataaca ggaggaactg aaacaaatcc
    11221 accttttgaa aaaagagctt gaggacggat ttttgcaata attgctaagg attgaaggat
    11281 accaaaacca actttaaaca catcaagcat gttttggagt gaaaaataac gacgtaattt
    11341 cccagtcgca atcgagtgga aacgaacatc tagacctgat ttgacaattt gttcatgctc
    11401 aatcccattc ccatcaccaa tataatgaac ttcccaacct tcttctaaaa atctgggaat
    11461 caagagaaga ttgagcgtca catgtccgac tgtccctcct cctgtaaaaa caattttttt
    11521 catgattagt tcaactcctc aaaagtctgc aggaagacat ctccacgtac ttcaaaattg
    11581 gcatacatat cccagcttgc attggccgga cttaatagaa caatatcccc tttttctgcc
    11641 atttcaaaag cctttcttgt tgcatctgca atatctaaaa ctgaaacggt ttccacttct
    11701 gccttatctg ctgcacgttg aacacgggga gctgattgac caaggatgac catgttcttc
    11761 aagccaatta aatcagggac taattcatca aattcattgc cacggtccaa accaccagca
    11821 attaaaatga ccttgctatt gtcaaaacca gacaaggctt tttgagtcgc caagatattg
    11881 gtagacttac tgtcattgta gaaggcaaca ccatcaatct cacctacata ttgcaagcgg
    11941 tgtttgacac ctccaaaggc agatagactt tctttaatgg cttgattttc tacgcccatc
    12001 aatttagcta cgacaatcgt agccaaggcg ttttcaatat tgtgcgaacc tggaacacca
    12061 atttgatcag catccatgat gtattcacct ttgaaataga gttttccatc tgctaagtaa
    12121 gctccatcaa ctacttccag cgtagaaaaa ggaacgacag ttgccttggt ctgtccagcc
    12181 aattccctag cttcattctg gttgaagttg agcaccacaa aatcctcagc cgtcatctga
    12241 cgctgaatca tccattttgc tgctacatag tcttcaacag tcccatgata atcaatatgg
    12301 ctggcaatga ggttggtcac aacggcgata tgtggtcgta aagaatctgt tcccatcaat
    12361 tggaaagatg ataattccat gactaaggta tcttctacag ttgcagtttg agcaactgat
    12421 gaagctggat agccaatatt accacataat ttagcagact tttgaccagc attcaaaacc
    12481 tccgcaatca tggttgttgt ggttgtctta ccgtttgaac ctgtaatccc aacaattgga
    12541 gcctctgaaa tcaaataggc taattcaacc tcagtccaaa ctggaattcc tttttcgata
    12601 gctttttcaa ccattggatt atcatagcgg attcctggat ttttcaccat caaggcaaaa
    12661 tcttcatcta ataattcaac aggatggctc ccacaaatga cacggattcc atcttctaag
    12721 agagattggg ccgttggatt ttcttcaaat ggtttgccat cattaactgt gacaatcgct
    12781 cccaatttgt ccagtaggcg agcagctgat tcacccgact tggccaaccc cagcactaat
    12841 acttttttat ttttaaattg atcaataact ttcataatac ttatccttca ggttttagaa
    12901 actacatact cgagtgaaca atcatctcaa cgattccatt ctctttcagc attcaatact
    12961 aacactttat tttacccttt acagtaacct ttttcaagca agaggataga aaaaccgatg
    13021 cttaagcatc ggtttcagtc aatttattca aatgacgagg gcgtaaacta ttttttcttc
    13081 cttttgaacc attttcaaga taatgaatat ccctcatagc ccaaagccca atcaatacca
    13141 ttaccagccc tagccaaaaa tcagtggaaa tctgcatgat ttttaaaatt ccgagaaaca
    13201 aggcaatacc cattcccacc agtaagaaaa ctgctgctat taagttcatt gtccctttaa
    13261 tatggttagg agccacaaaa atgtagaaga gcactactaa tattgctaga atgagataaa
    13321 acacgctgtt cctcctcaga actattcctc agttgctaat tttttctttt tagcggcctt
    13381 gtcacgttct gccttgttca aaatttgctt acgaagacgg atagattctg gcgttacttc
    13441 catgtattca tcgtcgttca agaattcaag tgattcttca agggtcaaga tacgtggtgt
    13501 cttgataact gacgtttggt ctttggttgc tgaacgaacg ttggtcattt gtttagcagt
    13561 cgtgatgttc actgtcaagt cattttcacg tgagttttca ccaatgatca taccttcgta
    13621 aacttcagta cctgggttga caaagatggt accacgctct tcgatacgca tgatagagta
    13681 agtcgttgcc ttaccttgat cgatagaaac gagggcacca cggtgacgac caccgatctc
    13741 accttgaaca acaggcaagt attggtcgaa agtatggttc atgataccgt aaccacgagt
    13801 cattgaaagg aattctgttg aataaccaat caaaccacgg gctggcacaa ggaagaccaa
    13861 acgtgtctgt ccgttgccag tagaaaccat gtccaacatg tcacccttac gctctgaaag
    13921 agattggata acagaacctt ggtattcttc cggtgtatcg atttgcacgc gctcgaatgg
    13981 ctccatcttc acgccgtcga tttccttgat gattacttct ggacgtgata cttgaagctc
    14041 atagccctca cgacgcatgg tttcaatcaa gatagacaag tgcaattcac cacgacctga
    14101 aacagtccat ttatctggag agtcagtagg gtcaacacgg agagaaacgt ctgtctgcaa
    14161 ttccgccaaa aggcgctctt cgattttacg tgatgtcacc catttacctt cacgacctgc
    14221 aaacggtgag ttgttgacca agaaagtcat ctgaagtgtt ggctcatcga tacgaagaac
    14281 tggaagtggc tcgaccgcat cagttggtgt tacagtttca ccaacgaaga tgtcttccat
    14341 acctgaaacg gcaatcaaat caccggcttt ggcttcttgg atttctttac gctcaagacc
    14401 aaagaaacca aagagttttg taactcggaa gtttttggtt gtgccatcta gtttagaaag
    14461 ggtaacttgg tcaccaactt taacagtacc acggaagaca cgaccgatac cgatacgacc
    14521 tacgaagtcg ttgtagtcca aaagggatac ttggaactgc aaaggctcat ctgagttatc
    14581 cactggtgca gggatatgct caatgatggt atcaaagatt ggcgccattg tttcttcttg
    14641 gtccgctgga ttgtcagaca aagatgaagt tccgttgata gctgatgcat aaaccactgg
    14701 gaattccaac tggtcatcat ctgcaccgag ttcgatgaag agttcaagca cctcatccac
    14761 aacttcttct ggacgagcag aaggcttgtc gattttgttg acaacgacga ttggtgtcaa
    14821 gttttgttca agggctttct tcaatacgaa acgagtctgt ggcatagtcc cttcgtaagc
    14881 atccacgaca agcacaacac cgtcaaccat tttcatgata cgctcaacct caccaccgaa
    14941 gtccgcgtgt cctggtgtat ccatgatgtt gatacgagta ccgttgtaag ctacggcagt
    15001 gtttttagca aggatagtga taccacgctc tttttcgatg tcgtttgagt ccatggcacg
    15061 ctcatccaac tgcgtacgtt catcaagggt ttgagattgt ttcaataatt catcaacgag
    15121 ggttgttttt ccgtggtcaa cgtgggcaat aatagcaacg ttacggatgt cttctctaag
    15181 ttttgtcata atatcctctg tattttttaa tttaactaaa aaagtatatc atagattggc
    15241 gcaaaaatca cagataatct tgttgtaaat gttttcaggc agttgattga gaagaaaaag
    15301 aaaagagatt gaaaatcaac ctcttacaaa atattttcaa aactatctcg cacttcctgt
    15361 ggccatacgc tagattgaac ttcaccgata tgtttcttac gaagcaagaa catggccaaa
    15421 cgggattgac cgatgccgcc accgattgaa agcgggaaga gaccattcaa cagggcacga
    15481 tgccaatcaa attctagacg gtcctcatca cctgtaatag caacctggcg cttcagcgct
    15541 tcctcgtcta cacgaatccc cattgaggac aactcaaagg ctgatccaag cgcttcattc
    15601 caaaccaaga tgtcgccatt gagtcctttg tagcctgctt ctgatgggct tgtccagtca
    15661 tcatagtctg gtgcacgtcc atcatgtggt ttaccatctg ccagttcacc gccgataccg
    15721 attaggaaaa ctgcaccgta ttctttggca accacatttt cacgctcttt gggtgtcaag
    15781 tctgggaagt tctttaccaa gtcctcagtg tggataaagg tgattttctt aggcaaaaca
    15841 gactcaatgt cataacgagc ctccactgcc aactctgtca gacggatagc cttgtaaatc
    15901 tgctccactg tttctttcaa gtaagctaaa ttccggcgac catcaggaat aaccttctcc
    15961 caatcccact gatccacgta tactgagtga atgggatcca aggaatcctc gtcaggacga
    16021 agagccttca tgtgaacaaa gagcccttct ccctcattaa aaccgaatcg agccaaggta
    16081 tggcgcttcc acttagcaag tgagtgaacc acttcatagg tcgcatctgg aatcagcttc
    16141 acattaaccg taaccgcatt ctccacaccg gacaaattat cctgcatacc atccccgaca
    16201 cgactcaaaa tcggcccttg cacttctacg atttctagct tgtctttcaa atactgcgtg
    16261 aatgtatttt tgacgaaaga aatctcctct tgctgatgaa taaagctttt cttcatacct
    16321 tacctcctcg taaatttata caccttatta tactcttttt tacccacttg taaagtcttt
    16381 ttattaaaaa ttctgataat ttaatggagg tttttcactt caagtgtcag cactgctatc
    16441 acaccttctg tcaagcgtct aggaccacgc accgccttga ctcccaagtc catcatgcgc
    16501 gctctcggca acacatcatc agttagttga gcaagcaact ctacctgcat gagtttcttt
    16561 tctgtcggaa tatctgactc tccatgattt tccaagtttg cccccaagac acggcagaca
    16621 tagcgaatag cctgcacagg tgccgtcacg tagatggcta cgatgtcccc agcttgaatg
    16681 gttgattttt atggccaata gactacctta ttttccgcaa actcggtatc aatatcgtag
    16741 acctttggat tggctggaat aacccaataa tctgatccct gctctgcctt gtaggatttt
    16801 ggtcctacca aataccgact tttctcgagg agggcaaaca ccgtctggtc ctccaccgta
    16861 tcatccagca agacagacac ccaagtcttc tttgacatat ggtaggcagg aaagatgcct
    16921 gactgactca gcagctctgc tatttcccga ccgtcaacct tgagattgac aatctccacc
    16981 tcttcttgag aaccgctccc atccagctta tccctcggaa tctgactgac cagggcgtac
    17041 cacttgttat tggcagggtg gcgaaaggcc ccataggtcg gcaacttggc aaaaggatag
    17101 tcaggcaggt cgccccactg ctccttgatg agctgggcta tgcggttgct ttggtctttg
    17161 gtaaatggca gagcgacaca gcaggcctcc tctacccgag ccaaaatgga ctgataagcc
    17221 tcacgcacct gccccacaaa agccccaact ggcgcagtca ccagatgggc ggtatagacc
    17281 tcctccatct cacaatccca aacataggac gacagctgac cagcctcatc gacttccacc
    17341 accgcctcaa actgcccctc catgaagacc tcacggtagg tgtaacgatt gttggagagg
    17401 ataaaaccga aaggaatgag agaggggagg tggattttat aagaattaac tgaagacata
    17461 ggcatagttc tctcttgaaa caaaatcaat aaaatctaaa attaaagttt atcaaccaaa
    17521 tgatattcaa caatatcttt ggttttccga attacttttc taaattctag ttgttttaag
    17581 ggattagaaa taatagtaag cttagaggaa ctttctaaat ttgaaacgac agaaagaaag
    17641 taattcgact tataaaattc agcttgttga tactctttta aagttagtcg aatatccccg
    17701 tgttttcccc taattccctt tacctcagct aaataattat tctttcctac actgagctga
    17761 aaatcatatc catcaccata caaacgagca tcctctatag taccactttg gaaaacggac
    17821 tctttttgat aattgttcat aaagtacaat tcagcttcta gtcctgtttc ttgtaatctt
    17881 ttgaattttg acttcactat aggactttca attaatgtta tttcctttac attatgaact
    17941 ttctgaaggt acaacttaac gatgttggca taatttacaa catcttcatt tccaaacaag
    18001 ctatcaatta gttcttttct agggcgataa tcttccattc tttgccacca tccactccgt
    18061 ggatttggaa agaatggatc aaaaatatcc atcctattct tgacaacact tctagtctca
    18121 gcgattccta agtcaacaaa atattgataa aaatctgttt tagtcttgaa cccaaattct
    18181 ttgataaatt cattatcgaa tttagctaga ccatagccta atagatttaa tagttcgtaa
    18241 tatttgtgac ggtttctatt tgacatatcc ttacccccac ttatgcaatg tttcttcaaa
    18301 aagattatta tatctattta tattccccct gatttcatta cacttaaccg aatcatacgt
    18361 tattattctg ccatcttgat tttcaatttt aaatccatgc actccatcag tttttgcatg
    18421 agctaataaa ttcctttcct ttaatatatt tgaacggtaa ttgtccacaa agttgtcgta
    18481 tctttcatca tacttgtcat catttgaaga ttttaacatc ttaaatattt tatttactac
    18541 cctagcaagt ttgtctgaat ccataacata agcccgttct tgttctaaaa ccgccttcaa
    18601 atacccctca gaagcactag tcgaattttg atgaacttta cttattttat tataaaaatc
    18661 tctcccttgt ttttctacat acctatctaa actatttttt tcgtcttcag ttgctaaatc
    18721 aagatatttt gaaataatta atttcatctt ttgatcaaaa acactgacat tattcatcaa
    18781 taaaccacgt atacttagaa cattttctgt ttttaaaata tttttgtcaa taattttttt
    18841 agccttaggg ataaattcgt aattctcacg actacaaaca tatgtcccct caataaactt
    18901 tttagataat tgatcctcaa tatcattttt ctgaactgag taaaacaata tatctgacaa
    18961 aatattttgt cttctaatga cttctatagc tgaagttcct tttattgaac caagtaaatt
    19021 taaatctatg aaaatgacat caaaatgctt ctcatgtaat aacttgacta gctgttcggt
    19081 attcacagta tcaaatcttg taacctttaa taaaaaattc ctatccttta catatctttc
    19141 tagtttacga taaatattat tataccaagt tgtcgtatcc tcaaaccata aaatatttaa
    19201 atcaatactc atttaaaaaa cccaattcta aacagaatcc cctctcattt ttttcatgta
    19261 attttatata acctccattc tcttccataa cacgcttaac atgagataag ccgaccccgg
    19321 tactttctgt tgttgtatag cctaattcaa atattctatc cggggtaatt atggcggaag
    19381 agagcccctc cccatcatct ttaaattcca taaccgtata aattccattt gtgtaaaaat
    19441 ctaaatctat attacttgca cctgccttga aagaattatt tactaggtta tcaacaacta
    19501 gccctagctc agcagtatta aattttattt tgtttgttaa aatcttttca ggctggtatt
    19561 taaattttat tttactatat cgatctttgg taggcttaag taaatctttt atatattgct
    19621 caataaactc ttgtagtata aaagactgag tttgatcaga taatcgaaaa tctgctgaga
    19681 atgctaaatc ataaattttc ttaattttct gagcagaaat agtgatccca tatatatcct
    19741 catccacctc agcaataatg tctgttgctt gatactcatt taatatctga ctaattgaat
    19801 taattgatag ttcaatacta tcagactctg tatacatagc atgtagagct tccgtcgcat
    19861 tctcaaattt tggatttgtc aattttctta aaaataaagc ctgcttactt gtaatcttca
    19921 attcttgttc tgtaaccaac cgcttttctc gctcaacttc ttttgcgact tctgcctgcc
    19981 tctgcttttg ttgagcctca atcttttctc gctcagccgt cttacgagca agttctgcct
    20041 ccctacgttc ttcttctgca atctttttcg cttcttcttc ttgtattctt ttttcctcaa
    20101 gagctttttt ttcttttctc ctaatttcat caacttcttt acgaacaact gaacctatat
    20161 ttgcacgctc actaatcaac ttattaacaa taggtttcaa caagtcaatt aacaaagtaa
    20221 tacgttcatc gtttcccgag agaccttctc gattagttgt cgaaatatct tccaatctat
    20281 catgatccaa aacgtcaaat gaaatttccc cctctatgta agcaccaaat gcttgagtat
    20341 tatttaacaa gggcataaaa tctgaaacag ctaatttatc acgaacatat aatctcaatt
    20401 gattagcttt ataaacttga ttccttataa atctgtcctt tgtatccgtt ccagtatttt
    20461 caagagcttc agacatattg attgtactat ggataccaat ccatcctgtt agctcgtaag
    20521 taatttcttc tagctctcca tcaatattca gaaattcctc tttaccagtt aaactaattc
    20581 ttgatatctc agaaggatat attcttttta cctgacgcag tttatttgac acttcctcta
    20641 aatccgcact tatctttacc gaatcattta gcagatccat attgaccact gttttatctg
    20701 tttgaaaaaa ggcataaaaa tttttaaatc caatgacctt agaaactttt gaaaactcta
    20761 tagcctgatt tacatcggtc ctatacgcta cttcaatgtc tgccccaaga ttatccaaaa
    20821 gatagtagtt tgccaaagtc atcttcaaag actctagttt cccttcagca aaacccgcta
    20881 aattgacacc gacagacttg attagcgtac cgctctcaat ttcatcccag atttttgtat
    20941 tctcaatatg tacatcatcg ataggtactc gcactagttc aggtatgtca ctgtctaatg
    21001 cgtcagttga atctaacatc catgcacttg caatgccatc tttctttgag actatataat
    21061 attttttaga aagaaataac gttgctaatt ttccgattcc tttcctcccc tttgtttttt
    21121 ctgataaatc ttcacttgat aaacgtttat tccgaccaat cagagcatat tttgtagata
    21181 aatcatcata gtccattcca ctaccgttat caataatttc taagatagaa ttttttttat
    21241 caatagattc aatatagaga tttaccttag tagcacctgc atctagtcca tttgcaatta
    21301 attcagatat agcactccat ctattggtat acatttgctt tcccaataaa tttagtgcat
    21361 aatatgaaaa attaaactga attttatcct tttcaatcat aacaattcct ttataaatta
    21421 ttctctctaa aaaaatcagc tattctattt gctaaatata tacttagaat tggagggact
    21481 gcatttccaa tctgtgtatt cactgcttca aaccctccaa taaaaacata gtcatcagga
    21541 aaagattgaa tcctagctcc ctctcgtgcg gttagagcac gattttgact gggatgaata
    21601 catctcaacg atgatggggt tgataaatta ttagtgattg tggttgaagg tctgtcccac
    21661 cacagtcgtc catatgtatt actatacccc gaagtaagaa acaattcttt gggtaatttt
    21721 ccttcttcaa ccatactgtt tatatcatct tttccttgtc cctcttttag agcttccatg
    21781 attttaatca ttctatcacc atgtcgtcta ctagcatgat tttttaattc tatcgtattt
    21841 cctctcatta attgctgata aaccgttacg ggttctcctt gatagctatt catagtctca
    21901 ttatttccta aaagaggtaa atcacttatc gcttctctta atgttatagg atgttcatta
    21961 gctatactat ttgggaatcg ccactctaca tctaattgta aatcatttct cacaccaata
    22021 ataaagacac gttctctatt ttgaggaact ccgaaatctt tagcatttag tacctgaata
    22081 tgtaggttgt aaccattcgc atcattaaag tcagaaaaat cttgaaagct ctcttttaca
    22141 tcttccaaaa caggcttttt atcatcattt ttcattgtca ataagcctaa cacattttca
    22201 aaaacaaaca tctttggttg caaaaatgat agcagtcttc tatactcctt atacattttt
    22261 gccctattat caaattgtct ctttccaacg gtactaaatg attgacatgg aggtcctcca
    22321 atcaccaagt caatatcttt tatatttact cctatattag tcaagtaatc aatattaaga
    22381 tccgctatat ctccttctat cattgggata tcaggataat tctgcctaaa tgcttcagct
    22441 gcattcttat caaattcgtt ggcaaaattt attttaaaat catctctcct aacaaaagaa
    22501 ttgtcaacaa ttcttttttg aaaaccaaat gttagtcctc ccgcaccgga gaataaatct
    22561 acaacattaa tcataaaata tccttacttt tacagtgtaa ataacttgtt tattgtctta
    22621 tcaaagcata aaacaacccc tattttagat tataccacaa aacccagcca ttttaggctg
    22681 ggcatttatc atattctacc tacttaacca gttttttcat ttcttcaatc cgtcctacta
    22741 tcacatcata tttattgtca tcaatctcga aatttttatt cttcattaaa tttttcaagc
    22801 aactcctcag cgatagcttg actttccaac ctcagcaaac tagcttggtc atccgaatga
    22861 tatgtaaaag gggataaatt gccataccaa acgagattac tatctaagat aactgcggtc
    22921 gtaccaatcc tttctggtac aagcttcacc tttacattgt cactgtttaa ccccattagc
    22981 cactcactta acttatgatt tttggaaaca tgaataacta cttgttttcc ttgtaactgc
    23041 cccaatagtt cttgaaactt actagaagta agcgtatgta attgtaaata tgctgttgag
    23101 caagtgttcc gcaaatcctc tctaaatttc tcctcgtaat ccctaccact atataatact
    23161 tgggtttgct ccttttctcc aacttggtat gccatttttc gataggctat ctgacgtttc
    23221 tgatacattc tttcaagata aggaacgagt atatcaagat agtcaactat tctcacctca
    23281 gttttgcctt gatagggacg gtgaagccgc cctgcatact gtatgagatt atttttccaa
    23341 gacaaaggag ctgccaaaat tagtgtatcc aactttggca tatcgaagcc ctctccaata
    23401 aattttcctg ttgaaatgag gacaaatgga ctattctcat ctagctcact gattcttttc
    23461 aggagttctt tcgtatctct tcttttactc gctccactca gacaaaaaat attggtcatt
    23521 tctttttcaa taagcagctt ttccaatagt tctatatgtt cccgtcgatt gactaagaca
    23581 agtatatttc gcttttcttg atatagtttg aaaatatctt gcacaatcaa agtattgcga
    23641 tgtaaatctt tggcaagcca atcattaagg gctgcaaagt tcgtactatt cgactgttcc
    23701 aagtccaatt tcccaaaaga tgttagacgg agtagtaacc tctttttaaa atcgtattgc
    23761 cctgattgag cagtatgtaa aattggacca atcctttgaa aaacaattgg ttggtgtccg
    23821 ttttttcgtt ctggcgttgc tgttaagcca tatagatatt gaccagcaaa ttgagcaact
    23881 accctctcaa actgcaaggc tgtcacatga tgacattcat ccacaatcat catatcgtaa
    23941 tccgacaaaa agtcggaaat agtgtccaat tggaagagag attgaatcat aaccacatcc
    24001 accaatttac tcctccattt tttagaagcc ctatattgcc caatatgccc tattactttt
    24061 acacgccctg aaggagtata gcgaaccgcc tctttctctt caatctctaa aaattcaccc
    24121 aacctttcca accactgctc caacagttga cgattgtgaa ctaagataat cgttctacat
    24181 ttcctctggg caatcaaggc tgcccccaga actgtcttcc cgaaacctgt ttcagcacat
    24241 agcaagccat tctcactagc taataaatct gccaaagcaa gttcctgctc aaaacgcaac
    24301 ctccctttga aagaaatctg aatcggagat aaactgttgc gattgtccct aatagttact
    24361 gtttcaaata tttcttgtaa gcttgcaagt attcctcttg gaagatgcaa tgcttcatcc
    24421 gtttcttcaa ataaatagat gcgttctgga gtctgataag ttggctgtct agtcgcttgt
    24481 tttaaataaa attcaggatt agaaaaagat gccagctttc tcaataaata atttgtcttc
    24541 gaagaaatag tcctcttctc aactcgaata acgtttgata agctacaatc taacactgta
    24601 tcatctacag aatctgaaaa ctcctgtcct aagaaatcta gtattttctt ctgttcaatt
    24661 ttcttaatct gttgaagata actccattgt tccaaatagg gctgaaaatg cctatcaaca
    24721 aaaacagttc ttcccttctt gaaagcttcc ccttgtaagg gcagtgcgat aagattgcca
    24781 aatcctccct tgggcagaat atcttgattt ggaaacatac ggtcaaatga agaaaagcga
    24841 atatcttttg actcctgcat agccaattcc agcagtcttt ttccaacatt tctcgcctgc
    24901 tgacaagcaa tttcttcctc gaagaaaaac cagagatgag caccattgcc agaacgagag
    24961 atttcaatat gaccctcaaa accatatttt tctgcggtat ctcgtagaat ggatacttct
    25021 tctctccaat tctttttatc aaaatcaatc accaaaaatg aacaggtatc tgatagactc
    25081 atcggaaaaa tgccaatact catttcgcca cgtaggtgag ccaacaatac ctgtttggtc
    25141 aagggttgac aagttctctt ttcaacagga agttttttcc aaccatagtt gtaagaagga
    25201 aaatagttga tttttccatt ttcatcaata taggatttcg cataaacatc tacacgtccc
    25261 ttaaataggc tgaacagaat ggagagtttt tcatcggtac ttagttgatg tttttgttct
    25321 tcaaagtaat catacaaatg cttatcactt accagaaatt gctgattgtt atcttgaaat
    25381 tgcattaaat tcagaatctt atcggtagca taatagggaa aacgagcaag atgcttcgca
    25441 accttacccg ttgatttttc ataataatag gacatgtgag ttcctccaaa ttgcctaaca
    25501 agcttatcaa cgaaaagtca aaagcccaag tattcactgg tctatttccg gattgaaaac
    25561 tatcctgtct ttattgatat tcatctatcc ccaactcctc gtacatcctc tcacttgata
    25621 gatcattctg accgttcaag aggagatttt caaagaaggc ggttaaaaag gctgagcgtt
    25681 tattgactaa cttagcattg tcaagtacaa gggcatctcg aaagtatttg gcatgttttt
    25741 gaaaaggttc gttgtcaatg tcgaaaccaa gtgagcgaag gtatttgatg agaaatactg
    25801 tgattgttct agtgttccct tctcggaatg ggtggatttg ccaaattcct gaaataaagg
    25861 attggatatg ggcaacaatg gcttttttat ctaatccagc ataagaaaaa tccctttctt
    25921 gctggaaatc atagtccaaa gtggcaacaa tcaagggaaa atctgaataa atcacagtgt
    25981 ccccctttaa aactggctcg ttttttgtaa tgttaaccgt tcgatactca ccaattggaa
    26041 cactgctatc aaaaatatcc tgaaagagct ctttgtggat atgtaagaga gtggttggtc
    26101 ggaggctaaa accattttgc gaaagcattt caacaattcg gagagagacg atatctgctt
    26161 cttgcgtact ggcatcagtt gactggtggt atttcgtaat ttcctcgtac acctgctcat
    26221 aggtgtactc tccacgagct tgcctatccg ccaactcctc catataaaca gacggagtca
    26281 acccatccac tttttgaaga ccaaaaccag tttcccagag ttcttgcttg gcttcgtagg
    26341 aaagattggg attatcaatg ttgtaagttg gttgcataga ctcctcctgt ttgaatttct
    26401 agccttatta taccacaaaa cccagccttt taaggctggg catttagtta atctagtgcg
    26461 gttaaaatca gcttgagact aggaaacgac accgcagaca gtacttgagt acggcaaggt
    26521 gagttgacga agtatcaagt ggttttagac cactagacca gtttcttcat ctcttcaatc
    26581 cgtcctactg tcgcatcgta ttttgcttgg tagtcggctt gtttttcttt ttctttttca
    26641 acgacttctg gtttggcgtt ggcgatgaag cgttcgttgc tgagtttttt gccgaccatg
    26701 tctagttctt tttgccattt ggcgagttct ttgtccagac gagccaactc ttcttcgacg
    26761 ctgaggaggt cggcgagtgg caagaagatt tcagcaccgg tgatgacggc tgacatggct
    26821 agttctggtg cagcgatgct tgagctgatt tccaactgtt ctggatttgt aaaacggcgg
    26881 atgtagtttt catttgcctt gaagaaggtt tcaagctcag catccgccgt cttaatcaaa
    26941 atggtaatcg gcttagaagg ggcaacattc acctctgctc tgctatttcg caccgaacga
    27001 atcaaatcct tgaggctttc cactcccttg tgagcttcag cgttttcaaa ggctgggttg
    27061 acaacagggt aggctgccac cacgatagat ccctctgcat actgggcgaa gatttcttcc
    27121 gtcacaaacg gcatgattgg gtggaggagg cgaaggattt ggtccagcgt gtagagaagg
    27181 acagagcggg tcatgacttt ctcagcctcg ttgtcgctgt agagcacttc cttggtcagc
    27241 tcgacatacc agttggcgaa ctcttcccag atgaagttgt agaggatgtg accagccaca
    27301 ccgaactcga acttgtcgaa gttttcagta accttggcaa tggtttcatt gaggttgtgg
    27361 agaatccagc ggtccgtcac gttgccagcc tcgccagctg cgactttggc aacattttca
    27421 cgcgccgcat ccaaggtcaa gccttcattg ttcatgagga tataacgaga aatgttccaa
    27481 atcttgttga tgaagttcca tgacgcgtcc attttctcat aagagaagcg gacatcctga
    27541 ccaggggcag agccgtttga caagaaccaa cgcaaagcgt ccgcaccgta tttctcgatg
    27601 acatccattg ggtcaatccc gtttccgagc gacttggaca tcttgcgacc ttcttcgtca
    27661 cggatcaaac cgtggatcag cacgttcttg aatggctgac ggccggtgaa ctcaagcgat
    27721 tggaaaatca tgcgtgacac ccagaagaag atgatgtcgt agcccgttac caaggttgag
    27781 gttgggaagt aacgctggaa gtccgccgcg ttttcgtcag gccagcccat ggttgagaat
    27841 ggccaaaggg cagagctgaa ccaggtatct aggacatcct catcctgtac ccatccgtca
    27901 cctgctggag cctcttctcc gacgtacatt tcgccagatt cgttatacca tgctggaatc
    27961 tgatgccccc accaaagctg acgcgagata acccagtcgt gtacattttc catccattga
    28021 aggaaggtat cgttgaaacg tggtgggtaa aattctacct tatcagctgt atcttggttg
    28081 gcaatggcat tcttagccaa ctggtccatc ttaacaaacc actgggtaga caagcgtggc
    28141 tcgactacca cacctgtacg ctcagagtga ccaacagaat gcacacggtt ttcgatttcc
    28201 acaagggcac ccagttcttg caacttggca accgttgtct tacgagcttc aaagcggtcc
    28261 atgcctgcaa attcgcctgc gagctcgttc atggtaccgt catcgttcat gacattgact
    28321 tgtggcagat tgtggcgttg accgacaagg aaatcatttg gatcgtgagc aggcgtgatt
    28381 ttcacaaccc ctgtaccaaa ttcaggatcc gcgtgctcat ccgcaacgat cgggattggc
    28441 ttgttgacga ttggcaggat aacattttta ccaatcaagt ccttgtaacg tggatcttct
    28501 gggttaaccg ccaccgcaac gtctccgaac atggtttcag gacgagttgt cgcaacttga
    28561 agggcacgag aaccatcttc caacatgtaa ttcatgtggt agaaggcacc ttctacgtcc
    28621 ttgtggataa cttcgatgtc agaaagagct gtgcgagctg ctgggtccca gttgatgata
    28681 aattcaccac ggtagatcca gccttttttg tagagttcta caaagacctt gcgaacggct
    28741 tttgacaagc cttcgtccag agtgaagcgg tcacgttggt agtccaaaga cagacccaac
    28801 ttgccccatt gctcacgaat ggtcgctgcg tactcatcct tccattccca aactttgtcg
    28861 aggaattttt cgcggcccaa gtcataacgg gtcacacctt gctcccgcaa gcgttcctca
    28921 accttagcct gtgtggcaat ccccgcatgg tccatacctg gaagccagag ggtgtcaaag
    28981 ccctgcatgc gtttttggcg gataatgatg tcttgaaggg tggtatccca agcgtgtcct
    29041 aagtgcaact taccggttac gtttggtggc ggaatgacga tagaatacgg cttagcctcc
    29101 gcatcgcctg acggcttaaa gacatcttgg tccaaccaag tttggtaacg accagcctca
    29161 acctcggctg gattgtattt tggtgataat tcttttgaca ttagtttttc tccttaactt
    29221 ttttattaac taagtacaag ttttgttaca tgcagataaa tcaaagattg tctttatctg
    29281 atccaaaaaa atgtttaata agagctaccc caactagcga tgagaatcct ccaaaaatcc
    29341 atttaaaaat tgttttttct ttgtcatctt ttttattctg gcaatcaaaa caaagttttt
    29401 tatcatcccc taactctctc ttacattttt cacaaaaata tatattagtc acagtcatca
    29461 agttcctcct tattttgaga tatgataagt tgttctggaa taaaatgaac ctctaaaaaa
    29521 tcatcattat tggcaataaa ttctgttaaa gattttgttg attctagcac ctcactcgaa
    29581 aaatacttaa atggattttt tgagttcgga ataaattcgt ctaataaaag tgcatctctc
    29641 ccagagaaat catctaatat aatattctca aaatctagta aacaataaaa taacgcctca
    29701 tattcctgca attccgttaa acatcctatt tgaaaactaa aagcatcttt caaatactgt
    29761 aaattcatta aacatgtttc tgctaattca ttagcatcct tagtataact tttagatgtc
    29821 catttttgaa gctgatttct atttctatac tcctcgtact gtttttcaat tttataccta
    29881 gaatcataaa tctgttgtaa taacagattt ttagcgttag tagcctgaga ataggcttcc
    29941 cttagtaatt gttttcttgt atcctcatct tgaataagaa gggcggtctc atatttttct
    30001 ttagcagata aaacttcggc atacctgttt aagtcaaaat ttctattgac ctgatttatt
    30061 ttactttcta gcaaatccaa ttttgctgaa agatcttcta gtttttggct aagtccagct
    30121 gtagctatac ttgaaccaag ttctaccgga actgatttta ttggcacttg agcaaacatt
    30181 ttacctgtac tagaatccac tagggtcgcc aatgactctc cagttttatt ttttctcatg
    30241 aatcgaatag caccagtggc aagcatttca gagaactgag tcatatctag ttcgtatcgt
    30301 gaatttttct gtaattcttc caaaaataga ggagcattat ttagttgcgc cttaattttt
    30361 tttaccaaga tattttcttt ttgttggtta tacaattcga cattaaatgc acgtcttctt
    30421 attggtgaag gcgggctact ttcgcttgaa attatctcat tttgtcttgt aaacatattt
    30481 cctctacagc acctcaataa attttattca ctgtacattt ttttccgaac agttggactt
    30541 atgaaaattt tacataaatt gaaattacta tctttattca tatctactcc cccaccaact
    30601 caatcttaat cccatccggg tcttccaaat agagggcgta gtggtctggt cctcctgcgt
    30661 ggggatagcg gtcgtcgtag agaagtttga ctcgtctggt caaaaattcc ttccgccatt
    30721 ggtcaacatc atcaggtgtt cccgcatgaa aggctagatg attgagacct atacggcaac
    30781 ggtgataact tgcctctagg aaatcctgtg gcgtttggac aaagaccagg tactgctctg
    30841 cttttttgta agatagccct tcctcccact cctgatagag cgagtagccc agcttggtca
    30901 ggagaaagtc gtaaaatgca cgcgaagttt ccaagtcaga aacgtaaatt tcaacatgat
    30961 gtagcatatt tctcctttcc aaatgaaaat ccccgcctag acttgctaga cagggacgaa
    31021 gttattccgc ggtaccaccc ttgttcagat agattatctg cactttgctt attcgattca
    31081 catcctcagc aaccagtttt gacatttgtg cggatttctc agtaccaccg cttcctgtga
    31141 caaatggggc tcaaaacacc tctgaatggc tttattgtaa caaattgcac cttgaaaagc
    31201 aagggattta agctttcaac tcaatccctt tttctttcaa ctgcttgatg gtagcaggcc
    31261 cgatgccttt aagagccaag agctcttttt ctgtatggtt tgcaaagtca gacacagatt
    31321 tgatacctgc ttcataaaag gtttccaaac gcgctgccgc aatgccttcc aactcaggaa
    31381 gtgccaaaaa gtcttccaat gaagtcgctg aagaagtcac ctctgtggca acttctttca
    31441 cttgttccac agcatgctct actacagcct cagccttgtg agcaactgtc tctactacct
    31501 ctgcagctct ttcaagacct acacgacccg cacgtttcaa gtctgccaac tgttttttca
    31561 attgtttttt tcgattcact ttcttttttc ccatttttca tctctctccc gtctgattaa
    31621 taatgccttt gaccaaacaa ctcatctggt aaatcatgaa aacctttgcc agcatggtag
    31681 ttggcaaatt ttccttgaat gaatcgatag gcatccagct tgctctcata acgaatataa
    31741 gcatccgctg cccgctcatc cttgtcttct tccaagacac gacgactttc ttcaaccgcc
    31801 atctcgttta ccatgacctg agtgttgacc caagcctcaa attcttttaa aaattcttgt
    31861 tcttttgtca ttattttcct ctttcgcctg cttcgattga aacacaccgg tttattatac
    31921 catattttct agaaaacaca agaaaaccct aactgtaaca cagttagagt ccccattttt
    31981 ttaccaagta aaacgatagg tcgttttaga caaaaattct tctccttgtt ctaacaaaat
    32041 cgaaccaaat ccatcgacat tgcatgcatt tggcaaggcc tgacactcta aactaaagac
    32101 accatggtaa caggccaaag cttcaacagg aaaattatat gtatatataa cgaccgcagg
    32161 ctggttggtt ttgacactga gtccaatttt cccatctgga ctcaaaactt ctaccggaat
    32221 atccacctct tccaataacc atgggtggtc atagcctttt accaatacat tttgaggata
    32281 ttggccatca aatccctgag caaaaggcgc aaaatctcta aaatcaaacg gcgtccctgt
    32341 cacatcttct aagacacccg tgggcaggtt atcctcccca agcggagcat agtgattggc
    32401 cgcaatttta atacggtgct cggcaactga ccgttgaaaa tcaccagtca agttgaaata
    32461 gatatggttg gtcggattga aaatcgtatc cttatccgat acagcccggt actcaaccat
    32521 gagctcattg gcatctgtca gacgataaat tgccttgacc atcacatcgc ctggaaaacc
    32581 attgaaacca tcttttaagg taataccaaa ggtaacttga tttctctcat ggtctaactc
    32641 agcgtcccag tactgctcat ttgccgttcc aataccacca tgcaaggtcc gacccggttc
    32701 attttctgtc aatggataaa cgtgtccacc aatttccacc tgagcatccg aaatccgtcc
    32761 tgccacaggg ataatcgttg ccccgggata gggatccgtc tgcaaatatt cctcagccgc
    32821 ccccgctccc aaactgacat ttcgtaaatt gccaccttct tccacaggga ggaacactcc
    32881 caccactcta gctccaaaat ccgtcaaggt tacttgcatc ccattcttgt tttccaagca
    32941 atacagtttt gcttttttac caaatgtttt tacttcaatc atttcttttc ctcacaagcc
    33001 aaatgaggga gtcactattg caactccctc aggatactta aagcctatca actatagaac
    33061 agtttataat taacgaaaat caaatccgtc tgtaacaatc ggctgagtta gcctcactct
    33121 cttatttcta ggctcgggct gaaacagtca cttagacttc cctcgctctc ttatttctaa
    33181 gctcgggctg aaaaactcca ctggagtttt tcactcatct tcatcacttg ttaatagact
    33241 attgacataa actaggttgc ttgtcccaaa ttctacataa tccacagcct ctcccagcag
    33301 gacgccgttc aagaaaccga taaccattgg catgttcatc cctgcataaa ggtcaaaccg
    33361 cccaccttca atcaattttc gtgatacgac attggctggt gtaccgccta acaaatctgc
    33421 gaagacaacg aagtcatcta gattagcaat tgtttcttca aattttttct ggaagtcttc
    33481 tggaccttct tctggtaaaa gagctactgt atagatatcc tcctgaggac ccataatcat
    33541 ctcagtagat ttcttcaact cttcacagaa gataccatga cttactaata ctaaacttct
    33601 agtcattatg ccataccaaa tacgaagtga ccgattgcag aaagtccaac tgcaagtgcg
    33661 atgataatca agatggcttt agtcgaagtc atgccacgac gaccaagaag ccagaagaca
    33721 aatcctgtaa agacagctgg aacaaggcga gggaagattg tgttgagcaa gtcttgaatg
    33781 tcaatcactt tctcacctac atgtggagcc caagtcactt caaagttaat catggttgca
    33841 atcaaggcac ccatcatgaa gacacccatt acagaagcag catctacaag agctgtcaac
    33901 ttatcacgca tagttgtgat gagtttagtt ccctctttgt aggcaacttc caactgtttc
    33961 cagcggaaaa tatcatatgc aacagccacg gctacccaaa ggaaaatacc taccggagaa
    34021 ccttccttac ccatagtcgc tgccacagta cccataatcg ctggaacaag agaaccaaag
    34081 atagagtcac cgattggggc aaatggaccc atcaaaccag tcttaatacc gttaaccgca
    34141 tccttagaag ctacaccgtc gctttcttcc aaagccaagt caatacctgt gataatagtg
    34201 tggaagaatg gtgaagtatt gaagaactgg gtatgcagtt tcatcatttc cttcaactca
    34261 ggagtaccat ctccatacat tttacgcaat tgtggcaaaa tcatgtagag gtagccagac
    34321 gcttgcatcc gctcgtagtt ccaaccaagt tggaaagtga ataaactacg tttgttgatt
    34381 tgattaaaat cttcttttgt taatttgtaa ttagatttcg tcatcttcaa tttccccact
    34441 ttctgaattt gatggagcaa ccacagttac tttttggcta tttttgaagt gaagcactga
    34501 aaggaatgca cccacaatag cgataccgat cattgacaag cctttgaagt tgttaacaaa
    34561 agctacgcct gcatcttcag gaagagtgcc aacgatacca gcaactgcac cacccaaagc
    34621 tgatacgtta ccgtaaagaa cagtcaacat agctgtaagg gcgaaaccta ccgccaagta
    34681 gtgaaggtta cgtttaagtg gaaggtagtg gagcaagatt gcaaatccaa gacctggaag
    34741 catacgagct gcaagcgtca aaccattggc aatccattgg tattgttcaa tagttttaac
    34801 cattgcatct acaaacccac caccaaaagc aagagcaagg aagactggaa gtgcacgaga
    34861 aagtgcccaa ggaattgcac caagcaagta gttgcgttcg ataccagcgt agtcaaagcg
    34921 ttcaatcgca gcatctacac ggtgtgcaaa gaaagtagtt gagaaacgac cagcaatatc
    34981 tgtataaaca agaagtgctg ctactggaac cgcgatagta gataccgcaa gttcagggtc
    35041 aataccttgt gatacagaga aggcagttgc caataccgca ccagaggttg cgtcgatacg
    35101 agatgcacca ccgaaagtac ctacaccaag taccatgagc tgcaagctag caccgattgc
    35161 caaacctgtt gccatgtcgc ccatgattaa accagagatg aaccctgcaa aaactggtga
    35221 tccagctgac gatacgatgg tcagctcatc acaaatctgg taagcagagt agagcgttag
    35281 aagtaatatt tgccaccatt gcataatagt gatcctcctt taaatttttc aaaaatatcc
    35341 gaatgttatc taaccttatc caataatggc ataaagtctt ttggtgaatc gccaggtacc
    35401 atttgtgcaa ataattttac acccttagcc gccaaggcat caaaatctgc aatatcctta
    35461 tctacaacgt taatagaacg agttacagaa cgagtttctg gtgattgtga catattgccg
    35521 acgttcaatt cagcaagttc tacaccatat tctaccaagc gaaggaagtt ttctggacga
    35581 cgagcaacaa tcaagagacg ttgcgcatca tatttgcctt ccttgatgtt attggctgct
    35641 ttttcgattg gcaaaataga taattttacc cccggtgggc aagccaattt caaaccttgt
    35701 ttctcaatgt cgttttgagc aaccgcatcg tcaataacca tgatacgact aatatttaat
    35761 ttagtagtcc aaaggttagc aacctgaccg tgaatcaaac gaccatcaat acgcgtagca
    35821 ataattgcca tacagtgttc tccttttctt cataaatctt tctgttagat gttctctgca
    35881 gaacacctac acctctttat aaacgggttc ctgtgaaaaa ctaatcttct ctctatattt
    35941 tccttccgtc tcaaagacga cgatttcatt ttctcctttc tttaagtatc cttttggaat
    36001 atagagatag aggattgggc ctttttccca gaaacgtccg atatttacat tattaacgaa
    36061 aacaactccc ttaccaaaac ctgtcatgtc taagtaagta tccgcaagtt catctagttc
    36121 aaactgataa cgatagaaag cagcttgacc ttcctcccag cccttactaa aatccaagtc
    36181 ctcaactgac tcaagatgca aaggataggt ttcccaatga ccaataaaat gtaaatcagc
    36241 catcgcacct cgaccaagcc ctttagactg ggtaggagcc gttagtttgt gcccataatt
    36301 gacacgtccc atattttcta ccaaaatatc taatgttagc ttgtcatctt taaaatccaa
    36361 ttcaacatcg tcaccaatct ctgtctgata ctgagttgca acgaattttc catctgcata
    36421 aatttggata cggtcacgcg catcaaccac tcggaaacgt tccgcttctg tcttatcccg
    36481 ctccaactct gttctatata aaatataacc tgttgactga tcaagttctt ccatattctt
    36541 aggataaaac ccttttacgc aatcgcttac attttctaga gtagcaaata aactcacctt
    36601 atcatgaagc aacacatctg aaaaagcttt tgcctctttt acaagcggtt ctgcatactc
    36661 taattcagga tagacttctt tcaaacgttg ttgcaaaata taaaacttct tagtaggatt
    36721 tccagcttca tccaatatag catcataatc ataagaagtt acctgaggca aatcaatttg
    36781 accacgagca gagcaaccat tcatgaaacc aaaatttgtt ccaccatgaa acatgtacag
    36841 atttaaggaa cccaattcga tacattccat aaccgaatca accatttcct ccggctctct
    36901 acgaataatt tcatcgcccc aacgattgaa ccaaccatcc caaaattcca tacacatgag
    36961 tggccaattc ttctgatgtt cattaaagaa tgccgtcata tttgcaaaat tctctctagc
    37021 tttagaacca aagtttcctg ttacaaatac atcgtcctct atcagtgttc ctgcacgtaa
    37081 tgttgctcgc caagaaccgt ccgaggtaaa caagggagca gttagaccat gtttacgcat
    37141 caagccagcc accgatttta gatactcctt ctcctcacca taagagccat actcattttc
    37201 cacttggaac ataagtacat ttccaccctg tgcgagttgg agcttggcca atttaggaat
    37261 aagagaagcg taatattcat ctaagtgctg caagtacacc gaatcactcg aacgtactct
    37321 aagctcttcc ttcatcaacc aagcagggag gccaccccat tcccactccg cacaaatata
    37381 aggggaagga cgtacaattg cataaagccc taattcttga gccaatttca aaaatcgctc
    37441 aatatccaat ataccctcgt aacaaaactc accctttcga ggttcatgca tattccaagg
    37501 gacataggtt tcaaccgtat taaaaccaag ggcctttaag ttatacaaag aatggtacca
    37561 atcatcagga tggacacgaa aataatgaat cgcgcctgat aaaatcttaa agggttcacc
    37621 gtctaaataa aattggtctc caatataaaa ttctttcatt tcttcctccg atgcaaccgc
    37681 ttacctttct attaatatac taacacttat ttgtggttat gtccagtact ttttaaaaaa
    37741 tttttacttt ttttttgcaa acacatctat ttcatcagtc agaaagggat tacatctatt
    37801 tttttatgga tttcagctat tttttttgat ttccatcaat taatttagta taatgagtta
    37861 cggaaaggga ggaaataagt atgaaagtac ctaagtacca gcttgtacaa aatgacttac
    37921 gtcagcaaat catttctggt aaatttgaaa atggcgacaa attttacaca gaatctgaat
    37981 taacaaaact atttaacgtt agctctatca ccgttattcg tgcagtaaac gaactagtta
    38041 aagacggcta cctcgttcgt caacaaggta aagggacctt tgtatcccgt tcacgcaaag
    38101 gacggcttgt agaattttct gatattgaga tttttccgat ggataaggat aaggttactg
    38161 ttctctcgtg cgaaaaaggc aataaacccg atatccttga aaaactaaat cttgacaaga
    38221 atgagtttta ctataaaatt gtacgcgtcc gcgcagcaga agacactcca tacatcttcc
    38281 acaattcata tatcccccaa cgatatatcc agaatcccga tgctccactc gagcactatc
    38341 aatcaatcta tcaacgcttc aaactggact acaatatcca catgtccgag gaaccatttg
    38401 tagaaacaaa tgaaattgtc agcccatgtc caaaagaggt tgccactcat ttgaaattaa
    38461 aagcgactga accagctgta ctacaaaaca aaacaactac taacagtact agcggtgaag
    38521 tgatggaata tactgaaact tacaaacact ggaagtatta caaatttgaa attacagcca
    38581 atcatcgcta aaaaaaaacg cagactaacg tccgcgtttt tttgataccc aataacaatc
    38641 aaaagtagcc taggaaacga aaccgaagat agaactggat ttcatcaagg ctcttgacaa
    38701 cgaataattt tgattttcga agagtattaa ttctaatatc cccgttgatg gctaatcttg
    38761 taacgaaact ggtccgctct agcaatacta aacgtaaact cgataattct attcttatca
    38821 ttatacgttt ttcttaccaa atgaagcact ggactattgc ttggaattcc gagtatctta
    38881 gcttcattat ccaaagcaat acttgcatag aactcttctt cagctagtcg aattgtctga
    38941 ccataatcct caagaaagat ttcatagagt ggtttttccc tcatcctgat ggctgttaag
    39001 gcaggaaata gcgaggcagg aacatatgtc ctttccaaca tcatcggaac ctcatctgca
    39061 agtctcaaac gttcaacttc aaacacttcc tcaccctgac taagttgtaa atgctgcaca
    39121 atatagtctg acgccttaac caatttaaag gataaaatag atgtcctcgg tactttccca
    39181 atttttttca tttgctcagt aaaactatag gcctgagaca aatcaactgc agtatctgaa
    39241 atctcagata cataggttcc cttaccatgc ttcttataga ctaagccacg tttttccaat
    39301 tcttgcaaag ccaaacgaac tgtaatacga ctgacaccat aaacctgtgt caactcacgc
    39361 tctgaaaata acttgtcatt cggagccatc ctctcacgaa ttgcaacttc caattcatca
    39421 accaactgca aatagagagg tttttcaaca gtttgactaa ccatagactc ctcctttcta
    39481 acccacataa gcttacaaat ctattttaca ccaaatttca tatattaaca atatcttagg
    39541 tgataaaata ccagctcttc aagctaaagc aaggtcacct catctggcaa agtaatggtc
    39601 tcttttccct gcttgtccat taccaagatt gttgagggat aaaaaggatc aaaacgacta
    39661 cttagatcta cagccagtac atttttataa ccttcctgcg aaaagaccag cgtaatctta
    39721 ccacgacgat ttttgataga aaaacggatt acatttttca aaggaataac cccttttaag
    39781 tagtgatcaa taacatacca gaaactatca atcacttccc caggaagtga ggtcacaact
    39841 ccaaaacttg catagcgccc atttgtttgt tcaaaggcca taagcccctc ctttacaata
    39901 agaaaaaagc ctgtaaaaca ggattttctt ttctaacttt atctacttct cagttctaaa
    39961 tagcgtttgt accagatatt aacgtaggct ggagagaaag gaccgcgctg gttattaatc
    40021 caatcaacca gtatcttgac attttccttc aaaataaaat caatatcatc cgaatacttc
    40081 atcgccttac gatgacgctt atattcatcc acatccagca atctcttttc accatcagca
    40141 aagaccttaa catctaggtc ataatcaatg tatttgagtg cctcattgtc gagaacatat
    40201 ggactagcaa ggttacaata ataggaaact ccattttcac gaatcattgc tatgatattg
    40261 aaccagtatt ttttatgaaa ataaacgatt gctggttctc ttgttaccca acgcctacca
    40321 tcattttcag tcactaaggt atgattattg actccaataa tagcattttc cgttgttttt
    40381 aataccatgg tgtcacgcca agtgcgatga atttcaccgt catgcttata actttgaatt
    40441 gtaataaagt cgccttcctt tggtaatttc actttgttac caactttcta caattacaat
    40501 ttatcttgac tattatatca tatttttcta acctaggcta aattttttca cagataatca
    40561 cgaaggacag cctgaatccg atcaaagtca taaccctttc gagccaaagc ctgtatcaac
    40621 ctttgcttca attcgtagcc ttcatattta cgactatatt ttctatactg cttatccagt
    40681 tccttggcaa ttaaggcatc ttcattttcc tcatcagcca caagttccaa ctgacccagg
    40741 ctttgtttgg ccgtctcata agaaaaaccc ttgcccatca atccctgtac aactttatct
    40801 tgcaaagctc gaagaggcaa ttttctttgg tatctaccca ccaatttctc cccaatcttc
    40861 ctagcaagct ctgaaaaatc ttcctctgcc agccttttat caatcagcag tttagaaatt
    40921 cctttctgca tcaacttctg acgaagcata gctggtccct tatctccatt taaagcattc
    40981 tgacgaacat agctatcaac ataattctca tcgtccagcc atttttcctc ttctaatacc
    41041 gtcacaatct tgacaatatt gttttcttca atttcatatt tttttagata atcactaact
    41101 tcttttttgg tacgttgctt gaaggaaagg taataaagtg ctagattttt cccataagaa
    41161 aactgagcaa aatcgcgaag ctcacgaaac tcctgctccg tgatttcctt tcccttacta
    41221 agcatgaagc gaacaattgt gtcttccgta atatataaac tatcctgacc atccacttca
    41281 agtaaataaa gacgtttctt cttttcaatt tttgtaattc tcattctttc attatacagg
    41341 atttttcggt aaaataataa tatgaatcta caagtaaacc aacgaatccc tttaaaaatc
    41401 aaacgaatgg gcatcaacgg agaaggcatc ggattttatc aaaaaacgct agtctttgtc
    41461 cctggtgccc ttaagggaga agaaattttt tgtcaaatta cctcagtcaa acgaaatttc
    41521 gttgaagcaa aattattaaa aatcaacaag gaatcaaaat tccgtgtcaa gcctgcctgt
    41581 gacatctatc aagcctgtgg tggttgtcaa atcatgcacc tccgctatga taaacaatta
    41641 gacttcaaac aagatctctt gcagcaggcc ctaaaaaaat tcaaaccagc tggctacgaa
    41701 aactacacta tttatccaac aatcggtatg gataagccta gccactatcg tgccaaatta
    41761 cagttccaga ctcgatcttt caaagatcaa gtcaaggctg gtctctatgc ggaaaattcc
    41821 catcgcttga ttggaattac gaattgttac gtccaagatg ccgaaacaca agagattatc
    41881 aacggaatcg caaagctact caccaagcac cgtattccta tttataatga gcgcaagcaa
    41941 catggaatcc gcacggttat ggtccgcaag gctcgaaaaa caggtcaagt tcaagtgatc
    42001 tttgtcacct cttgtcaggt taatcttatt aaattaattg atgaactcac cagtcaattt
    42061 ccaagtataa tcactattgc tctaaactgg aataggcaga aaacgagtga tatttatggt
    42121 gaaaaaacag aaattttatg gggagaacaa gctatcgatg aagctgtttt agattacgaa
    42181 ttctcactat ctccacgggc attttaccaa ttaaatcccc aacaaacaga aattctctat
    42241 ggcgaggccg tcaaggcttt ggatatttca ggagatgaag acttgattga tgcctactgt
    42301 ggcgtgggca caatcggctt cgcctttgct aaaaaggtca aatctgttcg aggtatggac
    42361 attattccag aagccatcga ggatgctaaa gcaaacgcta agcgaatggg actatccaat
    42421 acccactatg aggcaggtaa agcagaagaa atcattccaa agtggtacca agaaggctac
    42481 agggccgatg ccttggtagt tgatcctccg cgaactggac tcgacgaaaa gctcctcaaa
    42541 accattttgg attacaaacc agctaaaatg gtttatgtat cctgcaacgt ctccactctt
    42601 gcaagggacc ttgttgagct aagcaaagcc tacaaggtag aatacattca atctgtcgac
    42661 atgtttcccc acacagcacg gacagaggcg gttgttaaac taagcaaaaa ataaaaggcc
    42721 tataagacta tgacgggtaa acccactatg gtcatataga gcctttttga gtgtagaaaa
    42781 aagtccccta cgacctacac tgatactcat ttaaaatcaa aaatagccac ctaccactca
    42841 aagtagatat ggagcgtttt gattttgtta ttttttgaga agaaaacagc tacttgaaat
    42901 ccacaatcct caactcaaac tcataaatta aggtttcaca tgttataagt aaattagact
    42961 tgctattttt gatttttatt gagtatgaaa aacaacaaaa ctcacatttt ccaacaccaa
    43021 attagaaaca actaacaatc tcatcaaagt cattaaaaaa aatgcctttg gtttcaggaa
    43081 gatgaaaact agaaaaacgg attttgatgc tttgaacagt gaaaagctga ggagagctct
    43141 tttcagctca tctcctaaaa acaagaaaga gagaacgaat ttcgtcctct ctaggtgtta
    43201 gctgttcatc tacccactac agttgacaaa gagccaaaaa aagaacattg ctgctctctt
    43261 acaataatcg ggaagacagg attcgaacct gcgacacctt ggtcccaaac caagtactct
    43321 accaagctga gctacttccc gatactatta aaaataaagc tcccctaacg tctccattaa
    43381 gcgagtgatg caccctagag gagtcgaacc tctaaccgcc tgattcgtag tcaggtactc
    43441 tatccagttg agctaagggt gctaactatt ataatcttca tgccgaggac cggaatcgaa
    43501 ccggtacgat gttgccatcg caggatttta agtcctgtgc gtctgccagt tccgccaccc
    43561 cggcctctca aagcgaacga cgggattcga acccgcgacc cccaccttgg caaggtggtg
    43621 ttctaccact gaactacgtt cgcaatcttt cctaatgccg gctacatgac ttgaacacgc
    43681 gaccctctga ttacaaatca gatgctctac caactgagct aagccggcta aattatattt
    43741 ctcctatgcg ggttaaggga cttgaacccc cacgcccgaa agcgccagat cctaaatctg
    43801 gtgcgtctgc caattccgcc aaacccgcat atgactcgtg ctgggctcga accagcgacc
    43861 cattgattaa aagtcaattg ctctaccaac tgagctaacg agtcgaaaat atgaagcaaa
    43921 ctccgtttgc tctatctcca acttcaaata gtctcccaga ctatttgaac ggtcccgacg
    43981 ggaatcgaac ccgcgatctt cgccgtgaca gggcgacgtg ataaccgcta cactacggga
    44041 cctatgggag ttaacgggat cgaaccgctg accctctgct tgtaaggcag atgctctccc
//
LOCUS       DASFQS010000008        33702 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.008, whole genome shotgun sequence.
ACCESSION   DASFQS010000008 DASFQS010000000
VERSION     DASFQS010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 33702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33702
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.008"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            156..494
                     /locus_tag="U1041_000400"
     CDS             156..494
                     /locus_tag="U1041_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767530.1"
                     /translation="MESIVGIIVIVVVMAVLVYLLINMWKIRATSAGQTDDTTLYFVR
                     FKGVNPPDLANSSVFNQVAKIKCAKGDTYQVTSTVNDVKLRDVIMDEFQLKSSEVVVY
                     YPPRLFFYAS"
     gene            672..986
                     /locus_tag="U1041_000401"
     CDS             672..986
                     /locus_tag="U1041_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003037418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIB"
                     /protein_id="HEM4767531.1"
                     /translation="MVKALIICAGGMSSSLIAKKTQTLLEEQGHTVEMNAVGVPEGGK
                     KINAAEYDLYLISPQTKMHFKQFEEAGKKVGKPVVQIPPQAYIPIPMGIEKMAKLVLD
                     NI"
     gene            1033..3006
                     /locus_tag="U1041_000402"
     CDS             1033..3006
                     /locus_tag="U1041_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM4767532.1"
                     /translation="MLNTKEKMILQYLYQHQNGFSTSKVLAEHLSYTDRTIRTYIKKL
                     ISEISEEETGFAILSKQGYGYQLRISDEEKYHRFLSENQLVFGVDYSDAENRHKQILN
                     KLIFEEECILFDDLADQLFVSRSTLSHDFKHIREHLASYGLSIESKPYKGVYVVGEER
                     QKRHFIMDYFFSEHFYQNIHHFLSNDKSLALPLSFEELTIVVLDECRDSQLKLSDYII
                     QNLVIHLGLAIQRYQKGFTISPVTIDKEKYAEELAVATKIARRLSHRLEPQNRFPEEE
                     VVYIALHLISKTQLEVEKSSDRHLLRQALFEVLGRYDDEYGYQFSHDFSLIEGLLTHL
                     EVLVERLRHNLHIDNPLLDDIKTTYHDIFDLTQSLMAELSVFHSYSLSESEIAYVALH
                     LMASLERQKEKYKLNVLVICATGYGSAQMLKNRIKNELGQQVSISDVIGYYDLDNQKL
                     QGIDVIMSTIDLSGLVFKVPVITVSVFLTDQEVKEVKQRLADLRPSLQKPQVVERESN
                     LEKYFDQYFSEQRFLVVESAEKEMLLKQMISQLESEGLGNHQEFYKLIEARESLSTLV
                     FDKDIAVPHPLKPISEKHMISVAVIKNGLYWEEDYGQIRLVFLVSPSIYTNEGLSTIT
                     NRLVDLVDLPEVKKDIINSPDFETFKHVFLQRE"
     gene            3017..3331
                     /locus_tag="U1041_000403"
     CDS             3017..3331
                     /locus_tag="U1041_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIA"
                     /protein_id="HEM4767533.1"
                     /translation="MNTEELQMAAFGIILSSGNARSVIHEAFAAMREGDYDKAEELLE
                     AANADMLEAHHSQTGLLQEYASGTEVKVEIIMVHAQDHLMTTMTLREVALEMLALYRK
                     VG"
     gene            3346..3858
                     /locus_tag="U1041_000404"
     CDS             3346..3858
                     /locus_tag="U1041_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767534.1"
                     /translation="MSKGMASKKLQKTPEQLKQESKRKSQLFNRYMLFRYSLAVFFFA
                     NLYWLLVQLFQPSLYLILPSLMLIAIIIATAEQFKLYSAEESRLTKTEFVLKAQAILQ
                     GLIVVLVILGHISTLFPTFSNHTSAKLFVIGLQLLGLALVVLNIKRLEQVKQNTDKYY
                     LRFQIIRKYL"
     gene            3878..5227
                     /gene="celB"
                     /locus_tag="U1041_000405"
     CDS             3878..5227
                     /gene="celB"
                     /locus_tag="U1041_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIC"
                     /protein_id="HEM4767535.1"
                     /translation="MEEQKGFFGLLDKYLMGPMGKLASYKVVRAITAAGMAAVPFTIV
                     GSMFLVFSILPQAFSFWPIVSDIFAASFDKFTPLYMVANTATMGVLSLYFALAIGYEL
                     TKIYAEEEELNLTPLNGALLSLFAFIMTVPQIIFEEGAMSAVSSLEEGAIIVDGWAMG
                     GGVTRFGTTGIFTAIIMAVAAVLLYRMCVKNNWVIKMPDSVPEGVSRGFTALIPSFVV
                     AFFVIFLNGVLVALGTDIFKVIAIPFSFVGNLTNTWIGLVIIYLLTQALWVVGIHGAN
                     IIFAFVSPIALANMSLNAAGERMIVAGEFSNMFVIAGGSGATLGLCIWLATRARSEQL
                     SAIGKAAIVPGIFNINEPLIFGLPIIYNPALAIPFMLAPIASMTVYYFSMKLNLINAV
                     VAQVPWPTPVGIGAFLGTADWRAIVVSIVCAVVAFLVYYPFIRAYDKQLLKEEAANA"
     gene            5633..7099
                     /gene="ascB"
                     /locus_tag="U1041_000406"
     CDS             5633..7099
                     /gene="ascB"
                     /locus_tag="U1041_000406"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM4767536.1"
                     /translation="MTKQFPKGFLWGGATAANQYEGGWNLGGRGPATSDTYIAVDPDK
                     RKDMSHFGKPVSRADVEFALADQEGLYPKRWGSDFYHRYKEDIALFAEMGFKTFRLSI
                     AWSRIFPKGDELEPNEEGLAFYDAVFDELNKYGIEPLVTLSHYEFPLHLALEYGGWKN
                     RKVIEFFVRYAETVFKRYQGKVKYWLTFNEINILGMVGYLSGGLLFEDGKNDLEAMYQ
                     AVHHQFIASSLATKAAHEIDPENKVGCMLARMENYAATCNPDDVLAALKKDQENLFYT
                     DVQVRGAYPSYMKRFFKENNIHVVFEPGDEAILKQYPVDFMSFSYYMTSITRALPDKD
                     KATAGNLILGEANPYLEASDWGWQIDPVGLRITLNKLYDRYQVPLFIVENGLGALDKV
                     EEDGSIEDSYRIAYLEKHIQQMYEAIEDGVELMGYTPWGCIDLVSASTSEMSKRYGFI
                     YVDADDQGNGSFDRSRKASFYWYKEVIASNGANVLTEK"
     gene            7108..7710
                     /locus_tag="U1041_000407"
     CDS             7108..7710
                     /locus_tag="U1041_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4767537.1"
                     /translation="MTKTIYLMRHGETLFNTQKRVQGWSDSPLTERGIVQAQSVGQYF
                     KEQGIVFTSAYSSTQERATDTLKLVTDAPYQQLKGLKEMNFGIFEAREEELLPKPRPG
                     ARSFEDLLEPFGGEDIRAVGSRVKEAILSVAESDPADPILMVSHGAAIWGLVQVLEVT
                     FPPGIFLPNCAICQLTVENGEIRFEKLIDSAHDFKVYDFK"
     gene            7722..8339
                     /locus_tag="U1041_000408"
     CDS             7722..8339
                     /locus_tag="U1041_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4767538.1"
                     /translation="MNYLYLMRHGQTRFNLQGRIQGACDSPLTDLGKEQALAAHQYFQ
                     EQGIEFDKIYSSTQERACDTAELVTGRMDYIRLKGLKEQDFGAFEGQQEYLNPPLQGD
                     IGYGDYFVTFGGESYQDVRQRMVETIGGIMEEADNQSVLVVSHGAAIAQFFRQVLTDF
                     PRVRMRNCAILTFTYEDGHYDLQSIVDPVNKETLYQKEGKEKEKK"
     gene            8336..9775
                     /locus_tag="U1041_000409"
     CDS             8336..9775
                     /locus_tag="U1041_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM4767539.1"
                     /translation="MTVTKVFPKGFLWGGATAANQCEGAYDVDGRGLANVDVVPIGED
                     RASIITGRKKMFDFEDGYFYPAKESIDMYHHFKEDIALFGEMGFKTYRLSIAWSRIFP
                     KGDELEPNEKGLQFYEDLFKECHKYGIEPLVTITHFDCPMHLIETYGGWRNRKMLEFY
                     ERLCRTLFTRYKGLVKYWLTFNEINMILHAPFMGAGICFEEGENEEQVKYQAAHHELV
                     ASAIATKLAHEIDPENKVGCMLAAGQYYPHTCHPRDVWEALQEDRENYFFIDVQARGY
                     YPNYAKKKWERAGIEIEMTDQDLALLKEHTVDFISFSYYSSRVASGDPVEKEKTAGNI
                     FASIKNPYLDASEWGWQIDPLGFRITINSIWDRYQKPLFVVENGLGAVDTPDENGYVE
                     DDYRIDYLRQHVLAMRDAIVEDGVELLGYTTWGCIDLVSAGTGEMKKRYGFIYVDRDN
                     EGKGTLKRSKKKSFDWYKKVIATNGADVE"
     gene            9858..10847
                     /locus_tag="U1041_000410"
     CDS             9858..10847
                     /locus_tag="U1041_000410"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014677692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HEM4767540.1"
                     /translation="MKYIVNNSNDPAYNIALEAYAFKELTDIDEIFILWINEPAIIIG
                     KHQNAIEEINKEFTDEKGIHVVRRLSGGGAVYHDLNNLNYTIISNKADEGAFDFKTFS
                     KPVIDTLATLGVEANFTGRNDLEIDGKKICGNAQAYAKGRMMHHGCLLFDVDMSVLAS
                     ALKVSKDKIESKGVKSVRARVTNINNELPEKMTVLEFKDAILNQMKQEYPDMDEYVLS
                     EDDLARIQEIRDTQFATWDWTYGQTPEYTVERSVRYPAGKITTYIKAEKSVIESIKIY
                     GDFFGIGDVSDIEDLLVGTRYEYADVLAKLQEIDTTHYFSRMTTEEVAKAIVA"
     gene            11019..11309
                     /locus_tag="U1041_000411"
     CDS             11019..11309
                     /locus_tag="U1041_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEM4767541.1"
                     /translation="MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKAWE
                     KRRLAYEIKDFREGLYHIVNVEANNDEALKEFDRLSKINGDILRHMIVKLDA"
     gene            11321..11815
                     /locus_tag="U1041_000412"
     CDS             11321..11815
                     /locus_tag="U1041_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM4767542.1"
                     /translation="MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGER
                     EADFINVVIWRQQAENLANWAKKGALIGVTGRIQTRSYDNQQGQRVYVTEVVAESFQL
                     LESRTAREGQGGGYSAGNSFAGGNDYNSPYQAPAQSTPNFAREESPFGASNPMDISDD
                     DLPF"
     gene            11848..12087
                     /locus_tag="U1041_000413"
     CDS             11848..12087
                     /locus_tag="U1041_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002983142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEM4767543.1"
                     /translation="MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFISERGKI
                     LPRRVTGTSAKNQRKVTTAIKRARVMALLPFVNED"
     gene            complement(12403..13059)
                     /locus_tag="U1041_000414"
     CDS             complement(12403..13059)
                     /locus_tag="U1041_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 domain-containing protein"
                     /protein_id="HEM4767544.1"
                     /translation="MSFTEINGLTKKNQEFIHIATNQLIKDGKSDSEIKELLEEILPT
                     IIEKQKTGVTARNLYGAPSEWAASKTISEQEKKDQVEYNENPWLMWLDSSLFMLAIIA
                     GINGLMNLLGQGAQYGLLTLLVIGFGVGAGMYFMYHFVYREQIKTGQRPKLLKAIAFL
                     GLATLAWSVVFILAALIPAAFNPVLPPLVTILIGAAAFGARYLLKKKYNIRNAMSPVQ
                     "
     gene            complement(13075..14019)
                     /locus_tag="U1041_000415"
     CDS             complement(13075..14019)
                     /locus_tag="U1041_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004250490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM4767545.1"
                     /translation="MKQIFLSTMTDLEEIQTFEPGAWINLVNPSQSESMEVAEHYKID
                     IADLRAPLDAEESSRITVEDDYTLILVDVPILEERNNKTYYITIPLGIILTDDAIITT
                     CLEPLPLFEQFIHRRLRNFFTFMKSRFVFQILYRNAQLYLSALRTIDRKSEEIEKQLH
                     EATRNEELIVLMELEKTIVYFKASLKTNERLVKKLASSSRLLRKYEEDEDLLEDTLVE
                     TQQAIEMADIYGSILNSMTHAFASIISNNQNTIMKTLALVTIVLSIPTMVFSAYGMNF
                     KDNIIPFNDVPYAFWWIILFAFAISLSLTFYFIRKRWF"
     gene            14639..17464
                     /gene="uvrA"
                     /locus_tag="U1041_000416"
     CDS             14639..17464
                     /gene="uvrA"
                     /locus_tag="U1041_000416"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003037804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEM4767546.1"
                     /translation="MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFD
                     TLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTA
                     TEINDYLRLLYARVGVPYCINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKK
                     GQHKTIFEKIQKDGYVRVRVNGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRL
                     FDSIEAALRIADGYVIIDTMDEKEMLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCS
                     DCDGLGMKLEVDTDLIVPDASKTLREGALAPWNPISSNYYPQMLEQAMNHFGVDMDKP
                     FEELTEEEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYT
                     RTVMKTYMNELTCGTCHGYRLNDQALSVKVGGEKGLHIGQLSDLSVADHLQVIEHLTL
                     SENEATIATPIVKEIKDRLSFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLS
                     GVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLIDIGPGA
                     GVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLDRRVGNGRFLEVTGAKENNL
                     QDVTVRFPLGKFVAVTGVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHL
                     DRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRC
                     EACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHYKEKNIAQVLDMTVNDAVE
                     FFKHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYIL
                     DEPTTGLHTEDIAQLLKVLARFVDDGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGT
                     VVATGTPEEVADNPASFTGQYLKMKLK"
     gene            complement(17494..17667)
                     /locus_tag="U1041_000417"
     CDS             complement(17494..17667)
                     /locus_tag="U1041_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767547.1"
                     /translation="MAFKLKSDKKETEIKTIRFPSELVDRIEEAIVKKDVSFSSFVIQ
                     ACDYALNNMDKEQ"
     gene            17806..20706
                     /locus_tag="U1041_000418"
     CDS             17806..20706
                     /locus_tag="U1041_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4767548.1"
                     /translation="MVYSRTQRIQEEKKQRLRYGIRKFTGLGAASALLGVGLLTSLSV
                     HAQTKTAEVRYDYVTTEELTEAEKKAIFTELPAQVTEDVNYYLVYRKVGSSILPQTGE
                     STGVLAGAIGAGLLLVGVTVGRKNQRMVRSAMTLTLVGGSLVFTSVSAVTVAQLAQYG
                     QAQTLTVGAALPDGKISIAGYEFVGYLEGKKQSSDTSPTLPTGSIDKAEENENLLVQP
                     TQPADENKSDIPTESIPSEDKVTDSPAESTPSEDKVTDASAEQKPSEDKVEEVPAESK
                     PAEKPVEETGGGQVIGTEDKVISETEKPVQPEIPAPVEKPAVPGETETTVTPGEEKPV
                     SPELPTNPAEPDRPVDTVRTDVEKQVTVIKYGTSYVKDTSLPAGESKVLTQGVDGKQT
                     VTTKVTYTNNVETAREIVATETIEPVTEVIAYNDEVSKNLEELIESLATISFATERRA
                     NADLEVGSERVLVAGVNGQTKTLTKKVYDSTGAVISEEVVSTEVIAQPVTQVIEYGTK
                     PKSVVETTEETKVTELDYTVETRQNPDLEKGQTRTLTKGRKGTLTQTYRITKTNGNET
                     ARELVKEERVEPVNEIIEVGTKAVVRYQTRQETSVIPFTTETRQVDSLFEGESRELVA
                     GVDGQQIQTYKDTYVDGVKVASEMVGQPEVIQPIKRIVEVGIKKEETSQVLTETEVLA
                     YTSIKEEDPNLPEGETKIKVQGVNGERKVRITRVTNNRTGQVSETREVISETAPVNEV
                     LVVGTKPASTSLLDKKTLTLDEFMSLTEEQQDAFIAKKGTVPGTTIRTGATKDTLEKV
                     EQLINLDKLNAEFVSLLNAARAAEGLSAVTYAGQGSDAQNAATARANEMADHGSLRYQ
                     GTADGAHKRPDGSKWTTIYTAEQTARQGWRGENALQMGSSLSAYSAINESRIANNLFT
                     EWMNSAGHKAVMMKNLDNLQVAVGIGLNDKAIETTFNQGVTVAMLELVEPKP"
     gene            20764..21852
                     /locus_tag="U1041_000419"
     CDS             20764..21852
                     /locus_tag="U1041_000419"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767549.1"
                     /translation="MKKNFLKLLVAISTLSLVACGQTDQTGQVNQETSSSTQKVTESS
                     STTKSEKVVSSPDDFPRVDEHTEIDAEAKQAVKDYVGFYSGIVDIPSAETSHAPDDNL
                     TVFYKIDFAINEDGSYELYLERDVPGSQIGHLYVTKDNQMNAKLKVGELHQGKFELEY
                     GQLLLSEGPSLTQGFLGEDGDLLPMYGFYGSDTPTNYLGVTDNDEIVVKDGKVQATFY
                     LSAYADKATVIDLEKQTTRPASLKYSTEQISQYSAEHYKELGMASEVTYQYNTVNEFL
                     QALRLRHTTQKKTLEKIKVVDGSSLTGYYTSDNKEIKNIKFAIFDGISNSYYVYTGDK
                     VYQLENEHEAKEIKVIPELIDYISYSVG"
     gene            21865..22212
                     /locus_tag="U1041_000420"
     CDS             21865..22212
                     /locus_tag="U1041_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767550.1"
                     /translation="MKKLLPLILTSVTVFFLVACGAKNDNGTYTYSREKDGTTYTVII
                     KIENNTGTLTFEEKGEDGQTQSEEQGLTVDQERKTLTAENDNSTVDYEIVDGVLTLDT
                     LDSTLANAEFTKE"
     gene            22344..23690
                     /locus_tag="U1041_000421"
     CDS             22344..23690
                     /locus_tag="U1041_000421"
                     /inference="COORDINATES: protein motif:HMM:NF018584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HEM4767551.1"
                     /translation="MQSEYVLLCSPYRYSSVFANSVNRQFIEKELMSVVMPGVNIMTR
                     GLLRTMLETNYGITDYSSLKEEIDKLEDGRYHALEDVSSFIDGIANPDVKDFYFSLNS
                     LTGSQLIKGFDDCRIIDVLTKSYATRLITKEEFEELFTKQTERIKNSYQTWEQYLASC
                     VMGKLLQYVPSSETITSVEEYVVDVYSFCIAPTNVFSYGTFWANHELANLTALLENFL
                     PEEIVKELKSRQDRVDYKGEIPGLTAPSNDLLASLEGTSIDPTFIDYERYQYLSELAD
                     YVFWTPLIENNLEWMIAEKNLQEQDTILLPKEYASLYSARVFWYHYPSYKELHEEHIF
                     AMFEGTLSLNLIFTEEAVYTFKKKLFGKPALVRIPWEQVELSSSLNLWMEESKIHFGK
                     KTISNVSPVLSEIGLNSKAIDDLDSQERKALENEWQQKMNQFLEGIPQRIREFKGK"
     gene            23804..24658
                     /locus_tag="U1041_000422"
     CDS             23804..24658
                     /locus_tag="U1041_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010925605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEM4767552.1"
                     /translation="MIQLQRTQPTLQPFTKWTGGKRQLLPVIKSLMPDNYNSYFEPFI
                     GGGAVFFELIPKKAIINDFNSELINCYRQIKDNPQKLIELLVEHQKNNSKDYYLELRS
                     VDRDDRIHAMTDTERAARIMYMLRVNFNGLYRVNSKNQFNVPYGRYKNPKIVDSELIL
                     SISQYLNKNNIEILTGDFEKAVEDVGAGDFVYFDPPYIPLSETSAFTSYTHEGFSYED
                     QVRLRDVFRKLDKKGAYVMLSNSSSPLVEELYKGFNIHKVEAIRTNGAKASSRGKISE
                     IIVTNYDK"
     gene            24648..25454
                     /locus_tag="U1041_000423"
     CDS             24648..25454
                     /locus_tag="U1041_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000794288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEM4767553.1"
                     /translation="MTNNEYKYGGVIMTKPYYHKENSILVHADTFEFLSKMKPESMDM
                     IFADPPYFLSNGGISNSGGQVVSVDKGEWDKVSSLEEKHNFNRRWIQLAKKVLKPNGT
                     IWISGSFHNIYSVGMALEQEGFKILNNITWQKTNPAPNLSCRYFTHSTETILWARKNY
                     KKARHYYNYDLMKELNDGKQMKDVWTGGLTAKSEKWAGKHPTQKPEYLLERIILASTK
                     ENDYILDPFVGSGTTGVVAKRLGRRFIGIDAERDYLKIAKTRLEKESGKK"
     gene            25441..26307
                     /locus_tag="U1041_000424"
     CDS             25441..26307
                     /locus_tag="U1041_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction endonuclease"
                     /protein_id="HEM4767554.1"
                     /translation="MEKNRDFEKWLSTMTDTIADWTYYTDFPKVYDNVESIKVPLNIM
                     NSLIGSKNIQQDFLDLYQNYPEVLKVIPILIAKRLKDTIIVKDPIKDFYFDFCKPNYS
                     IEEYAMFLEKSGIFDLLEKHIISNLVDYVTGVEVGMDTNGRKNRTGHAMENIVQNYLE
                     AAGYVLGESLFKEIYQNEIEELFSVDLSAITNEGNAAKRFDFVIKHNSTIYLIEVNFY
                     SSGGSKLNETARSYKMIAEEAKTIPNVEFMWFTDGQGWHKAKKNLQETFEVLPHLYNT
                     NDLKNDILKTLK"
     gene            26581..27642
                     /locus_tag="U1041_000425"
     CDS             26581..27642
                     /locus_tag="U1041_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM4767555.1"
                     /translation="MQARVEKFEAKLAQSTVDGILVTGQNNIYYLTGFWGTEATVFIS
                     RKRRLFVTDSRYTLIAKASVKGFDIIESRFALEEIAKVIKEDGLEKIGFDSQVTYGFY
                     QSLTSIFEGYQLVAMSNFIEDLRMIKDEKEIATIRRACQISDQAFIDVLDFIKPGQTT
                     EMDVNHFLDHRMRQLGAEGASFEFIVASGYRSAMPHGRASEKLIQTGETLTLDFGCYY
                     QHYVSDMTRTIHIGHVTDQEREIYDVVLRANKALIEQAKEGVTYREFDAIPREIINAA
                     GYGANFTHGIGHGIGLDIHEYPYFGKSDEPIKAGMVLTDEPGIYLDDKYGVRIEDDLL
                     ITETGCEVLTLAPKELIVI"
     gene            27706..28263
                     /gene="efp"
                     /locus_tag="U1041_000426"
     CDS             27706..28263
                     /gene="efp"
                     /locus_tag="U1041_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEM4767556.1"
                     /translation="MIEASKLRAGMTFEAEGKLIKVLDASHHKPGKGNTIMRMKLRDV
                     RTGSTFDTTYRPDEKFEQAIIETVPAQYLYQMDDTAFFMNTETYDQYEIPVATIKEEL
                     LYILENSDVKIQFYGTEVIGVTVPTTVELVVAETQPSIKGATVTGSGKPATMETGLVV
                     NVPDFIEAGQKLVINTAEGTYVSRA"
     gene            28291..28683
                     /locus_tag="U1041_000427"
     CDS             28291..28683
                     /locus_tag="U1041_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM4767557.1"
                     /translation="MTTEYQGEIVIAPRVLEVITGIAAAKVDGVHSLQNKRVADSWSK
                     TSLNKGVYLETDEEGRVTADIYVYLEYGVNVPAVSMDIQRAVKTAVYNYAEVQVVAVN
                     IHVSGIVPDKTPKPALKDLFGEDFLDEE"
     gene            28673..29092
                     /gene="nusB"
                     /locus_tag="U1041_000428"
     CDS             28673..29092
                     /gene="nusB"
                     /locus_tag="U1041_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEM4767558.1"
                     /translation="MKNNRHALRKCALQAIVSLEFGQEPVQAAQFSYLYDREEEQDGV
                     EIPLFLLNLVNGVADYRDDLDKELSSRLKAGWTLDRLTLIDKNIMRLGLFEILHFEET
                     PDRVAVNEAIELAKEFSDESSAKFINGVLSQFIKEEA"
     gene            complement(29172..30137)
                     /locus_tag="U1041_000429"
     CDS             complement(29172..30137)
                     /locus_tag="U1041_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4767559.1"
                     /translation="MVAKLTDVAQLAGVSPTTVSRVINKKGYLSEKTIRNVEEAMREL
                     GYKPNNLARSLQGKSAKLVGLIFPTINNIFYSELISHLEKELFDRGYKTIICNSQHES
                     DKEREYLEMLAANQVDGIISGSHNLGIQDYDRVVAPIIAFDRNLSPSIPIVSSDNFAG
                     GVLAAQTLQKAGCHNPLMITGNDDSNSPTGLRQVGFTSILNKAEVFHISSDFSPVRKE
                     MEIRAILEKQKPDGIFVSGDATAMLVWNVIRSLKLSIPEDIKLIGYDGTSFIENYYPQ
                     LTTIKQPLTEIARLLVELLVDKIEGKKLTKTDYILPISLLAGASI"
     gene            complement(30118..31572)
                     /locus_tag="U1041_000430"
     CDS             complement(30118..31572)
                     /locus_tag="U1041_000430"
                     /EC_number="3.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000455313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="HEM4767560.1"
                     /translation="MAFTTEERYRAYADWTPEYIEKIKKNTESSPWRTNFHIETPHGL
                     LNDPNGFSYFNGKWTLFYQYFPFGAAHGLKSWVHTESTDLVHFEETGTVMYPDTPLDS
                     HGAYSGSAMEFGDKLFLFYTGNVRDENWVRHPYQIGALMDKDGKIEKIDKVLIEQPGD
                     TTDHFRDPQIFNYKGQYYAIVGGQNLDKKGIVKLYKAENNDYLNWSYIGDLDFANDMT
                     AYMMECPNIAFVGEQPILLYCPQGLDKEVLDYDNIYPNMYKIGQSFNPETASIVEPSE
                     LINLDYGFECYATQAFNAPDGRTLSVSWLALPDVEYPTDAYDYQGCLSLVKELTIKDG
                     KLYQYPVDAITSLRKEAQPFSAQKETNNVYELELDFSAGTKHEIVLFANEEEKGLVLS
                     VDTEQGQITLDRGNCGQPFALDFGTSRSCEISPGALTANIFIDKSVFEIFINKGEKVF
                     SGRVFPDADQSGIVITTGNPTGTYYHLDYGRKTN"
     gene            31779..33668
                     /locus_tag="U1041_000431"
     CDS             31779..33668
                     /locus_tag="U1041_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM4767561.1"
                     /translation="MNNTEIAKKVIDALGGRENVRSVAHCATRLRVMVVDEGKIDKDT
                     VEDIEKVQGAFFNSGQYQIIFGTGTVNKIYDEVVALGLPTATTGEQKAEAAKQGNAFQ
                     RAIRTFGDVFVPIIPAIVATGLFMGLRGLFAALEMPLTGDLNTYSQILTDTAFIVLPA
                     LVVWSTFRVFGGNQTIGIVLGMMLIAGQLPNAWVVASGGDVKPLMFFGFIPVVGLQGS
                     VLPAFIIGLIGAKFEKAVRKVVPEVLDLLVTPFITLFVMSILGLFVIGPVFHVVENYI
                     LAATQAILNLPMGLGGLLIGGVHQVIVVSGVHHIFNFLEAQLVANTGANPFNAIITAA
                     MTAQGAATVAVGVKTKNPKLKALAFPAALSAFLGITEPAIFGVNLRFRKPFLLSLIAG
                     AIGGAFASILGLAGNGMGVTIIPGATLYVGNGQLFQYILMVVVSFALGFALTYLFGYE
                     DEEKEVKKPSASTQETAETLKEAETGLVAEETLVSPLSGDVVALENVNDPVFSSGAMG
                     KGLAVKPSEGVVYAPADAEVTIAFETGHAYGLKTASGAELLIHIGIDTVSMNGNGFEK
                     LVAAGDKVKAGTPIAKFDAAKIAEAGLDDTTMIIVTNTADFAEVSPLAEGTITHGVEF
                     LKVAK"
BASE COUNT        10186 a         6388 c         7523 g         9605 t
ORIGIN      
        1 gtgaaaggaa tataatgatg acaaataaat attggaagtg tgattgctat gttaattgtt
       61 ccactttttt taaggtttaa cctttttaaa ccaccaagat aatcgttttt tctagttgtt
      121 tgtaagtgta tcgtatcttg gaaaagaggt ttattatgga atctatagtt ggaataattg
      181 ttattgtagt tgttatggct gttctggttt atttattgat taatatgtgg aaaatcagag
      241 cgacttcagc tggtcagacg gatgacacta cgctatactt tgtaagattt aagggggtaa
      301 atccgccaga tttagcaaat agtagtgttt ttaatcaagt agccaaaatc aaatgtgcta
      361 aaggagatac ctatcaagtc acttcaacag tcaatgatgt gaaactgaga gacgtgatta
      421 tggatgagtt tcagctcaaa tcttctgagg ttgtagttta ctatcctcct cgtcttttct
      481 tttatgcatc atagtggcaa ctcttcggag ttgctatttt tttgtttctg gagagtagcg
      541 gaaaagcggt ttattttagt agcgaaattt ccgtagtggt aaggaaatac ttcctacgga
      601 aaatgtaagc gtgttcatgt aaaataaaat cataacaaaa gtaaataata aaatagttgg
      661 aggaaaatcc tatggtaaaa gctttgatta tctgtgcagg aggcatgtct tcttcactta
      721 ttgcaaaaaa aacacaaact cttttggaag aacaagggca tacagtagaa atgaatgctg
      781 tcggtgttcc agaaggtggt aaaaaaataa atgcggcaga gtatgacttg tacttgatta
      841 gcccgcagac aaaaatgcat tttaagcaat ttgaagaagc aggtaagaag gtagggaagc
      901 cagttgtcca aattccacct caagcctata ttccaattcc gatgggaatt gaaaaaatgg
      961 ctaaattggt cttggataat atctagttct ttgctatcat agatggtata ttgatttgaa
     1021 aagaggctag ttatgctaaa tactaaggaa aaaatgatat tacagtatct ttatcagcac
     1081 cagaatggtt tttcaaccag taaagtattg gcagagcatc tttcttatac ggatcgtacc
     1141 atccgaacct atatcaaaaa attaatttcc gaaatatccg aggaagaaac aggttttgcg
     1201 attttatcca aacaaggtta tggctatcag cttcgaatta gcgatgagga aaaataccat
     1261 cgtttcttat ctgaaaacca actagtattt ggggtggatt atagtgatgc agaaaatcgc
     1321 cataaacaaa tcctgaataa attgatattt gaagaagaat gtatcttatt tgatgatttg
     1381 gcggaccagc tgtttgtcag tagatcaacc ttgtctcatg atttcaagca cattagggag
     1441 catcttgctt cttatggttt gagcatcgag agcaagccct ataagggagt ctatgtggtt
     1501 ggtgaagaac gtcaaaaacg tcacttcatt atggactatt tctttagtga acatttttat
     1561 cagaatatcc atcatttttt atccaatgat aaaagtctag ccttacctct atcttttgaa
     1621 gagctaacaa ttgtagtctt agatgagtgt cgtgatagtc agttgaagct atctgattat
     1681 attatccaaa atttagttat tcatttaggt ttggctatcc aacgctatca aaaaggtttt
     1741 acaatttctc ctgtcaccat cgataaggaa aagtatgctg aagaattggc agtagctaca
     1801 aagattgcta ggcgattatc ccatcgattg gaacctcaga ataggttccc tgaggaagaa
     1861 gtggtctaca ttgctctaca tttgatttca aaaacacaat tggaggtgga gaagtcatcg
     1921 gaccgccact tgttgcgcca agcacttttt gaagttttag ggcgttatga tgatgaatat
     1981 ggttatcaat tttcacatga tttttccttg atagaaggtt tgctaacaca tctggaggtt
     2041 ctcgtagaac gactccgtca caatctccat attgataacc ccctacttga tgatattaaa
     2101 acaacttatc atgatatctt cgatttgaca caatcactaa tggctgaact ttcagttttt
     2161 cactcttata gcttgtccga gtcagaaatt gcctatgtag ctctacactt gatggcttcc
     2221 ttggaacggc aaaaagaaaa atacaaacta aatgttctgg ttatctgtgc aacaggatac
     2281 ggtagtgctc agatgctgaa aaataggatt aaaaatgaac ttgggcaaca ggtgtccata
     2341 tcagatgtca tcggttacta tgatttagat aatcaaaagt tgcaggggat agatgtgata
     2401 atgtcaacca tcgacttatc tggtttggtg tttaaggtcc ctgttataac tgtcagtgtc
     2461 tttttaacgg atcaggaagt taaggaagtt aaacaacgat tggcggactt gagacctagt
     2521 ctccaaaaac cacaggtagt ggaaagagag agtaacttgg agaaatactt tgatcagtac
     2581 ttctcagaac aacgattttt agttgttgag tcagctgaaa aagaaatgtt attaaagcaa
     2641 atgatttcac agttggagag cgaaggtctt ggaaatcacc aggaatttta taaattaatt
     2701 gaggcgcgtg aaagcttgag tacattggta tttgataaag atatagctgt tcctcacccc
     2761 ctaaaaccca ttagcgaaaa gcacatgatt tctgttgcgg ttataaaaaa tggtctatat
     2821 tgggaagaag actatgggca gattagattg gttttcttag tgagtccatc tatatataca
     2881 aatgaaggtc tatcaaccat taccaatcga ttggtagatt tggtagattt accagaagtc
     2941 aagaaagaca taataaactc tcctgatttt gaaacattca aacacgtttt tttacaaaga
     3001 gaatagaagg tgacatatga atacagaaga attacaaatg gctgcatttg ggatcatcct
     3061 cagtagtggc aatgcaagaa gtgttatcca cgaagctttt gctgctatga gagaaggtga
     3121 ttatgataag gcagaagagt tattggaagc agccaatgct gacatgcttg aagcccacca
     3181 ttctcaaacg ggtctcttac aggaatacgc aagcggtact gaagtgaagg tagagattat
     3241 tatggttcat gcgcaagatc atttgatgac aacaatgact ttacgtgagg tagcgcttga
     3301 aatgttagct ttgtatcgta aagttggtta gaaagaggat atgggatgag taagggaatg
     3361 gcaagtaaaa agctacagaa aacaccagaa caattaaaac aagagtctaa acgcaaaagt
     3421 cagctcttta atcgctatat gctgtttcgt tatagtttag cagtgttctt ctttgcaaat
     3481 ctatactggc ttctggttca attatttcaa ccaagtttgt atctaatcct gccctcgctt
     3541 atgctgattg caataatcat tgcgacggca gaacaattta agttgtatag tgccgaggag
     3601 tctcgattga caaagacaga atttgtatta aaggcacaag caatcttgca agggttaatt
     3661 gtggttttag tgattttggg tcatatctca accctctttc caactttttc aaaccataca
     3721 tctgctaaac tctttgttat tggcttgcag ttgttaggtc ttgctttagt tgttctcaat
     3781 ataaaaaggt tggagcaggt aaagcaaaat accgataaat actacctacg ttttcaaata
     3841 ataagaaaat atctttaaaa ttttaggagg tcttctcatg gaagaacaaa aagggttctt
     3901 tggactatta gataaatatc tgatgggacc aatgggtaaa ctggcatctt acaaagttgt
     3961 acgtgccatc acagctgcag gtatggctgc cgtaccattt acgattgttg gttcgatgtt
     4021 cttggttttc agtatcttac cacaggcatt ttcattctgg ccaatcgttt cagatatttt
     4081 tgcggcatct tttgataaat ttaccccact ctatatggtt gccaataccg ctactatggg
     4141 ggtgctatcg ctttattttg cacttgctat tggatatgaa ttgacaaaaa tttacgctga
     4201 ggaagaagaa cttaatttga ctccgcttaa tggggcgctc ttatccctct ttgctttcat
     4261 catgaccgtt cctcaaatta tttttgaaga aggcgcgatg tcggcagtca gctctcttga
     4321 agaaggcgca ataattgttg atggttgggc aatgggtggt ggcgtaacac gctttggtac
     4381 aacgggtata tttacggcaa tcatcatggc tgttgcggca gttctgctat atcggatgtg
     4441 cgtgaaaaat aattgggtta tcaaaatgcc cgattcagta ccagagggtg tatcacgcgg
     4501 atttacagct ttgattcctt catttgtcgt agccttcttt gtaattttct tgaacggtgt
     4561 attggttgcg cttggtactg atatatttaa agttattgca attccattta gctttgttgg
     4621 aaatttaaca aatacttgga ttggtttagt tattatctac ttgttgactc aggcactttg
     4681 ggtagtaggt attcacggtg caaatatcat ctttgctttt gttagtccaa ttgcacttgc
     4741 aaatatgtct cttaatgcag ctggtgaacg aatgattgtt gcaggtgaat tttcaaacat
     4801 gttcgtcatt gcaggtggtt ctggtgcaac acttggacta tgtatttggt tagctactcg
     4861 tgctcgttct gaacaattga gtgcgattgg aaaagcagca attgttccgg gtattttcaa
     4921 catcaatgaa ccactgattt ttggtttgcc aatcatctat aatccagcac ttgcaatccc
     4981 attcatgctt gcaccaattg catctatgac agtgtattac ttctctatga agttgaatct
     5041 tatcaatgca gttgttgctc aagtaccatg gccaactcca gttggtatcg gtgccttcct
     5101 tggtacagct gactggcgtg caattgttgt ttcaattgtt tgtgcagttg ttgccttcct
     5161 tgtttactat ccattcattc gtgcatacga taaacagttg ctaaaagaag aagcggcaaa
     5221 tgcttaaact agagaaactc cttgacttct tctaagtcca aggagttttt ctataagaga
     5281 atatcaggag acattgttag ctaaacataa gatagtatca tatttgcttc cttctttcta
     5341 aatcagagga gctgaggtag ggcaagagaa gaagattttt tatagctgac ttgatgaagc
     5401 gactatcaat acacatggag gcttaaaaat atctctacta cttttgctaa tactaatcga
     5461 gagaaaacct ctcccttgtt ccaagtttta attgggatat tatctaatgt tttaagaata
     5521 gtgataattg gaaatagcat agaatagtat cagtttggca tattatcacg taggaatgaa
     5581 gggagttctt ttgctattat atagctaata aagtcagaag gagaattgtg ctatgacaaa
     5641 acaatttcca aaaggatttc tttggggcgg tgcgacagcg gccaaccaat atgaaggtgg
     5701 ttggaatttg ggaggtcgtg gtccagccac ttccgatacc tatatagcgg tcgatccaga
     5761 taagcggaag gatatgagtc actttggtaa gcctgtttcg cgggctgatg tggaatttgc
     5821 cttggcagat caagaagggc tctacccaaa acgttggggt tctgatttct atcatcgcta
     5881 caaggaagac atcgccctct ttgcagaaat gggcttcaag accttccgct tgtcgattgc
     5941 ctggtctcgt atttttccaa aaggagacga gttagaaccg aatgaagaag ggctggcctt
     6001 ttatgatgcg gtcttcgatg agctgaataa atatggtatc gagccattgg tgaccctatc
     6061 ccactatgaa tttcctcttc atcttgctct ggaatacggc ggctggaaaa accgtaaggt
     6121 catagagttc tttgttcgct atgccgagac agtattcaaa cgctatcagg gtaaagttaa
     6181 gtattggctg acttttaatg agatcaatat tttgggcatg gttggttatc tatcaggcgg
     6241 tcttctcttt gaagacggaa agaatgacct agaagccatg taccaagcag ttcaccatca
     6301 gtttatcgct tctagtttgg caacaaaagc tgcccatgag attgacccag aaaacaaggt
     6361 tggttgcatg ctggcacgga tggagaacta tgcagctacc tgcaatccag acgatgtctt
     6421 ggcggccttg aaaaaagacc aggaaaatct cttctataca gatgtgcagg tgcgtggagc
     6481 ctaccctagt tatatgaaac gcttcttcaa agaaaacaat atccatgtcg tgttcgagcc
     6541 gggagacgaa gcgattttga aacaatatcc tgttgatttc atgagttttt cttactatat
     6601 gacatctatc acacgtgctc ttccagacaa ggacaaggca acggcaggta atttgatatt
     6661 aggagaggcc aatccttatc tggaagcgtc ggactgggga tggcagattg accctgtcgg
     6721 acttcgtatc accctcaaca agctttatga ccgttaccaa gttcccctct tcattgtgga
     6781 aaatggtttg ggagccttgg ataaggtgga ggaagatggc agtattgagg acagctaccg
     6841 tattgcctac ctagaaaaac acatccagca aatgtatgaa gccattgaag atggtgtgga
     6901 gctcatgggc tacacccctt ggggctgtat cgatctggtt tctgcttcta ccagcgaaat
     6961 gtccaaacgc tatggcttta tctatgtgga tgcggacgat caaggcaacg gcagttttga
     7021 ccgttcacgg aaggcatcat tctactggta taaagaagtc attgccagca atggagccaa
     7081 tgtattgaca gaaaaatagg aggtcttatg acaaaaacga tttatctcat gcgtcatggt
     7141 gaaaccctct ttaatacgca aaaacgagtg cagggttggt cggattctcc cttgacagaa
     7201 cgtggtatcg tccaagccca atccgttggt cagtatttta aggagcaggg aatcgtcttc
     7261 accagtgcct attcttccac gcaagagagg gctactgata cactaaaatt agttacggat
     7321 gctccctacc aacagctcaa ggggctcaag gagatgaact tcgggatttt tgaagccaga
     7381 gaggaagaat tacttcccaa gcctcgtcct ggagctcgtt ctttcgaaga cctcttggag
     7441 ccatttggag gcgaggacat tcgagcagtt ggaagtcgtg tcaaagaggc gattctctct
     7501 gtcgcggaaa gcgatccagc tgatccaatc ctcatggtca gtcatggtgc agccatttgg
     7561 ggattggtgc aggttttgga ggtcaccttc ccaccaggca tcttcctgcc caactgtgcc
     7621 atttgccagc tgactgttga aaatggggaa ataagatttg aaaaactgat tgattccgca
     7681 catgatttta aggtttatga ctttaagtag ggaggtttag tatgaactat ctttacttga
     7741 tgcgacatgg acagacacgg ttcaacctcc aaggtcggat tcaaggggcc tgtgattctc
     7801 ccctgacaga tttgggaaaa gagcaagcac tagctgctca ccagtatttt caagagcaag
     7861 ggattgagtt cgataaaatc tattcttcaa cccaagaacg tgcctgtgac acagctgaat
     7921 tggttacagg gaggatggac tatattcgct tgaaaggctt gaaagaacag gattttggag
     7981 ctttcgaggg tcaacaggaa tacctcaatc ctcccttaca gggagacatt ggctacggtg
     8041 attattttgt cacctttgga ggagaatctt atcaagatgt ccggcaacga atggtcgaaa
     8101 ctattggtgg catcatggaa gaagcggaca atcaatccgt tttagtagtt agccatgggg
     8161 ctgccattgc ccaatttttc agacaggtat tgacagattt tccgcgagta cggatgcgga
     8221 attgtgccat actgactttt acttatgaag acggccacta cgatttgcaa agcattgtgg
     8281 atcccgttaa taaagaaact ctctatcaaa aagaaggaaa ggaaaaggag aaaaaatgac
     8341 agtaacaaaa gtatttccaa aaggattttt atggggtggt gcaacagcag ccaaccaatg
     8401 tgaaggagct tacgatgtag acggacgtgg tcttgccaac gtcgatgttg tgccgattgg
     8461 cgaagaccga gcttccatta tcactggtcg taagaagatg tttgactttg aggacggtta
     8521 tttctatcca gccaaggagt ctattgatat gtatcatcac ttcaaggagg atattgctct
     8581 ctttggtgaa atgggcttta agacataccg tctttcaatc gcctggtccc gtattttccc
     8641 taagggagat gaattggagc ctaatgaaaa aggcctgcaa ttctacgagg acttgtttaa
     8701 ggaatgccac aagtatggta ttgagccctt agtgaccatc acccactttg actgcccaat
     8761 gcacttgatt gagacctacg gcggctggag aaatcgcaag atgcttgaat tttacgaacg
     8821 cctttgccgt accctcttca cacgctacaa gggattggtc aaatactggc tgaccttcaa
     8881 cgaaatcaac atgattctcc acgcaccatt tatgggggca ggtatctgtt tcgaagaagg
     8941 tgaaaatgag gagcaagtca aataccaagc tgcccaccac gagcttgttg cttctgccat
     9001 tgctactaaa ttagcccatg aaatcgatcc ggaaaacaag gtcggttgta tgttggctgc
     9061 aggtcaatac tacccacaca cctgccaccc acgtgatgta tgggaagctc tgcaagaaga
     9121 tcgtgagaac tatttcttta tcgatgttca ggcacgtggc tattatccaa actatgccaa
     9181 gaagaagtgg gagcgtgcag gtatcgagat tgaaatgaca gaccaagacc tagcactctt
     9241 gaaagagcac accgttgact tcatttcctt ctcctactac tctagccgtg tggcctctgg
     9301 agatccagta gagaaggaaa aaacagcagg caatatcttt gcttccatta aaaatcctta
     9361 cctagacgca tcagaatggg gctggcagat tgacccactc ggtttccgca ttaccatcaa
     9421 ttccatatgg gatcgctatc aaaaaccact ctttgtggtt gaaaatggtc tgggagcagt
     9481 cgacacgcca gatgaaaacg gctatgtgga agacgactac cgtatcgact atctccgcca
     9541 acatgtccta gctatgcgtg acgccattgt cgaagacggt gttgaacttc taggttacac
     9601 cacttggggc tgtattgacc tggtgtctgc tggaacgggc gaaatgaaaa aacgctacgg
     9661 cttcatctat gttgaccgtg acaatgaagg aaagggaacc ctcaaacgtt ccaagaaaaa
     9721 atcatttgac tggtataaaa aagtcattgc aacaaatgga gcagatgtgg aataaagtag
     9781 aaagacaagt cttgtggctt gtcttttgtt atcgtttcca ctataataaa aattagttaa
     9841 caataaagga gttttgcatg aaatatatcg taaacaacag caatgaccca gcctacaaca
     9901 ttgccctaga agcctatgca ttcaaggaat taacagatat tgacgaaatt tttattctct
     9961 ggatcaatga acctgccatc attatcggta agcatcagaa tgccattgaa gaaatcaaca
    10021 aggaattcac agacgaaaag ggcatccatg ttgttcgccg tctgtcaggt ggtggcgctg
    10081 tctatcatga cctcaataac ctaaactaca ccattatttc aaacaaggca gacgagggag
    10141 cctttgactt caaaaccttc tccaagcctg tcattgatac ccttgccaca ctaggtgtag
    10201 aggctaattt caccggccgc aatgacctgg aaatcgacgg aaagaaaatc tgtggtaacg
    10261 ctcaagcata tgcaaaaggt cgcatgatgc accacggatg tttgctattt gatgtggata
    10321 tgtcagtcct cgcaagtgcc ctcaaggtca gcaaggacaa gattgagtct aaaggtgtca
    10381 agtcagtccg tgcccgtgtg accaatatca acaacgagtt gccagagaag atgacagtct
    10441 tggagttcaa ggacgccatc ctcaaccaga tgaagcaaga atacccagac atggacgagt
    10501 atgtcttgtc agaagatgac ttggcccgta tccaagaaat ccgtgacacc cagtttgcga
    10561 catgggactg gacctacggt caaacaccag aatacactgt ggagcgcagc gtgcgttacc
    10621 cagctggtaa aatcacaacc tacatcaagg ctgagaaatc agttatcgag tccatcaaga
    10681 tttacggaga cttcttcgga attggtgatg tatcggatat cgaagacttg ttggtcggta
    10741 ctcgctacga gtatgcggat gttcttgcca aattgcaaga aatcgacacc acgcactatt
    10801 tctcacgcat gacaacagaa gaagtagcaa aagcgattgt agcttaatcc atagggctgc
    10861 cctttgtttg ggcagtcatt attttttgtg aaaatgtttt cggcaaactg ttttcacttg
    10921 cacattttct atattatggt ataattattt tctgtgagta tccctcactt actcgtggct
    10981 agaccatgag tcattagacc aaaaggagga acatatcaat ggctaaatac gaaattcttt
    11041 atattattcg tccaaacatt gaagaagaag ctaaaaacgc tttggtagca cgctttgact
    11101 ctatcttgac tgacaacggt gcaactatcg ttgaatcaaa agcatgggaa aaacgtcgcc
    11161 ttgcatacga aatcaaagat ttccgcgaag gtttgtacca catcgttaac gttgaagcta
    11221 acaacgatga agctcttaaa gagtttgacc gtttgtcaaa aatcaacggc gacattcttc
    11281 gtcacatgat tgtcaaactt gacgcgtaag aaggtgttgt atgattaata atgtagtatt
    11341 ggttggtcgt atgacccgtg atgcagaact tcgttatact ccgtctaatc aagctgttgc
    11401 gacttttact ttggcggtta accgcaattt taaaaatcaa aacggtgagc gtgaagcgga
    11461 ctttatcaac gtagtcattt ggcgtcaaca agctgagaat ttggcgaatt gggctaagaa
    11521 aggtgctctg attggtgtta caggtcgtat ccagacacgt agctatgaca atcagcaagg
    11581 gcaacgtgtc tacgttactg aggtagttgc agaaagtttc caactcttgg aaagccgtac
    11641 tgcccgtgaa ggtcaaggtg gaggctattc agctggcaac tcgtttgctg gaggaaatga
    11701 ctataactcg ccttatcaag cgcctgcaca atctacacca aacttcgctc gagaagaaag
    11761 tccatttgga gcaagtaatc caatggatat atcagacgat gacctaccat tctaggtcaa
    11821 aaattaataa tataaaggag aacacacatg gctcaacaac gtcgtggcgg tttcaaacgc
    11881 cgtaaaaaag ttgactatat cgcagctaac aaaattgaat atgttgatta caaagatact
    11941 gagcttctta gccgtttcat ttctgaacgt ggaaaaattc ttccacgccg tgtaactgga
    12001 acttcagcta aaaaccaacg taaagtaaca acagctatca aacgtgctcg cgtaatggca
    12061 ttgctaccat tcgtaaacga agattaaaaa aatgacccca acgggtcatt ttttcttgcg
    12121 ctctagaaat gcgaaaagcg caataacagt atggactgtt ttttcacgag catgaaaata
    12181 agaaagcgag taatggtcca gtggaccatt tttgcatgaa ctcgaaatta agaaagcgaa
    12241 ttaagccctt gaatggacta tttcaacccg agccaagaag ttagaaagcg aggcacagtc
    12301 tggggataga ctgtttcagt cacttacgca gatgtgtaaa actcccaggt gaactgtata
    12361 gataaacaaa agcgactgga atattccaat cgctttgttt tattattgaa ctggggacat
    12421 ggcattgcga atgttatatt tctttttcaa gaggtagcgt gcaccgaaag cagcagctcc
    12481 gataagaata gtaacaagcg gagggagaac tgggttaaaa gcggccggaa tcagtgctgc
    12541 cagaatgaaa acgactgacc aagccagagt agcaagtccg agaaaagcga tagctttcag
    12601 caatttagga cgttgcccag ttttaatttg ttctctgtaa acaaagtgat acataaagta
    12661 cataccagcg ccgacaccaa aaccaatgac taatagtgtg agcaagccat attgggcacc
    12721 ttgtcccaat aagttcatca atccattgat accagcaata attgcaagca tgaaaagact
    12781 agaatcgagc cacatcaacc atggattttc attgtattcc acttggtctt tcttttcctg
    12841 ttcagaaatt gtcttactag cagcccactc actgggtgct ccatagagat tgcgggcagt
    12901 cacgccagtt ttttgctttt caatgatagt tggtaaaatt tcttccaaga gttctttgat
    12961 ttcactatca gactttccat ctttaatcag ttggttggtc gcaatatgga taaattcttg
    13021 gttctttttt gttaatccgt tgatttctgt aaatgacatg ttaatctcct taggttaaaa
    13081 ccatctctta cggatgaagt agaaggtgag tgataggctg attgcaaagg cgaaaagaat
    13141 aatccaccaa aatgcatatg gaacgtcatt aaatggaatg atattatctt taaagttcat
    13201 tccgtatgca gagaagacca tggttgggat agagagaacg attgtcacta atgccaaggt
    13261 tttcatgatg gtgttttggt tgttagaaat gatagaagca aaggcatggg tcatagagtt
    13321 caggatggaa ccatagatgt ctgccatctc aatggcctgt tgggtttcga ccaaggtatc
    13381 ttcaagcaaa tcctcatcct cttcatactt acggagtaga cgtgaggaac tagcaagttt
    13441 tttgaccaaa cgttcattgg ttttgaggga agccttgaag tagacgatgg ttttttccaa
    13501 ttccatgagt acaattaatt cttcatttcg agtggcctca tggagttgct tctcaatctc
    13561 ttcgctcttt ctgtcaatgg tccgtagggc tgacaagtag agttgagcat tgcggtagag
    13621 aatttggaaa acgaaacgag acttcatgaa agtgaagaaa ttccgtagac gacgatggat
    13681 aaactgctca aacagtggca atggttccaa acaagtcgtg ataatcgcat catctgttag
    13741 aataattccc aaaggaatag taatataata tgtcttgttg tttcgttctt caagaattgg
    13801 gacgtcgacc aggatgagcg tatagtcatc ttcgacggtg atacgagagg attcttccgc
    13861 atcgagtggt gctcgcaggt cagcgatgtc aattttatag tgctcagcca cttccataga
    13921 ctcgctctgg gaggggttga ccaaattaat ccaagcccct ggttcaaagg tttgaatttc
    13981 ttctaaatca gtcatggttg atagaaaaat ttgtttcata tctttgccct ccttttatct
    14041 ttgttgcgtt aacgcaacct ctattatacc aaaaaatgtg cagtttcgga aaggttttat
    14101 atagaaatgt gatataatat gtagacattt aagcgaataa gttgtacgga tttttccttg
    14161 ttccgtatac catagcttat agcctcttaa gaaaggaaat gaacacgccc taaacgctgt
    14221 gtgaaaaatt gctggtttct tcatgtttaa gcatgtggaa ctggcttctg cgtcgtagac
    14281 atctgtactt tcttcggttt tcaacctgtg aaagcactag ttgtcttgac gggggtgcgt
    14341 cttcgaaatc acagatttcg gacttaccgc ctattttcac cttacgtttt acgggctctg
    14401 tatctttaga aaggaattga acacgggcta aatgcagtgt caaaaagata aacttccttg
    14461 tgtctttcag acacatcgtc agtttcctat tttgactgtg catttgacgc cctttgtatc
    14521 ttagaaagga ttcgaatgcg tgctaaaagc gtcgagaaaa agacaaaatg ttttgtcacg
    14581 aagtgacgtc acattttcct attttcttct cgctttctta acgcacttat atcatgttat
    14641 gcaagaaaat attgtgattc atggggcgcg tgcccataat ttaaaaaata ttgatgtgac
    14701 cattccgcgt gagaagctgg tggtggtgac tgggttgtcg gggtctggta agtcgagttt
    14761 ggcttttgat actctgtatg ccgaaggcca acggcgctac gtagagtcct tgtctgccta
    14821 tgctcgtcag ttcttgggca acatggacaa gccagatgtg gattccatag agggtctcag
    14881 ccctgctatt tccatcgacc aaaaaacgac gtcgcggaat ccgcgttcga cagtcggtac
    14941 agcgacggaa atcaatgatt atctccgttt gctctatgct cgagttgggg tgccttactg
    15001 tatcaatggc cacggagcga ttgcggcttc ttcggtggaa caaatcgttg atgaggtctt
    15061 ggaattgcca gagcgccagc gtttgcagat tctagctccg attgttcgga agaaaaaggg
    15121 gcaacacaag actatttttg agaaaatcca gaaggacggc tacgttcggg tgcgggtcaa
    15181 tggtgatgtc tatgatgtat cggaagtacc agaattgtcc aagagcaagg ctcacaacat
    15241 tgaggtcgtg gtcgatcgga ttgtcatcaa agagggcatt cgttcgcggc tttttgactc
    15301 cattgaggcg gccctgcgga ttgcggacgg ctatgtcatc atcgacacca tggacgagaa
    15361 ggaaatgctt ttctctgagt actatgcctg cccagtttgt ggttttacgg taccagagtt
    15421 ggagcctcgt cttttctctt tcaatgcgcc ttttgggtct tgtagcgatt gtgacggttt
    15481 ggggatgaag ctggaagtgg atacggattt gattgtccca gatgccagca agaccttgcg
    15541 tgagggtgcc ttggctcctt ggaatccaat ctcatccaac tactatcctc agatgttgga
    15601 gcaggccatg aaccactttg gtgtggacat ggataagcct tttgaggaat tgacggaaga
    15661 ggagaagaac ctgattttca acggctcgga cggcaaagaa tttcatttcc attatgaaaa
    15721 tgaattcggt ggggtgcgtg atattgacat tccatttgaa ggtttgatta ccaacattaa
    15781 ccgtcgctac cgtgaaacca atagtgacta tacgcggacg gttatgaaga cttacatgaa
    15841 tgagctgacc tgtggaactt gccacggcta tcgcctcaat gaccaagccc tgtctgtcaa
    15901 agttggtggc gaaaagggac tgcatatcgg acaattatca gacttgtccg tggcggatca
    15961 tttgcaagtc attgaacatc tgaccttgtc tgaaaatgaa gcgacgattg cgacgcccat
    16021 tgtcaaggaa atcaaggatc gcctgtcctt ccttaataat gtgggtctta actacctgac
    16081 cctttcacga gcagcgggga cgctttctgg tggtgaaagc cagcggattc gtctggcgac
    16141 tcagattggc tctaacctgt ctggtgttct ttacatcttg gatgagccat cgattggtct
    16201 gcaccagcgg gacaatgacc gcctgattgc tagtcttaag aaaatgcggg acttgggtaa
    16261 tactttgatt gtagtggagc atgatgagga caccatgcgt gaggcggact ggttgattga
    16321 cattggtcca ggtgcgggtg tgtttggcgg agaaatcgtg gcctctggaa cgcctgccca
    16381 agtagctaaa aataaaaaat ccattacagg ccagtacctg tctggcaaac gtgaaattcc
    16441 tgtacctcta gaccgtcgtg ttggaaatgg tcgattctta gaggtgaccg gtgccaagga
    16501 aaacaacctg caagatgtga ctgttcgttt cccactcgga aaatttgtgg cggtgacagg
    16561 ggtgtctggc tctggtaagt caaccctggt caattccatt ctgaaaaaag ctattgctca
    16621 gaaactcaat cgcaattcgg acaagccagg caagttcaaa tccatttcag gaattgaaca
    16681 cttggaccgc ctgattgaca ttgaccaaag cccgattgga cgaacaccgc gttccaaccc
    16741 agctacctac acaggtgtct ttgacgatat tcgtgacctc tttgcccaga ctaatgaagc
    16801 caaaatccgt ggctacaaga aaggacggtt ctcctttaac gtcaaaggtg gacggtgtga
    16861 ggcttgttct ggtgatggta tcatcaagat tgaaatgcac ttcctgccag atgtctttgt
    16921 accttgtgaa gtctgtcatg gacaccgtta caattctgaa accttggaag tacattacaa
    16981 ggagaaaaat atcgcccaag tccttgatat gacagtcaat gatgcggtcg aattcttcaa
    17041 gcatattcca aaaattgagc ggaaacttcg caccattcaa gatgtgggct tgggctacgt
    17101 tactctaggt cagccagcaa cgaccctatc aggaggggaa gcccagcgga tgaagttggc
    17161 ttcggaactc cacaagcggt caactggtaa atccttgtat atcttggacg aaccaacgac
    17221 aggtctgcat acggaggaca ttgcccagtt gctcaaggtc ttggctcgct ttgttgatga
    17281 tggcaatacc gtgctggtca tcgagcacaa tctggatgtt atcaagacag ccgaccacat
    17341 tatcgacatg gggccagaag gcggtgtagg tggcggtacc gttgtcgcga caggaacgcc
    17401 agaagaagtg gcggataacc cagccagctt tacaggacaa tatttgaaaa tgaagttgaa
    17461 ataagcaagt aaaaaagagc catcggctct tttttactgt tctttatcca tattattcaa
    17521 ggcatagtca caagcctgaa tgacaaagct tgagaaactg acatcttttt tgacgattgc
    17581 ttcctcaatt ctatctacca actctgacgg aaatcgaata gttttgattt ctgtttcttt
    17641 tttatctgat tttaatttaa atgccattta tttgctcctt gttacaagtg tatagcgaaa
    17701 taaatgaata tgaaatatta cagattgtat tactaaatgt attgcaaaaa taaaaattgt
    17761 atagtaaaat attttggaag actatttcat aaaagggaga attatatggt ttatagtaga
    17821 actcagcgca tccaagaaga aaagaagcag cgtttacgat atgggattcg taaatttaca
    17881 ggcttaggag ccgcatctgc tctattagga gtaggtttac taacaagttt atcggttcat
    17941 gcacagacta agacggcaga ggttcgttat gattatgtaa cgactgagga attgactgag
    18001 gcagagaaaa aggcgatttt tacagagctt ccagctcagg tgacagaaga tgtgaactac
    18061 tatcttgtgt atagaaaagt agggtcttca attttgccac agacaggaga aagcacaggt
    18121 gtattagctg gagctattgg ggcaggcttg ctactggttg gtgtaactgt tggtcggaaa
    18181 aatcaacgga tggttcgctc agcaatgacc ttgaccttgg taggaggaag tctagtcttt
    18241 acttctgtat ctgccgtgac ggttgcccag ctggctcagt atggtcaagc tcaaaccttg
    18301 acagtagggg cggcactccc agatggaaag atttcaattg caggttatga gtttgtaggt
    18361 tatttggaag ggaaaaagca gagcagtgat acaagtccaa ctctacctac tggttcaata
    18421 gataaggcag aagaaaatga gaatctactt gtccaaccaa cccaaccagc agatgagaac
    18481 aaatcagaca tcccaacaga atcaattccg tcagaggaca aggtaacaga cagcccagca
    18541 gaatcaactc cgtcagagga taaggtaaca gacgcttcgg cagaacagaa accatctgaa
    18601 gacaaggttg aagaagttcc agcagaaagt aagccagcgg agaaacctgt tgaagaaaca
    18661 ggaggtggtc aggttatcgg tacagaagac aaggttattt cagaaacgga gaaaccagtc
    18721 caaccagaaa tacctgcgcc agtggaaaaa ccagctgtac caggggaaac ggaaacgact
    18781 gttacacctg gagaagagaa acctgttagt ccagaacttc caactaatcc agcagaacca
    18841 gatcgacctg ttgatacagt tcgaacagat gtagagaaac aggtaacggt catcaagtat
    18901 ggaactagct atgtgaaaga tacaagtttg ccagctggag aaagcaaggt tcttacacaa
    18961 ggtgtggatg gaaagcaaac agtcaccacc aaagtgactt ataccaataa tgtagagacc
    19021 gctcgtgaga tcgttgcgac tgaaacaatt gaacctgtta cagaagtaat cgcctataat
    19081 gatgaggttt ctaaaaatct agaagagctt atagaaagct tggcgactat ttcatttgct
    19141 acagagcgtc gtgccaatgc ggatctggaa gtaggctccg aacgtgtact ggtcgcagga
    19201 gttaatggac aaaccaagac ccttacaaag aaagtctatg attctacagg tgcagtcatt
    19261 agtgaagaag tggtcagcac ggaagttatt gctcaaccag ttacgcaagt cattgaatac
    19321 ggtactaagc caaagtctgt tgttgaaaca acagaggaaa ccaaggtaac agagcttgac
    19381 tacactgttg aaactcgtca aaatccagac ttagaaaaag gtcaaactcg tacacttaca
    19441 aaaggaagaa agggaacact aacccaaacc taccgcatta ctaagacaaa cggtaatgaa
    19501 acggcgcgcg aactagtaaa agaagaacgt gtcgaaccgg taaatgagat tattgaagtc
    19561 ggtacaaagg ctgttgttcg ttaccaaact cgccaagaaa caagtgtcat tccatttact
    19621 acagaaactc gtcaggtgga tagcttattt gaaggtgaaa gtcgtgagtt ggtagcagga
    19681 gtggacggtc agcaaataca gacctataag gatacctatg tggacggcgt caaggttgcc
    19741 tctgaaatgg tgggtcaacc agaggttatt cagccaatta agcgtatagt agaagttggt
    19801 atcaagaaag aagagacgag tcaagttctg acagaaacgg aggtgcttgc ctatacttca
    19861 atcaaagaag aagatccgaa tctcccagaa ggtgaaacaa aaatcaaagt tcagggagta
    19921 aacggggagc gtaaggtccg tatcacacgg gtcaccaata accgtactgg tcaagtaagc
    19981 gaaacccgcg aggtcatctc tgagactgca ccagtcaatg aggtccttgt ggtcggcact
    20041 aaacctgcca gcactagcct actcgacaag aagacgctaa cgctggatga gttcatgagc
    20101 ctcaccgagg agcagcagga cgccttcatc gctaagaaag gaaccgtgcc tggcacgacc
    20161 atccgaactg gcgcaaccaa ggacaccctt gagaaggtgg agcagcttat caacctcgac
    20221 aagctcaacg ctgagttcgt cagcctgctt aacgcagccc gtgcggcaga aggcctatcg
    20281 gctgtaacat acgcaggtca gggctcagac gctcaaaacg cggcgactgc ccgtgccaac
    20341 gaaatggcgg accacggtag tcttcgctat caaggtaccg ccgacggcgc tcacaagcgc
    20401 ccagacggct ctaagtggac caccatctac acggcagagc agactgctcg acaaggctgg
    20461 cgtggtgaaa acgcactcca gatgggctca tcactcagcg catacagcgc catcaacgag
    20521 agccgcatcg ccaacaacct cttcactgag tggatgaact ccgctggcca caaggccgtc
    20581 atgatgaaaa acctggacaa cctccaggtg gcagtcggca tcggactcaa cgacaaggct
    20641 atcgagacca ccttcaacca gggtgtgacc gtggccatgc tggaattggt tgagccaaaa
    20701 ccgtagagga actgagaaaa attgtcgaaa ttgcatggat ggtattatac tataggagaa
    20761 catatgaaaa agaatttttt aaaattgttg gtggcaatat caacgttaag tctagtagct
    20821 tgtggtcaga cggatcagac tggtcaagtg aaccaagaaa cctctagtag tacacaaaag
    20881 gtgacggaaa gttcaagtac aacgaagagt gagaaagtag tcagcagccc agatgatttt
    20941 cctcgtgtag atgaacatac tgaaattgat gctgaagcaa agcaagctgt aaaagactat
    21001 gtaggatttt attcaggaat agttgacatt ccgtcagctg aaacaagtca tgctcccgat
    21061 gataatttga ccgtatttta taagattgat tttgcaatca acgaagatgg tagctatgaa
    21121 ttgtatctag agcgagatgt tcctggaagt caaatagggc atttgtatgt cacaaaagac
    21181 aatcaaatga atgctaaact aaaggttggg gaacttcatc aaggtaagtt cgaactagaa
    21241 tatggacaac tgttgctttc agaaggtcct agcctaactc aaggttttct tggagaagat
    21301 ggagacttac tgccaatgta tggcttttat ggcagtgata caccaacaaa ctatcttggt
    21361 gtaacagata atgatgaaat tgttgtaaaa gacggtaaag tacaggctac cttttactta
    21421 tctgcttatg ccgataaagc aactgtcatt gaccttgaaa aacaaacaac aagaccagca
    21481 tcattgaagt acagtacaga acagattagc caatattcag cggaacatta caaagaattg
    21541 gggatggcat ctgaagtgac ctatcagtac aatacagtaa atgagtttct acaggcactc
    21601 agattgcgtc atacgactca gaaaaaaacg ttagaaaaaa taaaagttgt tgatggtagt
    21661 agtctgactg gctattatac ttctgataat aaggaaatta aaaatatcaa gtttgcgata
    21721 ttcgatggga tatctaactc ttactatgtt tatacgggag ataaggttta tcaactcgaa
    21781 aatgaacatg aagccaaaga aataaaagtt atacctgaac tcattgatta cattagttac
    21841 tctgtaggtt aaaaggagag taggatgaaa aaattattac cccttatttt aacgagcgtc
    21901 accgtatttt tcttagttgc ttgcggagct aaaaatgata acgggaccta tacctattca
    21961 agggaaaaag acggcactac ttatacagta attatcaaaa ttgaaaataa tactgggacc
    22021 cttacgtttg aagaaaaagg ggaagatggt caaactcaat ctgaggaaca gggactgact
    22081 gttgatcaag aaagaaaaac gctaacagca gaaaatgata attcgaccgt ggattatgaa
    22141 attgttgatg gggtcctaac gttagacact cttgattcaa ctttagcaaa tgcagagttt
    22201 accaaagaat aaacgtaaat actctgttcc atttgtcaga aaagtcgctc tagcggcttt
    22261 tttgtctgat tttttctacg cttgataagc tagtacaaat cagatataat ataaaaaata
    22321 agttacttaa caaggagacc tccatgcaat cggaatacgt tttattgtgc agtccataca
    22381 gatacagttc agtttttgcc aattcagtca atagacaatt tatcgaaaaa gaactaatga
    22441 gtgtcgtcat gccaggtgtc aatataatga ccagaggcct gttgcgaacc atgttagaaa
    22501 caaactatgg aattacagat tattcaagtt taaaagaaga aattgataaa ctggaagatg
    22561 gtcgttatca tgctttagaa gatgtttcgt catttattga tggaatagcc aatcctgatg
    22621 taaaagactt ttacttttct ttaaattcat taacaggttc tcaactaatc aaaggctttg
    22681 acgactgccg tataattgat gtcttgacga aatcgtatgc tactcgcttg attactaaag
    22741 aagaatttga ggaactgttt accaagcaaa cagagcgtat caaaaatagt tatcagactt
    22801 gggaacaata cctagcatct tgtgtaatgg gaaaattact tcagtatgtt cctagctcag
    22861 aaacgattac aagcgttgag gaatatgtgg tagatgttta ttctttttgt attgcaccga
    22921 cgaatgtctt ttcttatggt actttttggg caaatcatga gttagccaac ttgacagctt
    22981 tgttagaaaa cttcttacct gaagaaattg ttaaagagtt aaaatcaagg caagatcgtg
    23041 tggattataa gggtgagatt ccgggactta ctgcgccttc aaatgatttg cttgcttccc
    23101 tagaaggaac ctctatagac ccaactttta tcgattatga acgctatcag tacctgagcg
    23161 aacttgcaga ttacgttttt tggactcccc ttattgagaa taatcttgaa tggatgattg
    23221 cagaaaaaaa cttgcaagaa caagatacaa ttcttttacc aaaggagtat gcaagtcttt
    23281 attcggctag agtattttgg tatcattatc caagctacaa ggagttgcat gaagaacata
    23341 tttttgccat gtttgaagga actctaagtt taaatcttat ctttacagag gaagctgtct
    23401 acacctttaa gaagaaatta ttcggcaaac cagcacttgt cagaatccct tgggaacaag
    23461 ttgagttaag ctcctcactt aatttatgga tggaagaaag taaaattcat tttggcaaaa
    23521 agacaatctc taatgtcagt ccagttttaa gcgaaatcgg cctaaatagt aaggctattg
    23581 acgacctaga ttctcaagaa aggaaagctc ttgaaaatga atggcaacaa aaaatgaatc
    23641 aatttttaga gggtattcct caacggattc gtgaatttaa agggaaatga gaaacaactc
    23701 ttaatgctgt tttgaaaagt cgcttaggcg gcttttttgc atgttggagg ctattccact
    23761 tcaattaatc aaacatattt agagatatgg tataatataa acgatgatac aattacaacg
    23821 aactcaacca actttacaac cttttacaaa atggactggt gggaagcgac aactgcttcc
    23881 ggttataaaa tctcttatgc cagacaatta taatagttac tttgaaccat tcattggtgg
    23941 tggggcggta tttttcgaac tcattccgaa aaaagcaatt atcaatgatt tcaatagtga
    24001 gcttatcaac tgttatcgtc aaataaaaga taatccccaa aaactcattg aactactagt
    24061 cgagcatcaa aaaaacaact ctaaagatta ttatttagaa ctacgctctg ttgatagaga
    24121 tgacagaatc catgccatga ccgacaccga acgtgctgca cgtattatgt atatgttgcg
    24181 agtgaatttt aatggcttgt atcgtgttaa ttctaaaaat cagttcaatg taccttatgg
    24241 tcgctataaa aatcctaaga ttgttgatag tgagttaatt ttatctattt ctcaatatct
    24301 aaataaaaat aatattgaga ttttgacggg ggatttcgaa aaagctgttg aagatgtagg
    24361 tgctggagat tttgtttatt ttgacccacc gtatatacct ctttcagaaa caagtgcctt
    24421 tacatcttat actcatgaag gtttttccta tgaagaccaa gttagattac gagatgtttt
    24481 cagaaaacta gataaaaagg gtgcctatgt aatgctatcc aattcatcta gtccgttagt
    24541 agaagaattg tataaaggtt ttaatattca taaggtagaa gccattagga ctaatggggc
    24601 gaaagcatca agtcgaggaa aaatatcaga aattatcgta actaattatg acaaataacg
    24661 aatataagta tggaggggtt attatgacga aaccatacta tcataaagaa aattccatac
    24721 ttgttcatgc ggacactttt gagtttttgt caaaaatgaa acctgaaagt atggatatga
    24781 tttttgcgga tccgccgtac tttttgagta atggcggaat atctaattca ggtggtcaag
    24841 ttgtatcagt tgataaaggt gagtgggata aagtttcctc acttgaagaa aagcacaact
    24901 ttaatcgacg ctggattcag ttagctaaaa aagttttgaa acccaatggg acgatttgga
    24961 tctcaggtag tttccacaat atttattcag ttggaatggc tttagaacaa gaaggtttca
    25021 aaattctgaa taatattaca tggcagaaaa cgaatcctgc acccaattta tcctgtcgtt
    25081 actttacgca ttcaaccgaa acaattcttt gggcaagaaa aaactataag aaggctcgtc
    25141 actattataa ctatgatttg atgaaagagt taaacgatgg aaaacagatg aaagatgtct
    25201 ggactggtgg attaacagca aaatcagaga aatgggctgg aaagcatcca acccaaaaac
    25261 cagaatatct tttagagcga ataatattag ctagcacaaa agaaaatgac tacattctag
    25321 atccttttgt tggtagcgga acgacaggag ttgtagcgaa gcgattaggt cggagattta
    25381 ttggaataga tgccgaacga gattacttaa aaatagcgaa aacgagattg gagaaagaaa
    25441 gtggaaaaaa atagagactt tgaaaaatgg ttgtctacca tgacagacac tatagcggat
    25501 tggacttatt atacagattt tccaaaagtc tatgataatg tggaaagtat aaaagttcct
    25561 cttaatatta tgaatagtct tattggtagc aaaaatatac aacaagattt tttagatttg
    25621 taccaaaatt atccagaagt tttgaaagtt ataccaatcc ttattgcgaa acgtttgaaa
    25681 gatacaatta ttgttaaaga ccctataaaa gatttttatt ttgacttttg taagccaaac
    25741 tatagtattg aagaatatgc tatgtttttg gaaaagtcag ggatttttga tttactcgag
    25801 aagcatatta tatcaaatct agtggactac gttacaggag tcgaagtcgg catggatact
    25861 aacggtagga agaaccgtac tggacatgct atggaaaata ttgtgcaaaa ttatctagaa
    25921 gcggcgggtt atgttttagg tgaaagccta ttcaaggaaa tctatcaaaa tgagattgag
    25981 gaactcttct ccgttgattt atccgccatc actaatgagg ggaatgcagc caaacgattt
    26041 gactttgtta tcaagcataa ttcaactatt tatttgatcg aggttaattt ttactcaagc
    26101 ggtggttcaa aattaaatga aacagcacgt tcatataaga tgattgcaga agaagcgaag
    26161 acaattccta atgtagaatt tatgtggttt actgacggac aaggctggca taaagctaag
    26221 aaaaatttac aagaaacttt tgaggttttg cctcacttgt ataatactaa cgatttaaaa
    26281 aatgatattt taaagacttt aaaatagttt aggcaatgat taaattttcc ctaaaaatta
    26341 gccgaaggct ctagtgtaga cgtatccgat aaaatgcgta tgttctttat gggaaatgct
    26401 ctcgtaactg aaatcgtacg aaaaattgga gagtatataa aagtattgga ttagtgaaag
    26461 attccatttc tctgtgacat acttaaaaca gtcgctctag cggctttttt gtctgctgat
    26521 aataattggt atttgtctgt atttctgcta taatagttac aaaatctttg gaggtagctt
    26581 atgcaagcgc gtgtggaaaa attcgaagca aaattagctc aatcaactgt tgatggaatt
    26641 ttggtaacgg gacagaacaa tatttactac ctaactggtt tttgggggac agaggcgact
    26701 gtcttcatca gtcgcaagcg tcgcttgttt gtgactgatt cgcgttatac cttgatagcc
    26761 aaggcatcag taaaaggttt tgatattatc gagagccgtt ttgcccttga agagattgca
    26821 aaggtgataa aggaagatgg acttgaaaaa attggttttg atagccaggt gacctatggt
    26881 ttctatcaaa gtctgaccag tatttttgag ggctatcaac tggttgctat gtcaaacttt
    26941 atcgaagact tgcgcatgat taaggatgag aaagaaattg cgaccattcg ccgtgcttgt
    27001 cagatttcag accaggcttt tattgatgtt cttgacttta tcaaaccagg tcagacgact
    27061 gagatggacg tcaatcattt cctagatcac cgcatgcgtc aactcggtgc cgaaggggcg
    27121 tcatttgagt ttatcgtggc atcaggctac cgctctgcta tgccccatgg aagagcctca
    27181 gaaaagctta tccagactgg tgaaacgctg accttggact ttggctgcta ctaccagcat
    27241 tatgtcagcg atatgacgcg taccattcat atcggacatg tgacagatca agagcgtgag
    27301 atttacgatg tggtcttgcg tgccaataag gctttgattg agcaggccaa ggaaggtgtc
    27361 acctaccgcg agtttgacgc tattcctcgt gagattatca atgcggcggg ttacggagcc
    27421 aactttacac acggcatcgg tcacggtatc ggcttggata ttcatgagta tccatatttt
    27481 ggaaaatctg acgagccaat caaggctggt atggtcttga cggatgagcc tggtatttat
    27541 ttggatgata agtatggtgt ccgtattgaa gatgacctct tgattacgga aacaggttgt
    27601 gaagtcttga cattagctcc caaggaattg attgtcattt gagaaatttg acagtttgtg
    27661 gtagaataaa gcgaataaat aaaatttgaa gaggtattca atacaatgat tgaagcaagt
    27721 aaacttagag caggtatgac cttcgaagct gaaggtaaat tgattaaagt tttggatgca
    27781 agccaccaca aaccaggtaa aggaaacacc atcatgcgta tgaaattgcg tgatgtacgt
    27841 acaggttcaa ccttcgatac aacttaccgt ccagatgaaa aatttgaaca agcgatcatc
    27901 gaaacagttc cagcacagta cctttaccaa atggatgata cagctttctt catgaatact
    27961 gaaacttacg accagtatga aattccagta gcgactatca aagaagaatt gctctatatc
    28021 ttggagaatt ccgatgtgaa gatccagttc tacggaacag aagtgatcgg tgttactgta
    28081 ccaacaactg ttgaattggt cgttgcagaa acacaaccat ctatcaaagg tgcgactgtt
    28141 acaggttcag gtaaaccagc tacgatggaa acaggtcttg tagtcaacgt accagacttt
    28201 atcgaagcag gtcaaaaact cgttatcaac acagcagagg gaacttacgt atcacgtgct
    28261 taatcgtttc ctcttaagaa aggagagcct atgacaacag aatatcaagg cgagattgtt
    28321 atcgcacctc gcgttcttga agtaattaca ggcattgctg cagcgaaagt tgatggagtg
    28381 cattcccttc aaaataagcg tgtagcagac agttggtcaa aaacatcgtt aaataaaggt
    28441 gtttatcttg aaactgacga ggaaggtcga gtgactgcgg atatttacgt ctatctagaa
    28501 tatggtgtaa atgttcctgc tgtatcaatg gacatccagc gtgcagtcaa gacagcagtt
    28561 tacaactatg cagaagttca agtggttgcg gttaatatcc atgtcagcgg cattgttcct
    28621 gataaaacac caaaaccagc attgaaagat ttattcggag aggatttcct tgatgaagaa
    28681 taatagacat gccctgcgta agtgtgcttt gcaggcaatc gtatcacttg aatttggtca
    28741 agaacctgtt caggcagctc agttttctta tctttatgat agagaggaag agcaagatgg
    28801 agttgaaatt ccgctctttc tccttaacct tgtcaatggt gtagcagact atcgtgatga
    28861 cttggataag gagttatcta gccgattaaa agcaggatgg accttagacc gtttaacctt
    28921 gattgacaag aatatcatgc gactaggcct atttgaaatc ttacatttcg aagaaacgcc
    28981 agaccgtgtt gctgtcaacg aggctattga attggctaaa gaattttctg atgaatcttc
    29041 agctaagttt atcaatggag ttttgagcca gtttattaaa gaagaagcct gatgagcttc
    29101 ttttttactt gagaaataag agaatgtatc acaaaaaagc tgcacctaat ttttattagg
    29161 tacagctttt tttatatact agctcctgct agtaggctaa tcggcaggat atagtctgtt
    29221 tttgtcagtt tttttccttc gattttatca actaatagtt caaccagcag gcgagctatt
    29281 tcggttaatg gttgcttgat ggttgtcagt tgaggatagt agttttcgat gaaactggtt
    29341 ccatcataac caatcaattt aatatcctct ggaatagata gtttcaatga acgaatgacg
    29401 ttccatacca gcatagccgt tgcatcgcca gatacaaaga taccatctgg tttttgcttt
    29461 tcaagaatag cccggatttc catctccttg cgcacaggtg agaaatcact ggagatatga
    29521 aaaacttcag ctttgttcaa aatagatgtg aaacctactt ggcgaaggcc ggtaggtgaa
    29581 ttggaatcat cgttccccgt aatcattaat ggattgtgac atcccgcttt ttgtaaggtt
    29641 tgggcagcta ataccccgcc agcaaaatta tcggaagaga caatgggaat ggaaggagag
    29701 aggttgcggt caaaagcgat aattggagct acgacacggt cgtagtcttg gataccgaga
    29761 ttgtgactgc ccgagataat cccatctact tggttagctg ctaacatttc tagatattca
    29821 cgttccttat cggactcgtg ctggctattg caaataatgg ttttatagcc tcgatcaaaa
    29881 agctcttttt ctaaatggct aatcaattca gaataaaaaa tattgtttat tgttgggaag
    29941 atgagaccaa ctaattttgc agatttacct tgcaaactac gagctaaatt attaggtttg
    30001 tagcccagtt cacgcatagc ctcttcgaca ttgcgaatgg ttttttcaga taggtatcct
    30061 tttttattga taacgcgcga gacagttgtt gggctgaccc cagctaactg tgcgacatca
    30121 gttagttttg cgaccataat ctaaatggta gtaggttccg gtcggattac cagtcgtaat
    30181 gacgatacca gactgatccg catcagggaa gacacgacca gaaaatactt tctctccttt
    30241 attgataaag atttcaaaga cagatttgtc gatgaagata ttggctgtaa gagctcctgg
    30301 agaaatctcg caagagcgac ttgtgccgaa atcgagtgcg aatggctgac cacagttgcc
    30361 acggtccaat gtaatctggc cttgttcagt gtctacagac aagactaagc ctttttcttc
    30421 ttcatttgcg aacaatacga tttcgtgctt cgtgcccgct gaaaaatcaa gttccaattc
    30481 gtaaacatta ttggtttctt tttgggctga aaatggctga gcttctttac gaagactggt
    30541 aatcgcatcg actggatatt ggtagagctt accgtccttg atggttaatt ctttaaccaa
    30601 tgacagacag ccttggtagt cataagcatc ggttgggtat tccacatctg gaagtgccaa
    30661 ccagctaaca gatagagttc gaccgtctgg tgcattaaag gcctgggttg catagcactc
    30721 aaaaccatag tccagattga tcaattcgct cggttcgaca atgcttgctg tttcaggatt
    30781 gaaactctga ccaatcttgt acatgtttgg atagatattg tcatagtcca atacctcttt
    30841 gtctaagcct tgtggacagt agaggagaat tggttgttcg ccaacgaacg caatattcgg
    30901 gcattccatc atataagcgg tcatatcatt ggcaaaatct aggtcaccaa tataggacca
    30961 gttgaggtag tcgttatttt cagctttata aagtttgaca attccctttt tatccagatt
    31021 ttgtccaccg acgatagcgt aatattgccc tttatagttg aaaatttgtg gatcacggaa
    31081 atggtcggtg gtatctcctg gttgctcaat caagacttta tcaatctttt caatcttacc
    31141 atctttatcc atcaaggcac cgatttggta tggatggcga acccaatttt catcgcggac
    31201 atttccagta tagaagagga agagcttgtc gccaaattcc atggcagatc cagagtaggc
    31261 accgtggcta tcaagtggtg tatctgggta cataaccgta ccagtttctt caaaatggac
    31321 caaatccgtt gattctgtat ggacccaaga ttttaatccg tgcgcagcac cgaatgggaa
    31381 gtattggtaa aaaagagtcc attttccatt aaaataagaa aatccatttg gatcatttaa
    31441 tagtccatgt ggtgtttcaa tatggaaatt tgtcctccaa ggagaactct ctgtattctt
    31501 ctttattttt tcaatatatt cgggtgtcca gtcagcataa gctctgtaac gctcctctgt
    31561 tgtaaatgcc ataattttct ccaaattttc tagtttttca ttaatatagt aaacgttttc
    31621 ttgaaaaaaa tcaagtttta acaatgtttt taagaaattc aaaaaaaaat gtgataaacg
    31681 tttgacatat tttataaaag tgatataata aaaccatcga aagtttgaaa acactttcaa
    31741 aaaagcaaaa aaatatttaa taaggagatt tttgcaagat gaataataca gaaattgcaa
    31801 aaaaagtcat tgatgccctt ggcggacgtg agaacgtacg cagtgttgcc cactgtgcga
    31861 ctcgccttcg tgtcatggtt gttgatgaag gaaaaatcga caaggataca gtcgaagaca
    31921 tcgaaaaagt acaaggtgct ttcttcaact ctggtcaata ccaaatcatc tttggtactg
    31981 gtacagtaaa caaaatctac gatgaagtgg ttgcccttgg tttgccaaca gcgactactg
    32041 gtgaacaaaa agctgaagct gctaaacaag gtaatgcttt ccaacgtgcg atccgtactt
    32101 tcggtgacgt attcgttcca atcattcctg ctatcgtagc aacaggtctt ttcatgggcc
    32161 ttcgtggctt gtttgccgct cttgaaatgc ccttgacggg ggatttgaac acttactcac
    32221 aaatcctaac agatacagcc ttcatcgtat tgccagcctt ggtggtatgg tcaaccttcc
    32281 gcgtatttgg tggtaaccaa accatcggta tcgttcttgg tatgatgttg attgcaggtc
    32341 aattgccaaa cgcttgggtc gttgcatcag gtggtgatgt gaagccattg atgttcttcg
    32401 gcttcatccc agtcgttggt ctgcaaggtt ctgtcttgcc agcattcatc atcggtttga
    32461 ttggtgctaa attcgagaaa gctgttcgca aggttgttcc agaagttcta gatcttttgg
    32521 taactccatt cattacctta tttgtaatgt caatccttgg cttgtttgtc atcggtccag
    32581 tcttccacgt ggttgaaaac tacatcttgg ctgcaacaca agctatcttg aacttgccaa
    32641 tgggtctagg tggtctcctt atcggtggtg ttcaccaagt tatcgtcgta tcaggtgttc
    32701 accatatctt caacttcttg gaagctcaat tggtagctaa cacaggagct aacccattca
    32761 acgctattat cactgcagct atgacagcac aaggtgcggc cactgtagcg gttggtgtga
    32821 aaactaagaa ccctaaattg aaagctcttg ctttccctgc agctctatct gctttccttg
    32881 gtattactga gccagctatc ttcggtgtta acttgcgttt ccgtaagcca ttccttcttt
    32941 cattgattgc aggtgcaatc ggtggtgcct ttgcctcaat ccttggactt gctggtaacg
    33001 gtatgggtgt aaccatcatt cctggtgcga cactttatgt tggtaacggt caattgttcc
    33061 aatacatcct tatggtagta gtatcatttg ctcttggttt tgctcttact tacctcttcg
    33121 gttatgaaga tgaggagaaa gaagtaaaaa agcctagtgc ttcaacacaa gaaacagctg
    33181 aaacgcttaa agaagcagaa acaggacttg tagctgaaga aactcttgtt tctccacttt
    33241 caggtgacgt tgttgccctt gaaaatgtta atgacccagt cttctcatca ggagctatgg
    33301 gtaaaggttt ggctgttaaa ccatctgagg gtgttgttta cgctccagca gacgcagaag
    33361 taacaattgc ttttgaaaca ggccatgctt acggattgaa aacagcatct ggtgctgaac
    33421 ttttaattca catcggtatt gatactgtat caatgaacgg taatggattt gaaaaattag
    33481 tagcagcagg tgataaagta aaagctggta ctccgattgc taaattcgat gcagctaaga
    33541 ttgctgaagc aggtcttgat gatacaacca tgattatcgt aacaaacact gctgactttg
    33601 cagaagtatc tccacttgct gagggaacaa tcactcacgg tgtagaattc ttgaaagtag
    33661 ctaagtaatc ttatataaaa tcgatttgta gagtctgcct ct
//
LOCUS       DASFQS010000009        33094 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.009, whole genome shotgun sequence.
ACCESSION   DASFQS010000009 DASFQS010000000
VERSION     DASFQS010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 33094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33094
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.009"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..148)
                     /locus_tag="U1041_000432"
     CDS             complement(<1..148)
                     /locus_tag="U1041_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HEM4767562.1"
                     /translation="MNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSH
                     TTIYR"
     gene            complement(727..1098)
                     /locus_tag="U1041_000433"
     CDS             complement(727..1098)
                     /locus_tag="U1041_000433"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767563.1"
                     /translation="MKRIFSVLFAAVVVLCMLSGCSMKNETYSDEEKQVIKAANQIIS
                     SEYDVTFDEGDFSYSVGKQIKENEFVSLDSEEKQQETFENIVSVSALKTSLHEKGEVY
                     AYSVIFNSQTKEIVSISVNVE"
     gene            complement(1103..3007)
                     /locus_tag="U1041_000434"
     CDS             complement(1103..3007)
                     /locus_tag="U1041_000434"
                     /inference="COORDINATES: protein motif:HMM:NF014717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4767564.1"
                     /translation="MTLFDFARNNISRDRRNYIYYFVNCVFSVFVFFLFTVLSFHPAM
                     SIIDRDSTMGLILIVGELISIGFSVCFISYSVGCFLKARSRQFGLITILGASKKQVNK
                     LVFLENMIVGFASIVTGILLGFVFSKFFLDIANKVIGVSDFTFYFPVQAIITTVIVLG
                     IVFLAIAFFTPRLIRKKEVVRLLKTEVTGEKPQKLLPLLIVFLVLFGFMVWLFTSGTQ
                     MAKQIQDNSVTALVLVFTIITGTYLMFAYGMRMALALSKKSHARGRLLYSSDKKAKLR
                     ANAQTMTISAVLYAISFFSIILLFSISTNVKTETEKIMPYAISYNAWTENADVAGDVA
                     VIEKELQDLPGYQKAVFNLWYNKANPTRSAMMSASDYNIIMKFLGRETVTVSEDGVFL
                     VAGNSGETVKKIPSDIQSFMDENRFDLSVEGYTEATIMLSGFTTNVCIVNDSVFDALK
                     PQMDSKTITAFVYDNWEMNSHSPEAVENSLKTSIENRDANVITAYSYYRTSQLQNNLT
                     LYIGSMLCFTFILAVASFIYSRLYSELDAECKKYKGIVKIGLSKKELSSALRKVTSLI
                     LLVPFLVALIYLWIGIFISERFAIVSNIPVAFWCTVVLLVLQTGIYFGIDASYRKAVF
                     RKVYQDYERS"
     gene            complement(2994..3752)
                     /locus_tag="U1041_000435"
     CDS             complement(2994..3752)
                     /locus_tag="U1041_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003228167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767565.1"
                     /translation="MSILTTKHLGKVYEGKVPYTALNDINFSIEKGEFVAIMGPSGSG
                     KSTLLNVISTIDHPTSGSVCIDSEDPHEMNDDQLAHFRRNTLGFVFQDFNLVHTLTVG
                     ENIMLPLTLEGVPVPEIKKRTAEVAALLGIEPLLSKRTFEISGGQAQRTAVARAVVTN
                     PSLLLADEPTGNLDSKATKDVMELFRMLNETKNATILMVTHDSFVASYCKRVLIIKDG
                     QLYQEIVSDGNRRTFQQEIVDAMSLLGGEPHDLI"
     gene            complement(3860..4879)
                     /locus_tag="U1041_000436"
     CDS             complement(3860..4879)
                     /locus_tag="U1041_000436"
                     /inference="COORDINATES: protein motif:HMM:NF014567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4767566.1"
                     /translation="MKNKKLAKHLKCFVLDHLWVILLFLAAPVSIMIVYLTLISGNPG
                     GTWWYYVFLSLFILLCFLLYRLYSTWDFYEILCNENKTLEDFLISEPKGREEQHYRKL
                     VEEQHRLYLNRLARMEDKQKQSKIMIYRWVHQLKMPLSVIRLVSENKKGDSDFRKIAQ
                     SAAQIQYDLDQVLNMYKLDAIKNDFHSEKVNLHSMCKDCINELKSSFITKGIFPKLEI
                     ADDLVVYSDSKWLRFVLYQLLTNAIKYSDEGKKITVRADRSEECTSLSIQDEGCGIDP
                     RDFNRIFDLFFTGQNGRLRGESSGLGLYMVKQSLDYLGHTIMVQSELGKGSTFTIYFH
                     AKSEI"
     gene            complement(4869..5567)
                     /locus_tag="U1041_000437"
     CDS             complement(4869..5567)
                     /locus_tag="U1041_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002997821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4767567.1"
                     /translation="MDYKIMIIEDDLDIAGLLSDHLQRFGFLVYCCKDLKNVIEEFKL
                     ENPHLVLLDINLPVYNGFYWCNKIRSISPCPIIFLSARNTDPDQVHAIMNGGDDYITK
                     PFSFEVVTAKISAVLRRTYGEYSSFNADELQCEDCIFSKSKLTLSCHGHMTELSKTEA
                     GVIRVMFQNYPNIVSREELLNEIWDDESFVEENTLNVTISRIRKRLERIGSTLAVKTV
                     RGVGYRIGDSRHEK"
     gene            complement(5595..6545)
                     /locus_tag="U1041_000438"
     CDS             complement(5595..6545)
                     /locus_tag="U1041_000438"
                     /inference="COORDINATES: protein motif:HMM:NF014724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM4767568.1"
                     /translation="MIYWIIFGAFTAIFIGSFLREKRAFRNSIFLALSLASLFVAVAY
                     ATNGTIVNTLLNIVLYTVIPLILLFISFVFIYAGVIAIKRERFSLVHSLSIAFGVGIW
                     GAFVAVAVTISAKNLSTITMSMVVLIALIAMYVIFTFSALFIYSQLYHLLPKNKNCDF
                     IIVHGAGLLNGERVSPLLAGRLNKGIEVFESSGRKAKIIVSGGQGSDENISEAEAMKN
                     YLLEKGISEHNIIMEDQSTTTLENMMFSKKIMDQMMSQYRVIFVTNDYHVFRTGTYAK
                     QLFIIGRMRLSESISQLFSNIKQCLSCYFFFGWRVRLFRC"
     gene            complement(6549..6737)
                     /locus_tag="U1041_000439"
     CDS             complement(6549..6737)
                     /locus_tag="U1041_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015529198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4767569.1"
                     /translation="MFEYMTVQDAAKLWGLSDRRVQKLCKENRIKGVVHLNRIWLIPK
                     QTQKPLDQRYKCNWHSEE"
     gene            8466..9221
                     /locus_tag="U1041_000440"
     CDS             8466..9221
                     /locus_tag="U1041_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767570.1"
                     /translation="MVLGNVEKDTEGWIELINQYLQYCIEIGLSPYTQATYKAALAKV
                     LGVSSTNFIATQPRTRANRMNNRVLHTDYRLSNKNNDYWHKVVASTGLRKSELIHVTG
                     DAMQRGRDGRWYLNLDGHKHHTKGRRDRWSPIMATSQEEEEWLVAIFQRAGKKRVFHV
                     PKDLILDDFDGKKVPTALKPHKYRAEYAERVYRSVAREISKIRNRKEVIHLRKELVGI
                     SLDRKACKIVTKALGHNRPEEFPRSYAYILLKR"
     gene            9589..10635
                     /locus_tag="U1041_000441"
     CDS             9589..10635
                     /locus_tag="U1041_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004269878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4767571.1"
                     /translation="MATITKRGNSYRATVSLYKKGQYKRETKTFSNRKDAELWTLEME
                     LEKGRGKNIAERSTLFPDFYRNWVHTVKKNDVREATFINYKRTLVVVDDLFDGIQLKH
                     LDDLVMQKKIDQYAETHSKKTVKELVLKIRGSLKYAYARGLISNDFGHLLKAKGQEQA
                     KRNIPLSITEFKKLRQYCLSHTEDEFNVLVALALETGARRGELLGIKKEDIFEYGIKI
                     LRSISPTNDDTQLKTKHSKRDISINEDVYQAVTKLAQTKEGYIFDWNGFKQAGQLQKL
                     LKQLGLTKTTFHGLRDTHASFLFSKDISLDYISRRLGHNSILTTQQYYLELMPEKKHQ
                     QDADALSLLNDLSL"
     gene            complement(10692..11084)
                     /gene="rpsI"
                     /locus_tag="U1041_000442"
     CDS             complement(10692..11084)
                     /gene="rpsI"
                     /locus_tag="U1041_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEM4767572.1"
                     /translation="MAQAQYTGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADL
                     RLVINQPFAVTSTQGSYDVFVNVNGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAG
                     LLTRDARMVERKKPGLKKARKASQFSKR"
     gene            complement(11104..11550)
                     /gene="rplM"
                     /locus_tag="U1041_000443"
     CDS             complement(11104..11550)
                     /gene="rplM"
                     /locus_tag="U1041_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003083327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEM4767573.1"
                     /translation="MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKP
                     TFTPHTDTGDFVIVINAEKVKLTGKKATDKIYYTHSNHPGGLKSISAGELRSKNAVRL
                     IEKSVKGMLPHNTLGRAQGMKLKVFVGAEHTHAAQQPEVLDISGLI"
     gene            complement(11777..12670)
                     /locus_tag="U1041_000444"
     CDS             complement(11777..12670)
                     /locus_tag="U1041_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HEM4767574.1"
                     /translation="MKRLLSCYASDMVGATKEELKQSILSSEGRIIMGETVVTAAPLI
                     AGVTNAEMMAAFGCDFLVLNELDVFHPEIVGFYDCDNPIAEIKRLTGRLVGINLEPVD
                     SSQEVQDQQVFLKPGRQVSPESLRQAQVLGVDFIMLTGNPATGVSIAAIRSAIGLAKE
                     HFDGLIFAGKMHGAGLGESVVDSQALLDFVDLGADGVLIPAVGTVPGVREEIVAPIVS
                     QVKARGGLVISTIGTSQESADSQTVREFGLSNKRVGSDIHHIGDGGYGRMPDPENILA
                     LSLAVRGKRHTYFKMGQSVRR"
     gene            complement(12736..13596)
                     /locus_tag="U1041_000445"
     CDS             complement(12736..13596)
                     /locus_tag="U1041_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019319849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4767575.1"
                     /translation="MTFTIVTDSTSDLPISWVQENDVTVLGLTINLDGVTYETVGENR
                     LTSAALLEKMASGSQPTTSQVNVGQFEEVFEAAAKEGKEVLYLAFSAALSGTYQSGTI
                     ARDMVLDAYPDVVIEIVDTKAAAIGEGYLVMQAAQARAAGKSLAETKALIEDLVPRLR
                     TYLLVDDLNHLVRGGRLSKSAALIGGLVNIKPLLALNAEGKLEAIAKIRGRKKGIKEM
                     LNLTLDNLDHSTVMVAYTGDIEAAEAIKATLLEDSRVTDVFLTELGPIIATHTGTGVL
                     AILSINKKGR"
     gene            complement(13593..14114)
                     /locus_tag="U1041_000446"
     CDS             complement(13593..14114)
                     /locus_tag="U1041_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEM4767576.1"
                     /translation="MKEKVLIVDGYNMIAFWQSTKQDFKKGDLDAARTTLLRTLSHYA
                     AFEQIEVICVFDAHHVPGLRQQYDEFKVSVIFTEEEETADSYIERLSAQLNSDRRKQV
                     SVATSDLNEQWVVFSQGALRVSARELEERTRVIKKDLDKFVDQVELYTPRLNPWSDGN
                     FQALKEMMEEMKE"
     gene            complement(14115..14843)
                     /gene="rlmB"
                     /locus_tag="U1041_000447"
     CDS             complement(14115..14843)
                     /gene="rlmB"
                     /locus_tag="U1041_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEM4767577.1"
                     /translation="MEHNDIVYGVHAVVESLEANTGNKLYIQDDLRGKNVEKIKALAA
                     EKKVSISWTPKKTLSDMTEGAVHQGFVLRVSEFAYADLSVILEKAEQEDNPLILILDG
                     LTDPHNFGSILRTADATQVAGIIIPKHRAVGVTPVVAKTSTGAVAHVPIARVTNLSQT
                     LDKLKEAGFWVFGTDMNGTPSHKWNTAGKLALIIGNEGKGISSNIKKQVDEMITIPMK
                     GHVQSLNASVAAAVLMYEVFRKKI"
     gene            complement(14929..16104)
                     /locus_tag="U1041_000448"
     CDS             complement(14929..16104)
                     /locus_tag="U1041_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HEM4767578.1"
                     /translation="MNSFEKQQRHNEKIRSMNAQARAMSAQAIALQKQNNILQKEHER
                     QIEKEFKDRIFQLRLHLAQVTDESQRFVIQQMLSEAEEDYENYQREQAEKRLADAKRR
                     KIWLIISSVVAVLGMAGLYFVYQDSSQVTVPELYGIELSEAKDLLYEEGLKVGTITEV
                     GGQSVPPGMVSVSSPSSGKKVKRGSAVNLIIAKNVDAKDTTVVEDSSTSEVATSKTAG
                     SSQASSQSQVGSAVQLFTVDIKKQGLVIRQEPSLSGEVVTNIEPGTYTIVETTQKEGH
                     SWGRLKSGQGWISLTDLHNPVPQVDTKNLTTDQVKAWVMDDLFSRSVMIEKYRKDQVV
                     ISVRMAEDGLVYADVTVPSDPNFEPRDWSYRINSRGELEASEYDTDPEQGGVNWYVV"
     gene            16359..16748
                     /locus_tag="U1041_000449"
     CDS             16359..16748
                     /locus_tag="U1041_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HEM4767579.1"
                     /translation="MTLIFGIVAGLIAFAIGGLWYGLIFRDVWIKASGIDMAKVEADR
                     QAGKNGQKEMVISLVIEVLTAVVAIFFIKTLDVSPLHAAGGMGVIAVLASLKNYVFEQ
                     RPINLILINESYKLVCYLVVGILALFA"
     gene            16818..17786
                     /locus_tag="U1041_000450"
     CDS             16818..17786
                     /locus_tag="U1041_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM4767580.1"
                     /translation="MSLSLRTIKLIFATVLAIYLATALGLSYATAAGIIAILSVLDTR
                     KSSFKMARNRLFSTLLALTIAVLTFALFGFGIWTLGIYLALYVPLAYRFNWEAGIAPS
                     TVLVTHLLLEQDISLIFLGNELALFLIGAGLALLFNLYMPSQEKKIEAYHDQVEDLLK
                     QILLRFEAFLLNGDGRNEAELITQLDKTLDEALKVVYLDRHNQLFQQTNYQVHYFEMR
                     AAQNKILRTMAGNINKCLLEGRENVILSSLFERTAQQLSRENSAKELLLDIELFHATF
                     RERPLPQTREEFETRATLFQLLHDMEAFIRLKVDFYEVYKDQEPSV"
     gene            complement(17783..18001)
                     /locus_tag="U1041_000451"
     CDS             complement(17783..18001)
                     /locus_tag="U1041_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767581.1"
                     /translation="MKKLLRKIRITALYILLYNLILILSIWLGKVSSKEEFMIAVAGN
                     AVMMGLSFVHLHNQVSDEFHGKVEEPSA"
     gene            complement(18143..19273)
                     /gene="ugpC"
                     /locus_tag="U1041_000452"
     CDS             complement(18143..19273)
                     /gene="ugpC"
                     /locus_tag="U1041_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEM4767582.1"
                     /translation="MVQLNLKNIYKKYPNSEHYSVEDFNLDIKDKEFIVFVGPSGCGK
                     STTLRMIAGLEDITEGEAYIDGVLMNDVAPKDRDIAMVFQNYALYPHMTVFDNMAFGL
                     KLRKYSKDEIKKRVEEAAQILGLTEFLERKPADLSGGQRQRVAMGRAIVRDAKVFLMD
                     EPLSNLDAKLRVSMRTEIAKIHRRIGATTIYVTHDQTEAMTLADRIVIMSATKNPAGT
                     GTIGRIEQIGSPEELYNKPVNKFVASFIGSPAMNFFTVTLQEGVLVGDGFKVDLPEGR
                     RKHLEEKGYNGKSFTLGIRPEDIKASQLELDTYPSSIIEAEVVVSELLGAETMLYSKV
                     GSTEFVSRVDARDYHNPGDKVRLTFNLNKAHFFDDETSKAIV"
     gene            complement(19383..20237)
                     /locus_tag="U1041_000453"
     CDS             complement(19383..20237)
                     /locus_tag="U1041_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4767583.1"
                     /translation="MDEKELVSWFPQAKLSQVEGECSLQLGDGSYLDLSDADLTDREG
                     YLLSLLSHPRKQVQSSPWQAYLHDQGRIPQTVEAIQFIHIHLWSQKEAQLDAWQAMMT
                     DLLPSQLAQVQLTPQDYLIVLEQGIWMDHQTVLQDTLSALEFDFGLRLTLFVGQVWPK
                     HVADHWPRLYQAEAQLFAHWRARYQQSAVLSFSQLFLWGQGRAGLEFSLIKASMLELI
                     DQQDMQAIILALWTEGAVVTKAAQVLYIHRNTLQYRLEKWQDLTGLQLKDLTDLSFCY
                     QVLLDRQF"
     gene            complement(20239..20637)
                     /locus_tag="U1041_000454"
     CDS             complement(20239..20637)
                     /locus_tag="U1041_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HEM4767584.1"
                     /translation="MTKAVDVNLINGIALAFEGDAVYSMYIRRHLIFKGLTKPNKLHG
                     EANKYVSAKAQASLISALLEARLLTEKEEEIYKRGRNTNSHTKAKNADVVTYRMSTGF
                     EAVLGYLHMTEQMERLEELVGWCIDKIERG"
     gene            complement(20630..21973)
                     /locus_tag="U1041_000455"
     CDS             complement(20630..21973)
                     /locus_tag="U1041_000455"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002916477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEM4767585.1"
                     /translation="MIKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSV
                     VAFDTIRRYFEYRGYDVTYISNFTDVDDKIIKAANEAGMTTKELSDKFIAAFKEDVAK
                     LGVKPATKNPRVIDYMDEIIDFVQVLIDKRYAYEAAGDVYFRVEKAENYARLANKTLS
                     DLEAGASGRVEGEGQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEI
                     LGDTIDIHGGGADLEFPHHTNEIAQSECRTGQTFANYWMHNAMLNINDEKMSKSLGNF
                     LTAHDMLEQIDGQVLRFFLATQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVD
                     KSGLELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLAVFGIV
                     FEEEVLDSEIEALIEERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTRD"
     gene            complement(22163..22936)
                     /locus_tag="U1041_000456"
     CDS             complement(22163..22936)
                     /locus_tag="U1041_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HEM4767586.1"
                     /translation="MLLEEFENTSAVIEPTDKAIRGGGEVCETMIFSFNGEIVDRVRQ
                     LPESREGGHLQTLNGCHPWYILERDGLQVAVMLAVIGAPMAVGHLEELKACGFENFIV
                     LGSCGVLDKSLAADKIILPSSALRDEGTSYHYAPASEEISYDPASLLTMEKALDQAGI
                     EHVRAKTWTTDAFFRETAAKVKRRLAAGAMVVDMEASAIMAWANFRQAKVYQFFYTAD
                     YVDHHKNEWDARRAERTADSMTFFEVAMAIARTLESRSC"
     gene            complement(22938..23798)
                     /locus_tag="U1041_000457"
     CDS             complement(22938..23798)
                     /locus_tag="U1041_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000613615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767587.1"
                     /translation="MIIATNVLNSQQLSAAKTLISTVQSHDGTYRDPYLSNMLNFDPE
                     MPAFFLAYQGEQLVGLLTVYADDEDVELAILVHPDYRRQGLARKLYDCYQMKTANYPI
                     ASVTFQTERVFLDKHPDLVTVWNLVEDTDTETWLGREREPYQLSQQAELTVSLAQAHH
                     ADDIARFQTQVFDSDYEVALRYAREAIADADSLLYLLEHSGAVIGSCTVDISTDDNYL
                     YGLAIAPDQQQKGYGTYLVKAVINDLIRKNDKPFQIAVEDDNLIAKRLYENIGFTKQT
                     QVVYLDPKGE"
     gene            complement(23854..24471)
                     /gene="cysE"
                     /locus_tag="U1041_000458"
     CDS             complement(23854..24471)
                     /gene="cysE"
                     /locus_tag="U1041_000458"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000539958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEM4767588.1"
                     /translation="MGWWKDTIEIVKEKDPAARTTLEVLLTYPGVKALAAHRLSHWMW
                     KKGFKLLARMHSQFWRFWTNIEIHPGAEIASGVFIDHGAGLVIGETAIIESGVMLYHG
                     VTLGGTGKDTGKRHPTVRKGALVSAHAQVIGPIEIGENAKVGAAAVVLADVPADVTVV
                     GMPAKIVRVHGQKDEKVIHDMEGGREHYTTKLAELREASHHSSHL"
     gene            complement(24525..26759)
                     /gene="pnp"
                     /locus_tag="U1041_000459"
     CDS             complement(24525..26759)
                     /gene="pnp"
                     /locus_tag="U1041_000459"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEM4767589.1"
                     /translation="MSKQVFETVFAGKKLVVETGQVAKQANGAVVVRYGDSTVLTAAV
                     MSKKMATGDFFPLQVNYEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFA
                     EGFRNEVQVINTVLSYDPDASAPMAAMFGSSLALAISDIPFNGPIAGVQVGYVNGELV
                     INPDKAQMEESLLDLTVAGNKDAINMVESGAKELSEDIMLEALLKGHAAIQELLDFQN
                     QIVAAVGKEKADVELLQVDPELQAEIVATYNDDLKKAVQVEEKLAREDATNAVRETVI
                     AAYEEKYAEHEEFDRIMRDVHEILELMEHAEVRRLITEDKVRPDGRRVDEIRPLDAEV
                     DFLPNVHGSGLFTRGQTQALSVLTLAPMGETQIIDGLDDEYKKRFLHHYNFPQYSVGS
                     TGRYGAPGRREIGHGALGERALEQVLPSLEDFPYAIRLVAEVLESNGSSSQASITAGT
                     LALMAGGVPIKAPVAGIAMGLISDGTNYTVLTDIQGLEDHFGDMDFKVAGTRDGITAL
                     QMDIKIDGITPQILEEALAQAKKARFEILDVIEATIPEVRPDLAPTAPKIDTIKIDVD
                     KIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAIFSPDRDAIERTKEIIAGLVREAKV
                     DEVFQAKVVRLEKFGAFVNLFDKTDALVHVSEMAWTRVNKPEDLVEIGDIVDVKVIKI
                     DDKGRIDASMKALLPKPEGYVEPEKRERSDKPRRHKDHDKKEHKEKKDNNFGEFKFHK
                     VEKK"
     gene            complement(27172..28047)
                     /locus_tag="U1041_000460"
     CDS             complement(27172..28047)
                     /locus_tag="U1041_000460"
                     /inference="COORDINATES: protein motif:HMM:NF013540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767590.1"
                     /translation="MKEKIASLIKRTRLEKGFSQKELSEGICAQAVISKIEKAEVSPS
                     VELFFKLVKKLDIDSSMILELFQLKKSTEESILTDELKSILYRREYDTLEYFLQFISK
                     DSVSPIQMPYIQYLNGVLLFGKYKKSNEALEILEGLLPTLVENVNLFLRVGIAIAGIY
                     SELEEYAASLNQYESLIHHYHESNDWELKVLFQYGYSRILYLCNNFEKALVYNAESLE
                     LLKNRNTLFMLGNTLLMRANILAKRSIISEAIDMVKKSIVVYDLEGDELLKNLAQSLL
                     IDLLEQESQDEKEIN"
     gene            complement(28063..29679)
                     /locus_tag="U1041_000461"
     CDS             complement(28063..29679)
                     /locus_tag="U1041_000461"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012235.1,HMM:NF012869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767591.1"
                     /translation="MKLRQVWRILPKFKICLLLLALVGASFDGIIMSQVISRVSQFSS
                     ESTVKDVLLFAGCSILFYLLIQLSDLFVSIIKNDLLKNLHKRYKMELLNYLGNKGNAL
                     DVTESLAVLTVDLKLVEDKYFSVLFDCLYYSLLGAVSLIYLVYLSPAISILFIIFSFL
                     PMLPAILFSKYLGTATENFTKSNEKFIRSIKDIFQGFSVLWTYGANRKFLGMAEIVVN
                     DLENSNEALNNKHSIVNLVSSMLSWLSYIVPITVALVFVTQGKLDASIVIALFLASDR
                     VIYPFRNVSNYLRMIQSTEPTRKKLEKMLQDSQQQEVSENHIDESILKPEIHFSGVAI
                     GHGAAIIKNFNATVPYGRKVLIRGASGSGKTTLLDSIQSVLQPLEGEISVFNHQKKIS
                     NPSNQMARIQQSPYYFEASLKENLLMALESVSKEELLALLLELGLVEELGEDCLEKYY
                     GENGAQLSGGQKQRIEIARALIHNKKILLVDEGTSAIDKQSSALIRKKLANLPITIFE
                     VAHHYSESDLGLYDEIWEIHPNSGTIEKIL"
     gene            complement(30311..30580)
                     /gene="rpsO"
                     /locus_tag="U1041_000462"
     CDS             complement(30311..30580)
                     /gene="rpsO"
                     /locus_tag="U1041_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEM4767592.1"
                     /translation="MAISKEKKNEIMAQYARHEGDTGSVEVQVAVLTWEINHLNDHIK
                     QHKKDHATYRGLMKKIGRRRNLLAYLRRTDVNRYRELIHSLGLRR"
     gene            complement(30783..32060)
                     /locus_tag="U1041_000463"
     CDS             complement(30783..32060)
                     /locus_tag="U1041_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HEM4767593.1"
                     /translation="MSTKANLLFDVHEKPAPLQGILLSFQHVFAMFGATILVPLILGM
                     PVSVALFASGVGTLIYQVATQFKVPVYLGSSFAYISAMALAIKEMGGDVSAAQTGILF
                     VGLIYVLIAALVKVIGTKWIDSLLPPIVIGPMIIVIGLGLANSAVTSAGFVADGDWKN
                     VVVAIATFLIAAFVNTKGKGFAKIVPFLIAIIGGYVIAIFLGLVDFTPVLEAAWFELP
                     GFYLPFETGAFKSYNFYFGPEMIAILPIAVVTIAEHIGDHTVLSQICGRQFLKDPGLS
                     CTLIGDGVATAVSAFIGGPANTTYGENTGVIGMTRIASVSVIRNAALIAIAFSFLGKF
                     TALISTIPSAVLGGMSILLYGVIASNGLKVLIESRVDFGQVRNLIIASSMLVLGLGGA
                     VLNIGAITLSGTALSAIVGIVLNLILPKAEKAE"
     gene            complement(32167..32348)
                     /locus_tag="U1041_000464"
                     /pseudo
     CDS             complement(32167..32348)
                     /locus_tag="U1041_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027822.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(32734..32952)
                     /locus_tag="U1041_000465"
     CDS             complement(32734..32952)
                     /locus_tag="U1041_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767594.1"
                     /translation="MKNIRLKLARVEKDMTQGDLAEAIGVTRQTIGLIEAGKYNPSLS
                     LCLSICHCLGKSLDQLFWEEPTNEKNCD"
BASE COUNT         9600 a         7513 c         6334 g         9647 t
ORIGIN      
        1 aacgataaat cgtcgtatga gaaacgttaa tgccacgatc atataagatt tcttgaactt
       61 cacgatagct aaggttataa cgaagatagt agcccacggc tacaataatc acatcctgct
      121 gaaattgctt tcctttaaaa tgattcatcg tcattcctcc tgctatcttt ttctattatt
      181 ctaccttatt tgatagtaga tttaaaactt tgcaacagaa ccatcttctt tatattggat
      241 tagagattgg cctaatacta acctaggcct catataattt gaagaatcct caaattcgga
      301 aaaatcagaa attttatgtc ccgcctgcaa taaaaacatg ttacgcctat caccaaactt
      361 tcctctaata tatagaatag gtaaactctc attaacagct tttccagtca ccagcaattt
      421 agagttgtta actattgttt aaatttatct tttaataaat cataaagtgt tcgaaaatca
      481 tttggaattg atgatttttt aatactatgt actttcttta tagcatctag aagtttatta
      541 acatcagaaa agtattcttt tacaaagtca cttttttacg gattctaaat ttattttatt
      601 tgcatgtcag gtatccatac gttacaattt ataaaagcta aactcacttt tgagttccga
      661 gcagttgttg tttgctgatt ccgtggccaa agggatggca tcatgaatca ccatatctta
      721 tcactgttac tcaacattca cgctaatact cacaatctcc tttgtctgag agttgaaaat
      781 cacagaatag gcatatactt cgcctttttc atggagactg gttttaagtg cagaaacact
      841 tacaatattt tcaaaagttt cctgctgttt ttcttcggaa tcaagtgata caaattcatt
      901 ttccttgatt tgtttaccta cactatagga aaaatcgcct tcatcaaacg ttacatcgta
      961 ctcgctggaa ataatttgat ttgctgcttt aatcacttgc ttttcctcgt cagaataagt
     1021 ttcatttttc attgaacatc ctgatagcat acataagacc acaactgcgg caaacaatac
     1081 gctaaatatt ctcttcattc ttttaactcc tttcataatc ctgatacact ttacggaaaa
     1141 cagcttttcg ataggaagca tcgatcccaa agtaaattcc cgtctgcaat acaagcagca
     1201 caactgtaca ccagaaagct actggaatat ttgaaacaat cgcaaatcgt tcgctaataa
     1261 aaattccaat ccaaaggtaa atcagagcaa caaggaaagg aaccaacaaa atcaaggatg
     1321 ttaccttacg caatgcagaa gataactctt tcttggacaa cccgattttt acaattcctt
     1381 tgtacttttt gcattctgca tccaactccg aatatagtct ggagtatata aagcttgcaa
     1441 ctgcaagaat aaacgtgaag cacagcatac tgccgatata taacgtcaga ttgttctgca
     1501 gctggctggt gcgatagtag ctgtacgcag ttatcacatt tgcatctctg ttttcaatac
     1561 tggttttcaa tgagttttca accgcttcgg gactatgact attcatttcc cagttatcat
     1621 aaacaaatgc tgtgatagtc ttgctgtcca tctgtggctt caaagcatca aaaactgaat
     1681 catttacaat gcaaacattg gttgtgaaac cggatagcat aatggttgct tctgtatatc
     1741 cttctacaga cagatcaaaa cgattttcat ccataaagga ctgaatatct gacggaatct
     1801 ttttgacggt ttctcctgaa tttccagcaa cgagaaaaac gccgtcttct gaaactgtca
     1861 ctgtttctct accgagaaac ttcattatga tgttgtaatc acttgcagac atcatcgcag
     1921 aacgggttgg gttagcctta ttgtaccaaa ggttaaatac agctttttga taaccgggca
     1981 agtcttgcag ttccttttca atcacagcca cgtcgccggc aacatctgca ttttctgtcc
     2041 aggcattata acttatagca tagggcatga tcttctccgt ttctgttttc acatttgtcg
     2101 atatggaaaa caggaggatg atggaaaaga atgaaatggc atacaataca gcggaaattg
     2161 tcattgtctg cgcatttgct ctcagttttg cttttttatc gctgctataa agcaaacgtc
     2221 ctcttgcatg actttttttt gaaagggcaa gggccatacg cattccatag gcaaacatca
     2281 aataagttcc agtgataatg gtaaaaacca acaccaaagc agtcacacta ttgtcctgaa
     2341 tctgtttagc catctgtgtc ccgcttgtaa aaagccaaac cataaaacca aataaaacta
     2401 aaaatacaat aagaaggggt aacagtttct gtggcttttc accggttact tcggttttta
     2461 ataaacgtac cacctctttc ttgcgaatca gccttggcgt aaaaaaagca atcgctaaaa
     2521 agacaattcc caagacaata acagtagtaa tgattgcctg aacagggaaa tagaaagtaa
     2581 agtcggatac gccgataact ttatttgcaa tgtccaaaaa gaattttgaa aacacaaatc
     2641 ccagcaaaat ccccgttacg atagatgcaa atccaacaat catgttttcc agaaacacaa
     2701 gtttgttaac ctgctttttt gatgcgccca aaatagtgat caaaccgaac tggcgacttc
     2761 gagccttcag aaaacatccc acagagtatg aaataaagca aacggaaaat ccaatggaaa
     2821 taagctcgcc tactataagg atcaacccca tggtgctgtc tcggtcaatg atactcatgg
     2881 ccgggtgaaa cgacagcact gtgaacagga aaaatacaaa tacagaaaac acgcagttca
     2941 cgaagtaata aatatagttt cttctgtcac ggctgatatt gttgcgggca aagtcaaata
     3001 aggtcatgcg gttcacctcc caaaagactc atagcatcca caatctcctg ttgaaaagtc
     3061 cttcgatttc catcggagac aatttcctgg tataactgtc cgtctttgat aatcaggacg
     3121 cgcttgcaat agctcgccac aaaagaatcg tgcgttacca tcaggatagt ggcatttttc
     3181 gtttcgttga gcatccggaa taattccata acatctttcg tagccttgga atcgagattt
     3241 ccggtaggtt cgtctgccag aagcaaagac ggattggtta caacggcacg ggcaaccgcg
     3301 gtacgctgtg cctgccctcc ggatatttca aaagtgcgtt tggaaaggag aggctcaatt
     3361 cctaaaagtg cagcaacctc cgcggtgcgc tttttaatct caggaacagg aacaccttcc
     3421 aatgtcaacg gcagcatgat attttcgccc actgtcaaag tatgcaccaa attgaagtcc
     3481 tgaaatacaa agcccaaggt attccgtcta aaatgtgcca gttggtcgtc attcatttcg
     3541 tggggatctt cactatcaat gcagacactg ccgctggtag ggtgatcgat ggtagaaatc
     3601 acatttaaaa gagtgctttt accactaccg gatggtccca taatggcgac aaattctcct
     3661 ttttcaatac taaagttaat atcattcaaa gcggtatatg gaacttttcc ctcatatact
     3721 ttaccaagat gttttgtcgt taaaattgac atctttacaa cctccttcat tgttctgcat
     3781 ttagtatagc tgatatctca aaaaataaaa atcgagaaag attacggaac atgacagttt
     3841 tgtaatcttt ctcgaaatgc tatatttcac tttttgcatg aaaataaata gtaaatgtac
     3901 ttccttttcc taattctgac tgcaccatta tggtatgtcc cagataatcc aggctttgtt
     3961 ttaccatata caagcccaat ccgcttgatt ctccgcgcag gcgtccattc tgtcccgtaa
     4021 aaaataaatc aaaaattcga ttgaagtcac gaggatcaat gccacatcct tcatcttgga
     4081 tactcaatga agtacattct tctgatctgt cagcacggac ggtaattttc tttccttcat
     4141 cactatattt gatagcattg gttaagagtt ggtacaacac gaaacgaagc catttggaat
     4201 cgctgtacac caccaaatca tctgcaatct caagttttgg aaaaattcct tttgtaataa
     4261 atgagctttt taactcgttg atacaatctt tacacatact gtgcaaattc actttttcgg
     4321 aatgaaaatc attttttatt gcatcaagtt tatacatatt caaaacctga tccaaatcat
     4381 attgtatttg cgccgctgat tgtgctattt tacgaaaatc cgaatcgcct tttttgtttt
     4441 ctgaaaccag acggatcacg gataaaggca tttttaattg atgcacccag cgataaatca
     4501 tgatcttact ctgcttttgc ttgtcctcca tacgagctaa ccggtttaaa tataacctgt
     4561 gctgttcctc aactaacttc cgatagtgct gttcctcgcg gcctttgggt tcgctgatta
     4621 gaaaatcctc caaggtcttg ttttcattac aaaggatttc ataaaaatcc catgtggaat
     4681 atagccggta aagcaagaag cacaataaaa taaacagaga taaaaataca taataccacc
     4741 atgttcctcc gggatttcca ctaattaaag tcaaataaac aatcataatg gaaaccggcg
     4801 ctgctaaaaa aagaagaatt acccataggt gatccaaaac aaaacatttt aaatgttttg
     4861 caagtttttt atttttcatg acgtgaatct cctatgcgat aaccaacgcc tctgacggtt
     4921 ttaacagcaa gggtggagcc aatgcgctct aatcgtttgc gaatccggct gattgtcaca
     4981 ttcaaggtgt tttcttctac aaaactctca tcatcccaaa tttcattcag cagttcctca
     5041 cggcttacaa tattcggata attctgaaac atcacccgga tcacacctgc ttctgttttg
     5101 gatagttccg tcatatgtcc atgacaagac aatgttaatt tgctttttga aaaaatacaa
     5161 tcttcacatt gtaattcatc tgcgttgaaa cttgaatact ctccatatgt gcggcggagg
     5221 acggcggaaa tttttgctgt gaccacttca aaagaaaatg gctttgtaat ataatcatcc
     5281 cctccgttca taatggcatg aacttgatcg gggtctgtat ttctggcaga aagaaatata
     5341 atcggacaag gactgatact tctgatctta ttacaccaat agaaaccgtt atagacagga
     5401 agattgatgt ccagcaaaac cagatgggga ttttccagct tgaattcctc aattacattt
     5461 tttaaatctt tacagcaata gactaaaaaa ccgaaccgtt gtaaatggtc tgagagaagt
     5521 ccggcaatat caaggtcatc ttctataatc ataattttat aatccatatt tatctccttt
     5581 tcccgtctaa aaatttaaca acgaaataac cgtacccgcc aaccaaagaa gaaataacac
     5641 gataggcact gctttatatt tgagaataat tgcgatatac tctctgataa acgcattcgg
     5701 ccaataataa aaagctgttt tgcatatgtc ccagttcgaa aaacatgata atcatttgtt
     5761 acaaaaatca cacggtactg ggacatcatc tgatccataa ttttttttga gaacatcatg
     5821 ttctcaagag ttgtggtgga ctgatcttcc atgataatgt tatgctcaga gattcctttt
     5881 tccagaagat aatttttcat ggcttcggct tcagatatat tttcatcact gccctggccg
     5941 cctgaaacta taatttttgc ttttctcccg gaactctcaa atacctcaat tcccttattc
     6001 aatcttccag ccagcagagg ggagaccctc tcgccgttaa gcagcccagc accatgtacg
     6061 ataataaaat cacagttttt gtttttcggc aaaaggtggt agagctgtga gtaaatgaag
     6121 agtgctgaaa aagtaaaaat aacatacatc gcgatgaggg caatcaatac aaccattgac
     6181 atcgtaatag tcgataaatt tttagctgaa atcgttactg ccacagcaac gaatgcgccc
     6241 caaattccaa ctccaaacgc aatagataaa ctgtgtacca aactgaaacg ttctcttttt
     6301 attgcaatca ctcctgcata gataaagaca aaggaaataa acagtaaaat caacgggatg
     6361 actgtataca gaactatatt aagtaaagta ttaactattg tcccatttgt agcataagcc
     6421 actgcaacaa atagcgatgc taagctcaat gcaagaaaga ttgaatttct gaaagcacgt
     6481 ttttccctca aaaatgaacc tataaatata gccgtaaaag ccccaaatat aatccaatat
     6541 atcattttct attcctccga atgccaatta catttatatc gctgatcaag gggcttctgt
     6601 gtttgtttgg gtattagcca aatacgattt aaatgcacta cacctttgat acggttttct
     6661 ttacaaagtt tctgcactcg tcgatctgac aagccccata gttttgctgc gtcttgtaca
     6721 gtcatatact cgaacattgc cgtcctcctt aatccatcta cttatattat ggacgtttag
     6781 ccgaataata tcaagttttt tagtaagata caataccggc aagcaacttt attatgcgag
     6841 caatcttcgc gagcaggttt tgcgcggttc gcaaaacatc ggttcgttag aaccgactgc
     6901 aaggaaaaaa gaaagcatcg agctttcttt ttgggctgca agcctacgtg tttagcgtga
     6961 gtaaactatc gttactcacg ctaaacacgt atctcatcaa aaatgagatt atctcaataa
     7021 taacatcagt agaataaata aaaataggca gaaaatatcg aaatctcctg ccctttactt
     7081 attccactga cttctttact attccacttt ttgagaaaaa atggatggtt atattcgtcc
     7141 ataaacataa actaagcggc agttttaagt tagccatctt ttacgactga atcggttact
     7201 ttactggctc atctttcata gaaaaatgga tttctctatg aaccaacaag tcaagttttc
     7261 atggttttct ttagtattcc aacattactg aaaatatgga ttattctaaa agtccatatc
     7321 gcaaatcaaa gtgggctact ctaatacacc attatttcta tcataatgga cctctattca
     7381 aatccacttt ttaagaaaac ttagacttct ttactattcc acatttagcg ataaaatggg
     7441 aaactctact taaccatctt ttagctagta atggactagt ttcactatca attgattcgt
     7501 taaggtaatg gatttttgaa aagtcatctt ttaccttttt aagttatact atttcctttc
     7561 tacagaattg gcatgtcgaa tacttttcag cttcttatct attcacagaa aaatatttct
     7621 gtgttttttt gattttgaaa atgtggcata gtaatatcgt aaaaattgaa tgactagagc
     7681 taaacactat ctggtgtttt ttcaacatca gatagacagg aggaaatagt gcgatttcat
     7741 attcgtaagg ttcaattatt tcaaaaataa tgactcagtt attcaactaa caaaatatag
     7801 aaaggagttt ttaggccgta ggtccagata aagtaacaaa gatatagtca caatcaaatt
     7861 gaaatattat taaataaatt ctgcatcata aaggaggaaa tattactgag tccatagtta
     7921 taatccagtt ttacgaatag cgaaaccaaa gcaagaaatc gttcaaatcg aaaaaataca
     7981 aaaaataaac gttataaagc gtttcaatta ttcaagctct agaatccaaa ttgagcattg
     8041 gagtagtctt ctccaatcaa aaaaacataa agaacacctg ccgcagcagg aagacactgt
     8101 tttcggaagt atcgcgttaa tcgaaaacac ctcaaccatt ggtacaaaaa agaaaggagt
     8161 cagttatgac taaaaataaa aaaagacgat cacgttcaga tcgtagaaaa atgaaaaaac
     8221 atgcgataga aaaacaaaac aaagcgctaa aaacaccaga aggccgactt cagtttgtca
     8281 attctcaagg agtttcaagt ttaaagaaac gattcaaaaa aggaaaaggc attaaacgta
     8341 aagaggccaa agaaacagga gatgacattg agttaatcca cactcatcgt acactccata
     8401 actattcggg ttcatggcat tgttttgcaa aatgggtttc aattcacatt tcaccagaac
     8461 agttaatggt attaggtaat gttgaaaaag atacggaagg ttggatagaa cttatcaatc
     8521 aatacttaca atattgtata gagattggtt taagtccata tacacaagca acctacaaag
     8581 cagcattggc caaagttctc ggagtttcct caactaattt tatcgctaca caaccacgta
     8641 cacgtgcaaa tcgcatgaac aatcgtgtat tacatacaga ctatcgttta tctaacaaaa
     8701 ataacgacta ctggcataaa gtagttgcct caacaggctt acgtaaaagt gaactgatcc
     8761 acgtcactgg tgacgctatg caacgtggcc gtgatggccg ttggtattta aatttagacg
     8821 gccataagca tcacacaaaa ggacgcagag atcgctggtc tcccatcatg gccactagtc
     8881 aagaggagga agagtggcta gtcgctattt tccaacgagc aggaaaaaag agagtgtttc
     8941 atgttcccaa agatttaatt ctcgacgatt ttgatggaaa gaaagttccc actgcattaa
     9001 agccacataa gtatcgtgct gagtatgcag agcgtgttta tcgcagtgta gcacgcgaaa
     9061 tttccaagat tagaaatcgt aaagaagtta tccatctacg taaagagtta gttggcatct
     9121 cactcgacag aaaagcttgt aaaattgtga caaaggctct gggacacaat agaccagagg
     9181 aatttcctcg ttcctacgct tatattttat tgaaacgcta ggcaacattg cacatttttc
     9241 aaaaatctag cctcaattca ttacacatgt ggcataatac ttgtatctag aaaatgaaag
     9301 gaattctata tgttacctca aaataattct cctcttctgt taaatagaca acaagcagcg
     9361 gaactacttg gaatagatcc taaatcattt gataagtaca tcagaagtca cccagacttt
     9421 caatgcttta tggtaggaaa acaagagcgc tatttgaagt caaaactgat taaatttatt
     9481 gaaagccact gcgattgacg gataatgatt gataaaatta gatttttcat atatcctata
     9541 tgtgactagt ctattttatc aatcattttt tatagaaagg ctgataaaat ggcaacaata
     9601 acaaaacgtg gtaactctta ccgtgcaact gtatcacttt ataagaaagg acaatataaa
     9661 cgagaaacca aaacctttag caacagaaaa gatgctgagc tttggacatt agaaatggaa
     9721 cttgaaaaag gtcgtggcaa gaacattgcc gaacgatcca ccttatttcc tgatttttat
     9781 agaaattggg tccatacggt caagaaaaat gatgttcgcg aagccacctt tataaactat
     9841 aaacgaactc tcgtagtagt tgatgacctt tttgatggta ttcaacttaa acaccttgac
     9901 gatctcgtca tgcaaaagaa aatcgaccaa tatgctgaaa cccactctaa aaaaacagta
     9961 aaagaacttg ttcttaaaat ccgtggttca ttgaaatatg cgtatgctcg tggtttgatt
    10021 agcaatgact ttggtcatct tttaaaagca aaagggcaag aacaagctaa acgaaatatt
    10081 ccactatcta tcacagaatt taaaaaactc agacaatact gcctaagtca tactgaggat
    10141 gaatttaatg ttcttgttgc tctcgccctt gagacaggag caaggcgtgg agaactttta
    10201 ggaattaaaa aagaagatat ttttgaatat ggtatcaaaa ttcttcgatc aattagtcca
    10261 actaatgacg atacccagct taaaaccaaa cattcaaagc gtgatatttc catcaacgaa
    10321 gatgtttatc aagctgtgac aaaacttgca caaacaaaag aaggctatat ctttgattgg
    10381 aatggattca agcaagctgg tcaacttcaa aagctgttaa aacagttggg attaacaaaa
    10441 acgacatttc atggacttcg tgacacgcat gcctcatttc tcttttcaaa agatattagc
    10501 ctagactata tttctcgtcg tctaggtcat aactcaatct taacaacaca acagtattat
    10561 ctagaattga tgccagaaaa aaagcaccag caagatgccg atgctttaag tctcttaaac
    10621 gacttatcac tataattaac accaactgac accaaaaagg tgccacaatc gttggtataa
    10681 taaggttttg attaacgttt tgagaactgg ctagctttac gtgctttctt aagacctggt
    10741 ttcttacgtt caaccatacg agcatcacga gtaagaaggc ctgcgcgttt caatgaatcg
    10801 cggaagtctg gatctacttg aagcaatgca cgcgcgatac cgtgacggat cgcacctgat
    10861 tgaccaccgt aaccaccacc gttcacgtta acgaaaacgt catatgaacc ttgagttgaa
    10921 gttactgcga atggttggtt gataaccaaa cgaaggtcag cgtgtgggat gtactcttct
    10981 acatcttttt tgtttactgt gattttacca gtacctggga ccaaacgtac gcgtgcaacc
    11041 gcgtttttac gacgaccagt acctgtgtat tgtgcttgtg ccatttagat tacgtccttt
    11101 cccttagata agacctgaaa tatcaagtac ttctggttgt tgtgcagcgt gagtgtgctc
    11161 agcacctaca aacactttca acttcatgcc ttgtgcacga ccaagtgtgt tgtgtggaag
    11221 cataccttta actgattttt caatcaaacg aacagcgttt ttagaacgca attcaccagc
    11281 tgagattgat ttcaatccgc ctgggtggtt tgagtgagtg tagtagatct tatcagttgc
    11341 ttttttacca gtcaatttca ctttctcagc gttgataacg ataacgaagt caccagtatc
    11401 agtgtgaggt gtgaaagttg gtttgttttt accgcgaaga acgctagcaa ctactgctga
    11461 aaggcgtcca agaggtacat cagtagcgtc tactacatac catttacgtt caacttggcc
    11521 tggtttagcc ataaatgttg ttttgttcat gatttctcct atacgaatcg tttttgttta
    11581 ctgggcggat gttccggtcc gcgggtattt ggaaggttcc ggggcctttc aaatggggta
    11641 aacaataccg tcttccattt tatcaaaact actgttctcc gtcaagttat tttactttac
    11701 tttttttatt ttttcttcaa cctaaagcaa ggatagaaaa aacgagcttt aatagcagaa
    11761 aaatgacgcc aaatccctat ctcctcactg actgccccat tttaaaatag gtgtgccgct
    11821 tgcctctgac cgccaaggac agagccaaga tattttcagg atctggcatg cgaccgtagc
    11881 ccccatctcc gatatggtga atgtccgaac ctacccgctt gttgctgagc ccaaactccc
    11941 gcaccgtctg gctatccgca ctctcctggc tagtcccaat ggtcgaaata accagaccac
    12001 cacgcgcctt gacctgactg acgatcggtg ccacgatttc ctcccgcaca cccggcaccg
    12061 tgccgaccgc aggaatgagg acaccgtctg cccccaagtc cacaaagtcc agcagtgctt
    12121 ggctgtccac taccgactct cctagaccag caccgtgcat ttttcctgca aagatcaggc
    12181 catcaaagtg ttctttggca aggccaatag cagagcggat tgcagctata gacacacccg
    12241 tagcaggatt acctgtcaac atgatgaagt ccacgccaag aacttgggcc tgtcgcagac
    12301 tttctggact gacctgacga cctggtttta gaaaaacctg ctggtcttgg acctcttggc
    12361 tgctatccac aggctccaag ttaatcccaa ccaatcgacc cgtcaaccgc ttgatttcag
    12421 cgataggatt gtcgcaatcg taaaaaccaa caatctccgg atgaaaaaca tccaattcat
    12481 tgagtaccaa aaaatcgcaa ccaaaggctg ccatcatctc cgcattggtc acccccgcaa
    12541 tcaagggagc cgccgtaacc actgtttctc ccatgataat ccgaccttcg ctggataaaa
    12601 tggactgctt gagctcctcc ttggtcgctc ccaccatatc actggcatag catgacaata
    12661 agcgtttcat aagaacctcc aaatggataa atatagtttt gcaatcgctt tcttttgttg
    12721 aaaaaagaaa agagattatc tccctttctt attgatggat aggatagcta gcacccctgt
    12781 ccctgtatgg gtggcaataa ttggccctaa ctctgtcaag aacacatcag taacacggct
    12841 gtcttccaac aaggttgcct taatcgcttc agccgcctca atatcacctg tataggccac
    12901 catgaccgta gaatgatcca agttgtccaa ggtcaggttc aacatttcct taatcccttt
    12961 tttacggcca cgaattttgg caatggcttc taacttccct tccgcattga gcgcaaggag
    13021 gggcttgata ttgactagac cgccaatgag ggctgccgat ttagacaagc gtccacctcg
    13081 caccaaatga ttaaggtcat cgaccaagag gtaggtccgt aggcgtggga ccaagtcctc
    13141 gatgagcgcc ttggtttcag ctaatgactt acccgctgca cgcgcttgag cggcctgcat
    13201 gaccaagtaa ccttcaccga tagcagcagc cttagtatct acaatttcaa tgacaacatc
    13261 aggataagca tccaagacca tatcgcgtgc aatggttccg ctctgatagg tccctgaaag
    13321 agctgctgag aaagcgaggt aaagtacctc tttgccttcc ttggctgccg cttcaaaaac
    13381 ttcttcaaac tgaccaacat tgacctgact ggttgtcggc tgactgccag aagccatttt
    13441 ctccagtaat gctgctgagg tcaagcggtt ttcaccgact gtttcatagg ttacgccatc
    13501 taggttaatg gtcaaaccaa gcacagtcac atcattttct tggacccagc tgattggcaa
    13561 atccgatgtc gaatcggtta cgattgtaaa tgtcactctt tcatttcctc catcatttct
    13621 tttaaggctt gaaaattccc atctgaccag ggattgagcc gtggggtgta gagttcgacc
    13681 tggtccacaa acttgtccaa gtccttcttg ataaccctgg ttctctcctc caactcacgc
    13741 gccgaaaccc gtaaggcccc ttgcgagaag accacccatt gttcattgag gtcgctggtt
    13801 gcgacggaaa cctgcttgcg gcggtcacta ttgagctggg cgctgagtcg ctcgatatag
    13861 ctatctgccg tctcttcctc ctctgtaaaa atgaccgata ccttgaattc gtcatattgc
    13921 tggcgaagac ctggcacatg gtgggcatca aagacacaaa tcacctcaat ctgttcaaag
    13981 gctgcgtagt gagacagggt tcgaagcaag gtcgttctgg ccgcgtccaa gtctcccttt
    14041 ttaaaatcct gcttggtcga ttgccaaaag gcaatcatgt tgtagccatc tacaatgaga
    14101 actttttctt tcatttagat tttcttccga aatacttcgt acatgagtac agcggctgct
    14161 acgctggcgt tgagagattg gacatggccc ttcataggaa tagtgatcat ctcgtcgacc
    14221 tgctttttga tattgctgga gatgcccttg ccttcgttgc cgataatgag agctagcttg
    14281 ccagccgtat tccacttgtg gcttggagtt ccgttcatat cggtaccaaa tacccagaaa
    14341 ccagcctcct tgagcttatc tagggtttgg ctgagattgg tcactcgggc gattgggaca
    14401 tgggccaccg cacctgtgga ggtcttagcc acaacgggcg tcacgccaac tgctcggtgc
    14461 ttgggaatga tgatgccagc tacctgagtg gcatctgcgg tccgcaaaat cgagccgaag
    14521 ttgtgggggt ctgtcagacc gtccaagatg agaatgaggg gattgtcttc ctgctctgcc
    14581 ttttccaaaa tcaccgacag gtccgcatag gcaaactcag agacccgcaa gacaaagcct
    14641 tggtgaactg ccccttctgt catgtccgac agggtcttct tgggcgtcca agaaatcgac
    14701 acctttttct ctgccgcgag ggccttgatt ttttctacat tttttccgcg taaatcatcc
    14761 tggatgtaga gcttgttgcc ggtgttggcc tccaaactct ccaccacagc atgtacacca
    14821 tatacaatat cattatgttc cataagagta ttatagcata tttttgaaaa ggaaaaagcc
    14881 gagaatttct cagctttctt agttcacact gttttccaga taataatgtt agacaacata
    14941 ccagttgaca cccccttgtt ccggatctgt atcatactca ctagcttcca actccccacg
    15001 actattgatc cgataactcc aatctcgtgg ttcaaaatta gggtctgatg gtacagttac
    15061 atctgcatat actagaccat cttctgccat acgaacactt atgacaacct ggtcttttcg
    15121 atacttttca atcatgacgc tacggctaaa taaatcatcc atgacccaag cttttacctg
    15181 atctgtcgtt aagtttttgg tatcaacctg cggtacagga ttatgcaaat ctgtcaacga
    15241 aatccaaccc tgtcctgact ttaatctgcc ccaactatgt ccttcctttt gagtcgtctc
    15301 aactatcgtg tacgttccag gttctatatt ggtcacaact tctccagata aactaggttc
    15361 ctgacgaata accagtcctt gttttttaat atccacagta aacaattgaa cggcgctacc
    15421 tacctgagac tggctagaag cttgcgaact tccagcagtc ttactagtgg ctacctcact
    15481 agttgaacta tcctcaacta cggtagtatc ctttgcatct acatttttag caataattaa
    15541 gttaaccgca cttccccgct ttaccttctt cccactactt ggagaagata cactaaccat
    15601 cccaggcgga actgactgtc caccaacttc tgttattgta ccaactttta acccctcttc
    15661 atacagtaaa tccttagctt cagatagctc aataccatat aattcaggaa ctgtaacttg
    15721 agaactatct tggtagacaa aatataagcc agccattcct aacacagcca caacacttga
    15781 aatgattagc catatctttc gtctttttgc gtctgccaaa cgtttctcag cttgctctct
    15841 ttgataattc tcataatctt cctcagcttc gctaagcatt tgctggatga caaatcgttg
    15901 actctcatcc gtaacctgtg ctaagtgcaa tcgtaattga aaaattctat ccttaaactc
    15961 tttttcaatt tgacgctcat gctctttttg caaaatgtta ttttgttttt gaagtgctat
    16021 tgcttgagca ctcatggctc gtgcttgtgc attcatactc ctaatttttt cattgtgtcg
    16081 ttgctgtttc tcaaaagaat tcattgcact taactctccc tctcttcatc gcttaaaatc
    16141 tactccagag cttataggat tggtattgca tggtaatgca atacctgtta tactaagtat
    16201 aacagggcat ataaaaaagt tcctgtgcaa acaattagat tttacttttc tttaaatctt
    16261 ccctctatac ttcaactcaa atagttgccc acggttagat agcgtggtat ccttatgctt
    16321 atcaatttgt ccgtacaagc ggaccaaaag gagaatgtat gacacttatt tttggaattg
    16381 tagcaggtct gattgccttt gccatcggtg gtttgtggta tggtttgatt ttccgcgatg
    16441 tttggatcaa ggcttcaggc attgacatgg ctaaggtaga agcagatcgt caggctggca
    16501 aaaatggtca gaaggaaatg gtgatttccc ttgtcattga agtactgact gctgttgtgg
    16561 ctattttctt catcaaaacc cttgatgttt caccactcca cgcagctggt ggcatgggcg
    16621 tgattgcagt ccttgcttca ttgaaaaact acgtctttga gcaacgccct atcaacctta
    16681 tccttatcaa cgaaagctac aagctggtct gctacctagt agttggtatt ctggctctgt
    16741 ttgcataaga ttaaccctcc tagctttagg agggttttgt ggtacaatag aaacagatta
    16801 agaccaaagg agttcccatg tccctctccc tccgaacgat taaactgata tttgccaccg
    16861 ttctggctat ttacctagcg accgccctag gtttgtccta tgcgacagct gccggcatca
    16921 tcgccattct cagcgtcctc gacacccgca agtccagctt caaaatggct cgcaaccgtc
    16981 tcttctccac cctcctggcc ctgaccatag ccgtcctgac tttcgccctc ttcggctttg
    17041 gcatctggac tctcggcatc tacctggccc tctatgtccc tttggcctac cgtttcaact
    17101 gggaggctgg catcgcccca tcgaccgtcc tcgttaccca tctcttgctg gagcaggata
    17161 tttcgctgat ttttttggga aatgagctgg cgctttttct gattggggca ggactggcac
    17221 tcttgtttaa cctctatatg ccctcgcaag aaaagaaaat cgaggcctac cacgaccaag
    17281 tcgaagacct actcaagcag attctccttc gctttgaagc ctttctgctc aacggcgacg
    17341 gacgaaacga ggcagaattg attacacagc tggataagac cttggatgag gccctgaaag
    17401 tcgtctacct agaccgccac aaccagctct tccaacagac caactaccag gtccattact
    17461 ttgaaatgcg ggccgcacaa aacaaaatcc tgcgaaccat ggcaggaaat atcaacaagt
    17521 gtttactgga aggcagagaa aatgtcatcc tgtccagcct cttcgaacga acagcccagc
    17581 aactaagccg agaaaattct gccaaggaac tgcttctgga catcgaactc ttccatgcca
    17641 ccttccgcga gcgacctctg ccgcaaacca gagaagaatt tgaaactcgg gccaccctct
    17701 tccaactcct acacgacatg gaagccttta ttcgcctcaa ggttgatttt tatgaagtct
    17761 ataaagacca agaaccgtca gtttaagccg acggttcttc tacttttcca tgaaactcat
    17821 ctgatacttg gttgtgcaaa tgcacgaaag ataggcccat catgaccgca ttccctgcga
    17881 ctgcaatcat aaattcttcc ttagaagata cctttcctag ccaaatggag aggattaaaa
    17941 tgagattata aagcaaaata taaagagccg ttatacgaat ttttctcagt aacttcttca
    18001 taaggggacc tcctgtaagt gttttctata tttattatat agaatttaat aaaaaaaaaa
    18061 caagtattta tgcgttctca acccaaaaaa ccgccagatt ttcatctagc ggtcaggtgt
    18121 tttatgaacg attttagaaa ggttagacaa tcgccttgct tgtttcatca tcaaagaaat
    18181 gagctttgtt gaggttgaaa gtcaagcgaa ccttgtctcc tgggttgtgg tagtcgcgtg
    18241 catcgacacg agatacaaac tctgtgctac ccactttaga gtaaagcata gtttctgcac
    18301 cgagaagttc agacacaact acttccgctt cgataattga acttggataa gtgtccaatt
    18361 ccagctgaga agctttaatg tcttctggac ggataccgag ggtaaatgat ttgccattgt
    18421 agcctttttc ttccaagtgt ttgcgacgcc cttctggaag atctactttg aaaccatctc
    18481 caacaagcac accctcttga agagtcactg taaagaagtt cattgcaggg ctaccgatga
    18541 agctggcaac aaatttgttt acaggtttat tgtaaagctc ttctgggcta ccaatttgtt
    18601 cgatacgacc gattgtacct gtacctgctg ggtttttagt cgcagacatg ataacgatac
    18661 gatctgccaa ggtcatggct tctgtttggt cgtgggttac gtagatggtt gttgcaccga
    18721 tacggcggtg aattttagca atctctgtac gcatggacac acgcaatttg gcatccaagt
    18781 ttgacaaagg ttcatccatc aagaatactt ttgcatcacg aacgatggca cgacccatgg
    18841 caacacgttg gcgttgtcca cctgaaaggt cagctggttt gcgttccaag aattctgtca
    18901 atccaaggat ttgggccgct tcttctacac gtttcttgat ttcgtccttg ctgtatttac
    18961 gcaatttcag accgaaagcc atattgtcaa atacagtcat gtgtgggtaa agggcatagt
    19021 tctggaagac catggcaata tcacggtctt ttggagccac atcgttcatg agaacaccgt
    19081 cgatgtacgc ttccccttct gtgatatctt ccaaaccagc aatcatacga agagttgttg
    19141 acttaccgca tcctgaagga cctacgaata cgataaattc cttgtccttg atgtccaggt
    19201 tgaagtcttc aactgagtaa tgctcgctgt ttgggtattt tttatagata tttttgagat
    19261 ttagttgaac catgttcaat cctcgctttc tttgatggtt ttattgtaaa tgaaaacgct
    19321 ttatttttct atgtcaagtt gaccaaaaga aaaaagatat tctgtgcaag ttgcacaaaa
    19381 tatcaaaatt gtctatctaa taatacttga taacaaaaac tcagatcagt caggtctttt
    19441 aattggagtc ccgtcaaatc ctgccacttt tccaaacggt attggagagt attgcggtgg
    19501 atatagagga cttgagcggc cttggtaacc acagctcctt ctgtccatag ggctagaatg
    19561 atagcctgca tatcctgctg atcaatcagc tccagcatac tggcttttat caggctaaat
    19621 tctaagcctg ctctgccttg tccccaaaga aagagttgac taaaggagag gacggctgac
    19681 tgctggtagc gtgcccgcca gtgagcaaag agttgagctt ctgcttgata gagtcgaggc
    19741 cagtggtctg cgacgtgttt gggccagacc tgcccaacaa agagggtcaa ccgcaagcca
    19801 aagtcaaact ccaaggccga tagggtgtcc tgtaaaacgg tctgatgatc catccagatg
    19861 ccctgctcca atacaatgag ataatcttga ggcgtcagct gcacctgagc cagttgactg
    19921 ggcaagaggt cggtcatcat ggcctgccag gcatccagct gggcctcttt ttgtgaccaa
    19981 aggtggatat ggataaattg aatggcctca actgtctgag gaatccttcc ctgatcgtgt
    20041 agataggcct gccagggact tgactggacc tgctttcgag gatgtgatag caaggacaaa
    20101 aggtagcctt cccgatccgt caagtctgca tcagacaagt ccagataaga tccgtcgccc
    20161 aattgaagtg agcattcgcc ctctacttgt gacaactttg cctgcggaaa ccagcttaca
    20221 agttcctttt cgtccatctt atcccctttc tattttgtca atacaccaac ccaccagctc
    20281 ctccaggcgt tccatctgct cggtcatgtg caaatagcct aaaaccgcct caaagcctgt
    20341 ggacatccgg taggtcacca cgtccgcatt cttggccttg gtgtgactgt tggtgttgcg
    20401 gcccctcttg tagatttctt cctctttttc ggtcaatagc cgagcttcta agagggcaga
    20461 gatcaggctt gcctgagcct tggccgagac gtatttgtta gcctctccgt gcaatttatt
    20521 gggcttggtc agccccttga aaatcaagtg ccgtctgata tacatggaat agacagcatc
    20581 cccttcaaaa gccagggcaa tgccattgat gagattgaca tctactgcct tagtcacgtg
    20641 tccacctcac accatccttg gtatccaaga gcttgatgcc ctgggctgcc aattcatcac
    20701 gaatacggtc agccgtcgca aaatcccgat tggcacgcgc tgcttgacgc tcttctatca
    20761 aggcttcgat ctcgctgtcc aagacttctt cttcaaagac aataccaaag acggcaagca
    20821 ttttgccaaa ggcttctttt acagtttcat cgtagttgcc tgagttgatc cacttggcaa
    20881 agtcaaagat agccgtaatc ccattggccg cattgaaatc atcatccatg gctgcttcaa
    20941 aggccgccaa atgcaattca agacctgact tatccacaga gttttgcaca ggttgtgtat
    21001 aagtattttt cagatatttg agattgattt ccgcatctga aatagccttc tcagtgtagt
    21061 tgagcggacg gcggtagtgc tgggtagcta ggaagaatcg caagacctga ccgtcaattt
    21121 gttccaacat atcatgggct gtcaggaaat tacccaagga cttggacatc ttctcatcgt
    21181 tgatattgag catggcattg tgcatccagt agttggcaaa ggtttgaccc gttctgcact
    21241 cagactgggc gatttcattg gtatggtgag ggaattccaa gtccgctcca ccaccgtgaa
    21301 tatcaatggt atctcccaaa atctctgtcg ccataaccga acactcgata tgccaacctg
    21361 gacgacccgc tccccaagga ctttcccaag aaacttcgcc tggcttggca gttttccaca
    21421 gggcaaagtc gaaaggatgt tctttcagtt gaccttctcc ctcaacccga ccagaagcac
    21481 cagcctctaa gtcagatagg gttttgttgg ccaaacgagc atagttttca gccttttcca
    21541 cacgaaaata aacatcccca gccgcctcgt aggcatagcg cttgtcaatc aagacctgca
    21601 caaaatcaat gatttcatcc atgtagtcga tgacacgagg atttttggta gcaggcttga
    21661 cacccagttt tgccacatct tccttgaaag ctgcgataaa tttatcagac agttccttgg
    21721 ttgtcatgcc agcttcatta gcagctttga taatcttgtc atccacatcc gtaaagtttg
    21781 agatgtaggt tacatcatag ccacggtatt caaaatagcg gcggatggtg tcaaaagcca
    21841 ccacactccg agcatttccg atatggatat aattgtaaac cgttggaccg caaacataca
    21901 tcttgacctt accctcttcc aagggcacaa aatcacgcag actgcgagtc atggtatcgt
    21961 aaattttaat catagtttct ccattacttc tgagtattct ttaggacttg atacttttga
    22021 tacaatttta ctagccaata agctgtcgcg gccaaccaaa tcatccctag ctgccagttt
    22081 ccttgggaaa acttaaggat agatagaatt gttccaccga tggaggtcaa cacataaggc
    22141 cagttttgtc ttactaattt ttttaacatg atctactttc taatgttctt gcaatggcca
    22201 tggctacctc aaagaaggtc atactgtcag ccgttcgttc tgcccgacgg gcatcccatt
    22261 cattcttgtg gtggtccaca tagtctgccg tgtagaaaaa ctgatagacc ttagcctgac
    22321 gaaagtttgc ccaggccatg atagcagaag cttccatatc gaccaccatg gcaccagcgg
    22381 ctaggcgacg cttgaccttg gcagcggttt cccgaaagaa agcgtccgtg gtccaggtct
    22441 tggcccgcac gtgctcaatc cctgcttggt ccaaggcctt ttccatggtt aatagagaag
    22501 cagggtcata gctgatttcc tcgctggcag gagcgtagtg gtaactagtt ccctcgtccc
    22561 gaagagcaga gctaggaagg ataatcttat ccgcagcaag cgacttatcc agcacaccgc
    22621 aggaaccaag aacgataaaa ttctcaaaac cacaggcttt cagctcttcc agatgaccaa
    22681 ctgccattgg agcaccgatt actgccaaca tgaccgcaac ctgcagtcca tctctttcca
    22741 aaatatacca aggatgacaa ccatttaggg tctgtaaatg accaccctct ctgctctcag
    22801 gtaactgacg gacacggtct acgatttccc cattgaagga gaaaatcatg gtctcacata
    22861 cctcaccgcc accacgaata gccttgtccg tcggttcaat gacagcagag gtgttttcaa
    22921 attcttctag taacatatca ttctcctttt gggtctaagt agaccacttg tgtctgcttt
    22981 gtaaaaccga tattttcata cagccgctta gcgatgaggt tgtcatcttc gacggcaatt
    23041 tgaaaaggtt tgtcgttttt cctgataagg tcattgatga cagctttgac taagtaggtg
    23101 ccgtaacctt tttgttgctg gtctggtgcg atagctaaac cgtaaagata gttatcatcg
    23161 gtcgatatat ctactgtgca agaaccgata accgctccgc tatgttccaa aaggtaaagc
    23221 aagctgtccg catcagcgat agcctcacgt gcgtaacgaa gagccacctc atagtcgcta
    23281 tcaaagacct gtgtctgaaa acgtgcaatg tcgtctgcat ggtgagcctg tgccaaactc
    23341 actgtgagtt cagcttgttg tgagagctga taaggctctc gctcacgtcc cagccatgtc
    23401 tcagtatccg tatcttctac caagttccat actgtcacaa ggtctgggtg cttgtccaga
    23461 aagacacgtt cggtctgaaa ggtcacacta gcgataggat agttagccgt cttcatctgg
    23521 tagcaatcat agagcttgcg tgccaaaccc tgtctgcggt agtctgggtg cacaagaatt
    23581 gcaagctcca catcctcatc atcggcatac acagtcaaga gtcccaccaa ttgttcgcct
    23641 tgataagcca agaaaaaagc tggcatttca gggtcaaagt tgagcatatt tgacaggtaa
    23701 gggtcacgat aggttccgtc atgggattgt acagtgctta tcagagtttt tgctgcagat
    23761 aactgctggg aatttaggac attagtggct attatcatgc ttatttttcc tctctatggc
    23821 taactcacat agaccttacc atgtgcggct ttcctacaaa tgcgacgaat ggtggctagc
    23881 ttctcgtaat tccgcaagct tagtcgtgta gtgttcacga ccaccttcca tgtcatgaat
    23941 gaccttttca tctttttgac cgtggacacg gacaatttta gctggcatac cgaccactgt
    24001 cacatctgct ggaacgtcgg ctaggacaac ggcagctgca cccactttag cattttctcc
    24061 aatttcaata ggaccaatga cttgggcgtg ggcagaaaca agggcaccct ttcgcacagt
    24121 tggatggcgt ttgccggtat ccttgccagt acctcccaga gtcaccccgt ggtagagcat
    24181 gacacccgac tcgataatgg cagtttctcc gataactaga cctgcaccgt ggtcaatgaa
    24241 gactcccgaa gcaatttcag cacctggatg aatttcaata ttggtccaaa aacgccaaaa
    24301 ttggctgtgc atccgagcca gtaatttaaa gccttttttc cacatccagt gggacaggcg
    24361 gtgggcagcc aaggccttga cacctgggta agtcaaaaga acttccaagg tcgtccgtgc
    24421 tgccggatct ttttctttta caatctcaat ggtgtccttc caccaaccca tagtcactcc
    24481 ttctagcgag aagacaagtc cgctaccgaa cttgtctact cagcttattt cttttcaacc
    24541 ttgtggaatt tgaattcacc aaagttgttg tcttttttct ctttgtgttc ttttttgtcg
    24601 tgatctttat gacggcgagg tttgtctgaa cgctcgcgtt tttctggctc tacatagcct
    24661 tctggtttcg gaagaagagc cttcatagaa gcgtcaatac gtcctttatc atcaatcttg
    24721 ataactttaa catcgacaat atcgccgatt tcaaccaaat cttctggttt attgacacgg
    24781 gtccaagcca tttcagaaac gtggaccaga gcatcagtct tgtcaaagag gttgacaaag
    24841 gcaccgaatt tctccaaacg aaccactttt gcttggaaga cttcgtccac ttttgcttca
    24901 cgaacaagac ctgcaatgat ttccttggtc cgttcaatcg catcgcgatc tggcgagaag
    24961 atagcgacaa gaccgtcttc gtcgatatcg attttcacgc cagtttctgc aataatctta
    25021 tcaatggtct caccgccctt accgataaca atcttgatct tatccacatc aatcttgata
    25081 gtgtcaatct tcggtgcggt tggtgccaag tcaggacgaa cttctgggat agttgcttcg
    25141 atgacatcaa ggatttcaaa gcgagctttc ttagcttgtg ccaaggcttc ttccaagatt
    25201 tgcggtgtga taccgtcaat cttgatgtcc atttgaaggg ctgtgatacc gtcacgagta
    25261 cctgccacct tgaagtccat gtcgccgaag tggtcctcaa gaccttgaat atcggtcaag
    25321 acggtgtagt tggtaccgtc tgaaatcaga cccatagcaa tccctgcaac tggtgccttg
    25381 attggcacac cacctgccat aagggcaagg gtaccagctg tgatagaagc ctgtgatgaa
    25441 gaaccgtttg attccaagac ttctgctacc aagcggatag cgtaagggaa gtcttccaag
    25501 ctaggcaaga cttgctcaag agcacgctca ccaagggctc catgaccaat ttcacgacga
    25561 cctggcgcac cgtaacgacc tgttgatccc actgagtatt gtgggaagtt atagtggtgt
    25621 aagaagcgtt tcttatactc atcatccaaa ccgtcgatga tttgagtttc acccattggg
    25681 gccaaggtca agacagaaag ggcttgggtt tgaccacggg taaagagacc tgaaccgtga
    25741 acgtttggca agaaatctac ttctgcatcc agcggacgaa tctcatccac acggcgtcca
    25801 tctgggcgga ccttgtcttc tgtaatcaaa cgacgaacct ctgcgtgctc catgagctcc
    25861 aagatttcat gaacatcacg catgatgcgg tcgaattctt cgtgttcagc gtatttctct
    25921 tcgtaagctg cgatgacggt ttcacgcacg gcattggtcg catcttcgcg ggccaatttt
    25981 tcttctacct gcaccgcttt tttcaaatca tcattgtaag ttgcaacaat ctcagcctgc
    26041 aattctgggt caacttgaag aagctccaca tctgcttttt ccttgccgac tgctgctacg
    26101 atttgatttt ggaagtcaag gagttcttga atggccgcat gacctttgag aagggcttcc
    26161 aacatgatgt cttctgacaa ttctttggca cctgactcta ccatgttgat agcatccttg
    26221 ttaccagcca ctgtcaagtc aaggagggac tcttccatct gagccttgtc agggttgatg
    26281 acgagttcac cgttgacata gccgacctgc acacctgcga ttggaccgtt gaatgggatg
    26341 tctgagattg ccaatgccaa cgaagaacca aacatggctg ccattggagc tgaagcatct
    26401 ggatcgtaag aaagcactgt gttgatgact tggacttcgt tacggaaacc ttccgcaaac
    26461 atgggacgaa tcggacggtc aatcaaacga gctgtcaagg tcgcatcggt tgatggacgg
    26521 ccctcacgct tcatccagcc acctgggaat ttcccagcgg cgtacatttt ttcttcatag
    26581 ttgacttgga gggggaagaa gtctcccgtc gccatttttt tggacatgac tgccgctgtg
    26641 aggactgttg agtcgccata gcgaacaaca accgcaccgt tggcttgttt ggcaacctgg
    26701 ccagtttcaa cgaccaattt cttgccagca aaaaccgttt caaatacttg ttttgacatg
    26761 aattgtctcc tatttttctg aaatttttct tgcgtgtttt ctacaaaaga caatcaaaca
    26821 aacttgtttc actctctttt gcacaaaacc acgcatactt cttattttat catatttgac
    26881 ggaaaatgtg gggaattgag gaaggaattt ctgataggaa ccgtggaaaa acgaataaag
    26941 aactgcccat cgtaaaaccg actctaaaat caactatcta taatatatga aaagttggaa
    27001 cccatgtact tctcatcttt ttaaaccaat caaaaacacc taatgccaac tcattctgag
    27061 gaatttaggt gttttatcat catctaaact gattcccaat tttaacttag tattactggt
    27121 ggaatcttat ctccaaataa tattacatat gtaagcaata atacactaaa tttaattaat
    27181 ttctttttcg tcttgcgact cctgttccaa taaatctata aggagtgact gagctaaatt
    27241 ttttaagagc tcatcgcctt ctaagtcata aacaactatt gattttttga ccatatcaat
    27301 tgcttctgaa ataatggagc gttttgctaa tatgttggct ctcattaaca aagtattgcc
    27361 taacataaat aaagtgtttc gattctttaa taattctagt gattctgcat tataaaccaa
    27421 ggctttttca aaattattac acaggtacaa aattctagaa tatccgtatt gaaataatac
    27481 tttcagctcc cagtcatttg attcatgata gtgatgaatg agactttcat attggttcaa
    27541 tgatgctgca tactcttcta actccgaata tattcccgca atggcaatcc ctactcgtaa
    27601 aaatagatta acattttcaa ccaaagtagg cagcaaccct tccaaaatct ctaaagcctc
    27661 atttgacttt ttgtatttcc caaataacaa taccccgtta aggtattgta tatatggcat
    27721 ttgaatcgga gatacagaat cttttgaaat aaattgtaaa aaatattcca atgtatcata
    27781 ctctcttcgg taaagaatgg atttcaattc atccgtaaga atagattctt ctgtactctt
    27841 ctttagttga aacaattcca atatcatact agaatcaatg tctaattttt tgacgagctt
    27901 aaaaaataat tcgactgatg gagaaacttc agctttttca attttactaa taactgcttg
    27961 agcacaaata ccctcagaca gttctttttg actgaatcct ttctccaaac gcgtccgctt
    28021 aataagacta gcaatttttt ctttcacaat tcacattcca attcatagta ttttctctat
    28081 tgtaccacta ttcggatgaa tttcccatat ctcatcgtat aggccaagat ccgactctga
    28141 atagtgatga gcaacctcaa agattgtaat tggtaaatta gcaagctttt tacgaatgag
    28201 ggctgaggat tgtttatcaa ttgctgatgt cccctcatca actaacaaga ttttcttatt
    28261 atgaatgagg gctctggcaa tctcaatacg ttgtttttgt cctcctgata actgcgcccc
    28321 attttcacca taatatttct ctaaacaatc ttcacctagc tcttctacca aacccagttc
    28381 taaaagcaag gctaacaact cctccttact gactgattca agtgccatta ggagattctc
    28441 ttttaagctt gcctcaaaat agtagggtga ttgttggatt cttgccattt gattgctagg
    28501 attacttatt tttttctgat gattgaatac agatatttcc ccttccaacg gttgcagtac
    28561 actctgtatg ctatctagta aggtcgtctt tccacttcct gaagctcctc taatcagcac
    28621 tttacgacca tatgggactg tagcattaaa atttttgata attgctgctc catgtccaat
    28681 ggctactcct gaaaaatgaa tctcaggctt caatattgat tcatcaatat gattttcaga
    28741 cacttcctgt tgctgagaat cctgtaacat tttctctaat tttttccgag ttggctccgt
    28801 tgattgtatc attcgtaaat agttcgaaac atttctaaat ggatagataa cacggtcact
    28861 ggctaaaaat aaagcgataa caatactcgc atctagtttc ccttgggtta caaatactag
    28921 agctacagtt attggaacaa tataacttaa ccacgacagc atggaagaaa caagattaac
    28981 tatgctgtgt ttattattta atgcctcatt actattttct aagtcattga caactatctc
    29041 agccatccct aaaaacttac gattcgcacc ataggtccat agaaccgaaa aaccttgaaa
    29101 aatatctttt atgctacgaa taaatttctc attcgactta gtaaagttct ctgttgcagt
    29161 tcctagatat ttgctaaata gtattgctgg caacattgga agaaatgaga aaataataaa
    29221 taatatagaa attgcaggac ttagatagac aagatatatc aatgaaactg cccctaaaag
    29281 actgtagtat aagcaatcaa aaagaacgga aaaatattta tcttctacta attttaaatc
    29341 tactgttaat accgcaagag actctgtaac atctaatgca tttcctttat ttccaagata
    29401 gtttaacagt tccatcttat accttttatg cagatttttt agtaagtcgt tttttattat
    29461 tgaaacaaat aaatctgata attgaatcaa taaatagaac aatatactgc aaccggcgaa
    29521 tagtaaaaca tcttttacag ttgattccga gctaaattga ctgactctcg aaataacctg
    29581 agacataata atcccgtcaa agctcgctcc taccaatgca agcaagagta agcatatttt
    29641 aaacttaggc aatattctcc atacctgtct taatttcata acccgttctc cattttctaa
    29701 agatttcatc aagtaaatat aaagcaaatt ctgaggatgc tgtttgtatg ccttgcttat
    29761 ctttgacgta tctatataaa acgagtataa aatacttttt caaaaaaaac aatcacttta
    29821 ttatatttta tataattttt ttgttattta taaacattat tttaatttta tgttcaaaaa
    29881 catggacttt tagcccaaaa tctctatcca ctatcaaaga ttcatattgc gcttgaataa
    29941 gacaaacaaa aagaacctga aatcaggttc tatatgaatt gttgaaacaa actagttcgt
    30001 ttcatttcca gcctccaaca gactgtcgga gcgagctaaa agtctggcat tcagcttgta
    30061 tgctaaagca cactgcgatg aattcctatt tttgctggac tttcttaacg ctctaacatc
    30121 ttgattagtc gaacacagcc taaaaacgcg gaaaaaagag aatggaaaaa taaaaaagaa
    30181 cctgaaacca ggttctatct gaattgaact tcggctagaa gctgtgcgaa atagataaat
    30241 tttctgacaa gtaaacttgt tgcaaaaatt tcctaatttc gctgtgcttc tcacgcctcc
    30301 gtatcttata ttaacgacgg agtccgagtg agtgaatcaa ttcacggtaa cggttaacgt
    30361 ctgtgcggcg taggtatgcc aacaagttac gacggcgacc gatttttttc atcaaaccac
    30421 ggtaagttgc gtggtctttt ttgtgttgtt tgatgtggtc gttaaggtgg ttgatctccc
    30481 aagtaagtac tgctacttgt acttcaactg aacctgtgtc gccttcatga cgagcatatt
    30541 gtgccatgat ttcatttttt ttctcttttg agattgccat gatatgttct cctttgtttt
    30601 tgagcctaat ccgagtgaca ggttggcgac ctgtaaccaa gaaaaagcta gatttgtcct
    30661 tttggacctc atttattcta tcaaggattg tcttttttgt caactgattt gaaaaatagc
    30721 tgagctgctc tgctattttc aaaaaaaagc cagccggagc tgactttctg ctattttcaa
    30781 acttactcag ccttttctgc ttttggtaag atgaggttga ggacgatgcc gacaatggct
    30841 gagagggctg ttcctgagag ggtgatggca cctatgttaa gaactgcacc accgaggccc
    30901 aataccagca tagaacttgc gataatcagg ttgcggactt gcccgaagtc aactcggctt
    30961 tcaatcaaga ctttcaaacc gtttgaggcg ataaccccgt agagcaagat agacatccca
    31021 ccaagtacgg cacttggaat ggttgagata agggctgtaa atttacccaa gaatgagaag
    31081 gcaatggcaa tcagggctgc gttacggata acggatactg atgcgatacg ggtcataccg
    31141 ataacccctg tattttcacc gtaggtcgtg ttggctggtc cgccgataaa ggcagatacg
    31201 gcagtcgcca caccgtcacc aatcaaggta cagctaagac ctggatcctt caagaactgg
    31261 cggccacaga tttggcttag aaccgtgtgg tctccgatat gttctgcgat agtcaccact
    31321 gcgattggca agatggcaat catttctgga ccaaagtaga aattgtagga tttgaaagca
    31381 cctgtttcaa atggtaggta gaaacctggc aattcaaacc aagctgcttc cagaacaggt
    31441 gtaaagtcaa ctagtccgag gaagatagca atcacataac caccgatgat ggcaatcaag
    31501 aagggaacaa tcttggcgaa gcctttccct ttggtattga caaaagcagc aatcaagaag
    31561 gttgcgatcg ccacaacgac atttttccag tcgccgtctg cgacaaagcc tgctgaagtc
    31621 acggcagagt tggcaagacc cagaccgata acgataatca tcggaccgat gacaatcggt
    31681 ggcaagagac tgtcaatcca cttagtaccg ataactttga caagtgctgc gatcaagaca
    31741 taaatcaaac cgacaaagag aatacctgtc tgcgcagctg acacatcacc gcccatttcc
    31801 ttgatagcaa gcgccatagc cgaaatgtaa gcgaaagatg aacccaagta aaccggcacc
    31861 ttaaactggg ttgccacttg gtaaatcaga gttccgacac ctgatgcgaa aagggcaacc
    31921 gaaactggca taccgaggat taacggcacc aagattgtcg ctccgaacat agcgaacacg
    31981 tgctggaaac tcaacaaaat cccttgcaag ggtgctggtt tctcatggac atcaaacaaa
    32041 agattggctt ttgtactcat aaatctccca ttctgggtac gcaaaaagac ccagactttc
    32101 taaatataca tagtcatagg cccttaattg attttcctgt tgtctttctc acctcacggg
    32161 atgagtttaa aaacctacgc ttttggtatt gtagcataaa gaggaagttt tttgcaagga
    32221 attttgtaaa tttttatttt ttaggaaaat ggcagagcag gaaaggcgaa ctcaattgtc
    32281 tatccaagct cttcttccaa ctctttttcc acctgcttct gacggtaggt atttacccaa
    32341 gatactatgt tcagcaataa cagaacaaga caggtcatag aaataaagaa tattaaaacg
    32401 actgcccaaa aatgtccatc ccaaatacca gtataatgat gaccataggt ctggtaattg
    32461 gtccaagcta ttacaattgt tgtgccacca attatccctc ctagataaag gtaacctttc
    32521 caagcaggcc cccgttccat atctatcccc ttcttccagt aaccgtaaaa gagatagacc
    32581 gaaactacca acatggcaag cagttcaaaa acataggtat caaacgacca ttttaagaca
    32641 aggcgcttga tgagaaatga gagaggcaaa agaatattca tggtcctgcc cacccaggca
    32701 aagacttggt tttcttcttg tcgcacacgt tcatcagtca caattttttt cattagttgg
    32761 ttcctcccaa aataattgat ctaaactttt ccctaaacaa tggcaaatcg atagacaaag
    32821 actaagactg ggattgtatt tccccgcctc aatcagaccg atggtctggc gggtcactcc
    32881 gatagcctcc gctaagtccc cttgggtcat atctttttct acacgagcca gcttaagtcg
    32941 tatgttcttc atatcatagc catcctcctt tcgtattttt atagttatat tatacactat
    33001 attttctatt ttgcaatata tacattacat tttgtttggt ttttttaaca aaagaggctg
    33061 ggcaaaaagt ccagcctctc ttctcagagt tcgc
//
LOCUS       DASFQS010000010        32928 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.010, whole genome shotgun sequence.
ACCESSION   DASFQS010000010 DASFQS010000000
VERSION     DASFQS010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 32928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32928
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.010"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..171
                     /locus_tag="U1041_000466"
     CDS             <1..171
                     /locus_tag="U1041_000466"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767595.1"
                     /translation="RLEGRAEGRLEGQLKIARQMLVEGFADEMIARLTGLSQEDLDGL
                     KTGGLDATKADF"
     gene            215..1063
                     /locus_tag="U1041_000467"
     CDS             215..1063
                     /locus_tag="U1041_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class C sortase"
                     /protein_id="HEM4767596.1"
                     /translation="MKLKIVGYLLMIVGLLLPLLLFSNMTVHEVREFFAYQSYKKSES
                     GFSKKEEEIIEHYQEVVRSGQLATVDPFAETRKDEQSVSDFGDTIIGYVSIPSLEIRQ
                     PIRVGASDSHLDQGVAVVSGTDLPFGGLDRRSVLAGHRSWYSDLRFFRLNEMREGDEI
                     FVEIGEKVVTYRVKNTEIIKATDWQKLLPIEKQDVLTLLTCDPLVPPFDYRLLVNAYR
                     HHDSSEQVAASEEKTQSSQAVLESYRKKGVSFIAYLTLFGWFLFVYLAYKLGKLVRVC
                     RVTKVR"
     gene            complement(1156..1983)
                     /gene="xth"
                     /locus_tag="U1041_000468"
     CDS             complement(1156..1983)
                     /gene="xth"
                     /locus_tag="U1041_000468"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEM4767597.1"
                     /translation="MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQE
                     TKLSDKGPTKKHLEILESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLTPTITFPEI
                     GAPTTMDSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYAEYLSQLDSQK
                     PVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLN
                     AYTWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVMEIEL"
     gene            2139..3800
                     /locus_tag="U1041_000469"
     CDS             2139..3800
                     /locus_tag="U1041_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767598.1"
                     /translation="MKRKLFVFAWLALVLEMLIYYWYQLPALNILSVDFWIFFLQSVG
                     LVWLILSMFSSKGAFQKVTKISGRQRQVDTYQIKTSQLPAYLKWLGRIWVLVVLGLLG
                     LGLINSRVFRAKDYAAVISVKDADFKADFPETDISKLALLDRASAEKIGDTYLGTIDK
                     VSQFGISDDYRQITIGQQPFRVSPLEYKNFWKWLSNHQDGIGYYVKVNQTTGKAELAK
                     LSKAMHYSDSEFLLNDTLRHLRLQYPTTIFGKPSFEVDDEGNPYYIATIYEPKFGLSS
                     NDPIGAIVLDAVTGESKKYSLEDIPEWVDRVYSANNVISRVDDHYTYQNGFWNTIFSQ
                     TGVKNTTDSYNYISIGSDIYLYTGITSATADSSNLGFILVNMRTREITNYKLASATET
                     AAQESAEGEVQEKGYKATAPSLVKLADTAYYLVSLKDDAGLVKSYALVDAEDYQQVTV
                     NNDIALLISQVTGTDASSLSGLTVTENGEVGEQTEVISGKVEALASQIIGGATIYYIE
                     SEGKIYKVKATEDSTDRLPFIKVGDHFSGQLDKKNYLKNFKVNPE"
     gene            3960..5348
                     /locus_tag="U1041_000470"
     CDS             3960..5348
                     /locus_tag="U1041_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM4767599.1"
                     /translation="MSLFRKKQAVGRHSQMRRHLGLVDLIFLGIGSMVGTGIFTVTGL
                     AAAQYAGPALIISIVIAAISVGLTALFYAEFASRIPTNGGAYGYLYSVFGEFPAWIAG
                     WLTIMEFLTAVSSVASGWGAYLKGLLVNFGIAMPTALNGTFNPAAGTYIDLLPVLVLI
                     FVVGVVLLNSKAALRFNSALVVLKFSALALFILVGLFFIKPENWSNFSPFGFGAIYGG
                     QAGIMAGASLMFFAFLGFESISLAIDEVKKPEKNVPKGIVLSLFIVTILYIVVTLVLT
                     GMVHYTKLNVADAVAFALREVGLDWAASYISIVAILTLITVCISMTYALSRMVYSISR
                     DGLLPKSLSRLTQTSKVPKNATILVGIFAAICAGIFPLASIASFLNICTLAYLIMLAL
                     GIIRLRQVEGLPKAGQFKTPFVPVLPILSIIICLSFMFQYSFDTWLAFGVALIVGSLI
                     YLFYGYRHSEVK"
     gene            5460..6341
                     /locus_tag="U1041_000471"
     CDS             5460..6341
                     /locus_tag="U1041_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HEM4767600.1"
                     /translation="MTNSDIRAKATVIREQTDGMITLFLAPVLISFLSGVAEFGLKQI
                     WGRTGIVFWGSTIVKDGVTWSHNYISLDPSIIFDFIVQCLIVTACFQLIRVVRKQRDK
                     VSFSECFSLLDGKNFLPILVTTFLKMLVIYIAGFPAVIGMALLSISFFSTVFIVGAPV
                     GYQPDFSGFFSSSYFQIGVILVVIGLVCGLLVDYGLSQVQFLLYDHLENNIYSSPFKL
                     FKQSWQLMKGNKWRRFMLDLSFIGWFIGILLTFGLLALYVYPYYWTCQALFYEDLIAK
                     NPLLLSRVDSVWSSELG"
     gene            complement(6453..7334)
                     /locus_tag="U1041_000472"
     CDS             complement(6453..7334)
                     /locus_tag="U1041_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767601.1"
                     /translation="MKTAFISEKAKSRFNLNFILSPITALVLMAVAETVGYFAFMPLF
                     FIFIDNAFVTLSLELLAFAFISLAIILWARFVEKSPWLGLGIRKKGALKDFLLGWGIG
                     AAMLITCVLLMWGFGAIQVTSFQFSANLVGEFLILVLAWSIQGTTEELLTRGWMFSSL
                     AAKHNIPVGILVSSLFFTFLHLGNDGISLIPLLDLTLFAILACLVMLKTGNLWVISGI
                     HAAWNCFQGNVFAFPVSGTQAGQAFIAVETSGPDWLSGGAFGVEGSVISLLIQAGMIT
                     WLVYELYFTSPSTELEL"
     gene            7448..8065
                     /locus_tag="U1041_000473"
     CDS             7448..8065
                     /locus_tag="U1041_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3885 domain-containing protein"
                     /protein_id="HEM4767602.1"
                     /translation="MQLQDWLSDFQFGEHQLVGPFFYGTPLALRFEIGPADEAETLPR
                     KVYLDRAYARAVELLEQASSAYDYVILSLLRQEDRDIDTYLWHFSSKFNFDKVPEPEL
                     IEVEDWTGEVLVFERYLFPVADQDLKALLREIIKADHGGFNYLSSSVLFLSSKDKVIY
                     HCYDDRGVDIAVVDDDKRRQLFTDCYDLLFDYDMEEMERRMDFKN"
     gene            8257..8562
                     /locus_tag="U1041_000474"
     CDS             8257..8562
                     /locus_tag="U1041_000474"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767603.1"
                     /translation="MAKFDISTIEDKIQQLLEVGFDQASFIYEFLSFYDIPKATITRI
                     RKDKSGEIKNKLYYKTVPTDKSVVAGVAEIEVVIKDKKSQLRIRYFINYKVCEVENT"
     gene            8601..10700
                     /gene="dcm"
                     /locus_tag="U1041_000475"
     CDS             8601..10700
                     /gene="dcm"
                     /locus_tag="U1041_000475"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000528407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEM4767604.1"
                     /translation="MGNSILNKAKYSGNNTDEWYTDYKTVESEVQHYESQFIGKKVLC
                     NCDNPYDSAFAKYFLKNFNRFNLKKLVCISYANSEIHSSEDGRGLILEIDEMSPAIID
                     CLDENKLFDMLVNDRKLRKLTGDGDFRSPESIKYLIDSDIVVTNPPFSKFSELFSLLT
                     KYHKKYLLISNQNAITYKEIFPYIKKNEARVGYHFGDMSFKVPDSTEPRKTRFWVDEF
                     GQKWRSLGNAMWLTNLEVPTNSKKKLVLTHKFIEGNYPKYDNFDAIHVYRVSEIPMDY
                     YGIMGVPLTYLKYHNDEIFEIVGEANHGSDNEYDLFKPKINGKEMFKRILIKRRESDK
                     EMEFRILDLFCGAGGMSYGMHKNPHFVTKVALDVNEKVAQTFRKNIPGSELIIGDIKD
                     KEIKKKIIDLSKKNKVNMIIGGPPCQGFSLKGKKLGLEDPRNFLFIEFLHLVKVLQPL
                     VFVIENVKNLMSTSNGWFKEQIINEIKKLGYEVSVGILRASDYGVPQNRERVIFLCSK
                     KNAISLPEPTVKSLTTVRDAIEDLAYLNSNEGDFEQSYITEVRTEYQKLMRKDSVKLY
                     NHRASNHSEIAIHKLSMIPPEKGKEYLPKKLLGKQKYKSTWGRLKWDEPSPTIDTRFD
                     AASNGTNNHPFLHRSITPREAARIQSFDDRFIFYGSKVDIRTQIGNAVPPLMAKAIAD
                     QIYENFVNNEGEVIENE"
     gene            10693..11565
                     /locus_tag="U1041_000476"
     CDS             10693..11565
                     /locus_tag="U1041_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009369747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767605.1"
                     /translation="MNNQMAYLVGMILGNGEVQRDTNYTTVTIEIPHKNLRDDEGLEV
                     SVYVKSSLADIRSIIEPLLGHSLPISQTKNVTRVSFTKSNEDYTMREILRFIGNGVHH
                     STMVMNGELFNMTIDEKKELLRGVADVTGYIRKSNLAFGQDGCHRVYIEIPGNWQFVI
                     DIANMLKTLDIPVQTIDFGHPNFRDSNLKKYKQGKTKYWKKEHQVKIWANEFLPIGFN
                     VVHKQRALERYAEELLDYLDENKTHQFYWEKAVRLRSKPIHPMENDDSLPEKIRGKHF
                     DSWTQLAKELGYGE"
     gene            11555..12058
                     /locus_tag="U1041_000477"
     CDS             11555..12058
                     /locus_tag="U1041_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000002923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767606.1"
                     /translation="MANKVRSEFELYPGMVKWLDTYLREKFKNKRCEVFVLDCHSVYL
                     DSILNKYDVIQYFPQVVGLKIEIDVLGIVRWKDRAEIYFVEAKKAALTLQNLGQLLIY
                     CKLCNPEEAYLLSSDGLGSLQKVLINLKREDLLDYGSGKRIKKINVARWDISKDGVDN
                     HSIIPKI"
     gene            12097..12264
                     /locus_tag="U1041_000478"
     CDS             12097..12264
                     /locus_tag="U1041_000478"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767607.1"
                     /translation="MGTLNAVKQDAFYDKRVQLETISPTGKKVSVTEWFVVELEQIEK
                     KINELFKQLNL"
     gene            12598..13347
                     /locus_tag="U1041_000479"
     CDS             12598..13347
                     /locus_tag="U1041_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767608.1"
                     /translation="MPYRKLTSSDRTFIKGQTDRLMNQMNSNAEYLATVQTYEAAKAR
                     MNQAYLAMELEDDPEKKVRLAKLVETYAAQAQAILDEWEEKNRHAEKAARNIKLILWL
                     TVLFTLSFVFPVNIILAILFAVWFYRNYLRSSKFDRVTKTAAISQSLTEEERFEEWLT
                     EKIVTLNKDKRQWTEDVLAKYDSLDEIAAGIGKIDEIDKEAGKKILHRYQAILADIEK
                     LPDSDQKTYYLDFHREIIADLEDLFQQLHFG"
     gene            complement(13386..13979)
                     /locus_tag="U1041_000480"
     CDS             complement(13386..13979)
                     /locus_tag="U1041_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HEM4767609.1"
                     /translation="MFTKKNVFIHLFFLIIAVGLKRYGVTAPDLTWNMFLALVALDFA
                     ILTNHSKSKVIMVIAGLLWLFFYPNTFYMVTDIVHMHFANTVLWQRESMILFMLYVPS
                     IIFGVMTGVESLRLIFTAFSIKSYWIRLFLIGGLSLLSSFAIHIGRYARLNSWDIFTR
                     PSLVISEMIEVISWAALPFILGFTFIQIMVLVFSIDE"
     gene            complement(14112..14706)
                     /locus_tag="U1041_000481"
                     /pseudo
     CDS             complement(14112..14706)
                     /locus_tag="U1041_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775192.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
     gene            14862..16865
                     /gene="metG"
                     /locus_tag="U1041_000482"
     CDS             14862..16865
                     /gene="metG"
                     /locus_tag="U1041_000482"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019313364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEM4767610.1"
                     /translation="MTKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEV
                     FYLTGLDEHGQKIEEKAKEAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHE
                     EVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEFFTESQLEEVFRDKNGKVTGGIAPSGH
                     EVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRT
                     SFTWGVPVPSNPKHVVYVWIDALLNYATALGYGQEETANYDKFWNGTVYHMVGKDILR
                     FHSIYWPIMLMMLDMKLPDRLVAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRY
                     YLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLLNRTVAMINKYFGGQVPTFVANVT
                     DFDADLAAVVAENLASYHKYMEAVDYPRALEAVWNIISRTNKYIDETAPWVLAKEEVD
                     RDKLAAVMAHLTAGLRVVAHLIQPFMMTTSNAIMEQLGLGTAFDLENLDFAGLPAGLT
                     VVAKGTPIFPRLDMEEEIAYIQAQMGGSSAISQEEEKEWNPADVELKNEKAAIKFEDF
                     DKVEIRVAEVKEVAKVEGSDKLLKFRLDAGDGQDRQILSGIAKYYPNEQELVGKKVQI
                     VANLKPRKMMGLLSQGMILSAEHGGNLTLLTVDPSVPNGSQIG"
     gene            16929..17870
                     /locus_tag="U1041_000483"
     CDS             16929..17870
                     /locus_tag="U1041_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HEM4767611.1"
                     /translation="MLVALDEDGQVFNVLENPAPQGRFCCPGCGGLVRYKSGKVLRSH
                     FAHVTLRDCTYFSENESAQHLSLKSSLYKWLQGQEEVELEAYLPATKQVADLLVNQQL
                     ALEVQCSSLPISRLQLRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
                     HLWELDDERKQLRLRYLIHEDLRGKVHCLTKIFPFGQGNLLDILRLPFAKQALSRMNC
                     RLDRDLPAYIARQLYYKTPKWLALQEEAYGRGENLLTKTVLDWYPHYRLPRSAIGFAQ
                     IKQDLTPIYQVFDQFYDKAKDKRKQILYPPIIYRKPM"
     gene            18099..19901
                     /gene="pepF"
                     /locus_tag="U1041_000484"
     CDS             18099..19901
                     /gene="pepF"
                     /locus_tag="U1041_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEM4767612.1"
                     /translation="MSKQRHEIEEKYQWDLTTVFPTDDAWEAELVDLQAETEKTKEFA
                     GHLLDSAKSLLEISETQLGLMRRIEKLYVYASMKNDQDTREGKYQEFQAKAMGLYAAF
                     SQAFAFYEPEFMAITEEQLEAFKAEEPALVQYSHQFEKLLAAKDHVLSQEVEEVLAAT
                     SEIFESPAETFSVLDNASLLFPEIADEDGHLVPLSHGNYIHFMESKNRDVRQEAYEAM
                     YGTYEQFQHTYAKTLQSNVKVNNLKARLRKYDSARHASLAANFIPESVYDTLVAAVNK
                     HLPLLHRYIKLRKKLLGIEDLKMYDMYTPLSDFSTKISYEDALKKCQETLEIFGEDYS
                     AIVKEAFENRWIDVHVNEGKRSGAYSGGAYDTNAFMLLNWQDNLDNMYTLIHETGHSL
                     HSMLTRKTQPYVYGHYSLFLAEIASTTNENLLTEKLLAEVEDDKERFAILNHYLDGFR
                     GTVFRQTQFAEFEQAIYKADQEGQVLTADFLNELYGQTNEKYYGLSAEENPEIQFEWA
                     RIPHFYYNFYVYQYATGFAAASALANKIVNGSPEDKENYLNYLKAGSSDYSLNVIAKA
                     GVDMTKEDYLNDAFKVFEARLEELEALVEKGVHL"
     gene            19903..20346
                     /locus_tag="U1041_000485"
     CDS             19903..20346
                     /locus_tag="U1041_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767613.1"
                     /translation="MISYKRSIVIPSVISLVFILLGLGGLTRPEPSAGSVVYLIFLQP
                     LLVYLYILRKQKAVFILTNQYLEFQEHFWSERQRHSLEEIAEIRYMVSPVYRGYQSKR
                     LRIVGNKGALLAVVNLNKLDGADFNDIYHFVEQVAPHIRWDFSNS"
     gene            20357..20905
                     /locus_tag="U1041_000486"
     CDS             20357..20905
                     /locus_tag="U1041_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767614.1"
                     /translation="MLTEEQLQDIFELADLMSNSDRELFLQLRDVVFASDPNQILDSI
                     ERILEPDSFDDFLDRVGESEKENLWLILIKLLEHFNYICVRDYKDNLEDFIYFFDRLH
                     QVRNAGISLKLDSDGLNPAASISEWARVVDSKYLDENFCLGAVDIDTDSYYLFFSKQE
                     TFVRLRELAGNLGYRIDYAKNM"
     gene            20980..21699
                     /locus_tag="U1041_000487"
     CDS             20980..21699
                     /locus_tag="U1041_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEM4767615.1"
                     /translation="MVESYSKNANHNMRRPVVKEEIVDFMRTRQAQNTGFLKELEEFA
                     RQENIPVIPHETVAYFRLLMQTLQPKHILEIGTAIGFSTLVMADNSPHSKITTIDRNE
                     EMIGFAKENFAKYDQRQQIELLEGEAMDILPTLPDDAYDFVFMDSAKSKYIVFLPEVL
                     KKVKVGGLIILDDIFQGGDVAKDIKDVRRGQRTIYKGLQRLFDATLDNPDVTASLVSM
                     SDGLLMLRKNRENVDLKLTEI"
     gene            21762..22763
                     /gene="prsA"
                     /locus_tag="U1041_000488"
     CDS             21762..22763
                     /gene="prsA"
                     /locus_tag="U1041_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PrsA"
                     /protein_id="HEM4767616.1"
                     /translation="MKQTKKILAGAVTLFAAVTLAACSNAADKDIITMKGNTITVSEF
                     YEKVKTNSQAQQVLLSMIISDVFEDQYGDKVTAKEVDEAYDKMAEQYGDSFATALSSA
                     GLTQETYKEQIRTNKLVEYAVKQAAEKELTDENYKAAYDAYTPEVTARIIKLTDEAKA
                     NEVLAAAQAEGADFAQLAKDNSTDTATKDNGGEVKFDSTSTTVPTEVQNAVFALDAGQ
                     VGASVISVVDMTTYTTSYYVVKLEAKSEKSANWEDYKDKLKEIILAQKQSDSTFVATV
                     LKEALQKANVKVKDSAFQNLLSQYVTTEESSSSSTESSSSSTESSSSTTESSSSSGQ"
     gene            23125..23610
                     /locus_tag="U1041_000489"
     CDS             23125..23610
                     /locus_tag="U1041_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LURP-one-related family protein"
                     /protein_id="HEM4767617.1"
                     /translation="MKQFQVKQRFTFGGEKFDIRDSFGDLAYQVEGSFLEIPKRFIVT
                     NSRGGEVCQITKKFLTFLPQFTIDMADGHSFYLQKEFTFFKDRYTVENLGLILDGNIW
                     DLDFRLKRTDGMLVAEISKELFHLTSHYSVTVLEDSYADLVISLVVAIDYIEMMEDAS
                     N"
     gene            24092..26710
                     /gene="alaS"
                     /locus_tag="U1041_000490"
     CDS             24092..26710
                     /gene="alaS"
                     /locus_tag="U1041_000490"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000661542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEM4767618.1"
                     /translation="MKNLSSAQIRQMWLDFWKSKGHSVEPSANLVPVNDPTLLWINSG
                     VATLKKYFDGSVIPDNPRITNAQKSIRTNDIENVGKTARHHTMFEMLGNFSIGDYFRD
                     EAIEWGFELLTSPEWFAFPKDKLYMTYYPDDVDSYNRWIALGVDPSHLIPLEDNFWEI
                     GAGPSGPDTEIFFDRGTDFDPENIGIRLLEEDIENDRYIEIWNIVLSQFNADPAVPRS
                     EYKELPNKNIDTGAGLERLAAIFQGAKTNFETDLFLPIIREVEKISGKTYDQDGDNMS
                     FKVIADHIRALSFAIGDGALPGNEGRGYVLRRLLRRASMHGQRLGITEPFLYKLVEIV
                     GNIMESYYPEILEKRAFIEKIVKSEEESFARTIHTGSQFAEQLMDKLAAEGKSEIDGR
                     DIFKLYDTYGFQVELTEELAEHRGMTLDIAGFEAAMKEQQDRARASVVKGGSMGMQNE
                     TLAAITEESTFVYGQTALEASLSVIVADNARTEAVSEGQALLVFDQTPFYAEMGGQVA
                     DHGFVKNAAGDIVATVIDVQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVEKN
                     HTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW
                     NAIPVVTVETDIDTAKEMGAMALFGEKYGKEVRVVTIGDYSVELCGGTHVSNTAEIGI
                     FKILKEEGIGSGTRRIIAVTGREAFLAYRDQEDALKEVAATIKSPQIKEVPNKVESLA
                     QQVRDLQKENAALKEKAAAAAAGDVFKEVKDANGIRYIASQVQVSDAGALRTFADNWK
                     QKDYSDVLVLVAAIGDKVNVLVASKSNDVHAGNLIKVLAPIVAGRGGGKPDMAMAGGS
                     DASAIQTLLNSVAKNL"
     gene            26785..27237
                     /locus_tag="U1041_000491"
     CDS             26785..27237
                     /locus_tag="U1041_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEM4767619.1"
                     /translation="MERVSDIWQELYNQAKVHYAPHYVSPFIYSNHVVAAIEAEDGQI
                     YTGYCFEATAGVFHLCAERAAAFNMFQDSGQTTIKRIIAFRDQAPFGEGSGMPCGACR
                     EFLMQLSAENAQTEIMVDFDKRETITLGELMPYWWGEERMQAGVDHLE"
     gene            27441..27638
                     /locus_tag="U1041_000492"
     CDS             27441..27638
                     /locus_tag="U1041_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767620.1"
                     /translation="MKQPFMITGTTVARAVEIGSILLLAYILLSDLLGWSDMDTALMT
                     TLIASIACIEASLQMEKKGNK"
     gene            27779..28333
                     /locus_tag="U1041_000493"
     CDS             27779..28333
                     /locus_tag="U1041_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HEM4767621.1"
                     /translation="MENKKKLYEVDVRSDKKLAARLYVTTILLVFPFFWLFGFIASKV
                     EFQNVMNELQFIEALFIFLLLIIMHEWIHGLFFKIFCPKNPVKYGIKWKTGMAYAISL
                     NSLYNRFQTVVIALAPFVLISLGLTASAMFGWLDKGAYQILATMHSVACIGDFYYTYL
                     LMAKCKEVAVEVAVTEKSLIIYQA"
     gene            28346..28555
                     /locus_tag="U1041_000494"
     CDS             28346..28555
                     /locus_tag="U1041_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019771076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767622.1"
                     /translation="MEYVLKNRLKELRARDSLNQTELAKLAEVSRQTISLIERGEYTP
                     SVVIAMRIAQIFNENVENVFQLVEV"
     gene            28558..29289
                     /locus_tag="U1041_000495"
     CDS             28558..29289
                     /locus_tag="U1041_000495"
                     /inference="COORDINATES: protein motif:HMM:NF022811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3169 family protein"
                     /protein_id="HEM4767623.1"
                     /translation="MKKGFVKKHWKLGLLFILGWATGATASALNRTDLPKLVDIGTIL
                     WGVRLPALGLLLAGAYFAYTASQTHKEYELVDEDEEDLLDQVSNKMYRSLEYAIILTN
                     CVSALVIMSLFVSMQLVSDGKIPLVDSLVDAGLFVILLMANYIVLKLIHKIRNYKLSI
                     FSTFEDVKAYLDSYDEGEKQASYEMSQWIVFTLNQLVLPSLYGVLLVISAILKEQQLV
                     AYLVVVFIHLYINIMQYRMVRRYFK"
     gene            29320..29829
                     /locus_tag="U1041_000496"
     CDS             29320..29829
                     /locus_tag="U1041_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3278 domain-containing protein"
                     /protein_id="HEM4767624.1"
                     /translation="MKKENLHIRAIRYFYDIVGELDEVSYATLTNFGNNMYMLFMTVT
                     LVSFLVSFALGEDVMGISLFLTLVYSQFKQDAIIKQLGLDKLVVAKADVKLARKKMMK
                     RTLFQALQIAVLSLLVSIGLWQLQIPQESGTSAAEYFQFVTPMTVVLLTMVGFLSFYI
                     VNRKKIKLI"
     gene            29849..30034
                     /locus_tag="U1041_000497"
     CDS             29849..30034
                     /locus_tag="U1041_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767625.1"
                     /translation="MKFFKKIYLVLLIGLGLYAVDYIFGEWLATGQIDLSNLNILLPM
                     VLGLPALLLIEKESNEN"
     gene            30060..30749
                     /locus_tag="U1041_000498"
     CDS             30060..30749
                     /locus_tag="U1041_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767626.1"
                     /translation="MNRLGNVKDWNVVKNWKFLLVGLAVVALNVLTQMAMFTLPNFDG
                     NNLLIAAALILLAVLLGLILTGKLGLWKGEQKWGMGANVGFVVLAFIVMFGLKIIGGQ
                     LIMLEEGYGQTTANQEIINNSGLPTLVLFLFAVLFAPVLEELIFRGILMGKVFGKDSN
                     VGLLLSSFLFGLIHNPTNIGSWVVYGGMGLVLGLAYRISGKYTNALILHSLNNLLGFL
                     LMLLMQSLGLI"
     gene            30759..31076
                     /locus_tag="U1041_000499"
     CDS             30759..31076
                     /locus_tag="U1041_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767627.1"
                     /translation="MELFLWIIVGFLFFNSLSDRKKVKQLQARVKKLQKTTKGENQMS
                     VLLKELVGSKAKIRFDEEFSITYEYTILAVDEEWVKISRELANGEIETKLVRVDNIVD
                     LSF"
     gene            31086..31760
                     /locus_tag="U1041_000500"
     CDS             31086..31760
                     /locus_tag="U1041_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767628.1"
                     /translation="MLKFIKHVALLFLYFVAYQIASGFLMVGPTLQSIPDIPAQLIDS
                     TIWICAIIGLVLSIALIILLWKYIYPRHSVDYRVTASWFHKIQWPILLYIAFFIFQFI
                     VPVPESENQKLVIEFVSAYPLIAFSSVVIFAPILEELIFRGFFATYFFPKMADMKAVG
                     IYLFVTGSLFSLVHMPATLPQFLIYFTMGLNLGWLYLIRRDIRYPIALHMLNNGISYL
                     MIVFLV"
     gene            complement(31796..32755)
                     /gene="nrdF"
                     /locus_tag="U1041_000501"
     CDS             complement(31796..32755)
                     /gene="nrdF"
                     /locus_tag="U1041_000501"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004253599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HEM4767629.1"
                     /translation="METYYKAINWNAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDW
                     RKLTAEEKDLVGKVFGGLTLLDTLQSETGVQALRNDIHTPHEEAVYNNIQFMESVHAK
                     SYSSIFSTLNTKSEIEDIFEWTNSNEYLQRKAKIINEIYETGTPLEKKVASVFLETFL
                     FYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQDKLR
                     DWMYDLLYQLYENEEGYTRSLYDAVGWTEEVLTFLRYNANKALMNLGQDPLFPDSADD
                     VNPIIMNGISTGTSNHDFFSQVGNGYLLGEVEAMQDDDYLYGL"
BASE COUNT         9842 a         5900 c         7388 g         9798 t
ORIGIN      
        1 cggttagaag gacgggcaga aggcagatta gaaggtcaac tcaagattgc tcggcagatg
       61 ttagtagaag gtttcgctga tgaaatgata gcgagactga caggactaag ccaggaagac
      121 ttggatggtt tgaagactgg aggattggat gcgacaaaag ctgatttcta gaattgaatg
      181 ttgagcatcc aaagagcaac tgagtgagac ggtcatgaag ttgaaaattg ttggctatct
      241 attgatgata gtgggattat tgttgccctt attattgttc agcaatatga cagttcatga
      301 ggtgagggaa ttttttgcct accagagtta taaaaagtcg gagtcaggct tttcaaagaa
      361 agaggaagag atcatcgaac actatcagga agtagtgcgg agtggtcaac tggcaacggt
      421 tgatcccttt gctgagacta ggaaagatga gcagtccgta tctgattttg gagataccat
      481 catcggctat gtaagtattc ctagtcttga aatccgccaa cctattcggg tgggagccag
      541 tgattcccat cttgatcagg gggtagcggt ggtgtcagga acggacttgc ctttcggagg
      601 tctggatcgt cgtagtgtgc tggctggtca cagaagttgg tatagtgatt tgcgtttttt
      661 ccgattaaat gaaatgcgtg aaggcgatga gatttttgtt gaaattggtg aaaaagtagt
      721 cacctatcgg gtcaaaaata cagaaatcat caaggcaacc gattggcaga aattgcttcc
      781 gatagaaaaa caggatgtct tgaccctttt gacctgcgat ccattggttc cgccctttga
      841 ttatcgtctt ttggtcaatg cctatcgtca tcatgatagt agcgagcagg tagcagcttc
      901 agaagaaaaa acacagtcta gtcaagcagt gctggaatct tatcgcaaga aaggtgtaag
      961 tttcatcgcc tatctgaccc tttttggctg gttcttgttt gtctatcttg cctacaagtt
     1021 gggcaagctt gtgagagtat gtcgagttac taaagtacga taggtagagt gtaacaggaa
     1081 taaaagaaaa aagacttaga gaaccaccgt ttctgatggc tgttctaagt ctttttgttt
     1141 ggagaactgt attatttata gctcaatttc cataacaatc ggtgtatggt cttggcgggc
     1201 accagaatca atcatgtctg acttacttac tttgtcggcg atgcggtcgc tgacaagcca
     1261 gtaatcaatc ctccagcctg tgttgttgat tttactggtg cggctacgtt gtgcccacca
     1321 agtataggcg ttgagaacat caccgtgcaa gtggcggaag gtatctgtaa aacctttagc
     1381 aagtagattt gtaaaacctt gacgttcttc gtctgtaaat cctggtgact ggcggttgct
     1441 ggctgggttt gcaaggtcga tttccttgtg agcaacgttg tagtcacctg tggctaagac
     1501 aggcttttgg ctgtcaagct gtgataggta ttcagcatac tgaacgtccc agatttggcg
     1561 gtcggcaagc cgtttcaagc catcgccagc atttggcgta taaacttgtg tgacatagaa
     1621 gtcatcaaat tctagcgtga tgatacgccc ttcagaatcc atggttgttg gagcaccaat
     1681 ctctgggaag gtgatagttg gagttagatg gtttttgtag aggaagagcg taccagcata
     1741 gcccttgcgt gcaggctcaa cagatgaacg ccaggtattg gcatatccag ggaagtagct
     1801 ttccaaaatt tctagatgct ttttagtcgg tcccttatct gacaattttg tttcctgaat
     1861 ggcgataata tcagcgtctt ctgtcacaag tgtatcgatg actgcgcgtg ataatagggc
     1921 gcgaggagac tctgcagtca atgcagcgtt aagagaatca atgttccaag aaatgagttt
     1981 cataattttc cttttctagt ctgttactgt tttacattat accaaaaatc aaacttgcag
     2041 gcgaatatgg aaacttgaaa aaaattttca atttttgtgt tacagtatta aaagtatggt
     2101 acaatagtag caaagaaatc tgtgtcaagg aggttattat gaaaagaaaa ttatttgttt
     2161 ttgcctggtt agccctagtt ttggaaatgc taatctacta ctggtaccag ttgcctgctt
     2221 taaatatttt gagtgtggac ttctggatat ttttccttca atctgtcgga ttggtctggc
     2281 tcatactttc catgttcagc tccaaaggtg cttttcaaaa ggtgactaag atttccggtc
     2341 gccagagaca agtagatact tatcagatta aaacctcaca actaccagct tacttaaaat
     2401 ggttgggacg aatttgggta ttggttgtcc tgggtttgtt agggctgggg cttatcaact
     2461 cacgtgtatt tcgtgctaag gattacgctg ctgtcataag cgtcaaggat gcggatttta
     2521 aagcagattt tcctgaaaca gacatatcca aattggccct cctagatcgc gcctcagccg
     2581 aaaaaatcgg tgatacttat ctaggtacca ttgacaaggt ctctcagttt ggcatttcgg
     2641 acgattatcg ccagattacc atcggtcagc agccgttccg tgtatcgcct ttggagtata
     2701 agaatttttg gaaatggctg agcaaccatc aagatgggat tggttactat gttaaggtca
     2761 atcagacgac agggaaagca gagcttgcca agctgagcaa agccatgcac tattcagatt
     2821 ccgaattttt gctgaatgat accttacgtc atcttcgcct gcaataccct acaactattt
     2881 ttgggaaacc gtcctttgaa gtggatgacg agggcaatcc ttactatatt gcaacgattt
     2941 acgagccaaa atttggactt tcatcaaatg atccgattgg tgctattgta ttggatgcag
     3001 taacagggga aagtaagaag tatagtctgg aagatattcc agagtgggta gaccgtgttt
     3061 attcggcaaa caatgttatc agccgtgtag atgaccacta tacttatcaa aatggtttct
     3121 ggaataccat tttcagtcaa actggtgtaa aaaatacaac agacagctat aattatattt
     3181 ctatcggctc agatatttat ctctacacag gtatcacctc agcaactgct gattcatcca
     3241 accttggatt cattcttgtc aatatgagaa ctcgtgaaat taccaactac aaattggctt
     3301 cggcgactga aacagcagcg caagagtccg cagaaggtga agtgcaggaa aaaggctata
     3361 aagccactgc tccaagccta gttaagttgg cagatacagc ctactattta gtatccttga
     3421 aagatgatgc cggcttggtt aaatcatacg ctcttgttga tgccgaagat tatcaacagg
     3481 ttactgttaa caacgatatt gcgctcttaa tttctcaagt cacaggaacg gatgcttcta
     3541 gcctttcagg attgacggtg actgaaaatg gagaagttgg tgaacagact gaggttatca
     3601 gtggaaaagt agaagcttta gcgagtcaaa taattggcgg tgcgacaatc tactatattg
     3661 agtctgaggg caagatttat aaagtcaaag caacggaaga tagtacagat cgattaccgt
     3721 ttatcaaagt aggagatcac tttagcggtc agttagataa gaaaaattat cttaaaaact
     3781 ttaaggttaa tccagaataa tcataagaaa gagtgaggta gaaaagcctt gctcttttgc
     3841 ttgtcatcac ccatgcgaga tatttcaact tatggtataa tggggcgttg tggttctttg
     3901 acaggaatcc gtagattgtt ctgtcgagta tccatattct tattctgaag gagaattttg
     3961 tgagtttatt tagaaaaaaa caagcagtcg gtcgccatag tcaaatgcgt cggcatttag
     4021 gcttagttga tttgatattt ttaggtatcg gttcgatggt tggaacaggt atctttacgg
     4081 taactggttt ggcagcagcc cagtatgcag ggccagctct gatcatctca attgttattg
     4141 cagcaatttc agtcggacta acagccttgt tttacgcaga atttgcctct cgtataccga
     4201 ctaacggtgg tgcctatggt tatctctact cggtttttgg tgaatttcct gcctggattg
     4261 ctggctggct gacaatcatg gaattcttga ctgctgtatc gagtgttgca tctggttggg
     4321 gagcttattt gaaaggactc ctggttaatt ttggtatcgc tatgccgaca gctctgaatg
     4381 gaacatttaa ccccgctgca ggaacctata ttgacctttt gccagttctc gtcttgattt
     4441 ttgtggtagg agtggtcttg cttaattcta aggcagcact tcgtttcaat tcagccttgg
     4501 tagttttgaa attttcagcg ttggctttat ttattttagt agggttattc tttatcaaac
     4561 cagaaaactg gtcgaacttc tctccttttg gttttggtgc catttatggt ggacaggcag
     4621 gaattatggc gggagcgtct ctcatgttct ttgccttcct gggatttgag tctatttcat
     4681 tagcaattga tgaggtgaaa aaacctgaga agaatgtacc aaaaggaatc gtgttgtctc
     4741 tattcattgt aacaattctt tatattgtag tgacattagt attgactggt atggttcact
     4801 atactaagtt gaatgtggca gatgcggttg cctttgcact tcgagaagtt ggattggatt
     4861 gggcagcgag ttatatttct attgttgcaa tcctaacatt gattacagta tgtatttcca
     4921 tgacctacgc cttgtcgaga atggtctatt ccatcagtcg tgatggtttg ctaccgaaat
     4981 cattgagccg attgacacaa acaagcaagg ttcctaaaaa tgcgaccatt cttgtgggga
     5041 tttttgcagc tatttgtgca ggtattttcc cactagcaag tattgcttct ttcctcaata
     5101 tctgtacctt agcttatttg atcatgctgg cgttgggtat tattcgtctg cgtcaggttg
     5161 agggcttgcc aaaagcagga caattcaaaa cgccatttgt accggttttg ccaatccttt
     5221 ccatcattat ctgtctatcc tttatgtttc aatacagctt tgatacttgg ctagcctttg
     5281 gagtggcact catcgtagga agtttgattt atctattcta tggctatcgt cattcggaag
     5341 tgaaataggt tgcctccctt cgtaatttga agggattttt tctacaattt tatatatttg
     5401 tggtgcattt ttaaataaag tagtataata tatgtaacaa aagagaaagg agttttctta
     5461 tgactaatag tgatattcga gctaaagcaa cggttattcg tgaacaaaca gatgggatga
     5521 taaccttgtt tttggcacct gttttgattt cttttctgtc aggagtggca gaatttggct
     5581 tgaaacaaat ctggggacga acgggtatcg tcttttgggg aagtaccatt gtaaaagatg
     5641 gggtaacatg gagtcacaat tatatatcgc ttgacccgtc aatcatcttt gattttattg
     5701 tccagtgttt gattgtgacg gcgtgttttc aactcataag agtcgtaaga aagcagcgag
     5761 acaaggtcag cttttcagag tgttttagtc tactggatgg gaagaatttt ttacctattc
     5821 tggtcacgac ctttttgaaa atgctcgtta tttatatagc tggtttccca gctgtcattg
     5881 ggatggcttt acttagtatt tcatttttca gtacagtttt cattgttggg gctccggttg
     5941 gctatcagcc tgatttctca ggatttttta gctcctccta ttttcaaata ggagtaatct
     6001 tagtcgtgat tggcttggtt tgtggtctat tagtagatta tggtctcagt caggttcaat
     6061 ttcttcttta tgatcatttg gaaaataata tttattcttc tccgtttaaa ttattcaaac
     6121 aaagctggca attgatgaaa ggcaataagt ggcgtcgatt catgcttgac ttgtcattta
     6181 ttggttggtt catcggtatt ttactgactt ttggtttgtt ggccttgtat gtttatcctt
     6241 attattggac ctgccaagcc ctgttttatg aggatttgat tgccaaaaat cctttgttac
     6301 tttcgagggt agattccgtt tggtcttcag aactaggata agcatagatt ttatacagct
     6361 acattgaaat aaaaatacag acagtttctg ctggatttag cgatcagcaa gattctgtct
     6421 gtatttttta tcatcactgc gatacattat tactaaagtt caagttcggt tgatggtgat
     6481 gtaaaataga gttcatatac caaccaagtg atcataccag cttggataag gaggctgata
     6541 actgagcctt ccacaccaaa tgcaccacct gacaaccagt ctggaccaga ggtttctact
     6601 gcgataaagg cctggccagc ttgtgtccca ctcactggaa aggcaaagac atttccttgg
     6661 aagcagttcc atgctgcgtg gataccactg atgacccaga gattgccagt ttttaacatc
     6721 actaagcagg ctaaaatggc aaagagtgtc aggtcgagaa ggggaatgag ggaaatcccg
     6781 tcgttaccaa gatggagaaa ggtaaaaaag agggaggaaa caaggatacc gacagggata
     6841 ttgtgcttgg cagctaggga tgaaaacatc cagcctctag tcaataattc ctctgttgtg
     6901 ccttgaatgg accaagcaag tacgaggata agaaattctc ctactaaatt cgctgagaat
     6961 tgaaaactag tcacttgaat agccccaaat ccccacatga gtagaacgca ggttatcaac
     7021 atggctgcac caattcccca tccaagtaag aagtctttca aagctccttt ttttcgtatt
     7081 ccaagcccaa gccaaggact tttttctaca aatcttgccc agagtatgat ggcaagactg
     7141 atgaaggcaa aggccaataa ttcaagactg agtgtcacaa aggcattatc tatgaaaatg
     7201 aaaaataagg gcataaaggc aaagtaacca actgtttcag ctactgccat caagaccagt
     7261 gctgtgatag gcgataggat aaaattgagg ttaaagcgtg atttggcttt ttctgaaatg
     7321 aatgctgttt tcatattttt ctcttagttt gtgtttagta ccagtctatc atattttcct
     7381 atggaaaact agacagaatt ttgataagcg tgatataatg atacaaaagt atagaaggag
     7441 atacatcatg caattacagg attggctatc agattttcaa tttggagaac atcagttggt
     7501 ggggcctttt ttctatggaa cgcctttggc tcttcgcttt gagattggtc ctgcggatga
     7561 agctgagacg cttcccagaa aagtctattt ggatagggct tatgcgcgtg cggttgaact
     7621 tttggagcag gctagttcag catacgacta tgtgattctc tcgctacttc gtcaggaaga
     7681 tagggacatc gacacctacc tctggcattt ttcatcgaaa tttaacttcg acaaggtccc
     7741 tgagcctgag ttgatagaag tggaggattg gacgggagaa gtgctggtct ttgaacgcta
     7801 tctttttccg gtcgctgacc aagatttgaa agctctcttg cgggagatta tcaaggctga
     7861 tcatggtggc tttaactacc tatccagctc cgtcctcttt ttgtcaagca aggacaaggt
     7921 catttatcat tgctatgatg atagaggagt ggatattgct gtggtggatg atgacaagcg
     7981 tcgtcagctc tttacagatt gctatgacct tctttttgac tatgatatgg aggagatgga
     8041 gaggaggatg gattttaaaa actaatataa aaatgcccat gatatactac gtataccatg
     8101 ggtttgactt tcagtcaaac cctaacaaca acagtcctat cacaaaataa gattaggaaa
     8161 ctgaatggtg tgtttagtat aataacgtgg gttatttttt cagccaacac tccttttgta
     8221 ctaatacaaa tgtgttagga aaagctagga gatcttatgg caaagtttga tattagtaca
     8281 atcgaagaca agattcagca gttattggaa gttggctttg accaagcttc ttttatctat
     8341 gaattcttgt ctttttatga tattccaaaa gcgacaatca ctcgcatccg taaagataaa
     8401 agtggagaaa ttaagaacaa attgtattac aagacggttc ctactgataa gtcggttgtg
     8461 gcaggtgttg ctgagattga agtggtaatt aaggataaaa agtcccaact tagaataaga
     8521 tatttcataa attataaagt gtgtgaggtt gaaaatacgt aatatgaata ggcagaaaag
     8581 gatagcaaga ggttttaata gtgggaaact caatattaaa taaagcaaaa tacagtggga
     8641 ataatacaga tgaatggtat acagattata aaaccgtaga aagtgaagta caacattatg
     8701 aatctcaatt cattggaaaa aaagtacttt gtaattgtga caacccatat gattccgctt
     8761 ttgcaaaata ttttctgaaa aatttcaatc gattcaactt aaaaaaactg gtatgtattt
     8821 catatgcaaa ctcggagatt cattcaagtg aagatggcag gggtcttatt ctggagattg
     8881 acgaaatgtc acctgctatc attgattgtt tagatgaaaa caagctcttt gacatgctcg
     8941 taaatgatag aaagcttcga aaactaactg gtgacggaga ttttagaagc ccagaatcta
     9001 taaagtattt aatcgattct gatattgtag tgacaaatcc acctttttct aaattttcag
     9061 aattattctc attgctaact aagtatcata agaaatatct cttgattagc aaccaaaatg
     9121 caataacata caaagaaatt tttccttata taaagaagaa tgaagctcgt gtaggctacc
     9181 attttggaga tatgtcattt aaggttccag atagtactga accaagaaaa acaaggtttt
     9241 gggtggacga atttggtcaa aaatggagaa gtttaggaaa tgcaatgtgg cttacaaatt
     9301 tagaggttcc cactaatagc aaaaagaagc ttgttttgac tcacaaattc atagaaggta
     9361 attatccgaa gtatgataat tttgatgcaa ttcacgttta cagagtttca gaaataccaa
     9421 tggattatta tggaataatg ggtgtgccac ttacatattt gaaataccat aatgatgaaa
     9481 tatttgaaat tgttggagag gcaaatcatg gttctgataa tgagtatgat ctttttaaac
     9541 caaaaataaa tggtaaagaa atgtttaagc gaatattgat aaaaagacga gagagtgata
     9601 aagaaatgga atttagaata cttgatttat tttgtggtgc aggaggtatg tcgtatggaa
     9661 tgcataaaaa tcctcatttt gtaacaaaag ttgcattaga tgttaacgaa aaggtcgcac
     9721 agacgttcag aaaaaatatc ccaggctcag aattgattat aggagatata aaggacaaag
     9781 agataaagaa aaaaataata gatctttcga aaaaaaataa agtaaatatg attattggtg
     9841 gaccaccatg tcaagggttc tcgttaaaag gtaagaagtt agggttagag gaccctagga
     9901 attttttatt tatagaattt cttcatttag ttaaggtgtt gcaaccatta gtttttgtaa
     9961 tagaaaatgt aaaaaatttg atgtcgacat caaacggttg gtttaaagaa caaattataa
    10021 atgagataaa gaaactaggt tatgaagtta gtgtaggcat acttagagca agtgattacg
    10081 gtgttccaca aaatagagag agggtcattt tcttatgtag taaaaaaaat gcaatttcgt
    10141 taccagagcc aacagtcaaa agcttaacaa cagttcgaga tgctattgag gatttagcgt
    10201 atttgaattc aaatgagggt gattttgaac agagttatat cacagaagta agaacagaat
    10261 atcaaaagct tatgaggaaa gatagtgtga aactatataa ccatagagcc tccaatcatt
    10321 ctgaaattgc aattcataaa cttagcatga ttccaccaga aaaaggtaag gaatatcttc
    10381 caaaaaaact tttaggaaaa caaaaatata aatcaacgtg gggtagattg aagtgggatg
    10441 agccatcccc tactatagat acaagatttg atgcagcatc aaatggtaca aacaatcatc
    10501 catttttaca tcgttctatt acaccgagag aggccgcacg aattcagtcg tttgatgata
    10561 gatttatttt ctatggtagt aaggttgata ttagaacaca aattggtaat gcagtgccac
    10621 cgcttatggc gaaggctatt gctgatcaga tttatgaaaa ttttgtcaat aatgagggtg
    10681 aggtaattga aaatgaataa tcaaatggct tatttagtag gtatgatatt aggaaatgga
    10741 gaagtacaaa gggataccaa ttacaccaca gttacgatag agatacccca taaaaattta
    10801 cgagatgatg aagggttaga agtttcagta tatgtaaaaa gtagtttagc tgatattaga
    10861 agtattattg agccgctgtt aggacattca ctgcctattt cacaaacaaa gaatgtaaca
    10921 agggtgtctt ttacaaagtc taatgaagat tatactatga gagagattct cagatttatt
    10981 ggaaatggtg ttcaccattc aactatggta atgaatggtg aattatttaa tatgactatt
    11041 gatgagaaga aggaattgct cagaggggta gcagacgtga ctggctacat taggaaaagt
    11101 aatctggctt ttggtcaaga tggatgtcat agagtgtaca ttgagattcc aggtaactgg
    11161 caatttgtta tagatatagc taatatgttg aaaacattag atatacccgt tcaaacaata
    11221 gattttggtc atcctaactt cagagattct aatttaaaaa aatataagca aggaaaaacg
    11281 aaatattgga aaaaggaaca ccaagttaaa atatgggcaa atgagtttct acctatagga
    11341 tttaatgttg ttcacaagca aagggcatta gaacgatatg cagaagaatt acttgattat
    11401 ttagatgaaa ataaaaccca tcaattctat tgggagaaag ctgttaggtt aagaagcaag
    11461 ccgattcacc caatggaaaa tgatgatagt ttacccgaaa aaataagagg aaagcatttt
    11521 gattcatgga ctcaattagc aaaagagtta ggatatggcg aataaggtaa gaagtgaatt
    11581 tgagttatac ccaggtatgg tcaaatggtt agatacatac cttagggaaa agtttaaaaa
    11641 caagaggtgt gaagtatttg tattagattg tcactccgta tatttagatt caattttaaa
    11701 taaatatgat gtaatacaat attttccaca agttgttgga ttgaaaattg aaattgatgt
    11761 tttggggatt gtaagatgga aagatagagc tgaaatctat tttgttgaag cgaaaaaggc
    11821 agcgttaact cttcaaaatt taggacaatt attgatatat tgtaaacttt gtaatcccga
    11881 agaagcatat ttattatcat ctgatgggtt agggagccta caaaaagttt taatcaattt
    11941 aaaaagagaa gatttgcttg attatgggag tggaaaacga ataaaaaaaa ttaatgtagc
    12001 cagatgggat atttcgaagg atggagtaga taatcattct atcataccta aaatatagag
    12061 ttttgtggtt taaaaaggga ttgcttgaat tagaagatgg gcacacttaa tgctgtaaag
    12121 caggatgcct tctacgataa acgcgttcaa ctggagacta tttctccaac cggaaaaaaa
    12181 gtttccgtta ctgaatggtt tgtggtagaa ttagaacaaa ttgaaaaaaa aataaatgag
    12241 ctttttaaac aactaaatct atgacagatt atcagctaaa ccaaaggaga agtatatggg
    12301 tgcatttcta ttttttacat ttgcgatttg ttatctggta ggcattatcg ctataacgat
    12361 tggtctcaga cgtaggaagt aggaggaaag acaaatggaa gaactcttta tgaaactctt
    12421 gatttggttt ttaatcttgc tttgggcctc acctgtaatt attgtcgcat tggcaggtgg
    12481 ttttgtcatt ttaagcctat tgtttggcag aaggaaataa tgatattgaa gcattgcaaa
    12541 agaatggaac ctatcgtaaa atggtagtat atttcagata ttcaggaggg gcttgttatg
    12601 ccttaccgta aattaacatc aagcgatcgg acctttatca aagggcagac ggatcgcttg
    12661 atgaatcaga tgaatagcaa tgcggaatac ttagcgactg tccagactta tgaggcggcc
    12721 aaggcccgca tgaaccaagc ctatctggca atggaactgg aagacgaccc agagaaaaag
    12781 gtacgactgg caaaattggt tgaaacctat gctgcacaag cccaggctat attggacgag
    12841 tgggaggaga agaacagaca tgcagagaaa gcggcaagaa atatcaagtt gatcttgtgg
    12901 ctgaccgtac tgttcaccct tagctttgtt tttccagtca atatcatttt agccattctt
    12961 tttgccgttt ggttttatcg gaattacctt cgttctagta aattcgaccg agtgactaag
    13021 accgccgcaa ttagccagtc tttgacagaa gaggaaaggt ttgaagaatg gctgacagaa
    13081 aagattgtca cacttaacaa agacaagcgc cagtggacag aggatgtact tgcaaaatat
    13141 gacagtttgg atgaaatagc agcaggtatt ggtaaaattg acgagataga taaagaagct
    13201 ggtaagaaaa ttctccatcg ttatcaagca atcttagctg atattgaaaa attaccagat
    13261 tctgaccaga aaacctatta tttagatttt catcgggaga tcattgccga cttggaagat
    13321 ctattccaac aactccattt tggataagaa aaaccggtaa cagtacaagg ctgttgccgg
    13381 ttttgttatt cgtcaatgga gaagactaag accatgattt gaataaaggt aaagcccagg
    13441 atgaaaggca gggcagccca agaaatgact tcaatcattt cactgatgac gaggcttggt
    13501 ctggtaaaga tatcccatga attgagccgt gcatagcgtc caatgtgaat ggcaaagctg
    13561 gatagcaggg aaagtccacc aatcagaaac agcctgatcc agtaggactt gatcgaaaag
    13621 gcagtgaaaa tcaaccgcag gctttccacg ccagtcatta ctccaaaaat gatacttggg
    13681 acatagagca tgaagagaat catgctttca cgttgccaaa gaactgtgtt ggcgaagtgc
    13741 atgtggacga tgtccgtcac catgtaaaag gtgttggggt agaaaaagag ccagagaagg
    13801 ccagcaatga ccattatgac cttggactta ctgtggttgg tgaggatagc aaaatcaagt
    13861 gctaccaaag ccaaaaacat attccaagtc aagtcaggtg ctgtgacacc gtaacgcttt
    13921 agaccgacag cgatgatgag gaaaaagaga tgaataaaaa catttttctt tgtaaacatg
    13981 gcaaacctct ttcaatgaaa tataaatgct agtatatcac attctcatgg aaaataggta
    14041 tttgatatcg aactgtcagg acttgtttaa gcttggataa aaaaagaaac agcaacctgt
    14101 ttctttagag tttattcatc cactgcaaaa accagcacca taatttgtag gagggtaaat
    14161 ccgaggataa aggggaaggt ttcccaagat actgcagaga gcatgctagt aaagactgtc
    14221 acaggtcgga taaaaatatc ccatgaccaa atattggcat agcgtccgat gtaaatggca
    14281 tagctagaga aaagagctag actactgatg attaaaaggc gtagaccgta aacgttaata
    14341 ttgtatccct taaaaattgc ctctaaactt tccacaccgc ccataattcc aaatagaatg
    14401 ctagggatgt agagcatgaa aaaggagtag gctactagac tcccataagg cagcattggc
    14461 aaactgaata ttgactaatt cggtcagtac ataaaaggta tttggataga agaagagcca
    14521 gaaaggggta ataagtacct tgcttgcaaa gtgactgttc tgacgaacaa ggatggcgaa
    14581 gtcaagggca atcaaagccc aaaacatatt ccatatgagt tctgtatttt gaacatcgtt
    14641 cagaagcatt ccgacgcaaa tagcaataaa aaataaatgt attaagagat ttttaggtga
    14701 gaacatagac aaccccattc tttttcacaa ctccttctag tacaccaaat gtgagatgga
    14761 ttgtggactg gaagtcgctt tgtgatttag ctgaaaatat gataaaatag gatgttgtca
    14821 ataacagggt ttcatttgcc ctgaatttga aaggaaaaaa tatgacaaaa acaccgtttt
    14881 atatcaccac accgatttat tatccgtctg gcaagctcca tattggctcg gcctacacaa
    14941 ctattgcctg cgatgtcttg gctcgctaca agcgtctcat ggggcacgag gttttctacc
    15001 tgacagggct tgatgagcac gggcagaaga ttgaggagaa ggcaaaagag gctggtttga
    15061 cacctcaggc ctacgttgac ggcatggcgg ttggcgttaa agagctctgg aacttgctag
    15121 acatctctta cgacaaattt atccgcacga ccgacgatta ccacgaggaa gtggtggcgg
    15181 ctgtttttga aaaattgctg gcgcaggacg acatttactt gggagagtat tctggatggt
    15241 actccgtatc agacgaggaa tttttcaccg agagccaatt agaagaggtc ttccgagata
    15301 aaaacggcaa ggtaacaggt ggtatcgctc cgagcggcca cgaggttgcc tgggtgtcag
    15361 aagagtccta cttcctccgc ctcagcaagt atcaggataa attggttgag ttcttcaatg
    15421 ctcatccaga ctttatccag ccagacggcc gcctcaatga aatcatgaaa aacttcatcg
    15481 agccaggctt ggaagatttg gcagtatccc gtacctcatt tacttgggga gtacctgtgc
    15541 cgtccaatcc taaacacgtt gtctatgtct ggattgatgc cctactcaac tatgcgactg
    15601 ccttgggtta tggtcaggaa gaaacagcca actacgacaa gttctggaat ggaacagttt
    15661 accacatggt tggtaaggac attcttcgtt ttcactctat ttattggcca atcatgctca
    15721 tgatgttgga catgaagttg ccagaccgct tggttgctca tggttggttt gtcatgaaag
    15781 atggcaagat gtctaagtct aagggcaatg tggtctatcc agaaatgttg gttgagcgtt
    15841 tcggcttgga tccgctgcgt tactacctca tgcgtagtct gccagtcggc tctgacggca
    15901 cctttacgcc agaagactat gttggtcgta tcaactacga actagccaac gaccttggaa
    15961 acctgctcaa ccgtacagtt gctatgatta acaagtattt cggtggtcag gtaccgactt
    16021 ttgttgccaa cgtgacagat tttgatgcgg acttggcggc agttgtagct gaaaacttag
    16081 caagctacca caagtatatg gaagcagttg actatccacg cgctttggaa gctgtttgga
    16141 atatcatctc ccgtaccaac aagtacatcg acgaaacagc accgtgggtc ttggcaaaag
    16201 aagaggtaga tcgagacaag ttggcagcag tcatggctca cttaacagca ggtcttcgtg
    16261 tggtggctca cctcattcag ccattcatga tgacgacgtc taatgctatt atggaacagc
    16321 ttggtttggg aacagcattt gaccttgaaa atcttgactt tgcaggtctt ccagcaggtt
    16381 tgacagtggt cgcaaaaggc acgcctatct tcccacggtt ggatatggaa gaagaaatcg
    16441 cctatatcca agcccaaatg ggtggcagct ctgctatttc ccaagaggaa gaaaaagagt
    16501 ggaacccagc tgacgtagaa ctcaaaaacg aaaaagctgc gatcaagttc gaggacttcg
    16561 acaaggtgga aatccgcgtg gccgaagtca aggaagtagc caaagtagag ggctctgaca
    16621 agttgctcaa attccgcctg gacgcaggtg atggccaaga ccgccaaatc ctgtctggta
    16681 tcgccaagta ctatccaaat gagcaagagt tggtcggcaa gaaagtccaa atcgttgcca
    16741 acctcaagcc acgtaagatg atgggcttgc tcagccaggg catgatcctc tcagccgaac
    16801 acggcggcaa tttaacgctc ttaacagtcg atccatctgt gccaaacggc agtcagattg
    16861 ggtaaaaaag ttcaaacact cagttaaact gggtgttttt ttgcgaacta ataaagaaag
    16921 gaggttttat gttagtagca cttgatgaag atgggcaagt ttttaatgtc ttggaaaatc
    16981 ctgcgccgca aggtcgcttt tgctgtccag gttgtggagg actggtccga tacaaatccg
    17041 gcaaagttct gcgttcgcat tttgcccatg taaccctacg ggattgcaca tacttttccg
    17101 agaatgagtc agcccagcat ctgtccctca agtccagtct gtataagtgg ttacagggtc
    17161 aggaagaagt agagttagag gcctatcttc ctgcaaccaa gcaggtggca gatctcttgg
    17221 tcaatcagca acttgccttg gaagtccaat gttccagtct tccaatttct cgtttgcagc
    17281 tgaggacgca agcctatcat gaagctggtc ttcaggttct ctggctgttg ggaaaaggcc
    17341 tatggataaa agaaagatta agtaaattac acaagcaatt tctctctttt agtatgaaca
    17401 tgggttttca tctctgggag ttggatgatg aaagaaagca attgcgtcta cgttacctca
    17461 ttcatgaaga cttgcggggc aaggtgcatt gtctgacaaa aatatttccc tttggtcaag
    17521 ggaatttact agatatttta cggcttccct ttgccaaaca agccttatct cgtatgaatt
    17581 gtagattgga tagggattta ccagcatata ttgctcgaca actttactac aaaaccccaa
    17641 aatggttagc tctgcaggaa gaagcttatg gtcgtggaga aaatttactg accaagacag
    17701 tactagactg gtatccacac tatcgtctgc cccgctctgc tattggcttt gcccaaatca
    17761 aacaagacct gacaccgatt tatcaagtat ttgatcagtt ttacgacaaa gcaaaagata
    17821 agagaaaaca aatcttgtat ccgcctatca tttatagaaa accaatgtaa atagagatag
    17881 ctgatggagg tatatatatt acttttgaaa atatgctcaa tattttatgt tagtcatgct
    17941 actgttggtg aaggttgtag actttgttag cctagtggcg acttgcgatg gcgaatggca
    18001 aaaattgttt tccagttgaa tagtaaccaa taagccctca ctttccgttg gaaagagggg
    18061 attttttatg ttagaataaa ggatacggag gattaattat gtctaaacaa cgtcatgaaa
    18121 ttgaagaaaa ataccagtgg gacttgacca ctgttttccc aaccgatgat gcctgggagg
    18181 cagaacttgt agatttacaa gctgaaactg aaaaaacaaa agaatttgca ggtcatttgc
    18241 tggactcagc taaaagtctc ttagaaatta gcgaaacgca actcggtctc atgcgtcgca
    18301 ttgaaaaact ctatgtctat gcgtctatga aaaacgacca agacactcgc gaaggaaagt
    18361 atcaggaatt tcaagctaag gccatgggct tgtatgctgc cttttcacag gcttttgcct
    18421 tctatgagcc tgaatttatg gccattactg aagagcagct ggaggccttt aaggcagaag
    18481 agcctgctct tgttcagtac agccatcaat ttgaaaaact cttagcagct aaggatcatg
    18541 tcttgtcaca ggaagtagaa gaagtccttg cggcgaccag cgagattttt gaatcacctg
    18601 ctgaaacctt ctcagtcttg gacaatgcca gcctgctttt tccagaaatc gcagatgaag
    18661 atggtcactt ggtgcctctt tctcacggca actacatcca ctttatggag tctaaaaacc
    18721 gtgatgtccg tcaagaagca tacgaagcaa tgtacggtac ctatgagcaa ttccagcata
    18781 cttatgctaa aactcttcag tctaacgtaa aggtcaataa cctgaaagct cgtttgcgga
    18841 agtacgactc tgcccgccac gcatcacttg cggctaattt cattccggaa tccgtttacg
    18901 atacattagt ggcggctgtt aacaagcacc ttccgctcct gcaccgttat atcaagttgc
    18961 gtaagaaact cttgggtatt gaggacttga agatgtacga tatgtacaca ccattgtcag
    19021 atttcagcac caagatttct tatgaagatg cactcaagaa atgccaagaa accttggaaa
    19081 tcttcggtga ggactattca gctattgtga aggaagcctt cgaaaatcgc tggattgatg
    19141 tccatgttaa tgaaggcaaa cgctcaggag catattcagg aggtgcctac gacaccaacg
    19201 ccttcatgct tctcaactgg caggataact tggataacat gtacaccctt atccatgaaa
    19261 cggggcattc tcttcactct atgttgactc gtaagacgca gccgtatgtt tatggtcatt
    19321 attcactctt cttggctgaa attgcttcaa caaccaatga aaatctctta acagaaaaac
    19381 tcttggcaga agtagaagat gacaaggaac gctttgcgat tcttaaccat tacctagatg
    19441 gtttccgtgg tacagtcttc cgccagaccc aatttgctga gtttgaacaa gctatctaca
    19501 aggcagacca ggaaggtcag gtcttgacgg ctgatttcct caatgaattg tacggtcaga
    19561 caaacgagaa atactacgga ctttctgccg aagaaaatcc agaaatccag tttgagtggg
    19621 ctcgtattcc acatttctat tacaatttct atgtctatca gtatgcgaca ggttttgcgg
    19681 cagcatcagc tctagcaaac aagattgtca atggtagccc agaagacaaa gaaaactatc
    19741 tcaactactt aaaggctggt agctcagatt actccctcaa tgtcatcgct aaggctggcg
    19801 tagacatgac caaggaagat tacctcaacg atgccttcaa ggtatttgaa gctcgtttag
    19861 aagaattaga agctctcgtt gagaaaggtg tgcatctcta aaatgatttc ctacaaacgt
    19921 tcgattgtca ttcccagtgt gattagtctt gttttcatct tgctcggtct tggtggtttg
    19981 actagacctg aaccatctgc gggaagtgtc gtctatttga tatttttaca acctttgctg
    20041 gtttatttat atatattgag aaaacaaaag gctgttttta tcttgacaaa tcagtaccta
    20101 gaatttcaag aacacttttg gagtgaacgc cagcgccatt cgttagaaga gattgcggag
    20161 attcgataca tggtttctcc tgtctatcgt ggctatcagt cgaaacgttt gcgaatcgta
    20221 ggaaataagg gagcgctact tgcagtcgtc aatttgaata agcttgatgg tgcagatttt
    20281 aatgatattt accattttgt agagcaagta gcaccgcata taagatggga tttttcaaat
    20341 tcataatgga ggtattatgt taacggaaga acaactacag gacatttttg aactggcaga
    20401 cctcatgtca aatagtgaca gggagctatt tcttcaactt agggatgtgg tttttgctag
    20461 tgatccgaat cagattctag actctattga acgcatccta gaaccagatt cattcgatga
    20521 ttttttggac cgtgtcgggg agtctgaaaa ggaaaatctt tggttaatct tgataaaatt
    20581 actagagcat tttaattata tttgtgtgcg tgattataag gataatcttg aagattttat
    20641 ctactttttt gaccgtcttc atcaagtccg caatgcaggg atttctctca aattggattc
    20701 agatggatta aatccagctg cctctatttc agaatgggca agagtcgttg atagcaaata
    20761 tcttgatgaa aacttttgtc taggggcagt agatatagac acggatagtt actatctctt
    20821 tttcagtaag caagagactt ttgttcgact tcgagaacta gctggaaatt tagggtatcg
    20881 aattgattac gccaaaaata tgtaaagaaa aggtggggaa acctaccttt tagcgtgttg
    20941 aggaagaaaa tcttgtcggc ttatgatata atggactcta tggtcgaatc atatagtaaa
    21001 aacgcaaatc acaatatgcg ccgtccggtt gtcaaggaag aaattgtgga ttttatgcga
    21061 acacgtcagg cgcaaaatac aggttttttg aaagaactgg aagagtttgc tcgtcaagaa
    21121 aatattccag ttatccctca tgaaacggta gcttatttcc gcttgctgat gcagacactc
    21181 caacctaaac atattttaga aattggaact gctatcggct tttctacgct tgtcatggct
    21241 gacaatagcc cgcattcgaa gattacaacg attgatcgaa atgaagaaat gattggcttt
    21301 gcaaaggaaa actttgccaa atatgatcag cgccagcaga ttgaattgct ggaaggggaa
    21361 gccatggaca ttcttccgac tttaccagat gacgcatatg attttgtttt catggattct
    21421 gctaaatcaa aatatattgt atttttacca gaagtcttga aaaaggtcaa agtaggcggt
    21481 ctaatcattt tggatgacat cttccaagga ggagatgttg ccaaagacat caaggatgtc
    21541 agaagagggc agcgcactat ttataaggga ttgcaacgtt tattcgatgc gactttggat
    21601 aatccagatg tgactgctag tcttgtttcc atgagtgacg gtctccttat gttgaggaaa
    21661 aacagggaaa atgttgactt aaaacttaca gaaatttaag aagtttttaa gcttttgtgt
    21721 tataatgaaa gggttaacga aaaaaaggag agaaacttta aatgaagcaa actaaaaaaa
    21781 ttctcgcggg tgcagtaaca ctctttgctg cagtaacact cgctgcttgt tccaatgcag
    21841 ctgataaaga tatcattacg atgaaaggga acacgattac tgtgtctgag ttttatgaga
    21901 aggtaaaaac aaactctcaa gctcaacaag ttctattgtc aatgattatt agtgatgtat
    21961 ttgaagacca gtatggtgac aaagtgactg caaaagaagt cgatgaggct tatgacaaaa
    22021 tggcagagca atatggtgat tcatttgcaa cagctctttc ttcagctggt ttgactcaag
    22081 aaacttacaa agaacaaatc cgtactaata aattggttga gtatgctgta aaacaggctg
    22141 ctgaaaagga attgactgat gagaactaca aggcagctta tgatgcctat acaccagaag
    22201 tgactgcacg tatcatcaaa ttgacagacg aagctaaggc aaatgaagtt ttagcggcag
    22261 cacaagctga aggtgcagat tttgctcaat tggcgaagga caattctacg gatactgcta
    22321 caaaagacaa tggaggcgaa gtaaaattcg attcaacttc aacaactgtt cctacagaag
    22381 ttcaaaacgc ggtctttgct ttggatgcag gtcaagtagg ggcatccgtt atttcagtag
    22441 tagatatgac aacttataca actagctact atgttgtaaa attggaagcg aagtcagaaa
    22501 aatctgccaa ctgggaagac tataaagata agttgaaaga gattattttg gcgcaaaagc
    22561 aaagtgattc aacatttgtt gctactgtac tgaaagaagc gctccaaaaa gcaaacgtta
    22621 aggttaaaga cagtgctttc caaaatcttc tttcacaata tgtgacaaca gaagaaagca
    22681 gttcttcatc aacggaaagt agctcttcgt cgactgaaag ttcttcttct acaacagaat
    22741 cttctagttc ttcaggtcaa taattgacgt tttacctatt aagaatagat acttgattac
    22801 ttagttcaga aaattggcgg ttgttgcgag ccatctaggc caagtatctt gctacttaat
    22861 agaacaattg aatatgagaa cctgtattca tagtttagta cttctattta agtctagttt
    22921 ttcagctact catcgttagt tttttcaaaa tacagtcgta ttaccttaaa aactgctttg
    22981 attagcgaaa tgctatctct tatatacgag tgcttcactt gtgaacatag gttatgaaat
    23041 gagaatgaca agtcattgaa tgaaggtggt accgcggttt ttcgcccttc gtttgatttc
    23101 ttgttatttt tttgggaggt tatcatgaag caatttcaag tgaaacagcg ctttaccttt
    23161 ggtggtgaaa aatttgatat tcgtgatagt tttggggatc ttgcttatca agtggagggc
    23221 tctttcctcg aaattccaaa acgatttatc gtgaccaatt ccagaggtgg ggaagtttgt
    23281 cagattacta agaagttttt gaccttcctg ccccagttta ccattgatat ggcagatggt
    23341 cattctttct acttgcaaaa ggaatttacc tttttcaagg accgttatac tgtggaaaat
    23401 ctaggtttaa tcctagacgg aaatatctgg gatttggatt ttcgcttgaa aaggacagat
    23461 ggtatgctcg tagctgaaat ctccaaagaa ctctttcatt taacttctca ttactccgtt
    23521 actgtattgg aggactccta tgcagatttg gtcatttcct tggtggtcgc aattgactac
    23581 atcgaaatga tggaagatgc atcgaattaa tcgtgaaata atccttcagt ttaactgttt
    23641 cgttaaattg aacccgccta actatcactt atgaaaggag atgttcaatt tagataattt
    23701 tctgaattga accggcccgg aaggctcgct tctttctaat gctgacttct caaaatatct
    23761 aaacgaaagg aaagggcatc gagtttattc tgaaatgaac tcgggctacg gactttgtca
    23821 aaaagagaaa cccttcctag acgcaagcgt cttcgtcagg tttcctattt tgacggtgtc
    23881 cgcttaacgc ccttagtatc ttagttgaac tcggtctacg gactttcccc taaattatca
    23941 aatatgaaag gaaatgttta atttagataa ttttctgaat tgaacccgag ctaaaagcgt
    24001 cgagaaaaag atagaccgcc tagtgcgctg gcgcacagcg ttggtctcct attttcttct
    24061 cgctttctta acgctcttgg tatcttagtt tatgaaaaat ttatcttctg ctcaaattcg
    24121 tcaaatgtgg ttggatttct ggaaatcaaa gggtcactct gttgagcctt cagcaaatct
    24181 tgtcccagta aacgatccaa ctcttttatg gatcaactct ggtgtggcaa ctctaaaaaa
    24241 atacttcgat ggctctgtca ttccagataa cccacggatt acaaatgccc aaaaatccat
    24301 ccgtaccaac gatattgaaa acgttggtaa gacagcccgc caccacacca tgtttgaaat
    24361 gcttggtaac ttctctatcg gagattattt ccgtgatgaa gcgattgagt ggggctttga
    24421 gctcttgacc agcccagaat ggtttgcctt tccaaaagac aagctctaca tgacctacta
    24481 tccagacgat gtggattctt acaatcgctg gattgccctc ggtgttgatc caagtcatct
    24541 aattccgctt gaagataact tctgggaaat tggtgcaggt ccttctggtc cagatacgga
    24601 gattttcttc gaccgtggta ctgactttga ccctgaaaac atcggtattc gtttgctgga
    24661 agaagacatt gaaaatgacc gttacatcga gatttggaac atcgtattgt cacagtttaa
    24721 cgctgatcca gcagttccgc gttcagagta caaggaattg ccaaataaaa acattgatac
    24781 gggtgcaggt ttggagcggt tggcagctat tttccaaggg gctaagacca actttgaaac
    24841 ggatctcttc ttgccaatca ttcgtgaagt agaaaagatt tctggtaaga cctatgacca
    24901 agatggcgac aacatgagtt tcaaggttat tgcagaccac atccgtgccc tttcttttgc
    24961 tattggtgac ggtgcccttc ctggaaatga aggtcgtggt tatgtccttc gtcgtcttct
    25021 acgtcgtgct tctatgcatg gtcaacgttt gggcattaca gagccattct tgtacaaatt
    25081 ggtggagata gttggcaata ttatggaaag ctactatcca gaaatacttg aaaaacgtgc
    25141 cttcattgag aagattgtta agagtgaaga agagtcattt gctcgtacta tccatacagg
    25201 ttcacaattt gctgagcaat tgatggataa attggcagca gaaggtaagt ctgagattga
    25261 tggtcgtgac attttcaaac tctatgatac ctatggtttc caagtagaat tgacagaaga
    25321 attggctgag caccgtggaa tgacccttga tattgctggt tttgaagcgg ctatgaaaga
    25381 gcaacaggac cgtgcccgtg cctcagttgt caaaggtggt tcaatgggta tgcaaaatga
    25441 aaccctggct gctatcacag aagagtcgac ctttgtttac ggccaaacag ctcttgaagc
    25501 aagcttatct gtcattgtgg ctgataatgc gcgtacagaa gcagtctcag aaggtcaagc
    25561 cctccttgtc tttgaccaaa caccattcta cgctgaaatg ggtggtcagg ttgcagacca
    25621 tggttttgtg aaaaatgctg ctggagacat tgttgcgact gtcatcgatg tgcagaaagc
    25681 accaaatggt caaccattgc acacagttga actgtccgca agcatttcag ttggtcaaac
    25741 ctacacactt gaaatcgaaa caaaacgccg taagggtgtt gagaagaacc acacagcaac
    25801 tcacttgctc catgcagctc ttcacaatat tatcggcgag catgcaacac aggctggttc
    25861 cttgaacgag caagacttcc tccgctttga ctttacgcat tttgaggcag ttactgcgga
    25921 agaacttcgt cgtattgaag aagaagtcaa tgagcaaatt tggaatgcca ttccagttgt
    25981 aacggttgaa accgatattg acacagccaa ggaaatgggt gctatggccc tcttcggtga
    26041 aaaatacggt aaagaagtcc gcgttgttac tatcggtgac tattctgtcg agctctgtgg
    26101 tggtacccat gtaagcaaca ccgctgaaat cggtatcttc aagattttga aagaagaagg
    26161 tatcggttca ggtactcgcc gtatcattgc ggtaacaggc cgtgaagcct ttcttgccta
    26221 tcgtgaccaa gaagatgccc tcaaagaagt agcggcaact atcaagtcac cgcagatcaa
    26281 ggaagtgcca aacaaggttg aaagtcttgc acaacaagtt cgtgacctgc aaaaagaaaa
    26341 tgcagctctg aaagaaaaag cagcggcagc agctgctggt gatgtcttca aagaggtcaa
    26401 agatgctaat ggcattcgct acattgctag ccaggtccaa gtttcagatg caggtgctct
    26461 ccgtaccttc gctgacaact ggaagcaaaa agactactct gacgtcttgg tgttggttgc
    26521 cgcaatcggt gacaaggtca atgttcttgt agcaagcaag tcaaacgatg ttcatgcagg
    26581 taacctcatc aaagtccttg cgccaatcgt agcaggtcgt ggtggtggta agccagacat
    26641 ggccatggca ggtggtagcg atgcctctgc aatccaaacc ctcttgaaca gcgtagcgaa
    26701 aaacttgtaa tatagaaaat gtatatcccc ttgctagagt gactagcaag gggatatctt
    26761 tcaaaattgg aatgaggaac aataatggaa cgtgtaagtg atatttggca agagttgtat
    26821 aatcaagcaa aagtccacta tgctccgcat tatgtttcgc cttttattta ttcaaaccat
    26881 gtcgttgctg caattgaggc agaagatgga caaatttaca ccggttattg ctttgaggca
    26941 acagcaggtg tatttcatct ttgtgcagag agagccgctg cctttaatat gtttcaggat
    27001 agtgggcaga cgacgataaa acgcattatt gcttttcgag atcaagctcc ctttggagaa
    27061 ggttcaggaa tgccttgcgg agcttgtcgt gaatttttga tgcaactgtc ggctgagaat
    27121 gcacagacag aaatcatggt tgattttgac aaacgagaaa ccatcacatt aggcgaactc
    27181 atgccttact ggtggggtga agaaagaatg caagctggtg tggatcactt ggaataacaa
    27241 atgaactctt ttatcctttg ggtagaagag ttttttgtat ggcattctag tcaatttgac
    27301 aacattcata aactttttga caaaaattat tatttttttg acaaagatac ttgtcaaaaa
    27361 gaaaaagaag tgttacaatg atatcaagat aaaaatcaaa aggattcatc taatacgatg
    27421 aacagataag gagtcaccaa atgaaacaac cctttatgat tacaggaaca accgttgcgc
    27481 gtgcagtcga aatagggtcc attctgttat tggcttacat tcttctttct gatttgctgg
    27541 gatggagcga tatggataca gctctaatga ctactctaat tgcttcaatt gcttgtatcg
    27601 aagcaagttt acaaatggag aaaaaaggaa ataagtagaa ggagatagac catgaagcgg
    27661 tacatttcag tagatatggc agcgattatg attgcaggag cctgtattgt cggattattg
    27721 attggagttg ctctaggttt attgagtttg agctaggtga aatagaagga gaagaaaaat
    27781 ggaaaataaa aagaaattat acgaagtaga tgttagaagc gataaaaagt tggcagcaag
    27841 gttgtatgta actacaattt tattagtgtt tccgttcttt tggctatttg gattcatagc
    27901 ttctaaagtt gagtttcaaa atgtcatgaa tgagttgcaa tttatagaag cactatttat
    27961 ttttctattg cttattatca tgcatgaatg gattcatgga ctgtttttta aaattttttg
    28021 tcccaaaaat ccagtcaaat atggaattaa atggaaaaca gggatggctt atgcaatcag
    28081 tctcaactcc ctttataatc gtttccaaac agttgtaatt gcccttgccc ccttcgttct
    28141 gattagtttg gggttgacag catctgcaat gtttggttgg cttgataaag gggcttatca
    28201 gattctagca accatgcatt cagtagcttg tattggtgat ttctattata cctatttact
    28261 gatggcaaaa tgcaaagagg tggcggtaga agtagctgta acagaaaaga gcttgattat
    28321 ctaccaagcc tagaaaggaa aatttatgga atatgtctta aaaaatcggc tcaaggagtt
    28381 gcgggcacgg gatagcctca atcagactga gttggcaaaa ttagcagagg tttcgcgaca
    28441 gaccattagc ttgattgagc ggggggagta cacgccctcg gtggtcattg ccatgcgaat
    28501 tgctcaaatt tttaacgaaa atgtggagaa tgtttttcaa ttagtggagg tttgaaaatg
    28561 aaaaaaggat ttgtaaagaa acactggaag ttagggctat tatttatttt gggttgggcg
    28621 actggggcta cggcttcagc actaaaccgc acagacttgc caaaattagt tgacattggg
    28681 acaatcctgt ggggagtccg tctgccagct ctaggcttat tgcttgcagg tgcctatttt
    28741 gcttatactg cctctcaaac ccacaaggaa tatgagttgg tggatgagga tgaagaagat
    28801 ttgttagacc aggtttccaa taaaatgtac cgtagcctag agtatgcaat tattcttact
    28861 aactgcgtta gtgctctggt gattatgagt ctgtttgtta gtatgcagtt ggtttcggat
    28921 ggaaaaattc ctctagtgga ttctcttgtt gatgcagggt tatttgtcat tctacttatg
    28981 gcaaactata tcgtcttgaa attgattcac aagattcgga attataagct ctctatcttt
    29041 tcaacctttg aagatgtcaa ggcttatctt gactcttacg atgagggcga gaaacaggca
    29101 agctatgaaa tgtcccagtg gattgtcttc actttgaatc aacttgttct accgagtttg
    29161 tatggcgtac tattggtcat atcagccatt ctcaaagaac agcagctagt tgcctactta
    29221 gtcgttgtct ttattcatct ttacatcaat atcatgcagt atcgcatggt tcgccgttac
    29281 ttcaaataag gatttttgaa agagttttag gtgatagcta tgaaaaagga aaatctacac
    29341 attcgagcaa ttcgttattt ctatgatatt gttggtgagt tagacgaggt gtcttatgcg
    29401 accttgacca atttcggtaa caatatgtat atgctcttta tgacagtgac actggtgagc
    29461 ttcctagtta gctttgcgct gggagaagat gttatgggga tcagcctctt cttgacattg
    29521 gtatattctc aatttaaaca ggatgccatt atcaaacagt tgggtctaga taaattggtg
    29581 gttgccaagg ctgatgtgaa attggctcgg aagaaaatga tgaaacgaac tctgtttcaa
    29641 gccctacaga ttgccgtttt gagtttgctg gttagtattg gcctctggca gttacaaatt
    29701 ccacaggaaa gtggaacatc tgcagcggag tatttccagt ttgtcacgcc catgacagtt
    29761 gttcttctga ccatggtggg attccttagt ttctatattg ttaaccgtaa gaaaatcaaa
    29821 cttatttagt ttagatggag gtcaactcat gaaattcttt aagaaaattt atcttgtcct
    29881 attaatcggt cttggtctgt acgcagttga ctatattttc ggagaatggc tggctactgg
    29941 gcagattgat ttgtcaaatc tgaatatcct cttgccgatg gttttgggct tgccagctct
    30001 gctattgatc gaaaaagaaa gtaatgaaaa ctgacttagt gtatgtgaag gagattgcta
    30061 tgaatagact tggaaatgtc aaagattgga atgtggttaa aaattggaag tttctcttag
    30121 tgggactagc tgtcgttgcc cttaatgtat tgacccagat ggctatgttt accctaccaa
    30181 attttgacgg taataatctg ctgattgctg cagcgctcat attgcttgct gtattgcttg
    30241 gtcttatctt gactggtaaa ttaggtctgt ggaaaggtga gcagaagtgg gggatgggtg
    30301 cgaatgttgg ttttgtagtc cttgctttta tcgttatgtt tggtctgaaa ataattggtg
    30361 ggcaattgat tatgctggaa gagggatacg gtcagacgac tgccaatcag gaaatcatca
    30421 acaattcagg cttaccaacc ttagttttgt ttctctttgc tgtacttttt gctccagttc
    30481 ttgaagaatt aattttccgt ggcattctca tgggtaaagt ctttggtaag gattcgaatg
    30541 ttggattgtt gctatcaagt tttctgtttg gacttattca caatccgacc aatatcggat
    30601 cttgggttgt ctacggaggt atgggcctgg tcctgggact cgcctatcgt atttctggca
    30661 aatataccaa tgcacttatc ctacacagtc tgaataatct tcttggattt ttgttgatgc
    30721 tactgatgca aagtctgggc ttgatatagg agaaaaatat ggaactattt ttatggatta
    30781 tagtaggttt tctatttttc aattctctat cagataggaa aaaagtgaag cagttgcaag
    30841 ctagggtaaa aaagttgcag aaaactacaa aaggagaaaa tcagatgtcc gttttattga
    30901 aagaattggt cggaagtaag gccaaaatcc gctttgatga ggaattttct atcacttatg
    30961 aatacaccat tttggcagtt gatgaggaat gggttaaaat ttctcgtgaa ttagcgaatg
    31021 gggagattga aaccaagttg gtacgagtcg ataatattgt tgacttgagc ttttagggag
    31081 ggattatgtt aaaatttatc aaacacgtcg cattactatt tctatacttt gttgcctatc
    31141 aaattgcttc aggttttctc atggtaggac caactttaca aagcatacca gacatacctg
    31201 cccagttgat tgacagtaca atttggattt gtgcgataat tggtcttgtt ctctccattg
    31261 cgctcattat tctgttatgg aagtatatct atccacgtca ttctgttgac tatcgtgtga
    31321 cagcttcatg gttccataag attcaatggc cgatattact ctatattgca ttttttatct
    31381 tccaatttat tgtaccagtc ccagaaagtg aaaatcagaa gctggtgatt gaattcgtat
    31441 cagcttatcc cttgattgca tttagctccg tagtgatctt tgctccaatt ttagaagaat
    31501 tgattttccg tggatttttt gcgacctatt tcttccctaa aatggcagat atgaaggctg
    31561 ttggaatcta tctatttgta acggggtctt tatttagtct ggtccatatg ccagcaactc
    31621 ttcctcaatt tttgatttat ttcacaatgg gactcaatct tggttggctc tatttgatta
    31681 gacgtgatat tcgttatccg attgcgctac atatgctcaa caacggtatt tcttatttga
    31741 tgattgtatt tttagtataa aaaataagca gctcagattg aactgctttt tttgattata
    31801 aaccgtaaag ataatcatcg tcctgcatag cttccacttc accaagaaga tagccgttac
    31861 cgacttgaga gaagaagtcg tggttagatg taccggttga gataccgttc atgatgattg
    31921 ggttgacatc atctgctgaa tctgggaaga gtggatcctg acccaagttc atgagggcct
    31981 tgttggcatt gtaacgaagg aaagtcaaga cttcctcagt ccagccgact gcgtcataga
    32041 gggagcgtgt gtagccttct tcattttcgt aaagttggta gagcaggtcg tacatccagt
    32101 cacggagttt atcttgttct tcctcggaca attcattgaa accaagctgg aacttgtaac
    32161 cgatgtaggt accatgcaca gactcgtcac ggatgatcag cttgatgatt tctgcaacgt
    32221 tggccagctt gttgttacca aggtagtaga gtggcgtgaa gaaaccagag tagaagagga
    32281 aggtttctag gaatacgctg gcaactttct tctcaagtgg tgtacctgtt tcgtagattt
    32341 cattgataat ctttgccttg cgttgcaagt attcgttgct gttggtccat tcaaagatgt
    32401 cttcaatctc agacttggtg ttcaaggttg agaagataga agagtaagac ttagcatgga
    32461 ctgactccat gaattgaatg ttgttgtaaa cagcttcttc atgaggggta tgaatgtcat
    32521 tgcggagggc ctgaacccct gtttcagatt gaagggtatc caagagggtc aatccaccga
    32581 agaccttacc aaccaagtct ttttcttcag cagtcagttt acgccagtca tccaagtcgt
    32641 ttgataaagg aatacgtgta tcgagccaga attgctcggt caacttttcc caagttgact
    32701 tgtcaatcac atcctcaatg gcgttccagt ttatggcttt gtagtaggtt tccatatttc
    32761 tctctttctt ttctagaaat atctatacta ttgtatcata ttttctgcta aaaaacgccc
    32821 caaggacgtt ctttagattg gtttacgaat atcacaattt tttcggtcta gtaagctagc
    32881 caatccgctg atagcggtta gcctagatta ggtagttggc ttgccaac
//
LOCUS       DASFQS010000011        30571 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.011, whole genome shotgun sequence.
ACCESSION   DASFQS010000011 DASFQS010000000
VERSION     DASFQS010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 30571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30571
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.011"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            2..583
                     /locus_tag="U1041_000502"
     CDS             2..583
                     /locus_tag="U1041_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2812 domain-containing protein"
                     /protein_id="HEM4767630.1"
                     /translation="MFEEYQSEGYQLVKVTPWTAAYHFEKCSRPPHPVRLDFHEHIAK
                     GEYSNYLSLFEDCGWQPIQGSRRCGIHYFQQTIEASSTEIFSDTESKKAFYSRYQNYA
                     YSYFGLFLTLFFIHYQVGLQNGYTLWNPKSWYLTPGLWERTGTSFWFGFLFETPFALF
                     RSGIIPLFFLAWSIYFLHIAEKGKKEAKKLEKY"
     gene            complement(654..2822)
                     /locus_tag="U1041_000503"
     CDS             complement(654..2822)
                     /locus_tag="U1041_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM4767631.1"
                     /translation="MKKFLSFEFWQKFGKCLMVVIAVMPAAGLMVSIGNSIPLISPES
                     ELLIRIGNIIAQIGWGIIGNLHLLFALAIGGSWAKEKAGGAFSAGLAFILINLITGHF
                     FGVTTDMLADATATVSTVFGTQIPVSGYFVNILGQPALNMGVFVGIIAGFVGATAYNK
                     YYNYRKLPDVLTFFNGKRFVPFVVIYRSVLVALGLAIFWPLVQTGINSFGKWIATSQD
                     TAPIVAPFVYGTLERLLLPFGLHHMLTIPMNYTSLGGTYDILTGAQAGTQVFGQDPLW
                     LAWITDLINLKDAGDMAQYNDLLANVTPARFKVGQMIGSSGILMGLTLAMYRNVDEDK
                     KKKYRGMFLSSAAAVFLTGVTEPIEFMFMFAAMPLYVVYAFVQGAAFAMADIVNLRMH
                     SFGNIEFLTRTPMAIKAGIGMDVVNFIWVTALFAVAMYFIANFMIQKFNLATAGRNGN
                     YDTETTDVVSNSNVDTADANSQVVQIINLLGGRDNIADVDACMTRLRVSVKDVAQVGD
                     ENAWKQAGAMGLIIKDSGVQAVYGPKADVLKSDIQDLLESGVAIPRTEIVATETVVEE
                     AQFKGVAEAVYAVAEGQAIAITEVKDPVFSQKMMGDGYAVEPSSGNVYAPVSGIVTSV
                     FPTKHAVGILSDKGVEVLVHVGLDTVALNGAPFSAKVTDGQRVEAGDLLLVADLDAIR
                     SAGRETTIVVAFTNTAEIKSVSLGNLGQVSQDSQVATVEL"
     gene            complement(2859..3650)
                     /locus_tag="U1041_000504"
     CDS             complement(2859..3650)
                     /locus_tag="U1041_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEM4767632.1"
                     /translation="MKLLTVNVHAWLEENQDQKLDILAQTIAQKQYDVIALQEVNQLM
                     TSPLVTKDLRQDNYGLVLLERLKNLGVTDYSYFWSNSHIGYDKYDEGIAFLTKLPVYE
                     VDAFYCSQNKDLTSILSRKIIGLTVLYEKELIDIYSCHINLPDSKEENQLENIRSIVE
                     RTSSDRLKILMGDFNTDALSNPQAYQAIKDLGLYDSYDLAEEKDRGITVEKAIDGWAG
                     HSQEKRLDYVFLNQKRQVQSSRVIFNGDNLPIISDHFGVEVNICI"
     gene            3846..4553
                     /locus_tag="U1041_000505"
     CDS             3846..4553
                     /locus_tag="U1041_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4767633.1"
                     /translation="MSKYKKVYADIKEKIEQNIWQANQEMPTENELMEIYSYSKDTIR
                     KALSLLEMDGYIQKRQGRNSIILDHNLVRKPFVSELKTVSELNRSAHHQVQTELTNLY
                     IVQGQPEVMKELEVDEKTDLYRVSRVRTIDGERLEYEISYFDRRIVPYLSKEVAESSI
                     YQYLEEELGLEISHSRREISFRFANEEEKSLLDLSGYDMVVSVTSTTYLADGRPFQYG
                     TITYRPDKVTFVSMAKR"
     gene            complement(4610..6874)
                     /gene="glgP"
                     /locus_tag="U1041_000506"
     CDS             complement(4610..6874)
                     /gene="glgP"
                     /locus_tag="U1041_000506"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002992581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HEM4767634.1"
                     /translation="MTKFTTFAETNTSKKLADLTNEEIYLQLLNYVKEAAASKPKNTG
                     KRKVYYISAEFLIGKLLSNNLINLGVYKDVQAELAAAGKSLAQIEDVEPEPSLGNGGL
                     GRLASCFVDSMSTLAINGEGVGLNYHCGLFRQVFKKNEQEAEPNFWIENDSWLIPTTI
                     SYDVPFKNFTLKSKLDRLDILGYKKETKNYLNLFDIESVNYDLITDGISFDKTDIKEN
                     LTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLLIDEAIERGSNLHDLADYAYVQINDT
                     HPSMVIPELIRLLTEKHGIEFAEAVAIVKNMTGYTNHTILAEALEKWPLEFLEEVVPH
                     LVDIIKELDALIRAEIKDPAVQIIDESGRVHMAHMDIHFSNSVNGVAALHTEILKNSE
                     LKAFYELYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLLAFA
                     DDKEVHAKLAEIKFNNKLALKRYLKDNKGIELDENSIIDTQIKRFHEYKRQQMNALYV
                     IHKYLEIKNGNLPKRKITVIFGGKAAPAYVIAQDIIHLILCLSELINNDPEVSKYLNV
                     HLVENYNVTVAEKLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIA
                     ELAGMDNIYTFGKDSDTIIDLYDKVGYVSADYYNGDANIKRAVDFIVSDEVKALGNEE
                     RLGRLHHELISKDWFMTLIDLAEYIEVKEQVFADYEDQESWNKKVVHNIAKAGFFSSD
                     RTIEQYNEDIWHSK"
     gene            complement(6867..8375)
                     /gene="malQ"
                     /locus_tag="U1041_000507"
     CDS             complement(6867..8375)
                     /gene="malQ"
                     /locus_tag="U1041_000507"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019312918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEM4767635.1"
                     /translation="MTNRTSGILMHITSLPGKFGIGTFGQSAYDFVDFLVETKQTYWQ
                     ILPLTTTSYGDSPYQSFSAIAGNTHLIDFDLLVEDGLLATEDFQDVNFGDNPEKVDYA
                     LIYQVRRPILEKAVQAFLQDDKKKAAFLEFEKANSSWLTDYAEFMAIKEYFDNKALQE
                     WEDKKVVARNEEALDKYRLELANQIDYYKVTQYFFFSQWKQLKEYANKHHIKIIGDMP
                     IYVSADSVEVWTKPQLFKLDSERKPLYVAGVPADNFSADGQLWGNPIYDWPEHEKTGY
                     NWWIYRIHESFKLYDVLRIDHFKGFSDFWQVDGKAEVAKVGTWEPGPGYNLFKAIKET
                     LGDLPIIAEDLGNIDAKARKLLADCGYPGMKILEFGFFDVTGKSIDAPHRCIPNSVAY
                     TGTHDNEVVNGWYNNLDPEQQEYVDAYSNRKPIEKVSQAMLRMLFATVSDTAIATMQD
                     VLDLGEESRMNMPSTIGGNWEWRMKAEDLTQERKDFLTKMTLLYQRGNENHD"
     gene            complement(8559..10658)
                     /locus_tag="U1041_000508"
     CDS             complement(8559..10658)
                     /locus_tag="U1041_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM4767636.1"
                     /translation="MHNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEF
                     AMYRQTGRLPQTEEVAQIQAKGQIKSDGILAKLGRNLTQDAREGKLDPVIGRNKEIQE
                     TSEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
                     GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPAL
                     SRGELTVIGATTQDEYRNTIHKNAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHH
                     NIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAAQHPVTDIQTLEAEMAE
                     AKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKMVATVNDVAQAVERMTGIP
                     VSQMGASDIERLKELKNRLAAKVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVG
                     PTGVGKTELAKQLALDLFGNKDAIIRLDMSEYSDRTAVSKLIGTTAGYVGYDDNSHTL
                     TERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTIIIATSNA
                     GFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKEDLKAIVELLLSQVNN
                     TLAKKGIQLTVTETAKEFLMEEGYDKAMGARPLRRVIENQIRDKVTDYYLDHVDVKYL
                     EADVVDGSIQIKEQSFA"
     gene            complement(11065..11475)
                     /locus_tag="U1041_000509"
     CDS             complement(11065..11475)
                     /locus_tag="U1041_000509"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016502986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEM4767637.1"
                     /translation="MIQPIMKDIFFLQQKSEPATQLDVQVGQDLQDTLVVNAHACVGM
                     AANMIGVKKRIIIVNMGFTNLVMYNPVLISKAKPYQTEEGCLSLEGTRPTTRYQEIEV
                     EFFDASWKKQSLKLTDFQAQIVQHELDHLEGIII"
     gene            complement(11505..12677)
                     /locus_tag="U1041_000510"
     CDS             complement(11505..12677)
                     /locus_tag="U1041_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan bridge formation glycyltransferase
                     FemA/FemB family protein"
                     /protein_id="HEM4767638.1"
                     /translation="MTFCQITKEEFLKHCEQVNEKSFFQSVEMAGLLSKRGYDVRYAG
                     FKNSQSEIVISTLLFCKKMAGGLYMELNSGPLVTDDAYLEEFYQSLKNYAKREGVLEL
                     VVKPSQAYQLFDSVGNPISEANTQLIEKMVQVGFKHDGLQTGYPNGEPVWHYVKDLQG
                     YSTTSLLQSYNKNSKRNIKNSESYGIRIRSINHKELSAFKKIIEETGARQGFEDRDSG
                     YYNSLFESFGTQADFLVAELDPKASLKQIEKEIETSARNSKQYAQQVQKLLKKQEVVQ
                     NILNQTQTAPIFLACALIIYDVNEATYLFGGSYPEFQSLSAPFLLQYEAMQRAIKRNL
                     KRYNFLGIQGIFDNSDGVLRFKQNFNGYILRKAGTFRYYPHPIKHKIIQIIKKIVK"
     gene            complement(12677..13903)
                     /locus_tag="U1041_000511"
     CDS             complement(12677..13903)
                     /locus_tag="U1041_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyltransferase"
                     /protein_id="HEM4767639.1"
                     /translation="MFYTYKIGISAEEHDSFVKQSPQANLLQSSQWATVKSEWRNERL
                     GFFKDGKLVAVASLLIRRLIVPFGFTMIYIPRGPVMDYEDAELVSFVFKSIKEFALRE
                     RSVVIKFDPFIRLSSKTITGDREEELNVLAVKDRIVDLGGIWSGRVQTMSATIQPTCH
                     AVLYSESFSEESLNKRVRQNIRSARNKGIEIRIGREELLRDFSELLKKTEERKSIRLR
                     GREYYQKILNAYPENSYIVVAYLDLAKRYEQLSYLEEKLVKESMTFTSTTRQSKIENY
                     KKETRRINTELEMINSLIRNGSKLVPLAGTLTIDFAGTSENIYAGMDEKFKHYQPALL
                     TWVETAKYAFERGVKWQNLGGIEPTLDGGLYHFKSHLNPVVEEYIGEFDLIVSPILYK
                     IFQVLLEIRKKLRKKK"
     gene            complement(14117..14836)
                     /locus_tag="U1041_000512"
     CDS             complement(14117..14836)
                     /locus_tag="U1041_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4767640.1"
                     /translation="MKTVKEMSQLSGISVRTLHYYDEINLLTPSFIAENGYRYYDNEA
                     FEKLQEILLFRELEFPLKEIKKIVGNAAYDRESALKDQIRLLELKKKHLEKVIKHAKS
                     LQQKGENYMNFEVFDKSDLLAFQEEAKERWGNTAAFQEFSAKTNQEGFAQISAEMSGI
                     MMEFGKMKNLSADDSKVQKQVEVLKAYISENFYNCTNEILASLGQMYIADNRFTQFID
                     QVGGEGTASFVSQAIAIYCGK"
     gene            complement(14900..15340)
                     /locus_tag="U1041_000513"
     CDS             complement(14900..15340)
                     /locus_tag="U1041_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767641.1"
                     /translation="MAVWFQDVVDSLQMISQGDRYYYDSYLDELVYLSVEETGLESCE
                     GLEEEIEEDVTGRFVRLPTYYDFNPYTFMELYISDLTDGDLSGRLSRAIRGRGAFRRF
                     KNELERCDRLEEWYAFETQCYKELVLDWCQENEIAIVENRLKKM"
     gene            complement(15344..16996)
                     /locus_tag="U1041_000514"
     CDS             complement(15344..16996)
                     /locus_tag="U1041_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767642.1"
                     /translation="MKNWMDYFKPHIVDRGCSLFLDDAVQGLQEVGEGYCAHVIGSQV
                     YEVAIDFEYGQLVSMWCECPYAQEMNHCKHMAAVLFAISELEGQPAVEGKDVSLAQLL
                     DKLTVEQLRAFVLELAQEDRELANRIQLRFSAQLTSQQVENVKKAIRDLGLPFEDRRT
                     GFIEYRQTRDYERAVEKSMVQYLQPLLDRCEYECFLAISDAFYHQICQQELDDSNGTI
                     GSLLYRLAGYWQHLLTVAPDKIVQELLDWCLEKLSGYEVAEDLLMEFVETEFQEEHFL
                     EQKLTYFQAVLQVIEEGDKSSWSWKFRRDRFALLCYRLLVQLDSSEADLLTFQANHWE
                     VAGLRKLAIAQAVANQQLDRAVHLLQESKRLDAQYRGLVSDYSQQLRDIYRSQGQDDK
                     VREELLEMIFSAGDTDLDLIEELRDYVSREEWQSYLDDLLEDGRFQSQQLKLLQLADR
                     PQELLDRITASYWFLENLDRFEDYLSEKLPEQLRDAYAQALCQQMDVASSRSRYRQLA
                     GYLVKIAGLPDGKVVSTSLRTSWKVQYPRRKAMIEELDAVRW"
     gene            complement(17094..18182)
                     /locus_tag="U1041_000515"
     CDS             complement(17094..18182)
                     /locus_tag="U1041_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEM4767643.1"
                     /translation="MISGIIAEYNPFHTGHKYLLEQAEGLKIVVMSGNFMQRGEPAIV
                     DKWTRAQMALEHGADLVVEMPFLVSVQSADHFAKGAISILHRLGVEKLVFGTEEMLDY
                     QKIADIYVDKSEEMENFVKNLPDNLSYPQKTQAMWQEFAGLTFTGDTPNHILALAYAK
                     AVAGTDIQLSPVQRQGAGFHSEEVETSYASATAIRKGADHLDLVRDFLPSASLFEEAT
                     KVSWKDYFPLLRYQIATHPDLSQVFQVNEELASRIRSAIGSVATVEELVDAVATKRYT
                     KARVRRVLTYILINAVENPLPDAVHVLGFSARGQAYLKTVKERVDLVTRIGKEPWDSL
                     TQQADVVYQLGADAIAEQTYGRVPVRVE"
     gene            complement(18179..18925)
                     /locus_tag="U1041_000516"
     CDS             complement(18179..18925)
                     /locus_tag="U1041_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4767644.1"
                     /translation="MATYETFAAVYDEIMDDSLYDKWTDFSLRNLPQDTKTILELACG
                     TGIQAVRFAQKGFEVTGLDLSYEMLELAQKKAEAAGVMMELAQADMMALEGVGDFDAV
                     TCYSDSLCYMADQEAVLRVFEGVHSVLNQGGTFLFDVHSIYQMEEVFAGYSYHENYED
                     FAFVWDTYEGEHEYSIVHELTFFVKDEDSQEERFIRRDEVHEERTYPIETYVELLKEA
                     GFASVEVFADFEDEAPTETSQRWFFKAVKA"
     gene            complement(19072..19431)
                     /gene="rsfS"
                     /locus_tag="U1041_000517"
     CDS             complement(19072..19431)
                     /gene="rsfS"
                     /locus_tag="U1041_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEM4767645.1"
                     /translation="MKELDLVKVVVQAADDKRAEDLVVIDVQGVTSLTDYFVIASSMN
                     SRQLEAIAENIREKVVEVGIKSSRVEGDSNGGWVLLDLGGVVVHIFSEEMRDLYNLEK
                     LWHEGSFLEVADFLEEE"
     gene            complement(19433..19942)
                     /locus_tag="U1041_000518"
     CDS             complement(19433..19942)
                     /locus_tag="U1041_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEM4767646.1"
                     /translation="MKSALLVIDIQNLLVEEKPYAIEERLALWQDSLAQARQAGLVVI
                     HVRHHHQELVKGTADWEIHSIVAPLASEKIFDKTFNSAFKETGLHAYLQEKEIEQLII
                     MGMATNFCIDTTVKVAFEYGYQLAIIKDGTTTGYSGKLDAKDLIDHYQNIWSWNFAQV
                     DKLENIIRG"
     gene            complement(19939..20394)
                     /locus_tag="U1041_000519"
     CDS             complement(19939..20394)
                     /locus_tag="U1041_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767647.1"
                     /translation="MITLKPVDEISYQAVLDLTVAEADMGFVAPNVRSLADAWLYREN
                     GDVFPYAIWADEQVVGFALIDIDEDIQQYMLWRFMIGQEFQGKGYGQAALEVVIAMAQ
                     SHPVCDHLIAAYVKGNQKMAYLLEKNDFVLDSEEERELVFRLETPGVKL"
     gene            complement(20397..20984)
                     /gene="yqeK"
                     /locus_tag="U1041_000520"
     CDS             complement(20397..20984)
                     /gene="yqeK"
                     /locus_tag="U1041_000520"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HEM4767648.1"
                     /translation="MIAADLTFDRQALLEKIRAVMKPARFQHVLGVEQAAIALADQYD
                     CDPKKASLAALLHDYAKEVEDQVFLDLIAKYDLDKDLLNWDNNIWHGVVGAYKIAEDF
                     GLEDEEIFQAIQRHTVGAGQMTLLDKVLYVADYIEPNRDFPGVDEARRIARESLDKAV
                     AYETAQTISYLAKKGIPIYPQTLETYNGYVAVLKE"
     gene            complement(20981..21613)
                     /locus_tag="U1041_000521"
     CDS             complement(20981..21613)
                     /locus_tag="U1041_000521"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEM4767649.1"
                     /translation="MAIELLTPFTKVELEVEKKETNRKQVGILGGNFNPVHNAHLIVA
                     DQVRQQLKLDEVLLMPEFIPPHVDTKETIDEYHRYSMLKMAIAGIDGLGIETVELERR
                     GVSYTYDTMKLLKEKNPDTDYYFIIGADMVDYLPKWHRIDELVQLVQFVGVQRPRYKA
                     GTSYPVIWVDVPLMDISSSMVRNFIKQGRVPNFMVPHEVLDYIEEKGLYQ"
     gene            complement(21626..21937)
                     /gene="yhbY"
                     /locus_tag="U1041_000522"
     CDS             complement(21626..21937)
                     /gene="yhbY"
                     /locus_tag="U1041_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEM4767650.1"
                     /translation="MMLTSKQRAFLNSQAHSLKPIIQIGKNGLNDQIKTSVRQALDAR
                     ELIKVTLLQNTDENIHEVAEILEEEIGVDTVQKIGRILILFKQSSKKENRKISKQVKE
                     I"
     gene            complement(22256..23362)
                     /gene="yqeH"
                     /locus_tag="U1041_000523"
     CDS             complement(22256..23362)
                     /gene="yqeH"
                     /locus_tag="U1041_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000391231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HEM4767651.1"
                     /translation="MEELFCIGCGAQIQTLDKAVAGFTPQSALEKGLETGQLYCQRCF
                     RLRHYNEISDVNISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDV
                     LLVGNKQDILPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQH
                     RKGRDVYVVGVTNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIPLDDGSYVY
                     DTPGIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQ
                     GFTAFFDNELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKEFPELVRHEFTINEKTD
                     VVFSGLGWIRVNEKAKIAAWAPKGVDVVIRKAII"
     gene            complement(23363..23902)
                     /locus_tag="U1041_000524"
     CDS             complement(23363..23902)
                     /locus_tag="U1041_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014829756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HEM4767652.1"
                     /translation="METTVSLENYMPDFALEKAYDVTVESLKKHGIKVVFVDLDNTLI
                     AWNNPDGTPEMRQWLQDLQDAGIPVVVVSNNKYERVKRAVEKFGIEFEAFALKPFTFG
                     INRALKRFDVQPHEVVMIGDQLMTDIRAAKRAGLKSVLVKPLLKTDSINTQINRWRER
                     RTMKKIIAKYGAIDYKREM"
     gene            complement(24001..24678)
                     /locus_tag="U1041_000525"
     CDS             complement(24001..24678)
                     /locus_tag="U1041_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HEM4767653.1"
                     /translation="MTIIERADNLERIILPEGYYETLAQYVRAGKTGFDSELEKLGDQ
                     GLDINVYKGSEQDREVILEDIENLPQEIREELARFAANLLNPLREQLGTVAVEVSDLA
                     LDYADRLAQSLSSSLRYHNYDSLIAIAQLKGVEPKGKDCLAFSEYRETYTLYDAKKLV
                     YKALIWRLFDDSHADYGHATTILGMDEDDSGVEEIGFAFSKYSLDIDWLLTHMIFIPK
                     DWILESK"
     gene            complement(24796..25425)
                     /locus_tag="U1041_000526"
     CDS             complement(24796..25425)
                     /locus_tag="U1041_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HEM4767654.1"
                     /translation="MIKEFCSENHVDLAKAISMGAQRIELCDNLAVGGTTPSYGVVKH
                     VCQLAHENEATVMTMIRPRGGDFCYDEAEIEMMVEDCKVAKELGSDGLVYGLLTEENW
                     LDEPALERLFAVSQDCQIVFHMAFDQIPRERQFEALDWLAEHGVTRILTRGSLTGSAL
                     NNVEWLQEIVAYAQGKIEILIGGGLTVDNVPTLLEKLAIDQVHGTRLFW"
     gene            complement(25475..26383)
                     /locus_tag="U1041_000527"
     CDS             complement(25475..26383)
                     /locus_tag="U1041_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEM4767655.1"
                     /translation="MAEKRLGTLITLVAGIAWGLSGVSGQYLMSRGVSVDMITSLRLM
                     VSGVFLLGLAYLTAREQLIKVIKSKRALLGIFVFAMLGLVLNQMAYLQAIYYTNAGTA
                     TVLQYLCPILVLAYTCLKNREKPSGIELISIILAVAGTLLIATHGKLDELAVTPIGLF
                     WGIFSAFTYALYIILPGKLIRQYGSITVIGLGMLMGGFVVTLGLQTWQHRLPIDGGSF
                     LGLLGIVGVGTIFAYTAFLKGVSMVGPVNGSLLASIEPIASVFFAVWLVNERFYPIDF
                     LGMALILGAVLLISLKDIIISEKSIG"
     gene            complement(26458..27939)
                     /gene="galT"
                     /locus_tag="U1041_000528"
     CDS             complement(26458..27939)
                     /gene="galT"
                     /locus_tag="U1041_000528"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009568750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose--hexose-1-phosphate
                     uridylyltransferase"
                     /protein_id="HEM4767656.1"
                     /translation="MMAGLVDRFVEQVIANSSFEEMDALYLRNRVLALVGDQVLTVQT
                     ELTDLIELKEELLAQAVRTGFVGELLEEQDMVGACLMDLITPSPSQVNRDFWQTYQDS
                     PEQAVADFYALSKRNDYIKVAAVAKNIYYQTPTDYGNLEITINLSKPEKDPKAIAAAR
                     LAEASNYPQCLLCMENEGYQGRINHPARANHRIIRLDLGQEQWGFQYSPYAYYNEHAI
                     FLNQEHVPMVISPRTFEQLLNLLDIFPDYFVGSNSDLPISGGSILTHNHYQGGRHSFA
                     MERAPIERQLVFDGFESVSAGLVKWPMSVIRLSSADKPALLSLAAKILEKWRSYSDDA
                     VQIKAETDGTPHHTITPIARKRGDLYELDLVLRDNQTSEEFPDGIYHPHPDVQHIKKE
                     NIGLIEVMGLAILPPRLKAELAEVEKFLLGQDSQVADYHQPWADRLKAEHPDVTEERA
                     EEIIRASVGQIFARVLEDAGVYKRTSEGQAAFLRFVEFVGLKQ"
     gene            complement(27949..29121)
                     /locus_tag="U1041_000529"
     CDS             complement(27949..29121)
                     /locus_tag="U1041_000529"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002275277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HEM4767657.1"
                     /translation="MNKEQLNQAFLDVFGQEADATFFSPGRINLIGEHTDYNGGHVFP
                     AAITLGTYGAARKRDDQLLRFYSANFEELGIIEVDLNNLVFDKADNWTNYAKGVLKFL
                     KEAGQTIDTGMEVFVYGNIPNGSGLSSSASLELLIGIIVEELYGLELTRLDLVKIGKQ
                     TENHFIGVNSGIMDQFAIGMGADQRAIYLDTNSLEYELVPLDLGDHVIVIMNTNKRRE
                     LTDSKYNERRAECEKAVEELNAVLTIQTLGELDEWTFDQYSYLIKDENRIKRARHAVL
                     ENQRTLQARKALEEGDLATFGRLVNASHVSLEHDYEVTGLELDTLAHTAWEQEGVLGA
                     RMTGAGFGGCGIAIVHKDKVDAFTENVGKTYTEVVGYEPSFYVAEIAGGSRVLSRK"
     gene            29254..30252
                     /locus_tag="U1041_000530"
     CDS             29254..30252
                     /locus_tag="U1041_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4767658.1"
                     /translation="MVTIKDIAKQAHLSSATVSRVLKGDLTLSVSQETRDRIFNLAQD
                     LGYTKHLKKQAPQQKGTIGIVQWYTESEELADLYYYSIRASIEQTASLLGYQIIRSFN
                     DLTNPLLQEVDGIIAVGKFSSGQIAELTNLSSKLIFVDSDTLTEGFSCVTTDFEHSVQ
                     TVIDHFRAQGLTDIGLLVGREETTDGHQLPTDPRLTAFRDYLDTLGILQENYIYQGKF
                     STQSGYELMSQAIEDLSDKLPSAFFMANDTLAVGALRALQERQIAVPDRVQLITFNDT
                     AITRQVYPALSSISVFTEEMGQEAMQLLDRVIASPQPHHPRKIKLGTQLVIRESSY"
BASE COUNT         8659 a         7312 c         5717 g         8883 t
ORIGIN      
        1 gattttcgaa gagtatcaat ccgaaggtta tcagcttgtc aaagtaactc cgtggacagc
       61 agcctatcat tttgaaaaat gtagtcgccc ccctcatccc gtacgccttg attttcatga
      121 acatattgca aaaggagaat attcaaatta cctctctcta tttgaagact gtggttggca
      181 acctatacaa ggtagtcgta gatgtggcat ccattatttt caacaaacaa tcgaagcttc
      241 aagcacagaa attttttctg ataccgaatc gaaaaaagca ttctattcac gctaccaaaa
      301 ttatgcctac tcctatttcg gattatttct gactttattt tttatccatt accaagttgg
      361 actccaaaat ggatacacac tttggaatcc taaatcctgg tacctaactc cagggctatg
      421 ggaacgaact ggtaccagtt tttggtttgg ttttctcttt gaaaccccat tcgcattgtt
      481 tagaagtggc attattccct tatttttcct tgcttggtct atttatttcc tccatatcgc
      541 tgaaaaaggt aaaaaagaag cgaagaaatt agaaaaatac tgatggcata ctatccaaaa
      601 gaaaaagatt gaaaagagtt gactgcaatc atcttttcaa tcttttttac tttttacaac
      661 tcaactgtcg caacttggct atcttgactg acctgcccaa gatttccaag gctgacagat
      721 ttgatttctg ctgtgtttgt gaaggcaacg acgatggttg tttcacgtcc tgctgagcga
      781 atggcatcca gatctgcgac aaggagcaag tcccctgctt caacgcgttg accatctgtt
      841 accttagctg agaatggagc accgtttagt gcaaccgtat ctaggccgac gtgcaccaag
      901 acttctacgc ccttgtcaga caaaataccg acagcgtgtt tggttgggaa gacactggtt
      961 acgatacctg aaactggtgc gtaaacattg ccggagctag gctcaactgc ataaccgtcg
     1021 cccatcattt tttgtgagaa aactggatct ttcacttctg tgatggcaat ggcttgacct
     1081 tcagcaacag cataaactgc ctcggccaca cccttgaatt gtgcttcctc aactactgtt
     1141 tcagtcgcaa caatttccgt acgaggaatg gctacgccag attctagcaa gtcttgaatg
     1201 tctgatttga gaacatctgc ttttggtccg tagactgctt gaacacctga gtctttgata
     1261 atcaagccca ttgcaccagc ctgtttccaa gcattttcat ctccaacctg tgccacatct
     1321 ttgacactaa cgcgaagacg agtcatacaa gcatccacat ctgcgatatt atcacgacca
     1381 ccaagcaagt tgatgatttg taccacttgt gaattagcat ccgctgtatc tacgtttgaa
     1441 tttgaaacca catctgttgt ttctgtatca tagttaccat tgcgtccagc tgttgctagg
     1501 ttgaattttt gaatcatgaa gttggcaatg aagtacattg caactgcaaa gagggctgtt
     1561 acccagataa agttgacaac gtccatgccg ataccagctt taatcgccat cggtgtacgt
     1621 gtaaggaatt cgatattacc aaatgagtgc atacgcaaat tgacaatatc cgccatagca
     1681 aaagcagcac cttgtacaaa cgcataaacg acatagagtg gcattgctgc aaacatgaac
     1741 ataaactcaa ttggttctgt tacacctgtc aagaagacgg ctgcagcaga tgaaaggaac
     1801 ataccacgat attttttctt cttatcctca tcaacattgc ggtacatagc aagggtcaag
     1861 cccatgagaa taccagagga accaatcatt tgacctactt taaagcgagc aggggttaca
     1921 ttggcaagaa ggtcattgta ctgagccata tcaccagcat ccttgaggtt aatcaagtct
     1981 gtaatccaag ccaaccaaag cggatcttga ccaaatactt gtgtacctgc ttgagcacct
     2041 gtcaagatgt cataggtacc accaagtgac gtatagttca tcggaatagt caacatgtga
     2101 tgaagaccaa atggaagaag caaacgttcc aaggtaccat aaacgaatgg agctacaata
     2161 ggagctgtgt cttgtgaggt tgcaatccat ttaccaaaac tgttaatacc agtttgtaca
     2221 agaggccaga agattgccaa acctagcgct acaaggacag aacgatagat gacaacaaat
     2281 ggcacaaagc gtttgccgtt aaagaaggtc aatacatctg gcaacttgcg atagttgtag
     2341 tatttgttgt aagcagtcgc accaacaaaa ccagcaataa tccctacaaa gacacccatg
     2401 ttcaaagcag gctgaccaag gatattgaca aagtagccag atactggaat ttgagttcca
     2461 aatacagtgc taacagtcgc agtcgcatct gccaacatgt cagtcgtcac accaaagaag
     2521 tgaccagtaa tcaagttaat caagataaaa gcaagacctg ccgagaaggc accgccagct
     2581 ttttccttag cccagctacc accgatagcc aaggcaaaga gcaagtgaag gtttccgata
     2641 atcccccaac cgatttgggc aatgatattc ccaatacgaa tgagcaattc tgattcagga
     2701 ctgattagtg gaatcgagtt tccgatagaa accatgagac ctgccgccgg cataacggca
     2761 atcacgacca tcaaacattt accgaatttt tgccaaaatt caaaactaag aaattttttc
     2821 atgtgtttct cctaaatttt ttcttggtca gttgaccttt agatacatat gttaacttcc
     2881 acaccaaagt ggtctgaaat aatgggaaga ttgtccccat tgaaaatcac tcgactggat
     2941 tgaacctgtc ttttctgatt taagaacaca tagtccagac gtttttcctg actatgacct
     3001 gcccatccat caatggcttt ttcaacggtg attcccctat ccttttcctc agccaaatca
     3061 taactatcat ataaacctaa gtccttgata gcttgatagg cttgtggatt tgacagggca
     3121 tccgtattga aatcacccat gaggattttc aagcgatccg aacttgtccg ttccacaatc
     3181 gagcgaatat tctccaactg attttcttct ttactgtcag gaagattgat atgacaagaa
     3241 taaatgtcaa tcaattcctt ctcatacaag accgtcaaac caatgatttt tctagacaag
     3301 attgatgtca aatctttgtt ctgactgcag tagaaggcat ccacttcata gacaggtagt
     3361 ttggtcaaga aggcaatccc ttcatcatac ttatcatagc cgatatgaga attggaccaa
     3421 aaataggaat agtctgtcac tccaagattt ttcagccttt caagcaaaac cagaccataa
     3481 ttgtcttgcc gtaaatcctt agtcaccaga ggacttgtca tcaactggtt gacttcctga
     3541 agagcgatta catcatattg cttttgggca atggtctgag caagtatgtc caacttttgg
     3601 tcttgatttt cttccaacca agcatggaca ttgactgtta ataatttcat accgctcctt
     3661 tctatttact tagtaaaacc ttttcaactt gtagccttat tataacgtaa acgttttcaa
     3721 gtgtcaatag ttttacggaa taattttaat agttttccgt aaaagtttat ctagacttag
     3781 aatactgacc tttggtaatt tttatgatat actaacggta aatagcacac taggaagtta
     3841 ccccaatgag taaatacaaa aaagtctatg ctgacatcaa ggaaaaaatt gaacaaaata
     3901 tctggcaggc caatcaagag atgcctacag aaaacgaact gatggagatt tactcctatt
     3961 ccaaggacac catccgcaag gccctatcgc tgttggagat ggatggctat atccaaaaac
     4021 gtcagggacg aaactcgatt attttggacc ataacctggt cagaaaacca tttgtgtccg
     4081 aattgaaaac cgtcagtgaa ctcaaccgct ctgcccacca tcaagtccag accgaattga
     4141 ccaacctcta tattgtccaa ggtcagccag aggtcatgaa ggaattggaa gtggatgaaa
     4201 aaacggatct gtaccgtgtc agccgcgttc ggactatcga cggtgagcga ttagagtatg
     4261 agatttccta ctttgaccgt aggattgtcc cctatctcag caaggaagtc gctgaaagct
     4321 cgatttatca gtatttggaa gaagaattag gtctagagat ttcccattct cgtcgagaaa
     4381 tttccttccg ctttgcaaac gaagaagaaa aaagcctgct agacctgtca ggctacgaca
     4441 tggtggtctc cgttaccagt accacctatt tagcagacgg ccgtcctttt cagtacggaa
     4501 ccatcaccta tcgaccagat aaggtcactt ttgtatccat ggccaaacgg taaaaactaa
     4561 acatattaaa aaagaatgtt cccactcgga aacattcttt tattttggat tatttactgt
     4621 gccagatatc ttcgttatac tgctcgattg tacggtcaga tgagaagaat cctgctttgg
     4681 cgatgttgtg aacaactttc ttgttccaag attcttgatc ttcgtagtct gcaaagactt
     4741 gctccttgac ttcaatgtat tcagccaagt caatcaaggt catgaaccag tctttcgaaa
     4801 tcaattcatg gtgcagacga ccaagacgtt cttcgttacc aagtgctttt acctcatcgc
     4861 tgacgataaa atcaactgca cgcttgatat tggcatcgcc attgtagtag tccgcagata
     4921 cgtaaccaac cttatcgtac aagtcgatga tggtatctga atctttacca aatgtataga
     4981 tgttgtccat accagccaac tcagcaatct caacgttggc accgtccatg gtaccaagtg
     5041 tcaatgcacc gttcaacatg aatttcatgt taccagtacc tgacgcttct ttagaagcca
     5101 atgagatttg ttctgaaata tctgttgcag ggatgagttt ctcagcaact gtcacattgt
     5161 agttttctac caagtgaacg ttgaggtact tgctgacttc tgggtcgttg ttgatcaact
     5221 cagacaagca gagaatcaag tgaatgatgt cttgggcaat cacgtaagct ggagctgcct
     5281 taccaccgaa gataacggtg attttacgtt ttggcagatt gccgtttttg atttcaagat
     5341 acttgtggat gacatacaag gcattcattt gttggcgttt gtactcgtgg aaacgtttga
     5401 tttgtgtatc aataatagaa ttttcatcca gctcgatacc tttattgtct ttaaggtaac
     5461 gtttgagagc caacttattg ttgaacttga tttcagccaa cttagcatgc acttccttgt
     5521 catctgcaaa ggcaagcaat ttctcaagct tagtcgcatc tgtcaaatac tcatcaccaa
     5581 tcaattcctt gatgtaatca gcaaggtctt ggttggcaaa ttccaaccaa cggcggaaag
     5641 tgataccgtt tgttttattg ttgaattttt ctgggtaaag ctcgtagaaa gctttcaatt
     5701 cagagttttt gaggatttct gtatgaagcg cagctacacc gttcactgag ttagagaagt
     5761 ggatatccat gtgagccatg tgtacacgac ctgattcatc aatgatttgg actgctgggt
     5821 ctttgatttc tgcacgaata agggcatcca attctttgat gatatcaacc aagtgcggca
     5881 ccacttcttc aaggaactca agtggccatt tttcaagtgc ttccgccaag atagtgtggt
     5941 ttgtgtaacc agtcatattc ttaacgatgg caactgcttc cgcaaattca ataccatgct
     6001 tttcagtcaa aagacggatc aactcaggaa tcaccattga agggtgagta tcgttgattt
     6061 gcacataagc gtagtcagcc aagtcatgca agtttgaacc gcgctcaatt gcttcatcaa
     6121 tcaaaagttg agcagcattt gataccatga aatattgttg gtagatacgg agcaattcac
     6181 cattcttatc agaatcatct gggtacaaga agagtgtcaa gttttcttta atatcagtct
     6241 tgtcaaatga aataccgtct gtaatcaagt catagttaac agactcaata tcaaacaaat
     6301 tgaggtagtt cttagtctct tttttatagc caagaatatc aagacgatcc aattttgatt
     6361 tcaaagtgaa gtttttgaat ggaacatcat agctgatagt tgttggaatc aaccaagaat
     6421 cattttcaat ccagaagtta ggctctgctt cttgctcatt tttcttaaat acttggcgga
     6481 aaagaccaca gtggtagttc agaccaacac cttcaccgtt gatagcaagt gttgacatag
     6541 aatcaacgaa acatgaagct agacgtccca aaccaccgtt accaagtgat ggttctggtt
     6601 caacatcttc aatctgcgcc aatgatttac cagctgctgc caattctgct tgaacgtctt
     6661 tgtacacgcc caagttaatc aagttgtttg acaagagttt accgataagg aactcagctg
     6721 agatatagta aactttacgt tttcctgtgt tttttggttt tgaagctgca gcttctttta
     6781 cgtagttcaa cagttgaaga tagatttctt catttgtcaa atcagctaat ttcttcgaag
     6841 tgtttgtttc tgcaaatgtt gtaaatttag tcatggtttt catttcctcg ttggtatagt
     6901 aatgtcattt ttgtcaagaa gtctttgcgt tcttgggtca agtcttcagc tttcatgcgc
     6961 cattcccagt ttccaccgat agttgacggc atattcattc gactttcttc acccaagtct
     7021 aggacgtctt gcatggttgc aatagctgta tcactcactg ttgcaaacag catacggagc
     7081 atagcttggc taactttttc aatcggctta cggttgctat aggcgtccac gtattcttgt
     7141 tgttctggat caagattgtt gtaccagcca ttgacaacct cattatcgtg agttccagtg
     7201 taggcaactg aatttggaat gcaacggtgt ggagcatcga tactcttacc tgttacatca
     7261 aagaaaccaa attctaagat tttcatgcct ggatagccgc aatctgcaag caatttgcga
     7321 gctttagcgt caatgtttcc aaggtcttct gcaatgattg gaaggtctcc aagtgtttct
     7381 ttgatagcct tgaagagatt gtagccagga cctggttccc aagttccaac ttttgccacc
     7441 tctgccttac catcaacttg ccagaagtct gagaaacctt tgaaatggtc aatccgaagg
     7501 acatcataaa gtttgaaact ttcatggata cgataaatcc accagttata gcctgttttt
     7561 tcatgttctg gccaatcgta aataggattt ccccataatt gaccatctgc cgagaagtta
     7621 tcagctggta cacctgctac ataaagtggc ttgcgttcac tgtccaattt gaatagttgg
     7681 ggttttgtcc acacttcaac gctatcagca gaaacataga ttggcatgtc tccgatgatt
     7741 ttgatgtggt gtttgttggc atattctttc aattgtttcc attggctgaa gaagaaatac
     7801 tgtgtgactt tgtagtagtc gatttgattt gccaattcta agcggtactt atcaagagct
     7861 tcctcgttgc gagctacaac ttttttatct tcccattctt ggagagcttt attatcaaag
     7921 tattccttga tagccatgaa ctccgcataa tctgtcaacc aagatgagtt agccttttca
     7981 aactctagaa aagcagcttt cttcttatca tcttgtaaaa atgcttgaac tgccttctcc
     8041 aaaattggtc gacgaacttg ataaataaga gcatagtcta ctttttcagg attatctcca
     8101 aaatttacat cttggaaatc ttctgttgcc aataagccat cttcaaccaa gaggtcaaag
     8161 tctatcaagt gtgtatttcc tgcaatagca gagaaagact ggtaaggaga atctccatag
     8221 cttgtagttg ttagtggtaa aatctgccag taggtttgct tggtttccac caagaaatct
     8281 acaaaatcat aggcagactg tccaaaagta ccaataccaa acttacctgg aagtgaggta
     8341 atatgcatca aaattccact ggtacgattt gtcataaaaa cgttttcctt tctgtcggtt
     8401 acgaatatag tttaacgcaa acgtttgcac ttgtcaaggg ttttataaaa aaagttttaa
     8461 tatgctctag aaagcctatt ttatagcatt tgttagcgaa taacaaaaaa gaaaaaaatc
     8521 agatatttct atccgatttt tcaaattctt cactattttt aagcaaagct ttgctctttt
     8581 atttggatgc ttccatcaac cacatccgct tccagatatt tgacatcaac atgatccaaa
     8641 tagtaatctg ttaccttgtc tcgaatctga ttttcaatca cacggcgcag aggacgggct
     8701 cccatggcct tgtcatagcc ttcttccatc aagaattctt tggcagtttc cgttaccgtt
     8761 aattggatgc ctttcttcgc cagggtatta ttgacctggg acaaaagtaa ttctacgata
     8821 gctttgagat cttctttatc caaatgcttg aactcgataa ctgcgttaaa acgattaagg
     8881 aactccggac ggaagaatgg tgcgatgcgg tccatgatgt cttgattttc ttcaccttct
     8941 gccattccat aaccaaaacc tgcattagaa gtcgcgataa taatggtatt tttaaagtta
     9001 acttggttgc cctgtccatc agtcaaatgc ccatcatcta gcacttgcaa gagaagggta
     9061 atcacttgtg gatcagcttt ttcaatctca tccagaagaa cgattgagta cggattgcgg
     9121 cggacacgct ctgtaagagt atgggaattg tcatcataac caacgtaacc agctgtggta
     9181 ccgattaatt tggaaacggc tgtccgatcg ctgtattcag acatatccaa acgaatgatg
     9241 gcatccttgt taccaaacaa gtctagcgct aactgttttg ccaactctgt cttacccaca
     9301 ccagttggac cgacaaagag gaaggaacca attggacgat ttccgtcatc aaaacctgcg
     9361 cgatttcgac gaatggcacg agatacagct tccaccgcat cgtcttgacc gataacctta
     9421 gctgccagac gatttttcaa ttccttgagt cgttcaatgt cagaggctcc catttgagag
     9481 actggaattc ctgtcatccg ctcaaccgcc tgagccacat cattaacggt cgctaccatt
     9541 ttctgttgct ccgtatgatt atcaatctgt ttttgtagct tatcaatacg gaccttttca
     9601 ttcaaggctt tttcataatc ctctttctca gccgcttcca actgcaactg ttttgcctca
     9661 gccatttctg cttctaaggt ctgaatatct gtcacaggat gttgtgcagc caagtgagca
     9721 gcggtcacat cgaccaggtc aatggcctta tcaggcaagc tacgttgtgg aatatattgg
     9781 acagaataat caaccgcagc tctcaagacc tcatctggca attcaatatt gtggtgggct
     9841 tcgtaaagcg gcttaattcc tttcaaaatc tggtaggtgt cttctgcgga cggagcatta
     9901 accttgactt cattgaaacg acgagccaga gcggcgttct tgtgaatggt attgcggtat
     9961 tcgtcctgtg tagtggcacc gataaccgtc aattccccac gggataaagc tggtttgaga
    10021 atatccgcta aacccttgga acctgagtcc ccaccagtgc taccagctcc caaaatctga
    10081 tgaatttcat caaagaagag aatgatattt cctgcttttt tgacttcatc cacaagattt
    10141 tgcacatttt cctcaaaagc tccacgatac tgagtcccag cttccaagcc tgaaatgtcg
    10201 atggagatga tttccttgtt cttaatggct gctggcacat caccattgac aatagcttga
    10261 gccaagcctt ctactaccgc agttttaccg acacccgcat caccgaccaa aactgggttg
    10321 ttcttggtcc gacgagccaa aatttccgat gtttcttgga tttctttgtt tcgtccaatg
    10381 actggatcca acttaccttc acgcgcatct tgggtcaaat tgcgaccaag ttttgccaga
    10441 atcccgtctg actttatctg acctttagcc tgtatttgag ccacttcttc tgtctgtggc
    10501 aggcgaccag tctgacggta catagcaaat tcctccggtg tcacttcacg cccattgata
    10561 gaataacggc gacgttctgt gctatagcca cccatgttgc ccatgagttg attgaaaata
    10621 tcgtccatat tgttaaagtt attgaaattg ttgtgcatag tagttacctc atttataaat
    10681 tctatttttt gacttttact gacctttgtt ttaaaaaaat tgatttagtc ttttagtttg
    10741 cttttagtac taggcaacga gctgaaggca gtactggagt acggcaaagc gagttaacgc
    10801 agtaataaaa gataaactaa atgacgctaa tagggtataa tcctgtcttt catcctaacc
    10861 tccttagaag tttgtctttt actgaccaat aggttcaaga gtaagtcaaa ccgttctcgt
    10921 ttgacctaaa ctgacctttt aatcaaagaa ttcgtaagga cctttacctt acgaatctta
    10981 ttttacacca ttggtcagta aaagtcaata ggtttgtttg accttttttg actttttgat
    11041 aaaaaaatct acctgacggt agatttagat gataatccct tccaaatggt ccagttcatg
    11101 ctgaacaatc tgggcttgga agtctgtcag ctttaggctc tgctttttcc atgaagcatc
    11161 gaaaaactcc acttcaatct cctgatagcg tgtcgtcgga cgagtacctt caagcgacag
    11221 gcaaccctcc tcagtctgat agggcttggc cttgctgatg aggacgggat tgtacatgac
    11281 caggttggta aaacccatat tgacgatgat aatccgcttt ttgacgccaa tcatgttggc
    11341 cgccatgccc acgcaggcgt gagcgttgac taccaaagta tcctgtaaat cctgaccgac
    11401 ctgcacatct agctgagtcg caggctcaga cttttgttgc aggaagaaaa tatctttcat
    11461 aataggttga atcatgggaa cctctttcga taaagtatat agtattattt tactattttt
    11521 ttgataattt gaattatttt atgctttatc ggatgaggat agtaacgaaa agtaccagct
    11581 tttctcaaaa tatacccatt aaaattttgc ttaaagcgaa gaacaccatc tgagttgtcg
    11641 aatatccctt gaataccaag gaaattataa cgcttaagat ttcgttttat tgcacgttgc
    11701 atcgcctcat attgaagtaa gaaaggtgca gataggcttt gaaactctgg atatgagcca
    11761 ccaaaaagat aagttgcctc gttcacatca taaattatca gtgcacatgc caaaaaaata
    11821 ggagctgtct gagtttgatt taaaatattt tgaaccacct cctgtttttt caacaatttc
    11881 tgtacctgct gtgcatactg ttttgaattt ctagcacttg tttctatttc cttttcaatt
    11941 tgctttagac tggctttcgg gtcaagttct gcaactaaaa aatctgcctg tgtaccaaag
    12001 ctttcaaaaa gactgttata gtaaccacta tctctatctt caaagccttg tctagctcca
    12061 gtttcctcaa ttattttttt gaaagctgaa agctccttat gattgatact acgaatcctg
    12121 ataccgtaac tttctgaatt ttttatgttt cgtttactat ttttattgta ggattgcaat
    12181 aacgacgttg ttgaatatcc ttgcaaatcc ttcacataat gccaaaccgg ctctccattt
    12241 ggataacctg tttgtaagcc atcatgttta aatccaactt gcaccatctt ctcaattagt
    12301 tgagtatttg cttcactaat tggattccct acactatcaa agagttgata ggcttgggaa
    12361 ggcttgacca ccaattcaag tacgccttca cgcttcgcat agttttttaa agattgataa
    12421 aattcctcta aataagcatc atcggtaacc agcggtccag aattcaattc catatacaaa
    12481 ccaccagcca tcttcttaca gaaaagcaaa gtagaaataa caatctctga ttgtgaattt
    12541 ttaaaaccag catagcgaac atcatatcct cgcttggata gtaatccagc catctcaaca
    12601 gattgaaaaa atgatttttc atttacttgt tcacaatgct ttaaaaattc ttctttagtt
    12661 atttgacaaa aagtcattat tttttcttcc ttaatttttt tctaatttcc agtaaaactt
    12721 gaaaaatctt atataatatt ggcgaaacaa taagatcgaa ttccccaata tactcttcta
    12781 ctactggatt caaatgtgat ttaaagtgat aaaggcctcc gtctaaagtt ggctctattc
    12841 ctcctaaatt ttgccatttc acacctcgtt cgaaagcata ctttgctgtc tccacccatg
    12901 ttagtaaagc aggctgataa tgtttaaact tttcatccat accagcatag atattttcag
    12961 atgttcctgc aaaatcaatt gtcaaagtac cagccaatgg aactaactta ctcccgttac
    13021 gaatcagaga atttatcatt tctaattctg tattgattct tcgggtttct tttttataat
    13081 tttcaatctt cgattgtctt gtagtggagg tgaaagtcat ggattctttt actaattttt
    13141 cttcaagata agataactgt tcatatctct ttgctaaatc caaataggca actacaatat
    13201 aagaattttc tggataggca ttcaatattt tttgataata ctctctcccc cgcaagcgaa
    13261 tagatttgcg ctcctcagtc ttttttaata gctctgaaaa atctcttaac aattcctcac
    13321 gaccaattcg aatctcaata cctttattac gcgccgaccg aatattttgt cgaactcgtt
    13381 tatttagtga ttcctctgag aaggattcgc tatacaatac tgcatgacaa gtaggttgga
    13441 ttgtagccga catggtctgc actcgaccag accaaatacc tcccaaatca acaatcctat
    13501 ctttgacggc aagtacattt aattcttctt ccctatctcc tgttatagtt ttactagata
    13561 gtcgaataaa tggatcgaat tttataacaa cactgcgttc tcggagggca aattctttaa
    13621 tggacttaaa tacaaatgat actaattcag catcttcata atccattaca ggacctcttg
    13681 gtatataaat catcgtaaaa ccaaatggta ctatcaacct tctgataaga agagaagcaa
    13741 ctgccactaa tttcccatct ttaaaaaagc ctagtctttc atttcgccac tcacttttta
    13801 cggttgccca ctgactgctc tgcaagagat tggcctgtgg tgattgcttt acaaatgaat
    13861 catgttcctc agcagaaata cctattttat aagtgtaaaa cattgattat tccccttatt
    13921 cataattact tttaacgcta ttacttttaa cgctgattag aagggcttgg ccgataggtc
    13981 aagccctgat atgcttagta tatcagggct tggccgatag gtcaagccct gatatgctta
    14041 gtatatcagc ggttttgtca agtattttgt cctgttttca gtaaaaaaag cctagttttc
    14101 actagacttt tcttatttat tttccacaat aaatcgcaat cgcttgactg acaaaggacg
    14161 ctgtaccttc tcctcccact tgatcaataa attgagtaaa ccggttatct gcaatataca
    14221 tttgtcctag acttgctaga atttcattgg tacaattata aaaattctca ctaatataag
    14281 ctttaagaac ctctacctgt ttctgaactt tagaatcatc agctgataaa ttcttcattt
    14341 ttccaaattc catcatgata ccagacattt ctgcacttat ctgagcaaac ccttcctgat
    14401 tcgtcttagc agaaaattcc tgaaaagctg cggtattccc ccatctttct ttagcttcct
    14461 cctggaaagc caacaaatct gacttatcaa acacttcaaa attcatgtaa ttttctccct
    14521 tctgctgtaa agacttggca tgctttatga ctttttccaa gtgtttcttt ttcaactcca
    14581 gtaatctaat ctggtctttc aaagctgact ctctgtcata agctgcattc cctacaattt
    14641 ttttaatttc tttgagagga aattccaatt cacgaaaaag taagatttct tgcaactttt
    14701 caaacgcctc attatcataa taacgatatc cgttttccgc aataaaacta ggtgtcagca
    14761 aatttatttc atcgtaataa tgaagtgtgc gcacactgat acctgaaagc tgactcattt
    14821 ccttcactgt tttcatgggt aatctcctct cataaatagc agtataatct atgacccaac
    14881 gttagagtca aggaaaaaat tacatttttt tcagccgatt ctccacaata gcaatctcat
    14941 tctcttgaca ccagtccagt acaagttctt tgtaacattg tgtttcaaag gcataccatt
    15001 cttccaaacg gtcacatctc tctaactcat tcttaaaacg tctaaaagca ccgcgccctc
    15061 gaatagctcg agacagacgg ccagacaagt ctccatcagt caaatcagaa atatagagtt
    15121 ccataaatgt gtaagggttg aagtcataat aagtcggcag ccgtacgaac cttcccgtca
    15181 catcctcctc aatctcttct tctaaacctt cacaggattc aagccccgtt tcctcaacag
    15241 acagatagac taattcatct aaatagctat cataatagta cctatcacct tgactaatca
    15301 tctgcaacga atcaaccaca tcttgaaacc aaactgccat atcctaccac ctcactgcat
    15361 ctaattcctc tatcatggct ttgcgtcgcg gatactggac tttccacgaa gtgcgaagac
    15421 ttgtactcac cactttccca tcaggtaaac ctgcaatttt tactaaatac cctgctaact
    15481 gacgatagcg gcttcgacta ctagccacat ccatctgctg acagagagct tgagcgtagg
    15541 catctcgtaa ttgctcgggc agtttctctg ataagtagtc ctcaaaccga tccaaatttt
    15601 ctaagaacca gtaacttgct gtaatgcggt ccaataattc ctgcggtcgg tctgccaatt
    15661 gcaacaattt caactgctgc gactggaaac gaccatcctc cagcaaatca tctaagtagc
    15721 tctgccattc ttccctagaa acatagtccc gcaactcctc tatcagatcc aaatcagtat
    15781 caccagcaga gaaaatcatc tccagcaatt cttctctgac cttgtcatcc tgcccctgag
    15841 accgatagat gtcccgtaac tgctggctat aatccgacac cagtcccctg tactgggcat
    15901 ccaggcgctt actttcctgc aagagatgga ctgcccgatc tagctgctga tttgccacag
    15961 cctgagcaat ggctagttta cgaagtccag ccacctccca atgattggcc tggaaggtca
    16021 gcaagtctgc ctcactagag tccaactgaa ccaacaacct gtaacagagc aaggcaaatc
    16081 ggtcacgacg gaatttccat gaccaagagg acttatctcc ttcttctatc acctgcaaga
    16141 ccgcttgaaa ataggtcaat ttctgctcaa ggaaatgttc ttcttgaaac tctgtttcta
    16201 caaattccat gagaaggtct tctgcaacct catagccact tagcttttct aagcaccagt
    16261 ctagtaattc ttggacaatc ttatccggag ctacagtcaa taaatgctgc cagtagccag
    16321 caagtctata cagcagacta ccaatcgttc cattggaatc atccaattcc tgctggcaaa
    16381 tctggtgata gaaggcatct gatatagcca agaaacactc atactcacac ctatccagca
    16441 aaggctggag atattgaacc atggactttt ccacggcccg ttcgtaatcc ctagtctgcc
    16501 tatactcgat aaagcccgta cgcctgtcct caaaaggaag ccctaggtct ctgattgcct
    16561 ttttcacatt ttccacttgc tgagaagtta gctgggcaga gaaacgcagc tgaattctat
    16621 tagccagttc cctatcttct tgagccaatt caagaacaaa agcccgtagt tgctcaactg
    16681 tcaatttatc caggagctgg gcaagtgaca catccttacc ttcgacagct ggctgaccct
    16741 ccaactcaga aatggcaaac aagactgcag ccatgtgctt acagtgattc atttcctgag
    16801 cataaggaca ctcacaccac atactgacca gctgaccata ctcaaagtca atcgcaacct
    16861 catagacttg actgccaatg acatgtgcac agtagccctc acctacctct tgaagccctt
    16921 gaacagcgtc atctaaaaac aaactgcagc ccctatctac aatgtgaggc ttaaaatagt
    16981 ccatccaatt tttcatgatt tatgtccttt gattttgtta cttaaattat acaaaaaaaa
    17041 taggaacgtt ttcaagtcaa ctgcaaaaac ttcctatttt ctcttttttc atctcactcc
    17101 accctcactg gcacgcgccc gtaggtctgc tctgctattg cgtcagcacc cagttgatag
    17161 accacatctg cctgctgggt caggctgtcc cagggctctt tgccgatccg cgtcactagg
    17221 tccacccgct ccttgacagt ctttagatag gcctggccac gagctgaaaa gcccagcaca
    17281 tggaccgcat ctggcaaggg attttccacc gcattgatca ggatgtaggt cagcacccgc
    17341 cgcaccctcg ccttggtgta gcgcttggtc gcaacagcat ccactaactc ctccacggtc
    17401 gctacgctcc caatagcaga gcggatacga ctggctagtt cttcgttgac ctgaaagacc
    17461 tgactgagat ctgggtgggt cgcaatctgg tagcggagca ggggaaaata atccttccag
    17521 cttaccttgg tcgcctcttc aaagagactg gcagacggta aaaagtcacg aaccaagtcc
    17581 agatggtcag cacccttgcg gatagctgtc gccgaggcgt aggatgtttc cacctcttcc
    17641 gagtgaaaac cagccccctg ccgttgaaca gggctgagct gaatgtctgt ccctgccacc
    17701 gccttggcgt aagccagagc cagaatatgg ttgggcgtat cacctgtgaa ggttagacct
    17761 gcaaattcct gccacatagc ctgggtcttc tggggataag agagattatc tggcaagttt
    17821 ttcacaaaat tttccatctc ttccgactta tccacataga tatccgcaat tttctggtaa
    17881 tccagcattt cttccgtacc gaaaaccagt ttttccacac ctagcctgtg taaaatgcta
    17941 attgctccct tggcaaaatg gtcagccgac tggacagaca ccaaaaaggg catctcgaca
    18001 acaagatctg caccgtgttc caaagccatc tgagcccgtg tccacttatc cacaatagct
    18061 ggctcgcccc gttgcataaa gttgcctgac atgacgacaa ttttcagccc ctcagcctgc
    18121 tccagcaggt atttatgccc cgtgtgaaag ggattgtatt ctgctattat ccctgaaatc
    18181 atgccttgac cgccttgaaa aaccaccgct ggcttgtttc tgtcggcgct tcatcttcaa
    18241 aatccgcaaa gacttccaca gatgcaaaac cagcttcttt caataattcc acataggttt
    18301 caatcggata ggtccgctct tcatgcactt catcccgacg gataaacctc tcctcttgac
    18361 tgtcctcatc tttgacaaag aaggtcaatt catgaacaat ggaatactca tgctcaccct
    18421 cataggtgtc ccagacaaag gcaaaatcct cgtagttttc atggtagcta tagcctgcaa
    18481 agacttcctc catttgatag atggagtgaa cgtcaaaaag gaaagtacca ccttgattga
    18541 gaacagagtg aactccttca aagacccgca aaacggcttc ttggtctgcc atatagcaca
    18601 gactgtccga gtaacaggtc accgcatcga aatctcccac accttccaga gccatcatat
    18661 ctgcttgcgc cagttccatc atgacaccag cagcttctgc ttttttctgg gccaattcca
    18721 acatttcata ggacaggtca agacctgtca cttcaaagcc cttttgagca aaacgtacag
    18781 cctgaatccc tgtcccacag gccaattcta aaattgtctt ggtgtcttgt ggcaagttcc
    18841 gcaagctaaa atctgtccat ttatcataca agctgtcatc catgatttca tcatagaccg
    18901 ccgcaaaggt ttcataagtt gccatatttt tcctttcata aaaagcagcc catcgactgc
    18961 ttcattaact catgctgtgt tcaagaagtt catcacttct aattacataa tagtgaactc
    19021 tctttggtca ctttcgaatt ttatggtgac cagctgaaac agttccccaa actattcctc
    19081 ttctaaaaag tctgcgactt ctaggaagct gccttcatgc cataattttt cgaggttata
    19141 gaggtcacgc atttcttctg agaagatatg aacgactacg cctccaaggt ccaaaaggac
    19201 ccagccaccg ttactatcgc cttctacacg gctactcttg attccaactt ccactacctt
    19261 ttcacggatg ttttccgcaa tagcctccaa ctggcgactg ttcatggaac tggcaatcac
    19321 aaagtagtct gtcaggctgg tcacgccttg aacatcaatt acaacaaggt cctcagctcg
    19381 cttgtcatca gcagcctgaa ccacaacttt tactaaatct agttctttca tcttatcctc
    19441 taataatatt ttctaattta tccacctggg caaaattcca tgaccagatg ttttggtagt
    19501 ggtcaatcaa gtctttggca tccaatttgc ctgaataacc tgtcgttgtt ccatccttta
    19561 taattgcgag ttgatagccg tactcaaagg ctaccttgac cgtcgtatca atgcaaaaat
    19621 tggtcgccat gcccatgatg atgagctgct caatttcctt ttcctgcaaa taagcatgaa
    19681 gccccgtttc cttgaaggca ctgttaaagg ttttatcgaa aatcttctca ctagctaagg
    19741 gtgcaacaat tgagtgaatc tcccagtcag cagtcccctt gaccaattcc tgatgatgat
    19801 ggcggacatg gatgaccact agccccgctt gacgggcttg tgcaaggcta tcttgccaga
    19861 gggctaatcg ctcttcaatg gcataaggtt tttcctccac tagaaggttc tgaatgtcaa
    19921 tgactaacaa tgcagatttc atagcttaac accaggcgtt tccaaacgga agaccaattc
    19981 tctttcttct tcactatcca agacaaaatc atttttctcc aagagataag ccatcttctg
    20041 attgccctta acataagctg caatcaaatg gtcgcagaca ggatgtgatt gagccattgc
    20101 tattacaacc tccaaagccg cctgaccata gccttttcct tgaaactctt ggccaatcat
    20161 aaaccgccag agcatatact gctgtatgtc ttcatcaatg tcaatcaagg caaaaccaac
    20221 cacctgttca tctgcccaga tggcataggg gaaaacatcc ccgttttctc tgtaaagcca
    20281 agcgtcagcg agtgaacgca cgtttggagc cacgaagccc atatctgcct cggctactgt
    20341 caagtctaag actgcttgat aggaaatctc atccacaggt tttaatgtaa tcatccctac
    20401 tccttcaaca cagcaacata gccattatag gtttccaagg tttgtggata aatgggaatt
    20461 cccttcttgg ctaagtaaga aatggtttgg gcagtttcat aggctactgc cttgtccaag
    20521 gactctcttg cgatacgacg cgcctcgtcc accccaggaa aatcccgatt gggttcgatg
    20581 tagtccgcca catagagaac cttgtccagc aaggtcatct gccccgcccc aacggtgtgt
    20641 cgttgaatgg cttggaaaat ctcctcatct tccaaaccaa aatcttctgc gattttatag
    20701 gcgccaacca caccgtgcca gatgttatta tcccagttga gcaggtcctt gtccaaatca
    20761 tacttggcaa tcaagtccag aaagacttgg tcttccactt ccttagcata gtcatgcaag
    20821 agtgctgcca gactggcttt tttcggatca cagtcgtatt ggtctgccaa ggcaattgct
    20881 gcctgctcca cacccaagac gtgttggaag cgtgctggct tcatgaccgc acgaattttt
    20941 tccaaaagag cctgacggtc aaatgtcaaa tctgctgcaa tcattggtaa agtccctttt
    21001 cttcgatata gtccagaact tcatgaggca ccataaaatt cggtacccgt ccttgcttga
    21061 taaagttccg taccatgctg gatgaaatgt ccatcaaggg cacatctacc cagataaccg
    21121 gataggacgt ccccgccttg taacgaggac gctggacacc aacaaactgc accaactgga
    21181 ccaattcatc aatcctatgc cattttggca ggtagtctac catatctgca ccgatgataa
    21241 aataataatc cgtatcagga tttttttctt tcaacaattt catggtgtcg taggtatagc
    21301 tgacaccacg gcgttctagt tcaacggttt caatccccaa gccgtcaata cctgcaatag
    21361 ccatcttgag catggaatag cgatggtatt cgtcaatggt ttcttttgta tccacatgag
    21421 gcggaatgaa ttctggcatg agcaagactt catccagctt caactgttga cggacctggt
    21481 ctgccacaat caaatgagca ttgtggacag ggttaaaatt ccctcccaga atccctactt
    21541 gtttgcgatt ggtttctttc ttttcaacct ctaattcaac cttggtaaag ggtgttaaga
    21601 gttcaatagc cataggctct ccttcttaga tttctttgac ctgtttggaa attttacggt
    21661 tctctttctt gctagattgt ttgaataaaa tcaagatgcg accgattttt tggaccgtat
    21721 ccacaccgat ttcttcttcc aagatttctg ctacttcgtg gatgttttca tccgtatttt
    21781 gtagcaaggt caccttgatt aattcacgcg catccagcgc ctgacgaaca ctggttttaa
    21841 tctggtcatt tagaccattt ttcccaatct gaataatggg tttgagactg tgtgcctgac
    21901 tgttcaaaaa ggcacgttgt tttgaagtta gcataattta ttatacaaag ggcattgtaa
    21961 cagactggga gactgttaca atcgagaaat aaagaaaaca aagtttttcc ttattgcgcc
    22021 gatatactta gcccatgttc aaatcagaag acttgaactt cctttctctt taattgtaaa
    22081 aactgaaatc aaatacctat tatactcaat gaaaattaaa atcagactag gcgacgcaga
    22141 tgcagataga accctactac tttcacgctt tcaggtagca ggctgtaaag ctccactgga
    22201 gctttacact catcaaatca agtcaacaac gtctgctttt tattttcgaa gagtattaga
    22261 taattgcctt gcggatcacc acatccacac ccttaggtgc ccaggcagca atcttggcct
    22321 tttcattgac acgaatccaa ccaagacctg agaagaccac atccgtcttt tcgttgatgg
    22381 taaattcatg gcggaccaat tcaggaaatt ctttcaattc cttgctggtt ggtggcacta
    22441 aaagtgagcc cgcatgtttc tgataaaact cgctagctcc ctgcaacttg gttcgatgga
    22501 gttggagctc attgtcaaag aaggccgtaa agccttggcg ttcaccagcc acaaaatcaa
    22561 atcgtcccag accagccaag aacaaggttt gttctggatt gagctgatag gtctttggtt
    22621 tgatttcttt ccgagggctg atgtacttga gatttttagc cgtcaaataa tgggccatct
    22681 ggtgacggtg gataattcct ggcgtgtcat agacgtatga accatcatcc agaggaattt
    22741 caatcttatc cagcgtcgtt ccagggaaac gtgaagtcgt aatgacatcc ttgtcccctg
    22801 tgatttcttg aataatagcg ttaatcaagg ttgacttgcc gacgttggtc acgccgacca
    22861 catagacatc ccgtcccttg cggtgttgtt caatcttttc aatcaaatcc ttgatagcct
    22921 gcttattttg ggctgaagtc aagaccacat caaccggtcg catgccgatt tcatgtgccc
    22981 gctcggtcaa ccactgagta accttgcctg tcttgacaga cttgggtaaa atgtcctgct
    23041 tgttgccgac caaaagcacg tcatttccag aaataaagcg aggcaagcca ggaatgactg
    23101 acccattgaa atcaaaaata tcaataacat taaccaccag ggcatcgctt tctcctacgc
    23161 tatggaggag tttcaagaaa tcgtcatccg agatattgac atctgaaatt tcattgtaat
    23221 ggcgcaaacg gaaacaacgt tggcagtaga gttgccctgt ttccaagcct ttttctaggg
    23281 ctgattgagg tgtaaatcca gcgacagcct tgtctagcgt ctgaatctgg gcaccacagc
    23341 cgatacaaaa taattcttcc acttacatct ccctcttgta gtctatcgct ccatatttag
    23401 cgatgatttt tttcatagtc cgtcgctcac gccaacggtt aatctgcgta ttgatagagt
    23461 ccgtctttag caagggtttg accaagacag acttgagacc agctcgctta gcagcccgaa
    23521 tgtccgtcat cagctgatct ccaatcatga ctacctcatg cggttggaca tcaaagcgtt
    23581 tcaaagcacg gttaatccca aaagtgaaag gcttgagagc gaaggcttca aattcaatcc
    23641 caaatttttc aaccgcccgt ttgacacgtt cgtatttatt gttagacacc accacaacag
    23701 gaatacctgc gtcctgtaaa tcctgtaacc actggcgcat ctctggcgta ccatcgggat
    23761 tattccaagc aatcaaggta ttatccaagt caacaaacac tacttttatg ccatgttttt
    23821 tcaagctttc aacggtcacg tcataagcct tttccaaggc aaaatccggc atgtaatttt
    23881 ctaaactcac tgtcgtctcc aaagtttttt atcagataat tataccattt ttctaggaaa
    23941 aaagcgaata gatagccaaa aggaaaacac ccggtggaac cgagtgccta ttctacgaag
    24001 ctatttgctt tctaaaatcc aatccttagg aatgaaaatc atatgggtca acaaccaatc
    24061 aatatccagt gaatatttcg agaaggcaaa tccaatttcc tcaacaccag aatcatcctc
    24121 atccatgccc aaaatcgtcg tcgcatgacc ataatcagca tgactgtcat caaagaggcg
    24181 ccaaatcagt gccttgtaaa ccaatttttt ggcatcataa agcgtataag tctctcgata
    24241 ttctgaaaag gctagacagt ccttgccttt gggttcgaca cccttaagtt gagcaatagc
    24301 aatcaagcta tcatagttgt gataacggag ggagctactc aaggattgag ccaacctgtc
    24361 tgcatagtcc agggctaaat cactcacctc cacagccaca gttcccaact gttctcgcag
    24421 tggattgagc aaattcgcag caaagcgagc taactcttca cggatctctt gaggtaaatt
    24481 ctctatatct tccagaataa cctccctatc ctgctcagaa cccttgtaga cattgatgtc
    24541 tagcccctga tcacccagtt tttccagttc agaatcaaaa cctgttttcc ctgctcgaac
    24601 atattgagcg agagtttcat agtaaccttc tggcaagatg atacgttcta aattatcagc
    24661 tctttcaatg attgtcatag atttcttccc ccctatgctt gatattctta ttgtaacaag
    24721 ataaggggaa attataaacc ttttcaactt ttattacata cttataagaa gtgtaaggat
    24781 ttcatatgtc ataacctacc aaaacaatct tgtcccatga acttggtcaa tagctagttt
    24841 ttctagtaaa gtcggcacat tgtccacagt caatcctcca ccaatcaaga tttcaatttt
    24901 accttgtgca taggcgacaa tttcctgtaa ccactccaca ttgttcaagg cagaccccgt
    24961 cagacttcca cgcgtcaaaa tccgtgtcac tccatgctct gccagccaat caagagcctc
    25021 aaattggcgt tcgcgaggaa tttggtcaaa agccatgtga aagacaatct gacagtcctg
    25081 tgaaacagca aacagtcttt ccaaggctgg ttcgtccaac caattttcct cggttaacaa
    25141 accataaacc agaccatctg accccagttc tttggcaacc ttacagtctt ccaccatcat
    25201 ctcaatctct gcctcatcat agcaaaaatc tccaccgcga gggcgaatca tggtcatgac
    25261 tgtggcttca ttctcatgag ccagttgaca aacatgtttg accactccat aactcggcgt
    25321 cgtccctccg actgccaaat tatcgcagag ttcaatccgc tgggcaccca ttgagatagc
    25381 tttggcaaga tctacgtggt tttccgaaca aaattctttt atcattgcaa tttcctctta
    25441 tgtcttttac tttagtatat caaaaaagag tatattaacc aatactcttc tctgaaataa
    25501 taatatcctt taatgaaata agaagaacag ctcctaatat caaggccatg cctagaaaat
    25561 caattggata aaaacgttca ttgaccaacc ataccgcaaa aaatactgag gcgattggtt
    25621 cgatagaagc caatagacta ccattgacag gaccaaccat actgacccct ttgagaaagg
    25681 cagtataggc aaaaatcgtc ccgactccga caatacctaa caggcccagg aaacttccac
    25741 catcaatagg aagacgatgc tgccaagttt gcaaaccaag cgtgactaca aaaccaccca
    25801 ttaacatccc taaaccaatc accgttatac tgccgtattg acggattaat ttacctggca
    25861 aaataatata tagcgcataa gtaaaggctg agaagattcc ccagaacaaa ccgattggag
    25921 tcactgccaa ttcatctaat ttgccatgag tcgcaatcaa aagtgttcct gctacagcta
    25981 agataattga aatcaactca atccctgatg gtttttccct atttttcaaa caggtataag
    26041 ccaagactaa gatagggcaa aggtattgta aaaccgtagc cgttcctgca tttgtatagt
    26101 aaatcgcttg aaggtaggcc atttgattga gtaccaaacc aagcatagca aagacaaaaa
    26161 ttcctaacaa agcccgtttg ctctttatga ccttaattag ctgctctctg gctgtcaaat
    26221 aggctagccc gagcagaaaa acaccggata ccatcaaccg aagggaggta atcatatcca
    26281 ctgatacacc acgtgacatc aagtactgcc cacttacccc cgaaagtccc caagctatcc
    26341 ctgcaactaa agttatcaag gttcccaatc ttttttctgc catcctatct ccttttcaca
    26401 ctgcgaatat tcctattata ccaaaagagc aggacaccgt cccactcttt gctgtcatta
    26461 ttgtttgagg cccacaaact ctacgaatcg taaaaaagct gcctgacctt ctgaagtgcg
    26521 tttatagaca cctgcatctt ctaggacacg ggcgaaaatt tgtccgacag atgctcgaat
    26581 gatttcttca gccctttctt ctgtcacatc tggatgctca gccttcaacc tatccgccca
    26641 aggctgatga tagtcagcca cctgactatc ttgacccagt aagaattttt ctacttcagc
    26701 caattctgcc ttcaagcgtg gaggcaaaat cgccaagccc atgacctcaa tcaagccgat
    26761 attttctttc ttgatatgtt gcacatctgg gtgtggatgg tagatgccat ctggaaactc
    26821 ttctgaggtc tgattgtcgc ggagaaccaa atccaactca tacaaatctc ctcgtttcct
    26881 agcaatcggg gtgatggtat gatggggagt tccatccgtt tcagccttaa tctgaacggc
    26941 atcgtctgag taactccgcc atttttccaa aatcttagcc gccaggctca atagcgctgg
    27001 cttatctgcc gagctcaaac gaataaccga catgggccac ttgacaaggc cagcagatac
    27061 ggactcaaag ccgtcgaaga ccagctggcg ttctatcggc gccctttcca tggcaaaact
    27121 gtgccgccca ccctgatagt gattgtgggt caagatggag ccacccgaga tggggaggtc
    27181 agagttggaa ccgacaaaat aatctggaaa gatgtctagc aggttcaaca gctgttcaaa
    27241 tgttcgaggg ctgatgacca taggcacatg ctcttggttc aagaagatag catgctcatt
    27301 gtagtaagca tagggtgaat actggaagcc ccactgttcc tgtccaagat ccaagcgaat
    27361 aatgcggtgg ttggcgcgtg cggggtgatt gatgcggcct tggtagccct cgttttccat
    27421 acagagtagg cactgagggt agttagaagc ctctgccaag cgggctgccg caatagcctt
    27481 tggatccttc tctggtttgg acagattgat ggtaatttca agatttccgt agtctgtcgg
    27541 tgtctgatag tagatatttt tggcaacagc cgccaccttg atatagtcat tgcgcttgct
    27601 taaagcatag aaatctgcca cagcctgctc tggactgtcc tggtaggtct gccaaaaatc
    27661 acgattgacc tgactaggac ttggcgtgat taagtccatc aaacaagccc caaccatgtc
    27721 ctgctcttcc agcaattcac ccacaaaacc agttcgcacc gcttgagcta ggagctcttc
    27781 cttgagttca atcaagtctg ttagctctgt ttggacagtc aaaacttggt ccccaaccaa
    27841 ggctaaaacc cgatttcgca ggtaaagagc atccatttct tcaaaactac tgttggcaat
    27901 gacctgctca acaaaacgat ccaccaatcc agccatcatt tctccaatct attttcgaga
    27961 taaaacgcga gagcctccag caatctccgc tacatagaag ctaggctcat agccaaccac
    28021 ttcagtatag gtcttaccga cattttcagt aaaggcatcc accttatctt tgtggacaat
    28081 ggcaatacca caaccaccga aaccagctcc tgtcatacgg gctccgagaa caccttcttg
    28141 ttcccaagca gtatgggcca aggtatccaa ttccaaacca gtcacttcat aatcatgctc
    28201 caaagaaaca tgagaagcat taaccaaacg accaaaggtt gccaaatccc cttcttccaa
    28261 ggccttacgc gcctgcaagg tccgttggtt ttccaagaca gcatggcggg cacgcttgat
    28321 gcggttttca tctttgatta agtaactata ttggtcaaag gtccactcat ccaattctcc
    28381 cagagtttga atagtcaaaa ctgcattcaa ctcttccaca gctttttcac attctgcccg
    28441 acgctcattg tacttagaat ccgtcaattc acggcgttta ttggtgttca tgataacgat
    28501 cacatggtca cccaagtcaa gtggcaccaa ttcatactcc aagctattgg tatccagata
    28561 aatggcacgc tggtctgctc ccataccgat agcaaactgg tccatgatcc cagaattgac
    28621 accgataaag tgattttccg tttgtttccc aattttcacc aaatcaagac gagtcaactc
    28681 aagaccgtac aattcttcta cgataatgcc gatcaagagt tccaaggaag ctgatgatga
    28741 caagcctgaa ccatttggaa tattaccgta aacaaagact tccatacctg tatcaatggt
    28801 ctgccctgct tctttcaaga atttgagaac tcctttggca tagttggtcc agttatccgc
    28861 cttatcaaag accagattgt tcaaatccac ttcgataatt ccaagttctt caaagtttgc
    28921 ggaataaaaa cgtagaagct ggtcatcacg tttgcgagca gccccgtagg tccccaaggt
    28981 aatggctgct ggaaagacat gaccaccatt gtagtctgta tgctcaccaa tcaaattaat
    29041 ccgaccaggt gagaagaaag tcgcatctgc ctcttgacca aatacatcga gaaaggcttg
    29101 attaagttgt tctttgttca taggaacctc cttgatattg taatcgtttt cttttattgt
    29161 acaactcaac aatttaaaag tcaatatttt tactaaattt ttactaattt tatcttttat
    29221 gctatactag agacaaataa acaggagaaa actatggtta caatcaaaga catagcaaaa
    29281 caagcccacc tttcctctgc caccgtttcc cgcgttctca agggagacct gaccctatcc
    29341 gtcagccaag aaacccgcga ccgcattttc aacttggcac aggacctggg ctacaccaaa
    29401 cacctcaaaa aacaagctcc ccaacaaaaa ggcaccatcg gcattgtcca atggtacacc
    29461 gagagcgaag agctggctga cctctactac tattccatcc gtgccagcat cgagcagacc
    29521 gccagccttc tcggctatca aatcatccgc tccttcaacg acctgaccaa ccccctcctc
    29581 caagaagtgg acggcatcat cgcagttggc aaattttctt ctgggcaaat agcagagctg
    29641 accaacttgt cttccaagct gatctttgtg gattctgata cgctgacaga gggattttcc
    29701 tgtgtcacaa ctgactttga acactctgtt cagactgtta tcgaccactt ccgtgcacaa
    29761 ggtctgactg atatcggact cctagtcgga cgggaagaaa ccacagacgg acaccaactg
    29821 ccaacagacc cccgcctgac tgcctttcgt gactacctag acaccttggg cattctccaa
    29881 gaaaattata tctaccaagg aaaattctcc acccaatcag gctatgagct gatgagccag
    29941 gcaattgagg acctaagcga caagctaccc tctgcctttt tcatggctaa tgataccctg
    30001 gctgtcggcg ctctgcgtgc tttacaagag cgtcaaatcg cagtgccaga tagagtccaa
    30061 ctcatcacct ttaacgatac agccatcacg cgccaagtct atcctgcctt gtcttctatc
    30121 agcgtcttta ccgaagaaat ggggcaagaa gccatgcagc tgctagaccg tgtgattgct
    30181 agtccgcagc cccaccatcc ccgtaagatt aaactaggta cacagctggt tatacgggag
    30241 agttcttatt gataaggaaa tcttccatca ttccgttact tatattgaat tttatacaag
    30301 tggtttgata ccgagtacgg cttttcaata agtattaaag atgttaaact tcttgtaaaa
    30361 cttgtactaa aatttgcata gcacatgctc atagccaaca tgaacagatt atttgcattt
    30421 tacaagtaat ctgttataat ggatatagaa aaaggagctg gacggcaatc cagccccaaa
    30481 tgtagaaccg ttaaaaagac ggtggctcag tttagattat ttagaaataa ccgttactgt
    30541 ccaaagtttg acggttattt ctttttgtca t
//
LOCUS       DASFQS010000012        29513 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.012, whole genome shotgun sequence.
ACCESSION   DASFQS010000012 DASFQS010000000
VERSION     DASFQS010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 29513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29513
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.012"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            59..649
                     /locus_tag="U1041_000531"
     CDS             59..649
                     /locus_tag="U1041_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4767659.1"
                     /translation="MSNMYYEKNPTVAHDIHEIHVNLLDTPMSFMTDAGVFSKKMVDY
                     GSQVLLKTLHFEKGASVLDVGCGYGPIGLTLAKVFSTKTTLIDINSRALDLATKNAER
                     NGVTAKIYQSNIYENVDETFNHIVSNPPIRAGKSVVHEVIAGAFQRLEANGTLTIVIQ
                     KKQGAPSAKAKMEEVFGNCQIIKKDKGYYILESVRE"
     gene            646..1923
                     /locus_tag="U1041_000532"
     CDS             646..1923
                     /locus_tag="U1041_000532"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018543466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HEM4767660.1"
                     /translation="MRAVDLIQKKRDGLELSSEEIKWLIDGYVAGTVPDYQMSALAMA
                     IYFKGMSTREISDLTMSMVATGEQIDLSAIPGIKVDKHSTGGVGDKVTLILAPLVASF
                     DIPVAKMSGRGLGHTGGTLDKLESIKGYQIEVSQEDFIKQVQDTGVAVIGQSDNLVKA
                     DKLLYALRDVTATVDIIPLIASSVMSKKIAAGADAILLDVTVGEGAFMKTVEEARVLA
                     QTMVDLGKAVGRKTVAVLTDMSQPVGTSIGNRLEILEAIEILQGKGREDVTEFICELA
                     QIMLGLANVEKSIEEVRQHIDNGAALKKFEEMVLAQGGDLEDLYRPVQVTQQVPVLAE
                     EDGYLVGLPALEFGLFAMKLGAGRAVKTDDLDYETGIVFHKKVGEAVSKGEQIATIYA
                     NENISENMLTNFQKNVKIDKESVKTKEIIEIIS"
     gene            1939..2601
                     /gene="deoC"
                     /locus_tag="U1041_000533"
     CDS             1939..2601
                     /gene="deoC"
                     /locus_tag="U1041_000533"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEM4767661.1"
                     /translation="MKLNKYIDHTILKPETTQEQVEKILAEAKEYDFASVCVNPTWVA
                     LAAESLKDSDVKVCTVIGFPLGANTPAVKAFETKDAISNGADEIDMVINIGALKTGNY
                     DLVLEDIKAVVAASGDKLVKVIIEACLLTDDEKVKACQLSQEAGADYVKTSTGFSTGG
                     ATVADVALMRKTVGPDMGVKASGGARSYEDAIAFIEAGASRIGASSGVAIMNGAQADG
                     DY"
     gene            2588..2977
                     /locus_tag="U1041_000534"
     CDS             2588..2977
                     /locus_tag="U1041_000534"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEM4767662.1"
                     /translation="METINLIELAVKNSQKAYVPYSKFPVSAVLVAKTGEIFTGVNIE
                     NASFGLTNCAERTAIFKAISEGVKDFSEIIIYGETEKPISPCGACRQVMAEFFDKDLK
                     VTLVAKDQSTVEMTVGELLPYSFTDLT"
     gene            3058..4125
                     /locus_tag="U1041_000535"
     CDS             3058..4125
                     /locus_tag="U1041_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEM4767663.1"
                     /translation="MNKKLVGLGLAAVAAVSLAACGNRASKSSSSEASSSADTSVKAA
                     IVTDIGGVDDRSFNQSAWEGLQEWGNAAGLSKGNGYDYFQSASESDYITNLDSAVAGG
                     YNLVFGIGFALESAIAEVAPNNPDTHYVIVDSVVPDQDNVVSVGFADHEASYLAGVAA
                     AKSTKTNHVGFIGGMEGVIIDRFEAGFVAGAKSVNKDIKITIDYAGSFGDAAKGQTLA
                     AAQYAAGADVIFHASGGTGNGVFAAAKAENETRNEADKVWVIGVDRDQSAEGEYTSKD
                     GKSSNFVLASTLKQVGTSVKDIATKAVAGEFPGGQVLQFSLKDKGVELAETNLSEDAS
                     KAVADAKQAILDGKVEVPEKP"
     gene            4291..5826
                     /locus_tag="U1041_000536"
     CDS             4291..5826
                     /locus_tag="U1041_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767664.1"
                     /translation="MTKDYVIEMRNITKIFGEFVANDHINLNVRRGEIHALLGENGAG
                     KSTLMNMLAGLLEPTSGEIVINGQSVKIDSPSKAAQLGIGMVHQHFMLVDAFTVAENI
                     ILGSETTKGGVIDLKKAIAEIKELSAKYGLEVDPTAKVADISVGAQQRVEILKTLYRG
                     ADLLIFDEPTAVLTPAEIAELLKIMKALVEEGKSIILITHKLDEIRAVADSVTVIRRG
                     KSIETVAVEGATNQDLAEWMVGRSVSFKTEKVEASPKEVILSIKDLVVNENRGIPAVK
                     GLSLDVRAGEVVGIAGIDGNGQSELIQAITGLRKVKSGSITIKGEEVVGKTPRKITEM
                     QVSHVPEDRHRDGLVLPMTVAENFALQTYYKEPISKNGILNYNIINEKARALMEEFDV
                     RGASELVPIKALSGGNQQKAIIAREIDRNPDLFIVSQPTRGLDVGAIEYIRKRLIAER
                     DKGKAVLVVSFELDEILDVSDRIAVIHDGVIHGIVEPAKTNKQELGVLMAGGHIEKGE
                     EHA"
     gene            5819..6880
                     /locus_tag="U1041_000537"
     CDS             5819..6880
                     /locus_tag="U1041_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4767665.1"
                     /translation="MLNKYKNLALPLMAVVSGILLGAIVMLVFGYDPIWGYEELFYSA
                     FGNIKSIGEIFRAMAPLVFTALGFAVASRAGFFNVGLSGQAYVGWVFAGWFALANPDL
                     PRPVLILGTVLIAMLAGGIAGAIPGILRAYLGTSEVIVTIMMNYILLYSCNYIIRDVF
                     ADSLMKNTDSTVNVSANASYQTEWLRALTDNSRMNIGIFFAIIAVFVIWFLLTKTTLG
                     FEIRSVGLNPTASDYAGMSAKRTIILSMVISGALAGLGGAIQGLGTFQNVYIQSGNLD
                     IGFNGMSVALLASNSPLGIPLAAFLFGVLSVGAPGMVRAQIPPELINVVTASIIFFIG
                     VKFIFEQLLKSRNKAKGAK"
     gene            6882..7835
                     /locus_tag="U1041_000538"
     CDS             6882..7835
                     /locus_tag="U1041_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4767666.1"
                     /translation="MNVSILALLISQMLIYSAPLIFTSLGGVFSERGGIVNVGLEGIM
                     VIGAFAGVVFNIEFAGTFGNATPLLAVIVGGLAGVVFAAIHAMATINFRADHVVSGTV
                     LNLLAPALGVFLVKVIYNKGQTDSITESFGKFSFPILADIPIIGEIFFKNTSLMGYVA
                     IATAFLAWFILYKTKFGLRLRSVGEHPQAADTLGINVYAMRYAGVLIAGFLGGVGGAV
                     SAQSVNINFSATTIVGSGFIALAAVIFGKWNPIGAMLASLFFGLSQSLAVVGGQLPGL
                     KDIPTVYLQIAPYLITVIALSAFFGKAVAPKADGINYIKSK"
     gene            7889..8521
                     /locus_tag="U1041_000539"
     CDS             7889..8521
                     /locus_tag="U1041_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEM4767667.1"
                     /translation="MSYSKEEELEGLLVENRKNDWYNSLSLRYEMRLIVRRLVLNIAM
                     SLDGFIARKDGSYDWIEGHGTDKYDTVLQFDNQKFFNNCDTVVMGRKSLEDCPLEMIE
                     GYQEKQFIVASHTEQTDYGNVRFVRDIIGEIMELRSREGGDIWLFGGASLAQDCLEAG
                     VIDHLIIGIIPTILGDGILLFASLLEEKKLLLVESTVTDGIAMLRYDIRR"
     gene            complement(8564..9547)
                     /locus_tag="U1041_000540"
     CDS             complement(8564..9547)
                     /locus_tag="U1041_000540"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003050541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM4767668.1"
                     /translation="MTATKQHKKVILVGDGAVGSAYAYALVNQGIGQELGIIDINKDR
                     TQGDAEDLSHALAFTFPKKIYSAEYSDAHDADLVVLTAGLPQKPGETRLELVEKNLRI
                     NQQIVTEIVNSGFNGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQAL
                     AEKIGIDARSVHAYIMGEHGDSEFAVWSHANVAGVKLYDWLQDNRDIDEQGLVDLFVS
                     VRDAAYSIINKKGATYYGIGVALARITKAIFDDENAVLPLSVYQAGQYEGVEDVFIGQ
                     PAIIGAHGIVRPVNIPLSEAELQKMQASAKQLKDIIDDAFANPEIAAGVKN"
     gene            9736..12180
                     /gene="gyrA"
                     /locus_tag="U1041_000541"
     CDS             9736..12180
                     /gene="gyrA"
                     /locus_tag="U1041_000541"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003244540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEM4767669.1"
                     /translation="MQDKNLVTVNLTNEMKSSFIDYAMSVIVSRALPDVRDGLKPVHR
                     RILYGMNELGITPDKPHKKSARITGDVMGKYHPHGDSAIYEAMVRMAQWWSYRHMLVD
                     GHGNFGSMDGDGAAAQRYTEARMSKIALEMLRDINKNTVNFADNYDASEREPEVLPAR
                     FPNLLVNGTTGIAVGMATNIPPHNLGETIEAVKLVIDNPEVTTREIMEVLPGPDFPTG
                     ALVMGKSGIHRAYETGKGSIVLRSRTEIEEYGNGRERIVVTEFPYMVNKSKVQEHIVK
                     LVQEKRIEGITAVRDESNREGVRFVIEVRRDASANVILNNLFKQTQLQTNFSFNMLAI
                     QNGVPKILSVRQILESYIEHQKEVVTRRTRFDKEKAEARAHILEGLLIALDHIDEVIR
                     IIRNSETDAIAQAELMEKFDLSERQSQAILDMRLRRLTGLERDKIQSEYDELVALIAD
                     LADILAKPERVVQIIKDELEEVKRKYADPRRTELMVGEVLSLEDEDLIEETDVLITLS
                     NQGYIKRLAQDEFQAQKRGGRGVQGTGVKDDDFVRELVSTSTHDRLLFFTNKGRVYRL
                     KGYEIPEYGRTAKGLPVVNLLKLEENEAIQTIINVTKDQEADSYLFFATRQGVVKRTS
                     VSEFANIRQSGLKALNLKEDDELINVFLTNGQADIIMGTKLGYSVRFTETDVRNMGRT
                     ATGVRGINLREGDQLVGATMISDDQEVLVLTEKGFGKRTPASEYPTKGRGGKGIKTLK
                     VAEKNGSLAGLTTVSGDEDIMVITDTGVIIRTSVANISQTGRSTMGVKVMRLNDEAKI
                     MTFALVDAAEIKEEKE"
     gene            12187..12936
                     /locus_tag="U1041_000542"
     CDS             12187..12936
                     /locus_tag="U1041_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase"
                     /protein_id="HEM4767670.1"
                     /translation="MSKRENKKKRKGSFWRNLLTVVLILISLALIFNTSIRNFIIGWN
                     TNKYQISNVTTEDIEKNKQAETTFDFDQVQSISTEAILAAQWDAQRLPVIGGIAVPEL
                     GINLPIFKGVFNTSLMYGAGTMKENQEMGKGNYALASHHIFGVTGAADVLFSPLDRAK
                     NGMKIYITDKTNVYTYVIDSVEIVSPESIYVIDDVEGRTEVTLVTCTDYNATQRIIVK
                     GVLESTTPYNETAKDILDSFNKSYNQYDYGQ"
     gene            13049..13729
                     /gene="radC"
                     /locus_tag="U1041_000543"
     CDS             13049..13729
                     /gene="radC"
                     /locus_tag="U1041_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEM4767671.1"
                     /translation="MYQIEFKEEAILPRERLVEVGAERLSNQELLAIFIRTGTKKEPV
                     SILSNKLLNRLESLAALRELSIEELQSLTGIGRVKAIEIKAMIELGKRINQSELLLNE
                     RILGSEKLGRKMIHEIGHKKQEHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILH
                     YAVKCMATSIIIVHNHPSGSVQPSRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYS
                     FREESELF"
     gene            complement(13726..14418)
                     /locus_tag="U1041_000544"
     CDS             complement(13726..14418)
                     /locus_tag="U1041_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEM4767672.1"
                     /translation="MKKPVIGISGNEYKTGDHTEPLLSYTQTCLVQAIEDAGGLPLIL
                     PATEPDLAKYYIHLIDKLILTGGQNVQPSYYHEERTIDSDNYLPKRDEFELALIRAAQ
                     EDQKPIFGICRGLQLYNVAQGGSLHQSISDHWQDIDGQEVSQTIQLTQNSPLYDIYES
                     DPSVNSFHRQAIKDLASDLEIIALSDNQQIIEAVHSAYPTKFLGVQWHPELLYGKREI
                     EKDLFHYIVNKL"
     gene            complement(14422..15060)
                     /locus_tag="U1041_000545"
     CDS             complement(14422..15060)
                     /locus_tag="U1041_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HEM4767673.1"
                     /translation="MKNDKKSDIPRATAKRLSLYYRIFKRFYAGNIEKASSKEIAEAI
                     GIDSATVRRDFSYFGELGRRGFGYNVKELMDFFADILNDTSITNVMLVGVGNMGRALL
                     HYRFHERNKMKIVMAFEADDNPAVGTTDENIPIHAISEIKERISEANSQTAILTVPSV
                     KAQEVTDILVEAGVKGILSFSPVNLSVPKDVVVQYVDLTSELQTLLYFMRKG"
     gene            complement(15195..15398)
                     /locus_tag="U1041_000546"
     CDS             complement(15195..15398)
                     /locus_tag="U1041_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4649 family protein"
                     /protein_id="HEM4767674.1"
                     /translation="MIEIHYLDAYKQERIQTFENKDAAILAFAGCLTLPDYYPVTNIT
                     QDGQALDYKGTIGDLYRYLQTLD"
     gene            complement(15400..15744)
                     /locus_tag="U1041_000547"
     CDS             complement(15400..15744)
                     /locus_tag="U1041_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1831 domain-containing protein"
                     /protein_id="HEM4767675.1"
                     /translation="MAFQQSVTLKDCNFTYHISPAIKKYTLRDNTFEQTKAGHYQLTR
                     LLEEIPNSNQGFLLKIIINQDLTGFKINITDKSGLHLVNIFKPESNKVIQEKFYFLMD
                     SLIDRDIFTKEA"
     gene            complement(15746..16861)
                     /locus_tag="U1041_000548"
     CDS             complement(15746..16861)
                     /locus_tag="U1041_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM4767676.1"
                     /translation="MIYLDNAATTALSPTALQRMMEVAQENYGNPSSIHQSGRKANQC
                     LRQSRQEIAQILSASPEQIIFTSGGSEADTLAIQGYALAHQSKGKHLITTAIEHHAVL
                     HTMQYLEDRFGFEVTYIQPVDQVITAQQIQDALRPDTILVSVMFANNETGQLLPIKEI
                     GKLLANHQAVFHVDAVQAIGKIAISPSDYGIDLLAASAHKFHGPKGMGFLYSKVHKFD
                     SLIHGGKQEQQHRAGTENLPAIAAMATALTEQYESLDTHHKHVSELRQHIIEGLSSLD
                     YYLNQTGPHLPHVLNIGFPGKLNEQLLMQLDLAGIAVSSGSACTAGVVQNSHVLEAMY
                     GKDSHRLKESIRISLSEINTKEEIDTLIIELKKILGG"
     gene            complement(16872..17849)
                     /locus_tag="U1041_000549"
     CDS             complement(16872..17849)
                     /locus_tag="U1041_000549"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HEM4767677.1"
                     /translation="MVQPLGEHNIKLFSLNSNRDIAEKIADSAGIPLGKLSSRQFSDG
                     EIQINIEESVRGVDVYIIQSTSYPVNNHLWELLIMIDACKRASANTITAVIPYFGYAR
                     QDRTASPREPITAKLVANMLVKAGVDRVLTLDLHASQIQGFFDIPVDNLLTEPLFAAY
                     YMEKGLCGEDVVIVSPKNSGIKRARNIAEFLNAPIAIIDYAQDDSERSEGYIIGDVAG
                     KKAILVDDILNTGRTFSQASKIVQEGGATEIYAVASHGLFAGTAAQLLDEAPIKEILV
                     TDSVASKEQHPKNIAFLTASDLIADAIHRIQEHQPLSPLFKFTSPEKEN"
     gene            complement(17994..18560)
                     /locus_tag="U1041_000550"
     CDS             complement(17994..18560)
                     /locus_tag="U1041_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEM4767678.1"
                     /translation="MKNHLEIEYKTLLTKSEYKRLLTDFSDVSPILQTNHYIDTPDLD
                     MKNHRFSLRIRTFEDSAELTLKIPQEVGNQEYNQVLDIQTAHDLLENFQLPAGQISDI
                     ISATEIPLDKLAVWGSLTTKRYEKQTSIGLMALDENDYVGQKDYELEVEVTDADAGKI
                     LFDEFLKKKSIQFKYASSKVARTADHMK"
     gene            18647..19318
                     /locus_tag="U1041_000551"
     CDS             18647..19318
                     /locus_tag="U1041_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HEM4767679.1"
                     /translation="MDFNWEEFLDPYIQTVGELKIKLRGIRKQYRKANRHSPIEFVTG
                     RVKPIESIKEKMALRHIKLENLAQDMQDIAGLRIMVQFVDDIEEVLAILRKRKDMQIV
                     HERDYINNMKASGYRSYHVVIEYPVDTINGNETVLAEIQIRTLSMNFWATIEHSLNYK
                     YKGNFPEEIKKRLEVTAKIAYELDEEMRKIRNDIQEAQALFDPAYRKLNDGVGNSDDT
                     DEEYR"
     gene            19293..20120
                     /locus_tag="U1041_000552"
     CDS             19293..20120
                     /locus_tag="U1041_000552"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEM4767680.1"
                     /translation="MIQMKNTGRKKIALLASRNPKSEVVSKELWTKLKEANFILTPKN
                     PDIVISIGGDGMLLSAFHKYEKLIDRVRFVGIHTGHLGFYTDYRDFEVDKLIENLKLD
                     TGARVSYPILNVKVKMTDGRIVEARALNEATVKRLSKTMVADIIINNVPFERFRGDGI
                     SVSTPTGSTAYNKSLGGAVLHPTIEALQIAEVASLNNRVYRTLGSSVVVPKKDKIVIE
                     PKHSDRYSIAVDNKTFVYDSIESIEYQIDNSKIHFVATPSHTSFWNRVKDAFIGEVE"
     gene            20120..21013
                     /locus_tag="U1041_000553"
     CDS             20120..21013
                     /locus_tag="U1041_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM4767681.1"
                     /translation="MRFEFIADQHTKIKTFLKKHGVSKGLLAKIKYTGGNIWVNDIER
                     NATYLLDIGDRVTIDIPAEEDLTGSLKPIFFPLDIVYEDDHFLAINKPVGYASIPSAL
                     HSSTIANFVKGYLIEQNYENKQVHIVTRLDRDTSGVMLFAKHGYAHARLDKQLQAKLI
                     HKRYYALVKGNGQLEETGDIIAPIGRPEDSIITRCVTKNGKYAHTSYRVVQSWGDIHL
                     VDIQLHTGRTHQIRVHFSHIGFPLLGDDMYGGSLECGIERQALHCHNLAFDNPFTAER
                     IDLEAPLPEDFQAVINQLISK"
     gene            21031..22005
                     /gene="pta"
                     /locus_tag="U1041_000554"
     CDS             21031..22005
                     /gene="pta"
                     /locus_tag="U1041_000554"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEM4767682.1"
                     /translation="MKIFEQLATKLEGKKVRIVLPEGEEPRILQATKRLVNESDVVPV
                     LLGNPDRIKIYLDIEGITEGFEIIDPAHYDRYDEMVAALVERRKGKVSEEQAHELLKD
                     VNYFGVMLVYMGVVEGMVSGAIHSTASTVRPALQIIKTEPGVSKTSGAFLMVKGEERY
                     IFGDCAINIDPDAQTLAEIAINSARTAKMFGIDPKVAMLSYSTKGSGAGPKVDKVVEA
                     TKIAQKLRPELDLDGELQFDAAFVPTTGKLKAPGSSVAGQATVFIFPGISAGNIGYKI
                     AERMGGFAAVGPVLQGLNQPVNDLSRGCNPDDVYNLTLITAVQALEHR"
     gene            22007..23746
                     /locus_tag="U1041_000555"
     CDS             22007..23746
                     /locus_tag="U1041_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767683.1"
                     /translation="MKFLSRYFKDYIKESILGPVFKLLEACFELLVPLIIAYIVDTII
                     PNGSQGNLVAMLFLLVGIACIGIIVSLIAQYYSAKAAVGVTKELTNDLYQKVLSLPKS
                     SRDILSSSSLLTRLTSDTLQIQTGINTFLRLFLRAPIVVFGSLIMAFYISPSLSAYFL
                     GMIILLIFIVTVISVMTSRIYQSMRKELDGLVGQVRETVTGWRVIRAFGQREREIKAF
                     QGINQIYKKQQLQAGFWSSLLSPLTFLVVNGTLLILIWQGNIAISHKLLEQGMLVALI
                     NYLLQILVELVKMIMVVSTLNQTYISAQRIQEVFDQTSEEVESSLPKVVSEDKEIIFS
                     VRHLSFSYPKSAEESLSDITFDLRKGQFMGIIGGTGSGKSTLVDLLQALYSVPTNQLS
                     LFNDGKSPKNLKEWRQQIAVVPQQAQLFAGTIRSNLSLGLEEISDSDLWSALEIAQAK
                     SFIEDKGGLDSPVEAFGKNFSGGQRQRLTIARAILQKAPILILDDATSALDYLTESRL
                     LVAIRQELPGQNLIMVSQRTNSLRTADQILVLEQGRQVGLGRHEDLLRSSAIYQEIHQ
                     SQQQGEEDSYETI"
     gene            23733..25475
                     /locus_tag="U1041_000556"
     CDS             23733..25475
                     /locus_tag="U1041_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767684.1"
                     /translation="MRQSSFKELVRLVLHQPLRMSLMLVGTLVQVLLTVYLPILIGQA
                     VDAVLIANGQVLLGILGKMVMVILLNTLMQWYLPLVTNRLVYGMVADLREQVYVKLHQ
                     MPLSYLDRQSVGDLVARFSSDSEQLTNGLLMIFNQFFIGILTIFLTIFTMARLDLTMM
                     LLVVALTPVSLLVARYIAKKSYGYYRQQTQARGRQSQLLEESISQLTLVQSFNAQEQF
                     TQGFQVVNDRYATYSQQAIFASSTVNPSTRFINAIIYALLAGLGALRIMAGNFTVGSL
                     TTFLNYASQYSKPFNDISSVLSELQSALACADRLFAILALDSIDDQAERKIDSEELKG
                     AISFDNVSFSYSPDRSLIEHLDIDVKAGQKVAIVGPTGAGKSTMINLLMRFYDVTAGQ
                     ILLDGVPISQYGREDLRRQIGMVLQETWIKSGTIHDNIAYGYPNATRELVIEAAKAAN
                     ADFFIRQLPQGYDTVLADGGEGLSQGQRQLLSIARVFVKIPKILILDEATSSIDTRTE
                     ILVQEAFAKLMEGRTSFIIAHRLSTIQSADLLLVMVDGKIVEQGNHEALMAEQGVYYQ
                     MQTSQQTEEDESVR"
     gene            25459..25851
                     /locus_tag="U1041_000557"
     CDS             25459..25851
                     /locus_tag="U1041_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEM4767685.1"
                     /translation="MKVLDKLNLQPITVLDDYQATMLNEKEVLLTTQVTEKSLNPYGM
                     AHGGFLFTLADSVAGLTTVARGSYSVTLQSNIHYMKAAKLGDTLSVIGSCTHDGSRTK
                     VVEVKIENQDKQLLASASFTMFVTGKVE"
     gene            26017..27177
                     /gene="mutY"
                     /locus_tag="U1041_000558"
     CDS             26017..27177
                     /gene="mutY"
                     /locus_tag="U1041_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEM4767686.1"
                     /translation="MLDLKEYGIEMWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPY
                     AIWVSEIMLQQTRVDTVIPYYERFLHHLPTISDLAQAPEEVILKLWEGLGYYSRVRNM
                     QKAAQQMVEDFDGQFPTTHAAISSLKGIGPYTAGAISSIAFNLPEPAVDGNVMRVLSR
                     LFEVDYDIGLPANRKIFQAMMELLIDPERPGDFNQALMDLGSDIESPVNPRPQDSPVK
                     AFSAAYLNGTMDKYPIKAPKKKPIPVAYQGFLIRNKDNQFLLEKNNEAGLLSGFWSFP
                     LLEKGAIVDKQVSLFEVAEEVVQPDIRQSFTELYGLTVDWQEQEFGIVQHIFSHRKWQ
                     IEMVEGVAETLNLPESKELKWVSVEDFPTYPFAKPQQKMWENFIKEKEKQKS"
     gene            complement(27860..28660)
                     /locus_tag="U1041_000559"
     CDS             complement(27860..28660)
                     /locus_tag="U1041_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767687.1"
                     /translation="MILGDILKEYRSKNKLSMDKFAELSGLTKGYISMLEKNQHPKTK
                     KALLPTMDTLEKVAKGMAISVGELIEQLDSNQDIALTITPSQFKLFQQPIHPEVQTLD
                     NELKGDFHAQWLTFGQEQLAAMQTASVTPSASILHLDDYRERIELPVPGKVSAGTGYW
                     QDTDMNNLVSFYNDEIPDNQSYDTIAQVVGDSMAPHIEDGDYLFIRLAPHIPLNTIGI
                     FSVNGENFVKKFKGDYLQSLNSDYDDIYFSPEDDIRPIGQVVDIYSPD"
     gene            28885..29427
                     /locus_tag="U1041_000560"
     CDS             28885..29427
                     /locus_tag="U1041_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767688.1"
                     /translation="MFGLVAKKTGVKEVEEYWASTLVDMGICDVEDNLSGCCWRCKSS
                     FAVSACQIVNKIWPLSYSLSNKMVLCQSCQIEKPLVKNPDLVWNWLENESGQLFWAKQ
                     GMSEYERRYEKSVLQELWDMGIRNSSEVESLVERVLKSVRINCQIINQSTLANVFRSE
                     IILMQKEMMENFEENNGYAS"
BASE COUNT         8638 a         5193 c         6679 g         9003 t
ORIGIN      
        1 tattttttat gtaagaaaaa ctcttgaaaa cgtttttagg aaatgttata ataagtacat
       61 gtccaatatg tattacgaaa aaaatcctac agtagcacat gatattcatg aaatccacgt
      121 aaacttacta gacaccccaa tgtctttcat gacagatgca ggtgttttta gcaagaagat
      181 ggttgattat ggtagtcaag tgcttttaaa aacccttcat tttgaaaaag gggcatcggt
      241 gttggatgtt ggttgtggtt atggaccaat tggtttgaca cttgctaagg tgttcagcac
      301 caagacaaca ctgattgata ttaatagcag agctttggat ttagctacaa aaaatgctga
      361 gaggaatggt gttaccgcta aaatttatca atccaatatc tacgaaaacg tggacgaaac
      421 attcaatcat attgtttcaa atccacctat tcgggccgga aaatcggttg tacatgaagt
      481 aattgctggc gcttttcaac gcttagaggc aaacggaacc ttgaccattg tcattcaaaa
      541 gaaacaaggt gcaccgagtg ccaaggctaa gatggaagag gtgttcggca actgccagat
      601 aataaagaaa gacaagggtt actacatcct tgaaagtgtg agagaatgag agcagttgat
      661 ttaattcaaa aaaagcgtga tggcttagaa ctatcgtctg aagaaatcaa atggttgatt
      721 gatggatatg tagctgggac agtaccggat tatcaaatgt cagccttggc gatggcgatt
      781 tatttcaaag ggatgtcaac acgtgagatt tctgatttga caatgtctat ggttgcaacg
      841 ggtgaacaga ttgatttgtc tgcaattcca ggcatcaagg tagataagca ttctacaggt
      901 ggtgtcggag ataaggtcac actcatctta gcgccattgg tagcaagttt tgatattcca
      961 gttgcaaaga tgagtggtcg tggacttggt catactggcg gaaccttgga taagttagag
     1021 tcaatcaaag gataccagat tgaagttagt caagaagatt tcatcaagca agttcaagat
     1081 actggtgttg cagttatcgg acagtcagac aatcttgtca aagctgataa attgctctat
     1141 gcccttagag atgtgacagc aaccgttgac attattccac tgattgcaag ctcggtaatg
     1201 tctaagaaaa ttgccgcagg tgcggatgcg attcttctag atgtaacagt gggagaaggt
     1261 gccttcatga agaccgttga agaagcacgg gttctagctc aaaccatggt ggaccttggc
     1321 aaggcggttg gacgtaagac agttgcagtt ttgactgaca tgtctcaacc agttggaact
     1381 tcgattggaa atcgtttgga aattttagag gctattgaaa ttttacaggg taaaggtcga
     1441 gaagatgtta ccgaatttat ctgtgaacta gcccaaatta tgttggggct tgcaaatgtt
     1501 gagaaaagca ttgaagaagt acgccaacat attgacaatg gtgcagcttt gaagaaattt
     1561 gaagagatgg tccttgctca aggtggtgac ttagaagatt tatatcgtcc agttcaggtt
     1621 acacagcaag ttccagttct tgcggaggag gatggatacc ttgtagggct tcctgcgttg
     1681 gaattcggtc tctttgcaat gaaacttggt gcaggtcgcg cagtcaagac agacgattta
     1741 gattatgaaa caggtattgt cttccataag aaagtagggg aagctgtttc taagggtgaa
     1801 caaatcgcaa cgatttatgc caatgaaaat atttcggaaa acatgcttac aaatttccaa
     1861 aaaaatgtta aaatagataa agaaagtgta aaaacgaaag aaatcataga gattatttct
     1921 taatatacgg agaaaactat gaaattgaat aaatatattg accatacaat cttgaaacct
     1981 gagacaacac aagagcaggt tgaaaagatt ttggcagaag caaaagaata tgattttgca
     2041 agtgtctgtg ttaacccaac ttgggtcgct ttagcagctg aaagcttgaa agatagtgat
     2101 gtaaaagttt gtacggttat tggtttccct ctcggagcaa acacacctgc tgtaaaagca
     2161 ttcgaaacaa aagatgcaat ttcaaatgga gcagatgaga ttgacatggt tatcaatatc
     2221 ggtgctctga aaactggaaa ttacgatttg gttttggagg atattaaagc tgttgtagca
     2281 gcaagtggtg ataaactagt caaagttatc atcgaagcat gcctccttac tgatgatgag
     2341 aaagtgaaag cttgtcaatt atctcaagaa gctggtgcgg actatgttaa aacatctaca
     2401 ggattttcta caggcggtgc cacagtagcg gatgttgcct taatgagaaa aacagtaggt
     2461 cctgacatgg gagtgaaggc ttcaggtggt gcacgttcgt atgaagatgc cattgccttt
     2521 atcgaagcag gagcgtctcg tattggtgcg tcatcaggcg tggcaatcat gaatggagca
     2581 caggcggatg gagactatta atttaattga attagctgta aaaaacagtc aaaaagcata
     2641 cgtaccgtac tcaaagtttc cagttagtgc agttcttgta gctaagacag gggaaatatt
     2701 tacgggtgta aatattgaaa atgcaagctt tggtttgacc aattgcgctg aaaggacagc
     2761 tattttcaaa gccatttctg aaggtgtgaa agatttttct gaaatcatta tttatggtga
     2821 aacagaaaag ccaatatctc cttgtggagc ttgtcgccaa gttatggcag aattttttga
     2881 taaggattta aaagtgacct tggtcgctaa agatcaatcg acagtcgaga tgacagtcgg
     2941 ggaattactt ccatattcct ttacagactt aacctagtct gtatgacagt catttgactg
     3001 tagcaatatt actctgcaac aatgtagttg caaaaagatt tttaggaggg ttcagaaatg
     3061 aacaagaaac ttgtaggact tggtctggca gctgttgcgg ctgtatcttt ggctgcatgt
     3121 ggtaaccgtg cttcaaaaag cagtagctca gaagcatctt catcagcgga cacatctgta
     3181 aaagctgcta tcgttactga cattggtggt gttgatgacc gttcattcaa ccaatctgca
     3241 tgggaaggtc ttcaagaatg gggtaatgca gctggtcttt ctaaaggtaa tggctacgat
     3301 tacttccaat cagctagtga atcagattat atcacaaacc ttgattcagc tgttgctggt
     3361 ggttacaatc ttgtgttcgg tattggtttt gccttggaga gtgcgattgc tgaggttgca
     3421 ccaaataatc ctgacacaca ctatgtaatc gtggatagtg ttgttccaga tcaagacaat
     3481 gtagtcagcg taggtttcgc agaccatgaa gcatcatatc ttgctggtgt tgctgcagct
     3541 aagtcaacta agacaaacca cgtaggtttc atcggtggta tggaaggtgt tatcatcgat
     3601 cgctttgaag ctggtttcgt tgcgggtgct aagtctgtaa acaaagacat caagattaca
     3661 attgactatg caggttcatt tggtgatgct gctaaaggtc aaactcttgc agctgctcaa
     3721 tatgctgcag gtgcagacgt gatcttccac gcttctggtg gtactggtaa cggtgtattt
     3781 gctgctgcta aagcagaaaa tgaaactcgt aatgaagcag ataaagtttg ggtaatcggt
     3841 gttgaccgtg accaatcagc agaaggtgaa tacacttcta aagatggtaa gtcttctaac
     3901 tttgtattgg cttcaacatt gaaacaagtt ggtacttcag ttaaagatat tgcaactaaa
     3961 gctgttgcag gtgaattccc tggtggtcaa gtacttcaat tctcattgaa agataaaggt
     4021 gttgaattgg cagaaactaa cctttcagaa gatgcttcta aagcagttgc agatgctaag
     4081 caagctatct tggatggtaa agtagaagtt cctgaaaaac cttaatgaat ttcttttcga
     4141 caattccgat tcggcgaccc gacggggtcg ccgttttcgg gctgagattt ttctcagtaa
     4201 agcctatcag ctatggtagg ttttactgac aaaaatggta tagttgatga agaattttca
     4261 gaaggctata gtcagaaagg ataatagatt atgactaagg attatgtcat tgaaatgcgc
     4321 aatatcacta agatatttgg tgaatttgta gcaaatgacc acatcaattt gaatgtcaga
     4381 cgtggtgaaa ttcatgccct tcttggtgag aatggtgcgg gtaaatctac tctgatgaac
     4441 atgcttgctg gcttgttgga acctacaagc ggtgaaattg ttatcaacgg tcaatccgtg
     4501 aagattgact ctccatccaa agcagcccaa ttggggattg gtatggtgca ccaacacttt
     4561 atgttggttg atgctttcac agttgctgag aacatcattc ttggttctga aaccaccaaa
     4621 ggtggcgtga ttgaccttaa aaaagctatc gcagaaatta aagaactttc tgctaagtat
     4681 ggtcttgaag ttgatccaac tgcaaaggtt gcagatattt ctgtaggtgc acagcaacgt
     4741 gtagaaatcc ttaaaacact ttaccgtgga gcagaccttt taatttttga tgagccgaca
     4801 gctgtattga cccctgcgga aattgcagag ctcttgaaaa ttatgaaagc cttggttgaa
     4861 gaaggtaaat ctattatttt gattacgcac aaattggatg aaattcgtgc agttgccgat
     4921 agtgtaacag ttattcgtcg aggtaaatca atcgaaacag ttgccgttga aggagcaaca
     4981 aaccaagatt tggctgagtg gatggttgga cgttccgttt cctttaaaac agagaaagtt
     5041 gaagcgagtc ctaaagaagt cattttgtca attaaggatt tggttgtcaa tgaaaaccgt
     5101 ggtattccag cagttaaggg cttgtcgctt gatgttcgag ctggtgaggt tgttggtatt
     5161 gccggtatcg acggaaacgg tcaaagtgag ttgattcagg caatcactgg tttacgtaag
     5221 gtaaaatcag gctcaatcac tatcaaaggt gaggaagtag ttggtaaaac tccacgtaaa
     5281 attacagaaa tgcaagtgag ccacgttccc gaagatcgtc atcgtgatgg actcgttctt
     5341 ccgatgactg ttgctgagaa ctttgcgctt caaacttact ataaagaacc gatttcaaaa
     5401 aatggtatct tgaactataa tatcattaat gaaaaagcac gcgcgttaat ggaagaattt
     5461 gacgttcgcg gggcgagtga actcgtccca atcaaggctc tttcaggcgg taaccagcaa
     5521 aaagctatca tcgcgcgtga aatcgatcgc aacccagacc ttttcattgt tagccaacca
     5581 acacgcggtt tggacgttgg tgctattgag tatattcgta agcgcctcat tgcagaacgt
     5641 gataagggta aggctgttct tgttgtcagc ttcgaattgg atgaaatttt ggatgtatca
     5701 gatagaattg ctgttatcca tgatggtgtc atccatggta ttgttgaacc tgctaagacc
     5761 aataaacaag agttaggtgt cttgatggca ggtggacata ttgagaaggg agaagaacat
     5821 gcttaataaa tataagaatt tggcccttcc attaatggct gtggtcagcg gtatcctact
     5881 tggagcgatt gtcatgcttg tttttggcta cgatccaatt tggggctatg aagagttatt
     5941 ctattcagct tttggtaata tcaaatcaat tggtgaaatt ttccgtgcaa tggcaccact
     6001 ggttttcact gctctcggtt tcgcagtagc tagtcgtgca ggtttcttca acgttggttt
     6061 gtctggtcag gcctatgttg gttgggtttt tgctggatgg tttgccttgg caaatcctga
     6121 cttaccacgt ccagttttga ttttgggaac agtcttgatt gctatgttgg caggcggtat
     6181 tgctggagct attccaggta ttctacgtgc ctatttggga acaagtgaag ttatcgttac
     6241 gattatgatg aactacatct tactctattc atgtaactat atcattcgtg atgtatttgc
     6301 tgatagtttg atgaagaata cagactcgac agttaacgtg tcagcaaatg cctcttacca
     6361 aacagagtgg ctccgtgcat tgacagataa ctcacgtatg aatattggta ttttctttgc
     6421 cattattgca gtttttgtga tttggttcct attgaccaaa acgactcttg gttttgagat
     6481 tcgctcagtg gggcttaacc caacagcatc ggattatgcg ggtatgtctg cgaaacgtac
     6541 gattattcta tctatggtta tttcaggtgc tcttgcgggt cttggaggag ctatccaagg
     6601 tttgggtact ttccaaaacg tttatatcca aagcggtaac ttggatattg gttttaatgg
     6661 tatgtcagta gcgcttttag cttctaattc accgttaggt attccattgg ctgcctttct
     6721 attcggtgtt ctttctgtcg gtgccccagg tatggtacgt gcacagattc cacctgaatt
     6781 gatcaacgtt gttacggcat caatcatttt ctttatcggt gtgaaattta tttttgaaca
     6841 attattaaaa tctagaaata aagcgaaagg agcgaaataa gatgaatgtt tcaattcttg
     6901 ccttactcat ttcgcaaatg ttgatttatt cagcaccctt aatctttacc agtcttggag
     6961 gagttttctc tgaacgcggt ggtattgtaa acgttggtct agaaggaatc atggttatcg
     7021 gtgcctttgc tggtgttgtt ttcaatatcg aatttgcagg gacatttggt aatgctactc
     7081 cattattagc tgttattgta ggaggtcttg ctggtgttgt ctttgccgct attcatgcga
     7141 tggcgacgat taatttccgt gcagaccacg ttgtatcagg tacggtgttg aaccttttgg
     7201 ctccagcatt gggagttttc ctagtcaagg ttatctataa taagggtcaa actgatagta
     7261 ttactgaatc atttggtaaa ttttcattcc ctatcttggc agatattcca atcattggtg
     7321 aaattttctt caaaaataca agcttgatgg gttatgtagc tattgcaaca gcatttcttg
     7381 cttggttcat cctttataaa accaagttcg gtttgcgcct tcgttcagta ggtgaacatc
     7441 cgcaggcagc ggatactttg ggaatcaatg tctacgctat gcgttatgca ggtgtgttga
     7501 ttgctggttt ccttggtggt gttggtggag ctgtaagtgc tcaatcagtg aatatcaact
     7561 tctctgcaac aacaatcgta ggttcaggtt tcatcgctct agcagctgta attttcggta
     7621 agtggaatcc aattggcgct atgctcgcca gtctattctt cggtctttcg caaagtttgg
     7681 cagtagtggg tggacaatta ccaggattga aagatattcc aacggtttat cttcaaattg
     7741 caccatattt gattactgtt attgctctgt ctgctttctt tggtaaagca gtcgctccta
     7801 aagcagacgg tatcaactat atcaaatcta aataaaaagg tccagtggac ctttttatca
     7861 tgttctttgc tgtacaggaa atgaataatt gtcctattca aaggaagagg agttagaggg
     7921 acttttggtt gagaatagga agaatgactg gtataatagt ttgtcactaa ggtatgaaat
     7981 gaggttaatt gtgagacgat tggtgttaaa tattgcaatg agtttagatg gatttattgc
     8041 acgtaaggat ggaagctacg attggattga aggacatggt accgataaat acgatacagt
     8101 cttacagttt gataatcaaa aattctttaa caactgtgat acagttgtga tggggagaaa
     8161 atcattagaa gattgtccgt tggaaatgat tgaaggatat caggaaaagc aatttatcgt
     8221 tgcgagtcat accgagcaga cggactatgg taatgtgcgt ttcgtaaggg acatcatcgg
     8281 ggagattatg gaacttcgtt ctagagaagg tggagatatt tggttgtttg gtggagcaag
     8341 tctggctcag gactgtttag aggcgggagt gattgatcac cttattattg ggattattcc
     8401 tactattttg ggtgacggta ttctactttt cgcctcactt ttggaagaaa agaaattgct
     8461 cttggtagag tcaactgtca cagatggaat tgctatgtta cgttatgata ttagaaggta
     8521 aaaaaggcga gctattgctc acctttttta ctattttata taattagttt ttaacaccag
     8581 ctgcaatttc tgggttagcg aaagcatcat cgatgatgtc tttcaattgt ttagcagatg
     8641 cttgcatttt ttgcaattca gcttcgctca atgggatatt gactggacga acgataccgt
     8701 gggcaccgat gatagcaggt tgaccgatga agacatcttc aacaccttcg tattggccag
     8761 cttggtaaac tgacaatgga agtactgcat tttcatcatc aaagattgct ttagtgatac
     8821 gtgcaagtgc aacaccgata ccgtagtaag ttgcgccttt tttgttgatg attgagtagg
     8881 ctgcatcacg aacagataca aacaagtcaa caagaccttg ctcatcaata tcgcggttgt
     8941 cttgcaacca gtcgtacaat ttcacaccag caacgttggc atgtgaccaa actgcaaatt
     9001 ctgagtcacc gtgctcaccc atgatgtaag cgtgaactga acgtgcgtcg ataccgattt
     9061 tctcagccaa tgcttgacgg aaacgagctg agtcaagaga agtaccagaa ccgataacac
     9121 gctctttagg gaaaccagag aatttccaag ttgagtaagt caacacgtca acagggtttg
     9181 cggcaacaag gaagataccg ttgaaaccag agttaacgat ttctgtaacg atttgttggt
     9241 tgatacgaag gtttttctct accaattcaa ggcgagtttc acctggtttt tgtggcaaac
     9301 cagctgtcaa tacaaccaag tctgcgtcat gagcatctga atactcagca gagtagattt
     9361 ttttagggaa tgtgaaggcc aatgcgtggc tcaagtcttc tgcatcacct tgagtacggt
     9421 ctttgttgat atcgatgata cccaattctt gaccaatccc ttggttaaca agagcataag
     9481 cataagcaga acctacggca ccgtcaccga caaggattac ttttttgtgt tgtttagttg
     9541 cagtcattgc taaacatctc cttagtttta tttggggatg acttcatccc gaccataata
     9601 cattctagca tgttttaagt tttttgtcac ttgtgaaagc gcgtttgaaa atgtttacat
     9661 gctagtttcc aacaaagaaa tttattcgcc aatatggtat aatagaagca caatgactgt
     9721 tgaaagaggc atataatgca agataaaaat ttagtaacgg ttaatctgac caatgagatg
     9781 aaatcatcct tcatcgacta tgcgatgagt gttatcgttt cacgtgctct gcctgatgta
     9841 cgtgatggtc tgaagccggt tcatcgccgt attttgtatg ggatgaatga attaggaatt
     9901 acaccggata aaccacataa aaaatcagcc cgtatcacag gggatgttat gggtaaatat
     9961 cacccgcatg gagatagtgc gatttacgaa gcaatggttc gtatggcgca atggtggagc
    10021 taccgtcaca tgttagttga tggtcacgga aactttggtt ccatggatgg cgacggagca
    10081 gccgctcagc gttatacaga agcacgcatg agcaagattg cgcttgaaat gcttcgtgat
    10141 attaacaaga acacggtaaa ttttgcggat aactatgacg cgagtgaacg tgagccagag
    10201 gttttacctg ctcgtttccc taaccttctg gttaacggaa cgactggtat cgccgttggt
    10261 atggctacca acattcctcc acacaacttg ggtgagacta tcgaggcagt taagctggtt
    10321 atagacaatc ccgaggtaac aacacgtgag attatggaag tcttgcctgg accagatttt
    10381 ccgacaggtg ccttggttat ggggaaatct ggaattcacc gtgcttatga aactggtaaa
    10441 ggttcaatag ttcttcgttc ccgcacagaa attgaagaat atggaaatgg tcgtgaacgc
    10501 attgttgtta cagagtttcc atacatggtc aataagtcca aggttcaaga acatattgtt
    10561 aaattagtcc aagaaaaacg tattgaagga atcactgctg ttcgagacga atccaaccgt
    10621 gagggtgtac gatttgttat cgaagttcgt cgtgatgctt ctgctaacgt tattttgaat
    10681 aacctattca agcaaacaca gcttcaaacc aactttagtt tcaacatgtt ggccatccaa
    10741 aatggtgtac cgaaaatcct ttctgtacgt cagattctag agtcttatat tgaacaccaa
    10801 aaagaagtag tcactcgtcg tacacgattt gataaagaaa aggctgaggc gcgtgctcat
    10861 atcttagaag gcttgctgat tgctcttgac catattgatg aagtcattcg cattatccgt
    10921 aattcagaaa ctgatgctat tgctcaagct gaattgatgg agaaatttga cctttctgaa
    10981 cgtcagagtc aggccattct tgatatgcgt cttcgtcgtt tgacaggttt ggaacgcgac
    11041 aagattcaat cagaatatga tgagttagtg gccttgattg cggatttggc tgatattcta
    11101 gctaagcctg agcgtgttgt tcagattatt aaagacgaat tagaagaagt caaacgtaaa
    11161 tatgctgacc cacgccgtac agaattgatg gttggtgaag ttctttccct tgaagatgag
    11221 gacttgattg aagaaacgga tgttttaatc accttgtcaa accaaggcta catcaagcgt
    11281 ttggcacagg atgagtttca agctcagaag cgtggaggac gtggggttca aggaactggc
    11341 gtcaaggatg atgattttgt acgagaatta gtctctacaa gcactcatga tcgcttgctc
    11401 ttcttcacta acaagggacg tgtctaccgt ctcaaaggct atgaaatccc agaatatggg
    11461 cgtactgcaa agggacttcc agtggtcaat ttgcttaaat tggaagaaaa cgaggcaatt
    11521 caaaccatta tcaatgtaac taaggaccag gaggcagata gctatctctt ctttgcaacc
    11581 cgccaaggtg ttgtaaaacg gactagtgtg tcagaatttg ccaatattcg ccagagcggt
    11641 ctgaaagctt tgaatttgaa agaagacgat gaactcatca atgttttctt aacaaatggc
    11701 caagcagaca ttattatggg gactaagctc ggttattctg tacgtttcac tgaaacagat
    11761 gttcgtaata tgggccgtac agcaacaggt gttcgtggta tcaatttacg cgagggagac
    11821 cagttagttg gcgctactat gatttctgat gaccaagaag tactcgtatt gacggaaaaa
    11881 ggttttggta aacgtacacc agccagtgag tatccaacca aaggtcgtgg tggtaagggt
    11941 atcaagactc ttaaagttgc tgagaagaat ggttctctgg caggtttgac aacggtatct
    12001 ggtgatgaag atattatggt tattaccgat actggtgtga ttattcgtac aagtgttgcc
    12061 aatatctctc aaactggtcg ttcaaccatg ggtgtaaaag tgatgcgctt gaatgatgaa
    12121 gcgaaaatca tgacctttgc cttggtagat gctgctgaaa ttaaagaaga aaaggaataa
    12181 atagtcatgt caaaacgtga aaacaagaag aagcgtaaag gttctttttg gcgcaatctt
    12241 ttaacagttg tattgatact gatttcccta gcgttgatat tcaacacctc tatccgtaat
    12301 tttattattg gctggaatac gaataaatac cagattagca atgttacgac agaggatatc
    12361 gaaaagaata aacaggctga aacaacattt gatttcgatc aggttcagtc tatttctaca
    12421 gaggctattt tagcagctca gtgggatgca caacgcttac ctgtaattgg tggaattgcg
    12481 gttcccgagc ttggtatcaa ccttcctatt tttaaagggg tcttcaatac ttcgctcatg
    12541 tatggagctg gtactatgaa ggaaaaccaa gagatgggga aaggaaatta tgcgttggcc
    12601 agccaccata tttttggtgt aactggtgcg gcagatgttc tcttttcacc gcttgatcgt
    12661 gctaaaaacg gcatgaaaat ctatattact gacaagacca atgtttacac ctacgttatt
    12721 gatagtgtgg aaattgtttc gcctgaaagt atctatgtca ttgatgatgt agaaggacgt
    12781 acagaggtta cgttggtaac atgtacggac tataatgcaa cgcaacgtat cattgtaaaa
    12841 ggagttcttg aatcaacaac tccatataat gaaactgcaa aagacatctt agattccttc
    12901 aataagagtt ataatcagta tgattatgga caataaaaca tctatatatt aaggataaag
    12961 aagtggtata agactgggga gataatcttt ggttttatat ggcttctttt ttgcaagatt
    13021 ttacgaatag ataggtgagg aggaaattat gtatcaaatt gaatttaaag aagaggccat
    13081 tctacctaga gaacgtttag tagaagttgg agctgagcgt ctcagtaatc aggaactact
    13141 agcaattttt attagaactg ggacaaaaaa agaacctgtt tctattctct ccaataaatt
    13201 attgaatcgt ttggagagtt tagcggctct aagagaacta tcaattgaag aattgcaaag
    13261 tttgactggc attgggcgcg tcaaggcgat tgaaattaag gctatgattg aacttggaaa
    13321 acgtatcaat caatcagagc tactcttaaa tgagagaatt ttgggaagtg agaagttggg
    13381 acgtaagatg attcatgaaa tcgggcataa gaagcaggag cacctagttg cactttatct
    13441 caatacacag aaccagatta tcagtcaaaa aacgattttt attgggagtg ttaatcgtag
    13501 cattgcagaa ccacgtgaaa ttttgcatta cgcagtaaaa tgtatggcaa catcgattat
    13561 catcgttcat aaccacccgt cgggttcagt acaacctagt aggaatgatt tgctatttac
    13621 ggagaattta aaagagtcct gcgaaaagct aggactggta ttattagatc atttaattgt
    13681 tggaaataag gattactatt cttttagaga agaaagtgag ttattttaaa gtttattgac
    13741 aatatagtgg aagaggtctt tttcaatctc acgtttaccg tagagtagtt caggatgcca
    13801 ttgaacccct aaaaatttag ttgggtaggc tgaatgaact gcttcaataa tctgttgatt
    13861 atctgatagt gcaatgattt ctaagtcaga cgctaagtct ttgatagcct gacggtgaaa
    13921 tgagttcaca ctcggatcgg actcatatat gtcgtaaagt ggactatttt gagtcagttg
    13981 aatcgtttga ctgacttctt gtccgtctat gtcttgccaa tggtcagaaa ttgattgatg
    14041 aaggctacca ccttgagcta cattgtagag ctgtagacct cggcagatac cgaagatagg
    14101 tttctgatct tcctgggcag cccttatgag ggccaattca aactcgtcac gctttggtag
    14161 ataattatcg ctgtcaatag ttctttcttc gtgatagtaa cttggctgga cattttgtcc
    14221 tcctgttagg atgagtttgt caataagatg aatataatat tttgccaaat ctggctctgt
    14281 agcaggaagg atgagtggga gcccaccagc atcttcaata gcttgtacga ggcaagtctg
    14341 ggtataagaa agcaggggtt ctgtatgatc ccctgtttta tattcatttc cagaaatacc
    14401 aataactggt tttttcattg cttatccttt tcgcataaag tagagtagtg tctgtaattc
    14461 actagtcaaa tcaacatact ggacaacgac atcttttggg acagacaagt taactggtga
    14521 aaagctcaga attcccttga caccagcttc aacaagaata tcggtcactt cttgtgcctt
    14581 gacgctgggt accgttagaa tggctgtctg agagtttgct tcactgatac gttccttgat
    14641 ttctgagatt gcatggattg ggatattttc atctgtcgtt ccaacagctg gattatcatc
    14701 tgcttcaaaa gccatgacta ttttcatttt atttcgttcg tggaagcgat agtgtagcaa
    14761 ggcccgcccc atattcccaa cacctacaag cataacattg gtgatggagg tatcatttag
    14821 aatatccgca aagaaatcca tcaactcttt gacattgtag ccaaagccac gacgaccaag
    14881 ctctccaaaa taggaaaaat ctcggcggac ggtagccgaa tcgattccga tagcttcggc
    14941 aatttctttt gaactagctt tttcaatatt tcctgcatag aaacgtttaa aaatgcgata
    15001 atagagggat agacgtttgg cagtagcgcg tggaatatca gattttttat cgtttttcac
    15061 tttagactcc tttatttcga tagaatacgc tttatcgatt atttatatat taaacagttc
    15121 tttattctat tctagtccaa gtttgtgaaa aaatcaacag attgatttta aaaaaagatt
    15181 aaacaggaaa ctgtctaatc tagtgtttgt aaatagcgat agagatcccc gattgtccct
    15241 ttgtaatcca gagcttgtcc gtcttgtgta atgttggtaa ctggataata gtctgggagg
    15301 gttaagcaac cggcaaaagc cagaatggct gcatctttat tctcaaatgt ttggatacgt
    15361 tcttgcttgt aagcgtcaag atagtgaatt tcaatcatac taagcctctt ttgtaaagat
    15421 gtcacggtca atcaagctat ccatgaggaa atagaatttt tcttggataa ccttgttact
    15481 ttctggctta aaaatgttta ccagatgaag accagacttg tcggtaatgt taattttaaa
    15541 accagttagg tcttgattga taataatttt caagaggaat ccttggtttg aatttggaat
    15601 ttcttccaga agacgtgtaa gctgatagtg acctgctttg gtttgttcaa aggtgttatc
    15661 acggagtgta tattttttga tagcagggct aatgtgataa gtaaaattac aatcttttaa
    15721 ggtaactgat tgttggaatg ccattttaac ctccaagtat tttctttagt tcgatgataa
    15781 gagtatctat ctcttctttt gtattgattt cagataggct gatacgaatg gattctttca
    15841 gacgatggga gtcttttcca tacatagctt ctaaaacatg gctattttgg acaacacctg
    15901 ccgtacatgc agaaccgcta gaaacagcaa tacctgccaa atctagttgc atgagtagtt
    15961 gttcattaag tttaccagga aaaccgatat taaggacatg agggagatga ggtccagtct
    16021 gattgagata atagtctaag ctagacaacc cctcgataat atgttgtcgc agttcactga
    16081 catgcttatg atgcgtatct aaggactcat attgttctgt tagggcagtc gccatagcag
    16141 caatagcagg gagattctca gtacctgctc gatgttgctg ttcctgcttt ccgccgtgga
    16201 tcaaggaatc aaatttatga actttactat acaggaatcc cattcccttt ggaccatgga
    16261 atttatgggc agaggccgcg agcaagtcaa ttccgtagtc agagggagaa attgcaattt
    16321 ttccaattgc ttggacagca tctacatgaa agacggcctg atgattggct agaagctttc
    16381 caatttcctt gatgggaagt agctgaccgg tctcattgtt agcaaacatg acgctgacta
    16441 aaatagtatc tggccgaagg gcatcctgaa tttgttgagc ggtgattact tggtcgactg
    16501 gttggatata ggttacctcg aacccaaacc gatcctctag atactgcatg gtatggagca
    16561 cagcatggtg ttcgatagcc gtagtaatca ggtgttttcc tttggattga tgcgcaagtg
    16621 catagccttg aatagctaaa gtatcagctt cggagcctcc agatgtgaaa ataatttgtt
    16681 cgggagaggc ggagagaatc tgagcaatct cttgacgact ttgtctaaga cattgattgg
    16741 ctttccgacc gctttgatga atactggagg ggtttccata attttcttga gccacttcca
    16801 tcatccgttg gagtgcagta ggagatagag cagtggttgc tgcattatct aaataaatca
    16861 aagagttact cctagttttc tttttcagga ctagtaaatt tgaaaagtgg gctgagtggc
    16921 tgatgttctt ggatgcggtg gatggcatct gcaatcaagt cactagctgt taggaaggcg
    16981 atatttttgg gatgctgttc tttgcttgca acagaatcgg taactaatat ttctttgatt
    17041 ggtgcttcat ctaagagttg ggctgcagtt cccgcaaaga gaccatggct ggcaactgca
    17101 taaatttcag tagcaccacc ttcttggaca atttttgaag cttgtgagaa agtgcgacca
    17161 gtattgagaa tatcgtccac caaaatagct tttttaccag caacatcacc gataatatag
    17221 ccttcagaac gctcagaatc atcttgagcg tagtcgataa tcgcaatcgg tgcatttaga
    17281 aattcagcga tattacgcgc acgtttgata ccagaatttt taggactcac aatgacgaca
    17341 tcttctccgc agagtccttt ttccatgtag taggctgcaa aaagtggttc tgtaaggaga
    17401 ttgtctactg gaatatcaaa gaaaccttga atttgtgaag cgtgcaaatc aagagtcaat
    17461 acacggtcga caccagcttt aaccagcata tttgcaacta atttagctgt aattggttcg
    17521 cgtggagaag cggtacggtc ttgacgagca tagccgaaat aagggatgac cgctgtaatg
    17581 gtgttggcac tagcacgttt acaagcatcg atcataatca ataattccca caagtgatta
    17641 ttaaccggat agcttgttga ttggataatg tagacatcta cgccacgtac agattcttca
    17701 atgttaattt gaatctcacc atcagaaaac tgacgagaag acagctttcc aagaggaatt
    17761 ccagcagaat cagcaatttt ttcagcaata tcacggttgc tattgagtga gaataattta
    17821 atgttatgtt caccgagtgg ttgtaccatt ttaaagtaac tccttttaca cactgagctt
    17881 ttatgatgac ataaaagtat tttttacaat agatagctct attctatcaa aaaaatgaaa
    17941 aattttcagt agtgaaacta aaaaatcaac cttatttggc tgatttttta tagttatttc
    18001 atgtggtcag ctgttcgtgc gaccttacta ctagcatatt tgaattgaat tgatttcttc
    18061 ttcaggaatt catcaaaaag aattttccct gcatctgcat cggtcacttc gacttctaat
    18121 tcgtaatctt tttgtcccac ataatcattt tcatcgaggg ccataaggcc tatagatgtc
    18181 tgtttctcat agcgttttgt cgtgaggctt ccccagacag caagtttatc aagtggaatt
    18241 tcggttgcag aaataatgtc agaaatttgt cctgctggta gttgaaaatt ttccagtaaa
    18301 tcatgagcag tttggatgtc tagaacttgg ttatattctt gattgccgac ttcttgtgga
    18361 atttttaagg ttagttctgc tgagtcctca aatgtacgaa tacggagtga aaagcggtga
    18421 ttcttcatat ctaggtctgg ggtatcaatg tagtggtttg tttgaagaat tgggctcaca
    18481 tctgaaaagt cagtaagcag gcgtttgtat tcggatttgg tcagtaaggt tttatactca
    18541 atttcaaggt ggtttttcat gcagtaaacc ctttcaatgt gttataatag attagtcttt
    18601 gtgttattct aatacaattt aaaagttttg acaagaaagg ggccgtatgg actttaactg
    18661 ggaagaattt ttagacccct atattcagac agttggtgaa ttgaaaatca aactgcgggg
    18721 gattcgcaag cagtatcgca aggctaatcg gcattctcca attgagtttg tcacaggacg
    18781 ggtaaaaccg attgaatcca ttaaagaaaa gatggccctg cgacatatca aattggaaaa
    18841 tcttgctcaa gatatgcaag atattgccgg tcttcggatt atggttcaat ttgtggacga
    18901 cattgaagaa gtattagcta ttttgcggaa acgcaaggat atgcaaattg tgcatgaacg
    18961 ggattatatc aataatatga aagcctctgg ttaccgttca tatcatgtgg tgattgagta
    19021 tcctgtggat actataaatg gcaacgagac ggttctggca gaaatccaga ttcgaaccct
    19081 ttccatgaat ttctgggcta caattgaaca ttctctgaat tataaatata aggggaattt
    19141 tccagaagaa atcaagaaac gcttggaagt tacagcaaaa attgcctatg aattagatga
    19201 ggagatgcga aaaatccgca acgacattca agaagcgcag gccttatttg atcctgccta
    19261 tcgcaaactg aatgacggtg tgggcaacag tgatgataca gatgaagaat acaggtagaa
    19321 aaaaaatcgc tctgctcgct agtcgaaatc ctaagagtga agtggtgtcc aaagaattat
    19381 ggacaaagtt aaaagaagca aattttattt tgactcctaa aaatccagat attgtcattt
    19441 ctatcggtgg agatgggatg cttttatctg cttttcacaa atatgaaaag ttgattgatc
    19501 gtgtacgttt tgtaggaatt cacacgggtc atttggggtt ttatacagat tatcgcgatt
    19561 ttgaagtgga caagctgatt gaaaatctta agcttgatac aggtgctaga gtatcgtatc
    19621 cgattttaaa tgttaaggtc aagatgacag atggtcgcat tgtcgaggcg cgtgccttaa
    19681 atgaggcgac agtaaaacgt ctttctaaga ccatggtcgc agatattatt attaacaatg
    19741 tgcccttcga acgctttaga ggggatggaa tttcggtttc aacgccgaca ggctcaacag
    19801 cctataacaa gtcattaggt ggtgctgttt tacatccgac aatcgaggca ttgcagattg
    19861 cagaagtggc aagtttgaac aatcgtgttt accgcacctt gggttcatcc gttgttgttc
    19921 ctaaaaaaga caagattgtg attgaaccaa agcatagtga ccgttactcg attgcggtag
    19981 acaataagac ttttgtctat gatagtattg aaagtataga gtaccagata gacaatagta
    20041 agattcattt tgttgcaaca ccgagtcata ctagtttttg gaatcgggtt aaggacgcct
    20101 ttattggaga ggtggagtaa tgcggtttga attcattgct gaccagcata ctaaaataaa
    20161 aacttttttg aaaaaacacg gtgtctctaa aggcctatta gcgaagatta agtataccgg
    20221 tggcaatatt tgggtcaatg acatcgagcg caatgcaact tacttgctag atattggaga
    20281 tagggttaca attgacatac ctgctgaaga ggatttgact ggtagtttga agccgatttt
    20341 ctttccgttg gatattgtct atgaagatga tcattttctg gcgataaata agccagttgg
    20401 ctacgcctcc attccatctg ccttgcattc atccacaatc gcaaattttg taaaaggtta
    20461 tcttattgag cagaattatg agaataagca ggttcatatt gtgactcgtc tggataggga
    20521 tacatcaggc gttatgctgt ttgccaagca cggctatgcc catgcacgac tcgataagca
    20581 gttgcaggca aagcttattc ataaacgtta ttatgctttg gtgaagggga atgggcagct
    20641 agaagagaca ggggatatta ttgcccctat cggtcgtcca gaagacagca tcattacccg
    20701 ttgtgtgaca aagaatggaa aatatgctca tacttcctat cgtgttgtgc aatcgtgggg
    20761 agatattcat ttagtagata ttcaactaca tactggacgg actcatcaga ttcgtgttca
    20821 tttttctcac attggatttc cattgttagg agatgatatg tatggtggaa gtttagaatg
    20881 tgggatagaa cgtcaagcct tgcattgtca taatttggcc ttcgacaatc cttttacagc
    20941 cgaaaggatt gatttggaag caccgcttcc tgaggatttt caggctgtta tcaatcagtt
    21001 aataagtaaa taaatttaag gagtttgttc atgaaaattt ttgagcaatt agctacaaag
    21061 ctagagggta aaaaagtacg tatcgtattg ccagaaggtg aagaaccacg tatcttgcag
    21121 gctacaaaac gtttggtaaa tgagtcggat gtagtacccg tcttgcttgg aaacccggat
    21181 cgtattaaga tttaccttga cattgaaggg attacagaag gttttgaaat tattgaccca
    21241 gctcattatg atagatatga tgagatggta gctgctttgg tagagcgccg taaaggtaag
    21301 gtatcagaag agcaggcaca tgagttgttg aaagatgtta actactttgg tgttatgttg
    21361 gtatatatgg gcgtagtaga aggcatggta tctggtgcga ttcattcaac tgcttcaaca
    21421 gttcgtccag ctcttcaaat cattaaaaca gagccaggtg tatcgaaaac atcaggtgcc
    21481 ttcttgatgg taaaaggtga agagcgttat atttttggtg actgtgctat caacattgat
    21541 ccagatgctc aaaccttggc agaaatcgct atcaactcag cacgtactgc taaaatgttt
    21601 ggtattgatc caaaagttgc aatgctcagc tattctacaa aaggctctgg tgctggtcct
    21661 aaagtagata aggttgttga agctacaaaa attgctcaaa aattgcgtcc ggagttggat
    21721 ttggatggtg aattgcaatt tgatgctgcc tttgttccta ccacaggtaa attaaaagca
    21781 ccaggttcga gtgttgctgg tcaagcgact gtatttatct tcccaggtat ctcagctggt
    21841 aatattggtt ataaaattgc cgaacgtatg ggtggatttg cagcggtagg tcctgtttta
    21901 caaggtttga atcagcctgt aaacgacttg tctcgtggtt gtaaccctga tgatgtttac
    21961 aacttgacct tgattactgc ggttcaggct ttggagcacc gttaatatga aatttttatc
    22021 acgatatttt aaggactata ttaaggaatc catattaggt ccagttttta aactattgga
    22081 agcttgtttt gagcttttgg taccattaat tatcgcctat atcgttgata caattattcc
    22141 aaatggcagc cagggaaacc tggttgctat gcttttttta ctggttggta tagcatgtat
    22201 tggaattatt gtttcactaa tagcgcaata ttattcagct aaagcagcgg ttggagtgac
    22261 taaagagctg acaaatgact tgtatcagaa ggttctttcc cttcccaagt ctagccgaga
    22321 tattctttcc tcatccagtt tgctgacacg attgactagc gacactttac aaattcaaac
    22381 gggtattaat acttttcttc gtttgttttt acgtgctcca attgtcgtat ttggttcgct
    22441 catcatggca ttctatatta gcccaagtct atctgcctat tttctaggaa tgattatctt
    22501 attgattttt atagtgacag ttatttctgt tatgaccagc cgtatttatc aatcgatgcg
    22561 aaaagaatta gatggtttgg tggggcaggt acgtgagaca gtgactggtt ggcgagtgat
    22621 tcgtgcattt ggacaaagag agcgagaaat taaggctttt caaggcataa atcagattta
    22681 taagaagcaa cagttgcagg ctggtttttg gtctagtctt ttatcaccat taacattttt
    22741 agtggtcaat ggcaccttgc tcattctcat ctggcaggga aatatagcga tttcacacaa
    22801 attgttggaa caggggatgt tggtcgctct tattaactac cttcttcaaa ttttggtcga
    22861 attggtcaag atgattatgg tcgtgtctac tctcaaccag acctatatct cagcgcaacg
    22921 tattcaagag gtttttgacc aaacatctga ggaagtagag tctagtttgc caaaagtggt
    22981 tagtgaggat aaggaaatca tcttttctgt gcgtcatctt tccttttctt atccaaaatc
    23041 tgctgaggag tccctgtctg acattacttt tgacttacgt aagggacagt ttatgggaat
    23101 tatcggggga actgggtcag gtaagtccac cctagtagat ttattgcagg cactctattc
    23161 agtgccaaca aatcagctct ctctcttcaa tgatggaaaa agtcctaaga atttaaaaga
    23221 gtggcggcag caaattgccg tcgttccgca acaggctcag ctttttgctg gaactattcg
    23281 ttctaattta tctttaggat tggaagaaat atctgatagt gacctatggt ctgctttaga
    23341 aattgcacag gctaaatctt tcatagagga taaaggtggt ttggatagcc ctgtcgaagc
    23401 ctttgggaag aatttttctg gtggacagcg tcaacgtttg accattgcac gcgctatttt
    23461 acagaaagca ccgattttaa tcttggatga tgcgacctct gctctggatt atttgacgga
    23521 gagtcgatta ttagtggcta ttcgccagga attaccaggt cagaacttaa tcatggtgtc
    23581 acaaagaacc aatagtttac ggacagctga tcagatttta gtcttggaac aagggcgtca
    23641 agttggactt ggtcgccatg aggacttgct gagaagctct gctatttatc aagaaattca
    23701 ccaatcgcaa caacaaggag aggaggatag ctatgagaca atctagtttt aaggaactgg
    23761 tcagattggt tttacaccag ccccttcgaa tgtccttgat gttggtggga actttggtgc
    23821 aagtccttct gacagtttat ctgcctatct tgattggtca ggcagttgat gcagtattga
    23881 tagcaaatgg tcaggtcttg ctcggtatct taggcaaaat ggtgatggtt atcttgctta
    23941 atacgctgat gcaatggtac ttacctttgg taaccaatcg cttggtttac ggaatggtgg
    24001 ccgacttgcg tgaacaggtc tatgtgaagc tgcaccagat gcccctatct tatctggatc
    24061 gtcaatcagt cggtgatttg gtggctcgtt tttcaagtga tagtgagcaa ttaacaaatg
    24121 gtctcttgat gatttttaat caatttttca ttggtatcct gaccattttc ctaaccattt
    24181 tcactatggc taggcttgac ttgacgatga tgttgctggt tgtggcattg actccagttt
    24241 ctctgcttgt ggcacgctat atcgctaaga aatcctatgg ttattataga caacagactc
    24301 aggcacgtgg gaggcaatct cagcttttgg aagagtccat cagtcaattg acactggttc
    24361 aatctttcaa tgctcaagag caatttacgc aaggttttca agttgtgaat gaccggtatg
    24421 cgacctattc ccaacaggcc atctttgcct cttcaacggt caatccaagc acgcggttta
    24481 ttaatgctat tatttatgcc ttacttgcag gacttggagc gctgagaatt atggcaggaa
    24541 attttacagt gggctctctg acaaccttcc tcaattatgc tagtcagtac agcaagcctt
    24601 ttaatgatat ttcctcggtc ctatcggaat tgcagagcgc cttagcttgt gcagacaggc
    24661 tgtttgctat cttggctcta gatagcattg acgatcaggc tgagcggaaa attgattcag
    24721 aggagttgaa gggagctatt tcctttgaca atgtgtcttt ctcctatagc cctgaccgtt
    24781 ctctgataga acatctggac attgatgtca aagctggaca aaaagtagcc atcgttgggc
    24841 cgacgggagc aggaaaatct accatgatta accttcttat gcgtttctac gatgtgacgg
    24901 ctggtcagat tcttttagat ggggttccga ttagccaata cggtcgtgag gatcttcgca
    24961 gacagattgg gatggtttta caggagacat ggatcaaatc tggtaccatt catgataata
    25021 ttgcctatgg ctatccaaat gccacgcggg aattggtcat tgaggcggct aaggcagcta
    25081 atgcagactt ctttattcgt cagcttccac agggttacga tacggttttg gcagatggag
    25141 gagaaggctt atcccaggga caacgtcagc ttttgtctat tgcgcgtgtc tttgtcaaga
    25201 tacctaaaat cctgatttta gatgaggcga cttcctctat tgatacacgg acagaaattt
    25261 tagtacagga agcatttgcc aaattgatgg aaggacggac cagttttatt attgctcatc
    25321 gcctatcaac cattcaatca gctgacttgc ttttggtcat ggtggatgga aaaattgttg
    25381 aacaagggaa tcatgaagcg ttgatggctg aacaaggcgt ttattatcaa atgcaaacaa
    25441 gtcagcagac agaggaggat gaaagtgtta gataaattaa acttacaacc gattacggtt
    25501 ttagatgact atcaagctac aatgctcaat gagaaagagg tgctactgac tacacaggtg
    25561 acggaaaaat ctctcaatcc atacggtatg gcacatggag gctttctttt cacattggca
    25621 gattcagttg caggtctgac aacggtagca aggggttctt attctgtcac cctacagtcc
    25681 aatatccatt atatgaaggc agctaaactt ggtgatacct tatcagtaat aggctcttgc
    25741 acacatgatg gaagtagaac aaaggtcgtt gaagtgaaga tagaaaacca agataaacag
    25801 ctacttgctt cagcaagttt taccatgttt gtaacaggaa aagtagaata aaactcttcg
    25861 aacatcaaaa gcagacagtc ttggctagat ttagagaaac aaattcgttc gctctatttc
    25921 caacctccaa actttggagc tagtttgatt ttgattataa acgatataag ggagttggca
    25981 aaacctggct ccctttcttt gtgttatact agatgtatgt tagatttgaa agaatatgga
    26041 attgaaatgt ggccggagga aaagattcaa gcttttcgca aggcactctt agattggtat
    26101 gatgctaata aacgtgactt gccttggaga cggaccaagg atccgtatgc tatatgggtt
    26161 tctgaaatca tgcttcaaca gacaagagta gacacggtca ttccttatta tgaacgtttt
    26221 ctccatcatt tgcctacgat tagtgattta gcacaagcac cagaggaggt cattctcaaa
    26281 ctctgggaag gattgggcta ttattcgcgc gtgcggaata tgcaaaaggc ggctcagcaa
    26341 atggtagaag attttgatgg gcaatttccg accacgcatg cagccatttc aagcctaaag
    26401 ggcattggtc cttatactgc tggagcaatt tccagtattg cttttaattt gccagaacca
    26461 gcggtagatg gcaatgtgat gcgggttctc agccgcttgt ttgaggttga ttatgacatt
    26521 gggcttcctg ccaatcgcaa gattttccaa gcgatgatgg agctattgat tgatccagag
    26581 cgaccgggtg atttcaacca agccctgatg gatctgggat cggatattga atcgccagtt
    26641 aatccacgtc cccaggacag cccagtcaaa gcctttagcg cagcctactt aaacggtaca
    26701 atggataagt atccaatcaa agcaccaaag aaaaagccga ttcccgtggc ctaccaggga
    26761 tttctcatca gaaataaaga caatcaattt ttattggaaa aaaataatga agcaggtctt
    26821 ctatcaggtt tctggtcttt tccgcttttg gaaaaaggag caatcgttga caaacaagtc
    26881 tctctttttg aagttgcaga agaagttgtt cagccagata ttcggcagag ctttacggaa
    26941 ctttatggtc tgactgttga ttggcaagag caagaatttg gcatcgtcca gcacattttt
    27001 agtcaccgca aatggcagat agaaatggta gaaggtgtgg cagaaacact taaccttcca
    27061 gaatcaaaag aattgaaatg ggtttctgta gaagattttc ctacctaccc atttgctaag
    27121 ccgcaacaaa aaatgtggga aaactttatc aaggaaaaag aaaagcaaaa aagttgactt
    27181 tggagcacat aattatttga aagcgtttta taatagtggt ataatctatt tgaaaaaagg
    27241 aaatagttag ttaagatgtt gaacgccatc tgaattgctg aaaggagttc tttagcgttc
    27301 gtagaagtgt atatactatt agccatcttt ctctaataaa aagagaggga tgctagtagg
    27361 ggaaaagtcc gttatccctg ttttatatct atttgtgata tccattgtca aatgcgtagc
    27421 ataacttaca attagccttg ctacccagtt cactcaaaag taggctaaga atattcgtgt
    27481 cgtaactact atgtgttcaa gatgttgtaa cttttgaaca taaccttaga aaatcacaaa
    27541 aacctataga gaaaatcaca aaaacctcta gcgattttca tcataataag caatctccac
    27601 actttagaca aatagtaaga ggacaatcaa agacataagg gtagcagaat aattatttaa
    27661 tcattaactt gttgtcaaat aactatctgg taatggactt ttccaatttg acatataaaa
    27721 gggaggctgt catagcctcc ttttactgtg cttttcagtt tgttttcagt aggaaaaaac
    27781 gccagctata cgaacagact ttccaaaact agatggatga atgtagccaa tataactagt
    27841 gattaactag gcttagaaat caatctggac tataaatatc tacaacttga ccaataggtc
    27901 gaatatcgtc ttctgggcta aaatagatat catcatagtc agaattgagt gattgcaaat
    27961 agtcaccttt gaacttttta acaaaatttt ccccattgac tgaaaaaatt ccaattgtat
    28021 ttagaggaat atgaggagct aggcgaatga agagatagtc tccatcctcg atatgcggag
    28081 ccatagaatc tcccacaacc tgagcgattg tatcataaga ttggttatct ggaatctcat
    28141 cgttatagaa tgatacaaga ttgttcatat ctgtatcctg ccagtaacct gtaccggcag
    28201 aaaccttacc aggaacaggt aattctattc gctcccgata gtcatccaag tgaagaatag
    28261 aagcagaagg agtaactgag gcagtttgca tagctgctaa ctgttcttga ccaaaagtta
    28321 accattgtgc atggaaatca ccttttaatt cattgtccaa ggtttgaacc tctggatgaa
    28381 taggctgttg aaagagttta aattgggaag gagtaatcgt taaagctata tcctgattgg
    28441 aatctagttg ctcgattagc tcaccaaccg atatagccat gcccttagcg actttttcta
    28501 gcgtatccat cgttggcagg agagcttttt ttgttttggg atgctggttc ttttccaaca
    28561 tagaaatata accttttgtt aaaccagata attcagcgaa tttatccatt gataatttat
    28621 tcttgcttcg gtattctttt aaaatatcac ctaaaatcat ggttgtctcc ttatctgttt
    28681 aactaattat accattaaac aatatttttt gcaaattttg tttaacatgt ttgacaaaat
    28741 aaaaaattgg tggtaatata taagcataaa gatcaagtcg aatgaaaaaa ataaatttat
    28801 ttggactatt ttctagagct tattttaaat ttggcattct atcgactttt caaatttgat
    28861 tgattattaa aggagattat aaaaatgttt ggattagtag ctaaaaaaac aggagtcaaa
    28921 gaggttgaag aatattgggc aagtacttta gttgacatgg gaatttgtga cgtcgaagat
    28981 aatttgagtg gttgttgctg gagatgtaaa tcttcttttg ctgtatctgc ttgtcaaatt
    29041 gtcaataaaa tctggccgtt gtcctattct ttgtctaata aaatggttct ttgtcaatct
    29101 tgtcaaattg agaaaccttt agtaaaaaat cctgatctgg tttggaattg gcttgagaat
    29161 gagagtggtc aactgttttg ggcgaagcag gggatgtctg agtatgaaag aagatatgaa
    29221 aaatcagtct tgcaagaact atgggatatg gggattcgta acagttcaga agtcgaaagt
    29281 ctagttgaga gagtcttgaa atctgtgcga atcaattgtc aaatcatcaa tcaatccact
    29341 ttggctaatg tgtttcgttc cgaaattata cttatgcaga aggaaatgat ggagaacttt
    29401 gaagaaaata atgggtatgc tagttaagtt tgattttcga tatcttttta ttcaataagt
    29461 ctaggatatc actaatcttt attttgtgtg ccactgcatt aaattgataa agg
//
LOCUS       DASFQS010000013        28638 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.013, whole genome shotgun sequence.
ACCESSION   DASFQS010000013 DASFQS010000000
VERSION     DASFQS010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 28638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28638
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.013"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(86..742)
                     /locus_tag="U1041_000561"
     CDS             complement(86..742)
                     /locus_tag="U1041_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004256822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM4767689.1"
                     /translation="MSVKDFMTRKVVYISPDTTIAHAADIMREQDLHRLPVIENDKLV
                     GLVTEGTIAEASPSKATSLSIYEMNYLLNKTKVKDVMIKNVITVSGYASLEDAVYLMY
                     KNKVGILPVVDNGQLYGVITDRDIFAAFLHVSGYGEEGVRVRFLVENKAGELEKIIRL
                     VADKDYNIVSTVQLATKSGKVVIEVQIDGKVDVEEVRTLFEGAGIQVDSLVPTVAKNI
                     "
     gene            complement(826..1581)
                     /locus_tag="U1041_000562"
     CDS             complement(826..1581)
                     /locus_tag="U1041_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEM4767690.1"
                     /translation="MIKVEEILSTLSPNQKVNYDKVFQKMASTWQEAGLRPNILMHVC
                     CAPCSTYTLEYLTQYADVTIYFTNSNIHPKAEYQRRAAVTAQFVKEFNQKTGQSVGYL
                     EADYSPQEFFKKTQHLANEPEGGDRCKVCYDYRLDKTAEKAVELGFDYFGSALTISPH
                     KNSQTINAVGIEVQKLYDTQYLPSDFKKNGGYQRSVQMCEEYDIYRQCYCGCVYGANA
                     QGVNLVQVKKEALEFLKTHRDYSHIPFKVLDKN"
     gene            complement(2007..2717)
                     /locus_tag="U1041_000563"
     CDS             complement(2007..2717)
                     /locus_tag="U1041_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000062217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767691.1"
                     /translation="MAMLEVKNLSVNYGVIEAVKDVSFEVNEGEVVTLIGANGAGKTS
                     ILRTISGLVRPSAGTISFLGNEIQKVPARKIVADGLSQVPEGRHVFAGLTVMENLEMG
                     AFLRNNREENQANLKKIFARFPRLEERKNQDAATLSGGEQQMLAMGRALMSQPKLLLL
                     DEPSMGLAPIFIQEIFDIIQDIQKQGTTVLLIEQNANKALAIADRGYVLETGKVVLSG
                     TGKELLASEEVKKAYLGG"
     gene            complement(2717..3481)
                     /locus_tag="U1041_000564"
     CDS             complement(2717..3481)
                     /locus_tag="U1041_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767692.1"
                     /translation="MALLEVKDLTKNFGGLTAVGDVTMELHEGELVGLIGPNGAGKTT
                     LFNLLTGVYEPSEGTISLAGTILNGKAPSKIASLGLGRTFQNIRLFKNMTVLENVLIG
                     LGNHGKSEVFASFFRLPAFYKNEEALKTKAIELLKIFDLDGDADTLAKNLPYGQQRRL
                     EIVRALATEPKILFLDEPAAGMNPQETAELTQLIRKIKEEFGITIILIEHDMSLVMEV
                     TERIYVLEYGRLIAHGTPEEIRNNKRVIEAYLGGEA"
     gene            complement(3481..4428)
                     /locus_tag="U1041_000565"
     CDS             complement(3481..4428)
                     /locus_tag="U1041_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002914606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEM4767693.1"
                     /translation="MKQNLKVNAIWLAILLAGFGIIQGLVSAGILNFYYIQIVQQIGI
                     QIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAVGILGKMMPSYGGFAIALLVGMLVAG
                     GVALLVGLPTLRLKGDYLAIATLGVAEIIRILIINGGSVTNGAAGIMSIPLFTSWPLV
                     YIFVIITTLVTVNFLCSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIA
                     GGLHAGYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSYSD
                     ISMIIYSLALILLMIFRPGGLLGTKEFSVAALLKKKEVK"
     gene            complement(4431..5318)
                     /locus_tag="U1041_000566"
     CDS             complement(4431..5318)
                     /locus_tag="U1041_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEM4767694.1"
                     /translation="MLQQLVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGA
                     FMGYFLLNNLTFIADGGTRFFVALILAMVGTAILGVVIEFLAYRPLRNSTRIAALITA
                     IGVSFFLEYTMIKFFTADVKAFPQAIEAVTFNLGPVSVTNIQLIILGVSLALMVALQL
                     IVKRTKMGKAMRAVSVDSDAAQLMGINVNRTISFTFALGSALAGAAGVLLGLYYNQIE
                     PLMGMTPGLKAFVAAVLGGIGIIPGAALGGFVIGIIETFTYVIGLDTFRDAIVYAVLI
                     IILLVRPSGILGKNVKEKV"
     gene            complement(5514..6683)
                     /locus_tag="U1041_000567"
     CDS             complement(5514..6683)
                     /locus_tag="U1041_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4767695.1"
                     /translation="MKTRKFAVALATFASAALLAACGNVSTTNTSAAGSSVGDTFKIG
                     YNLELSGAVSSYGQTEEKGANLAVKEINAAGGIDGKKIEVITKDNKSETAEAATVATS
                     LASEGANVVIGPATSGASAASIPALTSAGVPMITPSGTQTNLVVNDKGEVQEYFFRTT
                     FTDGYQGQIMAKYATENLSAKKVVLYFDNSSDYGKGVAEAFKKAYTGEIVSEITFASG
                     DKDFQAALTKLKDKEFDAIIMPGYYNETGTIVKQARGLGIDKPILGSDGFDSPQFTEL
                     ATASAASNVYYLSGFVTSASEKAKAFYDAYKKEYNEEPSMFSALAYDSVYMAAKAAEG
                     AADSKALKDNLAALKDFEGVTGTMSVDKEHNVVKSVYVVGLTNGEESSVDTISID"
     gene            complement(6814..7086)
                     /locus_tag="U1041_000568"
     CDS             complement(6814..7086)
                     /locus_tag="U1041_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HEM4767696.1"
                     /translation="MFEKKNRTCLTVYLHYNRDARKLSQYGDIVYHSKRLRYVLVYMD
                     QELVEATILKLKKERFVKKVVPSYIKELDQNFVGNLWRDEEQSVVG"
     gene            complement(7213..7803)
                     /locus_tag="U1041_000569"
     CDS             complement(7213..7803)
                     /locus_tag="U1041_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEM4767697.1"
                     /translation="MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIA
                     QLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGTAASMGTIIA
                     SSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKILADNSGK
                     TVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK"
     gene            complement(7920..8549)
                     /gene="upp"
                     /locus_tag="U1041_000570"
     CDS             complement(7920..8549)
                     /gene="upp"
                     /locus_tag="U1041_000570"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002883819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEM4767698.1"
                     /translation="MGKFQVISHPLIQHKLSILRRTSTSTKDFRELVNEIAMLMGYEV
                     LRDLPLEDVEIETPITKTVQKQIAGKKLAIVPILRAGVGMVDGLLSLVPAAKVGHIGM
                     YRDEETLQPVEYLVKLPEDIDQRHIFVVDPMLATGGSAILAVDSLKKRGASNIKFVAL
                     VSAPEGVKALQEAHPDIDIYTAALDEKLNEKGYIVPGLGDAGDRLFGTK"
     gene            complement(8632..10248)
                     /locus_tag="U1041_000571"
     CDS             complement(8632..10248)
                     /locus_tag="U1041_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HEM4767699.1"
                     /translation="MPEIQKTDWWKKSVIYQIYPRSFQDSNGDGVGDIRGIISRLDYL
                     HELGIDAIWLSPVYQSPMDDNGYDISDYQGIAPEFGTMEDMEELIAEGHKRNIKIIMD
                     LVLNHTSDEHFWFQEALKGPDNPYYDYYVWADEPNELRSTFSGSAWEYVPHLNKYYLH
                     QFSVKQPDLNWKNPALKQEIWDMINFWIEKGVGGFRLDVIDLIGKEPEKLITADGPTL
                     HPLIQELNEKTFGAYDLVTVGETWSANPENAQLYSHPDRKEFSMIFQFEHVGLDQQEG
                     KEKWDLAPLDPARLHNVLSKWQTELVGKGWNSLFWNNHDLPRAISRFGDDRPAFRELS
                     GKMLAIYLHFMSGTPYIYQGEEIGMINTPITDISQADDIETRRMYAERIENGFTKEEL
                     ITSINAKGRDNARRPMQWTGAEGAGFSTGQAWLALGDTVKDINVEKALADKQSLFYTY
                     QKLIALRKEYPCMSEGKYEVMETRNSSVMAYRKYDEQDDFIILVNFTSEEQAYELSLK
                     DYSLFMHNYENGVNLDENVLRPFEAIVFKK"
     gene            complement(10321..11769)
                     /gene="gtfA"
                     /locus_tag="U1041_000572"
     CDS             complement(10321..11769)
                     /gene="gtfA"
                     /locus_tag="U1041_000572"
                     /EC_number="2.4.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HEM4767700.1"
                     /translation="MKIKNQAMLITYSDSLGKNLKDLKKVLEGPLKDVVGGVHILPFF
                     PSSGDRGFAPMDYTKVDPAFGDWSDIEVLSKDYYLMFDFMINHISAKSPYFLDFLEKK
                     DESAYADLFIRYKNFWPNGEPTQEDVDLIYKRKPRAPYRIATFADGSEEKVWCTFDEQ
                     QIDLDVTTETTRRFIQENLEQLAEHGASIIRLDAFAYANKKIGTNCFFVEPDIWEMLH
                     FPRQLLAPKDVEILPEIHEHYTIQQKIAEQDYYVYDFALPMLVLHALYSGHVNRLVHW
                     MEICPRKQFTTLDTHDGIGVVDVKDLLTDEETEETREALYAQGANVKKIYSTEAYNNL
                     DIYQINCTYYSALGNNDQAYLLARVLQCFAPGIPQIYYVGLLAGENDIELLESSKEGR
                     NINRHYYDLEEIEQEVQRPVVQSLFKLLKFRNTSPAFDGEFSVKMLDETSMEIFWNNQ
                     DAGVSARLTANLKEKSFEIVEIEEGKITTIEL"
     gene            complement(11839..12669)
                     /locus_tag="U1041_000573"
     CDS             complement(11839..12669)
                     /locus_tag="U1041_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4767701.1"
                     /translation="MNTQKQKNWWVYLVLFSGILFMFIPLLVTIISSFKPTKEITSNF
                     FGLPENFTLNNYERLFNDGIVQYFGNSALITIVAVGLILLVIPMAAFAVARQMKRQTV
                     FNFIYFFLIIGIFVPFQVIMLPMTKLMSSLGLNNIVGLIILYLTYAVPQALFLYVGYI
                     KTIVPEEMDEAAAIDGCDKFTMYWKIIFPLMKPMHATVLIINALWVWNDFLLPLLVLN
                     RDQSMWTLPLFQYNYQGMYFSDYGPSFASYVVGIIPILLVYLIFQKHIISGMTSGSVK
                     "
     gene            complement(12680..13552)
                     /locus_tag="U1041_000574"
     CDS             complement(12680..13552)
                     /locus_tag="U1041_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4767702.1"
                     /translation="MNQKGFIAKYWPYLFVAIPIGLQLIFFFYPLFTGIYYSLTDWNG
                     LTSDFNLIGVQNYLDILKNPDFYTSMTFTIIFTIGLVIGEIVIGIWLASLLNRKIKAV
                     GFFRTWYFFPAVLSTVTLGLIFVQLFNYGFTQIGEILHIDWLMENLLVQENTVIPAVI
                     FVALWQGLAMPVIIFLSGLQSIPEDVKEAAAIDGATRSQQFFNIELPFLLPSISMVFI
                     LAMKSGLTAFDLIFALTSGGPDGKTESLGLLVYNYAFVDNKFSYANALAVVLFIFIIV
                     ISLIQMRISKKFEI"
     gene            complement(13690..14925)
                     /locus_tag="U1041_000575"
     CDS             complement(13690..14925)
                     /locus_tag="U1041_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM4767703.1"
                     /translation="MKMKTFLKCASVCAFASFLVACGNASSSDKVEIEYFSQKPEMQA
                     TLQEIIDEFEKENPTIDVKFSNVPDAGTVLKTRMANNEAPDVINIYPQNADFKAYAAD
                     GRFLEIGDDAGLSHLKDGAVTPYLVNEKNYTLPLTANAYGIYYNKDKFKELGLEVPTT
                     YAEFVALVDKIKADGSAAPFALSLNDAWSLNGYHQLAWVTVAGGFDGAEDILIRSAKG
                     AIQDDATTKAVLERLQLLTDNGQKGATGALYADAVAAFAAGDALMLPQGTWAATAVNQ
                     QEPEFEYGMFTFPGDKEGGDYTIGAADLALSISADTEHPEESKKFLEYLSRPEVIQKY
                     YDVDGSPTSVEGVDTEGKFEETAGVTQYAFTDKHVVWLQSEWESEDEFWNITVEMVKN
                     PNSAELVKKLNAFFDPMKK"
     gene            complement(14939..17113)
                     /locus_tag="U1041_000576"
     CDS             complement(14939..17113)
                     /locus_tag="U1041_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HEM4767704.1"
                     /translation="MNVIEIYNEKQIFHLKTREFSYIIQVLETGDLVHRYFGKKIEKF
                     SDGNKITYLDRSFSPSPITGDRTYSLDVLPLEYSSNGLGDFRTSALDVRNEFGVTLDL
                     KYKEYRLYKGKKELRGLPASFGNQEEVESLEIDLYDQLTDITVTLQYSVFEEASYLAR
                     SATIQTGKYPCKLEKVLSATLDFPHQDFIVHSLAGRYAYEKEWTQTPLTKGQYSIGSI
                     RGASSHSRTPFLALASPDASEDKGDVYAAHLVYSGNFTAFVETTAMETSRLGLGLESH
                     YFSWQLDKDDRFQTPEVLLSYTDKGFTGMTQNSHHFITKHLIRSSFVNKPRPILINNW
                     EATYFEFTEEKILQLAQVASRAGIELFVLDDGWFGKRNNDESSLGDWKVNLDKLPNGL
                     NGLAERINELGMKFGLWFEPEMISIDSDLYREHPDWAIRTEGRLPIYSREQLVLDLTK
                     QEVCDYIIDSVSSILESANISYVKWDMNRNITNIPEGLANDQRFEFHHRYMLGLYRVL
                     DHLTKRFPDILFESCAGGGGRNDLGIMYYMPQAWASDDTDAIERLSIQEGTSLIYPSS
                     SIGAHVSAVPNHQVGRNTPLATRGNVAMMGGAFGYELDLTKLSEKELDEISQQIETYH
                     SIRETIQFGQLYRLKKTPNTWAANYVSQDKNQAVFTFVKILAKPEAPLLHVRLKGLDP
                     DALYECPQLGETFYGDELMNIGLTMPHVQNDYFSVQYIFNKI"
     gene            17218..18057
                     /locus_tag="U1041_000577"
     CDS             17218..18057
                     /locus_tag="U1041_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM4767705.1"
                     /translation="MNILNIYNELDSHNFDLNVDHYGAEQCDKGYSFGPTIRDNFVLH
                     FITNGKGKILVDGKTSYLAAGDLFILPKDVSIFYQADKNEPWTYIWVGFSGSRAKDLL
                     NQSQLLENYYLHSNLESPILGYMHQINHVQMHPIPSITELVLIGYLNQLLAALIEEFP
                     SETLIKPETQTKHYVQQAIKMIHNHYAHPIKVSEIADFLALSRSYLYKIFKQETGYSI
                     KDYILQVKMNRSCQLLEDASRSITEIAYSVGYQDPLTFSAAFKNYFHMSPTKFRKIQK
                     NKD"
     gene            complement(18089..19249)
                     /locus_tag="U1041_000578"
     CDS             complement(18089..19249)
                     /locus_tag="U1041_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4767706.1"
                     /translation="MTQYNFIDSPNRLSQHAEKWKKVEADPELLPLWIADMDFEPLPE
                     IRQVIRDYADHHVFGYPYASDSLYQSIIDWEDRQHGYKINRESILLIEGVVPALSVAI
                     QALTEEGDAVLINTPVYPPFARTVKLNNRQLVTNSLVEVDGVFRIDFDQLEKDIVENQ
                     VKLYIFCNPHNPGGRVWSKEELLAIGRLCQKHGVILVSDEIHQDLALYGHKHDTFNTV
                     DENFKDFSIVLSSATKTFNIAGTKNSFAIIENPSIRKTFAKRQLINNQHEIPTIGLLT
                     TEAAFTYGDEWLKELKVILERNIDFVEEYLATHTRIKVMKPQGTYLIWLDFSAYELEH
                     AELFDILHCKAKLILNDGLTFGKEGKHHARLNVAAPFDVIEEACQRLGKVFG"
     gene            complement(19253..20344)
                     /locus_tag="U1041_000579"
     CDS             complement(19253..20344)
                     /locus_tag="U1041_000579"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HEM4767707.1"
                     /translation="MTDYKIDTILAHTGINSDERTGALISPIHLSTTYQHPEFGQSTG
                     YDYTRTKNPTRASLETTLAAIEKADYALATSSGMAALVLLFNGFPVGSQVVAARDLYG
                     GSFRWFNEQESIGRFQFTYANTEEELIAAITEETDYVYLETPTNPLMVEFDIAKVSAI
                     AHAKGAKVIVDNTFYSPIYQNPLVLGADVVLHSATKYLSGHNDVLAGALMTNDQDLYD
                     KLFYDQNTSGPTLSPLDSYLLMRGLKTLSLRMERATQNAQKIVAYLEKSPAVKQVYYT
                     GKGGMISVKVVDESRIPHILNTLKVFTFAESLGGVESLITYPATQTHADIPAETRHSY
                     GLTDDLLRLSIGIEDAEDLIVDLKTALEG"
     gene            20547..20813
                     /locus_tag="U1041_000580"
     CDS             20547..20813
                     /locus_tag="U1041_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767708.1"
                     /translation="MKFQFNKHFYRYSAFYSLVFWSCFFLSDILLDSSQTPAWYSLLA
                     CLIILIHAIRTFFFKEEKELARMGYIFYIGLIVLIIYLKFILGK"
     gene            20827..21081
                     /locus_tag="U1041_000581"
     CDS             20827..21081
                     /locus_tag="U1041_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767709.1"
                     /translation="MSKKFNKAFYRTWEFYLSLACILQVISAAVNGPFWFIHFLKLGV
                     GLYAGYLAFFKSRSWIKKTWQIYLTISFIVAWTIISFFVL"
     gene            21091..21342
                     /locus_tag="U1041_000582"
     CDS             21091..21342
                     /locus_tag="U1041_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767710.1"
                     /translation="MFKEFNKEYYRSLNFYLMMMLFLGSVGEWLDKGPTLWLGLMLFA
                     FVGTARSAFWSKEWTLKANWQIYLCIAFLLVGAWVEFFV"
     gene            21421..22170
                     /locus_tag="U1041_000583"
     CDS             21421..22170
                     /locus_tag="U1041_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003017755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HEM4767711.1"
                     /translation="MQKIDLLDGERIDQLFSTDVQIIQNREVFSYSIDSVLLSRFPKM
                     PAQKGLIVDLCSGNGAVGLFASTRTKAQIIQVELQERLADMNRRSIALNGLEEQLSVI
                     NDDLANLPQYDLRSKVDLMLCNPPYFKVDEGSNLNESEHYLLARHEIATNLDSICRVA
                     QQVLKSNGRLAMVHRPDRFLDILDTLRTYKLAPKRIQFVYPKASKEANMLLIEAIKDG
                     SVDGLHILPPLVVHEENGDYTPAIREIYYGK"
     gene            22160..22432
                     /locus_tag="U1041_000584"
     CDS             22160..22432
                     /locus_tag="U1041_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEM4767712.1"
                     /translation="MENKAYLYVLECADGSLYTGYTTDVEKRLATHNRGKGAKYTRAR
                     LPVSLLYQEAFASKQEAMSAEALFKKRSRQSKLDYIAEMTKKTRST"
     gene            complement(22447..23058)
                     /locus_tag="U1041_000585"
     CDS             complement(22447..23058)
                     /locus_tag="U1041_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4767713.1"
                     /translation="METVLIVKAHPLDAQKSYALRALEEFQTRYASLHPEDKIEVVDV
                     FEDQIPALDKPLLESMGAVKKGIEISPEQAEQLDRYNVLTQQFLVADKIVVVNPLWNL
                     NVPSQLVSWINTINVAGLTFKYGPEGSIGLVKGKKLLHIQSNGGVYAGQDPAAQYIKS
                     IFEFLGFEDIHQVFIEGQSADPSRAEAIYAEAMTKIDTILETF"
     gene            complement(23191..23598)
                     /locus_tag="U1041_000586"
     CDS             complement(23191..23598)
                     /locus_tag="U1041_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767714.1"
                     /translation="MITYKHNPQLDFQAVLDLYDSVDWTGYTSRPEMLEKALEHSLLV
                     LAAFDGDRLVGLLRAVGDGYSIVFIQDILVLPTYQRQGIGRHLLEQAITHFPDIYQLH
                     LLTDNTEKTRSFYEAIGFTAVDSLDCVAYTYLK"
     gene            complement(23729..25300)
                     /locus_tag="U1041_000587"
     CDS             complement(23729..25300)
                     /locus_tag="U1041_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000673092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4767715.1"
                     /translation="MKFTDLQLSEDILLAVEKAGFETPSPIQEQTIPLALEGKDVIGQ
                     AQTGTGKTAAFGLPTLNKIDIDNQAVQALIIAPTRELAVQSQEELFKFGREKGVKVRS
                     VYGGSSIEKQIKALRSGAHIVVGTPGRLLDLIKRKALKLDGVETLILDEADEMLNMGF
                     LDDIEAIIERVPESRQTLLFSATMPEPIKRIGVKFMKEPEHVKIAAKELTNVNVDQYY
                     IRVKEHEKFDTMTRLMDVDQPELSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQN
                     KRLRVIRDFKNDQIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAG
                     QSGQSITFVSPNEMGYLAIIEDLTKKRMKGLKPATAEEAFEAKKKVALKKIERDFADE
                     TIRGNFDKFKKDAIKLATEFTPEELALYVLSLTVQDPDSLPEVEIAREKPLPFKFAPG
                     QAKGKGGRGGRDRDRGGRRDGDRNRDRGGRRGDRNRRDDKFKRDNRRQDNKKPHQRTS
                     SEKKTGFVIRNKGER"
     gene            25981..27039
                     /locus_tag="U1041_000588"
     CDS             25981..27039
                     /locus_tag="U1041_000588"
                     /inference="COORDINATES: protein motif:HMM:NF012606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylinositol-specific phospholipase C"
                     /protein_id="HEM4767716.1"
                     /translation="MNTKKKISFALTACLGLFLLFPTSTHAHYDRAFWYEEQVTTPHI
                     EQYTDWMSTIPDNRFLGELAIPGTHDSMAHSNHLPFRDIVRTQTMNLQQQLESGIRYL
                     DIRLAYMGDHFALYHGSIALGYQFEEVLTTIQNYLISYPSETILMRIKQEHTHASDPE
                     MFTLFESYYQRYSSLFWNPMTSSNGYNPTLGEIRGQIVLLPDVLSIEHGINYRFVITQ
                     DQYHLNTNWDLYKKWEAIKNHINQANTSSIDFIFMNYLSGSGGSFPYFVASGHVRPAT
                     DASRLSTGLTEPGFRHRYPDFPRTARLGVFATISFEGTNTLVADYLRNNQIRRPGIII
                     SDFPGERLINEVIQCNYR"
     gene            complement(27689..28189)
                     /locus_tag="U1041_000589"
     CDS             complement(27689..28189)
                     /locus_tag="U1041_000589"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEM4767717.1"
                     /translation="MRRYLDVLACFPDTPIVYIDETGIDTYLYRHKARAPRGEKVYDK
                     VSGRRFERISVVAGQTGSKIIAPLLYHGTMTAELFIKWYQEQLLPSLTEPHVIIMDNA
                     AFHPKKQLDELAVAKGHYFLPLPPYSPELNPIERFWAGLKRKVVELLRRFQSVEYCLE
                     CYFKAK"
     gene            complement(28209..28535)
                     /locus_tag="U1041_000590"
     CDS             complement(28209..28535)
                     /locus_tag="U1041_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4767718.1"
                     /translation="MTYGIDFRKRVIAYVQSGHTKKETCDLFGIGTDTLYRWETQLKN
                     EGHLNRKPRSRSPRKLPLDRLEAYVKEHPDAFLKEIAEHFNCSIPSVWAALKKVNITL
                     KKDNNL"
BASE COUNT         8524 a         6227 c         5338 g         8549 t
ORIGIN      
        1 tatgaatggt tgagttcttt cccactccca ttcccctaaa atactagaat gatagctaaa
       61 gaaaacaacc gagaaatctc ggtttttaaa tgtttttagc aacagtcgga accaagctat
      121 ccacttggat acctgcaccc tcgaaaagag ttcgaacttc ttcaacatca acttttccgt
      181 caatctgcac ttcgatgaca acttttccag acttggtagc aagttgcaca gtagatacaa
      241 tattataatc cttatctgcc accaatcgaa taattttttc taactcccct gccttatttt
      301 caacaaggaa ccgaacgcgt actccttctt ctccataacc tgagacatga agaaaagctg
      361 caaaaatatc acgatcagta ataactccat agagttgacc attatccacg actggtaaga
      421 taccgacctt gtttttgtac atgagataga ctgcatcttc tagactggca tagccagaaa
      481 cggtaatgac gttcttaatc atcacatcct tgaccttagt cttattcaaa aggtagttca
      541 tctcgtaaat agataggcta gttgccttcg atggactagc ttctgcgatc gttccctcag
      601 tgaccaaacc aaccaactta tcattttcaa taacaggtag acggtgcaaa tcctgttcac
      661 gcataatatc tgcagcgtgt gcaatggttg tatctggtga aatataaaca actttacggg
      721 tcataaaatc tttaacagac ataggacttc ctcctttggt aaatcatact ttattatacc
      781 acaaatccga aaacgatttc aatatttaat gaaaagaaat gaaaatcaat tcttatccaa
      841 taccttgaaa ggaatgtggg aataatctct gtgcgttttt aaaaattcca aggcttcttt
      901 ttttacctgt acgagattga caccttgggc attggctcca tagacacagc cacaatagca
      961 ctggcgataa atgtcatact cttcacacat ttgaactgaa cgctgatagc ctccattttt
     1021 cttaaagtca ctcggaagat actgggtatc gtataatttc tgcacctcaa tcccaacagc
     1081 attgatggtc tgcgaattct tatgtggact gattgtcaaa gccgaaccaa aatagtcaaa
     1141 accaagctca actgccttct ccgcagtctt atccaaccga taatcatagc aaaccttaca
     1201 ccgatctcct ccctctggct cattggcaag atgctgagtt ttcttgaaaa attcctgagg
     1261 gctatagtca gcttctaggt agcctaccga ctgtccagtt ttctgattaa attctttgac
     1321 aaactgggcc gtcacggctg cccgccgctg gtattccgcc tttggatgaa tattggaatt
     1381 cgtaaaatag atggttacat ctgcatattg agtcaagtac tccaatgtat aggtcgagca
     1441 tggggcacaa cagacatgca tgagaatgtt cggtcgaagc ccagcttcct gccacgtgct
     1501 tgccattttt tgaaacactt tatcatagtt aaccttttga ttcggtgata gagtcgataa
     1561 aatctcttca actttaatca tacaaacctc caaatataca ttcattatac tatatttgaa
     1621 gaccactgca tagatagcaa taacatgaga gaacactccc catttccacc taaaaaggtc
     1681 ccccggacct tgatataaag aaaaacgcct gccggcagtt ctcatttcca acctaaaatg
     1741 aggcgtcagc ctcgagggac aaactagcaa cccaagttgc tagttttcct atctcccgat
     1801 taaaacagcc caatcttgat ataaagagaa acgcccgccg gcgtttctca tctccaactt
     1861 aaaacgtggg gtaacccact tataaagaaa accgcttacc agcggttctc atctccgacc
     1921 taaaaaggtc ccccggacct tgatataaag aaaaacgcct gccggcgttt ctcatctcca
     1981 acttaaaacg tggggtaacc cacgttttaa ccacccagat atgctttttt gacttcttct
     2041 gaggcgagga gttcttttcc tgttcctgag aggacaactt ttcctgtttc tagaacatag
     2101 ccacgatctg cgatagcaag ggctttgttg gcattttgct caatcaagag gacagttgtt
     2161 ccttgttttt gaatatcttg gatgatatca aaaatttctt gaatgaagat tggagccaag
     2221 cccattgacg gctcgtcaag gagcaagagt tttggttgac tcattagggc acgtcccatg
     2281 gccaacatct gttgctcacc acctgaaagg gtagcggcat cttggttctt acgctcctcc
     2341 aaacgtggga agcgcgcaaa gatttttttc aagtttgctt ggttttcttc acgattgttg
     2401 cgaagaaaag cacccatttc caagttttcc ataacggtca agcctgcaaa gacatgtcga
     2461 ccttctggaa cttgtgacaa accgtccgct acgattttac gagcaggaac tttttgaatc
     2521 tcatttccaa ggaaagaaat cgttccagct gatggacgaa caagtcctga aatagtacga
     2581 aggatagagg ttttaccagc accattagcg ccgataaggg ttacaacttc accttcatta
     2641 acctcaaagc taacatcttt aacagcttcg ataacaccgt agttaacgga aagatttttt
     2701 acttctaaca ttgccattaa gcttcacctc caaggtaggc ttcaattaca cgcttgttat
     2761 tacgaatttc ttctggtgta ccatgggcaa tcaaacgacc gtactccaat acgtatatcc
     2821 gctccgtcac ttccataacc aagctcatat cgtgttcgat caagatgata gtaatgccaa
     2881 attcttcttt gattttacgg atgagttggg tcaattctgc cgtttcttgt gggttcatac
     2941 cagccgctgg ctcatccaag aaaagaattt ttggttcggt cgcaagggca cgaacaattt
     3001 ccaaacgacg ttgttgaccg taaggaaggt tcttagccag cgtatccgca tcgccatcca
     3061 aatcgaagat tttcaaaagt tcaatcgctt ttgttttcaa cgcttcttca ttcttataga
     3121 atgctggaag acggaagaaa cttgcaaata cttctgattt accatggttg ccaagaccaa
     3181 tcaaaacatt ttccaaaacg gtcatatttt tgaacaaacg aatattctgg aaagtacgac
     3241 caagaccaag cgaagcaatt tttgatggtg ctttaccgtt caaaatagtc cctgcaagag
     3301 aaattgtccc ctcgctcggc tcataaacac ctgttaagag gttgaaaaga gtcgttttac
     3361 cagcaccatt tggaccgata agaccaacca attccccttc atgaagttcc atggtcacgt
     3421 caccaacggc agtcaggcca ccgaagttct tggttaaatc ttttacttca agtaatgcca
     3481 ttacttaacc tccttcttct tgagtagagc tgctacgctg aattccttcg ttcccaaaag
     3541 acctccagga cggaaaatca tcaagagaat aagagctaat gaatagataa tcattgaaat
     3601 atcagagtaa ctcttgagga atacgttcaa aataccaagt acaatggctg ctacaaaggt
     3661 acctgtgata gagcccaaac cacccaatac gatgataatc aaaacgttaa cggaggtcat
     3721 aaaggcaaag tctttcggaa caattgtccc aacgtatcct gcatggagac cacctgcaat
     3781 ggctgccgtc atagcaccaa atacaaaggc tgaaacttta acaaatgttg gattgacacc
     3841 tacagattct gccgcaattt catcctcacg aacagaaatt gtagcacgtc ccattggact
     3901 acataggaag ttaactgtca ccaaggttgt gatgattaca aaaatataaa ctaaaggcca
     3961 gcttgtaaag agtggaatag acataatacc tgctgcacca ttcgttacac taccaccatt
     4021 gataattaaa atacgaataa tctctgcaac accaagggtc gcaattgcaa ggtagtcacc
     4081 tttcaaacgc aatgttggaa gacctactaa gagggctaca ccaccagcaa ccaacatacc
     4141 gacaagcaag gcaatagcaa aaccaccata agacggcatc attttcccaa gaatacccac
     4201 tgcgtaggca ccaatagcca taaaaccagc atgaccaagt gaaaattgac ctgaaaaacc
     4261 gacaatcaag tttaaaccaa ctgccaagat aatttgaata ccgatttgct gaacaatctg
     4321 gatgtagtaa aaattcagaa tccctgctga tacaagaccc tgaatgattc caaagccagc
     4381 taataagatt gccaaccaaa tcgcattaac ttttaaattt tgcttcatgg ttacaccttc
     4441 tctttcacat ttttaccaag aataccactt ggacgaacaa ggaggatgat gattaataca
     4501 gcataaacaa tcgcatcacg gaaagtatcc aaaccgatta catatgtaaa tgtttcaata
     4561 ataccgataa caaatccacc aagcgcagca cctggaataa taccgatacc gcccaatact
     4621 gccgctacaa aggctttcaa acctggggtc atccccatca aaggctcaat ctggttatag
     4681 tagagaccta ggagaacacc cgcagcaccc gcaagagctg acccaagagc aaaagtaaag
     4741 ctgattgtac ggtttacgtt aatccccatc aactgagctg catcgctatc tacagaaacc
     4801 gcacgcatgg ctttccccat ttttgtacgt ttgacaatta attgaagagc gaccatcaac
     4861 gcaagcgata caccaagaat aatcaactgg atattggtaa cagaaactgg accaaggtta
     4921 aaagtcacag cctcgatggc ttgtggaaag gcttttacgt ctgctgtaaa gaatttaatc
     4981 atagtgtatt ctaagaagaa ggacacaccg atagccgtaa tcaacgctgc tatacgcgtt
     5041 gaattacgca aaggacgata ggctaaaaac tctataacga caccgagaat agctgtcccc
     5101 accatcgcta gaatgagagc aacaaagaaa cgcgttccac catctgcaat aaaagttaaa
     5161 ttgtttaata ggaagtaccc cataaaagca cccatcatat acaaatcacc atgggcgaag
     5221 ttaatgagtt tgataattcc gtacaccatg gtataaccaa gggccaaaag ggcataaaca
     5281 gaaccaagaa tcaaaccatt gacaagttgt tgaagcatag gttcaccaat ctttctaaat
     5341 atttttcgag ctcaatagca ttgttacatt atacaaaatt ttctgaaaat aagcaagtta
     5401 gatagggagt ttaatcatta ccgaaaattt tacccaaatt ttatatccgc atgtctacta
     5461 ttctatacat tctgacaagt gaaaaagagg gaattccctc ttttcatcca ctattagtca
     5521 atagagatag tatctacaga tgattcttct ccgtttgtta aaccaacaac ataaactgat
     5581 ttaacgacat tgtgctcttt gtcaacagac atagtacctg taacaccttc gaaatctttc
     5641 aaagctgcaa gattgtcttt gagtgcttta gaatcagctg caccttctgc tgctttagcc
     5701 gccatgtaaa ctgagtcata tgcaagtgca gagaacattg atggttcttc attgtattct
     5761 ttcttatatg catcatagaa tgcttttgct ttttcgcttg ctgatgttac aaatccagaa
     5821 aggtagtaaa catttgatgc tgctgatgca gttgccaatt cagtaaattg tggtgagtca
     5881 aaaccatctg aaccaagaat tggcttgtca atacccaaac cgcgtgcttg cttcacaatt
     5941 gtacctgttt cattgtagta accaggcatg ataatcgcat caaattcctt atctttcaat
     6001 tttgtcaaag cagcttggaa atctttatca ccagaagcaa atgtgatttc tgaaacgatt
     6061 tctcctgtgt atgctttctt gaacgcctct gctacaccct taccataatc agaagagttg
     6121 tcaaagtaaa gaacaacttt cttagctgat aagttctcag tagcgtattt agccataatt
     6181 tgaccttgat acccatctgt aaaggttgta cggaagaagt attcttggac ctcaccttta
     6241 tcgttcacaa ccaagtttgt ttgggttcct gaaggagtaa tcataggaac accagcagat
     6301 gtcaatgctg gaatagaggc tgctgaagct cctgatgtag ctggcccaat cacaacgttt
     6361 gccccttcac ttgccaagct tgttgcaaca gtagctgcct ctgctgtttc agacttgttg
     6421 tcttttgtaa tcacttcgat ttttttgccg tcaataccac ccgcagcatt gatttctttc
     6481 acggcaaggt tggcaccttt ttcctctgtt tgaccataag atgaaacagc acctgacaac
     6541 tccaagttgt agccaatttt aaacgtatca cctacagaag aacctgcggc tgaagtattg
     6601 gttgtcgaaa cattaccaca tgcagcgagt agagctgcag aggcaaatgt agcaagcgct
     6661 actgcaaatt ttcttgtttt catgaaaact ccttaaatct ttcttaaatt ttacgatgta
     6721 tctaatatac tgaattatct gaaaattgtc aacaaaaaag aaaaaaattt taaaataaaa
     6781 aattagcagg agatacatac ctgctaattc cgactatcct acaactgatt gttcttcatc
     6841 tctccataga ttacctacaa agttttggtc taattcctta atgtatgaag gaaccacttt
     6901 ttttacaaaa cgttcctttt tcaattttaa tatggtagct tctactagtt cttgatccat
     6961 atacaccaaa acatatcgca agcgtttgga atggtaaaca atatctccat attgactgag
     7021 tttccgtgca tcacgattgt agtgtaaata gacagttaag caagtacgat ttttcttctc
     7081 aaacatgtct tctcctctaa aaattctctt tctatattat accgttttca atgataaatg
     7141 aaaagctcca actacctgta aaagagttgg agctagtagg aatagtcagt gttattacat
     7201 atttgtcact gcttatttga cttttgtatt atccataatc tggtcaataa atccgtaagc
     7261 caaggtttct tcagctgaca tccagtaatc gcgttcggca tccttgtgga tttgtttcac
     7321 tgtcttacct gagttgtctg ccaagatttt ttctagctta ttacgtgttt ttaataggtg
     7381 ttctgcagca atggccatat ccgtttgctg agtaccgcca ccagttccac ccattggctg
     7441 gtgaatcatg tattccgcat ttggcaacat gaaacgtttg cccttggcac cgcttgaagc
     7501 gatgatggtt cccatgctgg cagctgttcc cataacgatg gtttgaacat cagctttaat
     7561 aaagttcatg gtatcgacaa tagctagacc agctgacaca gatccaccag gtgtatttac
     7621 ataaaggtaa atatctttgg ttgggtcttg ggcatcaagg aaaagcaact gggcaatgat
     7681 agagtttgcc atgttgtcct caactggtcc tgtcaacatg ataatgcggt ctttcaaaag
     7741 gcgtgagtaa atatcataag aacgctcacc acggctagtt tgttcaataa ctactggaat
     7801 cataaaatta ctccttttcg agattttctg tacccattat atatgaatag tcaaaattgg
     7861 tcaaataaaa aacacgattt caggaaatga aaaagaaacc agcagagctg atttcttaat
     7921 tattttgtac cgaacaagcg gtcacctgca tctcccaaac ctggtacgat gtagcctttt
     7981 tcattgagtt tttcatccaa ggctgccgtg tagatatcaa tatctggatg tgcttcttga
     8041 agagctttta caccttctgg agctgaaaca agagcaacaa atttgatatt tgaagcacca
     8101 cgttttttca atgaatccac tgcaaggatg gctgaaccac ctgtagcaag cattgggtca
     8161 actacaaaaa tatgacgttg atcaatgtct tctggtaatt tcacaagata ctcaacgggt
     8221 tgaagggttt cttcatcgcg gtacataccg atgtgaccaa ctttagctgc tggtaccaag
     8281 cttagcaaac catcaaccat accaacacct gcacgaagaa ttggtacgat agctaatttt
     8341 ttacctgcaa tttgtttctg aactgtttta gtgattggcg tttcaatctc cacatcttca
     8401 agtggcaagt cacgcaaaac ttcgtaaccc atcagcatcg cgatttcatt aaccaactca
     8461 cgaaaatcct ttgttgaagt agatgtacga cgaaggatag acaacttatg ctgaatgagt
     8521 gggtgtgaaa tgacttggaa tttacccatg atgataaaac ctctcttttt tgttttttct
     8581 attttaccaa aaattcatga aaaaagcatg ggaaaagaaa aactgagtaa cttatttttt
     8641 aaaaactatc gcctcgaaag gtctcagaac attctcatct aaattgacac cattttcgta
     8701 attatgcata aataaggaat agtccttaag tgataactcg tacgcttgct cttcacttgt
     8761 gaaattgact aaaataatga aatcatcctg ttcatcatat ttacggtagg ccattaccga
     8821 actatttcta gtctccatca cttcatattt tccttcagac atacaaggat actctttccg
     8881 aagagcaatt aatttttgat aggtatagaa aagcgattgt ttgtctgcaa gtgctttttc
     8941 aacgttgatg tctttgacag tatctcccaa agccagccag gcttgacctg tactgaagcc
     9001 cgctccttct gctcctgtcc attgcattgg acggcgagca ttatcacgac ctttggcatt
     9061 tatagaagta atcaattcct ccttggtgaa gccattttca atccgttccg catacatgcg
     9121 acgtgtttca atatcgtccg cttggctaat atcagtaatt ggtgtgttaa tcataccaat
     9181 ttcctcacct tggtagatat aaggtgtccc tgacataaaa tgaagataaa tagctaacat
     9241 tttaccactt agttcacgaa atgcaggtcg atcatcaccg aagcgagaaa tggcacgagg
     9301 taaatcgtgg ttattccaga aaagcgagtt ccagccttta ccaaccagtt cagtctgcca
     9361 tttggataga acattatgca aacgagctgg atcaagcggt gccaaatccc acttttcttt
     9421 cccttcctgc tgatcaagtc cgacatgttc aaattggaaa atcatcgaaa attcttttcg
     9481 atcaggatgc gaatataact gagcattttc tggattggca ctccatgtct ccccaacagt
     9541 cactaagtca taagcaccaa aggttttctc atttaattcc tgaataagag gatggagagt
     9601 cggtccatcg gctgtaatta atttttccgg ttcttttcca atcaaatcaa tcacatctag
     9661 cctgaaaccg ccaacacctt tttcaatcca aaaattgatc atatcccaga tttcttgttt
     9721 cagagcagga tttttccagt tcaaatccgg ttgcttaaca gagaattggt ggagatagta
     9781 tttattcaga tgtggaacgt attcccaagc agaacctgag aaggtcgagc gtaattcatt
     9841 cggctcatca gcccaaacat aataatcata atagggatta tctggtcctt tgagggcttc
     9901 ttgaaaccag aaatgttcat ccgaggtatg attgagcacc aaatccatga ttattttgat
     9961 attgcgttta tggccttctg caatcagctc ttccatatct tccatggtcc caaattctgg
    10021 agcaattcct tggtagtcac tgatatcgta accattatca tccatggggg actgataaac
    10081 aggactgagc caaatagcat caattccaag ctcatggaga taatctaatc ggctgataat
    10141 ccctcgaata tcccctactc catctccatt tgaatcttga aaactacgag ggtaaatttg
    10201 gtaaatgacg gacttcttcc accaatctgt tttttgtatt tctggcattt gattgatcct
    10261 ttctgtacaa tcttatttac gcaagaaaaa gaggtgtccc cctttttcta tataatcata
    10321 ttataactca attgtggtaa tttttccctc ttctatttca acaatttcaa aggatttttc
    10381 ttttagattt gctgttagac gggcagacac ccctgcatct tgattattcc agaaaatttc
    10441 catacttgtt tcatccagca tcttaacgga gaactctccg tcgaaagctg gacttgtatt
    10501 gcggaattta aggagtttga acaaggattg taccacagga cgttgtactt cctgctcaat
    10561 ttcttccaaa tcatagtaat ggcgattgat attgcggcct tccttgcttg attccaaaag
    10621 ctcaatatca ttttcgcctg ctagcaaacc aacatagtaa atctgtggaa tacctggtgc
    10681 aaaacattga agaacacgcg ctaataggta agcttgatcg ttattgccaa gggcagaata
    10741 ataagtacag ttaatctgat aaatatccaa attattgtag gcttctgtac tataaatttt
    10801 cttcacattg gcaccttgtg catacaaggc ttcacgggtc tcctctgtct cctcatccgt
    10861 cagcaaatcc ttaacatcca caacaccgat tccatcatgt gtatcaagag ttgtaaattg
    10921 cttgcgaggg caaatctcca tccagtgcac caggcgattg acatgaccag aatacaaagc
    10981 gtggagaacc agcattggca aggcaaaatc ataaacataa taatcttgct cggcaatttt
    11041 ctgctgaatg gtatagtgtt catgaatttc tggtaagatt tctacatctt ttggcgccaa
    11101 taactgacgt ggaaaatgta gcatttccca gatatcaggc tccacaaaga aacagttggt
    11161 tccaattttt ttattggcat aagcaaaggc gtccaaacga atgatcgaag caccatgttc
    11221 tgctaattgt tccagatttt cttggatgaa acggcgtgtt gtctctgtag tcacatccaa
    11281 gtcaatctgt tgctcatcaa aggtacacca taccttctcc tcgctaccat cagcaaatgt
    11341 tgcaattcga tatggagcac gaggtttacg cttataaatc aaatcaacat cttcttgcgt
    11401 tggctcacca tttggccaaa agtttttata gcgaataaac aaatccgcat aagctgattc
    11461 atctttcttt tcaagaaaat caaggaaata aggagatttt gcagaaatat gattgatcat
    11521 aaaatcgaac atcagataat agtccttgct caatacttca atatctgacc aatctccaaa
    11581 tgcagggtcc acctttgtat aatccattgg cgcaaaccca cggtcacctg atgatgggaa
    11641 aaacggcaga atatggacac ctcccacaac atcctttaat ggtccctcaa gaactttttt
    11701 caaatcctta agattcttgc ctaaactatc cgaataagta atcaacatag cttggttttt
    11761 aattttcatc gacattctcc tttgtaagcc ttttcttttt tattttttag aaaaggttga
    11821 acaagtcaac ctttgtaatt atttgacaga accacttgtc atacctgaaa taatatgttt
    11881 ttggaagatg aggtaaacaa gtaagattgg gataattcct acaacatagg atgcaaatga
    11941 tgggccatag tcactaaaat acataccttg gtaattgtat tggaaaagtg gcaaggtcca
    12001 catgctttga tcacgattca aaaccaagag cggtaagaga aaatcgttcc agacccagag
    12061 ggcattgata atcaaaaccg tagcatgcat gggtttcatg agtgggaaaa tgattttcca
    12121 gtacatagta aatttatcac agccatcaat agctgccgcc tcatccattt cttcaggaac
    12181 aatggtctta atatagccga catagaggaa gagggcctga ggaacggcat aagttaagta
    12241 caagataatc agaccgacaa tgttgttcaa accaaggctt gacattaatt tagtcattgg
    12301 gagcataatc acttggaaag gtacaaaaat cccaataatc aagaaaaagt agataaagtt
    12361 aaacactgtc tggcgtttca tttgacgggc tacggcgaaa gctgccattg gaattacaag
    12421 tagaatcaag ccaactgcta caatcgtaat caaggctgaa ttgccaaaat attgtacaat
    12481 cccatcatta aacaagcgtt cgtagttatt taaggtgaaa ttttcaggaa gaccaaagaa
    12541 attgctcgtg atttccttag ttggtttgaa cgaacttatt atcgtcacaa gtagcggaat
    12601 aaacatgaag agaataccgc tgaagagcac gagatagacc caccaatttt tctgtttttg
    12661 agtattcatg tttatcctcc tagatttcaa atttcttcga aattctcatc tgaatcaatg
    12721 agatgacaat aatgaagatg aagagtacta cagccaaagc attagcataa gagaatttat
    12781 tatctacaaa agcatagttg taaacgagta aacccaagga ttctgttttg ccgtctgggc
    12841 caccacttgt caatgcgaag ataaggtcaa atgctgtcaa acctgatttc attgccaaga
    12901 tgaacaccat actgatggat ggtaataaga atggaagttc aatattgaag aattgttgag
    12961 aacgagtcgc accatcaata gctgctgcct ctttcacatc ttctggaata ctttgtaaac
    13021 ctgacaggaa aatgataact ggcatagcca acccttgcca tagtgccaca aaaatcactg
    13081 ctggaataac agtattttct tgtaccaata agttttccat caaccaatcg atatgaagga
    13141 tttctccaat ctgtgtaaaa ccatagttga acaattgaac aaaaatcaag cctaaagtaa
    13201 cggttgaaag aactgcaggg aagaaatacc aggttctaaa gaaaccaaca gctttaatct
    13261 tacgattaag gagactagcc aaccaaatcc ctataacaat ttctccgatg accaaaccaa
    13321 tggtgaagat aatggtaaaa gtcatagatg tataaaaatc aggattcttc aagatatcta
    13381 gatagttttg aacgccaatc aagttgaaat cagatgtcaa tccattccaa tccgtcaagc
    13441 tataatagat acccgtaaat aagggataga agaaaaagat taactgtaga ccaattggta
    13501 tggcaacaaa tagatagggc caatatttgg caataaaacc tttttgattc atcatggtac
    13561 tccttttttc taaaatgtat agttacttag ggtcagtttg aatggagtgg ttaggaggga
    13621 ttcaaactga ccctaagcaa ctataaagaa gagctaggct gttctagccc tccttatagt
    13681 tttcttgaat tattttttca ttgggtcaaa gaatgcgttc agttttttca ctaattctgc
    13741 tgagtttgga tttttaacca tttcaacagt aatgttccag aactcatctt ctgattccca
    13801 ttcagattgc aaccaaacta catgtttgtc agtgaaggca tattgtgtca ctccagcagt
    13861 ttcttcaaac ttaccttctg tatctacacc ttcaactgaa gttggtgagc catctacatc
    13921 atagtatttc tggataactt ctggacgaga aaggtattct aggaattttt tagactcttc
    13981 tgggtgctct gtatctgctg aaatagatag agcaaggtca gctgcaccga tggtatagtc
    14041 gccaccttct ttatcgccag ggaatgtaaa cataccatat tcaaattctg gttcttgttg
    14101 gtttacagct gtagctgccc atgtaccttg tggaagcatg agagcatcac ctgctgcaaa
    14161 ggctgccacc gcatctgcat aaagcgcacc agttgcccct ttttgtccat tatctgtcaa
    14221 cagttgtaag cgttctaaaa ctgcttttgt agttgcatca tcttgaattg cgcctttggc
    14281 actacggatt agaatatctt ctgcaccatc aaatccacct gcaacagtta cccaagctaa
    14341 ctgatggtag ccgttcaatg accaagcatc gttcaatgaa agagcaaacg gtgctgcact
    14401 gccatcagcc ttgattttgt ctaccaaagc cacaaattct gcataggtag ttggaacttc
    14461 gagccccaat tctttgaact tatccttatt atagtaaata ccataggcat ttgctgtcaa
    14521 aggaagggtg taattttttt cattaacaag atatggcgtt acagcaccat cttttagatg
    14581 actgagacct gcatcatcac caatttctag gaaacgacca tccgctgcgt atgctttgaa
    14641 gtccgcattt tgtggataaa tattgatgac atctggcgct tcattgttgg ccatacgagt
    14701 tttcagaaca gttcctgcat ctggtacatt tgaaaattta acatcaatcg taggattttc
    14761 tttttcaaat tcatcaataa tttcctgaag ggtagcctgc atttctggtt tttgtgagaa
    14821 atattcaatt tctaccttat cgctactact tgcattccca caagcaacca agaagctggc
    14881 aaaggcacaa actgacgcac attttaaaaa tgttttcatt ttcatatata aaatcctcct
    14941 agattttgtt aaaaatatat tgtacactaa aataatcatt ttgaacatgg ggcatggtga
    15001 gtccaatgtt catcagttca tccccgtaga atgtctctcc taattgtggg cattcgtaaa
    15061 gggcatctgg gtctagcccc ttcaaccgaa catgaagcaa aggcgcttct ggcttagcaa
    15121 gaatttttac aaatgtaaag accgcttgat tcttatcttg actaacataa ttggcagccc
    15181 aggtattggg cgtctttttc agacggtaga gctgaccgaa ttggatagtt tcacgaatgg
    15241 agtgataggt ttcgatctgc tgactgattt catccaattc cttttccgaa agtttcgtta
    15301 aatccagctc gtaaccaaat gctcctccca tcatagccac attgcctcgt gtagcaagag
    15361 gtgtgttccg accaacctga tggtttggaa ctgcagaaac gtgtgcacca attgaggaag
    15421 agggataaat caaactagta ccttcttgaa tagataagcg ctcaatcgca tctgtatcat
    15481 cacttgccca agcttgtggc atgtaataca tgattcctaa atcattacga cctccaccgc
    15541 ctgcacagga ttcgaaaaga atatccggga accgcttggt aaggtggtct aatacacggt
    15601 agagacctag catgtaacga tgatggaact caaagcgctg gtcatttgct aaaccttcag
    15661 ggatattggt gatattacgg ttcatatccc attttacata agaaatattg gctgattcta
    15721 atatggaaga gacgctatca atgatgtagt cacagacttc ctgcttagtc aaatccaaaa
    15781 ctaattgttc tcggctgtag attggtaagc gtccttctgt gcgaattgcc caatcaggat
    15841 gctcacgata aagatcgcta tcaatagaaa tcatctctgg ttcaaaccac aatccgaatt
    15901 tcatgccaag ctcatttatt cgctctgcta aaccattcaa accatttggc aacttatcca
    15961 aattgacttt ccaatcgccc aatgaacttt catcattgtt tcgtttacca aaccaaccat
    16021 catccagaac aaacaattca ataccagctc gacttgcaac ctgagctaac tgtaaaatct
    16081 tttcttctgt aaattcaaaa taggtcgctt cccagttgtt gattaaaatg ggtcttggtt
    16141 tgtttacaaa cgatgatcga atgaggtgtt ttgtgataaa gtgatggcta ttttgtgtca
    16201 tgccagtaaa tcctttatca gtgtatgata agagaacttc tggagtttga aaccggtcat
    16261 ccttatccaa ttgccatgag aaatagtgac tttccaatcc tagtcccaat cgactggttt
    16321 ccatggctgt cgtttcgaca aatgctgtaa agttgccact atagacaagg tgggccgcat
    16381 aaacatcgcc cttgtcctca cttgcatcgg gtgaagctag tgctaagaag ggtgttcttg
    16441 agtgacttga agcacctcga atgctaccaa tcgaatactg accttttgtc aatggggtct
    16501 gtgtccactc tttttcatag gcataacgtc ctgccaagct gtgaacaatg aaatcttgat
    16561 gtggaaaatc aagcgttgca gacaagacct tctctagttt gcatggatat ttgccagttt
    16621 gaattgtagc tgaccttgca agataagaag cttcttcaaa aacagaatac tgaagtgtta
    16681 cggtaatatc tgtcaactga tcgtaaagat caatttcaag actctctacc tcttcttgat
    16741 ttccaaaact tgctggtaat cccctcagtt cttttttccc cttgtataat cgatactctt
    16801 tgtattttag gtcaagagtg actccaaatt cgttccgaac atctaatgct gaggttctaa
    16861 aatctcccag accattgctg gaatattcga gtgggaggac atccaatgag tatgtcctat
    16921 ccccagtaat tggactcgga gaaaacgatc gatctaaata tgttattttg tttccatcgc
    16981 taaatttttc gatttttttc ccaaaataac gatgaaccag atcgcctgtt tccaacactt
    17041 ggatgatata agagaattct cttgttttca ggtgaaaaat ctgtttttca ttataaatct
    17101 caatcacatt catctctccc atctcttctt tatgctatta ttttacaaaa tgaaaacgct
    17161 ttatttaatg gtcttttgta tttaaaacat gttataatgt ttcctaggag gattgaaatg
    17221 aatattctaa atatctataa tgaattggat agtcataatt ttgacctaaa tgtagaccat
    17281 tacggtgccg aacaatgtga caagggctat tccttcggtc ctactatccg tgataatttt
    17341 gtcctgcatt ttattacaaa tggaaaaggg aagattcttg ttgacggaaa aacaagctac
    17401 cttgctgcag gcgatttgtt tattcttcca aaggatgttt ccatttttta ccaagctgat
    17461 aaaaatgaac cttggactta tatttgggtt ggttttagtg gttcacgagc aaaagaccta
    17521 cttaatcaaa gtcaactgct agaaaactac tacctccact ccaatctaga gtcaccaatt
    17581 ctaggctaca tgcatcagat taaccatgtt cagatgcatc ccatcccctc tatcacagaa
    17641 ttggtcttaa ttggctacct caaccaactc ttagcagcac tcattgagga atttcccagt
    17701 gaaacattaa ttaagcctga aacacaaacc aagcactatg ttcagcaagc catcaagatg
    17761 attcataacc actatgccca tccaattaaa gtttctgaaa tagcagattt tctagcttta
    17821 agccgaagct atctctataa aatttttaag caggaaactg gctattctat caaagattat
    17881 attttacaag taaaaatgaa tcgttcttgt caactattag aagatgcttc tcggagtatc
    17941 actgaaatcg cctattctgt cggataccaa gaccctctca ccttcagtgc ggccttcaaa
    18001 aattatttcc atatgagccc gacaaaattt agaaaaatac aaaaaaataa ggattaggtg
    18061 attttagtca cacctagtcc ttatttcttt atccaaaaac cttaccaagt cgctgacagg
    18121 cttcttcaat gacatcaaat ggagctgcta cattcagacg cgcatgatgc ttaccttcct
    18181 taccaaaggt caaaccatca ttcaaaatca acttcgcttt acaatgaaga atatcaaaga
    18241 gctccgcatg ctctaactca taagcagaaa aatcaagcca gatgaggtag gttccctggg
    18301 gcttcatgac cttgatcctt gtatgggttg ccaaatactc ctcaacaaag tctatatttc
    18361 tctccaaaat aaccttcaac tccttcaacc actcatctcc ataagtgaaa gcagcttctg
    18421 tggttaacaa gccaatcgtt ggaatctcgt gctgattatt tatcaattga cgcttagcga
    18481 atgtcttgcg aatgcttgga ttttcaatga ttgcaaagct attttttgta ccagcaatgt
    18541 taaatgtttt agttgcagat gataagacaa ttgaaaaatc tttgaaattt tcatccaccg
    18601 tattaaaggt atcatgtttg tgaccatata aagccaaatc ttgatgaatt tcatctgaga
    18661 caaggataac accatgtttc tgacagagac gaccaatagc taagagttct tccttgctcc
    18721 aaaccctacc acctggattg tgtggattac agaaaatata gagtttcact tgattctcta
    18781 caatgtcctt ttcaagctgg tcaaaatcaa tcctaaaaac accatccact tcaacaagtg
    18841 aattggtaac aagctggcga ttgtttaatt ttacagtccg cgcaaagggt ggatagactg
    18901 gcgtgttaat taggactgca tccccttctt ctgtcaaagc ttgaatagcc acagataagg
    18961 ctggaacaac tccctcgatg agtaggatag actctctatt aatcttgtag ccatgctgtc
    19021 tatcttccca gtcaataata gactgataga ggctgtcact agcataagga taaccaaaaa
    19081 catgatgatc tgcgtagtca cggataactt ggcgaatttc tggtagaggc tcaaagtcca
    19141 tatctgcaat ccataaaggt aagagttcag gatcagcctc cacttttttc catttttccg
    19201 catgctggga tagacgattc ggactatcta taaaattata ctgtgtcata tcttatccct
    19261 ccaaggctgt ttttaaatct acaatcaagt cttccgcatc ctctatacca atagacagac
    19321 gaagcaaatc atctgtcaaa ccgtaagaat gacgggtttc agctggaata tctgcgtggg
    19381 tctgagtggc tggataggta atcagactct ctactccacc cagactttca gcaaaggtaa
    19441 agactttcag ggtgttgaga atatggggaa tccgactttc atctaccacc ttaaccgaaa
    19501 tcatcccacc ttttcctgtg tagtaaactt gcttgactgc tggactcttc tccaaatagg
    19561 caacaatttt ctgagcattt tgtgtcgccc gctccattcg aagcgagagg gttttgagtc
    19621 cacgcatgag taagtaagaa tccagtggag atagagttgg acccgatgta ttttggtcat
    19681 aaaagagctt atcatatagg tcttgatcat tggtcatcaa agcgccagct agtacatcat
    19741 tatgcccaga taggtacttg gttgctgaat gtaggacaac gtccgctcct agaacaagtg
    19801 gattttgata aatagggctg taaaaagtgt tatcgacaat caccttagca cctttggcat
    19861 gggcgatagc cgaaacctta gcgatgtcaa actccaccat gagtgggtta gtcggtgtct
    19921 ccagataaac atagtctgtc tcttcggtga tggctgctat cagctcctcc tcggtgtttg
    19981 cataggtaaa ttgaaatcta ccgatactct cttgctcatt gaaccaacgg aaggaaccac
    20041 cgtacaaatc acgcgccgct accacttgac tccctacagg aaaaccatta aaaagtaaga
    20101 ccagagcagc cattcccgag ctcgttgcta aggcatagtc ggccttttca atagctgcca
    20161 aagtcgtctc tagactggca cgtgtcggat tttttgttct cgtgtagtca taacctgtcg
    20221 attgaccaaa ctcagggtgt tgataggtcg tcgaaaggtg gataggggaa atcaaggcac
    20281 ctgttctctc atcgctattg atgcccgtat gcgctaaaat cgtatcaatc ttataatctg
    20341 tcataacatc tactccaatc taacttacaa tatagtctag catgaaatag gagatttggt
    20401 gtgaaaaacc tcaaaaaata cttatagaaa aatagcaagc tttgctatag tttttcttta
    20461 taacaataac catactggat ttaccgataa atacttttaa atctatacat tatttgatat
    20521 aataaaagaa agagaggtga gtgaatatga aattccagtt taacaagcat ttctatcgtt
    20581 atagcgcctt ctattctcta gttttttggt cttgtttttt tctttcagac attttgctag
    20641 actcttccca aacgcctgca tggtatagcc tattagcctg tctgattatt ttaatccatg
    20701 ccattcgaac ctttttcttc aaggaagaaa aggaactcgc tcgcatgggc tacatcttct
    20761 atatcggatt gatcgtgttg attatctatc tgaaatttat tttgggtaaa tagaaaggag
    20821 cttactatgt ctaaaaaatt caataaggca ttctatcgga cctgggaatt ttacttgtct
    20881 cttgcctgta tcctacaagt gatttctgct gctgtaaatg gaccgttttg gtttatccat
    20941 tttctcaagc ttggagtcgg actttatgct ggttatctag ctttctttaa gtcacgtagc
    21001 tggattaaaa aaacatggca aatttatcta acgattagtt ttattgtcgc ttggacaatc
    21061 atttccttct ttgtactgtg aggattttat atgtttaaag aatttaataa agaatattat
    21121 cggagtttga atttttattt gatgatgatg ttgtttctgg ggagtgtagg cgaatggttg
    21181 gacaaaggac ctaccctctg gcttgggctc atgctttttg ctttcgtcgg tactgcccgt
    21241 agtgcctttt ggtctaaaga atggacctta aaagcaaatt ggcaaatcta tctctgcatc
    21301 gctttcttgc ttgttggggc ttgggtagaa ttttttgttt aaggattgag ggcgaagtat
    21361 tcgctctctt ttcattcaaa ataaacagtg attttcattc aaagatggta taataaacct
    21421 atgcaaaaaa ttgatttact agacggtgag cgaattgacc agctcttctc aactgatgtt
    21481 cagattattc aaaatcggga ggtttttagc tactcgattg acagtgtcct gctctcgcgt
    21541 tttccaaaaa tgcctgctca gaaggggctg attgttgacc tttgtagtgg aaatggggca
    21601 gtgggtctct tcgcctccac acgcaccaag gcccagatta ttcaggttga attacaggaa
    21661 cgcttggcgg atatgaatcg ccgctccatt gccctcaacg gtctggagga acagctttcg
    21721 gtcatcaatg acgacttggc taatctgcca cagtatgatt tgcgctccaa ggttgatttg
    21781 atgctctgca atcctcccta cttcaaggtg gacgagggtt caaacctcaa tgaaagcgag
    21841 cattatcttc tggccagaca cgaaatcgcg accaatctag acagcatttg tcgggtggcc
    21901 caacaggtgc tcaagtccaa tggtcgcttg gccatggtcc acagacccga ccgattttta
    21961 gatattttgg acacgctgag aacctacaaa ctagctccca aacgcatcca gtttgtctat
    22021 cccaaggcca gcaaggaggc caatatgttg ctgattgagg ctatcaagga cggctcggta
    22081 gatgggctgc acatcctgcc acctctggtt gtccatgaag aaaacggcga ctatactccg
    22141 gctattcgtg agatttatta tggaaaataa ggcctacttg tatgtcttgg aatgtgccga
    22201 cgggagtcta tatactggtt atacgactga tgtggagaag cggcttgcta cccataatcg
    22261 tgggaaaggg gccaagtaca cccgcgcacg cttacctgtc agcttgctct atcaagaagc
    22321 ctttgctagt aagcaggaag ccatgtctgc cgaggctttg tttaagaaac gcagtcggca
    22381 gagtaaatta gattatattg cagaaatgac aaaaaaaact cgctccacat agggcgaggt
    22441 tttgacttaa aatgtctcca aaatcgtatc aatcttggtc attgcctcag catagatagc
    22501 ttcagcccgg cttggatcgg ccgattgtcc ttcgataaag acctgatgga tgtcttcaaa
    22561 gcccagaaac tcaaagatag acttgatgta ttgggctgca ggatcttgac ctgcataaac
    22621 gccaccattg gactggatgt gcaacaattt tttgcccttg accagaccga tagagccctc
    22681 aggtccatac ttgaatgtca gtcctgcaac gttaatggta ttaatccatg acactaattg
    22741 acttggcaca ttgaggttcc aaagaggatt gacgacgaca atcttatctg ctaccagaaa
    22801 ttgctgggtc aagacattat agcggtccaa ctgctccgct tgttcaggac tgatttctat
    22861 acctttttta accgctccca tagattctaa caaaggctta tccaaagctg gaatctggtc
    22921 ttcaaagaca tccactactt ctatcttatc ctctgggtgc aaactggcgt aacgagtttg
    22981 aaactcttcc aaggcccgca aggcgtagga cttttgtgcg tcgagggggt gagcctttac
    23041 aattaataca gtttccattg gttctctcct ttatcatccg ttattactaa ttattgataa
    23101 atacattcta ctctttttga tttgaaattc aaatcagttg ctcgaagcaa aaggctggtc
    23161 tcccagcctc tgctttttta gattgtttta ttattttaaa taggtgtaag cgacacagtc
    23221 caggctatca acggctgtaa agccaattgc ctcatagaaa gaccgtgttt tctcagtatt
    23281 gtccgtcaag agatgaagct gatagatatc tggaaagtgt gtaatggctt gctccaaaag
    23341 atgacgccca atcccttgtc gctgataggt tggtaggacc aagatgtcct gaataaaaac
    23401 gattgaatag ccgtcaccaa ctgctcgcaa gagacccact agacggtcac cgtcaaaggc
    23461 agcaagaacg agcagactat gttccaaggc cttctctagc atttctggac ggctagtata
    23521 tcctgtccag tccacagaat catagaggtc aaggacagct tgaaaatcaa gttgaggatt
    23581 atgtttgtaa gtaatcatgt ctttctcctt tgtattgttt tttagaatac aaaggcttta
    23641 tccattgtca aaatgcccat ggtcttacct cctgttttgc tacttctagt ataacaaaaa
    23701 ctgctccaat tatgaagcag ttttaagctt atctctcccc tttattgcgg ataacaaagc
    23761 ctgttttctt ttcgcttgag gtgcgttggt gtggtttttt gttatcctga cggcggttgt
    23821 cacgtttgaa cttgtcatca cgacgattgc ggtcaccacg gcgtcctcca cggtctcggt
    23881 tgcggtcacc atcacgacga ccaccacgat cacggtcgcg accaccacgg ccacccttgc
    23941 ccttggcttg accaggtgca aacttgaatg gcagtggttt ttcacgtgcg atttccactt
    24001 ctggcaaact atctggatcc tgtacggtca gactaagtac gtagagagca agctcttcag
    24061 gcgtaaattc agtcgccagc ttgattgcat ctttcttaaa cttatcaaag tttccacgaa
    24121 tggtctcgtc tgcgaagtca cgctcaatct ttttcagagc aacttttttc ttagcctcaa
    24181 aagcctcttc agcagttgcc ggcttgagtc ccttcatacg cttcttagtc aaatcttcga
    24241 taatggccaa gtagcccatc tcatttggag acacaaaggt gatcgactga cctgattgac
    24301 ccgcacgacc ggtacgaccg atacggtgaa catagctttc tggatcctgt ggaatatcgt
    24361 agttatagac atgtgtcaca cctgagatat ccaaaccacg cgccgctacg tccgtcgcaa
    24421 caaggacatc aatctggtca tttttaaaat cacggatgac acggaggcgc ttgttctggt
    24481 ccaaatctcc gtggatacct tctgcacgga aaccacgcag tttcaaacca cgagtcaatt
    24541 catcaacacg gcgcttagta cgaccgaaga cgatagacaa ttctggctgg tcaacgtcca
    24601 taaggcgtgt catggtgtcg aatttctcat gttctttgac acggatatag tattggtcca
    24661 cgttgacgtt ggttaattcc ttagccgcaa tcttaacgtg ctcaggctct ttcatgaact
    24721 tgacaccaat acgcttgatt ggctctggca tggttgcaga aaacagaaga gtttgacggc
    24781 tttctggcac acgttcgatg atggcttcaa tatcgtccaa gaagcccatg ttgagcattt
    24841 catctgcctc atcaagaata agggtttcaa cgccgtcaag cttgagggct tttctcttaa
    24901 tcaagtccaa gagacgacct ggtgtaccaa caacaatgtg ggcacccgaa cgaagggctt
    24961 tgatttgttt ttcaatgcta gaaccaccgt aaacagagcg gactttcaca cccttttcac
    25021 gaccaaattt gaagagttct tcctgactct gcaccgccaa ctcacgcgtt ggggcaataa
    25081 tcaaggcttg aacagcttga ttgtcgatgt caatcttgtt gagagttggc agaccgaaag
    25141 ctgcggtttt ccctgtccct gtctgtgcct gaccaatcac atcttttcct tccagagcaa
    25201 gcggaatggt ctgctcctgg attggtgacg gcgtttcaaa accggccttc tcaacagcaa
    25261 gcaaaatgtc ttcggacaac tgtaaatctg taaatttcaa ttatgatacc aagtgcgtta
    25321 agaaaacaag gtgaaaatag gagactgacg cagtgtgggt acacactagg aagtctatct
    25381 ttttcacgaa gtttttagca cgggttcgaa tactcttccc gaaccagttt cctaacgcat
    25441 ttcctttctt ttacaaggca gtgcgaagct accttatcta actttttttg taacaattat
    25501 ttccactggc agcgaactaa ccagtatcag acttgtaact taactagtat aacacattct
    25561 aagcataaag gttggctttt gccttgaaaa taaaaataat acgttttcaa aaaaaactta
    25621 aaaatatttg aaggtgagaa agtgagaaat taagactatt tgaatcatag tttgaacaac
    25681 caatgcggta ttgtattcag acatataaat aataaaggta aaggtaactc aaaacaatag
    25741 ctttcgtaaa caaatgctat ctttctcaag actagtgact atcctcttcg cttttatttt
    25801 taccctatga tataattaag gtgatgactt ctcacagcta atcgctggtg tcccaatatc
    25861 aaaaaaccac gatggaaact aacaacgttt ttttactata attatattac caaccatttc
    25921 actaattata ttatgttatc caagcgctga ttgaggatta acatacgagg aggtatagat
    25981 atgaatacaa aaaagaagat atcctttgcc ctgaccgctt gtctaggtct ttttttgctc
    26041 ttccctactt ctacccacgc tcattatgac cgcgcctttt ggtatgaaga acaagtgacc
    26101 acaccgcata ttgaacaata tacagactgg atgtccacaa ttcctgataa tcgttttcta
    26161 ggagagcttg ccattccggg aactcatgat agcatggctc acagtaacca tcttcctttt
    26221 cgtgatattg tccgtacgca aacaatgaat ttgcagcaac aattggagtc tggaatccga
    26281 tatttagata ttcgtctcgc atatatggga gatcactttg ctctctacca tggctcaatc
    26341 gccttgggct accaatttga agaggttctt acaactattc aaaattactt gataagttat
    26401 ccaagtgaaa ccatcttaat gcggattaaa caagagcata ctcatgcctc tgatcctgaa
    26461 atgtttaccc tttttgagtc ctattatcaa cgatattcct ctcttttctg gaatcctatg
    26521 acttcgtcaa acggatacaa tcctacacta ggcgaaattc gtggccagat tgtgctttta
    26581 cctgatgtct tgtctatcga acacggaata aattatcgtt ttgttattac tcaagatcaa
    26641 taccatctca atacaaattg ggatttatat aaaaaatggg aagctataaa gaaccatatc
    26701 aatcaggcaa atacatctag cattgatttt attttcatga attatctcag tggttctggt
    26761 ggttctttcc cttattttgt agcaagtgga catgttcgtc cagcaactga tgcttcccga
    26821 ctctctactg gattgacgga acccggtttt aggcatcgct accctgactt cccacgcaca
    26881 gcacgtctcg gtgtatttgc aacaatttcc tttgaaggaa ccaatactct tgttgcggac
    26941 tatctacgaa acaatcaaat tcgtagacca ggaatcatca tttcagattt ccccggtgaa
    27001 cgtcttatca atgaagttat acaatgcaat taccgttaat cgttctatat ttttgcatgt
    27061 ttagtattta agctaaaata ctgttctata aataacatct cgtacaatac atacctaatt
    27121 ctcaccctaa ccttccaatt ccttttacca tcaacataaa aatattcaac tgactagcga
    27181 ggaaattccc aacgggggac tcctcgtttt ttatatctta attgtcgttt caagtcaaaa
    27241 atagtcaacc actaaatttt cgataagcag actatatcat caataacaaa aaattacttc
    27301 tttcacgaaa aataaaagtg attgattgtg acatgaaaaa ttctatagga gttgtgaact
    27361 aaggatagca cagtgaaaca ttgagagcaa caataaaaaa atgcatcatt aggctgttat
    27421 agacatttag tctatcttta attacttcgt taactcgctt tgccgtactt tgcgtaagtg
    27481 acttgctttc gcaagtctca tttccagcct tgtacagtct gctagactgt acaagctgcc
    27541 tacagctttt gaggcgaatg cggttcgccc tatttccagc atcttttttc tcgctttttt
    27601 gtatctagga tcgggctgaa acagttcccc gaactgtttc actctcccag atagttggag
    27661 ctagtactaa aagtaaacta aaatataatt atttagcttt aaaatagcat tccaaacaat
    27721 actcaaccga ttgaaatctc ctcaataact caaccacttt tcttttcaat ccagcccaga
    27781 atcgttcaat tgggttaagt tcaggggaat aaggtggaag cggaagaaaa tagtgtccct
    27841 tagccactgc aagctcatct agttgtttct tgggatgaaa agctgcatta tccataatga
    27901 tgacatgggg ttctgtcaag gatggcaata gctgctcctg ataccacttg ataaataatt
    27961 ccgctgtcat cgttccatga taaagcaagg gggctataat tttagaacca gtttgaccag
    28021 ctactaccga aattctttcg aatctgcgtc cacttacctt gtcgtatact ttctctcctc
    28081 gaggtgctct agctttgtga cgataaagat aagtatcaat gcccgtctca tcaatataaa
    28141 caatcggtgt gtcaggaaag caggctaaaa catcaagata gcgtctcact ttttcgctat
    28201 cttgttcttt ataggttgtt gtcttttttt aaagtaatat tcactttttt gagtgctgcc
    28261 caaacagaag gaatactaca gttaaaatgc tctgcaattt ctttcaggaa agcatctgga
    28321 tgttccttga cataggcttc caagcggtca agcggaagtt tgcgaggact acgagagcgt
    28381 ggtttacgat tcagatgtcc ttcatttttc agctgtgtct cccaacggta caaggtatcg
    28441 gttccaatac caaataggtc acaggtttcc ttttttgtgt gtcctgattg gacataggca
    28501 ataacgcgtt ttctaaaatc aattccgtaa gtcataagtc tattttatta tatattaaat
    28561 aaaaaactaa ataactatat ctggcaagct atcgcatttg ctagataaaa aaagaatgct
    28621 ggataagatt ccaacatt
//
LOCUS       DASFQS010000014        27757 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.014, whole genome shotgun sequence.
ACCESSION   DASFQS010000014 DASFQS010000000
VERSION     DASFQS010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 27757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27757
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.014"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..167)
                     /locus_tag="U1041_000591"
     CDS             complement(<1..167)
                     /locus_tag="U1041_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEM4767719.1"
                     /translation="MLSKYVGRQTSSIENDITKTRNHSRQRGNIMRAVFGIDVSKASS
                     EVAILVNGEKV"
     gene            complement(418..1194)
                     /locus_tag="U1041_000592"
     CDS             complement(418..1194)
                     /locus_tag="U1041_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019321467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HEM4767720.1"
                     /translation="MNTRKGIIFNIQHFSLHDGPGIRTTVFLKGCPLRCPWCANPESQ
                     KRKPEPMLDAVSKKMTIMGEEKSVDDIISEVMKDIDFYEESGGGLTLSGGEIFAQYEF
                     AKAILMEAKRHGLHTAIETTAFVEHRKFVDLIQYVDFIYTDLKHYNTISHRKVTGVNN
                     NLIIQNIQYAFSIGKEIVLRIPVIPDFNNSLEDAEQFACLFNQLKIDKVQLLPFHQFG
                     ENKYKLLNRTYAMTDVKALHPEDLKDYQAIFIKHNINCYF"
     gene            1326..2069
                     /locus_tag="U1041_000593"
     CDS             1326..2069
                     /locus_tag="U1041_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000824973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM4767721.1"
                     /translation="MERLDKIIQLVSQHEKIDVNSLAEQLDVSKVTIRKDLDKLESKG
                     LLRREHGYAVLNSGDDLNIRMSFRYDVKKRIAKEAANLIADNETIMIESGSTCALLAE
                     EICKAKRNVTIITNSYFIANYVRQYDSCQIILLGGEFQKDSQVTVGPLLHKMIQFFHV
                     DKAFVGTDGYDSEHGFTGKNLMRSEVVQYMSDVAENMIVLTDSSKFTKRGTVRRFGLS
                     QVAQVITDTSISEDLVKELENARVTVRLV"
     gene            2082..3056
                     /locus_tag="U1041_000594"
     CDS             2082..3056
                     /locus_tag="U1041_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEM4767722.1"
                     /translation="MKQEKRRQLAKIAYLYYEEGKSQAEIAAETGIYRTTVSRMLTKA
                     KSEGIVKIEIQDFDRRLYRLEKYVQEKYGLKGLELVENSTDEDQLDLENRLAQAAADM
                     LTNLIDDGKKVGFSWGRSLSLIVDKIGNHRMKGVKFVPIAGGPSHIHARYHVNTLIYD
                     MANKFRGECSFINATIIQENQELAQGILSSKYFEELCADWKDLDVAAIGIGGRVDEKN
                     RQWLDMLTTADFQALSDEGAVGETCCRGLNQYGQAVVEDLQKRTIAISLDDLKEVPDT
                     IALAYGEEKAQAILAVLRAGYIHHLVTDERTIVKVLELDNDVHIHTNL"
     gene            3245..3568
                     /locus_tag="U1041_000595"
     CDS             3245..3568
                     /locus_tag="U1041_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM4767723.1"
                     /translation="MEMIVADQLIMGLIIYAGDAKSHAYQALSLVKAGEEERAEEELE
                     LADAALLEAHNMQTKFLAQEAGGAKSDITALFVHSQDHLMTSITEINLIKEIIDLRKE
                     LKKVG"
     gene            3601..3906
                     /locus_tag="U1041_000596"
     CDS             3601..3906
                     /locus_tag="U1041_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM4767724.1"
                     /translation="MVKIALFCAAGFSTGMLVNNMKIAAADAGVEVEIDAHSQGKIAD
                     YLDEIDVALLGPQVAYTLDKSKALCDEKQVPIAVIPMADYGMLDGKKVLQLALSMVS"
     gene            3919..5220
                     /locus_tag="U1041_000597"
     CDS             3919..5220
                     /locus_tag="U1041_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM4767725.1"
                     /translation="MSKIDTQKIIVPIMKFVNMKGIIALKDGMLAILPLTVVGSIFLI
                     LGQLPFEGLNAAIASIFGAEWTEPFMQVYSGTFAIMGLISCFAIGYSYAKNSGVEPLP
                     AGVLSLSSFFILLKSSYIPVDGEPIGDAIAKVWFGGQGIIGAIIIGLVVGAIYTTFIQ
                     RHIVIKMPEQVPQAIAKQFEAMIPAFVIFLLSMIVYIVSKMATNGGTFIEMIYDVIQV
                     PLQGLTGSLPGAIGIAFFISFLWWFGVHGQSVVNGVVTALLLSNLDANKALLAADKLS
                     LENGAHIVTQQFLDSFLIMSGSGITFGIVFAMLFAAKSKQYKALGKVAAFPALFNVNE
                     PVVFGFPIVMNPVMFLPFVLVPILAAFIVYGAISIGFMQPFSGVTLPWSTPAIISGFM
                     VGGWQGAVVQIIILAVSTIVYFPFFKIQDKIAYESETKEPV"
     gene            5372..7816
                     /locus_tag="U1041_000598"
     CDS             5372..7816
                     /locus_tag="U1041_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HEM4767726.1"
                     /translation="MKTVTEVAGTSIKTEYFGSLTDRMNKYREDVLDKKPYIDAERAV
                     LATKAYQEHREKPNVLKRAYMLKEILENMTLYIEEESLIAGNQASSNKDAPIFPEYTL
                     EFVLNELDLFEKRDGDVFYITEETKEQLRSIAPFWEKNNLRSRAGVLLPEEVQVYMET
                     GFFGMEGKMNSGDAHLAVNYQKVLEQGLRGFEERVREAKVKLDLTDPASIDKYHFYDS
                     IFIIIDAVKAYADRFVSLATELAEKAPTAQRRQELLEIARICAKVPYEPAETFAEAVQ
                     SVWFIQCILQIESNGHSLSYGRFDQYMYPYVKADLEAGRETEDSIVERLTNLWIKTIT
                     INKVRSQSHTFSSAGSPLYQNVTIGGQTRDKKDAVNPLSYLVLKSVAQTHLPQPNLTV
                     RYHAGLDARFMNECIEVMKLGFGMPAFNNDEIIIPSFIEKGVLEEDAYDYSAIGCVET
                     AVPGKWGYRCTGMSYMNFPKVLLITMNDGIDPASGKRFAPAFGHFKDMKSFEELETAW
                     EKTLRHLTRMSVIVENAIDIALEREVPDILCSALTDDCIGRGKHLKEGGAIYDYISGL
                     QVGIANLSDSLAAIKKLVFEEGRLTPEELWHALETDYTGERGKEIQEMLIEDAPKYGN
                     DDDYADQLVTAAYDIYIDEIAKYPNTRFGRGPIGGIRYSGTSSISANVGQGRGTLATP
                     DGRNAGTPLAEGCSPSHNMDKNGPTSVLKSVAKLPTHEIVGGVLLNQKVNPQTLAKEE
                     DKQKLIALLRTFFNRLHGYHIQYNVVSRETLIDAQLHPEKHRDLIVRVAGYSAFFNVL
                     SRATQDDIIGRTEHTL"
     gene            7831..8499
                     /locus_tag="U1041_000599"
     CDS             7831..8499
                     /locus_tag="U1041_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002898502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEM4767727.1"
                     /translation="MEFMLDTLNIEEIRKWAEVLPLAGVTSNPTIAKKEGDIDFFERL
                     HLIRDIIGPNASLHVQVVAKDYEGILADAKKIRELAPENVYIKVPVTPAGLAAMKTLK
                     AQGYQITATAIYTVFQGLLAIEAGADYLAPYYNRMANLNIDSNAVIAQLSEAIDRECS
                     ESKILAASFKNVEQVNQAFANGAQAITAGADIFEAAFSMPSIEKAVNDFADDWSAIHG
                     RYTI"
     gene            8532..9488
                     /locus_tag="U1041_000600"
     CDS             8532..9488
                     /locus_tag="U1041_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM4767728.1"
                     /translation="MKQFSGLSRTIQGNHLLDTCAIDILKIGHRPLVLCAKQEYNTTV
                     ESFVKILTCHGLIVKIAYMEEWDQNSVEEYGEVGFRHRADHIIGIGNSSVTACTKAVA
                     DLLDLPAVFIPTSPFTTLPWVSVENKKRERPLFNESIQLIIADREQLLTQPTSELING
                     VVNTLLYLAAIKEVKRNHLFSLVDDILIRGFESVLLRSSLQAIEDFEARILSKEVQDV
                     LEVLSTCVTLDLPSDAWDVIQQIESKLSERREDLVDEPLKRNVVLYLLLTYLTQESEE
                     FQARLKWCQQLLLSANSSNLLSLEAVFKEIALEIGEDRSTRC"
     gene            9609..10703
                     /locus_tag="U1041_000601"
     CDS             9609..10703
                     /locus_tag="U1041_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol dehydrogenase"
                     /protein_id="HEM4767729.1"
                     /translation="MKVFASPSRYIQGKHVLFQGAEAIGKLGTKPLILCDDLVYGIVG
                     EKFLSYLVEEGMQVHRVAFNGEASDKEIQRVVEIGKEQASDVVIGLGGGKTIDSGKAI
                     ADLLGVPVIIAPTIASTDAPTSALSVIYSEEGAFERYIFYKKNPDLVLVDTAIICQAP
                     PRLLASGIADGLATWVEARAILQSNGTTMAGGGQTLAGIAIAQACEQTLFEYGLQAMA
                     SCEAKVVTAALENIVEANTLLSGLGFESAGLAAAHAIHNGFTALEGDIHHLTHGEKVA
                     YGTLTQLFLENRPKEELEKYIRFYQALSLPTTLEELHLADAGYEDLLKVGQQATIEGE
                     TIHGMPFAISAEDVAEALMAVDYYVRSLDK"
     gene            10874..11950
                     /locus_tag="U1041_000602"
     CDS             10874..11950
                     /locus_tag="U1041_000602"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000542485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEM4767730.1"
                     /translation="MAYVVAVVGATGAVGAQMIKMLEESTLPIEKVRFLASARSAGKT
                     LQFKGQDIVIEETIETAFEGVDIALFSAGGSTSAKYAPYAVKAGAVVVDNTSYFRQNP
                     DVPLVVPEVNAHALDNHNGIIACPNCSTIQMMVALEPVRQKWGLERIIVSTYQAVSGA
                     GMGAILETQAQLRAVLNDGVAPKAVEANILPSGGDKKHYPIGFNAIPQIDLFTENDYT
                     YEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEIAPIDEVKAAIAAF
                     PGAVLEDDVANQVYPQAVNAVGSRDTFVGRIRKDLDKENGIHMWVVSDNLLKGAAWNS
                     VQIAETLHERGLVRPTAELKFELK"
     gene            12023..12958
                     /gene="dapA"
                     /locus_tag="U1041_000603"
     CDS             12023..12958
                     /gene="dapA"
                     /locus_tag="U1041_000603"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEM4767731.1"
                     /translation="MSIQDLRDVKIITAMITPFKEDGAINYDVLPELVEHLLAHHTEG
                     ILLAGTTAESPTLTHAEELELFAAVQKIVNGRVPLIAGIGTNDTRDSIEFAKEVAAFG
                     GFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVEMTPETMLRLAE
                     HPNIIGVKECTSLANMAYLIEHKPEDFLIYTGEDGDAFHAMNLGADGVISVASHTNGD
                     EMYEMFTAIEQQDIRTAAAIQRKFIPKVNALFSYPSPAPVKAVLNYMGFEVGPLRLPL
                     VPCPEEDAKRIIKVVVDGDYEATKATVTGVVRPDY"
     gene            13327..14679
                     /locus_tag="U1041_000604"
     CDS             13327..14679
                     /locus_tag="U1041_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM4767732.1"
                     /translation="MNIVIIGASFAGLSAALECRKLYQNAQITLIDREKDVAYFPNTL
                     NWKVAGKVSGWEEAKISLFSEVQHAAISCLFETECLAVYPEMRKVKIRHHQDIGDIIY
                     DRLILAMGASQTWEWGTEELQDYLIRSKTLSQAQASLEKLTNAKTVAVIGAGQIGLES
                     LDALSQLDLNLHVFEAQDSLLAKYVDEDMIASIRQEMEKRGIQLHLSETVNQITIDTQ
                     EEQLVCHTVTGNYPADLVLPSTNLTPNIQLVKDRLKVTAEGTVWVDEFLETSQENIFA
                     VGDLVSLPVDYFGQAYLPMIHHAIMTGRMAARNLQKRIAPIKRAQRIVSSHVFGYYIT
                     SLGLTESEASLWLESKSIRIRRSYSQWEPTLVDFKLIVEETSGRIIGGQLVSTADYIE
                     QMDVLSLAISKDLTVFDLVEHSWLCLPGNTPLVPFIVEAAQEYIRQFYQVDGEGVYAD
                     "
     gene            14669..16132
                     /locus_tag="U1041_000605"
     CDS             14669..16132
                     /locus_tag="U1041_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4767733.1"
                     /translation="MRIDSLLEKRERAIYQLLLYLEDRKEAPSLKDICHYLELSKSTL
                     LRYIVSFNEEAEVTDLGLSFQFEDEKVFLKKKASLSLHRILAYLCQTSTKYQIIVYLS
                     DKEEVSIQQLAQELLISEATLNRHLASLNQILAEFGIGIKSGRLKGSELQIRYFLHQM
                     LSLTTTRAELQEEFMLGKIEALLPVFERFYQSPLNPKQAHRLLLWLMISQQRSRLRQL
                     DFKHLYKLMEPYQEHKFYRRLRKMYFTLSQQQSTSFQEGEIMALFAFLFSHFILAPHQ
                     LEQVLGFGGPIMEATSLALQKLRLYFEGNLPVSEEALYHLNQIMSQLYFFYSSLELEE
                     VEASSFYPEAEDLLKDVYKSVFHRKVDKEIRNSYLTNIAVLYIYFSQVQPIQVKVAFA
                     SSLHEVLSYPLLLQLREKLEGNRQVLIEPYQAGYDYDLIITDYLENTSIPVYCLGNRL
                     KIQDIVQLKAWIQDIYHQKSCQSEIMATKTSFPIEHR"
     gene            16361..17875
                     /gene="glpK"
                     /locus_tag="U1041_000606"
     CDS             16361..17875
                     /gene="glpK"
                     /locus_tag="U1041_000606"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEM4767734.1"
                     /translation="MSTEKYIMAIDQGTTSSRAIIFNKKGEKVGSYQKEFTQIFPKPG
                     WVEHNANEIWNSVQSVIAGSFIESGVRPDQIEGIGITNQRETTVVWDKETGLPIYNAV
                     VWQSRQTAHIADQLKADGHADMIHQKTGLVVDAYFSATKVRWILDQVPGAQERAEKGE
                     ILFGTIDTWLVWKLTDGKCHVTDYSNAARTMLYNIEELKWDDEILSLLNIPKAMLPEV
                     RSNSEVYGTTAPFHFYGAEVPISGMAGDQQAALFGQLAFEPGMVKNTYGTGSFIVMNT
                     GEEMQLSQNNLLTTIGYGIGGKVYYALEGSIFIAGSAVQWLRDSMRMVTTSPESEELA
                     RKSTSNDEVYVVPAFTGLGAPYWNSDARGSVFGLTRGTTKEDFVKATLQSIAYQVRDV
                     IDTMQLDTGIDISVLKVDGGAAMNSLLMQFQADILGIEIARAQNLETTALGAAFLAGL
                     AVGFWKDLDELKELNAVGQSFQPTMNEARKEQLYKGWKKAVAATQLFAEVDEEQ"
     gene            17951..19780
                     /gene="glpO"
                     /locus_tag="U1041_000607"
     CDS             17951..19780
                     /gene="glpO"
                     /locus_tag="U1041_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glycerol-3-phosphate oxidase"
                     /protein_id="HEM4767735.1"
                     /translation="MEFSKETRRLAIERMQDRQLDLLIIGGGITGAGVALQAAASGME
                     TALIEMQDFAEGTSSRSTKLVHGGLRYLKQFDVEVVSDTVSERAVVQNIAPHIPKPDP
                     MLLPVYDEPGSTFSLFRLKVAMDLYDLLAGVNNTDLANKVLTKEEVLEREPNLKQEGL
                     IGGGVYLDFRNNDARLVIENIKRAAKDGALIASRVKAEKFIKDEVGKVVGIIARDLLT
                     DRTFEIRARLVINTTGPWSDEVRNLDGEGSGVLQMRPTKGVHLVVDSSRLSVPQPTYF
                     DTGYADGRMVFVLPRENKTYFGTTDTDYTGDLANPMVTQEDVDYLLDIVNNRFPEANL
                     TLDDIESGWAGLRPLLSGNGASDYNGGNNGKLSDDSFNSLIETVKGYLNNEKTRDDVE
                     HDLTHLEGSVSEKHLDPSAVSRGSALDRDDNGLLTLAGGKITDFRKMAEGALEKVADI
                     LKEEHGRSFKLINSKTYPVSGGELNPANVAEEIEHLAQLGVKKGLVYDDALYLANLYG
                     SNATKVFALNHKVEAVSGLNKRDLLSLHYAMKEEMTLTAVDYLLRRTNYMLFMREQLD
                     AVAPEIIKEMAAYYAWSEEEVAQQEQLLADTLVKNDLTYLKEK"
     gene            19794..20501
                     /locus_tag="U1041_000608"
     CDS             19794..20501
                     /locus_tag="U1041_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM4767736.1"
                     /translation="MTNELIGEVLGTALLILLGNGVVAGVVLDKSKAKDAGWIVITIG
                     WGLAVAMAAFVSGLLGPAHLNPAVSIAMAFAGNLPWGSVVPYILAQFIGAFIGSILVY
                     LMYKDHYDATEDTGAVLATFSTGPAIRNLVSNTISEAIGTFVLVLGLLAFGQYDFPTG
                     LGTLIVGGLIVSLGVSLGGPTGYALNPARDLGPRIMHAILPLKHKGDSDWGYALVPVA
                     GPIIGGLLAAVLYGLIF"
     gene            20633..21583
                     /locus_tag="U1041_000609"
     CDS             20633..21583
                     /locus_tag="U1041_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4767737.1"
                     /translation="MNNTGIHHISSLVGNIHQAYHFYHHILGLKLTLKTVNQEDSSMY
                     HLFFGDEEGRFGTEFTIFDMPNHPSHRSGTNRLERTVFLVKDFAALEFWQKRLTEFEV
                     ENEGIQAFGNGHILNFQDEDGQLLGLTYHESVGEMFPYKIDEIPLEYAILGIASLHMR
                     IREEKELLSLLTETFGFVEESRFVFEDKMVISLLFDNTFQHRLYLILDQESPISVMGV
                     GAIHHIAFSVLDESDLEDLISRLNLINRPHSGIINRDFMHSLYFRAPNYLMFEVATMT
                     GERESKMPAQNEELDQVDLFLPSFFEEDRQDIEKNLSQRY"
     gene            21806..22198
                     /locus_tag="U1041_000610"
     CDS             21806..22198
                     /locus_tag="U1041_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767738.1"
                     /translation="MRLSAFLDFWQDLDIRDYRQITFVGFSNGANFIMGLLTKQANLA
                     DNYILLHRSALDYTFPMENSRAEILFTLGQNDQLVDPVALEHLVDDWQASAFPRAYLV
                     RFDKGHFLSQDELTYIKNWYQERIDKKT"
     gene            complement(22227..24017)
                     /gene="pepF"
                     /locus_tag="U1041_000611"
     CDS             complement(22227..24017)
                     /gene="pepF"
                     /locus_tag="U1041_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEM4767739.1"
                     /translation="MTNAMPKRQEIDVQLTWDTDILFPTPDNYKENLAAYAKQVTAFE
                     SNYKGKLTDKDTIVSALTEYEKIVILDSRLSHYAFLPLEVDKMNTELASLANEYDLVS
                     AKARPQRDCLYSELGQLDEAFLLELKEEQPQWAAFFDAILRDKPHQLHPLQEELLSNF
                     APTFGQPYNNYGVTKFEDMTFDNFEANGQTLGNSYVLFENDYELSHDTEIRRNSAAGF
                     YSTLKKYKNTTAATYLSHIKNEQIEARLRGFDNTIDFLLHRQNVSRDLFDRQIDVIMK
                     ELAPHMRRYVKLVAKAHGLDKITHADLKISLPSEYNQRITPEESKQFLIDCLGILGED
                     YVKMIEQSFDERWIDFAQNEGKATGGFCATLYDGPSYILLSWTGLMNEVLVLAHELGH
                     AGHFQLAKKQSVLSYDPSLYFIEAPSTANEVLTCNTLLKNNQDPGFQAYLISELISRT
                     YFHNMVTHLLEAAFQREVYTRLDNEEYLNGDILCQIKLDVIKEFWGEDFEIGDDAGLI
                     WMRQPHYYIGLYPYTYSAGLTIGTAMAKQLEEHPEEVVEKWLETLSLGASLSAQDLAK
                     HAGVDVSTDQPLKETIAYVGSLVDKLETLI"
     gene            24185..24523
                     /locus_tag="U1041_000612"
     CDS             24185..24523
                     /locus_tag="U1041_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002264292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767740.1"
                     /translation="MQVIKRSGEIVEFDPDKIYQAIIKAAQTVYVIDETWRKNLAQVT
                     KKVVLDLEEAHTERPTISMVQSQVEHRLLDAGYISIAEHYISYRLQRDLERNGYGDKI
                     IVHLRFEQVR"
     gene            24709..26076
                     /locus_tag="U1041_000613"
     CDS             24709..26076
                     /locus_tag="U1041_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019768617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM4767741.1"
                     /translation="MAKIVVVGANHAGTAAIKTMLTNYGQENEIVVFDQNSNISFLGC
                     GMALWIGEQIGGPEGLFYSNKEELESLGATVYMESPVTNIDYDAKTVTALVNGQEHVE
                     SFEKLLFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIEKLKNKDI
                     NRVAVVGAGYIGVELAEAFQRKGKEVILIDVVDTCLAGYYDRDLSDLMAKNLEEHGIQ
                     LAFGETVQEVAGDGKVEKIITDKNEYDVDMVILAVGFRPNTAFAGEGIERFRNGAFLV
                     NKRQETSIPGVYAIGDCATIYDNATGDTSYIALASNAVRTGIVAAHNICGTDLEGIGV
                     QGSNGISIYGLNLVSTGLTLEKATRLGLNAAVTEVTDNQKPEFMEHGNFPVTIKIVYD
                     KDSRRILGAQMAAREDISLGIHLFSLAIQEGVTIEKLALTDLFFLPHFNKPYNYITVA
                     ALGAE"
     gene            26217..27428
                     /locus_tag="U1041_000614"
     CDS             26217..27428
                     /locus_tag="U1041_000614"
                     /inference="COORDINATES: protein motif:HMM:NF014691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4767742.1"
                     /translation="MYKRLEIVSYSDFDNYEAEYQKRFDSLATIKTGLTINPFSKREQ
                     RRLADKHQLFYVLLPNHVMDIEKIYKNSQLLSNFDLSSVQMQKLFYLQIIDEIQSTND
                     MEGVKSTRKEIKEAYNSLDKNKRFSGIVSMYHSILKNEFEKIDSLSKFRNIYDQLFLD
                     EMSEDEKPDGELFRKKVIYVGDGNSYVHQGNSSEFSINEDLTKLIIFMNNPEIPLIIK
                     SIITHYFFEYVHPFYDGNGRMGRFLMSSYLSRKLDFLTGLSLSESVLQNKSKYEEGFS
                     ITSHPKNRGDLTPFVGTMLEIILNAQENMKTKLGKLKSQLDRVWILIDGLDLTGPQKE
                     LLFILSQDKLFDVLHTGVSNKELTEAFGGKYKRTRIDSTLKTLEGMGLVTKVKSSPVI
                     YEVSSNLIKDI"
BASE COUNT         8280 a         5120 c         6178 g         8179 t
ORIGIN      
        1 tgaactttct caccattgac tagaatggcc acttctgaac ttgccttact cacatcaatc
       61 ccaaaaactg cacgcatgat attacctctt tgtcttgaat gattccttgt tttagtgatg
      121 tcattttcaa tactcgacgt ctggcgtccc acatactttg ataacattct ttctaaaaca
      181 ggtgccttgc cagtttttga tgcgacgtct agcgtcaaaa gagttctcga cttaacaaga
      241 cacctctact ttaacataaa gaaaaagtag tgactactct ctcccgtcgg agatttcctc
      301 actactaatc ttagtatgtt tttgacttag tcgagttctt tcccgctccc atttcagtat
      361 gtgatttcta taggaatgct attggatcag ccgaggaagt ttttgtattt ctcaaagtta
      421 gaaataacag ttgatattat gtttgatgaa gattgcttga tagtctttta aatcttctgg
      481 atggagagcc ttgacatcgg tcatagcata ggttcgattg agaagcttat acttattttc
      541 tccaaattga tggaagggga gtagttgaac tttgtcaatc ttgagttgat taaagagaca
      601 ggcgaattgt tcagcatctt cgagggaatt attaaagtca gggataacag ggatacgtag
      661 gacgatttct ttcccgatgg aaaaggcgta ttggatattt tgtatgataa ggttattgtt
      721 gacgccggtg acttttctat gagaaattgt attgtaatgt tttaaatcag tatagataaa
      781 gtcaacgtat tggataaggt caacaaattt gcggtgttct acgaaagcgg tggtttcaat
      841 cgcggtatga aggccgtgtc tttttgcctc cataagaata gctttcgcaa actcatattg
      901 ggcaaaaatt tctccgccag acagcgtgag cccaccacca gattcttcat aaaaatcaat
      961 gtctttcatg acttcggata tgatgtcatc aacagatttt tcttctccca tgatggtcat
     1021 ttttttacta acagcatcaa gcatgggttc aggttttcgt ttttgagatt ctggatttgc
     1081 acaccaagga caacgtaggg ggcagccttt caagaaaact gtcgtacgta tacctggacc
     1141 gtcatggagt gaaaaatgtt gaatgttaaa aataatgcct tttcgtgtat tcatactctt
     1201 tctccttttc gattaatttg attttatcac acaaaagaaa gttttacaat tacgaacgta
     1261 agtttaaaag ttgcaaatag ttgaaaaaga gtcaaaattt gatagaataa tgatgaggtg
     1321 atgaaatgga acgattagat aaaattatac aactggtatc acaacatgaa aaaatagatg
     1381 tcaatagttt ggcggagcaa ctggacgtgt ctaaggtaac catccgtaaa gatttagata
     1441 agttagaatc aaaaggttta ttacgtagag aacatggcta tgctgttcta aatagtggtg
     1501 atgaccttaa tattcggatg tcctttcgct atgacgtaaa aaaacgaatt gcaaaagaag
     1561 cagcaaatct tattgccgac aatgaaacga ttatgataga gtctgggtca acttgtgctc
     1621 tcttggcaga agaaatttgc aaagccaaga gaaatgtgac cattataaca aattcttatt
     1681 ttatagccaa ttatgtgcga caatatgata gctgtcagat tattttattg ggtggtgagt
     1741 ttcaaaaaga ttcccaagta acagttgggc cgctcttgca taaaatgatt cagtttttcc
     1801 atgttgataa ggcttttgta ggaactgacg gctatgatag tgagcatggt tttacaggta
     1861 aaaacttaat gcgaagcgaa gtagtgcagt acatgtctga cgttgctgaa aacatgattg
     1921 tgctaaccga ttctagtaaa tttacaaagc gagggacagt acgcagattt ggtttaagtc
     1981 aagttgctca ggtcattaca gatacgtcga tttctgaaga tcttgtcaag gaattagaaa
     2041 atgctagagt cacagtaagg ctagtttagg ttgggggcag tatgaagcaa gaaaaaagaa
     2101 ggcagttggc aaaaatagcc tatctttact acgaagaggg gaaaagccaa gctgagattg
     2161 ctgctgagac aggaatttat agaacgacag tcagtagaat gttgaccaag gctaagtcag
     2221 aaggcattgt aaaaatagaa attcaagatt ttgataggcg cctatatcga ctagaaaaat
     2281 atgttcaaga aaaatatgga ttaaaaggtt tagaactggt tgaaaacagc accgatgagg
     2341 accagcttga tttagaaaat cgtctggcac aggctgcagc cgatatgctt accaatctaa
     2401 ttgatgatgg aaagaaagtt ggtttttcat gggggagaag cctcagtctt attgtagata
     2461 agataggaaa tcatcgtatg aaaggtgtca aatttgttcc aatagctggc ggtccaagtc
     2521 atatccacgc acgttatcat gtgaatactc tgatttacga tatggccaat aaatttcgtg
     2581 gagaatgtag ttttatcaat gcgacgatta tccaggagaa tcaagaactt gctcaaggta
     2641 ttctttcttc taaatatttc gaggagctat gtgctgactg gaaggactta gatgtagcag
     2701 caataggtat tggcggtcga gtcgatgaaa aaaatcgtca atggttagat atgttgacga
     2761 cggctgattt tcaagccttg tcagatgaag gtgccgttgg tgaaacctgc tgtcgtggtc
     2821 tgaatcaata cggacaagct gttgttgagg atttgcaaaa gaggaccatt gccatctctt
     2881 tagatgattt aaaagaagtt ccagatacca tagctcttgc atacggggag gaaaaggctc
     2941 aagccatttt agctgtattg cgagctggct acattcatca tctggtcaca gatgaacgaa
     3001 caatcgtaaa agttttagaa ctggataatg atgtgcatat ccatacaaat ttgtaagaga
     3061 gtacttcaat cgcttaaagg tggttgaagt atttttctat cccaaaaaat gcacaaaagt
     3121 gcagaaatat attaaaacag aaaatgttct ataaatatat ttacgctata aagagaaaat
     3181 gatatgattt agttacgaaa gaaatataat aacttacaaa taaaacaaat cggaggaaaa
     3241 agaaatggaa atgattgttg cagatcaatt gatcatggga ttgattattt atgctggaga
     3301 tgcgaaaagt cacgcttacc aagctttgtc gcttgtcaaa gcaggtgaag aagagcgagc
     3361 agaagaggaa ttagaattgg cagatgcagc attattagaa gctcacaata tgcagacaaa
     3421 attcttagca caggaagctg ggggagcaaa atctgatatt acagcactat ttgtccattc
     3481 gcaagatcat ttgatgacat ccattacaga gatcaatttg attaaagaaa tcattgattt
     3541 gcggaaagaa ctaaaaaaag ttggctaaaa caaaaaaatt atatttagga ggaaaccgaa
     3601 atggttaaaa tcgctctatt ttgtgccgct ggtttttcta caggcatgtt ggtaaacaac
     3661 atgaagattg cagcagcaga cgcaggtgtc gaagtagaaa tcgacgcgca ttcccaaggg
     3721 aaaattgcag attaccttga cgaaatcgat gtagctttac tgggaccaca agtagcatat
     3781 acgcttgata agtcaaaagc gctctgtgat gaaaagcaag tccctattgc cgtgattcca
     3841 atggcagact acgggatgtt ggacgggaaa aaagttcttc aattggcact cagcatggtt
     3901 tcataaagga gtatggtcat gtccaaaatt gatacacaaa aaattattgt cccaatcatg
     3961 aaatttgtga atatgaaagg aatcatcgct ctaaaagatg gtatgttggc tatcttacct
     4021 ttaacagtag tcggtagtat tttcttaatt ttggggcagt tgccttttga aggcttaaat
     4081 gctgcaatag cttctatatt tggagcggaa tggactgaac cgtttatgca agtctatagc
     4141 ggaacctttg cgattatggg cttgatttct tgttttgcga ttggttattc ttacgccaaa
     4201 aatagtggag ttgagcctct ccctgcgggc gtactgtcct tgtcttcatt ctttatcctc
     4261 ttgaaatcat cttatattcc agttgatgga gaaccaatcg gtgatgccat cgcaaaagta
     4321 tggtttggtg gtcaaggaat tatcggtgcg attattattg gtttggtagt gggcgctatc
     4381 tatacgactt ttattcagcg tcatattgtt atcaagatgc ctgaacaagt accgcaagct
     4441 attgccaagc agtttgaagc tatgattcca gcttttgtca tctttttgct atctatgatt
     4501 gtctatattg tttccaagat ggcgacaaac ggtggtacat tcattgaaat gatttacgat
     4561 gtgattcaag tgccactaca aggtttgact ggttcattac caggtgcgat tggaattgct
     4621 ttcttcattt ccttcctctg gtggtttggt gtacatggcc agtcagttgt caatggtgtc
     4681 gttactgctt tactattgtc aaacctcgat gccaataagg cccttttagc agcagataaa
     4741 ttgtcactgg aaaatggcgc ccacatcgtg acccaacaat tcttagatag tttcttgatt
     4801 atgtcaggtt caggtattac cttcggtatt gtttttgcaa tgctatttgc cgctaaatca
     4861 aaacaatata aggctcttgg taaggtagcg gcctttcctg cactctttaa cgtaaatgaa
     4921 ccagtcgtct ttggttttcc aattgtgatg aatcctgtaa tgttcttacc atttgttttg
     4981 gtaccgatct tagcggcttt cattgtctac ggtgcaatct caataggctt tatgcaacca
     5041 ttttcaggtg tgaccctacc atggtctacc ccggcaatca tttctggttt tatggtgggt
     5101 ggttggcaag gtgcagttgt tcaaatcatt attttagctg tctcaactat tgtttatttc
     5161 ccattcttca aaatccaaga taagattgcc tatgaaagtg aaacgaaaga accagtttag
     5221 tcaatgatgt cagacaaaag agttgcacaa atgtgcagcc ggcttcggaa atcttagctc
     5281 tcactagcat caattgacaa taacccctat tacaggatat acttaattta caaacgaaac
     5341 aaaattaagt ttcgaaagaa agggtaaaac tatgaaaaca gtgactgaag tagctggcac
     5401 tagcattaaa acagagtatt ttggaagtct gacagatcgg atgaacaaat acagagaaga
     5461 tgtccttgat aagaagccct atattgacgc ggaacgggct gttttagcaa caaaagccta
     5521 tcaagaacat agagagaagc ccaatgtatt aaaaagggcc tatatgctca aggaaatatt
     5581 ggagaacatg acgctttata ttgaagaaga aagtctgatt gcaggtaacc aagcttcttc
     5641 aaataaagat gctcccatct tcccagaata taccttggag tttgtgttga atgaattgga
     5701 tttattcgaa aaacgggatg gggatgtctt ctatattacc gaggaaacta aggagcagtt
     5761 gcgcagcatc gctccattct gggaaaagaa taatcttcgt tcacgtgcag gtgtcttgct
     5821 tccagaagaa gttcaagttt atatggaaac tggcttcttt ggtatggaag gtaagatgaa
     5881 ctctggcgat gcccacttgg ctgtcaatta ccaaaaggta ttggaacaag gtctgcgtgg
     5941 ttttgaggag cgagttcgtg aagcaaaggt taagcttgat ttgacggatc ctgcaagtat
     6001 tgataagtac catttctatg attcaatctt tatcatcatt gatgcggtga aagcatacgc
     6061 agatcgtttt gtctccttgg ctactgaatt ggcagagaaa gcaccaacag ctcaacgccg
     6121 tcaagaacta ctggagattg cacggatttg tgcgaaggtg ccgtatgaac ctgctgaaac
     6181 atttgcagag gcagtgcaat ctgtctggtt tatccagtgt atcttgcaaa tcgagtcgaa
     6241 tggacattct ctatcctatg gacgtttcga ccaatacatg tatccgtatg taaaagctga
     6301 tttagaagca ggacgtgaaa cggaagacag catcgtagaa cgcttgacta acttgtggat
     6361 taagaccatt actatcaaca aggttcgtag tcaatcacat accttctcat ctgctggtag
     6421 tccactatac caaaatgtaa ccattggtgg acaaacacgt gataagaagg atgctgtcaa
     6481 tccactttct tacttagtat tgaaatctgt tgcccaaaca cacctgccac agccaaactt
     6541 gactgttcgc tatcatgcag gcctagatgc tcgcttcatg aatgaatgta ttgaagtcat
     6601 gaaacttggt ttcggtatgc ctgccttcaa caacgatgaa attatcattc catcctttat
     6661 cgagaaaggt gtcttggaag aagatgccta tgactacagt gcgattggct gtgtagaaac
     6721 ggctgttcct ggtaaatggg gataccgttg tacaggtatg agctatatga acttcccaaa
     6781 agttttattg attaccatga atgatggtat cgatcctgca tcaggcaaac ggtttgctcc
     6841 tgcctttggt cacttcaaag atatgaaatc ctttgaggag cttgaaacgg catgggaaaa
     6901 gacgcttcgc catctaacac ggatgagtgt catcgttgaa aatgcaattg acattgcttt
     6961 agaaagagaa gtaccagaca ttctctgctc agctctgaca gatgactgta tcggtcgtgg
     7021 caagcacctg aaagaaggtg gagcgattta cgattacatt tctggtctgc aggttggcat
     7081 tgccaattta tctgattctc tagcagcaat caaaaaatta gtctttgaag aaggacgatt
     7141 aacaccagaa gaattatggc atgctttgga aacagactat actggtgagc gtggtaagga
     7201 aatccaggaa atgttgattg aagatgcacc aaaatatggt aacgatgatg attatgcaga
     7261 ccaattggta acagcagcgt atgatattta tatcgatgag attgccaaat atccaaacac
     7321 tcgctttggt cgtggtccga ttggtggtat ccgttattca ggtacatcat ccatttcagc
     7381 caatgtcgga caggggcgtg gtacgttggc aactccagac ggtcgcaatg caggcacacc
     7441 gttggcagaa ggttgttctc catcacataa tatggataaa aatggaccga catccgtttt
     7501 gaaatcagtt gccaaattac caacacatga aattgttgga ggcgttctac tcaatcagaa
     7561 ggtcaatcca caaacacttg ccaaagaaga agacaaacaa aaattaattg ccctcttgcg
     7621 gacattcttt aaccgcttgc atggctatca tattcagtac aatgttgtct ctcgagaaac
     7681 cttgattgat gcacaactac atcctgaaaa acaccgtgat ttgattgtcc gtgtagcagg
     7741 ttattcagca ttcttcaatg tattgtcgag agcaacacaa gacgacatca ttggtcgtac
     7801 agagcataca ttgtaaaaga ggttattatt atggaattca tgctggacac cttaaatata
     7861 gaggaaatac gaaaatgggc tgaggttcta ccccttgcgg gggtgacctc aaacccaacg
     7921 attgcgaaga aagaaggtga cattgacttt tttgaacgtt tgcatcttat ccgtgacatc
     7981 atcggtccaa atgcttcact acatgtgcaa gttgtggcaa aggattatga agggattttg
     8041 gcagacgcta aaaaaattcg tgaattggca ccggaaaatg tctatattaa ggttccggta
     8101 acgcctgctg gtttggctgc tatgaaaaca ttgaaagcgc aaggttatca gattacagca
     8161 acagcgattt ataccgtttt tcagggcttg ttagctattg aagcgggtgc agattactta
     8221 gcgccgtact acaatcgcat ggccaatctg aatattgatt cgaacgcggt catcgctcag
     8281 ttatcagaag cgattgatag ggagtgttcg gaaagtaaaa ttttagcggc gtcattcaaa
     8341 aatgtggagc aagtaaacca agcatttgca aatggagcgc aggctattac ggcaggtgca
     8401 gatatatttg aagcagcctt ttctatgcca tccattgaaa aggcggtaaa tgattttgca
     8461 gatgattggt ctgccattca tggaaggtat actatctaaa catttctata ttataaaata
     8521 aggggggcac tatgaaacaa ttctcaggtc tttcacgcac tatccaagga aatcatcttt
     8581 tagacacttg tgcgattgac attttgaaaa taggtcatcg cccccttgtt ttatgtgcaa
     8641 aacaggagta taatacgact gtagaaagtt ttgtgaaaat tttaacttgt catggactca
     8701 ttgttaaaat agcctatatg gaggagtggg accagaactc ggttgaagaa tatggggaag
     8761 ttggtttccg acatcgtgca gaccatatta ttggcattgg taatagttct gtgacagctt
     8821 gtacaaaggc tgttgcagat ttactagact tgccagctgt ttttataccg acttcaccgt
     8881 ttaccactct cccttgggta tcggtggaaa ataagaaaag ggagcgacca ttgtttaatg
     8941 agtccatcca gctaattata gcggataggg agcaattatt gacacaacct acctcggagt
     9001 tgataaatgg agtggtcaat actcttcttt atctagcagc cataaaagaa gtaaaaagaa
     9061 atcatctatt cagcttggta gatgatattc ttatcagagg ttttgaaagc gttttattaa
     9121 gaagtagtct tcaagctata gaggattttg aagctcggat attatcaaaa gaagtacaag
     9181 atgtcttaga agttctttct acttgtgtaa cattagacct gcctagtgat gcttgggacg
     9241 tgattcaaca aatagaatca aagctcagcg aaagaagaga ggatttagtg gatgagccat
     9301 tgaaacgaaa tgttgtcctc tacttgcttc tgacctattt gacacaggaa tcagaagaat
     9361 ttcaagccag gctgaagtgg tgtcaacagt tgcttttgtc tgccaactct agcaatctat
     9421 tgtcgctgga ggccgttttc aaggaaattg cactagagat aggagaagat cgctcgacac
     9481 gttgctagta ggcaccgctg tacaatggca atatttaaaa tacgggctca tgcttcttgc
     9541 tttcggcaat gctaactgtc gtttattact caatataaca ctatctatta tttcaaggag
     9601 gaattcttat gaaagtattt gcaagtccat ctcgctatat tcaaggtaaa catgtccttt
     9661 tccaaggtgc agaagctatc ggaaaattgg gaacaaagcc tttgattctt tgtgatgatt
     9721 tagtatatgg gattgtcggt gagaagtttt tgtcctatct cgttgaagaa gggatgcaag
     9781 tccatcgtgt tgcctttaat ggagaagcat ctgacaagga aatccagcgc gtcgtagaaa
     9841 tcgggaaaga acaggctagt gatgtcgtaa tcggtctagg tggtggtaag acaattgact
     9901 caggcaaggc gattgctgat ttactagggg tgccagttat cattgctccc actattgctt
     9961 caacagatgc tccgacatct gctttatctg tcatttattc tgaagaaggg gcgtttgaac
    10021 gctatatttt ctataagaaa aatccagatc ttgtcttagt agatacagcg attatttgtc
    10081 aagcaccgcc acgtcttttg gcttctggta ttgcggatgg cttggcgacg tgggtagaag
    10141 cgcgtgctat tttacaaagc aatggaacaa caatggcagg aggaggtcag acacttgctg
    10201 gtatcgctat tgcgcaagcc tgtgaacaaa cactctttga atacggactt caagccatgg
    10261 ccagctgtga agccaaggtt gtgacagctg ctttagagaa tattgttgaa gccaatacct
    10321 tgctaagtgg tttaggcttt gaaagtgcag gtttggctgc ggcgcatgcg atacacaatg
    10381 gattcaccgc cttggaggga gacattcacc atttgacaca tggtgaaaaa gtggcttatg
    10441 ggaccttgac ccagctcttc ttggaaaacc gtccgaaaga agaattggaa aaatacatcc
    10501 gtttctatca agccttgagt cttccaacaa ctttggagga gttacatttg gctgatgctg
    10561 gttatgaaga tctattgaaa gtcggccaac aagcgacgat tgaaggagaa acaattcacg
    10621 gtatgccatt tgctatttca gcagaagacg ttgcagaagc tctgatggct gttgactact
    10681 atgttcgctc gttagataaa taagaagagc attcacagtt gagcatgtcc atctaaactt
    10741 gtgaatagag aggttcgaag taattgcctt gggaaattct ttctcagggc ttttcatttg
    10801 aaaaaattat gatataattg ttaaatataa aatatttaga aaattttgaa gaattgattt
    10861 aaaggagatt tctatggctt atgtagtagc tgttgttggt gcgactggtg cagttggtgc
    10921 ccaaatgatt aaaatgttgg aagaatcaac tcttccaatc gagaaagtac gtttcttggc
    10981 ttctgctcgt tcagcaggca agaccttgca gttcaaggga caggacattg tcattgaaga
    11041 aacaatagaa acagcttttg aaggagtcga tattgccctt ttctcagctg gtggctctac
    11101 atctgccaag tacgctcctt atgctgtgaa agctggtgca gttgtcgttg ataacacctc
    11161 ttatttccgt caaaatccag atgtaccttt ggttgttcct gaggtgaatg ctcacgcgct
    11221 tgataatcac aatggtatca tcgcctgccc taactgttcg accattcaga tgatggttgc
    11281 tcttgaacct gttcgtcaga aatggggctt ggagcgcatc atcgtttcga cttatcaggc
    11341 agtttctggt gcaggtatgg gagctatctt ggaaacccaa gctcaactgc gtgcagtctt
    11401 gaatgacggc gtggcaccaa aagcggtaga agcgaatatt cttccttctg gtggcgataa
    11461 gaagcactac ccaatcggtt tcaatgctat tccgcaaatt gacctcttca ctgaaaatga
    11521 ctacacttat gaagagatga agatgacaaa agagactaag aaaatcatgg aagatgacag
    11581 tattgctgtt tctgcaacct gcgtccgcat tccagtcctg tctgcccact ctgagtctgt
    11641 ttacatcgaa actaaggaaa ttgctccaat tgatgaggta aaagcagcca ttgcagcttt
    11701 cccaggcgca gttttggaag atgatgtggc aaaccaagtc tatccacaag ctgtcaatgc
    11761 agttggtagc cgcgatacct ttgtcggtcg tatccgtaag gatttggata aggaaaatgg
    11821 tatccatatg tgggttgtct ctgacaactt gcttaaaggt gcagcttgga actctgttca
    11881 aatcgctgaa acgctccatg aacgtggtct agttcgtcca acggcagaat tgaagtttga
    11941 attgaaataa ttttattaac caaaagtaca caaaaggctg cactcagcct tttttagcaa
    12001 caatcagtaa gagaggaagc ctatgtctat tcaagattta cgtgatgtaa aaatcataac
    12061 agccatgatt acgcccttta aagaagatgg tgcaattaac tatgatgtgt tgccagaatt
    12121 ggtcgaacat ttattggctc atcatacgga aggaattttg ttggcaggaa caactgccga
    12181 aagtccaaca cttacacacg cggaagaatt agaattgttt gcggcggtac aaaaaattgt
    12241 caacggtcgt gttccattga ttgcaggtat cggtacaaat gatacgcgag actcgattga
    12301 gtttgccaaa gaagtagcgg cattcggagg ctttgcggca ggtcttgcca tcgtgcctta
    12361 ttacaacaaa ccttctcaag agggaatgta tcaacacttc aaggctattg cggatgcctc
    12421 tgatttgcca atcattatct acaatatccc aggtcgtgtc gtggttgaaa tgacaccaga
    12481 aaccatgtta cgtttggctg agcatccaaa tatcatcggt gttaaagagt gtacaagcct
    12541 tgccaacatg gcttacctaa ttgagcataa accagaagac ttcttgattt atacaggtga
    12601 ggacggcgat gcctttcatg ctatgaacct tggagccgat ggtgtgatct ccgttgcttc
    12661 acataccaat ggtgatgaaa tgtatgagat gtttactgct attgagcagc aagatatccg
    12721 aacagcagct gccattcaac gcaagtttat tccgaaagtt aatgctttat tctcttatcc
    12781 aagtcctgca ccagttaaag cagttcttaa ctatatggga tttgaagttg gtccactccg
    12841 cttgccgttg gttccatgtc cagaagaaga tgccaaacgc attattaaag ttgtcgttga
    12901 cggtgactac gaagcaacca aagcaaccgt aacaggagtc gtaagaccgg attattaaaa
    12961 tagtcagggg agtgactatt ttaacgtgag ccttgaaata agagagcgaa caatgtctgg
    13021 gggagtgaaa cagtgcgggg aactgtttca gctggtcacc aagaaatatg aaagtgacca
    13081 tagaagaccc gagccaagaa atgcgaaagc gaggacagtc aggggagtga ctattttaac
    13141 gtgagttaga gcataaagag tgaggtgttt agaaaaacat taatctagag gagcttctgg
    13201 ccatcttcct cgttttattt aagtttacac aagcacatca gttatctggt gtgcttttta
    13261 gttgcaagcc ttttcaattt tttggcattc ttgatataat gactaaaaac gataaaagga
    13321 ttaagtatga atattgttat tataggtgcc tcctttgctg gtttaagcgc agctttggaa
    13381 tgtcgcaaat tgtatcagaa tgctcaaata acactaattg atagagaaaa agatgtggct
    13441 tactttccaa ataccttgaa ttggaaagtg gcaggaaaag tttctggttg ggaagaagcg
    13501 aagatttctt tgttcagcga ggtgcagcat gcagctattt cttgtctttt tgaaacagaa
    13561 tgtctcgcag tttatcccga aatgcgaaag gtaaagatac ggcatcatca agatataggt
    13621 gatattattt atgaccggct aatattggct atgggagcta gtcaaacatg ggaatgggga
    13681 acggaagaac ttcaagacta tctaattcgc tcaaaaacgc tatctcaagc acaagctagt
    13741 ctagagaaat tgacaaatgc aaaaacagtt gcagtgattg gagcaggaca gattggtttg
    13801 gaaagcttgg atgcccttag ccagttggat ttgaatttgc atgtgtttga ggcgcaagat
    13861 tcactccttg caaagtacgt tgatgaggat atgattgcgt cgattcgtca agagatggaa
    13921 aaaagaggaa tccaacttca tttatctgaa acagtcaatc agataacgat tgatactcag
    13981 gaagaacagc tggtttgtca tacagtcaca ggtaattatc cagctgattt agtcttgcca
    14041 tccaccaatt tgacgcccaa tattcagcta gtgaaagaca ggctaaaagt gactgcagaa
    14101 gggactgtat gggtggatga gtttcttgaa acaagtcaag agaatatttt tgctgtaggt
    14161 gatttggtca gtctcccagt agattatttt ggccaggcat atcttccgat gattcatcat
    14221 gcgattatga cagggaggat ggctgctcga aatttgcaaa agaggattgc tcctattaag
    14281 agagcccagc ggattgtttc tagtcatgta tttggctatt atataactag ccttggcttg
    14341 accgagagtg aggcgagctt gtggttggag agtaaatcga tccggattag aaggtcatat
    14401 agccagtggg aaccaacttt agtagatttc aagctgattg tcgaagaaac gagtgggcgc
    14461 atcatagggg gacaactcgt ttctactgca gattatattg aacagatgga tgtactgtct
    14521 ctagcgattt caaaggattt gaccgtcttt gacttggtag aacattcttg gctctgtctt
    14581 cctggaaata ctcctctggt ccccttcatc gtagaggccg ctcaagagta tattcggcaa
    14641 ttttatcagg ttgatgggga gggtgtctat gcggattgat tccttattgg aaaagcgtga
    14701 gcgcgccatt tatcagcttc tcctctactt agaagatagg aaagaggcgc catcgctaaa
    14761 ggatatttgc cactatttag aattgtcaaa atcaactctt cttcgctata ttgtatcttt
    14821 caatgaagaa gcagaagtaa ccgacttggg actctctttt caattcgaag atgaaaaggt
    14881 ttttttgaag aaaaaggcca gtttgagtct tcatcgtatc ttagcctatc tctgtcaaac
    14941 cagtaccaaa tatcaaatta ttgtttattt atctgataag gaagaggttt ctattcaaca
    15001 gctggctcaa gaattgctga taagcgaagc gactttgaat cgccatcttg cctctttgaa
    15061 ccagatattg gcagaatttg gtattggaat caaaagtggt cgtctaaaag gtagtgagct
    15121 tcaaatacgg tactttttac atcaaatgtt gagtttgact actacgagag cggaattaca
    15181 agaagagttt atgctaggga aaatagaggc tttattgccg gttttcgaac gcttctatca
    15241 atcgccgctc aatcctaagc aagcccatcg tctgttgttg tggctaatga tttcacagca
    15301 acgctctcga ttgcgacagc tagattttaa gcacctttac aaattgatgg aaccctatca
    15361 agaacataag ttttaccgac gtttgagaaa gatgtatttt acactaagtc agcaacaatc
    15421 cacctctttc caagaagggg agattatggc gttgtttgct ttcctgttta gccatttcat
    15481 tttagcgccg catcaattag agcaggttct tggtttcggt gggccgatta tggaagctac
    15541 ctctttggct cttcagaaat tacggttata ttttgaggga aatttaccag tctcagaaga
    15601 agcgctctat catctgaacc aaattatgag ccagctatat ttcttttatt cttcccttga
    15661 actggaagaa gtagaagctt ctagtttcta tccagaagca gaagacttgc taaaagacgt
    15721 ctataaatca gtttttcata gaaaagtcga taaagaaata aggaactctt atctgacaaa
    15781 tattgcggtt ttgtatattt attttagcca ggtccagcct atacaggtca aggttgcttt
    15841 tgcttcttcc ctacatgagg ttctatccta tcctctcttg ttgcaactaa gggagaagtt
    15901 agaaggcaat cgtcaggttc ttattgagcc ttatcaagca ggatatgact atgatttgat
    15961 cattacagat tacctcgaaa atacaagcat tccagtttat tgcctaggaa atcgattgaa
    16021 aatccaagac atcgtacaat taaaggcatg gatacaggat atatatcatc aaaagtcctg
    16081 tcaatcagag attatggcga ccaaaacttc ttttcctatc gagcatcgct agatgatgtc
    16141 agatagtctt tgtgaaaaat gtaagtgcat ttaaccttga aaaatttatt ttataaactc
    16201 tgataacagt tgatagaatc atctttctag ccactgctta tcagattttt ttattttttt
    16261 gaaaaaaatg ataggaaaaa ttcacaagaa tgggttagaa tagaattacc aagaaaacgg
    16321 aagcgttttc aaaaaagata aataaacagg agggagacct atgtctactg aaaaatacat
    16381 catggccatt gaccaaggaa ctactagttc acgtgccatt atcttcaata aaaaaggtga
    16441 aaaagttggc agttaccaaa aagagtttac gcaaattttc cctaaaccag gttgggttga
    16501 acataacgcc aatgaaattt ggaattctgt tcagtctgtg attgcagggt cctttatcga
    16561 aagcggtgtt cgtcctgatc agattgaagg aattggtatt accaaccagc gtgaaacaac
    16621 cgttgtctgg gataaggaaa caggtcttcc aatctacaat gccgttgtct ggcaatctcg
    16681 tcaaacagct catattgctg accagctgaa ggcggatggt catgcagata tgattcatca
    16741 aaagacaggt ctagtagtcg acgcctactt ctcagcaacc aaagttcgtt ggattttgga
    16801 ccaagttcct ggagcgcagg aacgtgctga aaaaggtgag attctcttcg gaaccattga
    16861 tacttggttg gtttggaaat tgactgatgg gaaatgccat gtgacggatt attcaaacgc
    16921 agctcgtacc atgctctaca acattgaaga gttgaaatgg gatgatgaaa ttttatctct
    16981 tctcaatatt ccaaaagcca tgttgccgga agttcgttca aactctgaag tttatggcac
    17041 aacagctcca ttccatttct atggcgcaga agtgccaatc tctggcatgg caggtgacca
    17101 acaggctgcc ctatttggac aattggcatt tgagccaggt atggtgaaaa atacttacgg
    17161 aactggttcc ttcatcgtga tgaatacagg tgaagagatg caattgtcac agaacaacct
    17221 tctcacaaca attggctatg gtatcggcgg caaagtctat tatgcgcttg aaggatctat
    17281 ctttatcgct ggttcggcgg ttcaatggct ccgtgacagc atgcgaatgg tgactacatc
    17341 acctgagtca gaagagcttg ctcgtaagtc taccagcaat gatgaagtct atgttgttcc
    17401 agcttttaca ggacttggtg ctccgtattg gaactcagat gcgcgtggct cagtctttgg
    17461 tctcactcgt ggtacgacta aagaagactt cgtcaaagca actcttcaat ccattgccta
    17521 ccaagttcgt gatgttattg ataccatgca attggataca ggtattgata tttctgtctt
    17581 gaaggttgac ggtggtgcag ctatgaacag cctcctcatg caattccaag cagatatttt
    17641 gggtattgaa atcgcacgcg ctcaaaacct tgaaactaca gctcttggag cagcattctt
    17701 agcaggttta gcagttggtt tctggaaaga tttggatgaa ttgaaagaac tcaacgctgt
    17761 cggccaatcc ttccaaccaa ccatgaacga agctcgtaaa gaacaacttt acaagggatg
    17821 gaaaaaagct gtcgcagcaa ctcaactatt tgcagaagta gatgaagagc aataaaggac
    17881 ttgttagcta ggggaaagaa gaatttcctc ttgctagaca gtcctattcg aaagttagga
    17941 agtgaatcgt atggaatttt caaaagaaac aagacgctta gctattgagc gaatgcagga
    18001 tcgtcaactt gacctcctca ttatcggtgg tggtattact ggtgctggtg tggctttgca
    18061 ggcagcagca agcggtatgg aaacagcctt gattgaaatg caagactttg cagaaggaac
    18121 atccagccgt tcaacaaaat tggttcacgg tggtcttcgc tacctcaaac aatttgacgt
    18181 ggaagtggta tccgataccg tatctgaacg tgctgtagta caaaatattg ccccacatat
    18241 tccaaagcca gacccgatgc tcttgccagt ctacgacgag ccaggttcaa ccttcagtct
    18301 tttccgtttg aaagtggcta tggacctcta tgatctcttg gctggtgtta acaatacgga
    18361 ccttgccaat aaggtcttga ctaaagaaga agtacttgaa cgtgaaccaa acttgaagca
    18421 agaaggtttg attggtggcg gtgtctatct tgatttccgt aacaatgatg cccgcttggt
    18481 tattgaaaat atcaaacgtg cagccaagga tggtgccttg attgccagcc gtgtcaaagc
    18541 tgagaaattc atcaaagatg aggttggaaa agttgtcggt atcattgctc gtgatttgct
    18601 gacagaccgc acctttgaaa tccgtgcgcg tttggtcatc aatacaacag gaccatggag
    18661 tgatgaagtg cgtaatctgg atggagaagg ttcaggcgtt ctccagatgc gtccgaccaa
    18721 gggtgtgcac ctagttgtcg atagctctcg cttgtctgta ccacagccga cttactttga
    18781 tactggctat gcggatggtc gaatggtctt tgtccttcca cgtgaaaata aaacttattt
    18841 tggtacgaca gatacagact atactggtga tttggcaaat ccaatggtaa cccaagaaga
    18901 tgttgactac ctgcttgata ttgtcaacaa tcgcttccca gaagcgaact tgaccttgga
    18961 tgacatcgag agcggttggg caggtcttcg tcccctcttg tctggaaatg gtgcttctga
    19021 ctacaatggt ggtaacaacg gaaaactcag tgatgacagc tttaatagct tgattgaaac
    19081 ggtaaaaggt tatttgaaca atgaaaagac acgtgacgat gtggaacatg atttgacaca
    19141 tttggaaggt agcgtttctg aaaaacactt ggatccttca gctgtatcac gtggctctgc
    19201 ccttgatcgt gatgacaatg gtttgctgac tcttgcaggt ggaaaaatca cagacttccg
    19261 taagatggca gaaggtgcat tggaaaaagt agcagacatc cttaaagaag aacatgggcg
    19321 tagcttcaaa ctcatcaatt ctaagaccta tccagtctct ggtggtgaat tgaaccctgc
    19381 aaacgtagca gaagaaatcg aacatctggc tcaactaggt gtgaagaaag gtcttgtcta
    19441 tgatgatgcg ctttacttgg caaacttgta cggctcaaat gcgacaaaag tctttgcatt
    19501 gaaccataaa gtagaagccg tttcaggctt gaacaagcgt gatttgcttt ccctacacta
    19561 tgctatgaag gaagagatga ccttgactgc agttgactat cttctccgtc gtaccaacta
    19621 catgctcttt atgcgtgagc agttggatgc agttgcgcct gaaatcatca aggaaatggc
    19681 agcttattat gcttggtcag aggaagaagt tgctcaacag gaacaattgt tggcagatac
    19741 acttgttaag aatgatttga cctatttgaa agaaaaatag aaagaggtgc atgatgacaa
    19801 atgaattaat cggtgaagta ctgggtactg ccttgctgat attacttggt aacggtgttg
    19861 tagcaggggt agtgctagat aagagtaagg ccaaggatgc tggttggatt gtaatcacaa
    19921 ttggttgggg tctagcagta gccatggcag cttttgtgag tggtttattg ggcccagccc
    19981 acctcaaccc agctgtatca attgcaatgg cttttgcagg aaatctccca tgggggtctg
    20041 tagtccctta tatccttgct caatttatcg gagcttttat cggtagtatc ctagtttacc
    20101 tcatgtacaa ggatcactat gatgcaacag aagacactgg tgctgtattg gcaactttct
    20161 ctactggacc tgccatccgg aacttagttt ctaatacaat tagcgaagca atcggaacct
    20221 ttgttttggt cttgggatta ttggcttttg gtcagtatga ttttccaaca gggcttggca
    20281 ctctaatcgt cggtggtttg attgtttccc tcggagtttc tcttggtggt ccaacaggat
    20341 atgccctaaa ccctgcgcgt gaccttggtc ctcgtatcat gcatgccatc cttccattga
    20401 agcacaaggg cgattcagat tggggctatg ctttggtacc agtagctggt ccaatcatcg
    20461 gaggtttgct tgcggctgtc ctatatggtc tcatttttta aaaaatatcc ttctctaatc
    20521 agcaatggtt agggaagttt tttattactt ggctgtcaat cgtgagcaga agattcttgt
    20581 ttatcaataa ttagtgataa aataaatcta tcaacatcag tgaggtcatc ttatgaacaa
    20641 tacaggtatt catcacattt caagtttggt aggaaacata caccaagcct atcattttta
    20701 tcatcatatt ctcggcttaa aattgacctt gaaaactgtc aatcaagaag attcaagcat
    20761 gtatcatctc tttttcggtg atgaagaggg ccgctttgga actgaattta ccatttttga
    20821 tatgcccaat catcctagtc atcgatcagg aaccaatcgt ttggaaagaa ctgtttttct
    20881 ggttaaagat tttgctgcct tggaattttg gcagaaaaga ctgacagagt ttgaagtgga
    20941 aaacgaagga attcaggctt ttggaaatgg gcatattctg aatttccaag atgaagatgg
    21001 acagctgctc ggtttaactt accatgaatc agtcggagaa atgtttccgt ataaaataga
    21061 tgaaattccg ttggaatacg ctattcttgg catcgccagt cttcacatgc gaatacgtga
    21121 agaaaaggag ttgttatctt tgctgacaga gacttttggt tttgtcgagg aaagtcgatt
    21181 tgtctttgag gataagatgg tgatttctct tctctttgac aacaccttcc aacatcgtct
    21241 atatttgata cttgaccaag agtcgccaat cagcgttatg ggagtcgggg ctattcatca
    21301 tatcgcattt agtgtcttag atgagtccga cttggaagac ctgattagtc gcttaaatct
    21361 catcaatcgt ccacattctg ggattatcaa tcgagatttc atgcattcct tgtacttccg
    21421 agcgccgaat taccttatgt ttgaggtggc aaccatgact ggtgaacgcg aatcgaaaat
    21481 gccagctcag aatgaagagt tggatcaggt agacctattt ttgccaagtt tctttgagga
    21541 ggacagacag gatatcgaaa aaaatctctc ccaacgttat taggagaaat gagatatgga
    21601 ttatcgcttt atcaaaggga ccagtccccg tcttttggtc tttttccacg gcacaggtgg
    21661 caacaaggaa tccacgctct ttctccgcca acagctggat ccaaaagctt ctgtcctttc
    21721 cttagatgga agttggggtc aaggcagaga aaggcgattc tttgcaccgc tgatcgacgg
    21781 tcagttggat cttgttgatt ttgaaatgcg cttgtcggct tttctggatt tttggcagga
    21841 cttggacatc cgagattatc gtcagattac tttcgtaggt ttttcaaacg gtgctaattt
    21901 catcatgggc ttgttgacca agcaagcaaa cctggcggac aattatatct tgctccaccg
    21961 ttcggcctta gactatactt ttcctatgga aaatagcaga gcagagattt tatttacact
    22021 ggggcagaat gaccaactcg tcgatccagt cgctcttgaa catcttgtag atgactggca
    22081 agcgtcagcc tttcccagag cctacctagt tcgttttgac aagggacatt ttttaagtca
    22141 ggatgaattg acctatatca aaaattggta tcaagaaaga atagacaaaa agacctgaac
    22201 aaataagttc aagtctttta tgtgtcttag attagtgttt ccaatttatc caccaatgaa
    22261 ccaacatagg cgatggtttc tttgagtggt tggtcagttg aaacgtcaac acctgcgtgc
    22321 ttagcaaggt cttgggcaga aagacttgca ccgagtgaca aggtttccaa ccatttttca
    22381 acaacttctt caggatgttc ttccaactgt ttagccatag ccgtaccgat ggtcaaccca
    22441 gctgagtagg tatatggata caacccaatg tagtagtgcg gttgacgcat ccagataaga
    22501 cctgcatcgt caccgatttc aaagtcttca ccccagaatt ccttgataac atccaacttg
    22561 atttggcaga gaatatcacc gttgaggtat tcttcgttgt ccaaacgagt gtagacttca
    22621 cgctggaagg ctgcttcaag caagtgagta accatgttgt ggaagtaagt acggctgatc
    22681 agttcgctaa tcaagtaagc ctggaagcca gggtcttggt tgtttttcaa aagggtgtta
    22741 catgtcaaga cttcatttgc agtagaaggc gcctcgatga agtagaggga tggatcgtag
    22801 ctgaggacgc tttgtttctt agccaattgg aaatgacctg catgtcccaa ttcgtgagcc
    22861 aataccaaga cctcgttcat caagcctgtc catgaaagta agatgtaaga tggtccatca
    22921 taaagtgtag cacagaagcc accagtagcc ttaccttcgt tttgagcaaa gtcaatccaa
    22981 cgctcatcaa atgattgttc aatcattttc acataatctt caccaagaat gcccaagcag
    23041 tcaatcaaga attgtttgga ttcttcaggt gtgatgcgtt ggttgtattc cgatggcaag
    23101 ctgattttca agtcagcatg agtgatttta tccaaaccat gagccttggc aaccaatttc
    23161 acatagcgac gcatgtgagg agccaattcc ttcatgatga catcaatctg acggtcgaag
    23221 agatcacgag agacattttg acgatgcaag aggaagtcaa tcgtattgtc aaatccacgc
    23281 aagcgagctt cgatttgctc attcttgata tgagacaaat aagtcgctgc ggttgtattc
    23341 ttgtattttt tcaaggttga atagaaacca gcagctgaat tacgacggat ttcggtatca
    23401 tggctgagct cataatcatt ttcaaagagc acatagctat tgccgagtgt ttgaccattt
    23461 gcctcgaagt tgtcaaaggt catatcctca aacttggtca caccgtagtt gttatagggc
    23521 tgaccaaatg ttggtgcaaa atttgataaa agttcttctt gaagtgggtg cagttgatgc
    23581 ggcttgtcac ggagaatagc atcaaagaat gcagcccatt gtggttgttc ttcttttaat
    23641 tcaagaagaa aggcttcatc taattgccca agttctgaat agaggcaatc tcgttgagga
    23701 cgtgccttgg cagaaacgag gtcgtattcg ttggccaggc tcgccaattc agtattcatc
    23761 ttatcgactt ccaaaggaag gaaggcatag tgggaaagtc tgctatcaag aataacgatt
    23821 ttttcgtatt ctgttaaggc ggaaacgatg gtatccttat cagttagctt ccctttgtaa
    23881 ttcgattcga aagctgtcac ttgcttagcg taggctgcca aattttcttt gtagttgtca
    23941 ggggtcggaa ataaaatgtc agtatcccag gttaattgca catcaatttc ttgacgttta
    24001 ggcattgcgt ttgtcatgat tttctcctta tttcatttta ataggtccat tatatcatac
    24061 taaagggctt tcagcgaaaa taagccaaag caaaatttat gaaaaagaaa tacttgacaa
    24121 aatgcataaa aacctagata atgtaagtat gaaagggttt actgaaaacc agaaaggagc
    24181 ttttatgcaa gtcattaaac gtagtggaga gattgttgaa tttgacccag ataaaatcta
    24241 ccaagccatc attaaagctg cacagacagt ttatgtcatt gatgaaactt ggcggaaaaa
    24301 tcttgctcag gtcacaaaga aagtagtgct tgacttggaa gaagctcata cagagcgacc
    24361 aacgattagc atggttcagt cgcaagttga acaccgtctt ttagatgcag ggtatatttc
    24421 tattgctgag cattacattt cctatcgctt gcaacgtgat ttggaacgta acggctatgg
    24481 cgataagatt attgtacatc tgcgttttga acaagtacgt taagagaaac ctagagaaat
    24541 ctaggttttt tgcttttata tatctttaca ttgtttaaag aaaatagcat tttaaaaact
    24601 ttttgaaaaa aatgtgatat tctgagcaaa aattttgtaa tcggtatcat ttttagtgta
    24661 taatagactt tgtaaaaaaa tatattttcg aaagtgagat ttcacattat ggctaaaatc
    24721 gttgttgtcg gtgctaacca tgctggtact gccgcaatca aaactatgtt gacaaattat
    24781 ggtcaagaaa acgaaatcgt tgtatttgac caaaactcaa atatttcatt cttgggttgt
    24841 ggtatggctt tgtggattgg tgagcaaatt ggcggtcctg aaggactttt ctactcaaac
    24901 aaagaagagt tggagagctt gggcgcgaca gtatacatgg agtcacctgt tacaaatatt
    24961 gactacgatg caaaaacagt tactgcactt gtaaatggtc aagaacatgt tgaatcattt
    25021 gaaaaacttc ttttcgcaac tggttcacaa cctatcttgc caccaatcaa aggagctgaa
    25081 atcaaagaag gttctcttga atttgaagca actcttgaaa acttgcaatt cgtaaaattg
    25141 taccaaaact cagctgatgt tattgaaaaa ttgaaaaaca aagacatcaa ccgcgtcgca
    25201 gttgttggtg ctggttatat cggtgttgag cttgcagaag cattccaacg taaaggtaaa
    25261 gaagttatcc ttatcgacgt tgtagataca tgtttggctg gttattatga ccgtgatttg
    25321 tcagatctta tggctaaaaa cctggaagag catggtattc aacttgcctt tggcgaaact
    25381 gttcaagaag ttgctggtga tggcaaagtt gagaaaatca tcactgacaa gaacgaatac
    25441 gatgttgaca tggttatctt ggctgttggt ttccgtccaa acactgcatt tgcaggtgaa
    25501 ggaatcgagc gtttccgtaa cggtgccttc cttgtaaaca aacgtcaaga aacttcaatc
    25561 ccaggtgttt acgctatcgg tgactgtgca actatttatg acaacgctac tggcgacaca
    25621 agctacatcg ctttggcttc aaatgcagta cgtactggta tcgtagcagc acacaacatc
    25681 tgtggtactg accttgaagg tatcggtgta caaggttcta acggtatctc tatctatggt
    25741 cttaaccttg tatcaacagg tttgacactt gaaaaagcta ctcgtcttgg tttgaacgct
    25801 gcggttactg aagtaactga caaccaaaaa ccagaattca tggagcatgg taacttccca
    25861 gttacaatca agattgttta cgataaagat tcacgtcgta tccttggtgc gcaaatggct
    25921 gctcgtgaag acatctcatt gggtatccac ctcttctcat tggcaatcca agaaggcgta
    25981 acaatcgaaa aattggcatt gacagacttg ttcttcttgc cacacttcaa caaaccttac
    26041 aactacatca cagtagctgc cttgggtgct gaataattaa ttgaatacaa aagctcagag
    26101 atgactctgg gcttttttag taaaaattga aattatattt aaaaatatca aaaaacttga
    26161 attgaatttt aaaaaatggt aaaattttag aaattcaaaa aaaaagaggt gtttttatgt
    26221 acaaaagact agaaattgtg agttattctg attttgataa ttatgaagcg gaatatcaaa
    26281 aacgctttga tagtctagct accataaaaa caggattgac aatcaatcct ttttcaaaga
    26341 gggaacaaag aaggttggca gataaacacc aattgttcta tgtattgctt ccgaaccatg
    26401 tcatggatat tgaaaagatt tataaaaata gccaacttct ttctaatttt gatttatcaa
    26461 gcgttcagat gcaaaagcta ttctatttgc aaattattga tgaaatccaa agtaccaatg
    26521 atatggaagg agtcaaatct actcgtaaag aaataaagga ggcatacaac tctctagata
    26581 aaaataaaag gttttctgga atcgtttcga tgtaccattc tattttgaaa aatgaatttg
    26641 agaaaataga ttctttgtct aaatttagga atatttatga tcaattattt ttagatgaga
    26701 tgtcagaaga tgaaaagcct gatggagagc tttttagaaa aaaagtgatt tatgtcggag
    26761 atggaaattc ctatgttcac caaggaaatt cctcggagtt ttcgattaat gaagatttaa
    26821 cgaagttaat catttttatg aacaatccgg agattcctct tattatcaaa tcaattatta
    26881 cgcactattt ttttgagtat gtacatccct tctatgatgg aaatggtaga atggggcgtt
    26941 tcctaatgtc atcctatctg tctagaaaat tagatttttt aacagggttg tctctgtcgg
    27001 agtctgtttt gcaaaataag agtaagtatg aggagggttt ctcaattact tctcacccta
    27061 aaaatagagg tgatttgacc ccgtttgtag ggaccatgct agaaatcatt ttaaatgcac
    27121 aagagaacat gaagactaag ttgggcaagt tgaagtcaca attagataga gtgtggatct
    27181 tgatagatgg tctagacctg acgggacctc aaaaagaatt gttgtttata ctttcccaag
    27241 ataagctttt tgatgttttg catactggcg tcagcaacaa ggaattaacg gaagcattcg
    27301 gcggaaaata caaaaggacg agaattgatt ctactctgaa aacactggaa ggaatgggct
    27361 tagtgacaaa agtgaaatca tccccagtca tttatgaagt tagttctaat ttgataaaag
    27421 atatttaata gcaccggcct cggctgggct tttttgcttg tcatccatca cattgccact
    27481 gcctatcgag agattttttg gtataatgga gagaatgatt ataacgaacc tgtattcaca
    27541 gtgtagtact tccatctaag cctagttttt cagctactca tcgttagttt tttcaaaata
    27601 tagtctttta gtttactttt agtactcgct ccaactatct ggtagatagt tggaggttgg
    27661 aaataaagcg aacaaagttc gcatcaacag ccgcaggcat aactcaatgc tttcttgttt
    27721 ctagacattg acttgaaaca gtcccccaga ctgtttc
//
LOCUS       DASFQS010000015        27390 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.015, whole genome shotgun sequence.
ACCESSION   DASFQS010000015 DASFQS010000000
VERSION     DASFQS010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 27390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27390
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.015"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(12..1604)
                     /locus_tag="U1041_000615"
     CDS             complement(12..1604)
                     /locus_tag="U1041_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767743.1"
                     /translation="MKKIIYQLRSVIAIQLVFHILYSLTNVVLPELNKYLFDHIFQMG
                     WTGLVWLLLAYALTIIANSVFQYISQVYEWKVSQGFYVTAKKGLANSLLSQPLVKFSE
                     KNVSAYLSIFDNDLETIEESYLSPLMDIIRSSLSMVIYAVSLFLFVHPLVAVGIILSS
                     ALAVFIPKWISGPLSQRQRAFLQSLESYFQVVTDLFSAKNRVNSETFDSISRVHHRSV
                     EESEQARFRFGKFKTLANVVNGFSMFLVQLTAFGLVGYLLLQKELTIGAAIATFSYVE
                     NFIYPMKYILLDVNYIHSTKETVTNLEGYLAGQVLSEQVPSYPNVTALEVRDVAYHVG
                     ELAVADFSYRFDKGKKYAIIGPSASGKSTFLRVLAGELALDKGSVSYLENDVLHEMEA
                     ATAFYLSQFEHLYHTDFENNVSVFGTYEKGRDVMLGLLRSLPTSLQDTLMTASNPSLL
                     SGGEKNVLCLLRALMSGKEILLLDEPTAHLDPALTKQVLINLLQLEDKLIITILHESD
                     SAILDMFDVVLEMRDGKLREKI"
     gene            complement(1639..3216)
                     /locus_tag="U1041_000616"
     CDS             complement(1639..3216)
                     /locus_tag="U1041_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767744.1"
                     /translation="MKKRNFWLTLSCIFAVALLNVGFLYQYRYIIDAIAAGDRQAFVS
                     YFVLMGLTVLVMLVFEYIRQIANVSYLNQVGFQLQATFIGKIFDLPFGRFVDQGAGAY
                     ISQLNNDLETVKEDYYDAFFTIFQGACTFGIASLALLSLDGLTAIFLILISFLPVVIP
                     YLFKKRRRLNQEAISDSQQVYNTRVSDVFLSYLQVKNSRQRQQVLDGLNDCYQAVNDK
                     VNQANRTTVTMRLLVGLVFYLTTLSIIFIGGFQVFSGALTIGGLTAILTISEQLVDPI
                     NSIAAAFLDRHAVKELKQEFELSNLGQEMKGQDLASAFQSIQLVKASYAIGEKQVFED
                     LTVAFERGKKYLILGESGSGKSSLALILTKNSQLQGGDIYFDQISLSDLSYQAIQDKI
                     AYLPQEGALFHDTVLYNLTMGQDVSEDRLMSLIKTMNLDSRFPSYASLSEEISDDSGL
                     SGGQKQRLLLIRALLQDKDILLLDESLSALDQETYAVIEAYLTSLADKTLIHISHRVS
                     DEVLSRYDGVVRIGESN"
     gene            complement(3320..4186)
                     /locus_tag="U1041_000617"
     CDS             complement(3320..4186)
                     /locus_tag="U1041_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4767745.1"
                     /translation="MNRFGRTLKLIREGKGKSLAEVAKGHISTSQLSRFENGESDITV
                     SKLFGVLAEMNVDVDEFVYASQDFKKDELTRILEQLKQSIYIRDVVTIKKILSEQLAK
                     AERDSRREFHRLNAILIAYKLSDLDKTVVVSKEDTAFLTDYLFQVDNWSYYELLLFAN
                     TMDELEHQTMMLFCRELVGRTQFYREMKLHRLAVSQILLSAYLVSVQHKELADAIFLE
                     KTIKGLFFDETEIFERILFKFGKAFYDYRKTGSANAILEMRKCIGLLRAVDSQNIADW
                     YETILEKIANEK"
     gene            complement(4325..6757)
                     /locus_tag="U1041_000618"
     CDS             complement(4325..6757)
                     /locus_tag="U1041_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEM4767746.1"
                     /translation="MKQINPKASKQFILVMIMTVLLAMGRALLLSGVSFPLWFVPLPL
                     LAYLIFTFYILVLLDKYEQFIKTKTFAKYVGYFLGFLYLVNLVYRLNAKKYQPWNIFR
                     NNLFQFELLLMLALPVLLAFLWRKKTGIREKLSQWSANHLVPDGYLLLTSLLSLSPLA
                     ISYWKDSHYESLVEKGSYIEFFSQTPLFAPIHFIGTYIFLRYLHKAFVEFKANRTNVH
                     SMLFISLALATLSHIGYQASMAGATGSYFTRHLFPGAIVFQIACLLFLNIIISLVINR
                     QILSVAVIAGLNVTLIAANFLKFRYRSEPLTPNDFKWVGNLGMILSFISLRVVLVSLV
                     FIVLLVFIYRRIHKKYFQGRIVASIWKRLAGVSVIVSLILGMGWAIRNEKDHKIVGWI
                     PILSQVNNWRNVDWKGYAFVARYRTLSFLWLQQLSKTSMEMPENYSEKTMKAIVKKYT
                     ALAEEINAERTGQLTDQTVIYILSESLADPRRIPGVTLSQNVLPNIEYIMSQTTSGLM
                     KSDHYGGGTANIEFQVYSGLPFYNYNSSISSVYLDVAPNMKKLPSISDLYPAENRVAI
                     HPYFDTSYNRNSIYKQLGIEQFYTLNSAKYPLTVTAEDYQGNFVSDKKTYDLILEQVR
                     SADTSFVSAITMQNHVQWNSAEPVGITASGEGFTAEENENLTSYVRLLSFTDQATRDF
                     LDQLKTLDKKVTVVFYGDHLPGLYPESAFVTDPSAQYKTDYFVWSNFDTAKYNYELVN
                     SSDMNALMLETTNNKVSPYYALLTEVLHKDRVGQAERDAKVAEELKLVQYDLSTGKGY
                     LLKYKDFFKVAT"
     gene            complement(6770..8500)
                     /locus_tag="U1041_000619"
     CDS             complement(6770..8500)
                     /locus_tag="U1041_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767747.1"
                     /translation="MLKTMLKKHPHLVALGLFVGFSLLLLVPHLLTKGMVTGADLIFH
                     YNRFYDAAMQMKEGNFSYIISLYGYQQSGRIVNALYGPYFAYLQGALVLFSGTWFRYQ
                     ILSNLLLGTLSATSLYLLMREVKVKYAHSILLSLFFVTTYSIQYWWATQGFTSWGVAL
                     FPLCLIPAVRFLQTKKVPIFLMAGAVGLMLQVHMLSTLFLVIAYGVLFLIGWWKSDQK
                     MKIIGQVALSVGIFLLLTINIWLPLVYINATNTLVPPFVNQKFVQNTVTWLKTAFLYY
                     PYPLPIFFGIYFYFLVKNWKKQSLVLAGLALTYAVFLILSTNLFPWQLVAGKGIDLVE
                     LIQFPFRFFLYANALLLGVVGLQVSGLSEKMQKIFSGLTVISLLVSVGFLWNQSYKEI
                     NGHYYSDTFLQKRIHTTLYGTTEEIRASFYSKDLGEFIHIAQKSTPDYVPDLSDSTGH
                     ITNEESDNTYFTYRDQVILPNQEFTKEVDGDQLVVTWTASEAEETAVPVIVYQDSQLV
                     LNDQVLDREDVELSAIGVPTVTSKKGQNTLVLSYKQQWWLLPVIFISLTGWLVWSMYY
                     IVIYRKSNLS"
     gene            complement(8702..9574)
                     /gene="rsmA"
                     /locus_tag="U1041_000620"
     CDS             complement(8702..9574)
                     /gene="rsmA"
                     /locus_tag="U1041_000620"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEM4767748.1"
                     /translation="MRIADKNVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEI
                     DQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLIPILADTLGRFDNVTVVNQDIL
                     KTDLQTQIQNFKNPDLPIKVVANLPYYITTPILMHLIESKIPFSEFVVMMQREVADRI
                     SAEPNTKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPLVSVKD
                     EDFFFRVSKASFVHRRKTLWNNLTNHFGKSDEVKDKLTQALGMAELEASVRGEALSMA
                     DFARLSDSLQEVGL"
     gene            complement(9752..10921)
                     /locus_tag="U1041_000621"
     CDS             complement(9752..10921)
                     /locus_tag="U1041_000621"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767749.1"
                     /translation="MTKELSERTANNEISRKNLEQFSLFISNTDKRTNNIFEISNPFE
                     TILPQLLDDKLTPTINQIITVQGNTLASAMNVKNQLNSVIFDDSTRKLYKPDFDNLSP
                     DVKNKLKSGIYKLGDSKKVEGNLRAVIVDTQNNNTRVEDLTLKEVDERKDNSSELATQ
                     LQLKQMYELLLDIQSTQEFQVIWDRNNSILSPFFESRMKVIEAQSETNNGKKVKLLEK
                     ASNLMEKSISHIKSDMISNKNEVLKKINQPHYFYTSFERHANFILEDMQLYTKIVGMQ
                     MYIDFTLDKQDLAKERFLAYKSSINELSEYNVPLNRGLMVNLLKHIPKIKDLEYIQKQ
                     EFASVLEIIHENYRTSGANTDFWLDIDEEVKKINNEKTLLENSNHTIFVEGENNE"
     gene            complement(10938..11321)
                     /locus_tag="U1041_000622"
     CDS             complement(10938..11321)
                     /locus_tag="U1041_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2513 domain-containing protein"
                     /protein_id="HEM4767750.1"
                     /translation="MKFNPEIARDILLDIEELHQYPESFVFSASEKFNRAKKYDIDMI
                     SYHCDKLAEAGYIKWAPQYSSDVLYIGFIDGLTYDGHQFLESVRSEKIWRETKARTKK
                     MGAVTINILSQIASNIISEMINGPK"
     gene            complement(11419..11748)
                     /locus_tag="U1041_000623"
     CDS             complement(11419..11748)
                     /locus_tag="U1041_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEM4767751.1"
                     /translation="MEFESYSVMLAPAVEKELADIYAYFSEQFSEEIAKRRIEMIVEA
                     LESLQIFPERGFNADNRFGKQIDPPHLTRGYLIGKDYIALYRVVENEVRVGHLFATKS
                     DYVKLLK"
     gene            complement(11738..12025)
                     /locus_tag="U1041_000624"
     CDS             complement(11738..12025)
                     /locus_tag="U1041_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin subunit"
                     /protein_id="HEM4767752.1"
                     /translation="MITIKKDAQVNFKTDSRLLEKAKEVFAMNQLDLTAGFNLFLQNI
                     AVKNELPILTEEELEREELFLQLQKEIQENQQAIEAGQGISLESVKEKYGI"
     gene            complement(12123..12491)
                     /locus_tag="U1041_000625"
     CDS             complement(12123..12491)
                     /locus_tag="U1041_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767753.1"
                     /translation="MDRVYAVKCLVKNEFEPSYENYSSYEEVTYLLPADVLVWEDEQV
                     DKNKLADYLRGLVEDGYVNADGTWKQSRLFHIAGVQEMDDRIEFDGAAVEVYRWFYNF
                     ERPVTEEEFLNLYYFDDLGR"
     gene            complement(12484..13074)
                     /gene="rnmV"
                     /locus_tag="U1041_000626"
     CDS             complement(12484..13074)
                     /gene="rnmV"
                     /locus_tag="U1041_000626"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HEM4767754.1"
                     /translation="MQGACSELTQKIKIQEVLVVEGKDDTANLKRFYEVDTYETRGSA
                     ISDDDLERIEKLHNLRGVIVFTDPDYNGERIRKIIMQAIPTVKHAFLQRDEAAPKSKT
                     KGRSLGIEHASFEDLEKALAGVRGYYDDEHNFDISKSDLMRLGLLMGGDSRRRREHLG
                     EQLRIGYCNGKQLLKRLELFGISLAEVEEAMGSYHG"
     gene            complement(13037..13819)
                     /locus_tag="U1041_000627"
     CDS             complement(13037..13819)
                     /locus_tag="U1041_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEM4767755.1"
                     /translation="MIQIFDTHTHLNVEQFDGRVQEELDFAKEMGVTLHNVVGFDRVT
                     IDKAMELADQHPEIYLTLGWHPTEAGTYDEEVESYLLEALKHPKVIALGEIGLDYYWM
                     TTDKATQARVFKRQMELAKELDLPFVVHTRDALEDTYQIIKEVGVGSRGGIMHSFSGT
                     LEEAQAFMDLGMHISFSGVVTFKKAVELQEAAQALPLEKILVETDAPYLAPVPKRGRE
                     NRTGYTRYVVEMLAQLRNQSVEEVAKATYENARSLFRIDSEN"
     gene            complement(13926..14063)
                     /gene="rpmH"
                     /locus_tag="U1041_000628"
     CDS             complement(13926..14063)
                     /gene="rpmH"
                     /locus_tag="U1041_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEM4767756.1"
                     /translation="MKRTFQPSKIRRARKHGFRSRMATKNGRRVLAARRRKGRKVLTV
                     A"
     gene            complement(14231..15226)
                     /locus_tag="U1041_000629"
     CDS             complement(14231..15226)
                     /locus_tag="U1041_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein jag"
                     /protein_id="HEM4767757.1"
                     /translation="MKFTGASVEEAIQNGLVELNIPRKKAHITVVAREKKGFLGFGRK
                     PAIVDIDVINETTVVKANQKAVRGVPDEINDLNEPVKSVSEATIDLGKVVAAVKEFEK
                     SGQTLDDDIKAQILKNEKEATTILEETGRIEILSEDLLTTTEATTSAKEDVNQEVVSE
                     NQADNFADLDIKIEPQYDIEQVVSEVTAYVQEILDDMDVEARIDTSHNRRTINIQVDT
                     NEPGRVIGYHGKVLKALQLLAQNFLYNRYERNFYITINVNDYVEHRAEVLQGYAQKLA
                     ERVLAEQEAYHTDPMSSSERKIIHRIISKMDGLTSYSEGSEPNRYVVVDIEGNHD"
     gene            complement(15246..16058)
                     /locus_tag="U1041_000630"
     CDS             complement(15246..16058)
                     /locus_tag="U1041_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM4767758.1"
                     /translation="MKKKVKWAGLLVASLIVLTACGTGPVTSQSTDAWDRLIYWFASI
                     IQFLSINGQIGIGIILFTILIRTLLLPLFQIQMNSSRKMQELQPQLKKLQAEYPGTDM
                     ESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQALTRVEALKVGHFLWLNL
                     GEPDPLFILPIMAAVFTFLSSWLTNKSAIEKNMAMTIMTYAMPVVIFFFAVAAASGVA
                     LYWTVSNAYQVAQTLVFNNPFKIIAERQAKIDAEKERQAKIRRAQKKAQKKK"
     gene            complement(16042..16401)
                     /gene="rnpA"
                     /locus_tag="U1041_000631"
     CDS             complement(16042..16401)
                     /gene="rnpA"
                     /locus_tag="U1041_000631"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEM4767759.1"
                     /translation="MKKSYRVKRERDFNDIFTKGNNVANRRFVVYQLPKEQKHFRVGL
                     SVSKKLGNAVMRNKIKRRIRHILIECQHQLVADDFVIIARKGVEELSYQEMKQNLIHV
                     LKLAKLYQEGVVIEKES"
     gene            complement(16472..17866)
                     /gene="argH"
                     /locus_tag="U1041_000632"
     CDS             complement(16472..17866)
                     /gene="argH"
                     /locus_tag="U1041_000632"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEM4767760.1"
                     /translation="MEAKKLWGGRFEASLEEWVEEFGASIRFDQKLAKYDIQGSLAHV
                     KMLGATGIINQEEAQVIQAGLEELLEEHEAGKLVFDIRNEDIHMNIESLLTDKIGSVA
                     GKLHTARSRNDQVATDMHLYLKDTLFQVISKLTNLQEVLLDVAEQHVETIMPGYTHLQ
                     HAQPISFAQHLLAYYNMFSRDSERFVFNMQHTDVSPLGAAALAGTTFPIDRQMTSDLM
                     GFAKPYSNSLDAVSDRDFILEFLSNASILMMHMSRLCEEIINWCSHEYQFVTLSDTFS
                     TGSSIMPQKKNPDMAELIRGKTGRVYGNLVGLLTVMKSLPLTYNKDLQEDKEGMFDSA
                     ETILVSIDILAGMLQSMTVHKERMAQSTEKDFSNATELADYLASKGLPFRQAHEIVGK
                     LVLECSKAGYYLQDVPLERYQELSPVIGPDIYTALESETAVSRRNSLGGTGFESIRQQ
                     IQQAKAQIIASKGL"
     gene            complement(17880..19073)
                     /locus_tag="U1041_000633"
     CDS             complement(17880..19073)
                     /locus_tag="U1041_000633"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000412328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEM4767761.1"
                     /translation="MTKEKLILAYSGGLDTSVAIAWLKKDYDVIAVCMDVGEGKDLEF
                     IHDKALSIGAIESHVLDVKEEFAQEYVLPALQAHAYYEQKYPLVSALSRPLISKKLVE
                     MAHKTGATTIAHGCTGKGNDQVRFEVAIAALDPTLKVVAPVREWKWAREEEIIFAKEN
                     GVPVPADLDSPYSVDQNLWGRANECGVLENPWNEAPEDAFGITTSPENAPDTPEYVDI
                     EFQAGVPVAVNGEKLSLANLIQKLNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAI
                     TLLTAHKEIEDLTLVREVSHFKPIVSNELSNLIYNGLWFNPATQALKAYLQATQSVVN
                     GTAKVKLYKGSAKVVARKSPNSLYDEDLATYTSADTFDQDAAVGFIKLWGLPTKVNAE
                     IHKKD"
     gene            19344..19844
                     /locus_tag="U1041_000634"
     CDS             19344..19844
                     /locus_tag="U1041_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEM4767762.1"
                     /translation="MEIWNAYTADGQLTDHTLTRGEPIPDGLYHLVVECIIRHHDGST
                     LFMKRDSTKPSYPDYYEATAGGSALFGEIAEQAILREVREETGIELTADQLRHHTHFV
                     AYDDQCIFHCYWAETDWDKSTIQLQAEETSNYIWVPQEKLKDFLGTELVIPRQKDYVE
                     RLFLES"
     gene            complement(19833..20123)
                     /locus_tag="U1041_000635"
     CDS             complement(19833..20123)
                     /locus_tag="U1041_000635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767763.1"
                     /translation="MIIVVKWLIVLYLGLLPLSAWVYRKQLPSWLLVLYACPVLISLL
                     EWQMVLGFILGLLLACGVRVIGGRILFGRNRLSHFLSHLLLSFILALALLAF"
     gene            20184..20546
                     /locus_tag="U1041_000636"
     CDS             20184..20546
                     /locus_tag="U1041_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4767764.1"
                     /translation="MKTGQVMQQFGIKRDTLRFYTEQGLLQPQLIDGNYYWNEAEINN
                     LENILGLRQLGLSVKAIIRIKELHDTKCGSLEQLKENKQVILDEIVDREKQILLLQEQ
                     KENLENLLQQIEEKLQNL"
     gene            complement(20583..21530)
                     /gene="mmuM"
                     /locus_tag="U1041_000637"
     CDS             complement(20583..21530)
                     /gene="mmuM"
                     /locus_tag="U1041_000637"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002351766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase"
                     /protein_id="HEM4767765.1"
                     /translation="MGRFKELLEQKEYIILHGALGTELEFRGHDVSGKLWSAKYLLED
                     PQLIKDIHKDYIRAGADLVTTSTYQATFEGLAEAGLSQAEAEELIRLTVDLTKEARDE
                     VWADLSETEKTSRTYPLISGDVGPYAAYLANGAEYTGEYGNISLSELKDFHRRRIELL
                     LEQGAELLALETIPNVLETQALVELLTDDFPNVEAYISFTSQDGQSISDGTSIEKIAE
                     LVNSSEQILALGLNCTAPSLYSAFLGKLREKTDKTFVTYPNSGEVYDGTTQIWKEQAD
                     HSHSLLDNTLVWHKLGAKVVGGCCRTRPADIADLVAGLK"
     gene            complement(21543..22919)
                     /locus_tag="U1041_000638"
     CDS             complement(21543..22919)
                     /locus_tag="U1041_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM4767766.1"
                     /translation="MENHNFENQGTFNREMNSRHLQMLSIGGVIGTGLFLSSGYTIAQ
                     AGPFGAVAAYLFGAIMVYLVMFSLGELSVAMPVTGSFHTYATKFISPGTGFMVAWMYW
                     LCWVVALASQFVGAAQLMQRWFPSVPIWIFATIFAVIVFGLNTLSVGWFAKAEDALSS
                     IKVYAIAAFIVLGTLAIFGILPFEGTNAAPLFTNITAQGLLPNGLVGLISVMLSVNYA
                     FSGVEMIGIAAGETDNPKKAVPQAIKSTIGLLVIFFVLTIVVLASLLPMSEAGVTEAP
                     FVLVLDKIGFPYAADIMNFIILTAILSASTSGLYASSRMLWSLANEGMISKELVKINK
                     HGVPMRGMILSMIGVVIALIASIYAEDTIFLALVSIAGFAVVIAWLAIPLAQIGFRRE
                     FLKNHSEDELEYKTPFSPTLPWITVVLLVISIIGIGWDPSQRAGLYFGVPFMIGCYIY
                     HYIRFKKW"
     gene            complement(23058..24512)
                     /locus_tag="U1041_000639"
     CDS             complement(23058..24512)
                     /locus_tag="U1041_000639"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEM4767767.1"
                     /translation="MTKPIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGTFLIRIE
                     DTDRKRHVEDGERSQLENLRWLGIDWDESPETHEQYRQSERLDIYQKYVDQLLASGKA
                     YKSYVTEEELAAERERQEAAGETPRYINEYLGMSEDEKAAYIAEREAAGIVPTVRLAV
                     NEAGIYKWNDMVKGEIEFEGGNIGGDWVIQKRDGYPTYNFAVVIDDHLMEISHVIRGD
                     DHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNTLQFIEDYRRKGYM
                     PEAVFNFIGLLGWNPGGEDEIFSREEFIQLFDENRLSKSPAAFDQKKMDWMSNEYIKN
                     ADLETVFNLAKPFLEEAGRLTDKAEKLVELYKPQMSSADEIVPLTDLFFSDFPELTEA
                     EKEVMAGETVPTVLNALKAKLEAMTDEDFQPDNIFPQIKAVQKETGIKGKNLFMPIRI
                     AVSGEMHGPELPNTIYLLGREKSIQHIDNMLKSL"
     gene            complement(24690..25970)
                     /locus_tag="U1041_000640"
     CDS             complement(24690..25970)
                     /locus_tag="U1041_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4767768.1"
                     /translation="MKKILKNATYLWVLTADMLSNFGDVVYYLALMNYVLLVPNSRLA
                     LAIVTFSEIFPSFMGLFTGYLADKTVNKISTIKLTLLFRVVLYVILGFCMGFEPALWI
                     VVVAATFNVFADFAGFYENGLYTPLGLRVAPKEEREQYSAFRQTVTSLLNIAFQALSA
                     LLVGLLSYQNLAFLNAGTFLASLLIMQLLTPVFRKLLTEQPLKIAEQPSQTEQKTKGP
                     GILASFKQAIVELRKIPEFRLVLITNPLINACGAILYPILVLLISEDPGLVFLNVETT
                     LALTILIFFVGNILGSTLVFSLFKKTSMVTLEVAATFSLLGVFIGMLLHQLPIIFFFL
                     TTMGISSGASGPKFNAKFVNSMPEEQLATIGGAVSTYFMLGQAFTRLLVSGLVLVLAV
                     NQISGFFLTATGILVLYVLYWLARNQKTPQNQSV"
     gene            complement(26056..26715)
                     /locus_tag="U1041_000641"
     CDS             complement(26056..26715)
                     /locus_tag="U1041_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767769.1"
                     /translation="MKKYGLGIALLVLAGLVLFRDSLGLHLALPFWTTVWFVLTFVTG
                     FHRLVKLDWLASIFCFGLAFIAVNSVYDWVKFGTWNMVLSLVLLCLGLKLIFKPRKRR
                     LAHGVVTGVIGDKGRDTAFGSSTHYIHDDNFLHDSVDVAFGSSTIYFDQAIILGDKAD
                     FHIDAAFSNITLYLPADWRAVVELDSAMSTTNNYATGMGEKMLHITGDMAFSNLTIYS
                     A"
     gene            complement(26720..27166)
                     /locus_tag="U1041_000642"
     CDS             complement(26720..27166)
                     /locus_tag="U1041_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator"
                     /protein_id="HEM4767770.1"
                     /translation="MKVRIEFDDNLDQVEVVIRAGQLGPEVEAIQRALQQVSRPSLVF
                     YKGSSEYFLSLSEVLFFETDGTKIFAHTGDDAYEVKMKLYELEEYLPIYFCRVAKSTI
                     VNSKAVYSLDKSFSGTSRIAFYKTHKEVHVSRHYYHLLKEKLQEMR"
BASE COUNT         8066 a         6332 c         5395 g         7597 t
ORIGIN      
        1 caacctcatt tttatatctt ctcacgcaat ttcccatcac gcatttccaa aaccacatca
       61 aacatgtcta ggatggcaga gtctgattca tgcaagatgg tgatgataag tttgtcctcc
      121 agctgcaaga ggttgatcaa aacctgcttg gtcagggcag ggtctaaatg ggcggtcggt
      181 tcatccaaga gcaatatctc cttaccactc atcaaggcac ggagcaggca caggacattt
      241 ttctcgcctc cacttaagag actaggatta cttgcggtca tcaatgtgtc ctgtaaactc
      301 gttggcaagc tccttaacaa gccaagcatg acatctcttc ccttctcata ggttccaaaa
      361 acagacacat tgttttcaaa atcggtatgg taaagatgct caaactggct gagatagaag
      421 gcggtagctg cttccatttc atgcaaaaca tcgttttcca gataggaaac acttcctttg
      481 tccagagcca gttctcctgc caacactcgt aaaaaagtgg attttccgct ggctgacgga
      541 ccaatgatgg catacttttt ccccttatca aaccgatagg aaaaatctgc taccgctaat
      601 tcccccacat gataggccac atctctcact tccaaggctg tcacattggg atagcttggc
      661 acttgctcag acaagacctg accagcaaga taaccttcta aattggtaac cgtttccttg
      721 gtcgaatgga tataattgac atccaagagg atatatttca tgggatagat gaaattttca
      781 acatagctaa aagtcgcaat ggcagcaccg atggtcaact ctttttgtag caagagatag
      841 ccgaccaagc caaaagctgt taattgtacc aaaaacatgg aaaatccatt gacgacattg
      901 gccagggttt tgaatttccc aaagcgaaaa cgagcctgtt cactttcttc tactgaccga
      961 tggtggacac gactgatgga gtcgaaggtt tcactattaa cgcggttctt agcagaaaag
     1021 aggtctgtca ccacctgaaa atagctttcc aaactctgta aaaatgcccg ctgacgctga
     1081 gaaagaggac ctgaaatcca tttgggaatg aaaactgcca aggcagacga cagaataatc
     1141 ccaactgcaa ccagcggatg aacaaagaga aagagggaaa ccgcatagat gaccatactc
     1201 aagctagagc ggataatgtc catgagagga ctcagataac tctcctcaat ggtttccaaa
     1261 tcgttgtcaa aaatggatag ataggcagag acattcttct ctgaaaattt gactaaaggc
     1321 tgtgataaca agctgtttgc cagacctttt ttagccgtga catagaaacc ctgagacacc
     1381 ttccactcat aaacctggga aatgtactga aagactgaat tggcaatgat ggtcaaagcg
     1441 taggccaaca agagccagac aagtcctgtc cagcccatct gaaaaatatg gtcaaaaaga
     1501 tacttattta actcaggtaa tacgacattg gtcaaactat ataagatatg gaaaaccaac
     1561 tgaatggcaa taacagacct caattgatag atgatttttt tcataactcc tcctagaata
     1621 ggaacaatct gacaaaaatt aattgctctc cccaatccgt accaccccat cataacggct
     1681 aaggacctca tcggacacgc ggtgggaaat atggatgagc gtcttatcag ctagagaggt
     1741 aaggtaggct tcaatcactg cataggtttc ctgatccaag gcagacagac tttcatccag
     1801 caacaagata tccttatctt gcagcaaggc acggatcaag agcaggcgtt gcttttgtcc
     1861 gccagacagt ccgctatcat cactaatttc ctcgctcaaa gaagcataac ttgggaaacg
     1921 actgtcaagg ttcatggtct taatgagtga catcagccta tcttctgaaa catcctgtcc
     1981 catggtcaag ttgtaaagaa ccgtatcatg aaaaagggct ccctcttgtg gcagataggc
     2041 aatcttgtct tgaatggctt ggtaggataa gtctgaaaga gagatctgat caaagtaaat
     2101 atcccctcct tgcagttggc tattcttggt caaaataaga gccaaggaag atttgccaga
     2161 accactttcc ccaagaatta aatacttctt gccacgttca aacgctacgg tcaggtcttc
     2221 aaagacctgc ttctcaccga tagcataact agccttgacc agttgaatac tctggaaagc
     2281 tgaggccaga tcctgtccct tcatttcttg acccagatta gatagctcaa actcttgctt
     2341 caattcctta acggcatgcc tgtccaaaaa ggctgccgca atgctattaa tgggatccac
     2401 caactgctct gaaatggtca gaatagctgt caagccaccg atggtcaagg cgccagagaa
     2461 gacctgaaaa ccaccgataa agataatcga aagagtggtc agataaaaga ccaaaccgac
     2521 taagagccgc atggttactg tcgttcgatt ggcctgattg accttgtcat tgactgcttg
     2581 atagcaatcg ttcagaccat ctaaaacttg ctgtctttgg cggctatttt tcacttgcaa
     2641 ataactcaga aagacatctg aaacccttgt attatagacc tgctgactgt ctgaaatcgc
     2701 ttcttgattg agcctcctcc gctttttaaa caaataggga atcacaactg gcaagaatga
     2761 gatcagaatc aagaaaatag ctgtcagacc atccaagcta agcaaggcta gactggcaat
     2821 gccaaaggta caagcacctt gaaaaatcgt aaagaaagca tcgtaataat cttctttcac
     2881 cgtctccaaa tcattattga gctgagaaat ataggcccct gccccctggt caacaaaccg
     2941 cccaaaaggt aaatcaaaaa ttttcccaat aaaggtcgcc tgcaattgga aacctacttg
     3001 attgagatag ctgacattgg caatctgacg aatgtattca aagaccagca tgacaaggac
     3061 agttaacccc atcagcacaa aataggacac aaaggcctgt ctatctccag ctgcaatagc
     3121 atcaataata tagcgatatt ggtacagaaa gccaacattg agcagggcta ctgcaaaaat
     3181 acaagataag gttagccaaa aattcctctt tttcatttct tctccaccgt ttgatagatt
     3241 tctaagcaaa catttggtcg ctttcatcta tattatagaa taggaattgg agacgatttt
     3301 attcgtcccc tatatgcaac tatttctcgt tcgctatttt ttcaagtatc gtttcatacc
     3361 aatctgctat attctggcta tcgaccgctc gtaaaagtcc gatacacttt ctcatctcca
     3421 aaatagcatt ggcacttcct gtttttcgat aatcataaaa agccttacca aatttaaata
     3481 aaatccgttc aaaaatttcc gtttcatcga aaaacagacc tttgatggtc ttttcaagaa
     3541 agattgcgtc ggcaagttcc ttatgttgaa cgctgacgag ataggcacta agtaaaattt
     3601 gagaaactgc caatcgatgt agtttcattt cacgataaaa ctgtgtacga ccaactagtt
     3661 ccctgcaaaa aagcatcata gtctggtgtt ctaattcatc catggtattg gcaaatagca
     3721 agagctcgta ataactccag ttgtccactt gaaataagta atccgttaaa aaggctgtat
     3781 cttctttcga aacaactact gtcttatcta agtcgctcag tttatacgcg attaaaatag
     3841 cattcaaccg atgaaactcc ctacgagaat ctctttctgc ttttgctaat tgttcagaca
     3901 agattttctt tatggttaca acatctctga tatagatgga ttgttttagt tgttccaaaa
     3961 ttctagtcag ctcatctttt ttgaaatcct gactggcata cacgaactcg tccacatcca
     4021 cattcatttc tgccagcaca ccaaataatt tactaacagt aatgtcggat tccccatttt
     4081 caaaccgaga aagttgagaa gtagaaatat gtcccttggc gacctccgcc aaactcttcc
     4141 cctttccctc tcttatcaat tttaatgtcc taccaaaacg attcatgctt tacctctaca
     4201 ctcacgatta aaaaatcatt tgtaaacata attattatac cacaacttcc tatgtttgtg
     4261 tactttttca cataaagaat aaaccaagcc agctatctga cttggtttat ttttattctg
     4321 ttgtttatgt tgccaccttg aaaaagtcct tgtatttcaa aaggtagcct tttcctgtag
     4381 ataggtcata ttggaccagt ttgagttctt ctgcaacttt cgcatcccgc tcagcctgtc
     4441 ctactcggtc cttatgaagc acttccgtca agagggcata gtaaggactg accttgttat
     4501 tggtcgtctc cagcatcagt gcattcatgt cgctagagtt aactagctca taattgtatt
     4561 tcgctgtatc aaaattactc cacacgaaat aatctgtctt gtactgcgca cttgggtccg
     4621 tcacgaaggc agactctgga tacaaacctg gtaggtggtc accataaaaa acaacggtca
     4681 ctttcttatc caaggtctta agctggtcta gaaaatccct tgttgcctga tccgtaaagg
     4741 ataggaggcg aacatagctg gtcaagtttt cattttcctc agccgtgaag ccctcacccg
     4801 atgctgttat acctacaggc tcagcagagt tccactgcac atggttctgc atggtaatag
     4861 ccgacacaaa gctggtatca gcagaacgta cctgctccaa aatcaagtca taggtcttct
     4921 tgtcactgac aaaattcccc tgataatcct cagccgtcac agtaagagga tacttggcac
     4981 tattgagagt gtaaaattgc tcaatcccca gctgcttata gatagaatta cggttgtagc
     5041 tagtatcgaa gtaggggtga atagcgacac gattctctgc tggatagagg tcactgatac
     5101 ttggcaactt cttcatattt ggcgccacat ccagatagac ggacgaaata gaagaattat
     5161 aattgtaaaa tggcaaacca ctataaacct gaaactcgat attagccgta ccaccaccat
     5221 agtggtcact cttcatcaag ccactggtag tctgactcat gatgtactca atatttggaa
     5281 ggacattctg gctaagggtc acacccggaa tccgacgcgg gtcagccaaa ctctcgctaa
     5341 gaatatagat aactgtctgg tcagtcagtt gacctgtccg ttctgcattg atttcctcag
     5401 ccaaggcggt gtacttcttc acaatagcct tcatggtctt ctcagagtaa ttctcaggca
     5461 tttccatact ggtcttactg agttgctgca accagaggaa tgaaagagtg cgataacgag
     5521 ccacaaaagc atagcccttc cagtctacgt tccgccagtt attgacctga gaaagaatag
     5581 gaatccagcc aacaatcttg tggtcttttt cattgcgaat tgcccagccc attcctaaaa
     5641 tcaaggatac gataactgaa actcctgcca gccgtttcca gatagaagcg acaatccttc
     5701 cttggaagta cttcttatga atacgtcggt agataaacac aaggaggact ataaagacga
     5761 gcgataccaa gacaacacgt agactgataa agctgagaat catccccaag ttcccgaccc
     5821 atttgaaatc attgggggtc aatggctccg aacggtagcg gaatttgagg aaattagccg
     5881 ctatcaaggt cacatttaga ccagcaatga cagcaaccga caagatttga cggttgatga
     5941 ccaagctaat gataatattt aggaataaga ggcaggcaat ctgaaagaca atggctccag
     6001 gaaagagatg gcgtgtgaaa taagaaccag tcgctccagc catagaggcc tgataaccaa
     6061 tatgcgacag ggtagccaga gccaagctga taaagagcat actgtggaca ttggtccgat
     6121 tggccttaaa ctctacaaat gccttatgaa gatagcgaag aaaaatgtag gtccctataa
     6181 aatgaattgg tgcaaacagc ggtgtctggc tgaaaaactc tatgtaagag cctttctcaa
     6241 ccaaactctc ataatggcta tctttccaat atgagatagc tagagggctg agagaaagta
     6301 agctggtcaa gagcaaatag ccgtctggta ccaaatgatt ggctgaccac tggcttaatt
     6361 tttctcgaat ccctgtcttc ttccgccata aaaatgccaa caatacggga agagccaaca
     6421 tcaatagaag ctcaaattga aagagattat tacggaaaat attccagggt tgatacttct
     6481 tggcattgag ccgatagact agattgacaa gatacagaaa gcctagaaaa tagccgacat
     6541 acttggcaaa ggttttggtc ttgataaact gttcgtactt atccagcagg accaagatat
     6601 aaaaagtaaa aataagatag gcaagtaagg gcagggggac aaaccagagc ggaaaagata
     6661 ctccacttag caacagagcc cgacccatcg ccagcaaaac ggtcataatc atgactagaa
     6721 taaattgctt gcttgccttg ggattgattt gtttcataac atttctctct taggaaagat
     6781 ttgattttcg gtaaataacg atgtagtaca tcgaccagac tagccatcca gtcaaactga
     6841 taaagataac tggcaataac caccactgtt gcttgtagga taggacaagg gtattctgcc
     6901 cttttttgct ggtaaccgtt ggtacaccaa tagcggaaag ctccacatct tctctatcca
     6961 agacctggtc attcaaaaca agctgactgt cttggtaaac aataactggt accgcagttt
     7021 cttctgcttc tgatgccgtc caagtcacca ccagctgatc gccgtcaact tctttagtaa
     7081 actcttgatt tggtaaaatc acttggtcac gataggtaaa gtaggtatta tccgactctt
     7141 cattggtgat gtgacctgtg ctatctgaca agtctggtac gtagtctggc gttgatttct
     7201 gagcaatgtg gataaattcg cccaagtctt tagaatagaa agaagcccgt atctcttccg
     7261 ttgtaccgta cagagtcgta tgaatgcgtt tttgcaggaa ggtatcgcta tagtaatgcc
     7321 cattgatttc cttataactc tgattccaga ggaaaccaac cgaaacaagc aaagaaataa
     7381 cagtcaaacc agagaaaatt ttctgcattt tttctgacaa gccagatact tgtagcccta
     7441 ccactcctaa taacaaggca ttggcataga ggaagaaacg gaaaggaaat tggatcaatt
     7501 caactaagtc aatccccttg ccagctacta attgccaagg gaagaggttg gttgacaaaa
     7561 ttaaaaatac tgcgtaggtc aaagcaagac cagccagaac cagcgattgt ttcttccaat
     7621 ttttcaccaa gaaatagaaa taaattccaa agaaaattgg caatggatat ggatagtaga
     7681 gaaaggcggt ttttagccat gtgacagtat tttgaacaaa tttctggtta acaaatggtg
     7741 gcaccaaagt gttggttgcg ttgatataaa ccagtggcaa ccagatattg atagtcagga
     7801 gcagaaaaat ccctaccgac agggctactt gcccaataat cttcattttt tggtctgatt
     7861 tccaccaacc aataaggaag agtacaccat aggcaatgac caagaacaag gtcgatagca
     7921 tatgaacctg caacatgagc cctaccgctc ctgccatgag gaatatcggt acttttttag
     7981 tctgtaagaa acgaaccgca ggaatcaaac aaagcggaaa gagagccact ccccagctgg
     8041 taaatccttg ggtcgcccac caatactgaa tggagtaggt cgtcacaaag aagagggaca
     8101 agaggataga atgagcatat ttgaccttga cctcgcgcat gagcaggtag agggaggtgg
     8161 cactcagagt acccaagaga agattggata aaatctgata gcggaaccag gtcccactaa
     8221 aaagaactag cgccccctgt agataggcaa aataaggtcc atagagagca ttgacaatcc
     8281 gtcctgactg ctgatagcca tacaaactga taatatagga gaaattgccc tccttcatct
     8341 gcatagccgc atcatagaaa cgattgtagt ggaaaatcaa gtccgcacct gtcaccatcc
     8401 ccttagtcag caagtgggga accaataata ataaagaaaa gcccacaaat aggcctaggg
     8461 ctactaaatg gggatgcttt ttcagcatag ttttcaacat atagatacct tcataaaaaa
     8521 agagggaaac cctctcttgt ttttgtaaat attctgccaa tttgcagaca atatttttca
     8581 aaagttagtc acatttcagt atagcaagct ttccacccac tgtcaacgaa caaggtaaat
     8641 aggaaaacga ttttagataa aataaatatt gattgcagat tcctccgcaa tcaatactta
     8701 cttataaacc aacttcctgg aggctatcag acagacgtgc gaagtcagcc atggaaaggg
     8761 cttctccacg gacactggct tccagctctg ccatgccaag tgcctgcgtc agcttgtcct
     8821 tgacctcgtc ggacttaccg aaatggttgg tcaggttgtt ccacaaggtc ttgcgtcggt
     8881 gaacaaagct ggccttggac actcggaaga agaaatcttc gtccttgacg ctcaccagag
     8941 gttgctcgcg gcggaccatt ttgagaatgg cggagtccac gtttggtgcg ggtacaaaga
     9001 cggtgcgagg cacgatgaaa gccaccttgg cagtcatgta gtactggacc gcgatggaca
     9061 ggctaccgta agccttggtg tttggctcgg cagaaatgcg gtcggccacc tcccgctgca
     9121 tcatgaccac gaactcgctg aagggaatct tgctctcaat caggtgcatg aggatagggg
     9181 tggtgatgta gtagggcagg ttggccacaa ccttgatggg caggtcagga ttcttgaagt
     9241 tctgaatctg ggtctgcagg tcggtcttga ggatgtcttg gttgaccacg gtcacattgt
     9301 caaagcgacc cagggtgtcc gccaaaatcg gaatcaggcg gtcatcaatc tcaaaggcca
     9361 tgacttcggc ggcattttcc gccaaaaact cggtcaaagc tccgattcca ggaccaatct
     9421 caataacatt gacattctgg tcaatctctg ccgtgtccac aatcttctgt aaaatattag
     9481 tatcggtcaa aaagttctga ccgaaggatt tcttaaaggt aaacccgtgg cgttcaagga
     9541 cggcacgagt aacgtttttg tctgcgattc tcatgtttgt tctttctgtt atctatcttt
     9601 actaattttc tttttcgcaa ggaaaactag ccctactact gttcctagta ttcccatcca
     9661 atccttactt ctcattctac aacttttaca aataggagct agatgattta ctgtcagagt
     9721 cttcttgcaa aatatgcatg tcttgttatc cttattcatt attttcccct tcaacaaata
     9781 tagtatgatt gctattttca agcaaagttt tctcgttatt tattttttta acttcttcat
     9841 ctatatctaa ccaaaaatct gtatttgcac cagaggtacg atagttctca tgaatgattt
     9901 caaggacact tgcaaattct tgtttttgaa tatactccaa atctttaatt tttggtatat
     9961 gttttagtag atttaccatc aaacctctat ttagaggcac attatattcc gacaattcat
    10021 taattgaact tttataagct aaaaatcttt ctttagcaag gtcttgttta tctaatgtaa
    10081 aatcaatata catttgcata cctacaattt tagtgtataa ctgcatatcc tctaatataa
    10141 aattagcgtg tctctcaaat gatgtataaa aataatgtgg ttgatttatc ttttttagaa
    10201 cttcattttt attagaaatc atgtcagatt taatatgact aattgacttc tccatcaagt
    10261 tagaagcttt ttcaagtaac ttaaccttct ttccattatt tgtctcgctc tgagcctcaa
    10321 ttactttcat cctagattca aagaatggac taagaatact attattccta tcccatatca
    10381 cttgaaattc ctgtgtgctt tggatatcca acaataactc atacatttgt ttcaattgca
    10441 gttgtgtcgc aagctccgat gaattgtctt ttctttcatc aacttctttt aatgttaaat
    10501 cttcaactct agtattgtta ttttgcgtat ctacaattac cgctcgtaag tttccctcaa
    10561 cttttttaga atcacctaac ttatatatcc ctgatttcaa tttatttttt acatctggcg
    10621 ataaattatc aaaatcaggc ttgtaaagtt tcctagtaga gtcatcaaat attactgaat
    10681 taagctgatt ttttacattc atggcactcg ccaaagtatt tccttggaca gttataattt
    10741 ggtttatggt tggggttaat ttatcatcta acaattgagg taaaatcgtc tcaaaaggat
    10801 tactaatttc aaaaatatta ttagttcttt tatcagtatt agaaataaat aaagaaaact
    10861 gttctaaatt ttttctacta atctcattgt ttgcagttct ttctgatagt tcttttgtca
    10921 tgcatcacct gtataattta ctttggtcca tttatcatct ctgaaataat gtttgaagca
    10981 atctgcgaca atatatttat tgtaactgct cccatttttt tagtacgagc ctttgtttct
    11041 cgccagattt tttcactcct aacgctttcc aaaaattgat gtccatcata tgttagacca
    11101 tcaataaagc ctatatataa tacatcactt gaatattgtg gtgcccattt aatataacct
    11161 gcttcagcaa gcttatcgca atgatatgaa atcatatcaa tatcgtattt ttttgctcgg
    11221 ttaaactttt ctgatgcgga aaatacaaac gattctgggt attggtgtaa ttcctctata
    11281 tctaacaaaa tatctctagc aatctctgga ttaaatttca tcttctttat cctcctaata
    11341 aagtaactat taatgagggc aatatttagt tccccagctt ccaaaacatt caagaaactc
    11401 actatttatc aaacgcaatc acttcaacaa cttcacataa tcactcttag tcgcaaaaag
    11461 gtgaccaact cgcacttcat tttctaccac acgatagagg gcgatgtagt cttttccaat
    11521 aaggtagcct cgggttagat gtggcgggtc tatctgctta ccaaaacggt tatcggcgtt
    11581 aaagccacgt tcaggaaaaa tttgcaaact ctccaatgct tcgacaatca tctcaattcg
    11641 tcttttggca atttcttctg agaactgttc cgaaaaatag gcgtaaatat ctgccaattc
    11701 cttctccact gctggagcaa gcatcactga ataagactca aattccatac ttctctttga
    11761 cactttctag gctgatccct tgacccgcct caatcgcctg ctgattttcc tgaatttcct
    11821 tctgtaactg taaaaacaac tcttctcttt ccaactcttc ttcagtcaga atgggcaact
    11881 cattttttac agcgatattt tgcaagaaga ggttaaaacc agcagtcaaa tccaactggt
    11941 tcatagcaaa tacttccttg gctttttcca aaagtctgga gtcagttttg aaatttactt
    12001 gggcatcttt ttttatagtt atcaatctag tccacctcct agttttctat attgtaacat
    12061 gaatatatct cagtagcaat cttcaaaaaa gcagaaatag taacatttcc actctagatt
    12121 gtttatctcc ccaaatcatc aaaataatag agattcaaaa attcttcctc agtaactgga
    12181 cgttcaaaat tgtaaaacca gcgatagact tccacggctg ctccatcaaa ctctatcctg
    12241 tcgtccattt cttgcacacc ggcaatatga aacaaacggc tctgcttcca agtaccatcc
    12301 gcattgacat agccatcttc aactaaacca cgcaaatagt ctgctagttt gttcttatca
    12361 acctgctcat cctcccaaac aaggacatca gccggcagca agtaggtcac ttcttcataa
    12421 gatgaataat tttcataaga aggttcaaac tcgtttttaa ccaagcactt aacagcgtag
    12481 accctatcca tgatagctcc ccatagcctc ctcaacttct gccaaactta tcccaaacag
    12541 ttccaagcgt ttgaggagtt gcttgccgtt gcagtagccg atgcggagct gttctcccag
    12601 atgctccctc cgcctgcggc tgtcgccacc cataaggagt cctaggcgca tcaggtctga
    12661 cttgctgata tcaaagttat gttcatcatc atagtagcca cgcacgcctg ctagggcctt
    12721 ttccaagtcc tcaaagctgg cgtgctcaat gcccaaggac cgcccttttg tcttggactt
    12781 gggggcagcc tcgtcccgct gtaaaaaagc gtgtttgacc gtgggaatgg cctgcataat
    12841 gatctttcga atccgctccc cattgtagtc tgggtcagta aagacaatga cgccccgcag
    12901 gttatggagt ttctcgatgc gttccaagtc atcgtctgat atggcagaac ctctggtttc
    12961 gtaggtatcc acctcgtaaa accgtttcaa gtttgccgtg tcgtccttgc cctcgacaac
    13021 gaggacttct tgtatcttaa ttttctgagt caattctgaa caagctcctt gcattctcgt
    13081 aggtcgcttt cgccacttct tcgaccgact ggttgcgaag ctgggccagc atttccacta
    13141 catatctggt gtagccggtg cgattttccc gaccacgctt gggaacaggc gctaagtagg
    13201 gtgcgtccgt ctcgaccagg attttttcta ggggcaatgc ttgcgccgct tcctgaagtt
    13261 cgacagcttt cttgaaggtc accactcccg agaaggagat gtgcatgccc aggtccatga
    13321 aggcctgagc ctcctccagc gtgccagaaa aggaatgcat gataccacca cgcgagccga
    13381 cgccaacttc cttgatgatc tgataggtat cttccaaagc atcgcgagta tgaaccacaa
    13441 agggcaaatc caactctttg gccagctcca tttgccgctt gaagacacga gcctgggttg
    13501 ccttgtcagt agtcatccag tagtaatcca gtccaatctc tcccagggca atgaccttgg
    13561 gatgtttgag tgcctcaagc aagtagcttt ctacttcctc gtcataggtg ccagcctccg
    13621 tcggatgcca acccaatgtc agatagattt caggatgctg atcagcaagc tccatagcct
    13681 tgtcaatggt gactcggtca aaaccgacaa cgttgtggag agtgactccc atctccttgg
    13741 caaaatctaa ttcttcttgg acccgaccgt caaactgctc gacgttgagg tgggtatgtg
    13801 tatcaaaaat ttgtatcatc gttccatcac tttctttcct actattgtaa catatttcag
    13861 aagattctta tgagaagaaa aaaaccagca gactcgagtt tctgctggct tctcttttca
    13921 tcttcttatg ctactgtaag aactttacgt cccttacggc gacgagcagc taacacgcga
    13981 cggccgtttt tagttgccat acggctacgg aaaccgtgtt tacgcgcgcg acggatttta
    14041 cttggttgaa aagtacgttt cacgatgaat acctcctctt agattcttgt attcgtttag
    14101 ccggctagtt ttgatcagtt actaaacata ccaaactatt ttatataaat tctgttcgtt
    14161 tgtcaagcta ttctgccata cttttaggaa agaatcagaa aatcattgaa aaaagaggac
    14221 tagcctcttt ttaatcatga ttcccttcaa tatctacaac gacatatcgg tttggctcgc
    14281 taccttctga ataacttgtc aagccatcca ttttagagat aatgcggtgg ataattttac
    14341 gctcactact tgacatcgga tctgtatggt aggcttcctg ctctgccaaa acacgttctg
    14401 ccaatttttg tgcgtagcct tgaagcactt cagcacggtg ttctacatag tcattcacat
    14461 tgatagtaat gtagaagtta cgctcatagc gattatatag gaagttctga gccaacaatt
    14521 gcaaggcttt caaaactttt ccgtgataac cgataacacg acctggttca ttggtatcca
    14581 cttgaatatt gattgtacgg cgattatgac ttgtatcaat acgcgcctca acatccatat
    14641 catccagaat ttcttgtaca taagctgtca cttctgaaac aacttgttca atatcatact
    14701 ggggctcaat cttaatatct aaatcagcaa aattatctgc ttgattttct gagacgactt
    14761 cttgatttac gtcttcctta gcagatgttg ttgcctctgt agtagttagt aaatcctctg
    14821 aaagaatttc aatccgacct gtttcttcca aaatcgttgt cgcttctttt tcatttttca
    14881 agatctgcgc tttaatatca tcatcaagcg tttgaccaga cttttcaaat tctttcaccg
    14941 ctgcaacaac ttttcctagg tcaatcgtag cttctgaaac actttttact ggttcattga
    15001 ggtcattgat ttcatctgga acgccacgaa ctgctttctg attagcctta acaaccgttg
    15061 tttcattgat aacatcaata tccacaatcg ctggctttct accgaaacca aggaaacctt
    15121 ttttctcacg cgcaaccaca gtaatatgtg ctttttttcg aggaatattt agctctacca
    15181 agccattttg gatggcctct tcaacacttg ctcctgtaaa tttcatcttc tctctcctag
    15241 ttttcctatt tctttttctg tgcttttttc tgtgcccgtc ggatttttgc ctgacgctct
    15301 ttttccgcat caattttcgc ttgacgctct gctattattt taaaaggatt attgaacacc
    15361 aaggtttgag caacctgata ggcatttgac actgtccaat acaaagccac cccactagca
    15421 gctgccacag caaagaaaaa aatcaccacg ggcatggcat aggtcataat tgtcatagcc
    15481 atattcttct caattgctga tttattggtc aaccatgagc tgaggaatgt aaacactgca
    15541 gccataatcg gcaaaataaa gagcggatcc ggctccccaa gatttaacca aaggaagtga
    15601 cctactttca aggcttcaac acgtgtcaga gcttgaaaga gggccaaaag gattggcatt
    15661 tgaataaaga gcggaatcat ggacgctctc atgctgacgc cattctcttt gtagagagct
    15721 tgcgttgctt catagagctg ctggcgactt tccatatccg ttcctggata ctccgcttgc
    15781 aactttttca gctgaggttg aagctcctgc atcttccgtg aggaattcat ctgtatttgg
    15841 aacaacggca acagaagggt tcgaattaaa atggtaaaaa gtataatacc gattccaatt
    15901 tgaccgttga tagataggaa ctgaataatg ctggcaaacc agtaaattaa tctatcccac
    15961 gcatctgtag attgactggt cactggccct gttccgcagg ctgttaaaac aattagagat
    16021 gctaccagta gacctgccca tttaactttc tttttcaatc acaacacctt cctggtatag
    16081 tttagctagt ttcaaaacat ggatgaggtt ttgcttcatt tcttgatagg acaattcctc
    16141 tacacctttt cgagcaatga taacaaagtc atctgctacc agttgatgtt ggcattcaat
    16201 taagatgtga cgaatcctgc gcttaatctt atttcgcatg acagcgtttc ccaatttttt
    16261 gctgacagat aaacctactc ggaaatgctt ttgctcttta ggtaattggt agacaacaaa
    16321 cctccgattg gcgacattgt ttccttttgt aaaaatgtca ttaaaatctc gttcacgctt
    16381 gacacgatag ctttttttca aactgccact ccatctttca aaattacttc tattatacca
    16441 taaaattcaa aaaagccaat aaacataccg tttagaggcc tttcgaagca attatttgtg
    16501 cttttgcttg ctgaatttgc tggcgaatgg attcaaatcc agttccacct agcgaatttc
    16561 tgcgtgaaac ggctgtttcc gattctaaag ctgtataaat atccggtcca atgacaggcg
    16621 acagctcttg ataacgttcc aaaggaacat cttgtaaata atagcctgcc ttgctgcatt
    16681 ctaataccaa tttacctaca atctcatgcg cctggcggaa aggcagaccc ttgctggcca
    16741 gataatcagc caactctgta gcatttgaaa agtccttctc tgtcgattga gccatccttt
    16801 ccttatggac tgtcatagat tgcaacatcc ctgccaaaat atcgatagat actaaaatcg
    16861 tttccgcact atcaaacatg ccttccttgt cttcttgcaa gtccttatta taggttaaag
    16921 gtagggattt catgactgtc agtaggccaa ctaagttccc ataaactcta cctgtttttc
    16981 cccgaatcaa ttctgccata tctggatttt tcttctgtgg catgatggaa gaacctgttg
    17041 aaaaggtatc agataaggtg acaaattggt attcatgtga acaccagtta atgatttctt
    17101 cacacaaacg cgacatgtgc atcatgagaa tgctggcatt ggagaggaat tccagtataa
    17161 aatcacggtc agacacagca tcaagagaat tactataggg cttagcaaat cccattaaat
    17221 ccgacgtcat ctgacggtca atcggaaagg ttgtccctgc caaggccgcc gcaccaagtg
    17281 gggatacatc tgtatgctgc atgttgaata caaagcgctc actgtcgcgg ctgaacatgt
    17341 tatagtaggc caacaagtgc tgagcaaaac taatgggctg ggcatgttgc aaatgtgtat
    17401 agcccggcat gatggtctcc acatgttgct ccgccacgtc cagcaagacc tcctgcaagt
    17461 tagtcaactt gctgataacc tggaacaagg tatctttcaa atagaggtgc atatccgtag
    17521 ccacttggtc gttacgagaa cgagctgtgt ggagtttgcc tgcaactgag cctattttat
    17581 ccgtcaatag actttcaata ttcatgtgaa tgtcttcgtt acgaatatca aagaccagct
    17641 tgccagcctc atgctcctct agcaattctt ccaaaccagc ttgaatgacc tgagcttctt
    17701 cttgattgat aattcctgtg gctccgagca tcttgacatg ggctaaagaa ccttgaatat
    17761 catacttggc cagtttttga tcaaatcgga tggaagctcc gaattcttct acccattcct
    17821 caagactggc ttcaaagcga ccaccccata atttctttgc ttccatacat tcctactttc
    17881 tagtcttttt tatgaatttc tgcgtttacc ttagtcggca agccccaaag cttgatgaaa
    17941 ccaactgctg catcttggtc aaaggtatct gcactggtat aagttgctaa gtcttcatca
    18001 taaagagaat ttggtgattt ccgagcaacc actttggctg accccttata caatttcact
    18061 tttgctgtac cattcacgac cgattgagtt gcttgcaaat aagctttcaa ggcctgggtt
    18121 gctggattga accacaaacc attgtaaatc aagttagaga gttcatttga aacaatcggt
    18181 ttgaaatgcg atacttcgcg caccaaggtc aaatcttcaa tttccttgtg agctgtcaga
    18241 agggtaatag cacctggaca ctcgtaaatt tcccgtgact tgattccgac caaacgattt
    18301 tccacgtggt caatccgacc cacaccatgc ttaccagcaa tgacattgag tttttggatg
    18361 agatttgcca ggctgagctt ttctccattt acagcaacgg gtacgcccgc ctgaaactca
    18421 atatcgacat actcaggagt atctggtgca ttttctggag aagtagtgat gccaaaagca
    18481 tcttctggcg cttcattcca tggattttcc aagactccac actcattggc acggccccaa
    18541 agattttggt caacggaata aggactatcc aaatctgctg ggactggtac accattttct
    18601 ttagcgaaga tgatttcttc ttcacgcgcc catttccatt cccgaacagg ggctacaact
    18661 ttcaaagttg ggtccagggc tgcaatggct acctcaaacc gcacctggtc atttccctta
    18721 ccagtacaac cgtgggcgat agtggttgct cctgtcttat gagccatttc caccaacttt
    18781 ttggaaatca agggccgact gagagctgat accagcggat atttttgctc ataataggca
    18841 tgagcttgca gggctggtag gacatattct tgggcgaatt cttcttttac atccaataca
    18901 tgggactcaa tggcaccaat ggacagtgct ttatcatgaa tgaattcaag atctttcccc
    18961 tcacctacat ccatacaaac cgcaatgaca tcatagtctt ttttcaacca agcaatcgca
    19021 actgaagtat caagtccacc tgaataggct aaaatcaatt tttcttttgt cataagcaat
    19081 ctcatttctt tttattttta taaaacttag tgactattat agtgtatatt tatacttttt
    19141 gcaacataaa tatacaaatt tttgaaaatt ttttgtatgg tttcaatatt gatttgaaaa
    19201 taagcaaatg aaagaggcga ctgacgtcag ctttctagct cagtaatcct ccaatcattc
    19261 caatacgcaa acacccgcaa gatacttgtc taacacttcc atgtttgata taatgaataa
    19321 ccaatctaga aaaggagcaa aatatggaaa tctggaacgc ctacacagcc gacggtcagc
    19381 tgaccgacca caccctcaca cgcggtgaac ccattcccga cggcctctac cacctggtcg
    19441 tcgagtgcat catccgccac cacgacggca gcactctctt catgaaacgc gacagcacca
    19501 agccctccta ccctgactat tatgaagcga cagcaggagg ttcagctttg tttggggaaa
    19561 tagcagagca ggctatttta cgcgaagtcc gcgaagagac aggaattgaa ctaacagctg
    19621 accaactccg ccaccataca cattttgttg cctatgatga ccagtgcatt ttccactgct
    19681 actgggccga aaccgactgg gacaaatcga ccatccaact ccaagccgaa gaaaccagca
    19741 actacatctg ggtcccacaa gaaaagttga aagattttct tggaacagaa ctggtcattc
    19801 caaggcagaa ggactatgtg gagaggctgt ttttagaaag ctaaaagagc cagagcgaga
    19861 atgaaactca gtaaaagatg agataaaaag tgactgagac gatttctccc aaaaagaatg
    19921 cgaccaccta tcactctcac cccgcaagcc aataataagc ctaatataaa tcccaaaacc
    19981 atctgccatt ccaacagact gattaaaact gggcaggcat ataaaaccag taaccagcta
    20041 ggaagttgct tgcgatatac ccaagcagat agcggtaata gccccaaata aagcacaatc
    20101 aaccatttaa caacaataat catatagaac tcctttccct atcaatttat catgaggggc
    20161 taagcccctg tcaagaggac attatgaaaa caggacaagt catgcaacaa ttcggtatca
    20221 aacgggatac gcttcgtttc tacacagaac aaggactctt acaaccgcaa ctgattgacg
    20281 gcaattacta ctggaacgaa gcagaaatca acaacctaga aaatatccta ggacttcgcc
    20341 aattaggttt atccgtcaaa gccattatcc gtatcaaaga acttcacgac accaaatgcg
    20401 gcagtctcga acagctaaaa gaaaacaaac aggtcatact ggatgaaatt gtcgaccgtg
    20461 aaaaacaaat cctcctgctc caagaacaga aggaaaatct agaaaatcta ctccagcaga
    20521 ttgaggaaaa attacagaat ctataacaaa atccccaccg tcacaggaca gtggggatac
    20581 ttttatttca aacctgcaac taggtcagca atatcagctg gtcgagtacg acagcagcct
    20641 ccaactacct tggcacccag tttgtgccac acaagagtat tgtccaaaag gctgtggcta
    20701 tggtcagctt gttctttcca aatttgagtg gtgccatcat agacttctcc agaatttgga
    20761 taggtgacaa atgttttatc cgttttctct ctcaacttgc caaggaaagc tgagtacagc
    20821 gagggagctg tacagttaag accaagcgcc aaaatctgct cactgctgtt gaccagctct
    20881 gctatttttt caatagacgt tccgtcagag attgactgac cgtcctgcga ggtgaaactg
    20941 atataggctt cgacatttgg gaaatcatct gtcagcaact ccaccaaggc ctgtgtttcg
    21001 agaacattgg gaatggtttc caaagctaag agttccgctc cctgttctaa gaggagttcg
    21061 attctgcgac ggtggaaatc ttttaactct gacagactaa tgttgccata ttcacccgta
    21121 tattcagcac cgttggccaa ataagccgca tagggaccca cgtcacctga aatgagagga
    21181 taggtgcgac ttgttttttc agtctcagac aagtctgccc agacctcatc acgcgcttcc
    21241 ttggtcaaat caacggtcaa gcgaatgagt tcttcagcct ctgcttgtga caaaccagct
    21301 tccgccaaac cttcaaaagt tgcctgatag gttgaggttg tcaccaagtc ggccccagca
    21361 cgaatgtaat ccttgtgaat gtccttgatt agctgaggat cctccaaaag atacttggca
    21421 gaccaaagct tgcccgatac atcatgacct cgaaattcca attcagtccc aagagcaccg
    21481 tgtaaaatga tatattcctt ttgttctaat aattccttaa aacgccccat actcgaaccc
    21541 tcctaccact ttttaaagcg aatatagtga taaatataac aaccaatcat aaatggtaca
    21601 ccaaagtaga gaccggcacg ctgtgaagga tcccaaccga ttccgatgat agaaataacc
    21661 agcaaaacaa ctgtaatcca aggcaatgtc ggagagaagg gtgtcttata ttccaattca
    21721 tcttcgctat gattcttcaa aaattcacgt cggaagccga tttgtgccaa agggattgcc
    21781 aaccaagcga tgacaaccgc aaaaccagcg atagaaacca gggccaagaa gatggtatct
    21841 tctgcataaa ttgatgcaat taaagcaatg accacaccaa tcatggacaa aatcatgcca
    21901 cgcataggta caccgtgctt gttaatcttg actaattcct tgctgatcat gccttcatta
    21961 gccaaagacc aaagcatacg gcttgaagcg tatagccctg atgtagaggc cgataaaata
    22021 gctgtcaaga taatgaagtt cataatgtca gcagcgtacg gaaaaccgat cttgtccaag
    22081 acaagtacga atggagcttc agttacacct gcttctgaca taggaagtag agatgccaaa
    22141 acaacaattg tcaagacaaa gaagataacc aaaagaccaa ttgttgattt aatagcttgc
    22201 ggcacggctt tcttaggatt atctgtctcc cctgcggcaa ttccgatcat ttccacacct
    22261 gaaaaggcat agttaaccga caacataact gaaatcaacc caactaggcc gttaggaagt
    22321 aagccttggg ctgtaatatt agtaaagagc ggcgcagcat tggtcccctc aaatggcaaa
    22381 ataccaaaaa tagctaaggt tccgagtacg ataaaggctg caatggcata gaccttgata
    22441 gacgagagtg catcctccgc cttggcaaac cagccaacag atagggtgtt caaaccaaag
    22501 acaatcactg caaaaatcgt cgcaaaaatc caaatcggta cactaggaaa ccagcgttgc
    22561 atgagctggg ctgccccaac aaactgcgag gccagagcaa cgacccagca gagccaatac
    22621 atccaggcca ccataaaacc agtacccgga ctgatgaact tggtggcata ggtgtgaaaa
    22681 gaacctgtga ctggcatggc taccgaaagc tcaccaagtg agaacatgac cagatagacc
    22741 atgatagctc caaataggta ggctgcaaca gctccgaaag gtccagcctg tgcaatggta
    22801 tagcctgaac tcaagaacaa acctgtcccg ataaccccac cgatagacaa catctgcaaa
    22861 tgacgactgt tcatctctcg gttaaaggtc ccttgatttt caaaattatg attttccata
    22921 aactctccta aatagtaatg atttatttat gataacacag tttttcagaa aatcgttata
    22981 ccgttttcaa tacaactgtt atagttatca gttatagcaa aatccccgct atcacaggac
    23041 agcggggatt acttgtctta caaagatttc aacatattgt caatatgctg gatggatttt
    23101 tcacggccga gcaggtaaat agtatttggc aactctggtc cgtgcatttc acctgagacg
    23161 gcgatacgga ttggcatgaa gaggtttttg cccttgatgc ctgtttcttt ttggactgcc
    23221 ttgatttgtg ggaagatatt gtctggttgg aaatcttcgt cggtcatggc ttccaatttt
    23281 gccttaagag cattgaggac cgttggaacc gtttcgcctg ccatgacttc tttttcagcc
    23341 tctgtcaact ctgggaaatc agagaagaaa agatctgtca atggcacgat ttcatccgca
    23401 gatgacatct gtggtttgta gagctctact aatttttctg ccttatctgt caaacgacca
    23461 gcttcttcca aaaatggctt agcaagattg aaaacagtct ccaaatcagc attcttgatg
    23521 tactcattgc tcatccagtc cattttcttc tggtcaaagg cagctggtga cttgctaagg
    23581 cgattttcgt caaagagctg aataaattcc tcacgagaaa agatttcatc ttcgccacca
    23641 gggttccaac ccaagagacc gataaagtta aagacagctt ctggcatgta acctttacga
    23701 cggtagtctt cgatgaactg aagagtattg gtatcacgtt tagacaactt tttaccagtc
    23761 tcagagttga taatcaaagt catgtgacca aattctggcg cttcccaacc aagtgcttca
    23821 tagaccatca attgcttggg tgtattggca atgtggtcgt ctccgcggat tacgtgcgaa
    23881 atctccatca aatgatcatc aatgaccacg gcaaagttgt aggttgggta gccgtcacgt
    23941 ttctggataa cccagtcgcc accgatgttg ccaccttcaa actcaatctc gcccttaacc
    24001 atgtcattcc acttgtagat accagcttca ttgacagcca agcgaacagt tgggacaatg
    24061 cctgctgcct cacgctctgc gatgtaggct gctttttcat cttcagacat accaaggtat
    24121 tcgttgatgt agcgaggtgt ttctcccgcc gcttcctgac gctcacgctc cgccgccaac
    24181 tcttcttctg tcacgtaaga cttgtaggcc ttgcctgaag ccaagagctg atcaacatac
    24241 ttttggtaaa tatccaaacg ctctgattga cggtattgct catgggtttc tggactttca
    24301 tcccagtcaa tacccaacca acgcaggttt tccagctgag aacgctcgcc gtcttccaca
    24361 tggcgtttgc ggtctgtgtc ctcgatacga ataaggaaag taccgccatg atgacgggca
    24421 aaaagatagt taaacaatgc tgtacgagca tttccgatat gcaaaagtcc cgttggactt
    24481 ggtgcgtaac gcacgcgaat tggtttagtc atgtttctct cctgtaaaat tttcatactc
    24541 aatgaaaatc gaattcagac taggcgacgt agaagcagat agaactgaag ttcatcaagt
    24601 caagtcaacg acgcctgaat ttgattttcg aagagtagca atcaagaaca ttatagcata
    24661 gatagaccta agataacaga aaaatcagcc taaacagact gattttgagg tgttttttgg
    24721 ttgcgtgcca gccaatagag gacatagagg actaagattc cagtagctgt taggaaaaat
    24781 ccgctaatct gattgacagc caataccaag accagacctg ataccagtag tcgagtaaag
    24841 gcttggccca acatgaagta ggtagatact gctccgccga tagttgctaa ctgctcctct
    24901 ggcatggagt tgacaaactt agcgttaaat ttaggtccac tagctccaga actaattccc
    24961 attgtagtaa ggaagaagaa aataattggc agttgatgta gtagcattcc gataaaaacg
    25021 ccaagaagag agaaggtggc tgccacttca agcgtcacca tgctggtctt tttgaagagg
    25081 ctaaagacta aggtcgatcc caagatattg ccaacaaaga agattagaat ggtcagggca
    25141 agggttgttt caacattaag gaagacaagg cctgggtctt cgctaatcaa gaggactaga
    25201 ataggataaa ggatagctcc acaggcgttg ataagagggt tggtaatcag gaccaggcgg
    25261 aactcgggta tcttgcgcag ctccacgatg gcttgcttga aggaagctag aatgcctggt
    25321 cccttggttt tttgctcagt ctggctcggc tgctctgcta ttttcaaagg ctgctccgtc
    25381 aggagtttgc gaaagactgg cgtcagcagc tgcatgatga ggagagaggc taaaaaggtg
    25441 ccggcgttta gaaaggctag gttttggtag gagaggaggc cgaccaagag ggcagagagg
    25501 gcctgaaagg cgatgttgag gagactggta acggtctggc gaaaggccga gtactgctcc
    25561 cgctcttcct tgggcgctac gcgtaatccc agaggtgtat agaggccgtt ttcatagaag
    25621 ccagcgaagt ctgcaaagac attgaaagtt gcagccacta cgacaatcca gagggctggc
    25681 tcaaagccca tgcagaatcc gaggatgacg tagaggacca cacgaaagag gagggtcagc
    25741 ttgatagtgc tgattttgtt gaccgtcttg tctgccagat aacccgtaaa gaggcccatg
    25801 aagctaggga agatttccga gaaggtcaca atcgccagcg ccagacggct gttgggcacc
    25861 agcaagacat agttcatcag ggccagataa tagaccacat cgccaaaatt ggacagcata
    25921 tccgcagtca gtacccatag gtaggtagca tttttcaaaa tctttttcat aataatccct
    25981 ttctttgttt tattttcaga atatttagat attttatctt gcagaggagc ctgaatagac
    26041 tttcctcttg ccactttatg cagaataaat cgttaggttt gagaaggcca tatctcctgt
    26101 gatatgtagc atcttttctc ccataccagt tgcgtagtta ttggttgttg acatagcact
    26161 gtccagctcc accaccgctc gccagtcagc aggcagatag agtgtgatat ttgagaaggc
    26221 cgcatcgata tgaaaatctg ccttatctcc cagaataatc gcctgatcaa aatagatcgt
    26281 actagatcca aaggctacat ccacactatc atggagaaaa ttatcgtcgt gaatatagtg
    26341 agttgaagag ccaaaagctg tatcacgccc cttatcacca atcacccctg tgacaactcc
    26401 atgagccagt ctgcgcttcc ttggtttaaa aatcagtttc aatccaaggc acagcaggac
    26461 aagtgacaga accatattcc aagtcccgaa cttcacccaa tcataaactg agttcaccgc
    26521 tataaaagcc agaccgaaac aaaagatact agcaagccaa tccagcttca ccaagcggtg
    26581 aaaaccagtc acaaaggtta aaacaaacca gactgttgtc caaaatggca gagccaaatg
    26641 caagcccagt gaatccctaa acaagaccaa tcctgccaag accagcagag caattcctaa
    26701 accatatttt ttcatcttcc tacctcattt cctgtaactt ttctttaagc aagtggtaat
    26761 agtgccgcga cacatgaact tccttgtggg tcttgtagaa ggcaattcga ctggtacccg
    26821 agaaggactt gtccagcgaa tagaccgcct tactgttaac aatggttgac ttggccactc
    26881 ggcaaaagta gattggcaag tattcttcca gctcatagag cttcatcttg acctcatagg
    26941 catcgtcgcc tgtatgggca aaaatcttgg tcccgtccgt ttcaaagaaa agcacctcac
    27001 tcaaggataa gaaatactca ctgctcccct tataaaagac aagcgaggga cggctaactt
    27061 gttgcagagc ccgctgaatc gcttctactt ctggccctag ctgacctgct cggatgacaa
    27121 cttcaacctg atctaagtta tcatcaaatt caatcctaac tttcatagct ccctcctttt
    27181 tgataggtct attataccaa ttccagctac agttttacaa gggcatttca gtaagtggta
    27241 aaaattagac aggtaagtgg taaacattca tcattaaaag tcgctagaat tcaagtatct
    27301 atttctccat cttttcagag acagttcacc tctaacagat tactttttat actcaatgaa
    27361 aatcaaaaac agactagctc caaaggtttg
//
LOCUS       DASFQS010000016        26600 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.016, whole genome shotgun sequence.
ACCESSION   DASFQS010000016 DASFQS010000000
VERSION     DASFQS010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 26600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26600
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.016"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            87..281
                     /locus_tag="U1041_000643"
                     /pseudo
     CDS             87..281
                     /locus_tag="U1041_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007894915.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            381..791
                     /locus_tag="U1041_000644"
     CDS             381..791
                     /locus_tag="U1041_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4767771.1"
                     /translation="MNIKEVSDVTGLSADTIRYYERIGLIPKIARKSSGVRNFSESDV
                     AILEFIRCFRSAGMSIERLIEYMGLVQAGDSTVEARIDLLKEEQEELRSRLSEIQQAL
                     NRLDYKIENYQTILRGAENQLFTDGGSSFKKGRG"
     gene            complement(803..1126)
                     /locus_tag="U1041_000645"
     CDS             complement(803..1126)
                     /locus_tag="U1041_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3270 domain-containing protein"
                     /protein_id="HEM4767772.1"
                     /translation="MALRHYQSHEYQYEEYIPKEKKANFQTYQAKNTNKERLKELLFF
                     VNIAFFSLITVIASYVYLSVGIPVFVAIILASATGFLGLRLVQIGLKKKFKPKQVIRK
                     MNNEV"
     gene            1287..2216
                     /locus_tag="U1041_000646"
     CDS             1287..2216
                     /locus_tag="U1041_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM4767773.1"
                     /translation="MEKIIITATAESIEQVKELLAAGVDRIYVGEEDHALRIPTNFTY
                     DELREIAELVHSAGKELTVAANALMHQDMMDNIKPFMELMREIKVDYLVVGDTGIFYI
                     NKRDGYNFKLIYDTSVFVTSSRQINFWKDHGAVEAVLAREIPSEELFDIAKNLEMPAE
                     ILVYGASVIHHSKRTLLQNYYNFTKADETDLSRGRGLFLAEPSDPDSHYSIFEDKHGT
                     HIFINNDIDMMTKLSELDEHGYHNWKLDGIYCPGQNFVEIVKLFVQARDLIEKGDFTY
                     DQAFLLDEQVRKLHPAERGLDTGFYEFDRNKVK"
     gene            2394..3680
                     /locus_tag="U1041_000647"
     CDS             2394..3680
                     /locus_tag="U1041_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM4767774.1"
                     /translation="MSKTLKRPEVLSPAGTLEKLKVAIDYGADAVFVGGQAYGLRSRA
                     GNFTMDEMREGIEYAHARGAKVYVAANMVTHEGNEEGAGAWFRELRDMGLDAVIVSDP
                     ALIVICATEAPGLEIHLSTQASSTNYETFEFWKELGLTRVVLAREVTMEEVAEIRKRT
                     DVEIEAFVHGAMCISYSGRCVLSNHMSKRDANRGGCSQSCRWKYNLYDLPFGEERRSI
                     KGEIPEEFSMSAVDMCMIDHIPDMIENGVDSLKIEGRMKSVHYVSTVTNCYKAAVDAY
                     LESPEKFEAIKQDLIDEMWKVAQRELATGFYYSPPSENEQLFGARRKIPEYKFIAEVV
                     AFDKETMTATIRQRNVINEGDQVEFYGPGFRHFETTIQDLHDSNGEKIDRANKPMELL
                     TIKLDREIYPGDMIRACKSGLINLYQEDGQSLTIRA"
     gene            complement(3840..4163)
                     /locus_tag="U1041_000648"
     CDS             complement(3840..4163)
                     /locus_tag="U1041_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767775.1"
                     /translation="MKRFLEVIFEQITVFLEHGKAPKSIEPDSKEEIKNNLELALYKK
                     AAVHVIYGDRSFTGDIVKYDTDRQRIIMKNFKRQVTSIIKIEDIKKVTLVPDSIKTSQ
                     QQTKG"
     gene            4255..4470
                     /locus_tag="U1041_000649"
     CDS             4255..4470
                     /locus_tag="U1041_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbC family protein"
                     /protein_id="HEM4767776.1"
                     /translation="MAEFTFEIEEKLLVLSENDKGWTKELNRVSFNGAPAKYDIRTWS
                     PDHTKMGKGITLSNEEFQVLLDAFANK"
     gene            complement(4482..5021)
                     /locus_tag="U1041_000650"
     CDS             complement(4482..5021)
                     /locus_tag="U1041_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEM4767777.1"
                     /translation="MKRTSIKSLVYIAIGTALISTLSQISLSIGPVPFTLQTLAIGLV
                     ACLYKPKEAITSVSLYLVLGAIGLPVFAGFSGGFAALTGPTSGFLWGFLLYTIITSAL
                     TKSDSSPVTIFLACLLGTASCFLIGCLVFKLVSGASWSDTLAWTVLPFILPDLVKIFI
                     VTLCHRLLQPITKKEAFFS"
     gene            5226..5963
                     /locus_tag="U1041_000651"
     CDS             5226..5963
                     /locus_tag="U1041_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014713635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEM4767778.1"
                     /translation="MTELLDIYRTLKSKTWVDLTHQINEKSPHFPALPALEKKALFTH
                     KDGFFVEQFTVVGQYGTHIDPPIHFVEGARYLDEIELKDLLLPLYVIDKSSAVIANND
                     YEITKQDILDFEAEYGPIAPESFVAFRSDWSKRWPSQDAIRNLDEDGVQRTPGWSHEA
                     LEYLIEERQVKAVGHETLDTDSGVSAAKHGGSLPEEYYLLSKDIYQLEVLANLDQVPP
                     TGALISIAFPHWEKASGSPVRAIAILP"
     gene            complement(6014..7363)
                     /gene="gorA"
                     /locus_tag="U1041_000652"
     CDS             complement(6014..7363)
                     /gene="gorA"
                     /locus_tag="U1041_000652"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEM4767779.1"
                     /translation="MKEFDIIAIGGGSGGIATMNRAAIYGAKAAVIEGSHLGGTCVNL
                     GCVPKKIMWYGSQVAEAIHHYGPEYGFTSQDVKFDFATLRKNREAYIERSRASYGNTF
                     NNNGVEVIQGFARFVDNQTVEVNGELIRAKHIVIATGAKPVVPAIPGSELGIVSDDVF
                     AWEELPSSVAVIGAGYIAVEMAGLLHGLGVQTDLFVRGNRPLRSFDTYIVDALMEEMQ
                     RTNLPLHTGKTPVSLEKTDDGQIQINFADGSNHIAQKVLWAIGRKPNIDKLNLEATSV
                     QLTSSGHISVNEYQETAVPGIYALGDVTGEKELTPVAIKAGRLLAERLFNNKPTAKMD
                     YTTIPTVVFSHPAIGTVGLTEDEAIAQYGQDNVKVYTSAFTSMYTALENNRQMAKFKL
                     VTVGENEKVVGLHGIGYGVDEMIQGFSVAIKMGATKEEFDAVVAIHPTGSEEFVTMR"
     gene            7577..8743
                     /locus_tag="U1041_000653"
     CDS             7577..8743
                     /locus_tag="U1041_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEM4767780.1"
                     /translation="MLKTKKAKIALFSGLSVAAVALIGGALVFGGVLGGSSPTSTEKV
                     ATSLTYTVAKEGSIASSTLLTGTISAADEQYVYYDPSKGDLSEVLVEPGTQVEVGTPL
                     IRYDATELQSALDTAVRGRDKIGRQIYDLRNNGQTVQTTGDAATDEAATAAAQRSVDM
                     QLADLNDSYADAQAAVDKAYTALQEATVTSAVAGTVVEVNKSVSKSSTSSQTVVHIVN
                     QGSLQVTGNLTEYDLANIAVDQEVKLTSKVYPDKSWTGKITYISNYPSTEQTASVATG
                     TSGGSGAKYPFKAALTSELGELKQGFTVNIEVVNTTNHILIPVTAVVPEGDKNFVWTI
                     VEGKAKKVEVTLGNADALNQEVTAGIAAGDQVITIPTPDLEEGKEVEAYEEPAN"
     gene            8724..9419
                     /locus_tag="U1041_000654"
     CDS             8724..9419
                     /locus_tag="U1041_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767781.1"
                     /translation="MKNQLIRLTNINKSYKNGDQELRVLKDIDLEVEEGEFLAIMGPS
                     GSGKSTLMNIIGLLDRSTTGNYWLEGEEVSQLSEKKLASVRNDQIGFVFQQFFLLSKL
                     NALQNVELPLIYAGVPANQRKKLAKRYLEKVELAERMTHLPSELSGGQKQRVAIARAL
                     VNTPAIILADEPTGALDTKTGEQIMELLTELNNEGKTIIMVTHEPEIAAYAKRKIVLR
                     DGVITEDSRREEV"
     gene            9420..10670
                     /locus_tag="U1041_000655"
     CDS             9420..10670
                     /locus_tag="U1041_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4767782.1"
                     /translation="MENWKFALKSILAHKMRSLLTMLGIIIGVASVVIIVAMGTGMSK
                     SIEKSLAGDQNNVQVYFTPYIPVEGAGTTGIFGSIGGGEMSMEEEPDLTDSMLKGLLE
                     IDGLSGYYISASSTSTVAAGNAQADNVFITGVSQSYFDIKALEILAGRRFTANDYSRF
                     SRIIMLDVALAEKLFGSTDAALNQIVSVNANSYLVVGVYKDPKAGTSLYGFNSGGNAI
                     MTNTQLAAEMGTKENSGLYVHVEDVSRAAEVGQAAAAYLTNITGLKEARYDIYDMSAM
                     LDDFKNQMSGVTTFIGAVAGISLLVGGIGVMNIMLVSVTERTREIGLRKALGATRGNI
                     LMQFLIEAMVLTTLGGAIGLAIAQAIVFILNATKVMGEMTAEISIPVVLGSLAFSAAV
                     GIVFGVLPANKASKLDPIEALRYE"
     gene            10793..11857
                     /locus_tag="U1041_000656"
     CDS             10793..11857
                     /locus_tag="U1041_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEM4767783.1"
                     /translation="MVELGISTFGETTPLEKTGETYSHDERIRQLVKEIELADAVGLD
                     VYGIGEHHRKDFAVSAPEIVLAAGAVNTKHIKLTSAVSILSSMDPVRLYQQYTTIDAL
                     SNGRAEIMAGRGSFTESFPLFGYDLHDYEELFDEKLDMLLEIDKETNLKWDGHFTQSV
                     DNKPVYPRPVQEDFPIWVATGGNVESTIKIAKKGLPIVYAVIGAGAHRFKPLVDAYRK
                     VARNSGHDPKKTKVAAHSWGWIADDHDKAVEEYYHPTKVITDNIAKDRPHWSEMTKAQ
                     YLYSLTDEGATIVGDPKRVAEKIIKTIETLDLDRFFLHLPIGSMPHEDVLRAIELYGK
                     EVAPIVREYFAKKEENQSQD"
     gene            complement(12130..13620)
                     /gene="lysS"
                     /locus_tag="U1041_000657"
     CDS             complement(12130..13620)
                     /gene="lysS"
                     /locus_tag="U1041_000657"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEM4767784.1"
                     /translation="MSTEHFEELNDQQIVRREKMTALAEQGIDPFGKRFERSANSAEL
                     KSQYEDKSKEDLEELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEE
                     NYEIFKKADLGDFIGVEGDVFKTNVGELSIHARKLTHLSKALRPLPEKFHGLTDIETR
                     YRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFI
                     THHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQ
                     AYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQDTVINIHEPFKRIHMVDAIKEQTGVD
                     FWQEMSFEEAKALAAEHKVPVEKHHTEVGQIINSFFEEYVEATLIQPTFVYGHPVAVS
                     PLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATG
                     VDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK"
     gene            complement(13710..14333)
                     /locus_tag="U1041_000658"
     CDS             complement(13710..14333)
                     /locus_tag="U1041_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4767785.1"
                     /translation="MKIYFVRHGKTEWNLEGRFQGYSGDSALLPESYQDLEKLGKYLA
                     EIPFDAIYSSDLQRAHSTAVEIAKANHHCQTVLTTQQLREWNFGTLEGSKIAIFRAIY
                     PKQAWALKHNLALFNNDLFEAESVRQVTQRMVDFVQSLKGQDMETVLIVSHGAILTAS
                     IHRLLGFPLDQLRHRGGLDNASVSILETTDFEHFTELTWNDTRYKSH"
     gene            complement(14336..14818)
                     /locus_tag="U1041_000659"
     CDS             complement(14336..14818)
                     /locus_tag="U1041_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA deacylase"
                     /protein_id="HEM4767786.1"
                     /translation="MAKKVKIKKTLVDQILDKAKINHDSLVLNALDGQLPPGIEEHEI
                     YKTLALTGDKTGPIIGIVPITEHLSEKKLAKISGNKKVSMIPQKDLEKTTGYVHGANN
                     PVGIRQKHNFPIYIDQSALELGHLIVSAGEIGRSIKIDSQVLADFVKADFADLIEGRD
                     "
     gene            complement(14818..15660)
                     /locus_tag="U1041_000660"
     CDS             complement(14818..15660)
                     /locus_tag="U1041_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HEM4767787.1"
                     /translation="MASWISRIIKGMIIALGFILPGVSGGVLAAILGIYERLIGFLAN
                     IRKDFKENFLYFVPVGIGGILGIALFSFPVEFLLQHFQVPVLWAFAGAIVGTIPSLLK
                     ESTQKSKRDSIDLAWLIGTFIISGLLLYNLSDLVGTLPATFTSFVLAGALIALGVLVP
                     GLSPSNLLLILGIYTPMLNGFKSLDLFGTFLPIAIGGVLAMVAFSKAMDHALKVYHSR
                     VYHFIIGVVSSSTLLILIPQASNKESISYAGADFVTWIAAIVLFILGAWLGLWMSKLE
                     EKYK"
     gene            complement(15762..16310)
                     /gene="thiT"
                     /locus_tag="U1041_000661"
     CDS             complement(15762..16310)
                     /gene="thiT"
                     /locus_tag="U1041_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupled thiamine transporter ThiT"
                     /protein_id="HEM4767788.1"
                     /translation="MSTSKLPILAEVAIFSAIALVFDKIPLFTMPQGGSVSLVMLPIL
                     LLALRHGLGVGVLTGGIVGTIQLFYGGYFLNVFQVFLDYALSYAGIGLAGLVAPTLSK
                     QKNLKNATLIITLASFLGGSIRLVATFLSGIIFYADYAPTGTPVWFYSFTYNISYILP
                     STAIASILLILLYRARPGFYNL"
     regulatory      complement(16369..16464)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(16488..17342)
                     /locus_tag="U1041_000662"
     CDS             complement(16488..17342)
                     /locus_tag="U1041_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HEM4767789.1"
                     /translation="MRKKLNPMIVVVFFLSFFALIFITGVTGNTVNKTEVANEPAVTQ
                     SNTSTSSKTTNSSSSYYIANALEMKPIVDVSAWQRPSEIDYDTLSKNISGAIVRIQSG
                     SHTKNENTATDKNGLDKSFDTHIKEFQARNIPVAVYAYVTGNSIESMQEEAQSFYKAA
                     NKYKPTFYWLDVEEYTMDDMNAGVEAFRKELETLGAKNIGIYVGTYFMEDHSINVDKF
                     DAIWIPTYGDDSGYYNAAPNTDLDYDLHQYTSRGYVNGFEHHLDLNIITTLKDPNEVY
                     QKLFTTPE"
     gene            17558..18061
                     /locus_tag="U1041_000663"
     CDS             17558..18061
                     /locus_tag="U1041_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767790.1"
                     /translation="MHDKSEKVRRVSQLVVLSSLTIVLRVVFGPFPNIKPLTAIFLIV
                     LSYFSLLESWILMILVMVGSGLLFGFGTVVLWQVLSFAFIQFIWWLAIGPFIKKENIP
                     LWLQSLLAGILVFLYGLTISFLSATQFGTSPIVFWLNGLVFDGLHAASTVLFYPIIDY
                     IFRRFYK"
     gene            18058..18423
                     /locus_tag="U1041_000664"
     CDS             18058..18423
                     /locus_tag="U1041_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4430 domain-containing protein"
                     /protein_id="HEM4767791.1"
                     /translation="MKKISIMLMVVFSLFLAACTNTTEKQSNLAIEVTLQITTKDKEN
                     RQEVTAEEGDSVMDVLKEHHDIVEDNGLITEIDGVSQDTSTNTYWMYKVNGQMADKGA
                     KDLTVANGDEIEFYLETFE"
     gene            18560..19774
                     /locus_tag="U1041_000665"
     CDS             18560..19774
                     /locus_tag="U1041_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM4767792.1"
                     /translation="MKIDKRQLLNYSILIPYLILSVIGLVMVYSTTSATQIINGRNPF
                     RTVINQAGFWIVSLVAIYTIYRMKLSFLRKKAVIYSVILVEVFLLAISRLFPPIKGAH
                     GWIPLPIAGTLQPAEYLKLIIIWYLAHEFAKQQADIRTYDYVSLIKGSWIPKEFTDWR
                     VVSLLLLGLVATLPDLGNATIIVLIMVVMISVSGIAYRWFSTAVLGIVAASTVILGTI
                     RILGVETVEKIPLFGYIARRFAAYFDPFGNATNSGLQLTHSYYAMSNGGWLGRGLGNS
                     IEKKGYLPEAHNDFAFSIVIEELGFVGASLILAILFFLIIRIIIVGVRARSPFNAMMA
                     LGMAGMLLIQTFVNIGGISGIIPATGVTFPFLSQGGSSLLIISIGIGFVLNIDASEKR
                     RLIEEEIERTLI"
     gene            19795..22491
                     /gene="ppc"
                     /locus_tag="U1041_000666"
     CDS             19795..22491
                     /gene="ppc"
                     /locus_tag="U1041_000666"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEM4767793.1"
                     /translation="MAIQKLENYNNKEAIREEVTILTSILEEVAAQMMPAETFAKIVE
                     LSQLSRQDDYQALIAIISQLNNDELAVISRYFAVLPLLINISEDVDLAYEINHQNNID
                     QDYLGKISTTIDMVSKQENAAEILEKLNVVPVLTAHPTQVQRQSMLDLTKHIHELLRR
                     YRDVKLGLLNKNKWEDELRCYIEIIMQTDMIREKKLKVTNEITNVMEYYNSSFIKAVT
                     KLQREYKRLAAEKGIVLNNPRPITMGMWIGGDRDGNPFVTAETLKLSALTQCEVIMNY
                     YDEQLYKLYRNFSLSTSIVNVSTAVKMLADLSEDSSVYRENEPYRRAFHYIQMKLANT
                     RDYLVHNKPSAVRYSNVAEFKADLLAIKQSLIENKSMALLKGDFTELLEAVEAFGFYL
                     ASIDMRQDSSIHEASVAELLASARIVEDYSSLSEEAKCHVLLKQLETDPRILSATHVP
                     KSEQLEKELAIFAAARELKDKLGEEIIKQHIISHSESVSDLLELAVLLKEVGLVDVDK
                     ARVQIVPLFETIEDLDNAPDTMRQYLQLDLAKRWIAGNKYYQEIMLGYSDSNKDGGYL
                     SSGWTLYKAQNELTQIGQDYGVNITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRIR
                     LTEQGEVIGNKYGNKDAAYYNLEMLVSATLDRMVTQMITDPNEIDGYRETMDEIVSDS
                     YRIYRDLVFNNPHFYDYFFAASPIREVSSLNIGSRPAARKTITEIGGLRAIPWVFSWS
                     QNRVMLPGWYGVGSSFKRFIDKHPDNLSKLQKMYESWPFFRSLLSNVDMVLSKSNMNI
                     AFEYAKMCESEEVRNIFHVILDEWQLTKEIILSIEQNDELLAELPFLKASLDYRMPYF
                     NVLNYIQIELINRLRRGELSKEQENLIHITINGVATGLRNSG"
     gene            22607..23110
                     /locus_tag="U1041_000667"
     CDS             22607..23110
                     /locus_tag="U1041_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEM4767794.1"
                     /translation="MSIKLDEYEKEVIGIAEEISYYLQKSGATFADSQDIAQDVLVKL
                     LESDIVLPFEKLRAWLYRSAVRAYIDKYRRDKRYHEILQKEFFRREDLLVYDQEGYEE
                     LYQAVADLPEKYQQVIDLYYFQDMSVKEVAHILGTGQSWVKIILYRGRKQLRKILEER
                     GYDYEDF"
     gene            23097..24074
                     /locus_tag="U1041_000668"
     CDS             23097..24074
                     /locus_tag="U1041_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti sigma factor C-terminal domain-containing
                     protein"
                     /protein_id="HEM4767795.1"
                     /translation="MKTFEEVTKKSKRKNLWKTVGLSILGLLLITGATLKTLQILTAN
                     NGEKIYQEHELLSQVAYPNIEYSTYYYKATSLFAGAVHADRHKDLAGVPVAFGDYEYH
                     YDWLGTYLNFSQDEPSYKGEIAYDRQTWSKLPLFYNTEKVDTDDFATVPSQELSLVKN
                     MSNQLVEVAITFDKKYSFGDLQTMLPQNLKKNWYWIGTASKKNTADFRIDQLFGFQGE
                     ALKVYEPDAELPAEAATWNPLTPMRKIAEQYNHYIGEYALVTDVKTFLDKFGKTDFSK
                     QEEIDKLEFAGIILTGKAEDFAQLEGKDWIYASSIGASIPIQPYYQLHQ"
     gene            24429..25625
                     /gene="tuf"
                     /locus_tag="U1041_000669"
     CDS             24429..25625
                     /gene="tuf"
                     /locus_tag="U1041_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014335040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEM4767796.1"
                     /translation="MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSSV
                     NQPKDYASIDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQM
                     DGAILVVASTDGPMPQTREHILLSRQVGVKHLIVFMNKVDLVDDEELLELVEMEIRDL
                     LSEYDFPGDDLPVIQGSALKALEGDTKYEDIVMELMNTVDEYIPEPERDTDKPLLLPV
                     EDVFSITGRGTVASGRIDRGTVRVNDEIEIVGLQEEKSKAVVTGVEMFRKQLDEGLAG
                     DNVGVLLRGVQRDEIERGQVISKPGSINPHTKFKGEVYILTKEEGGRHTPFFDNYRPQ
                     FYFRTTDVTGSIKLPEGTEMVMPGDNVTIDVELIHPIAVEQGTTFSIREGGRTVGSGM
                     VTEIEA"
     gene            25800..26552
                     /locus_tag="U1041_000670"
     CDS             25800..26552
                     /locus_tag="U1041_000670"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002985521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEM4767797.1"
                     /translation="MSRKPIIAGNWKMNKNPQEAQAFVEAIAGKLPAGDKIEAAIAAP
                     AVDLNALLWFAKDSELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDY
                     FHETDEDINKKAHAIFRNGLTPIICCGESLETYEAGKAVEFVGAQVSAALKDLTAEQV
                     ASLVIAYEPIWAIGTGKSATKDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVNPS
                     NVAEYMACPDVDGALVGGASLEAESFLALLNF"
BASE COUNT         7963 a         5075 c         5874 g         7688 t
ORIGIN      
        1 ttttagtact aggcaacgag ctgcaggcag tactggagta cggcaaagcg agttaacgca
       61 gtaataaaag ataaactgaa tgacgatatg acaatggcct ggctgtcaat gtcctctata
      121 cgctagaaga aggaggtaaa cgagcggtcg gtttcaaatt gtcagacggc attgacattc
      181 ccaaagaatt tgaaggcaaa ttcaagtttg cccgccaacg ctccaaactg gcaggcgaaa
      241 tccgtggcag cttctttgtt gtcaagggcg agtatttata ggatggcaaa tctggggaaa
      301 cccagatttt ttatataatg acttgactta gagttgactt caaggtgtat aataagcgaa
      361 aacaaagaaa ggagcctgga atgaatatca aagaagttag tgatgtaaca ggcctatcag
      421 cagataccat tcgctactat gagcggatag gacttattcc caaaattgca agaaaatctt
      481 ctggagtaag gaatttttcg gaaagtgatg tagccatttt ggaatttatc cgctgtttta
      541 ggagtgctgg tatgtctatt gagcgcttga ttgagtatat gggcttggtg caggcaggag
      601 atagtacagt ggaagctcgg attgatttat taaaagaaga gcaggaagaa ctgcggtcac
      661 gcttgtcgga aattcagcaa gctctaaatc gtttagatta taaaatagaa aattaccaga
      721 ctatattaag aggtgcagag aatcaattgt tcacagacgg cggtagttca ttcaaaaaag
      781 gcagaggata acttctctgc ctttatactt cattattcat ttttcttata acttgtttgg
      841 gtttaaattt cttctttagc ccaatttgaa ccaaacgtag tccaagaaaa cccgtcgcac
      901 ttgccaatat gatggcaaca aaaacaggaa tgcctacgga tagatagaca taactagcga
      961 tgactgttat caaactaaaa aatgcgatat taacaaaaaa caacaattcc tttagacgtt
     1021 ctttattggt attttttgcc tgataggttt gaaaattagc ctttttctct ttcgggatat
     1081 actcttcgta ctggtactca tgggactgat agtgtcttaa tgccatatcg tctccttctc
     1141 tgctccctaa agaataccat aacattgctg aatttttatg tcatttatat tacaataatg
     1201 ttacaagaga aaaattagaa aagtctgaac attaaaacac aggtagtcac ttatcagata
     1261 ttgctctttt tgatataatt atctttatgg aaaaaattat cattacagca acagctgaaa
     1321 gtattgagca ggtcaaagaa ctgcttgcag caggagttga ccgtatttat gttggggaag
     1381 aggaccatgc ccttcgcatc ccaacaaatt ttacctatga tgaactcagg gaaatagcag
     1441 agctagttca tagcgctggg aaggaattga cggtcgctgc caatgccctc atgcaccaag
     1501 atatgatgga caatatcaaa ccgtttatgg agctaatgag ggaaatcaag gttgattatc
     1561 tggttgtcgg agatactgga attttctata tcaataagcg tgatggctac aattttaagc
     1621 taatctatga cacatctgtc tttgtgactt ccagccgtca gattaacttt tggaaagatc
     1681 atggagcagt agaggctgtt ttggcaagag agattccatc agaagaactc tttgatattg
     1741 ctaagaactt ggaaatgcca gcggaaatct tggtctacgg cgcctctgtt attcaccatt
     1801 ctaaacgaac cttgttacag aattactaca attttacaaa ggctgatgaa acagacctat
     1861 cgcgtggacg tggacttttc ttagctgagc cgagcgaccc agatagccac tattctatct
     1921 ttgaggacaa gcacggtacc catatcttta tcaacaatga cattgatatg atgaccaagc
     1981 tatcagaatt agatgaacat ggttatcata attggaaact tgatggtatc tattgccctg
     2041 gtcagaactt tgttgaaatt gttaagcttt ttgttcaagc aagagatttg attgaaaaag
     2101 gcgacttcac ttatgatcag gccttccttt tggatgaaca ggtacgcaag ctccatccag
     2161 ctgaacgtgg cttggataca ggcttctacg aatttgaccg caataaggtt aaataacaat
     2221 atttatagta gaatttattt actttaacct ggcagagtta gctctgtcac ttactatgta
     2281 aggtcagagc acgaaaatgc ctttgggcga tattctaaac tctgcactag gtctccacat
     2341 gaaaaaatat cgtttcatgt ggaaaccgtc gcaaatagag gagattttac atgatgtcaa
     2401 aaacattaaa gcgtcccgag gtcttgtcac ctgctggaac tttggaaaaa ttaaaggttg
     2461 ctattgatta tggtgccgat gctgtctttg tcggcggtca ggcctacggt ctgcgtagcc
     2521 gagctggtaa ctttaccatg gacgagatgc gggaagggat tgaatatgcc catgcccgtg
     2581 gtgccaaggt ctatgtagct gccaacatgg tcacccacga aggcaatgaa gaaggagcag
     2641 gagcctggtt ccgcgaattg cgtgacatgg gcttggatgc cgttatcgta tctgacccag
     2701 ccctcattgt tatctgtgca accgaagcac caggccttga aatccacctg tctacccagg
     2761 cttcatcaac caactatgag accttcgagt tctggaagga attgggcttg actcgtgtcg
     2821 ttctggctcg cgaagtgacc atggaagaag tggctgaaat ccgcaaacgg acagacgttg
     2881 agattgaagc ctttgttcac ggagccatgt gtatctccta ctcaggccgc tgcgttctct
     2941 ccaaccacat gagcaaacgc gatgccaacc gtggcggatg ctcccagtct tgccgctgga
     3001 agtacaacct ctacgacctc ccatttggag aagaacgccg atcgattaaa ggggaaatcc
     3061 cagaggagtt ctccatgtct gcggtggaca tgtgtatgat cgaccatatt ccagacatga
     3121 ttgaaaatgg ggtcgatagc ctgaaaatcg aaggccgaat gaaatctgtc cactacgtgt
     3181 caaccgtaac caactgctac aaggctgcgg ttgatgccta tcttgaaagt cctgaaaaat
     3241 ttgaagctat caagcaagac ctgattgatg agatgtggaa ggttgcccaa cgggaattgg
     3301 cgacaggttt ctactacagc ccgccgagtg aaaatgagca actctttgga gctcgccgta
     3361 agattccaga atacaaattc atcgccgaag tagtggcttt tgacaaggaa accatgactg
     3421 caaccattcg tcagcgtaat gttatcaacg aaggtgacca agtagagttt tacggaccag
     3481 gtttccgtca ttttgaaacg actattcagg acttgcatga ttcaaatgga gaaaagattg
     3541 accgcgccaa caagccgatg gaactcttaa ctattaagct ggaccgtgaa atctatcctg
     3601 gtgacatgat ccgtgcctgc aaatcaggcc tcatcaacct ttaccaagaa gatgggcaat
     3661 ctctaactat tcgtgcataa acataaaaag gccgaaattt cagcctcaga acgtagataa
     3721 actcttaaaa acattgatat ttcggtgttt ctgagagttt ttaattttca acataaagaa
     3781 aaaagattga agaaaattgt ccagaatgga ctttttcttc aatctgcaag gccgaaattt
     3841 tagccttttg tttgttgttg agaagtcttg atgctatctg gaaccaaggt gacttttttg
     3901 atgtcctcga tttttataat gcttgtaacc tgacgtttga aatttttcat gataatccgt
     3961 tggcgatcgg tatcatattt cacaatgtca cctgtgaaac tacgatcacc atagatgaca
     4021 tggactgcag cttttttata taaagccagc tccaagttat tcttgatttc ttccttgcta
     4081 tctggctcaa tagacttagg agctttgcca tgttctaaaa agacggtgat ctgctcgaaa
     4141 ataacttcta aaaacctctt catagcataa tcctttcaaa cttgatataa ttatattatc
     4201 taatttttat aaaaatgaca agctttttcg aatagataag tgaggaggta acaaatggca
     4261 gaatttacat ttgaaatcga agaaaaactc ttggtcctat ctgaaaatga taagggctgg
     4321 accaaggaac tcaatcgtgt atcattcaat ggcgcaccag ccaagtatga tatccgtacc
     4381 tggagccctg accacactaa gatgggcaag gggatcacgc tcagcaatga agaattccaa
     4441 gttctcttgg atgcctttgc taataaataa atgaaagaag cctaggagaa aaaggcttct
     4501 tttttggtga taggttgcaa taggcggtgg catagtgtaa caatgaaaat tttgaccaag
     4561 tctggtagga taaatggaag gactgtccag gctaaggtat ctgaccagct cgctcctgaa
     4621 acaagcttaa agaccaaaca gcctataagg aagcaacttg cagttcctag taggcaggct
     4681 agaaaaattg tgactggtga ggagtctgat ttagtgaggg cagaagtgat gatagtgtag
     4741 agtagaaacc cccatagaaa gccagatgtc ggtcctgtga gtgcagcaaa gccaccagaa
     4801 aaaccagcaa aaacaggtaa gccgatagcg ccaagaacta gatataagct gacacttgta
     4861 attgcctcct tgggtttgta tagacaagct actaagccga tagctagggt ttgtaatgta
     4921 aatggtacag gtccgataga cagactgatt tgtgaaaggg tggaaattaa ggctgttcca
     4981 atagcgatat aaacaagtga tttaatagaa gttcttttca tttgttatcc tcttaaaatt
     5041 ttatggttaa caaaaattat agtgagattg gataagaaag tcaatgctct ttcatcggat
     5101 gtaacaactc tataagtgat ttttataaca gctaataaga aacttatata gtaaaaaaca
     5161 acaaattata tgtgaaacaa cctatactta tgctagaata ataaaaaaag aaagtgagaa
     5221 tttctatgac agaattactt gatatttacc gtactcttaa atctaaaact tgggtagact
     5281 tgactcacca aatcaatgaa aagagcccgc atttccctgc gctaccagct ctcgaaaaga
     5341 aagccctatt tactcataag gatggcttct ttgtcgaaca atttacggtt gtggggcagt
     5401 acggaaccca tattgatcct ccgattcatt ttgtagaagg agctcgttat cttgatgaga
     5461 ttgagttgaa agatttactc ctgccactct acgttattga taaatcatct gctgttatag
     5521 caaataatga ctacgagata actaagcagg atattttaga ctttgaggct gaatatggtc
     5581 cgattgcgcc agaatctttt gttgcctttc gttcggattg gtcaaagcgc tggcccagtc
     5641 aagatgccat tcgtaatcta gacgaagatg gagttcaacg tacaccagga tggagtcatg
     5701 aagctctaga atatttgatt gaagaacgtc aggtgaaagc agttggccat gaaacattgg
     5761 ataccgattc aggagtatct gcagccaaac acggaggaag tttaccagaa gaatactatc
     5821 tcctatcaaa agatatttat cagttggaag tattggcaaa cttggatcag gtaccgccaa
     5881 caggtgcatt gatttcaatc gcttttcctc attgggagaa ggcttcgggt tcaccagtgc
     5941 gagcaattgc tatattacca taagaaaaag tccagacagt gctgactttc atgtctggac
     6001 tttttcaatt gagttaacgc atagtaacaa attcttcaga acctgtcgga tggatggcga
     6061 caacggcatc aaattcttct tttgtagctc ccattttgat agcaactgag aatccttgaa
     6121 tcatttcatc gacaccatag ccaatgccgt gcagtccaac gactttttca ttttctccca
     6181 cagttactaa tttaaactta gccatttggc gattgttttc tagggcagtg tacatagaag
     6241 taaaggctga agtatagact tttacattgt cctgaccgta ttgggcaatc gcttcgtcct
     6301 ctgttagacc aacggttccg atagcggggt gagaaaagac gacagttggg atggttgtgt
     6361 aatccatttt tgcggttggt ttattgttaa ataaacgttc tgccaaaagg cgacctgcct
     6421 tgattgcaac gggtgttaat tctttttcac cagtcacatc accgagggca tagatgcctg
     6481 gtacagctgt ttcttggtat tcattgacag aaatatgtcc tgaagaagta agttgaacac
     6541 tagttgcttc taggttgagt ttgtcaatat ttggtttacg tccaattgcc caaaggacct
     6601 tctgagcaat atggttacta ccgtcagcaa agttaatctg gatttgtcca tcatcagttt
     6661 tttcaagact gacaggagtt ttcccagtat ggagtggaag gttggtacgt tgcatttctt
     6721 ccatcaaggc atcaacaatg taggtatcaa agctacgaag agggcgattt ccacgaacaa
     6781 agaggtcagt ttggacaccg agtccatgta ggagaccagc catttctaca gcgatataac
     6841 cagcaccaat cacagccaca gaagaaggta attcttccca tgcaaagaca tcgtcagata
     6901 caatccctag ctcactacca ggaatagcag ggactaccgg tttggcgcca gttgcgatga
     6961 caatgtgttt tgcacgaatc agctcaccat tgacttcaac tgtttgatta tccacaaaac
     7021 gtgcgaaacc ctggataact tctactccgt tattgttaaa agtattaccg taggatgcgc
     7081 gtgaacgctc aatataggct tcgcgatttt tacgcaaggt ggcaaaatca aattttacat
     7141 cctggctggt aaaaccatac tcaggtccat agtggtgaat ggcttcagct acttgagaac
     7201 cgtaccacat gattttttta ggaacacagc caaggttaac acaggttccg ccaaggtggc
     7261 ttccttcgat cacagcagcc ttagccccat agatagcagc acggttcata gtagcaatac
     7321 cgccgctgcc tccaccaatg gcaataatat caaattcttt catgagtttt tctcctctaa
     7381 atgataatta tcttcattct atcgtttttt tacttatcaa tcaaaaatcc gctacgttct
     7441 cttacaaaat tgtaagtagg aaaaataccg aactttttgt aaaatgatta agaaaacact
     7501 tgcaaaaaaa cgtgtattcg tgtattataa agacaataca aaataaatat gttttgaatt
     7561 agaaaaggag tatcatatgt taaagacaaa gaaagctaaa attgctttgt tcagtggtct
     7621 cagtgttgcg gctgtcgcct taattggtgg tgccttggta tttggaggtg tattaggtgg
     7681 ttcctcacca acttctacag agaaagttgc gaccagtttg acctatacag tagctaaaga
     7741 gggatcgatt gcttcatcga ccttattgac aggaacgatt tctgcagcag atgaacaata
     7801 tgtttactac gatccttcaa aaggagattt gagcgaggtc ttagttgagc caggaactca
     7861 ggttgaagta ggaacgccat taattcgcta tgatgctaca gaattacagt ctgctttgga
     7921 tactgctgtt cgtgggcgtg ataagattgg acgtcagatt tatgatttga gaaacaatgg
     7981 tcagactgtt caaacaacgg gtgatgctgc aacagatgaa gcggcaacag ctgcagctca
     8041 acgttcagta gatatgcagt tggcagactt gaatgattcg tacgcagatg cacaagctgc
     8101 tgtggataaa gcgtatacag ccttgcaaga agctacagtt acaagtgcag tagctggtac
     8161 ggttgttgaa gtaaataaat cagtttcgaa gagttcaact tctagtcaga ccgttgttca
     8221 tatcgtcaac caaggtagcc tacaagtgac aggaaatttg acggaatatg atttggcaaa
     8281 tattgcagtt gaccaagaag tgaaattgac tagcaaagta tatccagata agtcatggac
     8341 aggtaaaatc acctatattt ccaactatcc ctcaactgaa caaactgcta gtgtagcaac
     8401 aggaactagt ggtggttcag gtgccaagta tcctttcaaa gcagccttga ctagtgaatt
     8461 aggcgaattg aaacaaggtt ttactgtgaa tattgaagtg gtcaatacta ccaaccatat
     8521 tttaattcca gtaacagcag ttgtgccaga aggtgataaa aactttgtat ggacaattgt
     8581 ggaagggaag gctaaaaaag tagaggttac ccttggaaat gcagatgctc tcaatcaaga
     8641 ggtgacagca ggtattgcag caggagatca ggtcattact attccaactc cagaccttga
     8701 agaaggaaaa gaggttgaag cctatgaaga accagctaat tagattaacc aatataaaca
     8761 aatcctataa aaacggtgac caagaacttc gtgtccttaa agatatagat ctcgaggtgg
     8821 aagaaggaga atttctagcc attatgggac cttcaggttc agggaaatca accttgatga
     8881 atattatcgg tctccttgat cggtcaacaa caggaaatta ttggttggaa ggtgaagaag
     8941 tcagtcaact gtctgagaag aaattagctt ccgttcgtaa tgaccaaatt ggtttcgtct
     9001 tccaacaatt cttcttgctc tccaaactca atgctcttca aaatgtcgag ttacctttga
     9061 tttatgcagg agttccagcc aatcaacgga aaaaattagc taaacgttat ttggaaaaag
     9121 tggagttggc tgagcggatg actcacctgc catctgagct atcaggtgga cagaaacaaa
     9181 gggtggctat tgcgcgtgcc ttggtcaata caccagctat tatcttggcg gatgagccaa
     9241 caggtgcctt ggataccaag acaggcgagc agattatgga actcttgaca gagttgaata
     9301 atgaaggaaa aaccattatc atggttacac atgagcctga gattgctgcc tatgccaaac
     9361 gtaaaatagt cttgcgtgat ggtgtcatta cagaagatag tagaagggag gaggtataga
     9421 tggaaaactg gaaatttgcc ctcaagtcta tcctagccca taagatgcgt tctcttttga
     9481 ctatgttagg tattatcatc ggtgtggcct ctgttgtgat cattgtagca atgggaacag
     9541 gtatgtctaa gagtattgaa aagtctctgg ctggtgatca gaataatgtt caggtttatt
     9601 ttacacctta tattcctgtt gaaggtgcag gtacaaccgg gatttttggc agtattggtg
     9661 gcggtgaaat gtcaatggaa gaagagccag atttaacgga ttctatgttg aaagggcttt
     9721 tggaaatcga tgggctcagt ggctactaca ttagtgcttc aagtacctct actgtagcag
     9781 cgggcaatgc gcaagctgat aatgtcttta ttactggtgt tagtcaatcc tattttgaca
     9841 taaaggcatt agaaatcttg gctggccgtc gttttactgc taacgattac agccgatttt
     9901 cccgtattat catgttggat gttgccttgg ctgagaagct ttttggttca accgatgcag
     9961 ccctcaacca aatcgtcagt gtcaatgcca attcttacct tgtagttggt gtttacaaag
    10021 atcccaaagc aggtacttcc ctctatggtt tcaactcagg cggaaatgcc attatgacca
    10081 atacgcaact agctgctgaa atgggtacca aggaaaatag tgggctctat gtccatgtag
    10141 aagatgtgag tagagctgct gaggttggtc aggctgccgc agcatacttg accaacatta
    10201 caggtctaaa ggaagcccgt tatgatatct atgatatgtc agctatgtta gatgatttta
    10261 agaaccaaat gtcaggtgtc actacgttta tcggtgctgt tgcaggaatt tcacttcttg
    10321 taggtggtat cggtgttatg aacatcatgt tggtatctgt gactgagcgg acacgtgaaa
    10381 tcggtcttcg taaagctctg ggggcaaccc gaggaaatat cttgatgcag ttcttgattg
    10441 aagctatggt cttgaccact ttaggtggag caatcggttt agctatcgct caagccattg
    10501 tgtttattct caacgccaca aaggttatgg gagagatgac agctgaaata tcaataccgg
    10561 ttgtattagg aagtttagcc ttttcagcag cagtcggaat tgtcttcggc gttcttcctg
    10621 ctaataaggc ttctaagctt gatccaattg aggcattacg ttacgaataa ttgattgaaa
    10681 cgattaggtt ttcctagtcg ttttcttttt tgagcaaatg ccttgacaat atcactaatt
    10741 agtaataaaa taagaccatc aaataagtaa gagatgtaaa ggagaacaca tcatggtaga
    10801 attaggtatt tcaacatttg gcgaaacaac tccactagaa aaaacagggg agacttacag
    10861 ccacgacgag cggattcgtc agctagtcaa agaaatcgaa ctagcagatg cggtggggct
    10921 tgatgtctat gggattgggg aacatcaccg aaaagatttt gcggtttctg cacctgagat
    10981 tgtgctggca gctggtgccg tcaataccaa gcatatcaag ttaacatcag cagtttctat
    11041 cctttcctcc atggatcctg tgagacttta ccagcagtac accaccattg atgctttgtc
    11101 aaatggcaga gcggaaatca tggcgggtcg tggttccttt accgagtcat tccccttgtt
    11161 tggttatgat ctccatgact atgaagaact cttcgatgaa aagttggata tgcttctgga
    11221 aatcgacaag gaaaccaatc tcaagtggga tgggcatttt acccagtcag tcgataataa
    11281 gccagtctat ccacgtcctg ttcaggaaga ttttccgatc tgggttgcaa ctgggggcaa
    11341 tgtagagtcc accatcaaga ttgctaagaa aggcctgcca atcgtgtatg cagtcattgg
    11401 tgcaggtgcc catcgcttta aacctttagt cgatgcttat cgcaaggttg ctcgcaactc
    11461 aggtcatgat ccaaagaaaa cgaaagttgc agcccattct tggggttgga ttgcagacga
    11521 ccatgacaag gctgtggaag aatactatca tccaaccaaa gtaattacgg acaatattgc
    11581 caaagaccgc ccacattgga gcgagatgac caaggcgcaa tatctctact ctctgacaga
    11641 cgaaggagca accatcgtcg gagatccaaa acgagtcgct gaaaaaatta tcaagactat
    11701 tgaaacactt gacttggacc gtttcttcct ccatctccca atcggatcaa tgccacatga
    11761 agatgtcctc cgtgctatcg aactctacgg aaaagaagtt gcgccaattg tccgagaata
    11821 ctttgctaag aaagaagaaa atcagtccca agactgatga gatagttgat aggatgagct
    11881 atactatagt caatcctaaa tatttttcat aatctcctga aaatcctgac catgtggttg
    11941 ggattttttg catgcaaaaa cactcttgga atttccaaga gtgttttacg tatcggtgtt
    12001 aaacagtttg taatttttat ttcatcatag ggagtgaaaa ggtctagtag accttttcag
    12061 ccaatcgcca agaaactgga gagcgattgg tacattctag tgaaaacaat cctagcaagc
    12121 tactcttgct tacttcatag tcggaaatag gagtacatcc cgaatagtag tggtatctgt
    12181 caggagcatg cagaggcggt cgataccgat tccaagtcca cctgttggtg gcataccgta
    12241 ttcgagggct tcgatgtagt cgtagtcaac gcctgtcgct tcgtcgtcac cgagttcttt
    12301 agccttggct tgggcttcaa agcgttccaa ttggtcgatt gggtcgttta attctgtaaa
    12361 ggcgtttccg tattccttgg tcatgatgaa gagctcgaag cggtctgtga agcgtgggtc
    12421 ttcatcgttt ttcttagcca gtggagatac ggctactggg tgaccataga cgaaggttgg
    12481 ttggataaga gttgcttcaa catactcttc aaagaagctg ttgatgattt gaccaacttc
    12541 tgtatggtgt ttttccacag ggaccttgtg ctcagctgca agggcttttg cttcctcgaa
    12601 gctcatctct tgccagaagt ccacgccagt ttgttcctta atggcatcaa ccatgtggat
    12661 ccgtttgaac ggttcgtgga tattgatgac agtatcctgg taggttacag ggccatcgcc
    12721 gacaacagcc ttggcagtgt gctggataat accttcggtc aagtccatga tgtcttggta
    12781 gtctgcataa gcttggtaaa cctcaatgga agtgaactca gggttgtggg tcgcatccat
    12841 accttcgtta cggaagatac ggccgatttc ataaacgcgt tccataccgc cgacaatcag
    12901 gcgtttgagg tgaagttcgg tcgcgatacg aagcaccatg tcaatgtttt gggcattgtg
    12961 gtgggtgatg aatggacgag cagcagcacc accagcttca ttgtgaagga caggtgtttc
    13021 cacttccaag aaaccaagtc cgtcaaggta acggcggatt tctgagatga tttttgagcg
    13081 ggtcacaaag cgatcaaagc tctcgcggtt ggtaatcaag tctaaataac gtttgcggta
    13141 gcgggtctcg atgtctgtca aaccgtggaa tttttctggc aatgggcgga gcgctttaga
    13201 caggtgggtc aacttgcgag cgtggataga caactcacca acgtttgtct tgaagacatc
    13261 tccctcgaca ccgataaagt caccaaggtc tgcttttttg aagatttcat agttttcttc
    13321 gccaacatca tccttacgaa cgtagatttg aatttgacct tcgcggtctt gaatgtgagc
    13381 aaaacctgct ttacccttac cacgcttggt cataatacga cctgcgatga tagccgtttg
    13441 tcccaattct tccaagtctt ctttcgattt gtcttcgtac tgggacttca attcagctga
    13501 gttggcagaa cgctcaaaac gtttaccgaa agggtcaatg ccctgttcag caagagccgt
    13561 cattttttca cgacggacaa tctgttggtc atttaattct tcaaaatgtt cagttgacat
    13621 aaaaatttta ttcctccaaa gtctgttatt tctattttat catagaatag ggaaaaaatc
    13681 agcaaaaaag aaagcaggaa actgctttct tagtgagatt tatagcgagt atcattccaa
    13741 gttagttcgg taaagtgttc aaagtcggtc gtttccaaaa tggaaacgga agcattgtcc
    13801 aaaccgcctc ggtgacgaag ttggtcgaga ggaaagccca gcagtcgatg aatggaagcg
    13861 gttaggatag ctccgtggct gacaataagg actgtttcca tgtcttgccc tttcagcgat
    13921 tggacaaagt ccaccattcg ttgagttact tggcgaacgc tctcagcttc aaataagtca
    13981 ttgttaaaaa gtgctagatt atgtttgagt gcccaggctt gtttggggta gatggcacga
    14041 aaaattgcta tcttgcttcc ttctaacgtt ccaaaattcc attcacgtaa ttgttgtgtg
    14101 gttagaacgg tttggcaatg gtgattggct tttgcaattt ctacggcagt gctatgtgcg
    14161 cgctgcaaat cactagaata aatagcatca aaggggattt cagcaaggta tttgcctagt
    14221 ttttctaaat cctgataaga ttcaggcaaa agagctgaat caccagaata gccttgaaag
    14281 cgcccctcca aattccattc ggttttaccg tgacggacaa agtagatttt caagtctaat
    14341 ctctcccttc aatcaaatcg gcaaagtcag cttttacaaa atcagctaaa acctggctat
    14401 cgattttaat cgagcgacca atttcaccag cagagacaat caagtgaccg agttcaaggg
    14461 cagattgatc aatgtagatt gggaaattat gcttctgacg aatgcccacg ggattgttgg
    14521 caccgtggac gtagccagtt gtcttttcca agtctttttg tggaatcatg ctgacttttt
    14581 tattgcctga gatcttggct aattttttct cagacaggtg ttctgtgatt ggaacaatgc
    14641 cgataattgg tccagtttta tctcctgtca atgccagcgt tttgtaaatt tcgtgttctt
    14701 caattcctgg tggcaattgg ccatcaaggg catttaaaac aaggctatca tgattgatct
    14761 tagccttgtc caatatttgg tccaccaagg ttttctttat tttaaccttt tttgccatta
    14821 tttatatttt tcctcaagtt tactcatcca aagccctaac catgctccta gtataaatag
    14881 gacaatagca gcaatccatg taacaaagtc agctccagca taggaaattg actctttatt
    14941 acttgcctgt ggaatcaaaa tcagaagagt ggatgatgag acgacaccaa taataaagtg
    15001 ataaacacgt gaatggtata ctttcagagc gtggtccatt gcttttgaaa atgcaaccat
    15061 tgcaagaacg ccaccgattg cgattggtag gaaggtaccg aatagatcaa gtgatttgaa
    15121 accatttagc attggcgtgt agatacccaa aatcaatagt aagtttgaag ggctgagtcc
    15181 aggaacaagt acccctaaag caatcaaggc acctgccaat acaaaactag taaaagtagc
    15241 tggaagtgtc ccgacaagat cgcttaaatt gtaaagtagg agaccagaaa tgatgaatgt
    15301 cccaatcaac caagccaaat caatgctatc tcgtttgctc ttttgagttg attctttaag
    15361 taggctagga atagttccca cgattgctcc cgcaaatgcc cacaaaactg ggacttggaa
    15421 atgttgcaat aaaaattcta cagggaaaga gaaaagtgcg attcccaaaa ttccaccaat
    15481 tcctacagga acaaaataaa gaaagttttc cttgaaatct tttcgaatat ttgctaaaaa
    15541 tccaattagt cgctcataga ttccgaggat agcagcgagt acccccccag agacaccagg
    15601 taagataaag ccgagtgcga taatcatacc tttaataatt cttgaaatcc aagaagccat
    15661 aatttcctcc aaaatgtatt ataacgttcc tattatagca taaagcaagt aaaaataatt
    15721 aaaaagactg cctgttagat aaaatccagc aggcagtttg gttaaagatt gtaaaaacct
    15781 ggtcttgctc tatagagtaa aatgagcaga atagaggcaa ttgcagtgga aggaagaata
    15841 tagctgatat tgtaggtaaa ggaatagaac cagacagggg taccagttgg ggcgtagtct
    15901 gcgtagaaaa taattcctga taagaaggta gctaccaatc ggatgcttcc tcctagaaaa
    15961 ctagccagag taatgatgag ggtagcattt tttagatttt tttgtttgga tagggtgggt
    16021 gccactaaac ctgctaaacc aattccggcg taagaaagtg cgtagtcaag aaaaacttga
    16081 aaaacgttta ggaagtagcc accgtagaaa agttgaatgg ttcctacaat accaccagta
    16141 agaaccccca cccctagtcc gtggcgcaga gcaagcagta agattggaag catgactaaa
    16201 gacacagatc caccttgggg cattgtaaag agcgggattt tgtcaaagac gagggcaatg
    16261 gcagaaaaga tagcaacttc ggctaggatg ggtaattttg atgtggacat aaaaagactc
    16321 ctttgtagat ggtcaacaaa ggagtgttta tagcagagta tagtatcatt ctataaagca
    16381 cacaattcct acgctagttt taactagatc aggttcgagg atttcgcagt tgcgatctca
    16441 gccgaagcac tcctttgtgt atatgtaatt ggtgggatta taacatttta ttcaggtgtt
    16501 gtaaatagtt tctgataaac ttcattagga tccttcaggg tagtaataat gttgaggtct
    16561 aggtggtgct caaagccgtt tacataacca cgtgaggtat attggtgaag atcgtagtcc
    16621 aagtcagtat ttggagcggc attgtagtag ccagaatcat caccgtatgt aggaatccaa
    16681 atggcgtcaa atttatccac atttatgctg tggtcttcca tgaaataggt tccgacgtaa
    16741 attccaatgt ttttagcacc gagagtttct aactcttttc gaaaagcctc cactccagca
    16801 ttcatatcat ccatggtata ttcttcaacg tctaaccaat agaaggttgg cttgtactta
    16861 tttgcggcct tataaaagct ttgagcttcc tcctgcatgc tctcaatgct atttcctgtg
    16921 acataggcat agacagcaac aggtatattt cttgcctgga attctttaat atgggtatca
    16981 aaggatttat ctaacccatt tttatcagtc gctgtatttt cgtttttagt gtgtgagcca
    17041 ctttgaatac gaacgattgc gccagaaata tttttgctaa gtgtatcgta gtcaatttca
    17101 gacggtctct gccaagcaga aacgtcgacg ataggtttca tttcgagcgc atttgcaatg
    17161 taataacttg aactagaatt tgttgtttta gaacttgtac tggtgtttga ttgtgtgact
    17221 gcgggttcat tagctacctc cgtcttattc acagtatttc cagtcacccc agtgatgaaa
    17281 ataagagcaa agaaggatag gaaaaaaaca acaacaatca tcggatttag tttctttctc
    17341 atctcatcaa ttctaccgta aaatcatgaa aaaatcaaaa aaatacgatt caagaaatag
    17401 taaaggggac ctctaaaaac tcccaaaatt gcgaatttgg agttacaaaa accttgttaa
    17461 atcaacattt taaattttag aaaattagtt tttagaggtc ccctaaaaga ttatctgaac
    17521 ttgacataat aaagggaata gggtaggcta aattggtatg catgataaaa gtgaaaaagt
    17581 aagacgtgtt agtcagctag ttgttctgtc ctctttgacg attgttttaa gggtggtttt
    17641 tgggccattt cccaatataa agcctctcac agctattttc ctcattgttt tgtcctattt
    17701 cagtttgctg gagagctgga tattgatgat actagtgatg gtagggagtg gcttgctatt
    17761 tggatttggc acagttgttt tgtggcaagt tcttagtttt gcttttatcc aatttatatg
    17821 gtggttggca atcggtcctt ttatcaaaaa agagaacatt cccttgtggc tacagagtct
    17881 tctggcgggg attcttgtct ttttgtatgg gctaacgata agttttttat ctgctacaca
    17941 gtttgggact tcccctatcg tcttctggct taatggtcta gtctttgatg gtttacacgc
    18001 tgcttcaaca gttttgtttt atccaattat tgattatatt tttaggagat tttataaatg
    18061 aaaaaaatta gtattatgtt gatggttgtc ttctcgctct tcttggctgc ttgtacaaac
    18121 actactgaga aacagagcaa cttggctatc gaagtcactt tgcagattac aaccaaggac
    18181 aaagagaatc gtcaggaagt cactgcggaa gaaggtgata gtgtcatgga tgtacttaaa
    18241 gaacaccatg acattgtaga agacaatggt ttgataacag aaatcgatgg tgttagccaa
    18301 gatacgagta ccaatacata ctggatgtat aaagttaatg gccaaatggc tgataaaggg
    18361 gcgaaagacc ttacagttgc gaatggggat gaaattgaat tttatcttga aacatttgaa
    18421 tagatatgaa aggcttcggc ctttttcttg tcgacaaaag ttagttccga atgtttgcag
    18481 agcaacttag aaagtgataa gtatttttat acaaagtatg ctataataag agctatactc
    18541 gaagaaggtt ggataagcaa tgaagattga caaacgccag ttgttgaatt actccatact
    18601 gattccctat ctcatcttat cggtgattgg gttggtcatg gtctattcga caaccagtgc
    18661 tacgcaaatt attaatggta gaaatccatt tagaacagtg attaaccagg caggattctg
    18721 gattgtcagc ttggtagcaa tctatacgat ttatcgtatg aaattaagtt ttttacgcaa
    18781 gaaagccgtt atctattcgg ttattttggt agaagtattt ctgttggcta tttctcggtt
    18841 gtttcctccg attaaggggg ctcatggctg gattcctctg ccaatcgcag gaaccttgca
    18901 gccggcagaa tatttgaaat taattatcat ttggtatctg gcacatgagt ttgcaaaaca
    18961 acaggcggat attcgaactt atgactatgt atcgttgatt aaaggaagtt ggattccgaa
    19021 agagtttaca gattggcggg tggtcagtct gctcctcctt ggtctagttg cgacactgcc
    19081 agacttggga aatgcgacga ttattgtgct gattatggtc gtgatgatta gtgtgagtgg
    19141 gattgcctat cgctggtttt caacagcggt tttgggaatt gtagccgcct caacagttat
    19201 tttagggacg attcgtattt tgggtgtaga aacggtggaa aaaattccgc tctttggtta
    19261 tattgctcgt cgattcgcgg cctattttga tccatttggt aatgccacca actcaggtct
    19321 tcaattgact cattcttact atgcgatgag taacggtgga tggcttggac gtggcttggg
    19381 aaattcgatt gagaaaaagg ggtatctacc agaggcccac aacgactttg cgttttcgat
    19441 tgtcattgaa gagctcggtt ttgtcggagc tagtttaatt ctagccatat tgttcttttt
    19501 gattattcga attattattg taggcgtccg tgctcgtagt ccatttaatg cgatgatggc
    19561 acttggaatg gctggtatgc ttctgattca aacatttgtc aatatcggag gaatttcagg
    19621 aattattcct gcaacggggg taactttccc cttcttgtca cagggtggat cgagtctttt
    19681 gattatttcc atcgggatag ggtttgtttt gaatattgat gctagtgaaa aacgtcgatt
    19741 aattgaagaa gaaatagagc gtacgctaat ttagagatag gaaagaggta ggagatggct
    19801 attcaaaaat tagaaaacta taacaacaag gaagcaatcc gtgaagaagt aacgattcta
    19861 acatctattt tggaagaagt agcagcccaa atgatgcctg cagagacctt tgctaaaatt
    19921 gtagaattat ctcaattgtc tcgtcaggat gattatcagg cattgattgc tattatcagt
    19981 cagttgaata atgatgaact agcagttatt tctagatact ttgctgtttt gccacttttg
    20041 attaatatat cagaagatgt tgacttggcc tatgaaatca accatcaaaa caatattgat
    20101 caagattatc ttggtaagat ttcaacaaca attgatatgg tttccaaaca agaaaatgca
    20161 gctgaaatcc ttgaaaagtt gaatgttgtt ccagtcttga cagcccatcc tactcaggtt
    20221 caacgccagt ctatgctgga tttaaccaag catattcatg agttgcttcg tcgttatcgc
    20281 gatgtaaaat tgggcttgct caataaaaac aaatgggaag atgagctccg ttgttacatt
    20341 gaaattatca tgcagacgga tatgattcgt gagaagaagt tgaaggtaac caacgaaatc
    20401 acaaacgtta tggagtatta caattcttcc tttattaagg ctgtcactaa gttgcagcgg
    20461 gaatacaaac gtttggccgc tgagaaagga atcgtcttaa ataatcctcg tccaattaca
    20521 atgggtatgt ggattggggg agaccgtgat ggaaatccat ttgttactgc agagaccttg
    20581 aagctgtcag ccttgactca gtgtgaagtt attatgaatt attacgatga gcaactctat
    20641 aaactctatc ggaatttttc gctctcgact tccattgtaa atgtatctac agcggttaag
    20701 atgctggcgg atttatctga agatagttct gtctaccgtg aaaatgagcc ttatcgtcgt
    20761 gcttttcact atattcagat gaaacttgca aatacaagag attatctagt tcacaataag
    20821 ccgtcagctg tccgctatag taatgtagcc gagtttaaag ctgatttatt agccatcaaa
    20881 caatctttga ttgaaaataa atctatggcg ctattgaaag gtgattttac agaattgctt
    20941 gaagcggttg aagcgtttgg tttctaccta gctagtatcg atatgcgcca agactcttct
    21001 attcatgaag caagtgttgc ggagctattg gcttctgccc gtatcgtaga agactactcc
    21061 agtttatctg aggaagctaa atgccatgtt cttttgaaac agttggaaac agatccacgc
    21121 attctttctg caacgcacgt accaaagtca gaacaattag aaaaagaatt ggccatcttt
    21181 gctgctgcgc gtgaattgaa agataagcta ggtgaggaaa tcatcaagca acatattatt
    21241 tcacactcgg agagtgtttc tgatttgctg gaattagctg tcctattaaa agaagttggt
    21301 ctagtagatg tcgataaggc ccgtgttcag attgttccac tttttgagac aatcgaggac
    21361 ttagataatg cacctgatac catgcgtcaa tatctgcaat tagatttagc gaaacgttgg
    21421 attgcaggca ataaatacta ccaagaaatc atgcttggct actcagattc caacaaggat
    21481 ggtggctacc tatcctcagg ctggacactc tacaaagcac agaatgaatt gacgcaaatt
    21541 ggtcaagact acggagtaaa catcaccttc ttccacggtc gtggagggac tgttggtcgt
    21601 ggtggtggtc cttcctacga tgcgattaca tctcagccat ttggttctat caaggaccgg
    21661 attcgtttga cagaacaagg cgaagtgata ggcaataaat acggtaacaa agacgcagcc
    21721 tactataatt tagaaatgct ggtatctgca acgcttgacc gtatggtcac acaaatgatt
    21781 accgatccaa atgaaatcga tggctatcgc gaaaccatgg atgaaattgt atcagatagc
    21841 tatcgtatat atagagatct tgtgttcaat aatccacatt tttatgatta tttctttgcc
    21901 gctagtccaa ttcgtgaagt atcaagcctg aacattggct cacgtccagc ggctcgaaaa
    21961 accatcacag aaatcggtgg tttgcgtgcg attccatggg tattctcctg gtcacaaaac
    22021 cgtgtcatgt tgccaggttg gtatggagtt ggttcaagtt tcaaacgctt tattgataag
    22081 caccctgata atttgtctaa gttacaaaaa atgtacgaat cttggccatt cttccgttca
    22141 cttctatcaa acgtggatat ggtattgtct aaatccaata tgaatatcgc atttgaatat
    22201 gctaaaatgt gtgaaagcga agaggtacga aatatcttcc atgtcatttt agatgaatgg
    22261 cagttgacca aagaaattat tttgtcaatc gagcaaaatg atgagctttt agcagaacta
    22321 ccgttcctaa aagctagtct tgattatcgc atgccttatt tcaatgtgct caactatatt
    22381 cagattgaat taattaaccg ccttcgtcgt ggagaactca gcaaggaaca agaaaacctc
    22441 atccacatca ccatcaacgg tgtggcaaca ggtttgcgaa attctggtta atcttattta
    22501 agcaacttct tcggaggttg cttttttaat acggtaaagg atataatatt ttaaaaaaat
    22561 gtgtaaccaa atagaattct attcgttata ttagtgaaag gaggagatga gcatcaaatt
    22621 ggatgaatat gaaaaagaag tcatcggcat tgccgaggag atttcctact acctgcaaaa
    22681 atcaggcgcc acatttgcag acagccagga tatagcccag gatgtactag tcaaattgct
    22741 tgaatctgat attgtccttc ctttcgaaaa actaagagct tggctttacc gttctgcagt
    22801 tcgggcttac attgacaaat acaggcgaga caagcgctac catgaaattc tacaaaagga
    22861 gttttttaga agagaagacc ttttggtcta tgaccaagaa ggttatgagg aactctatca
    22921 agcagttgca gacctgccag aaaaatacca gcaagtgatt gacctctatt attttcaaga
    22981 tatgagtgtc aaagaagttg cccatatctt agggactggt caaagttggg tgaaaattat
    23041 cctttaccgc ggacgcaagc agttgaggaa aatactagaa gagagaggat acgactatga
    23101 agacttttga agaagtgaca aaaaagagta agcggaaaaa tttatggaag acagttgggc
    23161 tatctatatt agggctcttg ctgataacgg gagcgacctt gaagaccttg cagattttga
    23221 ctgccaataa tggtgaaaaa atctatcaag aacacgaatt attgtcacaa gttgcctatc
    23281 caaacattga atactcaacc tactattata aagcgacctc tctatttgct ggagctgtcc
    23341 atgcagatcg ccacaaagac ttggcagggg ttccagttgc ctttggtgac tatgaatacc
    23401 actatgattg gttgggaacg tatttgaact tttctcagga tgaaccttct tataagggag
    23461 aaattgccta tgatcgtcaa acctggtcaa aactccctct cttctataat acggagaaag
    23521 ttgacacaga tgactttgca actgttccca gtcaagaact ttctctagtg aaaaacatgt
    23581 ccaatcagct agtagaagta gccatcactt ttgataaaaa atatagtttt ggagacttgc
    23641 agaccatgct tcctcaaaat ttaaaaaaga attggtactg gatcggaaca gcttctaaga
    23701 agaacacagc tgattttcgc attgatcagt tgtttggttt tcaaggagag gctctaaagg
    23761 tttatgaacc agatgctgaa ttaccagcgg aggcagcgac atggaatcct ttaacaccga
    23821 tgagaaaaat agcagaacaa tataatcatt atatagggga atacgcactc gttacagatg
    23881 tcaaaacttt cttggacaaa tttgggaaaa cggacttctc taaacaagaa gagattgata
    23941 agctagaatt tgcaggcatt atcctaacag ggaaggcaga agactttgct cagttggaag
    24001 gcaaggactg gatttatgct tctagtattg gcgcgtccat tcctattcag ccctattatc
    24061 aactgcatca gtaagtgaaa agagtcaata tattttctac acctatagca agaggcttgc
    24121 cagggagtcg taggatgact gaatggagaa aggtctgttg cagtagtctc gtatttgtgg
    24181 caccttgtag ttatggtaac atcaatatcc ctatggaagt gaggtgtttt tagttgagta
    24241 ataggttaaa atgggatgat aaaaaagtta taagcgaagc taatagccct tgcagaaaat
    24301 ggataaaata aaaaacgata gaaaatgctt gcaattctgc cacaatttga tagaatagta
    24361 aggtaaagtt agactgtatt gcctactgtc tatctataaa atatatttta ttggaggctt
    24421 ttaccaaaat ggcaaaagaa aaatacgatc gtagtaaacc ccacgttaac attggtacaa
    24481 ttggacacgt tgaccacggt aaaactactt tgacagcagc tatcacaact gtattggcac
    24541 gtcgcttgcc ttcatcagtt aaccaaccta aagactatgc gtctatcgat gctgctccag
    24601 aagagcgcga gcgcggtatc actatcaaca ctgcacacgt tgagtatgaa actgaaaaac
    24661 gtcactatgc tcacatcgac gctccaggac acgcggacta cgttaaaaac atgatcactg
    24721 gtgctgctca gatggacggt gctatccttg tagtagcttc aactgacggt ccaatgccac
    24781 aaactcgtga gcacatcctt ctttcacgtc aggttggtgt taaacacctt atcgtcttca
    24841 tgaacaaagt tgacttggtt gacgatgaag aattgcttga gttggttgaa atggaaatcc
    24901 gtgaccttct ttcagaatac gatttcccag gtgatgatct tccagttatc caaggttcag
    24961 ctcttaaagc ccttgaaggt gacactaagt acgaagacat cgttatggaa ttgatgaaca
    25021 ctgttgatga gtacattcca gaaccagaac gcgacactga caaaccattg ttgcttccag
    25081 tcgaagacgt attctcaatc actggtcgtg gtactgttgc ttcaggacgt attgaccgtg
    25141 gtactgttcg tgtcaacgac gaaatcgaaa tcgttggtct tcaagaagaa aaatctaaag
    25201 cagttgttac tggtgttgaa atgttccgta aacaacttga cgaaggtctt gccggcgata
    25261 acgttggtgt gcttcttcgt ggtgtacaac gtgatgaaat cgaacgtggt caagttatct
    25321 ctaaaccagg ttctatcaac ccacacacta aattcaaagg tgaagtttac atccttacta
    25381 aagaagaagg tggacgtcac actccattct tcgacaacta ccgtccacag ttctacttcc
    25441 gtacaactga cgtaactggt tcaatcaaat tgccagaagg tactgaaatg gtaatgcctg
    25501 gtgataacgt tactatcgac gttgaattga tccacccaat cgccgttgaa caaggtacta
    25561 ctttctctat ccgtgaaggt ggacgtactg ttggttcagg tatggttaca gaaatcgaag
    25621 cttaattcga ttgagttccc agaaataaca attatagtca gacaacttaa ttgtaactct
    25681 ctactttcgg gtagagagtt tttctgtaag tattcataaa atgcacagaa attctttaat
    25741 cttagctaag tttatgctat aatgtacctt gtacaataaa tatagaagag gtaagtgaaa
    25801 tgtcacgtaa accaatcatt gccggtaact ggaaaatgaa caaaaatcct caagaagcac
    25861 aagcattcgt tgaggctatt gcaggaaaat tgcctgcagg agacaaaatt gaagcagcta
    25921 tcgcagctcc agctgtagat ttgaacgctc ttttgtggtt cgctaaagat tctgaattga
    25981 aagttgctgc tcaaaactgc tactttgaag atgctggtgc cttcactggt gaaacatctc
    26041 caaaagtatt ggctgaaatg ggtgttaact atgttgttat cggtcactca gagcgtcgtg
    26101 attacttcca cgaaactgat gaagatatta ataaaaaagc tcatgcaatc ttccgtaacg
    26161 gtttgactcc aatcatctgt tgtggtgagt cacttgaaac ttacgaagct ggcaaagcag
    26221 tagaatttgt aggtgcacaa gtttctgcag ctttgaaaga cttgactgct gaacaagtag
    26281 catcacttgt tattgcttac gagccaatct gggcaatcgg tactggtaaa tcagctacta
    26341 aagacgatgc acaaaacatg tgtaaagctg ttcgtgacgt tgttgctgct gatttcggtc
    26401 aagaagttgc agacaaagtt cgcgttcaat acggtggttc tgtaaaccca tcaaacgttg
    26461 ctgaatacat ggcatgtcca gatgttgacg gtgcgcttgt tggtggtgca tcacttgaag
    26521 cagaaagctt cttggctttg ttgaacttct aatatagtca tttagttttt cttttattac
    26581 ttcgacgtaa gaggaaactc
//
LOCUS       DASFQS010000017        26230 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.017, whole genome shotgun sequence.
ACCESSION   DASFQS010000017 DASFQS010000000
VERSION     DASFQS010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 26230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26230
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.017"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(15..233)
                     /locus_tag="U1041_000671"
     CDS             complement(15..233)
                     /locus_tag="U1041_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009880371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767798.1"
                     /translation="MHFFLRDIRQRSELANIIIIGKDIDYEELFRNHYRVFGVIDTSE
                     DQSFGYIRKEIFHYLDALYPSQTPGKKR"
     gene            639..866
                     /locus_tag="U1041_000672"
     CDS             639..866
                     /locus_tag="U1041_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003062179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComC/BlpC family peptide pheromone/bacteriocin"
                     /protein_id="HEM4767799.1"
                     /translation="MNTKIMERFEELRSDKLLTIEGGFPWGTLFSGAIDAMDGGGQTL
                     DQLNGKWPKRNPPRPCTPFGTGGTPNACNGL"
     gene            847..1152
                     /locus_tag="U1041_000673"
     CDS             847..1152
                     /locus_tag="U1041_000673"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767800.1"
                     /translation="MLVTDYNIQDNPESEIEIWQVSKSGPQPIWVQEAFAKHYFQWLD
                     NRLRILVAGLNKEWWHQSGRYYGQGMYVLAEIGDIVDKTHCRIFTEKQFQKQYGQKA"
     gene            1443..1784
                     /locus_tag="U1041_000674"
     CDS             1443..1784
                     /locus_tag="U1041_000674"
                     /inference="COORDINATES: protein motif:HMM:NF016296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator
                     DNA-binding domain-containing protein"
                     /protein_id="HEM4767801.1"
                     /translation="MPFLMIRTAKEWIKLPLDQVYDITSHPDKAHYVRIKTAGKSYDV
                     LDSLSRLEKEYSPVLVRCHRNCLVNLSKIREIDVEKRALILESNRPIAFSRRRYQELR
                     QLWLNKGEEIR"
     gene            1784..2524
                     /locus_tag="U1041_000675"
     CDS             1784..2524
                     /locus_tag="U1041_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012516119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4767802.1"
                     /translation="MNVFVLEDDFAQQSRIESIVGSLMERHHIQTKKFEVFGKPDQLI
                     RAVEEKGAHQLFFLDIEIRADDKKGLEVAQQIRDIDPFAIIVFVTTHSEYMPLAFRYQ
                     VSALDFIDKELAPAEFEARIETALLYANGKNSRTVAEDSFYYKSRYAQVQVPFADILY
                     IETSPHPHRVILHTEKDRLEFTGNLADILKQEKRLLQCHRSYLVNPNNVVKVDRQMKV
                     LYFRNGSNCYVARNRMELVHNAIRDLHR"
     gene            2534..3865
                     /locus_tag="U1041_000676"
     CDS             2534..3865
                     /locus_tag="U1041_000676"
                     /inference="COORDINATES: protein motif:HMM:NF025854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HEM4767803.1"
                     /translation="MSFLFFVIAIVVMFVLPSLSIAWISGRKLPWTYLALGFLVDLGL
                     NILTIVYPDLAVITFSSEIITKLLVSYLLFGKESKTLAVFYAFFTSILFNLFHRSLVF
                     FLLPMFGWDKEVLWEPLGRSVSGIVCWALVFFFLKWLGYDFSQLWSRTLDEKDRKVLT
                     VTNYLMIGYFFLNHILIYLEQIYQIDTVVYRQFIVVVYLVLFMGVVYRLDRHIKERLQ
                     AALLLQKERQLQDMERYSQHIEGLYREVRGFRHDYANLLTTLRLGIDNQDLSLIEEVY
                     QSVFKGSNASFRHQKYDVGRLIHLDNPALKSLLAVKFMQAAEQGIAVSLEVPNPISPK
                     GIELLDFITIASILCDNAIEATMETEQPSMSIAYLSLGDKQLFIVENTTKEESVALAN
                     LTDFGRSSKGEGRGIGLYTVREILNGYLNVSLNTSSCNHTFCQVLEIMVEK"
     gene            complement(4062..4211)
                     /locus_tag="U1041_000677"
     CDS             complement(4062..4211)
                     /locus_tag="U1041_000677"
                     /inference="COORDINATES: protein motif:HMM:NF015035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComC/BlpC family leader-containing
                     pheromone/bacteriocin"
                     /protein_id="HEM4767804.1"
                     /translation="MDKQKHNTSFTQLSDTELQSIIGGDWWTDFIKLIPKPFDIALPG
                     KRKQG"
     gene            complement(4309..5670)
                     /locus_tag="U1041_000678"
     CDS             complement(4309..5670)
                     /locus_tag="U1041_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012766651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin secretion accessory protein"
                     /protein_id="HEM4767805.1"
                     /translation="MNTNLFRSAEFYQRRYHNFATLLILPLVLLVSFLFLFSFLAKKE
                     VTVTSRGEITPTKVIASIQSTSNNPILANHLVANQAVKKGDALIQYAETMEASQKQAL
                     ESQVHNLEEQKKGLETLRNSLEQGTNLFTGEDNFGYGATFQQFVSQTQDLELGIAKTN
                     AEVTNQAALANHTAAAIDQQLSQLQQDIIAYEELKTAISTQASSLPTGNPHQATLNNY
                     LAQVQGTPNPALSDQYISQINQTIAGLENSMASLSIQRAGTGSIATYDTSLATKIESL
                     RAQFLQNAAQQLTTVESQLLQAKSQLDQAATQLEQTTITAPENGVIALNPEFEGKNLI
                     PVGSDIAYLYPDIKQTKTVLITYYVTSEYVALLKEGQTARLSLEKIGNQPIIVIGSIQ
                     SIAQSATPTEEGNLFKITAQATITENESSLLQYGLQGRVTSVIAKKTFFDYYKDKLLH
                     TNN"
     gene            complement(5680..7833)
                     /locus_tag="U1041_000679"
     CDS             complement(5680..7833)
                     /locus_tag="U1041_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_125458604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide cleavage/export ABC transporter"
                     /protein_id="HEM4767806.1"
                     /translation="MTKIKKTFVPQIDARDCGVAALASIAKYYGSDYSLAHLRELAKT
                     NKEGTTALGIVKAAHEMGFETRAIQADMSLFDMTDIPYPFIVHVNKEGKLQHYYVVYK
                     NLKDQVLIGDPDPTVKVTKMSKERFASEWTGVAIFLAPEPSYKPHKDKKNGLLDFLPL
                     IFQQRTLIFYIVLASLLVTLINIAGSYYLQGILDEYIPNQMKSTLGIISIGLIITYIL
                     QQMMTFSRDYLLTVLSQRLSIDVILSYIRHIFKLPMSFFATRRTGEVISRFTDANSII
                     DALASTILSLFLDVTILTIVGGVLLVQNTHLFLLSLISIPIYVVIIFAFIKPFERMNN
                     AVMQSNSMVSSAIIEDINGIETIKSLTSEEQRYQKIDSEFVDYLEKSFTLSKYSILQS
                     TLKQGAQLILNITILWLGSQLVMTGKISIGQLITFNTLLSYFTNPLENIINLQTKLQS
                     AKVANNRLNEVYLVESEFQEGQTLTDPSFLKGVIQFEDVSYKYGFGRDTLSDIQLTIK
                     EGDKVSLVGISGSGKTTLAKMIVNFFEPYKGRITLNHNDLKMVDKKVLRQYINYLPQQ
                     AYIFSGSILDNLTLGANQTISQEDILKACEIAEIRSDIEQMPMGYQTELSDGAGLSGG
                     QKQRIALARALLTKAPVLILDEATSGLDVLTEKKVIDNLMAMTDKTIIFVAHRLSISE
                     RTNQVIVLDQGKIIETGSHQELMSRGGFYHHLFSK"
     gene            8138..8368
                     /locus_tag="U1041_000680"
     CDS             8138..8368
                     /locus_tag="U1041_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018364969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin class II family protein"
                     /protein_id="HEM4767807.1"
                     /translation="MNTKTMEQFEVMDVEMLASVEGGYSAGKCLADIGWGMVEGVVTG
                     AIAGGLMGAGIGFGLGQIGGSIYCIGNVLGGK"
     gene            8370..8561
                     /locus_tag="U1041_000681"
     CDS             8370..8561
                     /locus_tag="U1041_000681"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767808.1"
                     /translation="MNLLENLPDQTLELTTGGGSVNWVVAGTQCLGAGVIGLIGGPWT
                     ALGACVISGGRSITGDLLN"
     gene            9064..9204
                     /locus_tag="U1041_000682"
     CDS             9064..9204
                     /locus_tag="U1041_000682"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767809.1"
                     /translation="MQLSESKLSEVQGGSRDSYCSGQIAARVIFKRLLGQVILPTDLI
                     CQ"
     gene            9224..9364
                     /locus_tag="U1041_000683"
     CDS             9224..9364
                     /locus_tag="U1041_000683"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767810.1"
                     /translation="MKQIQFRELSEIDLEATNGGDWLKDVGDYWSGVIDGIKDAFGIR
                     RK"
     gene            9379..9990
                     /locus_tag="U1041_000684"
     CDS             9379..9990
                     /locus_tag="U1041_000684"
                     /inference="COORDINATES: protein motif:HMM:NF014566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767811.1"
                     /translation="MVESDKSVRQYIPLLLILLVYPYGIGLVAREFVADALVFVTGLV
                     TLFLLYRQGYGDILVFRKPTWKIVRRVILAFLCKLCWAVIVYHFLSSTKNEEALDSWS
                     YTGVQLFLYNLYLLVYGPICEELVFRGYMMRSLAPVSHLQLDVLCSACLFSLGHVLPT
                     GWVLNDFLVYLGSGLIYAILFKKSATIYPVIILHIMWNSLMVL"
     gene            10152..10448
                     /locus_tag="U1041_000685"
     CDS             10152..10448
                     /locus_tag="U1041_000685"
                     /inference="COORDINATES: protein motif:HMM:NF020523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin immunity protein"
                     /protein_id="HEM4767812.1"
                     /translation="METREKIMEELINLILNPTTTAEERKLLVAYKQEFERTRDTERT
                     ILALAESIRKLAVRNVFYRISLSPGLSQFYKKISAYGEWEKNLGRGLIATGIIR"
     gene            10592..11647
                     /locus_tag="U1041_000686"
     CDS             10592..11647
                     /locus_tag="U1041_000686"
                     /inference="COORDINATES: protein motif:HMM:NF012314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein"
                     /protein_id="HEM4767813.1"
                     /translation="MKKNLLASSLVCTIVLTSLQGSVIQAETTGQADSSPVVTEVVQP
                     TEEKEGTAPTSETEETAETTGSSSTVNEEVSQAVEISLEDYLETVAAFQKIDIGAVRA
                     AFTEDNQEHLLYFGCGTCYYCRQFSPELKNLHQLTGGKIEYYDTAGEDFDDTAKEFLF
                     KEVGIPGTPTILYIKNGQVLAGWVGGGISAQELYDYFYLGKTPPQLVAGEEQAPSATD
                     EQAPVETALPTTQEVPQGEQASQDRQEAPKEQGSPQEVETAPKDTQPSQESQEASKNE
                     ADASLLELTEPNPSRVSAVRQVKPVLPTSPAQSAGTKILPKTGEASSEIGWPMGLLTL
                     MLALVIQGLAIIHKEAE"
     gene            11647..12348
                     /locus_tag="U1041_000687"
     CDS             11647..12348
                     /locus_tag="U1041_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767814.1"
                     /translation="MKRLKKIALFVGLILLTIVFNLLPMLFIGQEAQTPVAMKWVFSI
                     AYLALVGFLIFLIGKRYRQQVTETVRELRFTWKDFGIALLFFLATRVVAVLGTLLVQI
                     GTGNTMSANDAALFATSEQVATMFPLYFIAFHVAIGLFAPVMEEIVFRGFFSQYFFKA
                     GNKWLKLVISSSIFALFHIVYPIEFVTYFALGAIFYLAYARRGSIKDAIAVHILNNSL
                     LVLFSVINYLIILFG"
     gene            12365..12511
                     /locus_tag="U1041_000688"
     CDS             12365..12511
                     /locus_tag="U1041_000688"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767815.1"
                     /translation="MKELSKAQLVSIIGGGQLSSLIGLPIVVKGPGREIPKPRPVQPP
                     AEIM"
     gene            12610..13254
                     /locus_tag="U1041_000689"
     CDS             12610..13254
                     /locus_tag="U1041_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008087192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767816.1"
                     /translation="MNIREYQTSDEKGWVYCKALSYLFSPFFDDRETEKPALLTDIYD
                     KRIELVAESDDQIVGLIDIDIYSQETSQTYLYAPSQRTAYLTNLAVHPDYQGQGIAQA
                     LYEKAEQALKEAGVEKLAIFTRDGDAANHLYKKWGGQLICTDYLVIGTPKDTPYVRFG
                     VDLPNAKLAFTDEAGQPEPYYLREGVYVVTDQADLELFDIEEVYQELTYVVDLV"
     gene            13408..13722
                     /gene="trxA"
                     /locus_tag="U1041_000690"
     CDS             13408..13722
                     /gene="trxA"
                     /locus_tag="U1041_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEM4767817.1"
                     /translation="MVQVVTDANFEVETQEGVVLVDFWAPWCGPCRMQAPILEQLAEE
                     LDEDELRIYKMDVDENPNTARQFGIMSIPTLLFKKDGQVVKQVAGVHTKDQIKAILAE
                     IG"
     gene            13774..14712
                     /gene="msrB"
                     /locus_tag="U1041_000691"
     CDS             13774..14712
                     /gene="msrB"
                     /locus_tag="U1041_000691"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEM4767818.1"
                     /translation="MKEIYLAGGCFWGMEGYFSQIDGILDTSVGYANGQVETTNYQLL
                     KQTDHAETLYLAYDEARINLREILLYYFRVIDPFSVNQQGPDKGRQYRTGIYYTDKAD
                     LPTIEQVMTEQSQLFGGRPLAVEVEPLAHYIPAEDYHQDYLKKNPQGYCHIDLGQAKI
                     PLIDVADYQKPDQQVLKDSLTDLQYQVTQEAATERPFENEFWNSDQAGIYVDITTGEP
                     LFLSTDKFDSGCGWPSFTKPISKEVATYFQDLSHGMNRIEVRSRAGHAHLGHVFDDGP
                     RDKGGLRYCINSAALRFIPREEMEEAGYVLFLDLLK"
     gene            14954..16939
                     /locus_tag="U1041_000692"
     CDS             14954..16939
                     /locus_tag="U1041_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
                     /protein_id="HEM4767819.1"
                     /translation="MKGKFVLVSTIILAVFMIWLGVSQKETMLVHYYPSVTALSVSED
                     VTYSDVRQRLEEYSQQTDSVIARRVIEPSTSGGRTFSYDNFSQSPLPRGLEEFQSSEK
                     VESTLLTKYFIFQGKATVEELCSLLVSLGFDEVQIRKPSTIATLLAFLTQGGQFLAVL
                     VFLITYMALVVIANVRQLRTAGIRLIAGDSRWHLFLLSLQENAKEIALTIPFVVLPAV
                     GLAYLIGLDGYSVYYLVAALVGYHFLLGLIVLFFAATFTLAIRTYHFLPLLKGKMPLQ
                     GILTIMVMGQMLALLVVSLGVAQTVYYSGIWQEYQVGAQQWENEGDYYSLAWNISADG
                     RSGLNSPENWYPLLKQALEEDGALFVKSNLNAYLMGSQLEDGTRLDSYHPAGNTLYVS
                     PNYLQIQDVDLAEGEVALPLQEGEFQLLLPEKLRPESDTYLHLYQDYINRMVRPANQA
                     RSATIKGKVAYLKDGQKQFIYNHRSGQHVQYLTDPILVVLAPSSLGKESADFWLNEVD
                     SSILFKNRDKLLRELKARNLFQFVNEVKSSSSLFTELLDRIRIETISTSMGAILGIVT
                     SIVLFNTMNLLYFEEFKREIFIKEIAGMDFLGIHKKYLTFQLLSLLLALGASVVVTGH
                     IFISSISFAMFIINALYLLRWQARKDGAWNIRILKGA"
     gene            16941..17573
                     /locus_tag="U1041_000693"
     CDS             16941..17573
                     /locus_tag="U1041_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767820.1"
                     /translation="MFSIQSIQKKFGKRSLFSDVTLDLQAGKVYALIGASGSGKTTLL
                     NILAKLESYDAGDILYKGKELKKLKPHLFFREELGYLFQNFGLLESQTIKENLDLGLI
                     GQKLSKDQRKSRQEAALDAVGLSYLNLSQPIYELSGGEAQRVALAKVILKNPPLILAD
                     EPTAALDPKSSQEIMDILLSLKSPDRLIVIATHNPLIWERADLIIKMEDL"
     regulatory      17786..17890
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            17996..19330
                     /locus_tag="U1041_000694"
     CDS             17996..19330
                     /locus_tag="U1041_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEM4767821.1"
                     /translation="MLELFKAINNLVWGPPLLLLLVGTGVYLTLRLGVFQIGKLPTAF
                     RLIFSSDQSGQGDVSSFAALCTALAATVGTGNIVGVATAITTGGPGALFWMWVAAFFG
                     MATKYAEGFLAIKYRTKDANGQAAGGPMHYITLGMGQKWKPLAIFFAISGVLVALLGI
                     GTFSQVNSITASLETSFGLAPQLVSIVTAISIAFFIFGGIEKISDVSTKIVPFMAILY
                     ILASVIVLAMHFDQILPTLALVLKSAFSPAAAAGGFAGATVQQAIQRGIARGVFSNES
                     GLGSAPIAAAAAKSDNPVEQGLISMTGTFIDTLIICTLTGFTILVTDQWSVEGLAGAP
                     LTQAAFATVFGNTGSIALTISLVLFAFTTILGWSYYGERCIEFLFGTKSILPYRLLFV
                     AMVALGGFLKLDLIWTIADIVNGLMALPNLIALLALSPVIIKETRQYFAKKK"
     gene            19395..20243
                     /locus_tag="U1041_000695"
     CDS             19395..20243
                     /locus_tag="U1041_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEM4767822.1"
                     /translation="MNDFITKYLSQFNIEAIVTAGLNKVLSLVLLFVAFYIIKKIAKS
                     SVKKVLVPSLKVSTQDIGRQKTISRLVESILNYLLYFILIYCILSILGLPVSSLLAGA
                     GIAGVAVGLGAQGFLSDLVNGFFILIERQFDVGDVVKLTNGPITISGTIVSMGIRTTQ
                     VRDADGTLHFIPNRNILVVSNQSRGDMRAQIDIPLKFNTDLEQVYHVIEEVNLREISN
                     FDQITGVTVLGPQNTTNGQFVFRVNLFVANGQQNKIYHQFFGFYQDALRQAGIDLPSS
                     GPTVLK"
     gene            20254..20838
                     /locus_tag="U1041_000696"
     CDS             20254..20838
                     /locus_tag="U1041_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4352 domain-containing protein"
                     /protein_id="HEM4767823.1"
                     /translation="MQTKDFVVENGQMYYKKKPLHKQPLFWTTIAGAVLSFILGVTCF
                     IFMIGLSLSGTSDSWDSEGYFDDTKTYTEYQVGDGVDFSDGLHVTVTSMGKDDSVELV
                     DSYYSTAYVVEMEVENSTAEELYFDEYYFSLMDPVSQIPFTLDLRTYDVNLVEKLKPG
                     EKVQVKLIYGIDNETNFGFTYEDAMWTELVAEGI"
     gene            complement(21073..22419)
                     /gene="gdhA"
                     /locus_tag="U1041_000697"
     CDS             complement(21073..22419)
                     /gene="gdhA"
                     /locus_tag="U1041_000697"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEM4767824.1"
                     /translation="MSNAKAYIQASFEAVKARNPHETEFLQAVEELFSTLEPVFEAHP
                     EYIKENILARIVEPERIISFRVPWTDKDGNIQVNRGYRVQFNSAVGPYKGGLRFHPTV
                     NQSILKFLGFEQIFKNVLTGLPIGGGKGGSDFDPKGKTDAEIMRFCQSFMTELQKHIG
                     PSLDVPAGDIGVGGREIGYLYGQYKRLRQFDAGVLTGKPLGFGGSLIRPEATGYGLVY
                     FTDNMLAANGKSFKDQTVLISGSGNVAQYAVQKATELGAKVISVSDSNGYIIDETGID
                     FDLLVDIKEKRRARLTEYAAEKATAKYFEGSVWNYDGKADIALPCATQNEINGDQAAA
                     LVKNGVYCVAEGANMPSDLNAIKVYKENGVLYGLAKAANAGGVAVSALEMSQNSLRLS
                     WTREEVDGRLKDIMANIFNTAKETAEKYDLGTDYLAGANIAAFEQIADSMIAQGLV"
     gene            22642..23579
                     /locus_tag="U1041_000698"
                     /pseudo
     CDS             22642..23579
                     /locus_tag="U1041_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999807.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate oxidase"
     gene            23912..25159
                     /locus_tag="U1041_000699"
     CDS             23912..25159
                     /locus_tag="U1041_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEM4767825.1"
                     /translation="MVKRANYIRRKRYASYRTKMHLFFICGLATIILAIIIVSEHLVP
                     RLNQASESMHSDNSVRIMAHGDLLYHLPILRGAEQPDGSYDFSENFTYVKPWIEQADF
                     AIADFEGTISPDVELAGYPLFNAPAIVANNIHDAGYDLVDLAHNHILDSHLSGLISTV
                     NTFRDAGVDTVGVYAEGNRATAPLYIREVNGIRIAVLAYAYGFNGMEALLSQEEYDAY
                     LSDFDKEKMQAEIERAEKEADITIVMPQTGVEYQLEPTEEQTSLYHQMIDWGADIVLG
                     GHPHVVEPAEIIEKDGQRKLIIYSMGNFLSNQRIESMDDTPNSQWTERGVLMDIRIQK
                     ENGQTSIRTAQAHPTWVNRISQGTYSLDGYERFSYQTYVLEDWVAGGRYYGQLDLDTQ
                     ARVDTAYQEMKDFVNLVWWGERR"
     gene            complement(25351..26202)
                     /locus_tag="U1041_000700"
     CDS             complement(25351..26202)
                     /locus_tag="U1041_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002985634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg/GadR/MutR family transcriptional regulator"
                     /protein_id="HEM4767826.1"
                     /translation="MKSKLGVTLRKVRKGKQISLCSVADAHLSKSQISRFERGESEIS
                     CIRLINILDKLHITLDEFLILHNQDDTKTESFANLVQYIRKQYSSQNINNIQSLLSDS
                     SNYTLNSLEKTMVKSILNTMDSSIIPSDEELLQLTDYLFKVEKWGYYEIILLGNCVRT
                     INYNSYFLLTKEMLNNYIYSSLNKTNKRIVTQLAINCFILSIDKEEYSNCSYLIEKIK
                     ELLDNELNFYEQTVFLYARGYFEFKQQSGTGIEKMKQAIQVLDILGEYKLKLHYTDHL
                     DKLVNKE"
BASE COUNT         7299 a         4903 c         6129 g         7899 t
ORIGIN      
        1 cacttgcagg tgctttagcg ttttttccca ggggtctgag aggggtagag ggcatcaaga
       61 tagtgaaaaa tctctttacg aatatagcca aacgattggt cttcactcgt atcaatcacc
      121 ccaaagacac ggtagtgatt gcggaagagt tcttcgtagt caatatcttt tccgatgata
      181 atgatattgg caagctcgga acgttgtcga atatccctga ggaagaagtg cattttctca
      241 gaagacaagg ccctggactt gacaatgaaa taggttgtag gcttccaaga attatagggc
      301 tcgtaaccga gtttggtctt cacggcaaac cactgtttgc gagcaatgag aaataaatgg
      361 ataataaagc ttgtaaggta gctagtaata gagtaaggga aaatttcaat catgtgtacc
      421 tcctgtttct ttcttgcttc catcttatca aaatgcttgg ttttttagct cgccaaatcc
      481 tgaacagtca ctgaatcgtc ctgaacggta aaaaaacgaa cagttcagga ctgttcaatg
      541 accattcagg aaatgtctaa ttcttttttc aaaaatgagc tatacttaat ttgtcagagt
      601 tgcaactgga caaaaacaat acaatggagg tattcaacat gaatacaaaa ataatggaac
      661 gatttgaaga actaaggagt gataaacttc taactattga aggaggtttt ccttggggga
      721 ctctttttag cggtgcaatt gatgccatgg acggaggagg acagaccttg gatcaattga
      781 atggaaagtg gcctaaaaga aaccctccac gcccttgtac tccatttgga acaggaggca
      841 cacctaatgc ttgtaacgga ctataatatc caagacaatc ctgaatcaga gatagaaatc
      901 tggcaggttt ctaaaagcgg accacaacct atctgggtcc aagaggcttt tgccaaacac
      961 tactttcaat ggctagacaa tcgcctgcgt atccttgttg ctggtctcaa caaggaatgg
     1021 tggcatcaat ctggcaggta ttatggtcaa gggatgtatg ttttagcaga aattggcgat
     1081 attgttgata aaacgcactg tagaattttt acagagaaac aatttcaaaa acagtatggt
     1141 cagaaagcct agtcctcact ctctaaaaag tcttcatttg acgatgaagg cttttctttg
     1201 taccagtatt taggagcgtt ttgcacattt taaaatgcat cgactttgta ttttgtgata
     1261 caatagggaa tacgaacctc cggtttttac ttctagcaat cttatcagta gacttgaatg
     1321 tttaactggc caaatcctga atggtattgt tttaccattc aggacgattt aacgaccgtt
     1381 taggaaatgg agtctctttt cttctgtttt atagtatgct tacaggagaa ggaggtctga
     1441 ttatgccctt tttgatgatt cgaacggcta aggagtggat aaaactcccg ctggatcaag
     1501 tttacgatat taccagtcac cctgacaaag ctcactatgt gcgaatcaag acagcaggaa
     1561 agtcctatga tgtgcttgat agcctcagtc gtctggaaaa agaatacagc ccagtcttag
     1621 tccgctgtca tcggaattgt ctggtcaatc tctcgaagat tagggagata gatgtggaaa
     1681 agagagcgtt gatactagaa agcaatcgtc ccatcgcatt ttcaagacgt cgctatcagg
     1741 aactgcgaca attatggttg aacaaaggag aagaaataag atgatgaatg tatttgtttt
     1801 agaagatgat tttgcccaac agtcacggat tgagtcaatc gttggtagtt taatggagcg
     1861 acaccacatt cagactaaga agtttgaagt ttttgggaaa ccagaccagt tgattcgggc
     1921 agtagaggaa aaaggagctc atcaactctt tttcttggac attgagattc gagcagatga
     1981 caagaagggg ttagaggtgg ctcaacagat tcgtgatatt gatccctttg ccattatcgt
     2041 ttttgttacc actcactccg agtatatgcc tctggccttt cgttatcagg tatcggctct
     2101 ggattttatt gataaggagc tagccccggc cgagtttgag gcacggattg agacagctct
     2161 cctttatgct aatgggaaaa atagtcggac ggtggcagag gattccttct attacaagtc
     2221 gcgttatgcc caggtccaag ttccctttgc ggatattctc tatatcgaaa cctctcctca
     2281 tccccatcgg gttattctgc atacggagaa ggatcgctta gagtttacag ggaatttggc
     2341 agatattttg aaacaagaaa aaagactgct ccagtgtcat cgctcttact tggtcaatcc
     2401 caataatgtg gtcaaggttg atcgacagat gaaagttctc tacttccgaa atggtagcaa
     2461 ctgctatgtc gctcggaatc gaatggagct agttcataat gccattcgag acttgcatag
     2521 ataggagtag ctaatgagtt ttctattttt tgtgatagca attgtagtga tgtttgttct
     2581 cccctctctt tcgattgctt ggataagtgg tcggaagctc ccctggacct atcttgccct
     2641 tggttttctg gtggatttgg ggttgaatat actgaccata gtctatccag acctagcagt
     2701 aataaccttt tcgtcggaaa taataactaa attgctagta tcctatctat tgtttggaaa
     2761 agagtccaaa accttggcag tcttctatgc cttctttacc tctatcctgt tcaatctctt
     2821 tcatcgtagc cttgtcttct ttctcctccc catgtttggc tgggataaag aagtcctatg
     2881 ggagcctctt gggcgaagtg tatcagggat agtgtgctgg gcactggtct tcttcttttt
     2941 gaagtggctg ggatatgact tttcacagct atggtcccga accctagatg agaaagatag
     3001 gaaggttttg acagtcacca attacttgat gatcggctat ttcttcctta atcatatttt
     3061 gatttatttg gagcaaatct atcagattga tacggtcgtg tatcgccagt ttatcgtggt
     3121 agtctacctg gtcttattca tgggggttgt ctaccggttg gaccgacaca tcaaggaacg
     3181 gttgcaggct gccttattgc ttcagaagga gcgtcagttg caagatatgg agcggtacag
     3241 tcagcacata gagggactct atcgagaagt gagaggcttc cgccatgact atgccaatct
     3301 tttgacaacc ttgcgattgg gaatcgacaa tcaggacctg tccttgattg aagaggtata
     3361 tcagtcagtt ttcaagggct ctaatgcctc ttttcgtcat caaaagtatg atgtggggcg
     3421 gttgattcat ctggacaatc cagccctcaa gagtctcttg gcggttaaat ttatgcaggc
     3481 tgcagaacaa gggattgcag tttccttaga ggtaccaaac cctatttctc ccaaagggat
     3541 agagctgtta gactttatca cgatcgcctc tattctttgt gacaatgcga tagaagcgac
     3601 catggagacc gagcaaccaa gtatgagtat cgcctatctc tccttaggtg acaagcaact
     3661 ctttatcgta gagaatacga ctaaggaaga gtcggtcgcc cttgctaatc tgacagattt
     3721 tggtaggagt agtaaaggag aagggcgggg aatcggtctc tacactgtca gggagatttt
     3781 gaatggctac ctcaatgtct cgctaaatac cagtagttgc aaccatacct tctgtcaggt
     3841 tctggaaatc atggtagaga aatgagggta gagctgttga acttcttggt gccactaaga
     3901 aaacggccta cttggttgtt aaccagctgg ctagagataa gtgaaggatg attcagttct
     3961 tgacttagtg accggagtct agattgctga ttattgcaca tgacaaatag ttaaaaggct
     4021 tgaacctttc gtttcaagcc ttttgttatc taggtgattt cctacccctg tttacgctta
     4081 ccagggagag cgatatcaaa tggtttggga attaacttaa taaagtctgt ccaccagtca
     4141 cctcctatga tagactgcaa ttctgtgtcg gatagctgtg taaatgatgt gttgtgtttt
     4201 tgtttgtcca tgattggacc tccttttttc ttgtttatgt tattataaac gaaaattctc
     4261 aaaaaatctt ccccatatcc taaatggtcg ttgaaacgtc ctgaatggtt aattatttgt
     4321 gtgaagcagt ttatctttgt agtagtcgaa gaaggtcttc ttagcaatca cactggtgac
     4381 gcgaccctgt agaccatact gtagaagtga gctttcattt tctgtaatgg tagcttgggc
     4441 tgtaatctta aagagattgc cctcttctgt cggtgttgcg gattgagcga tagactggat
     4501 ggagccgatg actatgattg gctgattgcc gattttctct aagcttagtc gggcggtctg
     4561 gccttctttg aggagggcga catactccga agtcacatag taggtgataa ggacggtctt
     4621 ggtttgcttg atatcaggat agagataggc gatatcgctc cctactggaa tcaagttttt
     4681 tccctcgaac tcaggattta gggcgatgac accattttct ggagcggtaa tggtagtttg
     4741 ttctaattga gtagctgctt gatcgagttg cgactttgcc tgaagcaatt gagattcgac
     4801 agtggtcagt tgctgagctg cgttttgtag aaactgggca cgtaaacttt cgattttagt
     4861 cgctagactt gtgtcgtagg tggcgatgct accagtacct gcccgttgaa tagagaggct
     4921 agccattgag ttttccaatc ctgcgatggt ttggttaatc tggctgatgt attgatcact
     4981 aagggcagga tttggtgttc cttggacttg ggctaggtag ttgttcagag tggcctggtg
     5041 gggattgcct gtcggcaagc tacttgcttg ggtgctaatc gctgttttaa gctcctcgta
     5101 ggcgatgatg tcctgctgga gttgactgag ttgttggtca atagcagcag cggtgtgatt
     5161 ggccaaagct gcttgattag tgacctcggc attcgtttta gcgataccta attctaggtc
     5221 ttgtgtttgg ctgacgaatt gctgaaaggt tgctccgtag ccaaagttat cttctcctgt
     5281 aaagaggttg gtaccctgtt caagactgtt tcgtaaggtc tccaaccctt ttttctgctc
     5341 ttctaggtta tgaacttgac tttctaaggc ttgcttctgg gaagcctcca ttgtttcggc
     5401 gtactggatg agagcatcgc ctttttttac ggcttgattg gctacgagat gattggcaag
     5461 aataggattg ttactggttg attgaatgga ggcgatgacc ttggtaggag taatctctcc
     5521 tcgtgaagtg acagtgactt cttttttagc taggaaggag aagagaaaaa ggaaggagac
     5581 cagtagtacc aaggggagaa tcaaaagggt cgcaaaatta tggtagcgtc gctgataaaa
     5641 ttcagcactt cgaaataggt ttgtattcat aaaaactcct tacttactga acaaatggtg
     5701 atagaaaccg ccgcgagaca ttaattcttg gtgagagccg gtttcaataa tcttgccctg
     5761 gtccagcaca atgacttggt tggtacgttc ggaaatgctg agacgatggg caacaaagat
     5821 aatggttttg tctgtcatgg ccatgaggtt gtcaatgact ttcttttcgg tgagaacatc
     5881 cagcccgcta gtcgcttcat ccagtataag cacaggtgcc ttggtcaaga gggctcgtgc
     5941 aagagcaatc cgttgttttt gcccgccaga tagaccagct ccgtcagaaa gctcagtctg
     6001 atagcccatt ggcatctgtt caatatccga gcggatttct gcaatttcac aggcttttag
     6061 gatatcctct tgactgatag tttggttggc accgagagtc agattgtcca agatagagcc
     6121 actaaagata taggcttgtt gggggaggta gttgatgtat tggcgtagga ctttcttatc
     6181 aaccattttt agatcgttat gattgagcgt gatgcgtccc ttatagggtt caaaaaagtt
     6241 cacaatcatt ttagctagtg ttgtttttcc agaaccactg ataccgacta aactaacctt
     6301 gtccccttct ttgatggtca gttgaatatc agatagggtg tctcgtccaa atccgtattt
     6361 ataggaaaca tcttcaaact gaataactcc ttttaagaag cttggatcgg ttagggtctg
     6421 tccttcttga aattctgact caaccaagta gacttcatta aggcgattgt tggcaacttt
     6481 ggcagattgg agcttggtct ggaggttgat gatattttcc aagggattgg tgaagtaaga
     6541 gaggagggta ttgaaggtga tgagttgtcc gatagagatt tttcctgtca tgactagttg
     6601 agagccgagc cagagaatag taatgttgag gatcagctgg gctccttgct tcagagtgga
     6661 ttgcaggatc gaatacttgc tgagggtaaa ggatttttcc agataatcca caaattcgct
     6721 gtcaatcttt tggtagcgtt gttcttcgct tgtcaatgac ttaatggtct caataccatt
     6781 gatatcttcg ataatagcag agcttaccat cgaattactc tgcataacag cgttgttcat
     6841 tctttcaaag ggtttgataa aggcaaagat gatgaccacg tagattggga ttgaaatcag
     6901 tgagaggagg aagaggtgcg tgttttgtac caataagacc ccgcccacaa tggttaaaat
     6961 agtcacatct aggaagaggg agaggattgt agaggctagg gcatcgatga ttgagttggc
     7021 atctgtaaaa cgagagatga cttcacctgt tcgccgtgtc gcaaagaagg acatggggag
     7081 tttgaagata tgtcggatat aggagagaat gacatcaatg ctgagccgtt gactgagaac
     7141 agttaatagg tagtctctgg agaaggtcat catttgctgg agaatatagg tgataatcag
     7201 tccgatggag atgatgccga gagtggattt catctggttt ggaatgtatt catctaaaat
     7261 cccttgcaga tagtaggagc cagcaatgtt gatgagggtg acgagtaagc tggctagaac
     7321 gatataaaag ataagtgttc gttgttggaa gatgagggga aggaagtcga gcagaccatt
     7381 tttcttatcc ttgtgcggtt tatagctcgg ttcaggtgca agaaagatgg ctactcctgt
     7441 ccattcggaa gcgaatctct ccttgctcat cttggtaact tttacagtcg ggtcgggatc
     7501 gccaatgagg acctgatctt tcaaattttt atagaccaca tagtaatgct ggagttttcc
     7561 ctctttattg acatggacaa tgaagggata aggaatatca gtcatatcaa agaggctcat
     7621 atcggcttgg atagccctgg tttcaaagcc catttcatgt gcagctttca cgataccgag
     7681 ggctgttgtt ccttctttat tagtctttgc taactctcgc aagtgggcca aggagtagtc
     7741 tgagccgtag tatttggcga tagaagcgag agcagcgact ccgcaatctc gggcatctat
     7801 ctgagggacg aaggttttct ttatcttggt catatctagt ttcctttcct attgaactaa
     7861 aagtagtcta gtagcattat gtcatagatt taagaaaata agcatccaaa tcctgaacgg
     7921 tcgctgaaac atcctgaacg gtttctcttt cccgacggct gttcttcctg ggcggtcaca
     7981 aaaaagtcct gaacggtcat ttctttccca ttcaggacga ttggacgaca gttcaggaaa
     8041 tggagcagta tttttctaaa aatcagctat actaaacttg tcaaagttgc aacgagacac
     8101 attcaaaaaa ataaacataa aaaaggaggt gttcgatatg aatacgaaaa caatggaaca
     8161 atttgaagtg atggatgttg aaatgcttgc gagcgttgag ggaggatact cagccggtaa
     8221 atgtttagct gatattggtt ggggaatggt tgaaggagta gttaccggtg caatagctgg
     8281 aggattaatg ggcgcaggaa tcggatttgg actaggacag attggtggta gcatttactg
     8341 tattggaaat gtattggggg ggaaataata tgaatttgct agagaattta cctgatcaaa
     8401 ctttagaact tacaaccggt ggtggaagtg taaactgggt tgttgctggt acacaatgtc
     8461 ttggtgcagg agtaattggg ctaattggag gaccatggac tgcattaggt gcttgtgtta
     8521 ttagtggagg aagatcaata actggagact tacttaattg attttaaaag atatttcaat
     8581 aatcattttt agtaacacct tttcatattt tatagtgtta tttattattc atgtaattag
     8641 ttattctaaa aaaaatgtgg aaatcttaaa aagatctaga ttaataattg gggtgtttgt
     8701 gctgttaaat tttatccgag atatcataca atactttttt atgtgatagt attgtgaaat
     8761 atagtgtaag tgagtactca tagagctaca actttccata aattgtaagt aaccgcatga
     8821 acatgtgata atctgtgtat gaaatggaag aaatttatgg aggttgttct ctgggaggtc
     8881 taacgatatc agttgtaaaa ggtggaggaa acccaacgaa aacagctgtt agtgcaggga
     8941 tatatgtatt aacatgttgg tggtaatgct aaattgtact gtttatcatc tatgtagcat
     9001 ataagtgatt agaagtctga tgtaactaaa catttgaaag gtgctaaaat gagaaaagat
     9061 tttatgcaac taagtgaatc aaaacttagt gaagttcaag gtggtagccg agatagctac
     9121 tgttctggtc aaattgcggc gcgtgtgatt tttaagagat tactaggtca ggtaatttta
     9181 ccaacggatt taatatgtca gtaagtgtaa aggagattca gtcatgaagc aaattcaatt
     9241 tagagaactg tcggaaatcg atttagaagc aaccaatggt ggtgattggt tgaaagatgt
     9301 tggcgactac tggagtggtg ttattgatgg tataaaggac gcatttggaa ttcgtcgaaa
     9361 atagaggtgg acaaagaaat ggtagagagt gataagagtg taagacagta tattcccttg
     9421 ttgctgattc tcctagtata tccttatgga attggtctag ttgcaagaga atttgttgcg
     9481 gatgccctcg tattcgtgac agggttggtg accctctttc tcttgtatcg acaaggctac
     9541 ggagatattt tggtctttag gaaacctaca tggaaaatag ttagaagggt cattttggca
     9601 tttctctgta agctgtgttg ggctgtcatt gtctatcatt tcctatcctc tactaaaaac
     9661 gaagaagctc tggatagttg gagttataca ggagtccagc tcttccttta taacctctat
     9721 cttcttgttt acggtccaat ttgtgaggag cttgtattcc gaggctatat gatgagaagt
     9781 ttggcacctg taagtcatct acaactagat gtattgtgct cagcctgtct cttttctctc
     9841 ggccatgttt taccaactgg ctgggtgctg aatgactttc tggtttattt gggctcggga
     9901 ttgatttatg caatactttt taagaaatcc gcaacaattt atccagtcat cattctccat
     9961 atcatgtgga atagtttgat ggtcttgtag caaacaaaaa ggaaaagttt ggagtccaga
    10021 tagatgctgg gcttcatttt tgtatttgta accattcagg aagcctggac gacagttcag
    10081 gaaatgggca aacgaagatg cgattacctg ctatactgat gctatcaatg acaacatatg
    10141 gaggttagaa aatggaaacg agagagaaaa tcatggaaga actaatcaac cttatcttga
    10201 atccgaccac tacggcagag gagcggaaac tcttggtcgc ctataaacag gaatttgaac
    10261 ggaccagaga tacagagaga acaatcctcg ctttagcgga gagcattcga aagttggctg
    10321 ttcgcaatgt tttctataga atcagcctct cccctggcct aagtcaattt tataaaaaaa
    10381 tatcagccta tggagagtgg gagaaaaatc tgggtagagg tctcattgct acaggaatca
    10441 ttcgataaat agtaggaagt catccttgga ttttgtcagg atttgcaggc ctcttccatt
    10501 caggacgctt ggatgaccat tcaggaaatg ggcaaatcat ttggagaaaa atctgtacaa
    10561 taagcctata aagaaaaaag gagttgtaga aatgaaaaag aacttacttg ccagttccct
    10621 tgtttgcacg attgttctta ccagtcttca agggagtgtg attcaggcag agacgactgg
    10681 gcaagcagac tcttcaccag tggtgacgga ggttgtgcag ccgacagaag agaaagaagg
    10741 aacagcacca acttctgaaa ccgaagagac ggcggagaca actggatcgt cctcaactgt
    10801 aaatgaggag gtcagtcaag cagttgagat tagtctggaa gactatctgg agactgtggc
    10861 agcttttcaa aagattgata tcggagcagt gcgagcagca tttacagagg acaatcagga
    10921 acaccttctg tactttgggt gtgggacctg ttattactgt cgtcaattct cccctgagtt
    10981 aaagaacttg catcaattga caggtggaaa aatagagtac tatgatacgg caggggaaga
    11041 ctttgatgat actgccaagg aatttctctt taaggaagta ggaatcccag gcacgccgac
    11101 cattctctat atcaaaaatg gtcaagtgtt agctggttgg gtcggtggcg gtatcagtgc
    11161 ccaggaactc tatgattact tttatctagg aaagactcct ccacagttag tagctggtga
    11221 ggagcaggct ccaagtgcaa ctgacgaaca agcccctgtg gaaacagctc tgccgactac
    11281 tcaagaagtt ccgcaaggtg agcaagcttc tcaggacagg caagaagctc caaaagaaca
    11341 agggtctcct caggaagtag agacggcacc aaaagataca caaccttccc aggaatcaca
    11401 agaggcttcg aagaatgaag cggatgcttc tctcttggag ttgacagaac caaatccttc
    11461 aagagtatct gctgtacgac aggtcaagcc tgttttacca acaagccctg ctcagagtgc
    11521 agggacaaag attcttccga aaacaggcga ggcttcttcg gaaattggtt ggcctatggg
    11581 cttactgact ctcatgctcg ctcttgtcat acaaggatta gcgattattc ataaggaggc
    11641 tgaataatga aacgtttgaa aaaaattgcc ctatttgttg gcttgatcct attaacgatt
    11701 gtttttaatc tacttcccat gctcttcatc gggcaagagg cacagactcc tgtcgcaatg
    11761 aaatgggtgt ttagtattgc ctatctcgct ttggttggtt ttctaatttt cttgattgga
    11821 aagcggtata gacagcaggt aaccgagacg gttagggagt tacggtttac ttggaaagac
    11881 tttgggattg ctctgctatt tttcctagca acccgtgtcg tcgcagtttt ggggaccttg
    11941 ctggtacaga taggtactgg gaataccatg tctgctaatg atgcggccct gtttgcgacc
    12001 agtgagcagg tagcgactat gtttcctctc tatttcatag cttttcatgt agctattggt
    12061 ctgtttgcac cggttatgga agagattgtc tttcgaggat tcttcagtca atactttttc
    12121 aaggctggca ataagtggtt gaaattggtg attagttcta gcattttcgc cctctttcat
    12181 atcgtatatc cgatcgaatt tgtgacctac ttcgctttgg gagctatttt ctacttggcc
    12241 tacgcacgtc gtggaagtat caaggatgcg attgctgttc atattttgaa taatagtctc
    12301 cttgtcttgt tttcagttat caattatcta atcatcttat ttggatagaa gggaggagtt
    12361 ggctatgaaa gaattatcca aggctcagct tgtgagcatc ataggcggag ggcaattatc
    12421 cagtcttatc ggtcttccta tagttgtcaa gggaccagga cgggaaattc ctaaaccacg
    12481 ccctgtgcag ccacctgcgg aaatcatgta ggctattaaa cgagtaaagc acctctggtt
    12541 atccaaaggt gcttttgaaa ttatttgaaa aactcgaaaa aaacagtaaa atagagtacg
    12601 gaggtttata tgaacatcag agaataccaa accagcgatg aaaaaggctg ggtttattgc
    12661 aaggcactca gctatctctt ttccccgttt tttgacgata gagagacgga aaaaccagca
    12721 ctgctgacgg acatttatga taagaggatt gaactggtgg ctgaaagtga cgaccagatt
    12781 gtcggcttga ttgacatcga catttacagt caggaaacca gccaaaccta cctctatgct
    12841 cccagccaac gtacagctta cctgaccaat ctcgctgtcc accccgatta ccagggacaa
    12901 ggcattgccc aggcccttta tgaaaaagca gagcaggcat tgaaagaagc tggagtagaa
    12961 aagctcgcta tatttacccg agatggagat gctgccaacc atttgtataa aaaatgggga
    13021 ggacagctga tttgtactga ttacctagtc atcggtacac ccaaagacac accttatgtc
    13081 cgctttggtg tcgatcttcc caatgccaaa ttggccttta cagatgaagc aggtcagcca
    13141 gaaccctact atctccgaga aggtgtctat gtcgtgaccg accaagcaga tttagaactg
    13201 tttgatatcg aagaagtcta tcaggaactg acctatgtgg tggatttggt ctaatgacct
    13261 ctgcggacta atttagttct accaatttgt ttttacagct gaaattttta tagggctgtc
    13321 actccaatat ctcattccgt agcaaatatt cgcattctct tttcttttgg tgtagaatga
    13381 aggtagaaag cagaaaagga gacgaatatg gtacaagtag taacagacgc aaactttgaa
    13441 gtagaaacgc aagaaggtgt cgtccttgta gatttctggg caccttggtg tggcccttgc
    13501 cgtatgcaag caccaatctt ggaacagttg gcagaagaat tggacgaaga cgagctccgc
    13561 atctacaaaa tggacgtaga tgaaaaccca aatacagccc gtcaattcgg catcatgtct
    13621 atcccaaccc tcttgttcaa aaaagacgga caggtggtca agcaagtagc aggtgtgcat
    13681 acaaaagacc aaattaaagc gatcttggca gaaattggtt aattatgtag gttgaggaaa
    13741 ctcaaccttt ttctgcatcg aaaggaatct cacatgaaag aaatttacct agcaggcggt
    13801 tgtttctggg ggatggaagg ctacttttcc cagatcgatg gtattcttga caccagcgtt
    13861 ggctatgcca atggacaggt ggagacgacc aattatcaac tcctcaaaca aacagaccac
    13921 gcagagacgc tctatctagc ctatgatgag gctcgtatca atttgcggga aattctcctc
    13981 tattatttcc gcgtcattga tcccttctct gtcaatcagc aggggcctga caagggtcgc
    14041 cagtatcgga ctggtatcta ttacacagat aaggctgatt tgccgaccat cgagcaggtc
    14101 atgacggagc agtcccagct ctttggcgga cgccccctag ccgttgaagt ggagccactc
    14161 gcgcattaca ttcccgccga agactaccat caggattatc tcaagaaaaa tccccaaggg
    14221 tactgccata tcgatcttgg gcaggcaaaa atccctctga ttgatgttgc agactaccaa
    14281 aagccagatc aacaagtctt aaaagacagc ttgaccgacc tccagtatca agtcactcaa
    14341 gaagctgcga cggaaagacc ttttgaaaat gagttttgga atagcgacca agctggcatc
    14401 tacgtcgata ttacgactgg tgagcccctc tttctctcga cggacaaatt tgactcaggt
    14461 tgtggctggc cctcctttac caaaccaatc agcaaggaag ttgcgactta tttccaagat
    14521 ctttcccacg gcatgaaccg cattgaagtc cgcagtcggg caggtcatgc tcatctaggc
    14581 catgtctttg atgacggacc gcgtgacaag ggtggattac gttactgtat caactcagca
    14641 gcccttcgct tcataccgag agaagaaatg gaagaagcag gatatgtctt gtttttggat
    14701 ttgcttaaat aaatttagga acgtagaaag tctattcgca aagaataggc tttttgtgtc
    14761 gaaatagtat atttaaacat ataattttga tataatgaat tatgtataga taatatttta
    14821 gttgaagaag tggctatttt gctgtcaatc aaccagtgcg ctgagatatt aaagcgaact
    14881 ctgagcagag acattggaat tttttcctag cctatttctt acattttaga gaataggaag
    14941 acaggtgatt ttgatgaaag gaaaatttgt acttgtatcg acgatcattc tagccgtctt
    15001 tatgatttgg ttgggcgtca gtcaaaagga gactatgcta gttcattatt atccttctgt
    15061 gactgccttg tcggtatctg aggacgtgac ttactcagat gtacgacagc gattagagga
    15121 atattctcaa cagacggata gtgtcattgc cagacgagtg attgagccaa gtacatcagg
    15181 cggacgtacc ttttcttatg ataattttag tcaatctccc ctaccaagag gactagagga
    15241 atttcagtca tcagaaaaag tggagtctac acttttaacc aaatatttta ttttccaagg
    15301 gaaagcgacg gtagaggagc tttgttctct tcttgtttcg cttggatttg atgaagttca
    15361 gattcggaag ccatcgacta ttgctacttt actagcattt ctgacacaag gtggtcaatt
    15421 cttagccgta ctggtctttc ttattaccta tatggctttg gtcgtgattg ccaatgtaag
    15481 gcagttgcgt acagcaggta tccgtttgat tgcaggagat tcacgttggc atttatttct
    15541 actatctcta caggaaaatg cgaaagagat agctctaact atcccatttg tggttcttcc
    15601 agcagttgga ctggcctacc tcattgggtt agatggctat tctgtctact atctggtcgc
    15661 agctctagtg ggctatcatt tcttgcttgg tttgattgtc ctttttttcg ctgctacatt
    15721 taccttggcc attcggacct atcacttttt acccttgtta aaagggaaga tgcccctgca
    15781 aggaatcctg accattatgg ttatggggca aatgctggct ctactggtgg tgtcattggg
    15841 tgtggctcaa accgtctatt attcagggat ttggcaggaa taccaagtag gtgcccagca
    15901 gtgggagaat gaaggggatt actatagttt agcttggaat atttcggcgg atggtcgctc
    15961 aggactaaat tcgcctgaaa attggtatcc tttactaaag caagctttgg aggaagacgg
    16021 cgctctcttt gtcaaaagta atttgaatgc ctatttaatg ggctcccaac tggaagatgg
    16081 gacacgcctt gacagctacc atccagcagg caacaccctc tacgttagtc caaattattt
    16141 gcagatacag gatgtagact tagcagaagg agaagtagcg ctccctctac aagaaggaga
    16201 atttcaactt ctgttgcctg aaaaattgcg ccctgaaagc gatacttatc tccatcttta
    16261 ccaagattat atcaatcgta tggttagacc tgctaatcaa gcacgctcag ctactattaa
    16321 gggaaaagtt gcctatttaa aagatgggca gaagcagttt atctacaatc atcgttctgg
    16381 tcaacatgtg caatacctga cagaccctat tttagttgtg ctggcaccgt caagtctggg
    16441 aaaagaatct gctgactttt ggttgaatga agtagatagc agtatcttat ttaaaaatag
    16501 agataaactt ttgcgcgaat tgaaggcaag aaatctgttt cagtttgtca atgaagtgaa
    16561 aagtagttct tccctcttta cggaactttt agatcgtatt cggatagaga ccatttcaac
    16621 atctatgggt gccattttag ggattgtgac atcaattgtc ctgtttaata ccatgaatct
    16681 tctatacttt gaagaattta aacgtgagat tttcatcaag gaaattgcag ggatggattt
    16741 cttgggcatt cataagaaat acctaacgtt ccaactgctt tcccttttat tagccttggg
    16801 agcgagtgta gtagtaacag gtcacatttt tataagtagc atcagttttg ccatgtttat
    16861 aatcaatgcc ctttacttat tgaggtggca ggcgaggaaa gacggagctt ggaatatccg
    16921 tattttgaaa ggagcctagt atgttttcta tccaatcaat tcaaaagaaa tttgggaagc
    16981 gcagcttgtt ttctgatgta acgctagact tgcaggctgg aaaggtctat gccttgatag
    17041 gtgccagtgg tagcggaaaa acgaccttgc tgaatatttt agccaagttg gagtcctatg
    17101 atgcaggtga cattctctac aagggaaagg aattgaaaaa gttgaagccc catctctttt
    17161 ttagggagga attaggctat ctctttcaga attttggtct tttagaaagt cagacaatca
    17221 aagaaaatct ggatttggga ctgattggtc agaaattgtc caaagaccaa aggaaatcga
    17281 ggcaggaagc ggcacttgat gcagtgggtt tgtcttatct gaacctgtcc cagcctatct
    17341 atgaactctc aggaggggaa gcccagcggg tagctcttgc taaagtcatc ctgaaaaatc
    17401 ctccattgat tttagcagat gagccgacgg ctgccttaga tcctaagagc tcccaagaaa
    17461 ttatggatat tttgctatcc ttgaagagcc cagatcggtt aattgtgatt gccacccaca
    17521 atcctttgat ttgggagcga gcagacctta tcataaaaat ggaagacttg taaaaattca
    17581 tactcttcga aaatcaaaat tatccgttat caacttacct tgatgaactc cagttctatc
    17641 ttcggattcg tttcctaggc tactttttat tttcattgag tatcagaaaa tattcttgat
    17701 tttttcgtga aattagatta aaataaaact agataaaact gaataaccgg ttgatattgg
    17761 gtagaaggga aactgactgt tcaatggacg gaactctgga gagaccattt tggcaccgaa
    17821 ggggcaaggt agtcctgctt gaaaaagtag agctactgaa actctcaggt aaaaggacag
    17881 agcgttgaaa aataggcttt ttctatattt tcacgttgat tctagaggtt gaagtgttca
    17941 gcctcttttt gtttttccgg cagctttatc ggattagaaa cgcttaggag gaactatgtt
    18001 agaactattt aaggctatca acaatcttgt ttggggaccg cccctcttgt tactattggt
    18061 cggaacgggt gtttatctca ctcttcgttt gggagtattt cagattggca aattgccgac
    18121 ggcttttcgt ctgattttct ccagtgacca gtctggacag ggagatgtgt ccagctttgc
    18181 ggcactttgt acagctttgg cagcgacagt tggtacagga aatattgtcg gagttgcgac
    18241 agctattact acaggtggtc ctggggctct tttctggatg tgggttgcgg cctttttcgg
    18301 aatggcaacc aagtatgcgg aaggcttttt ggccattaaa taccgtacca aggatgcaaa
    18361 cggacaagcg gctggtggtc ctatgcacta catcaccttg gggatgggac aaaagtggaa
    18421 acctttggcg atcttctttg ctatttcagg tgttttggtt gctcttttgg ggattggaac
    18481 tttttcgcaa gttaattcca tcactgcttc tttggaaacg agttttggat tagctcccca
    18541 gttggttagc attgtgacag ctatttcaat tgctttcttt atctttggtg ggattgaaaa
    18601 aatctctgac gtttcaacta agattgttcc ttttatggcg attttgtata tcttggctag
    18661 tgttattgtc ttggctatgc actttgacca gattttaccg actcttgctt tggttcttaa
    18721 atctgctttt tcaccggcgg ctgcagctgg gggatttgct ggtgcgacgg tacaacaggc
    18781 cattcaacgg gggattgctc gcggagtctt ctccaatgaa tctggtttgg gttcggcgcc
    18841 tattgcggca gctgcagcca agtcagataa tccagttgaa cagggcttga tttctatgac
    18901 gggtaccttt attgatacac ttatcatctg taccttaacg ggttttacga ttctagtaac
    18961 tgaccagtgg tcggtagagg gcttggcagg tgctcctctg actcaggcag cttttgcaac
    19021 agtttttggc aatacaggat ctattgcctt gacgattagt ttggtacttt ttgcttttac
    19081 aactattctc ggatggtctt actatggtga acgctgtatc gagtttctat ttggtaccaa
    19141 gtcaatcttg ccttatcgtc tgttatttgt ggcaatggta gcccttggtg gtttcctcaa
    19201 gctggacttg atttggacca ttgccgatat tgtaaatggt ctcatggccc taccaaactt
    19261 gattgcctta ctggctctct ctcctgtcat catcaaggag acacgccagt attttgcaaa
    19321 gaagaaataa gataaaagac agtcgtttgg ctgtcttttt gttcttttag gatgttttct
    19381 gctataatta tctcatgaat gattttatta ccaagtattt gtctcaattt aatattgagg
    19441 ccattgtgac agcaggtcta aataaggttt tatcgcttgt tttactcttt gttgcatttt
    19501 acattatcaa gaagatagcc aaatcttctg tgaaaaaggt tttggttccc tctctaaagg
    19561 tatctacaca agacattggt cgtcagaaga ccatcagtcg tctggtggaa agcatcctaa
    19621 attacctact ctactttatc cttatctact gtattttgag tatcctcggt ttaccggtat
    19681 ccagtcttct tgcaggagcc gggattgctg gggtagctgt tgggctgggc gcacaaggtt
    19741 ttctctcaga cttggtcaat ggattcttta tcttaattga acgacagttt gacgttggag
    19801 atgtggttaa gttaaccaac gggcccatta ccatttcagg aaccatcgtt agcatgggaa
    19861 tccgaacaac acaagtacgt gatgcagatg ggacattgca ttttattccc aatcgcaaca
    19921 ttctagtggt gtccaatcag tcaagagggg acatgcgtgc tcaaattgat attccgctca
    19981 aatttaatac cgatttggaa caagtctatc acgtaataga agaggtcaat ttgagagaaa
    20041 tcagcaattt tgaccagatt acaggtgtga cagttcttgg accgcaaaat acgaccaatg
    20101 gtcagtttgt tttccgggtc aatctctttg tagcaaacgg tcaacagaac aagatctatc
    20161 atcaattctt tggtttttat caagatgccc tgcgtcaagc aggaatagat ttaccttcaa
    20221 gtgggccaac tgttttaaaa taaggagttt atgatgcaaa caaaagattt tgtcgttgaa
    20281 aatgggcaga tgtattataa gaagaaaccc ttgcacaaac agcctctctt ttggacaacc
    20341 attgctggtg ccgttctctc ctttatccta ggagtaacct gttttatttt tatgatcggt
    20401 ttaagcttgt caggtacaag tgattcttgg gattcagagg gttatttcga tgatacgaag
    20461 acctacacag aatatcaagt gggagatggt gttgattttt ctgatggtct tcatgtgaca
    20521 gtaacgtcta tgggcaaaga cgatagcgta gaactagtag atagctacta tagcacagct
    20581 tatgttgttg aaatggaagt tgagaattcg accgcagaag aactctattt tgatgaatac
    20641 tatttcagtc tcatggatcc cgttagtcag attcccttta ctctggattt acggacctac
    20701 gatgtgaatc tagttgaaaa gttgaagcca ggagagaaag tacaagtaaa acttatctac
    20761 ggtatagata atgaaacaaa ctttggtttt acctacgaag atgccatgtg gacggaatta
    20821 gtcgcagaag gtatctaatt gctgtagaaa aagttttaaa tatagcacaa ttttgcgggt
    20881 ttatatgccc cttggttcag attgttcggc ttggtaattg tactatatcc gacctatctg
    20941 ttatttttac attttaaaaa ggagaacatg tttatccact gttctcctct tcttttaatg
    21001 aaaaataccc ccaaaattgg cacgtcaatt ttgggggcgt ttttattata gtttagtaaa
    21061 ctaaaagtaa gcttatacca aaccttgggc aatcatgcta tccgcaattt gctcaaaggc
    21121 tgcgatgtta gcacctgcga ggtagtctgt accaaggtcg tatttttcag cagtttcttt
    21181 ggctgtgttg aagatatttg ccatgatgtc tttaagacgg ccgtctactt cttcacgagt
    21241 ccatgaaaga cgaaggctgt tttggctcat ttcaagggca gatacggcta caccaccagc
    21301 gttggcagct tttgcaagac cgtaaagaac gccgttttct ttataaactt tgatagcatt
    21361 aaggtcagat ggcatgttgg caccttcagc cacacagtaa acgccattct tcacaagggc
    21421 agcagcttga tcgccgttga tttcgttttg agtcgcacat ggaagggcaa tatcagcctt
    21481 gccgtcgtag ttccatacag aaccttcgaa gtacttagca gttgcttttt ctgcggcgta
    21541 ttctgtcaaa cgagcgcgac gtttttcttt gatgtccacc aagaggtcga agtcgatacc
    21601 agtttcgtca atgatgtaac catttgagtc tgaaacagaa ataacttttg caccaagttc
    21661 agtcgctttt tgaacagcat attgggcaac gttaccagaa cctgagataa ggacagtttg
    21721 gtctttgaag gatttaccgt ttgctgccaa catgttatca gtgaagtaaa ccaaaccgta
    21781 accagttgct tctgggcgga tcaatgaacc accaaagcca agaggtttac cagtcaagac
    21841 accagcatca aattgacgta ggcgtttgta ttgaccatat aagtaaccaa tttcacgtcc
    21901 accaacaccg atatcaccag cagggacgtc aagtgaaggt ccgatgtgtt tttgcaattc
    21961 agtcatgaag ctttggcaga agcgcatgat ttcagcatca gtttttcctt taggatcaaa
    22021 gtctgaacca cctttaccac cgccgattgg aagaccagtc aagacgtttt tgaagatttg
    22081 ctcaaaaccg aggaacttca agatggattg gtttacagtt gggtggaagc gaaggccgcc
    22141 cttgtaagga cctacagctg agttgaactg aacacggtag ccacggttga cttgaatatt
    22201 tccatcttta tctgtccatg gaacacggaa gctgatgata cgttcaggct caacaatacg
    22261 ggccaagatg ttttctttga tgtattctgg gtgtgcttca aaaacaggct caagtgtaga
    22321 gaagagctct tctacagctt ggaggaattc tgtttcatgt gggttgcggg ctttgactgc
    22381 ttcaaaagaa gcttggatgt aagctttggc atttgacatg ggatcacctg atttcttttt
    22441 tatttattaa attgtcagac aatttaattt atctgataat tattatagca ccatgatttt
    22501 taaatgtaaa gaagaaaacg taagaatttt aaaaaaatta ataaattttt attaaaaaat
    22561 ccgaacgtta gtagtaaatg aagaaaatcc gtttgtttct tatgatataa tcaagaaaga
    22621 atgacctata tggaggataa tatggtttca acagcaacga cactcggtgg atttaccttt
    22681 gataattgtt tgatgaatgc ggcaggggtt tggtgcatga ccaaggaaga attggatgcg
    22741 gttaagaact cgaaggcggg tacttttgtg acaaaaacag caaccttgga ctaccgcgcg
    22801 ggtaatccag aaccacgtta tcagaatgtt ccgcttggtt ctatcaattc gatgggcttg
    22861 ccaaatcagg gcttggctta ctatttggat tatctactag aattgcagga aacggagcca
    22921 gaacgcacat ttgttttatc tgtagttgga atgtcgcctg atgagactca tgaaattttg
    22981 agaactgtag aagccagtga ttttaagggg ctgacagagt taaatctttc ttgtcccaat
    23041 gtccctggaa aaccgcagat tgcctatgat tttgaaacga cagagaccat cttgcaggaa
    23101 gtcttcactt actttaccaa accactcggt attaagttac caccttattt cgatattgtg
    23161 cattttgacc aggcagccgc gattttcaac cagtttcctt tgaagtttgt caactgtgtc
    23221 aactctattg gaaatggtct atatattgaa gacgagcagg ggtcattaag cctaaaaatg
    23281 gttttggagg tataggcggt gaatatatca aaccgacagc cttggcaaat gtccatgcct
    23341 tctaccaacg cttgaatcct gaaattcaga ttgttgggac tggtggggtc ttgacaggac
    23401 gtgatgcttt cgaacacatt ctctgtggag ccagcatggt ccaagttgga acaaccctgc
    23461 aaaaggaagg tgtggcagcc tttgaacgca ttacggctga attgcaggcc atcatggctg
    23521 aaaaaggcta cgagaccatt gaagattttt gtggcaagct acagcactta gatgattgag
    23581 aacatctgtt gaagacataa aaagaagcta acattgtacc gttctcccag atagtctttt
    23641 agggggtcac gaggtgataa tgttagctct ttttaaatgg tctgtgaaga tcggtctgat
    23701 aatcgtttga ggaatggaag acatagtcgg aaacatatat ttgtgagatg gaattctgat
    23761 tttatttaga ttttttagca aaaatgtcgt atactaatat tagaacctct atttataagt
    23821 gatgtacttt tatggaagaa atagtttttt gagggactac tgactgtatt ttgaacaaag
    23881 gttcttaagt agggagtatg agggtaaagg tatggtgaaa agggcgaact atattcgcag
    23941 aaaacgatat gcgtcctatc ggacaaagat gcatttgttt tttatttgtg gcttagcgac
    24001 tattatcttg gcgattatta ttgtaagcga gcacctagtt cctaggctga atcaggcatc
    24061 agaatcaatg cattcagata attctgttcg catcatggct catggggatt tgctctatca
    24121 cttgcctatt cttcgaggag cagaacagcc agatggaagt tacgattttt ctgagaattt
    24181 tacctacgta aagccctgga tagaacaggc tgatttcgct atcgcagact ttgaagggac
    24241 catttcccca gatgtcgaat tagcaggtta cccacttttt aatgcgcctg ccattgtcgc
    24301 caacaatatc catgatgcag gctacgattt ggtggactta gcccacaatc atattttgga
    24361 ctcacatcta tcagggctaa tttccactgt caatacattt agagatgcag gtgtggatac
    24421 agtcggtgtc tacgcagaag gcaatcgggc aactgcacca ctctacattc gagaagtcaa
    24481 tggtatccgt atagctgtcc tagcctatgc ttacggtttc aacgggatgg aggctttgct
    24541 gagtcaggag gaatatgatg cctatttatc ggattttgat aaagaaaaga tgcaggctga
    24601 gattgaacga gcagaaaaag aggcggatat taccatcgtc atgcctcaga cgggtgtgga
    24661 ataccagttg gagcctacgg aggaacagac cagtttgtac catcaaatga ttgattgggg
    24721 agcagacatc gttcttggtg ggcatccgca tgtagtcgag cccgcagaga ttattgaaaa
    24781 agatggccag agaaaattga ttatctattc gatggggaat ttcctgtcca atcagcgtat
    24841 tgagagtatg gatgatacac caaattccca atggaccgag cggggtgtct tgatggatat
    24901 caggattcag aaagagaacg ggcagacaag tattcggaca gcccaagcgc atccaacctg
    24961 ggtgaatcgt atctctcagg gaacgtattc actagatgga tatgagcgtt ttagctatca
    25021 gacctatgta ttggaagact gggtcgctgg tggtcgatac tatggacaat tggatctaga
    25081 tacacaggcg cgtgtggata cagcctatca agaaatgaaa gactttgtca atttggtatg
    25141 gtggggagag agaagatgac agttcgatta attgcaacag aaatcggaat aaggaaattg
    25201 atacaataga atacaaagaa agccttggaa tgagctgttt ccaaggcttt tttcttgtct
    25261 aatggtataa gtgaatagtt gttaaagtgg ttgtttttta ttgagacacc cttgatttgt
    25321 atatcgttaa aaggtaaaga atgatttcac ttattctttg ttgactagtt tatcaagatg
    25381 atcggtgtag tgtaatttta acttgtattc acctaaaata tcaagaactt gtatggcttg
    25441 tttcatcttt tcaattccag tacctgattg ttgcttaaat tcaaagtaac ccctggcata
    25501 taggaaaact gtctgttcat aaaagtttaa ttcattgtcc aacaattctt ttatcttttc
    25561 aattaaatag gagcagttag aatattcttc cttatcgata ctaagaataa aacaattgat
    25621 agctagttga gtgacaatac gcttattggt tttattcaga gatgagtaaa tgtaattgtt
    25681 taacatttct ttggttaata agaagtagga gttgtagtta attgtgcgta cacagttccc
    25741 taataaaata atctcatagt aaccccattt ttcaactttg aagagatagt ctgtcagttg
    25801 aagcaattct tcatctgatg gaataatact tgagtccatt gtgtttaaaa tggactttac
    25861 cattgttttc tccaaagaat ttaaggtata atttgaggaa tccgaaagta gagattgtat
    25921 attattgatg ttttgtgatg aatattgttt acggatatac tgtactaagt tagcaaatga
    25981 ctcagtttta gtatcgtctt gattatgtaa aatcagaaac tcatccaaag taatatgtaa
    26041 tttatctaaa atattgatta gtcgaataca ggaaatctca gactctccac gctcaaaacg
    26101 agagatttgt gattttgaaa ggtgtgcatc tgctacggag cacagactaa tttgctttcc
    26161 tttacgaact tttctaagtg tgacaccaag ttttgatttc ataatttccc actttcccaa
    26221 caaaaattaa
//
LOCUS       DASFQS010000018        26023 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.018, whole genome shotgun sequence.
ACCESSION   DASFQS010000018 DASFQS010000000
VERSION     DASFQS010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 26023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26023
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.018"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..3575)
                     /locus_tag="U1041_000701"
     CDS             complement(<1..3575)
                     /locus_tag="U1041_000701"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4767827.1"
                     /translation="MNRSKKKSFDWYGARQRFSIRKYHIGAASVLLGTTLVLGTGTIV
                     GAETGVNGDGVSNEQIVPVSNDGISDGTQPQGDNQGVNSSGVQTGNTTNSTANVQPAG
                     DTGSASSQPVGSSRSADTGTQGDGSTNQPVDEPVIKFPTQDDQRQPAGYQKVEFSTYL
                     STLVFEGKPGEIKNGNSKKVVFWVKTGTTWGALKRDPQFRMPKYTVGDGDFILGYARS
                     VGGKVQYIDFDSLNDTPIVDTWQINTVVDYIVGEVDDGKTFEEYMNSGSYASYHIPQF
                     HGITLDANGGTIDGKEKKAFYVAYQHVQWGDPLVTKKIVDPSRDGYTFVRWQTNTGEG
                     IPTSGQIETTEFSAVWLKHPEEKVAVFDRTNLTTSEKEQVKQKIYDANPDLSTGVPQV
                     IKAIEISDTGEATVTFDDGTAVKVPSATLTNEDKATARSNAKAEIEKDAMEKSAAINA
                     SNLTEEEKRARLTEVRDVQDRADIAIDNAATTEDLTKAISDGTAAIEAVSTTSTIKTK
                     AKEALEEAYNTKKDEIDNSSLTAEEKSAKQEELDQAKSAADSAIDTATDDAGVGTALN
                     KGKADIEAIGTIISDKKIAARQQLEDAYSAKETEITNSNLTLEEKATKLAELDKAKEV
                     AENAIDTATDNAGVDTALTNGQSAISGIDTSSSAKKAQAKQDLEKAYNAEKAEIENSV
                     LTVDEKATKQAELTTAKEKAIKAVDDATTDSAVEGALKNGKATIESTYTAVIKFPSST
                     SETAPEGYVTVTFNKSPWDKGLTLGNQSGNSVRIFVKNDVTWATLLSDPAWQWPTVNT
                     NSGDIVVGWGSHTNYSASVAFVYDKMKDQVVRNTQLWPNVVYEVEDVHSTIDAYLKQY
                     GADEQDKWLFVTFDAGQGATLKGTTNQSKSVAVYYQNIGYDNSLFTKKVVNGVLANHT
                     FVRWQTADGKVLPTSGTITSTEVYNALYLSHPTDKTTVFDANKLTETEKDSLKQAISN
                     ANPTSANLIQSITVSDTGEATVTYNDGTVVTVPASHLINEDKAPARNLAKEEIDKASK
                     EKVAEINASALTDEEKAAKLTEVQEAKDRANNAIDNATTTENLTKALEDGKSEINAIN
                     TTTSAEKVAAKQTLEDTYNAKKDAITNSGLTAEEKDAKQAELDKAKEDADKAIDAATD
                     NAGVDTALEAGKTAIAGIDTSTSPKKAAAKEELKAAAEDAKKAIDA"
     gene            complement(4301..4960)
                     /locus_tag="U1041_000702"
     CDS             complement(4301..4960)
                     /locus_tag="U1041_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4767828.1"
                     /translation="MFLRASGRQAVRFIEPEHLKQFLDYAEQLASRNFTKYYQYVIFK
                     LLLATGCRIGELSALELSDIDLEAGTISISKTYSMELHIIGTTKTKAGTRIISIDKKT
                     VLLLKQYQNRQRLMFLEVGACAPGVVFATTLREYLPRVSLQEVINCRCKALGIPRFTC
                     HAFRHTHASLLLNAGITYKELQYRIGHSNIAMTLDTYGHLSKDKEKEAVLYYEKAMNS
                     L"
     gene            4937..5212
                     /locus_tag="U1041_000703"
                     /pseudo
     CDS             4937..5212
                     /locus_tag="U1041_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941794.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ArpU family transcriptional regulator"
     gene            5381..5572
                     /locus_tag="U1041_000704"
     CDS             5381..5572
                     /locus_tag="U1041_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HEM4767829.1"
                     /translation="MPLTGKEMAKLAEANGWKEIRVNGSHHHFKKEGFSKIVTIPVHG
                     NKDLGKGLEKKILRDLGLL"
     gene            5608..5985
                     /locus_tag="U1041_000705"
     CDS             5608..5985
                     /locus_tag="U1041_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002282907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEM4767830.1"
                     /translation="MLKSYPAIFHKDEQGYWVEFPEFSGGTQGDNLEEAMYNAREFLE
                     SSIALYIDEGMELPKASDIKELSAPDGFVSMIQADPTPYIKNNKAIRKNVTVPEWLTK
                     LADREGLNYSEILTTALETRLQV"
     gene            complement(6307..8574)
                     /gene="glgP"
                     /locus_tag="U1041_000706"
     CDS             complement(6307..8574)
                     /gene="glgP"
                     /locus_tag="U1041_000706"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HEM4767831.1"
                     /translation="MINLQNFVQSMYAKRIEDCTDQELYYALLAFTKQQSEAKYTNDQ
                     KKKVYYISAEFLIGKLLSNNLINLGLYDEVKSQLVAAGKDLIAIEDMELEPSLGNGGL
                     GRLAACFLDSIASLGLNGDGVGLNYHFGLFRQLFEYHQQSAAPNEWITPRSWLTESPI
                     SYQVPFANFTLTSKLYDIDVPGYKTERKNRLRLFDLGSVDDNIIYDGIEFDKEDIFRN
                     LTLFLYPDDSTDEGKVLRIFQQYFMVSNAAQLLIDEAVAKGSNLHDLPDYAVVQINDT
                     HPSLVIPELIRLLELRGISFDEAIEIVKKMTAYTNHTILSEALEKWPLDFLNRVVPHL
                     VPFIVELDRRAKEVKDDPAVNIIDEHGRVHMAHMDIHYGYSINGVAALHTEILKTSEL
                     KAFYELYPEKFNNKTNGITFRRWLMHANPSLASYLDGLLGHGYHHDASELEKLLEYKN
                     DKELKSWLEKTKQHNKRKLQRHIAKTQGVEVNPESIFDVQIKRMHEYKRQQMNVLYVI
                     HKYLDIKAGNIPARPLTVFFGGKAAPAYTTAQDIIHLILVLSQVIKNDPEVAPHLQLV
                     MIENYNVTEASFIIPAADISEQISLASKEASGTGNMKFMLNGALTIGTDDGANVEIHE
                     LVGDENIYIFGQDSQTVIDHYANGTYHPYALYEREAIRPLIDFITSDTIRQAGGIDER
                     LWRLQDNLKHNDHFMTLLDLEDYIVTKERMLADYEDRDSWLDKVIVNIAKAGFFSSDR
                     TIQQYNEDIWHLEAK"
     gene            complement(8752..9465)
                     /gene="deoD"
                     /locus_tag="U1041_000707"
     CDS             complement(8752..9465)
                     /gene="deoD"
                     /locus_tag="U1041_000707"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007519526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM4767832.1"
                     /translation="MSIHISAKPGEIADKILLPGDPLRAKFIAENFLEDAVCFNEVRN
                     MFGYTGTYKGHRVSVMGTGMGMPSISIYAHELINDYGVKKLIRVGTAGSLNKDVHVRE
                     LVLAQAAATNSRMINIDWPEYDLPQIADFGLLDKAYHIAKELNLTTHVGNVLSSDSFY
                     SPKLFSRNLELGQLGVKAVEMEAAALYYLGAKFGVQTLAIMTISDSLVNPEEDTTAEE
                     RQNTFTDMMKVGLETLIAE"
     gene            complement(9498..10307)
                     /locus_tag="U1041_000708"
     CDS             complement(9498..10307)
                     /locus_tag="U1041_000708"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM4767833.1"
                     /translation="MSLLAKINETKTFLEEKGLVKPEFGLILGSGLGELAQEVENAIV
                     IDYADIPNWGKSTVVGHAGKLVYGDLAGRKVLALQGRFHFYEGNPMEVVTFPVRVMKA
                     LGCEGVIVTNAAGGIGYGPGTLMAITDHINMTGQNPLIGENLEEFGPRFPDMSNAYTK
                     EYREKAHAIAEKLGIKLDDGVYLGVTGPTYETPAEILAFKTMGAHAVGMSTVPEVIVA
                     AHSGMKVLGISAITNFAAGFQSELNHEEVVEVTEQIKGNFKGLVKAILAEL"
     gene            complement(10319..10675)
                     /locus_tag="U1041_000709"
     CDS             complement(10319..10675)
                     /locus_tag="U1041_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HEM4767834.1"
                     /translation="MEKLTVYINPDCSKCKKLRILLSSQGMEVKWVNYLETPLRGAEL
                     TALLEKMGSQPSAVTRLKEEERLALSEEEIFECLVKEPATLNRPIIEREQTAFLCRPL
                     EIIKEKMPEYDWSDYL"
     gene            complement(10675..11886)
                     /locus_tag="U1041_000710"
     CDS             complement(10675..11886)
                     /locus_tag="U1041_000710"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEM4767835.1"
                     /translation="MPKFKRVHLVVMDSVGIGAAPDSDKFFNAGVADTESDTLGHISE
                     KAGLAVPNMAKIGLGNIPRDTALATVPTEENPTGYVTKLEEVSLGKDTMTGHWEIMGL
                     NITEPFDTFWDGFPEEILTKIEEFSGRKIIREANKPYSGTAVIDDFGPRQMETGELIV
                     YTSADPVLQIAAHEDIIPLDELYRICEYARSITLERPALLGRIIARPYVGEPGNFSRT
                     ANRHDYAVSPFEETVLNKLADAGVPTYSVGKISDIFNGSGITNDMGHTKSNMHGVDVL
                     IDTLKLSDFEEGFSFTNLVDFDAVYGHRRNIEGYRDCLQEFDARIPEIIDNMREDDLL
                     LITADHGNDPSYAGTDHTREYVPLLAYSKAFKGSGVLPVGHFADISATVAENFGVDTA
                     MIGESFLEKLV"
     gene            complement(12214..12888)
                     /gene="rpiA"
                     /locus_tag="U1041_000711"
     CDS             complement(12214..12888)
                     /gene="rpiA"
                     /locus_tag="U1041_000711"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEM4767836.1"
                     /translation="MTNLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVQEIGRRVAEE
                     GLQITGVTTSHATAEHAASLGIPLKNIDEVEYVDLTVDGADEVDGDFNGIKGGGAALL
                     MEKVVAVNSKDCIWIVDESKMVQTLGAFKLPVEVVQYGAENLFRLFEKKGYRPSFRMR
                     NGEKHITDMQNFIIDLDLRRIEDTYALAEELDRTVGVVEHGLFIGLISKVIVGTQEGP
                     NIIEKK"
     gene            complement(12967..14562)
                     /locus_tag="U1041_000712"
     CDS             complement(12967..14562)
                     /locus_tag="U1041_000712"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEM4767837.1"
                     /translation="MNNSNNSQSLYQSLWNAADILRGKMDANEYKSYLLGLIFYKYLS
                     DKLLLAVCDNLDESFDSLSQAQRLYEENFADPDVKEDLLDVLDDELGYFIEPGLTFTA
                     LVAKVHTSNFQLEDLAQGFRDIEQSNEIFENLFEDIDLYSKKLGPTPQKQNQVISALI
                     KELHELNLSNHDGDVLGDAYEYLIGQFASDSGKKAGEFYTPQAVSHLMTQIVFLGREH
                     QKGMTLYDPTMGSGSLLLNAKRYSKEASTVSYFGQEINTSTYNLARMNMMLHGVAIEN
                     QKLHVGDTLDADWPTTEPTDFDGVLMNPPYSQKWSGDAGFLQDARFSSYGVLAPKSKA
                     DFAFLLHGFYHLKHSGVMAIVLPHGVLFRGNAEQKIRQHLLEEGAIDTVIGLPANIFY
                     NTSIPTTVIILKKNRTSKDVLFIDASKEFDKGKNQNIMTDDHIAKILKVYQDRQDVDK
                     FAHLASFEEIVENDYNLNIPRYVDTFEEEPVVPLTELADKLAQTDEEIAATTAQLQSM
                     LGQLVGTTPEAQAELTAFLEKLK"
     gene            complement(15070..16254)
                     /locus_tag="U1041_000713"
     CDS             complement(15070..16254)
                     /locus_tag="U1041_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4767838.1"
                     /translation="MKTSNNIPAYRFQGYTDAWELRKLGEVAEIIGGGTPSTSNSEFW
                     DGDIDWYTPAEIGEQIYVDGSERKITQLGLDKSSATLLPANKTILFTSRAGIGKTAIL
                     HSDATTNQGFQSIVVDNNTEPYFIFSMTDKIKNKAISVASGSTFAEISSRALGQLEFM
                     LPSINEQKAIGTFFSTLDRQITLHQRKLDTLKQQKKTYLKLLFPAKGQTKPALRFQGF
                     EDDWKEVKVADIFQVTRGQVLSTNLVSDTKSDEYPYPVYSSQTKNNGLMGFYKDYLFD
                     TAITWTTDGANAGTVRFREGKFYSTNVNGVLLSAEGYSNLAISEILDTVAWKYVSKVG
                     NPKLMNNIMSEIILLIPGGFAEQEVLSSFFQTLDQELAQVEDKLASLKEMKKTLLRKL
                     FV"
     gene            complement(16265..17263)
                     /locus_tag="U1041_000714"
     CDS             complement(16265..17263)
                     /locus_tag="U1041_000714"
                     /inference="COORDINATES: protein motif:HMM:NF025612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriophage abortive infection AbiH family
                     protein"
                     /protein_id="HEM4767839.1"
                     /translation="MDKLFIIGNGFDLAHKLPTSFYDFKRWILDQLDLTETERNEFET
                     GVPFISDFLLPQSMTMPDGGEDFLKDDIFKFFFRLVSQLTEGDWHKFESSLGEIVDLE
                     IDVNTFYDKDGDFDYFQNQYYLEALNNSLLEAILPLKDDLFPNWVQSLPDTEQYLGLQ
                     PIKKTVINNRESLFLTFNYTMVLEEVYQILEERICHIHGSIVDNLFIYGHGQSVLPDD
                     EPEFYRDLTHSMNRLENVLKKPVIEQLNNHQMFFDKLKDIKEIYVIGFNLEDSNTVDR
                     PYFEEIFKRVPQVDIFIDNYKYSEEKERNIKRTLQSWGAKKAHQLRFIDTDTDTVV"
     gene            complement(17268..20270)
                     /locus_tag="U1041_000715"
     CDS             complement(17268..20270)
                     /locus_tag="U1041_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEM4767840.1"
                     /translation="MVDPQALYQTKKPANELQIEDELIRHLISGESQWVYRPELTTEE
                     LLWANFFAKLEANNVRHLADHPLTDQEKHQIKNQLNFVNFYEAAKWLAGENGIAKVQV
                     QREDASLGTIRLEVIWRHNVAGGKSSYEVVNQVVTGGDAARQRRGDVTLLINGLPMIQ
                     IELKSRSHPYMDAFRQIRKYEQEGQFKGIFSSLQMFVVSNITETRYIAAAKETKLNDR
                     FLTKWVDKHNQAQPHLFDFAREVLSIPMAHQLVMQYSVIDDDKKALILLRPYQIHAIE
                     AIREASRLRQSGYIWHTTGSGKTLTSYKVARNLLQIPSIEKTIFVIDRTDLDQQTTSA
                     FLSYAENDMIDIDQTDDTQHLLKNLSSEDRRVVVTTIQKLNTLLRQFEEGLHEKFHQR
                     VKNLNLAFVVDECHRAVTPERQRILEQFFVNSLWYGFTGTPIFKENKREQKGDLAQTT
                     EEQYGPCLHEYTVKEAIHDRAVLGFQVEYQTTMPGWAEDEIEDEFYDDERHMLTVLDA
                     ILNKSKRKLGFQNGVGKTYEGLLTVKSIARAQAYYDLIQEVKAGQKSLTISESVKKVL
                     PDFPKVAITYSVTENDESSFANQDYMSKSLEDYNAMFGTHFTMATLGSYNTDLNERLA
                     RKKDKYAFREEQLDLVIVVDRLLTGFDAPCLSTIFMDRQPMKPQHIIQAFSRTNRLFD
                     EGKKFGQIVTFQTPERFKEKVDEALSLYSNGGEFAVLAPTWLEEKAKFKEKVQQLLAI
                     APNPEMVPDLDASSDAELKRFAKAFQEFDKLFASVQVYADYEQEDLLKEIGLSLEDIE
                     NFSGQYQNVIEELRRRRKDDEGIEDTPFDIEYELESVRTDEINYHYIISLIQNLIDSK
                     NQVIPDKEKKMVDNYIADLDKTNPKLSQLISKIWQEAQTNTQDYKGQSIAHKLDEMID
                     LTIREQVVSTARDWCVGEDELQFIVDNYRVGKDKQIGEKALVDTYDYTSYKENKGDQA
                     LNKLKYKKALKEDYMNMIAEEILPLRGR"
     gene            20937..22310
                     /gene="mnmE"
                     /locus_tag="U1041_000716"
     CDS             20937..22310
                     /gene="mnmE"
                     /locus_tag="U1041_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002906470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEM4767841.1"
                     /translation="MITKEFDTITAISTPLGEGAIGIVRLSGTDAFAIASKVFKGKDL
                     ATVPSHSLNYGHIIDPATGQVLDEVMIGAMRSPKTFTREDVIEINTHGGIAVTNEILQ
                     LLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDVIRAKTDKAMHNAVRQLDGSLSQ
                     LINDTRQEILNTLAQVEVNIDYPEYDDVEEATTELVREKTLQFQALLENLLRTARRGK
                     ILREGIATAIIGRPNVGKSSLLNNLLREEKAIVTDIAGTTRDVIEEYVNIKGVPLKLI
                     DTAGIRETDDIVEKIGVERSKKALEEADLILLVLNASEPLTEQDRNLLAISDMANRIV
                     LLNKTDLEEQIEADQLPEDVIRISVLKNQNINQIEEKINQLFFENAGLVEQDATYLSN
                     SRHISLIEQAVQSLQAVNDGLEMGMPVDLLQVDLTRCWQILGEITGDAAPDELITQLF
                     SQFCLGK"
     gene            22421..23497
                     /locus_tag="U1041_000717"
     CDS             22421..23497
                     /locus_tag="U1041_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767842.1"
                     /translation="MKKIIICIALLSCLVFPFIGWKLYAYQHNKISLTENADFYLVYP
                     GKVEAFQLNGQEPVLLHTQKMNSEGYFGSGKNYILEDRYLVFGNDHQKFIHDNLISID
                     FQDGTVLRKPSKHSTSISGTDGNHFYTAGAYHTLAQFDKQFETRQTHVLNDDFIPNDP
                     VMVDQTSVYLTGFVKDFTQEGPEENVLIVFDKKDFSKQEIFKYDNSIATGDGLLVNGT
                     IYLTIFGKRAPEYEDGQVPNELLTFDTKSKSFSSVTLEPPSPSTLHALKDQNLLLIEH
                     QNGMFSPLSFTIYNTQTGEQSYHTLKDLNPRPHYIDHIRQIDDKRLMIILANQLLIYD
                     METKSIISQTTLSEDYVSGIWINP"
     gene            complement(23529..24110)
                     /locus_tag="U1041_000718"
     CDS             complement(23529..24110)
                     /locus_tag="U1041_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEM4767843.1"
                     /translation="MKKKWLAILIPVFALLFLGMGAIGQYNGLVDSHAEVENAQANVD
                     TQLQRRYDLIPNVVAAVKGAMEHEEEIFTAIADARAKIGSSQVGTSDYNQAQSQLDSA
                     VSRLLVVAENYPQLTANQQVSDLITELEGTENRILVARKDYNAVATAYNKKIKRFPTS
                     LYANLFGYEKVDLFQASTDAATTVPSVDLQDNE"
     gene            complement(24129..24902)
                     /locus_tag="U1041_000719"
     CDS             complement(24129..24902)
                     /locus_tag="U1041_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEM4767844.1"
                     /translation="MKKYLCYLLGFLLLLFSLGQPGLARAEGIPARPIDTTVVDETQL
                     LSSETIANIDQLNQTWAASEQQLQVGVYVTESLSTDIESLANATFRDWQVGFAGTDNG
                     ILLVIAIADREFRIETSDNAATVLTDVEAKDILDNAREFFRQEDYDGGVTYIVQSIGD
                     RFYGTSLGQEQLAAMEERTSAESDSFVWFMIVILVVIIFMIIDKSSRGGGGPGNLLWM
                     LVDDRHHYHNNHSSHSSSSYGGGGWSGGGGGGGGASSGW"
     gene            complement(24960..25538)
                     /locus_tag="U1041_000720"
     CDS             complement(24960..25538)
                     /locus_tag="U1041_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEM4767845.1"
                     /translation="MELADIRQAIIEDVANRDFTNKGIAPLFQAPSTAKILIIGQAPG
                     LKTQEKGRLFDDASGDNLRRWLDVDRQTFYESGHFAILPMDFYYPGKGKSGDLPPRKD
                     FAPKWHPLILDQLPELELTILVGNYAQTYYLEKSQRNLTKRVKHADDYLPTYFPLPHP
                     SPRNNIWQAKNPWFQAEIIPNLQKILMQILEK"
     gene            complement(25525..25983)
                     /locus_tag="U1041_000721"
     CDS             complement(25525..25983)
                     /locus_tag="U1041_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767846.1"
                     /translation="MELKELCFSDMEMVKELFLSVFSQELWNDDWSDEEQLDCYIGDL
                     LGHSRALCFGLFDQEKLIGLSLGYIRNWYEGTEYRIEELCISRHCQGRGIGQDFLKRI
                     EEQLERRQIVHIFLQTERNLSAYSFYKKCGFRALEEDVTMVKKVGHHGTC"
BASE COUNT         7168 a         5740 c         5217 g         7898 t
ORIGIN      
        1 gcgtcaatag ctttcttagc atcttctgct gccgctttaa gttcttcctt agcggctgct
       61 ttcttaggac ttgtgcttgt gtcgattcca gcaatggctg ttttgccagc ttcaagtgct
      121 gtatctacac ctgcattatc tgtcgctgca tcaattgctt tatctgcatc ctctttggct
      181 ttatccaatt ctgcttgttt tgcgtctttt tcttcagctg tcaaacctga attggtaatc
      241 gcatctttct tagcattgta ggtatcttca agagtttgct tagcggctac tttctcagca
      301 cttgtagttg tattgattgc gttaatctct gatttgccat cctcaagagc cttagttaag
      361 ttttcagtag tagtagcatt atcaattgca ttattagctc ggtcttttgc ttcttgaact
      421 tccgtcagtt tggctgcttt ctcctcatca gtaagggcag aagcattgat ttcagcaacc
      481 ttctcttttg atgctttatc aatttcctct ttcgcaagat ttcttgcagg cgctttatct
      541 tcattgatga ggtgtgatgc tggaactgtt acgacagtac cgtcattata ggttactgtt
      601 gcttcacctg tatcagatac ggtaatgctt tgaatgaggt tagcgcttgt tggatttgca
      661 ttggaaatcg cttgttttaa actatccttt tcagtttctg ttagtttatt ggcatcaaag
      721 acagtggtct tatctgttgg atgtgaaagg tagagtgcat tgtaaacttc agttgatgta
      781 atagtacctg atgttggtaa aactttacca tctgctgttt gccaacgaac aaaggtgtga
      841 tttgccaata caccgtttac aacctttttc gtgaacaagc tattatcata accaatattc
      901 tgatagtata ctgccacaga ttttgattga ttagttgtcc cttttagtgt agccccctga
      961 ccagcatcaa aggtaacaaa caaccattta tcctgctcat ctgcaccgta ttgttttaaa
     1021 taagcatcaa tggtactatg aacatcttca acttcataga ctacatttgg ccacaattgt
     1081 gtatttctaa caacttggtc cttcattttg tcatatacaa acgcaacact tgcgctatag
     1141 ttggtatgag aaccccaacc aacaactatg tcacctgaat ttgtattgac agtaggccat
     1201 tgccaagcag ggtcacttag aagtgttgcc catgttacat catttttgac aaaaattctt
     1261 accgaattac cactttgatt tcctaatgtt aagcccttat cccacggtga cttattaaat
     1321 gtcacggtta catacccttc cggagcagtt tcgcttgtag aacttggaaa tttaataact
     1381 gctgtgtatg tagactcaat agtcgcttta ccatttttaa gagccccttc aacagccgaa
     1441 tctgttgttg catcatcaac tgcttttata gccttttcct tagctgtagt caactcagct
     1501 tgtttagtag ccttttcgtc aactgtaagt acagaatttt caatttctgc tttctcagca
     1561 ttgtaggctt tttccaagtc ttgcttagct tgcgccttct tagcacttga gcttgtgtcg
     1621 ataccagaaa ttgcggattg accgttggtt agtgctgtat ctacacctgc attatctgtt
     1681 gctgtgtcaa tagcattttc agcaacttct ttggctttat ccaattctgc tagcttggtt
     1741 gctttttctt ctaaagttaa gtttgagttt gtaatctcag tttccttagc agagtatgca
     1801 tcttcaagct gttgtctagc agcaatcttc ttatcactta ttatcgttcc aatcgcttcg
     1861 atatcagctt tacccttatt gagtgctgtg cctacacctg catcatctgt tgctgtgtca
     1921 attgcgctgt ctgctgcgga tttggcttgg tctagttctt cctgtttcgc tgatttttct
     1981 tctgcagtca aggatgagtt atcaatctca tctttcttag tattgtaggc ttcttcaaga
     2041 gcttccttag cttttgtttt tatagtacta gttgtgctaa ctgcttcaat cgctgctgtc
     2101 ccatccgaaa tagccttagt taagtcttca gtagtagcag cattatcaat tgcaatatca
     2161 gctcggtctt gtacatctcg aacttccgtc agtctagctc ttttctcttc ttcagtgaga
     2221 tttgaggcat tgatggcagc actcttttcc attgcatctt tttcaatttc tgctttggca
     2281 ttgcttctag cagtagcctt gtcttcgtta gtaagagttg cggatggaac tttaactgcg
     2341 gtaccatcat caaatgttac agtagcttca cctgtatcgg atatctcaat cgctttgatg
     2401 acttgcggaa cccctgtact taaatcaggg tttgcatcat atatcttttg cttgacctgt
     2461 tctttctcgg aagttgttaa atttgtacga tcaaatacag ctaccttttc ttctggatgt
     2521 tttaaccata ccgcagaaaa ttcagttgtt tcaatttgtc ctgaagtagg tataccttct
     2581 cctgtattgg tttgccaacg aacaaaagta taaccatctc tggatggatc aacgattttt
     2641 ttagttacta gcggatcacc ccattgtaca tgctgataag ccacataaaa agcttttttc
     2701 tctttgccgt caattgtgcc accattagca tccaatgtaa ttccgtggaa ttgaggaata
     2761 tggtatgagg catacgaccc cgagttcatg tattcttcaa atgtttttcc gtcgtcaact
     2821 tcgccaacaa tgtaatccac aacggtattg atctgccatg tgtctacaat aggagtgtca
     2881 ttgagagaat cgaaatcaat gtactgtact tttccgccaa cacttctagc ataacctaaa
     2941 ataaaatcgc cgtcgcctac tgtatattta ggcattctaa attgcgggtc cctctttaat
     3001 gctccccatg tagttccagt cttaacccaa aaaacaactt ttttagagtt tccattttta
     3061 atctcaccag gttttccttc aaaaaccaat gtcgaaagat aagtggaaaa ctctactttc
     3121 tggtaaccag caggttgtct ttggtcatct tgagtcggaa atttgataac cggttcatct
     3181 acaggttggt tagtcgaacc atctccttgt gttccagtat ctgctgaacg tgaggatcct
     3241 actggttggc tacttgctga acctgtatca cctgcaggct ggacattcgc agttgagttt
     3301 gttgtattac cagtctgaac tcctgagcta ttgactcctt gattatcccc ttgtggctgc
     3361 gtgccatcgg atatcccatc attacttaca ggtacaattt gctcgtttga aactccatcc
     3421 ccattgactc ctgtttcagc gcctacaatc gttcctgtac caagaaccaa ggtcgtacct
     3481 aacagaacac ttgcagcacc aatatgatat ttacggatag agaaacgctg gcgcgctcca
     3541 taccaatcaa atgatttctt tttcgaacga ttcatatcgt cactcctttt gaataaatat
     3601 taccagagaa aaaagaagcg ttcaaaaaat cagttttccc tagtttcaag tcaccaagac
     3661 tctgagttaa ttatacctca cccccccccg attttcaagt attttagtac attctttgta
     3721 ccgcacgttg taaagtcaag tgcaacaagt tcattgatga ctagagttcc agaatccaag
     3781 aagaaggtat ctatttcgac atcacgataa aagcaaaatt acatgaactc ctttatctgc
     3841 tttttaaaca tcgctatgta aacagacact attctgatga tgcctaccaa aagtgctaaa
     3901 agctcaagga attgttccga ttatcattca caaattaatt gcaactcact ttagagatta
     3961 gtatttttaa tactcattta aagtcaaaat tagctatcta ctaatcaaat tgtatataga
     4021 gaatttcaat tttgaagttt tcgaaatgag atggctagtc aaaatctatg atttccaatc
     4081 tgagcttaga tattgaaatt ttacacatag aaattgacct caatatgcta tttttgattt
     4141 ttattgagca ttagatatgt cctgtttcta attcactaga ctatccaatc cacggatttt
     4201 cataatattt tttcttttat cctttcaaac gttgatttca tgcggtttct agcaccttgt
     4261 atttagttga ttttgtaatt tgttcacctt tttgttcacc ctaaagacta ttcatggctt
     4321 tttcgtaata taaaaccgct tctttttcct tgtctttgga taggtgacca tatgtatcta
     4381 aagtcatagc gatattggaa tgaccgatcc tatattgtaa ttccttataa gtgataccag
     4441 cgttcaacag taaactagcg tgggtatggc ggaatgcgtg acaagtaaaa cgaggaatac
     4501 ccaaagcctt acaccgacaa tttataactt cttgtagtga aacccgtggg aggtattccc
     4561 ttaaagttgt cgcaaagaca acaccaggag cacacgcgcc aacctcaaga aacatcaagc
     4621 gttgacgatt ttgatattgt ttcagcaaga gaactgtttt tttgtctatg ctgataatac
     4681 gggtacccgc ctttgtcttt gttgtcccga taatgtgtag ttccatgcta taggttttac
     4741 tgattgatat tgtaccagct tctaggtcaa tatcagacaa ttcaagggca gacaattcac
     4801 caatacgaca accagtggca agtaataact taaaaataac atattggtaa tacttggtaa
     4861 agttcctact tgctaattgt tcagcataat cgagaaactg ttttaagtgt tcaggttcga
     4921 taaacctgac cgcctgacga cccgaagcac gcaagaagat agattactga acgctatcgc
     4981 agtaagtcag gaagtggatg aaatagagcg agctatctca aacttggata agttacacag
     5041 tgacatactt acagagaagt atatcaagcg tcagaaaaca ggtttggcac tctatgaaag
     5101 tttttacatg ggaaagtcta tgttttacga agcattacaa acagctttgt tagactttgc
     5161 ttgtatattt aagaatgggg aactattgca gtataaagac ggacagggct aatattcgca
     5221 aaataccccc aattttttaa tcgggggtgg gtttgttcgt gattccacaa cgccggccct
     5281 ttccgtgcac aattttccct ttttgaagtt tttaagataa aagaatttga caaatgcgca
     5341 taatgtgtat ataataaata atgtaaggag gtagagcgct atgccactta ctggaaaaga
     5401 aatggcaaaa cttgcagagg ctaacgggtg gaaagaaatc cgagtcaatg gaagtcacca
     5461 ccatttcaaa aaagaaggat tttcaaaaat agtcacaatc ccagttcatg gaaacaagga
     5521 cttgggcaaa gggctagaaa agaaaatcct gagagatttg gggctacttt gaaatgcccc
     5581 tcctttttcg cttttggagg tagaaacatg ttaaaatctt acccagctat ttttcataaa
     5641 gatgaacaag gttattgggt ggagttccca gagtttagtg gtggtactca aggggataac
     5701 cttgaggaag ctatgtacaa cgcccgtgag tttttagaaa gctctattgc cctttatatt
     5761 gatgagggga tggagttacc aaaagcaagc gatataaagg agttaagcgc tcctgatggc
     5821 tttgtttcaa tgatacaagc tgacccaaca ccgtatatta agaataataa agcaattaga
     5881 aagaatgtga cagtgcctga atggttaaca aaattagcag accgtgaggg tttgaactat
     5941 tcggaaattt taacaacggc tttagaaaca cgattacaag tgtaaacatg atataataca
     6001 cttaccagcg atcaaaaaaa gcgcatcaat tcgatacgct agttacttgc ctgctaaact
     6061 cataaaattt ttgaggttat cgccctttga taaccttttt ttcattgtaa aatttgttca
     6121 cctttttgtg caccctgagg gggaacataa ggaaatataa agagatacga ttttttaaaa
     6181 aaccagtaaa atcacgagtt tgggagttat aacactctca aacgttagtc aaatttcaat
     6241 tccacaacaa ctcatacttt caaagtcaga acacaaaaaa tgaccccgca aggtcatttt
     6301 tagtttctat ttcgcttcca aatgccagat atcttcgttg tactgttgaa tcgtacggtc
     6361 tgatgagaag aatcctgctt tggcaatgtt gacgataacc ttatccaacc agctgtcacg
     6421 gtcttcatag tcagccaaca ttctttcctt agtcacaatg tagtcttcca agtcaagcaa
     6481 agtcatgaag tggtcattgt gcttaaggtt atcctgtaag cgccagaggc gttcatcgat
     6541 accgccagcc tgacgaatgg tatcagaagt gatgaaatca atcaatggac ggatggcttc
     6601 acgttcgtat aaggcatatg gatggtaggt tccatttgca tagtggtcga taacagtctg
     6661 gctatcttga ccgaagatgt agatattttc atcgccgacc aattcatgaa tttccacgtt
     6721 ggcaccgtcg tctgtaccga tggtcagggc accattgagc atgaatttca tgttaccagt
     6781 accagaagct tctttagatg caagagaaat ctgctctgaa atgtctgccg ctgggatgat
     6841 gaagctggct tccgttacgt tgtagttttc aatcatgacc aactgcaaat gtggtgccac
     6901 ttctgggtca tttttgatca cctgtgacaa taccaaaatc agatgaatga tgtcttgtgc
     6961 tgtagtgtaa gctggtgccg cttttccacc aaagaagaca gtcaatggac gcgcggggat
     7021 attcccagcc ttgatgtcca aatacttatg gattacatag aggacattca tctgttggcg
     7081 cttgtattcg tgcatacgct tgatttgcac atcaaagatg gactctggat taacttcaac
     7141 accttgagtt ttagcaatat gacgttgtaa tttacgcttg ttgtgttgct tggttttttc
     7201 caaccaagat ttcagttcct tgtcattctt gtattctaaa agtttttcca actcgctagc
     7261 atcgtgatga tagccatgtc caagtaggcc atctaggtaa cttgccaaac ttgggttggc
     7321 atgcatgagc cagcgacgga aggtaatccc atttgtctta ttattgaatt tttcaggata
     7381 tagctcatag aaggctttca actcagatgt tttcaaaatc tcggtatgga gtgccgccac
     7441 cccattgata gaataaccat aatgaatatc catgtgggcc atgtgaacac ggccatgttc
     7501 atcgatgata ttgacagcag gatcatcctt cacttctttg gcacgacgat ccaattctac
     7561 gatgaacggt accaagtgag gcactacacg attcaagaag tcaagcggcc atttttcaag
     7621 agcctctgac aaaatagtgt ggttagtata ggctgtcatt ttcttaacaa tttcgattgc
     7681 ttcatcaaat gaaatgccac gaagttccaa caaacgaatc aattctggaa taacaagtga
     7741 tgggtgagta tcgttgattt gaacaacggc ataatcaggc aggtcatgta agtttgaccc
     7801 cttagcaact gcttcgtcaa tcaatagttg cgcagcgtta gacaccataa aatactgctg
     7861 gaagatgcgg agaacttttc cttcatcggt cgaatcatct ggatagagga agagagtcaa
     7921 gtttcggaaa atgtcttctt tgtcaaactc gataccatcg tagatgatat tgtcatcaac
     7981 tgaaccaagg tcaaacaagc gcaagcgatt cttccgctct gtcttataac caggcacatc
     8041 gatatcgtac aacttagaag tcaaggtaaa gttagcaaat ggcacttggt aagaaatcgg
     8101 tgactctgtt aaccatgaac gtggtgtaat ccactcgttt ggcgcagctg actgctgatg
     8161 atattcaaac aactggcgga aaagaccaaa gtgataattc aagccgaccc catcaccgtt
     8221 aagacctaga ctagcaattg aatcaaggaa gcaggcagcc aagcgcccca aacctccatt
     8281 accaagagac ggttcaagct ccatgtcttc aatagcaatc aaatccttac cagccgccac
     8341 caactggctt ttaacctcat cataaagacc aaggttaatt aaattattag acaagagctt
     8401 accaattaag aactctgctg aaatatagta gacctttttc ttttggtcat ttgtatactt
     8461 agcttcactc tgctgttttg taaaagcaag caaggcgtag tagagctctt ggtctgtaca
     8521 atcttcaatg cgtttggcat acatagattg aacaaaattt tgtaaattaa tcactgcata
     8581 tctccttttg tatatgttaa tgtaatcatt cagaaaggtt ttgtttcgcc tttgtaaacg
     8641 ttttcttaat tataccctat ttataaaaaa aagacaagcc aacttccgta caaatcgaaa
     8701 ttggttcgtc ttttatagat tgcaggttac tacaatcaga attattctta attattctgc
     8761 aatcagagtt tccaaaccaa ctttcatcat atccgtgaaa gtattttgac gctcttctgc
     8821 tgtggtgtct tcctctggat taaccaagct atctgaaatc gtcataatgg caagcgtttg
     8881 aacgccaaac ttagcaccta ggtaataaag tgcagctgct tccatttcga ctgccttgac
     8941 acctagttga cctaattcta agttgcggct aaacaatttt ggagaataga aactatctga
     9001 tgataaaaca ttgccaacat gcgttgtcag attgagttct ttggcgatat gataagcctt
     9061 atctaaaaga ccaaaatcag cgatttgtgg caaatcgtac tctggccagt caatattgat
     9121 catgcgagaa ttagttgctg cagcctgagc caaaaccaat tcacgaacat gaacatcctt
     9181 gttgagcgaa ccggcagttc ctacacggat tagctttttc acgccatagt cattgatgag
     9241 ttcatgagca taaatcgaga tagaaggcat ccccatacct gttcccatga cagagacacg
     9301 atgacccttg taggtacctg tgtagccgaa catattgcga acttcgttga agcaaacagc
     9361 atcttcaagg aagttttcag cgataaattt agcacgaagc ggatcaccag gaagcaaaat
     9421 cttatcagcg atttcgcctg gttttgcgga aatatggata gacatgtaat gtacctcttt
     9481 gttctatttt tgaatgctta caactcagcc aagatagcct tcaccaagcc cttgaagttg
     9541 cccttgattt gctcggttac ttctacaact tcttcgtgat tgagttcaga ttggaaacca
     9601 gccgcaaagt ttgtgatagc agaaataccc aagactttca tacctgagtg agctgccacg
     9661 ataacttctg gtacggttga cataccgact gcgtgggcac ccatagtctt gaaggccaag
     9721 atttcagcag gtgtttcata ggtaggacct gtcacaccga gatagacacc atcgtccaac
     9781 ttgataccca atttttccgc aatggcatgg gctttttcac ggtattcttt tgtataggca
     9841 tttgacatgt ctgggaaacg tggaccaaat tcttccaagt tttcaccaat caatggattt
     9901 tggccagtca tgttgatgtg gtctgtaatg gccataaggg tacctggacc gtagccgata
     9961 ccacctgcgg cattagtaac aatcacgcct tcacaaccaa gagctttcat gacacggact
    10021 gggaaagtca caacttccat cggatttcct tcgtagaagt ggaatcgacc ttgaagagcc
    10081 aagaccttac gtcctgccaa atcaccgtac accaacttac cagcatgacc tacaactgtt
    10141 gacttgcccc agtttggaat atctgcatag tcgatgacaa tggcattttc aacctcttga
    10201 gccaattcgc ccaagccaga acccaaaatc aaaccaaatt caggttttac caaacctttt
    10261 tcttccaaga acgtttttgt ttcattgatt tttgcaagta aactcatatt ttctcctttt
    10321 ataaataatc cgaccagtca tattctggca ttttttcttt aatgatttca agcggacgac
    10381 agaggaaggc tgtctgctct cgctcgataa tggggcgatt gagagtagca ggctctttaa
    10441 ctaaacactc aaagatttct tcttctgaca aggctagtcg ttcttcttcc ttcaatcgag
    10501 taactgctga aggttgactt cccatttttt ccaaaagagc tgtcaattct gctcccctta
    10561 atggcgtttc caaataatta acccacttga cttccatacc ctgactggac agcaatattc
    10621 ttaatttttt acacttgcta cagtcgggat tgatatagac cgttagcttc tccattaaac
    10681 tagtttctcc aagaagcttt cgccaatcat tgctgtgtca actccgaagt tttccgcaac
    10741 ggttgctgaa atgtccgcaa aatggcctac tggcaagaca ccgctacctt tgaaagcctt
    10801 gctgtatgct aagagtggca catattcgcg tgtgtgatct gttccagcat aggatggatc
    10861 attgccgtgg tctgcagtaa tcaagagcag gtcatcttca cgcatattgt caataatctc
    10921 tggaatacgt gcatcaaact cttgcaaaca atcgcggtag ccttcgatat tgcgacggtg
    10981 accatacaca gcatcaaagt caactaagtt tgtgaaggag aaaccttctt cgaagtctga
    11041 taacttcaga gtatcaatca acacatcgac accgtgcatg ttggacttgg tgtgacccat
    11101 atcatttgta atacctgaac cattgaaaat atcactgatt ttaccaactg agtaggttgg
    11161 tacacccgca tctgccagtt tgttgagtac tgtttcttca aacggtgata ctgcatagtc
    11221 atgacgattt gcagtccgtg agaaattgcc tggctcacca acgtatggac gggcgatgat
    11281 acgaccaaga agagctggac gttcaagggt aatggaacga gcgtattcac agatacgata
    11341 caactcatca agtggaataa tatcttcgtg ggctgcaatc tgaagcacag ggtctgcgga
    11401 ggtatagacg attaactccc cagtttccat ttggcgaggg ccgaagtcat caatgacagc
    11461 tgtacctgaa tacggcttgt ttgcttcgcg gatgatttta cgacctgaga attcttcgat
    11521 ttttgtcaaa atctcttcag ggaaaccatc ccagaatgta tcaaatggct cagtaatatt
    11581 gagacccata atttcccagt gtccagtcat ggtatcctta ccaagcgata cttcttccaa
    11641 cttggtcacg taaccagtcg gattttcctc agtaggaact gtcgcaaggg ctgtgtcacg
    11701 agggatattt ccaagaccga ttttagccat gtttggcaca gctagacctg ctttttcaga
    11761 aatgtggccg agagtgtcag attctgtatc tgctacaccc gcattgaaaa atttatctga
    11821 gtctggtgct gcgccgattc cgacagagtc cataactacc aagtgaacac gtttaaattt
    11881 aggcataatt gtctccttta tttgaatagt tagattcaac caaaatcaac gtccaaccaa
    11941 gttgccagac tggaaattat cgttaccaca tctaaacatt ttaatggggt gcaatactta
    12001 tacagtcaaa gctctcggca tcaaacttcc taactatcaa cactagatac tgttactcgc
    12061 ttcactgcct gctgttcagc tatcgcggtt tcagtaccta tcatctgact gctacgaggt
    12121 aaggggatag atttttgaag agtctaaacg ttcgtgtttt cattatacca taaaaaagct
    12181 tctcattgta ccaaaatgag aagcggtttc aatttatttc ttttcgatga tgttcggtcc
    12241 ttcttgtgta ccaacaatta ccttggaaat caatccaata aagagaccgt gttctacaac
    12301 accgacggtc cgatccaatt cttccgccaa tgcatatgtg tcttctattc tgcgcaaatc
    12361 aaggtcaatg ataaagttct gcatatccgt gatatgtttt tctccattac gcatacgaaa
    12421 acttggacga tacccttttt tctcaaatag tcggaaaaga ttttccgcac cgtactgcac
    12481 gacttccacc ggcaacttga aggctcctag ggtttgaacc atcttagact catccacaat
    12541 ccagatgcag tccttgctat tgactgccac cactttctcc atgagaagcg ctgcgccacc
    12601 gcctttaatc ccattgaagt ctccatcaac ctcatctgct ccatccaccg ttaagtccac
    12661 atattcgact tcgtcgatat tttttagggg aatcccaagg gacgcagcat gttctgccgt
    12721 agcatgagag gtcgttacgc ctgtgatctg tagcccttct tctgcaaccc ggcggccaat
    12781 ctcctgcacg aaatagtagg cagtcgaacc agttcccagc ccaacaatca tcccgtcggt
    12841 cacaaactcc gccgccttaa tcccaacctg ctctttaaga tttgtcatct ttgtctcctt
    12901 tgaagtcatt catgaaacaa ttataccacg aactggttta agaggatagc gaatacataa
    12961 aattaactac ttcaattttt ccagaaaagc agttaattct gcctgtgctt ctggtgtggt
    13021 gccgactagc tgaccaagca tgctttgaag ttgggccgtg gttgctgcga tttcctcatc
    13081 ggtctgggcc agcttgtccg caagctctgt tagtggaaca actggctctt cctcaaaggt
    13141 atcgacatag cgagggatgt tgaggttgta gtcgttttcc acaatctcct caaagctagc
    13201 taggtgggca aacttgtcca catcctgacg gtcttgatag actttcaaaa tcttggcgat
    13261 atggtcatcg gtcatgatat tttggttttt gcccttgtca aattctttag aagcatcgat
    13321 aaagaggaca tctttactgg ttcggttttt cttgagaatg atgactgtgg ttggaatgga
    13381 ggtattataa aagatgttgg ctggtagacc aatcacggtg tcaatggctc cttcttctag
    13441 aagatgctga cggattttct gctctgcatt tcccctaaag agaaccccgt gaggaaggac
    13501 aatagccata acacctgaat gcttgaggtg gtagaaacca tgaagaagga aggcgaagtc
    13561 agccttggac ttgggtgcaa ggacaccata gctggagaaa cgtgcgtctt gcaggaagcc
    13621 agcatcccca ctccacttct gagaataagg tgggttcatg agtaccccgt caaagtctgt
    13681 cggctcagtc gttggccagt ccgcatcaag ggtatccccg acatgaagtt tttggttttc
    13741 aatggcaacc ccgtggagca tcatgttcat gcgggcaagg ttgtaggtcg aggtgttaat
    13801 ctcctgaccg aagtaggaaa ctgtcgaagc ctctttactg taacgtttgg cgttaagaag
    13861 gagggagcct gatcccatgg ttgggtcata gagggtcata cccttttgat gttcccgtcc
    13921 aagaaagaca atctgggtca tgaggtggga aacagcttga ggcgtataga actcgcctgc
    13981 tttcttacca gagtcgctgg caaactgacc aattaggtat tcataggcat ctcccaagac
    14041 atctccatca tggttactga ggttgagttc atgaagttct ttgataaggg ctgaaatgac
    14101 ctgattctgc ttttgtggtg ttggtcctag ctttttagag tagagatcga tgtcttcaaa
    14161 aaggttttca aaaatctcat tggactgctc aatatcacgg aaaccctgtg ccaaatcttc
    14221 caactggaag ttgctggtgt ggacttttgc taccaaggct gtaaaagtca gaccaggctc
    14281 gataaagtaa cctagctcat catcaaggac atctagcaaa tcttccttaa catctggatc
    14341 cgcaaaattt tcttcataaa gtctttgagc ctgtgacaaa ctatcaaagg attcatcaag
    14401 gttgtcacac actgccaaaa gtaacttatc tgacaggtat ttgtagaaaa tcaagcccaa
    14461 aaggtaggac ttgtattcgt tagcgtccat cttgccacgg agaatatctg ccgcattcca
    14521 aagggactgg taaagggatt gtgagttgtt tgaattgttc atgtctgtga ttctttctaa
    14581 agatatggta taatagataa gtagagaaat atgacggtgg ttccaacttt ctaactggag
    14641 gtggtgctta tggaaataag tccgaaatct tacagaaagg ctagcctata cttgatggta
    14701 agtaaactta ctcatcaagt aacgacaaat cctattcgat ttgtctaagg ctcgcactag
    14761 ctcgattttt gaaaaatatc gtttcaaaaa tctcacgtcg gaggtacctg ctcaaattag
    14821 cattagttga accagtctaa tctaataatt ctttatatca aataaaaaaa caaaaaataa
    14881 aaccgtcaat attttgggac actgacgatt ttattttaat ataaaacaaa cattgtgaac
    14941 caccgaaatg gctctactag gagttggatt gccgtccaac tctttttcta tgcttatttt
    15001 aacaaaatat cgtcagttaa tcaagatttt tatattggat aacttaggag catttgaggc
    15061 ttagcagagc tatacaaata atttacggag cagagtcttt ttcatctctt tcaagctggc
    15121 tagcttgtcc tccacctgag caagctcttg gtcaagggtt tggaagaatg aggaaagaac
    15181 ttcttgttcg gcaaaaccac caggaattaa taatattatt tcagacatga tattattcat
    15241 taatttggga ttacctactt tggaaacata tttccatgca acagtatcca aaatttctga
    15301 tattgctaga ttactgtatc cctcagccga taacaaaaca ccattaacat ttgtactata
    15361 aaatttacct tctctaaacc taactgtacc agcatttgcg ccatcggttg tccatgtaat
    15421 tgcggtgtca aacagataat ctttgtaaaa acccatcaat ccattattct tagtttggga
    15481 ggaataaact ggatatggat attcatcaga ttttgtatcg ctaactaaat tagtagataa
    15541 aacctgacct ctagtgactt gaaaaatatc tgcaactttc acttctttcc agtcgtcttc
    15601 aaaaccttgg aagcggaggg ctggtttagt ttgtcccttg gctggaaaga ggagtttgag
    15661 ataggtcttc ttctgctgct tgagcgtatc caacttacgc tgatgaaggg tgatttgacg
    15721 gtctagggtg gagaagaagg tgccgatggc tttttgttcg ttaattgatg gcaacataaa
    15781 ctcaagttgt cctaaagctc gactagatat ttccgcaaaa gttgaacccg aagccacact
    15841 aattgcttta ttttttattt tgtcggtcat cgaaaaaata aagtaaggtt ctgtattatt
    15901 atctacgact attgattgaa aaccttgatt agttgtagca tctgaatgta aaattgcagt
    15961 ttttccaatt cccgctctac ttgtaaataa aattgtttta ttagcaggaa gaagtgtagc
    16021 cgaactttta tctagtccaa gttgggtgat ttttctttca cttccatcaa catagatttg
    16081 ttcacctatt tcagctggcg tataccaatc aatatcacca tcccaaaatt ccgaattgct
    16141 agtacttgga gttccacctc ctataatctc cgccacctcc cccaacttcc gcagttccca
    16201 agcgtcagtg tagccttgga aacgataggc tgggatatta ttgcttgttt tcattaaatc
    16261 tcctttacac tactgtatct gtatctgtat caataaacct caattgatgg gcttttttag
    16321 caccccaaga ttgtaaagtt cgtttgatat tacgttcctt ttcttcgcta tatttgtagt
    16381 tatcgatgaa aatgtccacc tgaggtactc gtttaaatat ttcctcaaag tatggtctat
    16441 ctactgtatt gctatcctca agattaaaac caatcacata gatttcttta atatctttca
    16501 gtttgtcaaa aaacatttga tgattgttta actgctcaat aactggtttt tttaatacat
    16561 tttctaatct attcatcgaa tgagtcaaat ccctataaaa ttctggttca tcatcaggta
    16621 acacactttg accatgacca taaataaata ggttatcaac tatactgcca tgaatatgac
    16681 aaattctttc ctccaatatt tgatacactt cctctaatac catcgtgtaa ttaaaggtta
    16741 agaatagact ttctctatta ttaataactg tttttttaat aggctgaagt ccaaggtatt
    16801 gctctgtatc aggtaatgat tgaacccagt ttggaaataa gtcgtccttt agagggagta
    16861 ttgcttctag tagcgagttg ttcagagctt ctaaataata ctgattttga aaataatcaa
    16921 agtcaccatc tttatcataa aaagtattaa catcaatctc taagtcaact atctctccaa
    16981 gtgaggattc aaatttatgc caatcacctt cagttaattg agataccaat cggaaaaaga
    17041 acttaaaaat atcatctttc agaaaatctt ccccaccatc aggcatagtc attgactgcg
    17101 gtaataaaaa atcactaata aaagggacac ctgtttcaaa ctcatttctt tcagtttctg
    17161 ttaaatctaa ttgatctaaa atccatcttt tgaaatcata gaaactggtt ggcaatttgt
    17221 gtgccaaatc aaacccattt ccaataatga atagtttatc catctttcta cctccccctc
    17281 agtggcagga tttcttccgc aatcatgttc atatagtcct ctttgagggc tttcttgtat
    17341 ttgagcttgt tgagggcttg gtcgcccttg ttttccttgt agcttgtata gtcgtaggta
    17401 tcaacaaggg ctttttcacc gatttgcttg tccttgccga ctcggtagtt gtccacgata
    17461 aactggagtt catcttcacc gacacaccaa tctcgtgcgg tggatacgac ttgttcacgg
    17521 atggttaggt caatcatctc gtcaagcttg tgggcgatgg attggccctt gtaatcttgg
    17581 gtattggttt gggcttcctg ccagattttg gagatgagtt gggagagttt gggattggtc
    17641 ttgtctaagt cagcgatgta gttgtccacc atcttcttct ccttatcagg aatgacttga
    17701 tttttactgt caatcaagtt ttggatgaga gagatgatat agtggtaatt gatttcatcc
    17761 gtacggacag attccagctc gtattcaata tcaaaaggcg tatcttctat gccttcgtca
    17821 tccttccgcc gtctgcggag ttcttcaatg acattttggt attgtccaga aaaattctca
    17881 atatcctcca gactaagccc gatttccttg agaaggtcct cttgctcgta gtcggcatag
    17941 acctgtacgg aggcaaatag cttgtcaaat tcctgaaagg ccttggcaaa gcgtttcaac
    18001 tcggcatcac tgctggcatc taggtctggc accatttcag gatttggggc aatagccagc
    18061 aactgctgaa ctttttcctt gaacttggct ttttcttcca accaagtcgg agccagcacc
    18121 gcaaactcgc caccatttga gtagagactg agggcttcgt caaccttttc cttgaaacgt
    18181 tctggggtct ggaaggtgac gatttgtcca aacttcttgc cctcgtcaaa gagacgattg
    18241 gtccgtgaaa aggcttggat gatgtgctgg ggtttcatag gctgtcggtc catgaaaatg
    18301 gtagacaagc acggagcatc aaatcccgtc aagaggcgat ccactacaat aaccaagtcc
    18361 aactgctcct cacggaaggc atacttgtct tttttccgag ccaagcgttc gttgaggtca
    18421 gtattatagg aaccaagggt cgccatagtg aaatgcgtac caaacatggc attgtaatcc
    18481 tccaagctct tgctcatgta gtcttgatta gcaaaggaag attcgtcgtt ctcagtcact
    18541 gagtatgtga tggcaacttt tggaaaatca ggcaagactt ttttgactga ttccgaaatt
    18601 gttaggctct tctgtcctgc cttgacttct tgtatcagat catagtaggc ttgggcacgg
    18661 gcgatggact tgacagtcag taggccctcg taggttttcc ctacaccgtt ttggaaaccg
    18721 agtttgcgtt tggatttgtt taaaatagca tccaacaccg tcaacatgtg ccgttcatcg
    18781 tcgtaaaact cgtcttcgat ttcatcctca gcccagccag gcatggtagt ctggtattcc
    18841 acttggaaac caagaacagc tcggtcatgg atggcttctt tgactgtgta ttcatggaga
    18901 catggcccat actgttcttc tgtcgtctgg gctaaatcac ctttttgctc ccgcttgttc
    18961 tctttgaaaa taggagtacc tgtaaagcca taccaaagcg agttgacaaa aaattgttcc
    19021 aaaatccgct ggcgttctgg ggtgacagcc cggtggcatt cgtccacaac aaaggctaga
    19081 ttgagattct taacacgttg gtggaatttc tcatgaagcc cctcttcaaa ttgacgcaga
    19141 agggtattga gtttttgaat agtggtgacg acgacacggc ggtcttctga agacagattt
    19201 ttcaacaggt gctgagtgtc atccgtctgg tcaatatcta tcatgtcatt ttccgcatag
    19261 gacagaaatg cagaggtagt ctgctggtca agatccgtac ggtcaatgac aaaaatggtc
    19321 ttctcaatgg atgggatttg caggagattg cgtgccacct tgtaggaagt cagggtctta
    19381 cctgaaccag tcgtgtgcca gatatagcct gactgacgaa gacgactggc ttctcggatg
    19441 gcttctatgg catggatttg atagggacga agcaggataa gggctttttt gtcgtcgtcg
    19501 ataacgctat attgcatgac caactgatga gccataggga tggaaaggac ctctctggca
    19561 aagtcaaaga gatggggctg ggcttgattg tgcttatcca cccacttggt caagaagcgg
    19621 tcgttgagtt tagtttcctt agcagcagcg atgtagcggg tttccgtgat gttagacact
    19681 acaaacattt gtagactcga aaagataccc ttaaactgac cttcttgctc gtatttgcga
    19741 atttgacgga aggcatccat atagggatgg gaacggctct tgagctcaat ctgaatcatg
    19801 ggtaggccgt taatcaagag ggtcacatca ccccgtcttt gtctggcagc atcgccacct
    19861 gtcacaactt ggttgacgac ttcatagctg gacttgcccc ctgcgacgtt gtgtcgccag
    19921 atgacttcta gtcggatggt gcccagacta gcatcttctc gttggacttg caccttggca
    19981 atgccattct cacctgccag ccacttggct gcttcgtaga aattgacaaa gttgagctgg
    20041 ttcttgattt ggtgtttttc ttgatctgtc agaggatggt ctgctaaatg gcggacatta
    20101 ttggcttcta gcttagcgaa aaagttggcc cagagcagtt cttccgttgt caattcagga
    20161 cggtagaccc actgactctc tccgctgatc aaatgacgaa tgagttcatc ttctatctgt
    20221 agctcatttg caggcttttt ggtctgataa agagcctgag ggtcaaccag ctcccgttgg
    20281 ccaggtagta aacgcagact gacttgaaaa tcttttaagt cctcttcatt cactttctgt
    20341 agcaagttca gaagatgttt gcggaaaccg attaactgac cgtgggcatc tgctaatttc
    20401 tgctcggctt gggcatagtg gtcaggctta cgcttgatgt ccagatagcc tttgacaata
    20461 tcggtcaagc gggcttgttc cacttggtaa acagcctcca actctaaggc attgtcctgt
    20521 ctttctagtt tttcaagcaa gcctgcttgg tattcctcta tggctctcat ttcttccaag
    20581 agttctggtg catagactgg tatgtctagc ataagttgtt tccaagtcat ctagacacca
    20641 gcctttcgac aacgcaaaaa gcctgccaag actggcaggt tttgtttact atagaattga
    20701 gcaagtgttt tagaatgctt tgatatatat atatatatat gcaaatctat ttagaaattt
    20761 catatctctc tccaaaaaaa tacaaagatt atgtatgttt attttatcat attttaagct
    20821 agaatggaat agaaaaacaa ttgatttagt gagcatgcat tcccatccct catctgtgca
    20881 tttttcatca ttccatgata cactaataga taagacgatt ttagaaagaa agatatatga
    20941 taactaagga atttgacaca attaccgcta tatccacccc tctcggtgag ggggccattg
    21001 ggattgtccg cctttctggg acggacgctt ttgccattgc cagcaaggtt ttcaagggca
    21061 aggacttggc gactgtaccc agtcacagcc tcaactacgg ccacattatt gaccctgcga
    21121 cagggcaagt gctggacgaa gtcatgattg gagccatgcg ttctccaaag accttcacac
    21181 gcgaagatgt cattgagatt aacacccacg gggggattgc cgttaccaac gaaatcctcc
    21241 agctcctgat tcgccaaggt gctcggatgg ccgagccggg cgagtttacc aagcgagcct
    21301 ttctcaacgg ccgtgtggat ttgacccaag ccgaggccgt catggatgtt attcgtgcca
    21361 agaccgacaa ggccatgcac aatgccgtcc gccagcttga cggctccctc tcccagctca
    21421 tcaacgacac ccgccaggaa atcctcaata cgctggcaca ggtcgaggtc aacatcgact
    21481 accccgagta tgacgacgtc gaggaggcga cgacagagct ggtccgcgag aaaactctcc
    21541 agttccaagc tcttttggaa aatctcctcc gtactgcccg ccgtggaaaa atcctgcgtg
    21601 aaggcatcgc aaccgctatt atcggtcgtc caaatgtggg aaaatccagc ctgctcaata
    21661 acctcctccg cgaggaaaaa gccatcgtta cagacatcgc aggaacaacc cgcgacgtta
    21721 tcgaagaata cgtcaacatc aaaggcgtcc ccctcaagct gattgataca gcaggtatcc
    21781 gtgaaacaga cgacatcgtt gaaaaaatcg gtgtggaacg atctaaaaaa gcccttgagg
    21841 aggccgacct catcctacta gtcctcaacg catccgagcc actgaccgag caagatcgta
    21901 acctcctagc tatttctgat atggcaaacc gtatcgtcct gctcaacaag accgacctcg
    21961 aagagcagat cgaggctgac caactacctg aggatgtcat tcgcatttcc gtcttgaaaa
    22021 accagaatat caaccaaatc gaagaaaaaa tcaaccagct cttctttgaa aatgctggtc
    22081 tggtagagca agatgccacc tacctctcca attctcgtca tatttccctc attgagcaag
    22141 cggtccaaag cctgcaagct gtcaatgacg gtcttgaaat gggcatgcct gttgacttgt
    22201 tacaggttga cctgacccgc tgttggcaga ttttgggaga aatcacagga gatgcagctc
    22261 cagatgaact catcacccag ctctttagcc aattctgcct tggaaaatag tatcacatat
    22321 catgcaagaa aacttgcatg atttttatta tattaacaca aaaatatttg attatcttta
    22381 ccatttagga tatactaaac tatagagagg aggtctttcc atgaaaaaaa tcatcatctg
    22441 tattgcactt ctatcctgtc ttgtttttcc ctttatcggc tggaaactct acgcctacca
    22501 gcacaacaaa ataagtttga ctgagaatgc ggacttctac ttggtttatc ccggtaaggt
    22561 cgaagccttt cagctaaatg gtcaagaacc tgttctactt catacccaaa aaatgaattc
    22621 agaggggtat tttggttctg gtaaaaatta catcctcgaa gatcgctatc tggtctttgg
    22681 caatgaccat cagaaattta tccatgataa tctcatttcc attgactttc aggatgggac
    22741 tgttttgcgt aagcctagca aacatagtac ctcgatcagt ggcacagatg gaaaccattt
    22801 ctatacagca ggtgcttatc atacgcttgc gcaatttgat aagcaatttg aaacacgtca
    22861 aacccacgtt ttaaacgatg acttcatccc aaatgatcca gtcatggtag accaaacgtc
    22921 agtctattta actggttttg tgaaagattt tacccaagaa gggcccgagg aaaatgtctt
    22981 gattgtattt gataagaaag atttttcgaa acaagaaata ttcaagtacg acaatagcat
    23041 tgcaacaggc gatggactgt tggtcaatgg aaccatctat ctcactattt ttggcaagag
    23101 agctccagaa tacgaagatg ggcaagttcc taatgaactc ctgacctttg atacaaaatc
    23161 caaatcattt tcgtccgtaa ctttagagcc cccctcacca agcaccctcc atgctctcaa
    23221 agaccagaat cttctcctca tcgagcatca aaatggcatg tttagcccac tttcctttac
    23281 tatttacaat acccaaactg gcgagcaatc ctaccatact ttgaaggact taaatcctcg
    23341 tcctcactac atcgaccata tccgtcaaat cgatgacaag cgcttaatga ttattttggc
    23401 aaatcaactc ctaatctatg atatggagac taagagtatt atcagccaga ccactctgtc
    23461 agaagactac gtttctggaa tttggatcaa tccataaaat aagaactcgg ctcagggaac
    23521 cgagttcttt attcgttatc ttgtaaatcc acacttggaa cggttgtcgc cgcatcagta
    23581 ctagcttgga acaggtcgac tttttcatag ccaaataggt tggcgtagag ggaagtcggg
    23641 aaccgtttga tttttttatt ataggcagtt gctaccgcat tataatcctt gcgggcaacc
    23701 aaaatccgat tttcagtccc ctctagctcg gtaatgaggt cagatacctg ttggttggct
    23761 gtcaattgag gataattctc agctactacc aacaatctag atactgcaga atctaactga
    23821 ctctgtgctt gattgtagtc actggtccct acttggctgg aaccgatttt cgcacgtgca
    23881 tccgcaatgg ctgtgaaaat ctcttcctca tgctccatag ctcctttaac tgctgccaca
    23941 acattcggaa tcaggtcata gcgccgttgg agctgggtat ccacattggc ttgggcattt
    24001 tccacttccg catggctatc gaccagtcca ttgtattggc cgatggcacc cattcctaaa
    24061 aatagcagag cgaaaaccgg gattagtata gctaaccatt tctttttcat agactttcct
    24121 ttcttttctt accaaccaga tgaggctcca ccgcctccac caccgccgcc agaccaacca
    24181 cctccaccat aggatgatga agaatgggag gaatggttat tgtggtaatg atggcgatca
    24241 tccaccagca tccagagcag attgcctgga cctccgccac cacggctgga tttatcaatg
    24301 atcataaaga taatgacaac gagaataaca atcataaacc agacaaaact atcactttcc
    24361 gcactggtcc tttcttccat ggctgctagt tgctcttgac ccagactagt cccgtagaag
    24421 cgatctccga tagattggac aatgtaggtc actcctccgt catagtcttc ctgacggaaa
    24481 aattctctag cattatctag aatgtcctta gcttccacat ccgtcaacac cgtggcagca
    24541 ttgtcagagg tttctatccg aaactccctg tcggctatgg caatcaccaa gagaatgcca
    24601 ttgtctgtcc cagcaaagcc aacttgccag tcacggaagg ttgcgttggc cagactttca
    24661 atatcagtag aaagactttc cgtcacatag accccaacct gcagttgttg ctcgctagct
    24721 gcccaggtct gattgagctg gtcaatattg gcgatggttt cactagaaag aagctgggtt
    24781 tcatcaacca ccgtcgtatc aatcggacgg gctggaattc cctcagctcg tgccaggccc
    24841 ggctgaccta ggctgaacaa taaaagcaaa aaacccaata aataacacaa atactttttc
    24901 ataaagcacc tcctgaagga agaaaacgtt atcttttata ttattgtatc atttttacct
    24961 tatttttcaa gtatttgcat aagtattttt tgtaaatttg gaatgatttc cgcttgaaac
    25021 caaggattct ttgcctgcca gatattgttt ctaggtgatg gatggggcaa aggaaaatag
    25081 gtgggaaggt aatcatctgc atgtttcact ctcttcgtca ggttcctttg ggatttttcc
    25141 aaataataag tttgagcata attgcctacc aatatggtca gttcaagctc tggcagttgg
    25201 tccagaataa gcgggtgcca tttgggagcg aaatccttgc gaggcggcaa atccccagac
    25261 ttcccttttc ctggataata gaaatccata ggaagaatag caaaatgacc cgattcataa
    25321 aaagtctgtc gatccacgtc caaccatcga cggaggttgt caccactagc atcgtcaaat
    25381 aaacgccctt tttcctgggt cttcaagcca ggtgcctgtc caataataag aatttttgcg
    25441 gttgaaggtg cttggaaaag gggagctatt cccttgttcg taaagtctcg gttagcaaca
    25501 tcctcaatga tggcttgacg aatatcagca agttccatga tgtcctactt tcttaaccat
    25561 ggtcacatct tcttctaagg ctcggaaacc gcattttttg tagaaagaat aggctgaaag
    25621 gttgcgttcg gtttgcagaa agatatgaac aatctgtctt ctctccaact gctcctcaat
    25681 tctttttagg aaatcttgtc cgattcctct gccttggcag tgacgagaga tacatagctc
    25741 ttcaattcga tactctgttc cctcatacca attgcggatg tagccaagtg atagacctat
    25801 caatttttcc tggtcaaaca agccaaaaca gagtgctctt gagtgtccca gtaaatcgcc
    25861 tatgtagcaa tctaattgtt cctcatccga ccaatcgtca ttccaaagtt cctggctgaa
    25921 aacagataaa aataattctt taaccatttc catgtctgaa aaacaaagtt ctttcagctc
    25981 catacttcct cctaaaaagg gagtgggaaa gaactcgact agt
//
LOCUS       DASFQS010000019        25727 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.019, whole genome shotgun sequence.
ACCESSION   DASFQS010000019 DASFQS010000000
VERSION     DASFQS010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 25727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25727
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.019"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..435
                     /locus_tag="U1041_000722"
     CDS             <1..435
                     /locus_tag="U1041_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEM4767847.1"
                     /translation="GLIIGVSGNTVQTIEQNLVGNLSVGGPAQYASQQISNLVGWFYP
                     PYSDSTAVTTQASSGNLGKVKDEQGTMTVKVSLLNVRDKPGVDGKVVATYTNGEQFNY
                     DSVYIADGYIWVSYVSHSGVRRYVAAGEESNRRNVVPYGTFK"
     gene            1724..2239
                     /locus_tag="U1041_000723"
     CDS             1724..2239
                     /locus_tag="U1041_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000837197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767848.1"
                     /translation="MKSKRLKLGQIDLQMCKDFDIIQAMDYDFQSKKILNKGRGFAIV
                     LVQIQELTFLIPLRSYMPKRYQLKYKLRPSNRVGYVEGLDLGKSLILEDKKYLLNTNF
                     RLREVTDYYKLMDNDKMIINKLIKVIVDFNKAVSDKDIHKLTDPKRFKFSTFVNYKER
                     LKTISEKDYLK"
     gene            complement(2675..3892)
                     /locus_tag="U1041_000724"
     CDS             complement(2675..3892)
                     /locus_tag="U1041_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEM4767849.1"
                     /translation="MSNKMKQAIQLLFFSSLIGVGAGIITTLFGKILLGVGELRSEYF
                     TYLIPFLPLAGVLIVFIYQKWGREVQAGMGLVFKAGQGEKAQISPVLIPLIISTTWLS
                     HLVGASVGREGVAVQLGASLSHWLQKHGFTHLPKDMITKIGMAAGFAGLFQTPWAASF
                     FAIEVLIVGQYSWTSLPYCLVAAFTASTTSHLLGLEKFSHTIATTSFQFTDSFKWLFI
                     ALCFGFIGNLFAWFLAQAKSISTRWLPNPYIKIAIMGVGLIVLLFFFHQGRYAGLGTN
                     LIDASLAGEQVFAFDWLLKLLLTCLCLAAGFQGGEVTPLFAIGASAGAVLAGLLGLPT
                     ELVAALGYCAVFGTATNTLLAPLFISYEVFGANILPYAIPVLAIAYLINRKQTIYYGV
                     QVRKFNNAKKPII"
     gene            complement(3882..4160)
                     /locus_tag="U1041_000725"
     CDS             complement(3882..4160)
                     /locus_tag="U1041_000725"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEM4767850.1"
                     /translation="MNLDCIREQINTIDSQLVELLEKRMELVDQVTAYKRATGKPVLD
                     TSRENAVLERVGKLVQKDDYRSAIQATFSDIMAQSRTYQSSKLANHEQ"
     gene            complement(4242..4511)
                     /gene="rpsN"
                     /locus_tag="U1041_000726"
     CDS             complement(4242..4511)
                     /gene="rpsN"
                     /locus_tag="U1041_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012560987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEM4767851.1"
                     /translation="MAKKSKMARYQRQLELIERYADLRKSLKEKGDYQALRKLPRDSN
                     PNRLKYRDRTDGRPHAYMRKFGVSRITFRELAHLGQLPGVKKASW"
     gene            complement(4651..5112)
                     /locus_tag="U1041_000727"
     CDS             complement(4651..5112)
                     /locus_tag="U1041_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HEM4767852.1"
                     /translation="MALAKIVYASMTGNTEEIADIVASKLEELGLEVQVHECTTIETE
                     EILDADLIVVASYTYSYGGDGELPDEIVDFYADLADLDLTGKVYGVCGSGDTFYDDFC
                     SAVDDFDVMFGSRGATKGAENVKVDLAAEDEDIVNLEQFATDLVAKLDTMN"
     gene            5207..6151
                     /locus_tag="U1041_000728"
     CDS             5207..6151
                     /locus_tag="U1041_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEM4767853.1"
                     /translation="MTIYSKIIEKIREYDTIIIHRHQRPDPDAIGSQVGLQKLLQKNF
                     PEKTIKVTGFNESNLAWMAGMDVVADQDYQGALVIVTDTANTARVDDDRYTQGDFLIK
                     IDHHPNEEPYGDLLWVNTEASSCSEMIAELALQSQLELDGETARLLYAGIVGDTGRFL
                     YPATSSRTFEIVARLRQEDFDFARMSRQMDTIDFKIAKLTGYVYDNLEVDEHGAARVI
                     LTQDILEKYGVTDADTSFIVGAPGRIGTVQSWGIFVEQTDGNYRVRLRSKYIPINEIA
                     KRHDGGGHPLASGANSYSLSENEQIYQEIQEVVRNASK"
     gene            6138..7166
                     /locus_tag="U1041_000729"
     CDS             6138..7166
                     /locus_tag="U1041_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEM4767854.1"
                     /translation="MQASSRSLRLMGTIIETKIWHPDAEPILDQVEELLYLYKDRFSA
                     NDLTSELMEVNLNAGVQAVPVADDLYELIKLGKEHSLAQGSFLNITIGPLVQSWRIGF
                     SDAKLPTQEMISEKLQLINPRDIELDDEEQAVYLKKEGMAIDLGALAKGYVADKIVDF
                     LKRIGVEAGLINLGGNVLTFGQAPHNPDGYWRIGIQDPQKPRGENALVLKIGEESVVT
                     SGIYERTLTVNGKTYHHILSPETGYPMESQLASLTIVSKQSVDGEIWTTRLFGQEITQ
                     IYKMVEETDGIEAVLIGLDGRILVTSGLSEKILAGKERISDSLGSPSRGGFGARMTSD
                     LASGASVL"
     gene            7287..7529
                     /locus_tag="U1041_000730"
     CDS             7287..7529
                     /locus_tag="U1041_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000710758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEM4767855.1"
                     /translation="MKKDIHPEYRTVVFMDTTTGYKFLSGSTKKTSETVEFEGETYPL
                     IRVEISSDSHPFYTGRQKFTQADGRVDRFNKKYGLK"
     gene            7978..9207
                     /locus_tag="U1041_000731"
     CDS             7978..9207
                     /locus_tag="U1041_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM4767856.1"
                     /translation="MRKLMKNRGTIDSRVDYSLILPVFFLLVVGIISLYIAVSQDYPN
                     NVVQMVGQQIAWIGIGTVVAFLVMFFSTKFLWQITPYLYVLGLGLMVLPLFFYSPDLV
                     ASTGAKNWVTIGGMTLFQPSEFMKIAYIIMLSRVIVTFHKYYPNRKIREDFMLIGYMT
                     LFTIPVLTLLALQKDLGTSLVFVAIFSGMLLLSGVSWKILLPTALTGIVLVGGFMLIF
                     ISPGGTTFLHNLGMDTYKINRIAAWLDPFKNAQSTTYQQAQSLIAIGSGGLKGLGFNK
                     TNLLIPVRESDMIFTVIGEDFGFIGGTVLIVLYLLLIYRMLRVTLKSNNRYYTYISTG
                     YIMMLLFHVFENVGAATGLLPLTGIPLPFISQGGSSMVSNLIGVGLVLSMGYQSRLAD
                     EKETNRSRRYRKITIKR"
     gene            9221..9760
                     /locus_tag="U1041_000732"
     CDS             9221..9760
                     /locus_tag="U1041_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013990578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEM4767857.1"
                     /translation="MTRVAVVLADGFEEIEALAPVDVFRRAHFDCQIVGLDSHEVEGS
                     HGIRVQTDQVFDGDLSSFDLIVLPGGMPGSVHLRDSESLITELQRAVASGKSVAAICA
                     APIVLDKAGLLDSRHYTCFPGKEKDIPSGIHLEEDVVVDGPIITSRGAGTSLDFAYKL
                     VDLFGGDGESLAQTMVYHR"
     gene            9942..11894
                     /gene="gyrB"
                     /locus_tag="U1041_000733"
     CDS             9942..11894
                     /gene="gyrB"
                     /locus_tag="U1041_000733"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEM4767858.1"
                     /translation="MTEEIKDLQEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEG
                     LHHLVWEIVDNSIDEALAGFADKIEVYIEPDNSITVIDNGRGIPVDIQEKTGRPAVET
                     VFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVHVYKNGQVYFQEYKRGEVV
                     ADLEVVGETDRSGTTVHFTPDPEIFTETTEFDFAKLNKRIQELAFLNRGLNLSITDKR
                     EGVEQTKEYHYEGGIASYVEYLNENKDVIFENPIYTEGEMDDITVEVAMQYTTSYHEN
                     VVSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKILKENEDNLTGEDVREGLTAVI
                     SVKHPGPQFEGQTKTKLGNSEVVKITNRLFSDAFAEFLLENPQIARRIVEKGILASKA
                     RIAAKRAREVTRKKSGLEISNLPGKLADCSSNDATKTELFIVEGDSAGGSAKSGRDRE
                     FQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGADFDVSKARYQKLVIMTD
                     ADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSEIKEYIQPGVNQEQE
                     LQDALERHSTGRSKPTIQRYKGLGEMDDHQLWETTMNPENRLMARVSVDDAAEADKIF
                     DMLMGDKVEPRREFIEENAVYSTLDV"
     gene            11983..13707
                     /gene="ezrA"
                     /locus_tag="U1041_000734"
     CDS             11983..13707
                     /gene="ezrA"
                     /locus_tag="U1041_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HEM4767859.1"
                     /translation="MPTGTIILIVSIVIILIIAYVACLIVRKRNDNLLVALEERKEEL
                     FNLPVNEEVEAVKALHLIGQSQVSFREWNQKWVDLSLNSFADIENHLFEAEGYNNAFR
                     FVSAKNAIDSIDSQIDLIEEDIASIRHGLMELKEQEEKNSGRVKHALNLFDSLQEAVR
                     ENPDSYGETLPELEKQLKNIEVEFSEFVMLNSSGDPIEASEILDKAEEHMIALNQIMD
                     RIPSLIERVTKDFPEQLEDLESGYRKLVEQNYLFTEANIESQFQNIRVSIRENTALIV
                     SFDLDAAEAENEGIQAKIDHLYKVFNREIEANKEAVKISKNLPKFLEHVVQNTQLLDE
                     ESQRLNATYLLADSKLSRINQLKARLESIEIVVTESVEDIENPQVAYSILKERLDHSL
                     ASLKEIEEEQLVLADYLKSQELSENTARKKATLYINKLHTLKRYMEKRNLPGIPAEFL
                     TNFFRTSDHVEALIAELDYKRINIEVVNRLLENATYDMNQLEELAYLIVQNATLTEQL
                     LQYSNRYRSFDESVQKAFNRSLSIFEKDFDYQAAFEEISFALETVEPGVTERFVRSYE
                     KTREAIRY"
     gene            13759..14394
                     /gene="serB"
                     /locus_tag="U1041_000735"
     CDS             13759..14394
                     /gene="serB"
                     /locus_tag="U1041_000735"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEM4767860.1"
                     /translation="MTTGLLVMDVDSTLILEEGIDLLGEEAGLGAQVAAITERAMRGE
                     LDFEEALRERVALLKGLPVSVFDRIIKKIHFTPGAAELVSELKMRGYKVAVVSGGFHE
                     TVDRLAAQLELDYVRANRLEVVDGVLTGQVLGEIVTKDTKKACLEEWAAENGLSLSQT
                     IAMGDGANDLPMIQRAGIGVAFCAKPIVQEQAPCQINEKNLYKLIEILDSK"
     gene            complement(14424..15074)
                     /locus_tag="U1041_000736"
     CDS             complement(14424..15074)
                     /locus_tag="U1041_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4767861.1"
                     /translation="MYQTILFDLDGTLTDSGQGILNSVAYALEKMGIEEPDTANLNRF
                     IGPPLYESFSRFYQLSPEDTQSAVDAFRVYFKEKGMFENQLYPGIIPLLEELRTAGKT
                     LVIATSKPEIFAKQILEHFGIAHYFDVIAGASLDSSRISKADVIGHAINQLEAFPKHA
                     VMIGDREHDIEGARRHQLPAIGVLYGYGSKQEFEKAGATMIVETVQDLKKVLLTTE"
     gene            15182..16309
                     /locus_tag="U1041_000737"
     CDS             15182..16309
                     /locus_tag="U1041_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEM4767862.1"
                     /translation="MHILIAPDSFKESLSATKVAEAIKKGFSKVYPQAGYDLIPLGDG
                     GEGTVESLIQALSLDGTQTWVTGPFGDKIKVSYAVKDDLAVFEMAEIVGLASIPHGKR
                     SPLFIKTQGVGELIVELVQNGVKCIFIGVGGSASHDGGIGMAAGLGVKFYNREGKEVE
                     AIGAHIGEIVSFSTEDMLVDLSQVRIDLVTDVENPLCGPAGATFVFAGQKGLASAEFE
                     LVDKKMESFYKLVNPMLLDLAGAGAGGGMAAGLVQFAGARIQKGIDFVLDQLDFDHRV
                     AKADLVVVGEGRMDAQSLSGKTPIGVARRTPTGIPIIAICGSLKDDLPEFPFENICAA
                     FPIIASVESLEDTFQKAEKNLVRTAEQVARILQLGGQQRWN"
     gene            16300..16530
                     /locus_tag="U1041_000738"
     CDS             16300..16530
                     /locus_tag="U1041_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767863.1"
                     /translation="MELVKYVAIILFIFICLAKLVSVLRLSEKERGTETNVIKANGAM
                     FFFNEKNERGRLLGILCLTCIIFALIFILLYR"
     gene            complement(16537..16989)
                     /locus_tag="U1041_000739"
     CDS             complement(16537..16989)
                     /locus_tag="U1041_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1694 domain-containing protein"
                     /protein_id="HEM4767864.1"
                     /translation="MNDLNTTILQKASGETRLNPDEQRLYMGTYRERVVLLVSFDDLS
                     SEVVGNKFDTICQKLANSYSPLFLKLSPALSDKQQISLLKIAQNFGITTAIIDEKIGQ
                     SPYALVFHTNHAVDNEEVSLESIFPNLISKPEEKKEDAKPSFWKKLFG"
     gene            17139..18446
                     /gene="eno"
                     /locus_tag="U1041_000740"
     CDS             17139..18446
                     /gene="eno"
                     /locus_tag="U1041_000740"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002985288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEM4767865.1"
                     /translation="MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTG
                     EHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGFDVRDQQAIDRAMIALDGTPN
                     KGKLGANAILGVSIAVARAAADYLEVPLYTYLGGFNTKVLPTPMMNIINGGSHSDAPI
                     AFQEFMILPVGAPSFKEGLRWGAEVFHALKKILKARGLVTAVGDEGGFAPKFEGTEDG
                     VETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQI
                     DYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIK
                     EGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAG
                     QIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKGLNSFYNLKK"
     gene            18784..19413
                     /locus_tag="U1041_000741"
     CDS             18784..19413
                     /locus_tag="U1041_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4767866.1"
                     /translation="MIEWIFFDLGSTLLDEEAAYGYYIDKCVKKLESLDIEVSSDSYK
                     KKMVEYAHKSLDPIRATWHYFAPTEPRPLWTNEGVSLYPETIDALEKLSQNYRLGIIA
                     NQSSSVRDLLKEWGIESYFQLIILSEEVGLSKPDTTIFTLALQKTNIPADRVVYVGDR
                     YDNDILPAKSLGMWTVRILTGFGKHASENEKLKSDWVIPSLQEITNIFE"
     gene            complement(19459..19644)
                     /locus_tag="U1041_000742"
     CDS             complement(19459..19644)
                     /locus_tag="U1041_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767867.1"
                     /translation="MNPVDLFNQVKELIANKDFDGAKQFIEENKDQFGEYLEQAKGLL
                     SGSEGVNGLLDKVKGLF"
     gene            complement(19708..20712)
                     /locus_tag="U1041_000743"
     CDS             complement(19708..20712)
                     /locus_tag="U1041_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEM4767868.1"
                     /translation="MAIYFGTYTKRESKGIYKANFDSETGQLSNLELVTEEPNPTYLA
                     FDKAGHLYSVGAENGLGGIAAFNADYTLLNHVVSEGAPLCYVAVDETRDLVYGSNFHK
                     GQLLVYKRLADGSLELADVAQHEGSGPHENQASAHVHFSDLTPDKFLVTCDLGCDQVV
                     TYKVSDQGKVEKIATYQAAPGSGPRHIVFHPVAKIAYLICELNSTIEVLIYDGWGQFE
                     HLQTVSTLPEDHTGFNGTAAIRITKDGKFIYGSNRGNDSIAVYKTLADASLELVEIVP
                     TNGKTPRDFTLSPDEKHLIVVHQDSDNATVFERDAENGCLTELSHDFYVPEAVCVTFL
                     "
     gene            20848..22014
                     /locus_tag="U1041_000744"
     CDS             20848..22014
                     /locus_tag="U1041_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM4767869.1"
                     /translation="MEDKHQKFSLTWFFRLFLNSQAVTFLLVTLLTFLNIFIFSKISF
                     LFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKHKISRTVGISILFVLISLLIIWG
                     LAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTSLLQDQRFEQFRPTALELLNKVNDQAV
                     AYAQKFSTSAVNWASNLISTASQIIVAVLIMPFILFYLLRDGQYLNKHITQYLPTKWR
                     EPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIP
                     YLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITIL
                     FVLLTAGQMYGVLGVLLGIPIYASIKVLVKAAFEWYKAHSSLYEDEENEVVNEQ"
     gene            22004..23233
                     /locus_tag="U1041_000745"
     CDS             22004..23233
                     /locus_tag="U1041_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM4767870.1"
                     /translation="MNNSEKMLVCLDQQDLDKADKYFKRALVQDDSETLLSLAAYLEG
                     IGFFPQARQIYEQVKEEFPEVLINLAQIAFEDGMVEEAFAYLEEISEDSPAYVETLLV
                     KADLYQAEGLSDVAREKLLEASHLSDEPIILFGLAELDMELELFNEAISYYAQLDNRE
                     IYELTGVSTYQRIGIAYASLGKFEAAIEFLEKAVELEYDDQTVFELAALLFEREEYQK
                     ANLYFKQLDTINPDFEGYEYAYAQSLHAEHKIDDALAMTQKGLAKNDFDANLLLQASQ
                     YAYELHDEAGAEDYLLRAKEVADDSNELALRLSNLYLEQERFEEVVALFDEEVDNVLA
                     RWNMAKAYQALERDDEASELYDELAGELAENPEFLVDYVAVLRQLGRLDEAKEQARRY
                     IQLVPDDLAMQEFLNEE"
     gene            23237..23953
                     /gene="budA"
                     /locus_tag="U1041_000746"
     CDS             23237..23953
                     /gene="budA"
                     /locus_tag="U1041_000746"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019322637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HEM4767871.1"
                     /translation="MQVNRLFQYNTLGALMAGLYGGSLTVGELLEHGDLGLGTLDSID
                     GELIVLDGKAYQAKGAGEKPEVVEVPADMKVPYAAVIFHEAEVIFKQRFEMTSDELHQ
                     RIESYYDGENLFRSIKIKGTFSHMHVRMIPKSASDVRFAEVASRQPEYTAENISGTIV
                     GIWTPEIFHGVSVAGYHLHFISDDLTFGGHVMDYVISEGMVEVGPVDQLDQRFPVQDR
                     QYLFAKFNAKEVREDIDKAE"
     gene            complement(23980..25638)
                     /locus_tag="U1041_000747"
     CDS             complement(23980..25638)
                     /locus_tag="U1041_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_147463931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HEM4767872.1"
                     /translation="MSFDGFFLHHMTAELKANLEGGRIQKINQPFEQEIVLNIRSNRQ
                     SHKLLLSAHSVFGRVQLTQSDFTNPKVPNTFTMILRKYLQGAIIEEIRQLDNDRILEF
                     SVSNKDEIGDHIQATLIVEIMGKHSNIILVDKSEQKIIEAIKHVGFSQNSYRTILPGS
                     TYIRPPETHSLNPYTVSDEKLFEILSTQELSPKNLQQVFQGLGRDTASELASHLQTDR
                     LKNFRAFFDQATQPSLTDKSYAALPFANSPENQPHFESLSSLLDFYYQDKAERDRVAQ
                     QANELIKRVASELEKNRKKLVKQEQELADTETAELVRQKGELLTTYLHQVPNDQASVR
                     LDNYYTGEELEIELDVALTPSQNAQRYFKKYQKLKEAVKHLTNLIEETKATIVYLESV
                     DTMLGQASLAEIDEIREELIETGYLKRRHREKIHKRQKPERYLATDGKTIILVGKNNL
                     QNDELTFKMAKKGELWFHAKDIPGSHVVITDNLDPSDEVKTDAAELAAYFSKARHSNL
                     VQVDMIEAKKLHKPTGGKPGFVTYRGQKTLRVTPTEDKIKSMKI"
BASE COUNT         7511 a         4715 c         5845 g         7656 t
ORIGIN      
        1 ggtttgatta tcggtgttag tggcaatacc gtccaaacaa tcgagcaaaa cttggtaggt
       61 aatttgtcgg tcggtggtcc tgctcaatat gctagccagc aaatcagcaa ccttgtcggc
      121 tggttttatc caccttacag cgactctact gcagtgacaa cacaggcaag tagtggcaat
      181 ctcggtaagg tcaaagacga gcaggggaca atgaccgtta aagtatctct gctcaatgtc
      241 agagacaagc ctggtgtaga cggtaaagtt gtggcaacgt acacgaatgg cgagcagttt
      301 aattatgatt cggtctatat tgccgatgga tacatttggg tatcgtatgt tagccatagc
      361 ggtgtacgtc gctatgtagc agcaggcgag gagtcaaatc ggcgcaatgt cgtaccttat
      421 ggtacgttta aatagttttt caacccagcg gtctgctggt ttttttattt gcgaagattt
      481 ttcttgacaa gttatgataa gttgtgaaat aatgtacgtg gttaagaaaa tagatgaaat
      541 tccgttcatc acctcctttc taaccgctct ctatctgtgg caacacagac atataatcga
      601 agcacattat atggcttggc agagcttaag aactgttctc ctgcgataag cccaagaagc
      661 acaatggaga attagagccg tcaactctaa tcgttagccc cgaccggagg atagatccgg
      721 tccgtgcttt ttatttttga gaaagaatac tgttgtggaa attagagaaa tagttgagga
      781 ttatgagtta aattttaatg ggcgttcttg tttgtttata actgggtaca aaggattaga
      841 agagtttatt gtaaaatttg aaacgttaga tttatttcat cttttaggta tacatataag
      901 ttaaaaacag gtttatacgc acgtacttgg ttagaacaag taaagacagg caactttagg
      961 ttagaagagt tttatagcaa tgagagtttt cgtgaagttt taccaagaat tgaaaattat
     1021 gattttttct atgagatttt ttatcgtgac aaagttaagg tatgcatctt agacaaagac
     1081 ttatcaagga acatgatgaa attgagtgtc gttttttata aagataagca cagaaatgta
     1141 gtgattttag ggttgaaaag ggataaacta gggaactttc gcccagcgac tctgcatgag
     1201 agtagaggta atagatactc acgaaataaa aagactttga taaagagtat aaagtggcaa
     1261 taattccata ctgtgtcaag ttctaacttt ccttgttata gtacacccag cgtttgctgg
     1321 gcttttttgt ttgcgaagat aatctcaaga tagaatggaa ccgcacatta attcgcacat
     1381 ggaatttgct tggaaaatag acaaacgcag tcgtatcaat ggtttgcatg atttctattc
     1441 gcacatggaa aataaatata ccttgtgcat tattgtcaaa atagccattt tgtcaatgat
     1501 ggttgcgaag atttttcttg acaaaatata gggatgcgtg gaataataat tgtgaacaga
     1561 aacggtttaa acacctcctt tctatgttcc gacatcgctt gtcgttaaac ccatgccttg
     1621 tggcaatgag ggggcggagg gacgcgctcg ttaacagaag tatcccattg gaaatgcgtc
     1681 ctgccaatat cccgttggta ggattttttt gtggtaggtg tagatgaaga gtaagagatt
     1741 gaaacttggt caaattgatt tacaaatgtg taaagatttt gatattatcc aagctatgga
     1801 ttatgatttt caaagtaaga aaatcttgaa taaaggtcgt ggttttgcga ttgttttggt
     1861 gcaaatccaa gaattgactt tccttattcc cctgcgtagt tatatgccaa aaaggtatca
     1921 gttaaagtat aaattgcgcc catcaaacag ggtagggtat gtcgaaggat tggatttagg
     1981 gaaatctctt attttggaag ataagaaata tcttttgaat actaactttc gattgcgaga
     2041 ggtgacagac tactataagt tgatggataa cgataaaatg attatcaata aacttattaa
     2101 agttattgtt gattttaata aagctgtatc ggataaggat attcacaaac taacagaccc
     2161 taaacgtttt aagttttcaa cctttgtcaa ttacaaagag cgtctgaaaa ctatttctga
     2221 gaaagattat ttaaaatagt gatagcgagg tcagaaaggc tcctgacgca ctcgagagag
     2281 tacctgagat gttggatacg ccacccaacc gctatcattg tatttcagaa cccctcagcg
     2341 tttgctgggg gctttttttg ttacccgaat ttcaaaaaaa tagcgttttt tcaaaatttg
     2401 atagaaaaat acttactttt atctcggacg tttttaaaaa ttgccgtttt tgcggacata
     2461 ataaaaggcc ttgtccagag gtcttgagaa gttgatttat ggagtgtttt tttagtgcgt
     2521 ctgccccaaa ttcgccccaa aagttttaaa aaatgagtat agataggtca aaaatataac
     2581 aaaaatagct aaaatcagcg tattttttaa aacatacaac aacgtgtttt gctataaaat
     2641 tcctgcaggg gagatggaga gtatacgaaa aagcctaaat gataggcttt tttgcattat
     2701 tgaatttcct cacctgcacc ccataataaa tagtctgttt tctgtttata agataagcta
     2761 tggcaagtac aggaatagca tagggcagga tattagcgcc gaatacttca taactaatga
     2821 agagaggagc cagtaaggta ttggtggctg ttccaaatac ggcacaatac ccaagggctg
     2881 caacaagttc agttggtaga cctagtaatc ctgctaaaac agccccagca cttgctccaa
     2941 tcgcaaagag gggagtaact tcgcctcctt gaaaacctgc agccaaacaa agacaggtta
     3001 gtaggagttt tagtagccaa tcgaaagcaa acacctgttc cccagctaaa ctggcatcaa
     3061 tcaaattggt tccgagacca gcataacgac cttgatggaa gaaaaatagt agaacgatca
     3121 gtccaactcc catgatagct attttaatgt aaggatttgg aagccatcga gtcgagatgc
     3181 tttttgcttg cgccagaaac caagcaaata aattgccgat gaaaccgaag caaagggcaa
     3241 taaatagcca tttgaaacta tctgtaaact ggaatgaggt agtagcgatg gtgtgcgaaa
     3301 atttctctaa tcccaataaa tgggaagtag tagaagccgt gaaagcggca actagacaat
     3361 aggggagact agtccaagaa tattggccaa cgattaatac ctcaatggca aagaaactag
     3421 cagcccatgg tgtttgaaat aaccctgcaa aacctgcggc cataccaatc tttgttatca
     3481 tatctttggg caagtgtgtg aaaccatgtt tttgtaacca gtgtgagaga ctggctccaa
     3541 gttggacagc tacaccttcg cgaccaacgg aagcaccgac aagatgactg agccaagttg
     3601 tagagatgat gagtggaatg agaactggag aaatttgcgc tttctcccct tgtccagctt
     3661 tgaagactaa gcccatgcct gcttggactt cccttcccca tttttgataa atgaaaacaa
     3721 tcaacacacc tgcaagtggc agaaagggga tgagatatgt aaaatattca gatcgtaact
     3781 ctccaacccc tagtagaatt ttcccaaaaa gtgtggtgat aattcctgca ccgactccaa
     3841 ttaagctgga aaagaaaagg agttggatgg cttgtttcat cttattgctc atgattcgct
     3901 aacttggaag attgataggt tcttgattgg gccataatat cgctaaaggt tgcttgaatg
     3961 gcagagcggt agtcatcctt ttgaactaat tttccaactc tttcaaggac agcattttct
     4021 cggctggtat ccaaaacagg cttacctgtt gctcgtttat aggctgtaac ttggtcgacc
     4081 aactccattc gtttttcaag tagttcaacc aattggctat caatcgtgtt aatctgttcg
     4141 cggatgcaat ccaaattcat cttataaacc tccgtatatt gtttcagttg ttttttagta
     4201 tagcaaaaaa caaggcagaa tactagcctt gtttgaggaa gtcaccaact tgcttttttt
     4261 accccaggaa gttgaccaag atgggctaat tcacggaagg taatccgact cacaccgaat
     4321 tttcgcatat aggcatgcgg acggccatca gtcctgtcgc ggtatttcag tcgatttgga
     4381 tttgagtcgc gaggcaattt tcgaagtgct tgatagtcac ctttttcttt gagactttta
     4441 cgtaaatccg catagcgctc gattaactcc aactgtctct gatagcgtgc catttttgat
     4501 tttttagcca taaaattctc cttttttaaa aaaattaacc agttaattat atatcgaaac
     4561 tattaagatt gcaagcaata ggtgtacaat cttaataaaa ggctaaaaga aaacagacta
     4621 gacctattga taagccagtc tgtctgtcag ttaattcatt gtatctagtt tagcaacaag
     4681 gtctgtcgca aattgctcaa ggttaacaat atcctcatct tcagcggcaa ggtctacctt
     4741 aacattttcg gcacccttag ttgcaccacg tgaaccaaac atgacatcaa agtcatctac
     4801 tgcactacag aagtcatcat agaaggtatc gccagaacca caaacaccgt agaccttacc
     4861 agtcaaatct aagtcagcta ggtcagcata gaaatcaaca atttcatctg gaagctcacc
     4921 gtctccacca taagaatagg tgtagctggc taccacgatg agatctgcat ccaagatttc
     4981 ttcagtttca atagtcgtac attcgtgaac ctgtacttcc aaacctaact cttctagctt
     5041 actggcgacg atgtcagcaa tttcttctgt gttaccagtc atactagcgt aaactatttt
     5101 tgctagtgcc ataatttcct ccaaattaca tagtaattcc attataccat actcccatca
     5161 ttttcaaaag gggaagttta tgctaaaatg atgaaaagga gttgctatga caatttacag
     5221 taaaattatt gaaaaaattc gcgaatacga cacaatcatc attcatcgtc accaacgacc
     5281 agatccggat gccattggca gccaggttgg tttgcaaaag ctcttgcaga agaattttcc
     5341 tgaaaaaacc atcaaggtaa ctggtttcaa tgagtcgaat cttgcctgga tggcaggaat
     5401 ggatgtagtt gcagaccaag attatcaagg agccttggtt atcgtgacag acactgccaa
     5461 tacggcgcgt gtggatgatg accgctacac tcagggtgat ttcctgatta aaatcgacca
     5521 ccatccaaat gaagagccat acggcgactt gctctgggtc aatactgagg ctagctcatg
     5581 cagtgaaatg attgcagaat tggcccttca aagtcagttg gaattggacg gggaaactgc
     5641 tcgtctgcta tatgctggta ttgttggcga tacaggccgc tttctctatc cggcaaccag
     5701 ctcgcgcact tttgaaattg ttgcccgact tcgtcaggaa gattttgact ttgcaaggat
     5761 gtctcgccag atggatacca ttgatttcaa gattgccaag ctgaccggtt acgtttacga
     5821 caacttggaa gtggatgaac atggtgcggc acgtgttatt ttgacgcagg atattctcga
     5881 aaaatacggg gtgaccgatg cggatacatc atttatcgtt ggggctccag gacggattgg
     5941 cactgtacaa tcttggggga tttttgtgga acaaactgac ggaaattaca gggttcgctt
     6001 acgcagcaag tacattccga taaacgagat tgccaagcgc cacgatggcg gtggccatcc
     6061 actagccagc ggtgctaact cttattccct ctccgaaaat gagcaaatct atcaagaaat
     6121 tcaagaggtc gtgaggaatg caagcaagta gccgttccct tcgtctaatg gggactatca
     6181 tagaaactaa aatatggcat ccagatgcag aaccgatttt ggatcaggta gaagagcttc
     6241 tttatctcta caaggatcgg ttttctgcca atgacttgac ctctgaatta atggaggtca
     6301 acctcaatgc gggtgttcag gcggttcctg ttgccgatga cctgtatgaa ttgattaaac
     6361 tgggcaaaga acacagtctg gctcagggat cttttttgaa tattaccatc ggtccccttg
     6421 tgcaaagctg gcggattgga tttagcgatg ccaaacttcc aactcaagaa atgatcagtg
     6481 aaaaactcca gctcatcaat ccaagggaca tcgaattaga tgatgaggag caggcagtct
     6541 atttgaaaaa agaaggtatg gccattgatc tgggtgctct tgctaaagga tatgtagcag
     6601 ataagattgt cgacttcttg aaaagaatag gtgtggaggc tggattgatt aacttgggag
     6661 gcaatgtctt aactttcggt caggctccgc ataatccaga tggctattgg cgaattggga
     6721 ttcaggatcc tcagaaacca cgtggtgaga atgccctcgt cctcaaaata ggagaagaat
     6781 cagtagttac ctctggtatt tacgaaagaa cccttaccgt gaatggaaag acctatcatc
     6841 atattttgag tcccgagacc ggctatccaa tggagtcgca gctggctagt ttgaccattg
     6901 tgtccaaaca atctgttgac ggtgagattt ggacgactcg actgtttggt caagaaataa
     6961 ctcagattta taagatggta gaagaaacgg atggtatcga agcagttctg attgggctgg
     7021 atggcaggat tctagtgacc tcaggacttt ctgaaaaaat actggcaggt aaggagcgga
     7081 tttcagacag tttgggcagc ccatcaagag ggggatttgg tgcaagaatg acttctgatc
     7141 ttgcttctgg agcatctgtc ctataatctc ttaaaaatct ctaaaaaatc ggtaaaaata
     7201 cttgccagaa gaaaaaagtt ttggtaaact taaatggtta taatctatgg ctcggaaaga
     7261 gtccatggca gaaaggaatt tttaaaatga aaaaagatat ccatccagaa tatcgcactg
     7321 ttgtcttcat ggacacaact actggctaca agttccttag tggttcaact aagaaaacta
     7381 gcgaaacagt tgaattcgaa ggtgaaactt acccattgat ccgtgtggaa atttcatcag
     7441 actcacatcc attctatact ggacgtcaaa agttcactca agcagatgga cgtgtggatc
     7501 gcttcaacaa aaaatacggt ctcaaataaa aaaacagtcc ttaacggact gttttttcac
     7561 gagcttgaaa ataaaagagc gagttatggt ccagtggacc attttttctt tgactctaga
     7621 aataagagag ggcttttttc gtgcgtgatt gccaaaatga ttgccattgg tttacatact
     7681 catggctttg gcaaacttat ggggtgtgtg aaggtaaagc attatatttc agtctgttcg
     7741 aaggtatgaa gatatacgta ttttatgatt tgtgcactag taatactctt cgaaaatcaa
     7801 aattatccgt tgtcacgagc cttgatgaac tccagttcta tcttcgactt cgtttcctag
     7861 gctacttttg attttcgttg agtataaatc gtatcccctc agatgtaact agatttttag
     7921 tttcaatgag agatgatttc tgctataatg gaacgagtaa gaatttgaag tgaaggtatg
     7981 aggaaattga tgaaaaatag gggcacaatc gatagtcgag tagactactc acttatttta
     8041 ccggtctttt ttttattagt tgtggggatt atttctctct acattgcggt tagtcaagat
     8101 tatccgaata atgttgtaca gatggttggt caacaaattg cttggatagg aattggaaca
     8161 gtggtagctt ttttggtcat gttcttttcc actaagtttc tgtggcaaat cacaccttac
     8221 ttgtacgtac ttgggctagg acttatggta ttgcctttgt ttttctacag tccagactta
     8281 gtagcgtcaa cgggagcaaa aaactgggta acgattggtg gaatgactct ttttcaacca
     8341 tccgaattta tgaaaatagc ctacatcatt atgttgtcaa gggtgattgt cacctttcat
     8401 aaatattatc caaatcgaaa aattcgtgag gattttatgt tgattggtta tatgacactg
     8461 tttactatcc cagtcttgac tttgttggcc ttacagaaag atttaggaac ctccttagta
     8521 tttgtagcaa tctttagcgg aatgcttcta ttatctggag tttcttggaa aattctatta
     8581 ccgactgcct taacggggat cgttttggtt ggtggattta tgctgatttt tatttctcct
     8641 ggtggaacga cattcctcca caatttgggg atggatactt ataaaatcaa tcgtattgca
     8701 gcctggcttg atccctttaa aaatgcccaa tcaacgacct accagcaagc tcaaagtttg
     8761 atagctatcg gaagtggtgg cctaaaagga ctaggtttca ataaaacaaa tcttcttata
     8821 cctgttcgag aaagtgatat gatttttaca gtgattggag aggactttgg ttttattggt
     8881 gggacggtat tgattgtact atacttgttg ctcatttatc gaatgctgcg ggtaacgttg
     8941 aagtcaaaca atcgatacta cacctacata tcaactggct atatcatgat gctcttgttc
     9001 catgtgtttg aaaatgttgg cgctgcaacg ggtttgttgc ccttaacagg tattcctttg
     9061 ccgtttatct ctcaaggtgg ctcgtctatg gtttcaaatc tgattggtgt tggtctagtg
     9121 ctgtcaatgg ggtatcagtc acgactagct gatgagaagg aaacaaatcg atcacgtcgc
     9181 tatagaaaaa ttacgataaa acgttagaaa gttggtttat atgacaagag ttgcggttgt
     9241 tttagccgat ggttttgaag aaatcgaagc attggcccct gtagatgtat ttcgtcgagc
     9301 tcatttcgac tgtcagattg ttggtttaga tagtcatgaa gtggagggat cgcacggtat
     9361 tcgtgttcaa actgaccaag tctttgatgg agacctgtct tcctttgatc tgattgtttt
     9421 accaggagga atgccaggtt ctgttcacct tagagattca gagtcactga ttacggaatt
     9481 gcaaagagcg gttgcatcag gaaaatcagt agcagcaatc tgtgcggctc caatcgttct
     9541 ggataaggct ggtctgttag atagtcgtca ctatacatgt ttcccaggga aagaaaaaga
     9601 cattccgtca ggtattcatc tggaagagga tgtggtcgtt gatggtccaa ttatcactag
     9661 ccgaggtgct ggaacaagtt tggatttcgc ctataaattg gttgatttat ttggtggaga
     9721 tggggaaagc ctagctcaaa caatggttta tcatcgttaa agtaatgaag aagatggagc
     9781 taatgtttcc tcttcttttt tctatcaaaa tattagaaaa tatggtataa taaagggtat
     9841 tcgttagaat gatttttgct ctaaaaatat gtctcgcttt tatccagatg gattggcttt
     9901 tctattttta aggagcaaca aatagaaaat aaggaaaaga aatgacagaa gaaatcaaag
     9961 atttacaaga gaaggctcaa gaatatgatg ccagtcagat tcaagtcttg gaaggtcttg
    10021 aagctgttcg aatgcgtcca gggatgtata tcggctcaac atctaaagaa ggtctccatc
    10081 acttggtttg ggaaattgtc gacaactcaa tcgatgaggc gctggctggt tttgcggata
    10141 aaattgaagt ttatattgag ccagataact ccatcacggt tattgataat ggacgtggta
    10201 ttccggtaga tattcaggaa aaaactggtc gtccagcggt agaaactgtc tttacagtgc
    10261 tccatgcagg tggtaaattt ggcggaggcg gttataaggt ctcaggggga ttgcacggcg
    10321 taggttcatc agtcgtaaac gccctatcta ctcagttaga cgtccatgtc tacaaaaatg
    10381 gtcaggtcta tttccaagag tataaacgtg gtgaagtcgt tgcagatttg gaggttgttg
    10441 gagaaacaga ccgttctggt acaactgtac attttacacc tgatccagaa atttttactg
    10501 agacgactga gttcgacttt gcaaaattaa ataagcggat ccaagaattg gccttcctaa
    10561 atcgtggttt aaatctctct attacggaca aacgtgaggg agtagagcaa acaaaggaat
    10621 atcactatga aggtggtatt gcttcctacg ttgagtatct taatgagaac aaggatgtca
    10681 tttttgagaa ccctatctat acagaagggg agatggatga tattaccgtt gaggttgcca
    10741 tgcaatatac gacgagttat catgaaaacg tagttagttt tgccaacaat attcacacac
    10801 atgaaggtgg tacccatgag caaggattcc gtacagctct gacacgtgtt atcaacgact
    10861 acgccaagaa aaataaaatt ctcaaagaaa atgaggataa tttgactggt gaagatgtgc
    10921 gtgaaggctt gacagcggtc atttctgtta agcacccagg tcctcaattt gagggacaaa
    10981 ctaagacaaa acttgggaat agtgaagtgg tcaaaattac caaccgcctt ttctctgatg
    11041 cctttgcaga atttcttttg gaaaatcccc agattgctag acggattgtt gaaaaaggga
    11101 ttttggcaag caaggctcgt attgctgcta agcgtgcgcg tgaggtaact cgtaagaaat
    11161 cgggtcttga gatttcaaac ctcccaggta agttagcaga ctgttcctca aatgatgcaa
    11221 cgaagacaga gcttttcatt gttgaggggg actcagccgg tggttcagct aaatccggtc
    11281 gcgaccgtga atttcaggct attttaccga ttcgtggtaa gattttgaac gtagaaaaag
    11341 ccagcatgga caagattttg gccaacgaag aaatccgtag tctatttaca gctatgggaa
    11401 ctggctttgg tgcggatttc gacgttagca aggcacgtta tcaaaaatta gtcattatga
    11461 cagatgccga tgtcgatggt gcccatattc ggacactcct tctgacatta ttttaccgct
    11521 acatgcgtcc tgttgtagaa gcgggatacg tatatatcgc tcaaccacct atttacggta
    11581 tcaaggttgg aagtgagata aaagaatata ttcaacctgg ggttaatcaa gagcaagaat
    11641 tgcaagatgc cttagaaaga catagtacgg gacggtccaa gccaacgatc caacgttaca
    11701 aaggtttggg agaaatggat gatcatcagt tgtgggaaac tacgatgaat cctgaaaatc
    11761 gtctcatggc acgcgtttca gttgatgatg cggcagaagc cgataagatt tttgacatgt
    11821 taatggggga taaggttgaa cctcgtcgag agtttatcga ggaaaatgct gtttattcaa
    11881 cattggatgt ctaaaaacta aaaaaacaag tgcatatact agagatttat ggtataatta
    11941 agcgatattt tctagtaatt actatgagct aaggagattt acatgcctac aggaacaatc
    12001 atcttaatcg tttcgattgt tattatttta atcattgcct atgtagcttg cctgattgtt
    12061 cgtaaacgaa atgacaacct tttggttgca ttggaagaac gtaaggaaga gctatttaac
    12121 cttccagtta atgaagaagt cgaagctgtc aaagcacttc atttgattgg tcaaagtcag
    12181 gtgtcattcc gtgaatggaa tcaaaaatgg gttgatttgt cgctcaattc atttgccgac
    12241 attgaaaatc atctctttga ggcagaaggt tataacaatg cctttcgctt tgtgagtgca
    12301 aagaatgcta tcgacagtat cgacagccaa attgatttaa ttgaagaaga catcgcctct
    12361 atccgtcatg gtttgatgga gttgaaggag caagaagaga aaaactctgg tcgcgtaaaa
    12421 catgcgttaa atttgttcga tagtttacag gaagctgttc gtgaaaatcc agatagctac
    12481 ggtgagacac taccagaact tgagaaacaa ttgaaaaata ttgaagttga gttttctgaa
    12541 tttgtgatgc tcaattcctc aggtgacccg attgaagctt ctgaaatcct tgataaggct
    12601 gaagagcata tgattgctct caatcaaatc atggatcgca ttccaagttt gattgaacga
    12661 gttacaaaag atttcccaga gcaattggaa gatttggagt cgggttatcg taaactggtt
    12721 gagcagaatt atttgttcac agaagctaac atcgagtcac agttccaaaa tattcgcgtt
    12781 tcaattcgtg aaaatactgc tttgattgtt tcctttgatt tggatgccgc agaagctgaa
    12841 aatgagggaa ttcaagcaaa aattgatcat ttgtataaag tcttcaatcg tgaaatcgaa
    12901 gcgaataagg aagctgttaa gattagtaaa aacttgccaa aattcttgga gcatgttgtc
    12961 caaaatacac agctcttgga tgaggaaagc caacgcctaa acgcaactta cttgctggca
    13021 gatagcaaac tttcacgtat caatcagctt aaagctcgtt tggaatcgat tgaaattgtt
    13081 gttacagaaa gtgtggaaga cattgaaaat ccacaagttg catattctat tttgaaagag
    13141 cgtttggatc attcattggc aagtttgaaa gaaatcgaag aggagcagct tgttttagct
    13201 gactatctga aatcacaaga attgtcagag aacacagcgc gtaagaaagc tacactttat
    13261 atcaacaaat tgcataccct taagcgttat atggaaaaac gcaaccttcc aggaattcca
    13321 gctgaatttt taacaaactt ctttagaacg agcgatcatg tggaagcctt gattgccgag
    13381 ttagactata aacgaatcaa tatcgaagta gttaaccgtt tgttggaaaa tgcaacgtat
    13441 gatatgaatc aattggaaga gttggcgtat ttgattgtgc aaaatgcgac tttaacagag
    13501 cagttgctac aatactctaa ccgttatcgt tcattcgatg aaagtgtgca aaaagcattt
    13561 aaccgttcat tatcaatttt tgaaaaggat tttgattacc aagcagcatt tgaagaaatt
    13621 tcatttgctc tggaaacagt tgaacctggt gtaacagagc gttttgtacg ttcatacgaa
    13681 aaaactcgtg aagccattcg ctactagata aaaagccatt tggcttttta tttttatact
    13741 ttgaaaggaa tatcggagat gacaactgga ttattagtta tggatgttga ttcaacatta
    13801 attttggaag aaggaataga tttacttgga gaagaggccg gtttaggagc gcaagttgca
    13861 gcaattaccg aacgtgctat gcgtggggaa ttggattttg aagaagcctt acgtgaacgt
    13921 gtggcgttgt taaagggact gcctgtttct gtgtttgatc gaattatcaa aaaaatccac
    13981 tttacgcctg gagcagcaga attagtctca gaattaaaaa tgcgaggcta taaggtagca
    14041 gtagtttcag gcgggtttca tgaaacagtc gatcgactag ctgcacagtt agagttagac
    14101 tatgttcggg ctaatcgatt agaagtagta gatggagtat tgacgggaca agtattgggg
    14161 gaaattgtaa cgaaagatac taaaaaagca tgtttagaag aatgggcggc agaaaatggg
    14221 ctgagtctat ctcaaacgat tgctatgggg gatggagcaa atgatctacc aatgattcaa
    14281 cgagcaggaa ttggagtagc tttctgtgct aaaccgattg tccaagaaca ggcgccctgc
    14341 caaataaatg aaaaaaatct ctataaacta atagagattt tagatagtaa ataacgagaa
    14401 gtagctgagt gctgactttt cttctattct gttgtcagta aaaccttttt caaatcttgg
    14461 acggtttcga ctatcatggt ggccccagcc ttttcaaatt cctgtttgct cccatagccg
    14521 taaagaacac cgatggcggg aagttggtgc ctgcgtgctc cttcaatgtc atgttcccta
    14581 tctccaatca tcacagcatg ttttggaaat gcttctaatt gatttatagc atggccgatg
    14641 acgtccgcct tactgatgcg actactatcc agactagcac cggcaatgac atcaaagtag
    14701 tgagcgatac caaaatgttc tagaatctgt ttggcaaata tttctggctt tgaggtagca
    14761 attactagtg tttttccagc cgttctcaat tcttcaagca gagggatgat tccaggatag
    14821 agttgatttt caaacattcc tttttcttta aaatagacac ggaaagcatc aactgcactt
    14881 tgtgtatctt cagggctgag ttggtagaat cgtgaaaaag attcatagag tggcgggccg
    14941 atgaaccggt ttaaattggc tgtatctggt tcttcaattc ccattttttc tagtgcgtag
    15001 gcgacggagt ttaagattcc ttgtccagaa tcagtaagag ttccatctaa gtcaaataat
    15061 atagtttgat acatacttat ctcctttctt tcagtataac acagacgatg aaaaacagaa
    15121 aagatttatt gaaagctgaa taggagtgtg atatactaat aatataaagg aggttagtac
    15181 catgcatatt ctcattgctc cggattcatt taaagagtct ctatcagcta caaaggttgc
    15241 tgaagcgatt aaaaaaggat tttctaaggt ttaccctcaa gcagggtatg acttaattcc
    15301 cctaggagat ggtggcgaag ggacagttga gagtctaata caggccttat ccttggatgg
    15361 aacccagact tgggtgacag gtccatttgg agataaaatt aaggtttcct atgcggttaa
    15421 agatgatctt gcggtttttg aaatggctga gattgtaggg ctggcaagta tcccgcatgg
    15481 aaaaaggagt cctctcttta ttaagacaca aggggttggg gagctgattg tggagctcgt
    15541 tcaaaatggt gttaagtgca tatttatagg agtaggtggc tctgccagtc atgatggtgg
    15601 tatcggaatg gcggcaggtt taggagtgaa attttataat cgagagggaa aagaagtaga
    15661 ggcaattgga gctcatattg gggagattgt cagcttttcc acagaggata tgttggtaga
    15721 tctatctcag gtcaggattg atttggtaac ggatgtggag aatccgcttt gcggaccagc
    15781 gggtgccaca tttgtttttg caggtcagaa aggtcttgcc tctgctgaat ttgaactagt
    15841 agacaagaaa atggagtcct tttataaatt agttaatcca atgctactcg atttagcagg
    15901 agcgggtgct ggaggaggta tggcagcagg tttagtccaa tttgcaggtg ctcgcattca
    15961 aaaaggcatc gactttgtct tggatcagtt ggactttgat catcgcgtcg ccaaagcgga
    16021 tctggttgtg gtcggagaag ggcggatgga tgcccaaagc ttatcaggga agactccgat
    16081 aggagtagct agacgtacgc cgacggggat tcccatcatt gcaatttgtg gtagcctcaa
    16141 agacgatctt cccgagtttc cttttgaaaa tatctgcgcc gcttttccga taattgcaag
    16201 cgttgaaagt ttggaggaca cgtttcaaaa agcagaaaaa aacctggtcc gcacggcaga
    16261 acaggtggca agaattcttc agttaggagg ccaacaaaga tggaattagt gaaatatgtg
    16321 gctattatct tatttatttt tatttgtctt gcaaagctag tatctgtttt gagactttcc
    16381 gaaaaggaaa gaggaacaga aacgaatgta ataaaggcaa acggagcaat gttctttttc
    16441 aatgaaaaaa atgaaagagg cagattgcta ggaatccttt gtctaacctg tattattttt
    16501 gctttaatat ttatactgct ttatcgataa ataagtctaa ccaaataatt ttttccagaa
    16561 ggaaggtttt gcatcttcct ttttttcttc tggttttgag ataagatttg gaaatatgga
    16621 ttctaagcta acttcttcat tatccacagc gtgatttgtg tgaaagacaa gtgcgtaggg
    16681 agactgtcct attttttcat cgatgatagc ggtagtaata ccgaagttct gagcaatttt
    16741 tagtagtgaa atttgttgct tgtcagacag ggctggcgag agtttgagga atagaggaga
    16801 gtagctgttt gctagttttt ggcaaattgt atcgaactta tttccgacga cttcactact
    16861 caaatcgtca aaggaaacga gcaggacaac ccgttcgcga taggttccca tgtatagacg
    16921 ttgttcatct ggattcaatc gtgtttcgcc agaggctttc tgtagtatgg tagtatttaa
    16981 atcgttcatg atttcagtat aacatactca gttaactttg aaaaggaagg cgtttacatt
    17041 atttctttca gtaaaataac ctgttttttc ttgaaaaatc ccttctttta gggtatgata
    17101 gctatgtaac tattttaaac tcaaaggaga gtaatataat gtcaattatt actgatgttt
    17161 acgctcgcga agtccttgac tcacgcggta accctacact tgaagttgaa gtttatactg
    17221 aatcaggtgc tttcggacgt ggtatggttc cttcaggagc ttctactggt gagcacgaag
    17281 cagttgagct tcgcgacggt gacaaatctc gttaccttgg tcttggtact caaaaagctg
    17341 ttgacaatgt gaacaacgtg attgctgacg ctatcatcgg ttttgacgtt cgtgatcaac
    17401 aagctatcga ccgcgctatg atcgctcttg acggtactcc taacaaaggt aaattgggtg
    17461 caaacgcaat cctcggtgtt tctatcgctg ttgcgcgtgc tgctgctgac taccttgaag
    17521 tgccacttta cacttacctt ggtggattca acactaaagt attgccaact ccaatgatga
    17581 acatcatcaa cggtggttct cactcagacg ctccaatcgc tttccaagaa ttcatgatct
    17641 tgccagttgg cgctccttca ttcaaagaag gtcttcgttg gggtgctgaa gtattccatg
    17701 ctttgaagaa aatcttgaaa gctcgtggtt tggtaacagc tgttggtgac gaaggtggtt
    17761 tcgctcctaa gttcgaagga actgaagacg gtgttgaaac aatcatcgaa gctatcgaag
    17821 ctgctggtta cgaagctggc gaaaacggca tcatgattgg tttcgactgt gcgtcatctg
    17881 aattctacga caaagagcgt aaagtttacg actacactaa attcgaaggt gagggcgctg
    17941 ctgttcgtac ttctgcagag caaattgatt accttgaaga attggttaac aaatacccaa
    18001 tcatcactat cgaagatggt atggatgaga acgactggga tggctggaaa gctcttactg
    18061 agcgtcttgg taaacgcgtt caattggttg gtgacgactt cttcgtaaca aacactgact
    18121 accttgcacg tggtatcaaa gaaggtgctg ctaactcaat ccttatcaaa gttaaccaaa
    18181 tcggtactct tactgaaaca tttgaagcta tcgaaatggc taaagaagct ggctacactg
    18241 ccgttgtatc acaccgttca ggtgaaactg aagattcaac aatcgctgac atcgcagttg
    18301 caactaacgc aggccaaatc aagactggtt cattgtcacg tacagaccgt atcgctaaat
    18361 acaaccaatt gcttcgtatc gaagaccaac ttggtgaagt tgcagtctac aaaggcttga
    18421 actcattcta caacttgaaa aaataaaaca gtctgggaga ttgttttatc cctgagctag
    18481 aatagcgaag gttataataa gaacaagtct ggaaatttcc agacttgttt ttcgtagtac
    18541 agtgtactaa tttatccccg agttagaata acgagggtta tagtaaaaac aagtccgaag
    18601 attttcggac ttgtttttca atgtctggga gactgtttta tccccgagct agtatagtga
    18661 gggattagta aaactctcta ggttttccta gggaattttc tttgccttga tattgataaa
    18721 atggtattct aaaaagttag attaacttaa gtattctcat tttgaaaaga gatggagagt
    18781 gggatgatag agtggatatt ttttgatttg ggttcgacgc ttttagatga agaggctgct
    18841 tatggttatt atatagacaa gtgtgtgaag aagttagagt ctctggatat agaggtttca
    18901 tcagattctt ataaaaagaa aatggtggag tatgctcata agtcgctgga tcccattcgt
    18961 gcgacctggc actattttgc accgaccgag ccacgtcctt tatggacaaa tgagggtgtg
    19021 agcctgtatc ctgaaacaat agatgctcta gagaagttat cacaaaacta tcgattgggg
    19081 attattgcca atcagtctag tagtgttaga gatctgctta aagagtgggg aattgagtct
    19141 tattttcaac tcatcatcct ctctgaagag gttgggctat ctaaaccaga tacaactatt
    19201 ttcacacttg ccttgcaaaa aacaaatatc cctgcagata gagttgtcta tgtcggggat
    19261 agatatgata atgatattct gcctgctaaa tctttgggaa tgtggactgt acggatactg
    19321 actggttttg gaaagcatgc cagtgaaaat gaaaaattga agagcgattg ggtaattcct
    19381 tcattgcaag agataacaaa tatttttgaa taaacaaaaa aactagactg aacattctca
    19441 acctagtttt tacatgtatt agaacaagcc tttaacttta tccaaaagac cgttaacacc
    19501 ttcagaacct gataacaagc cttttgcttg ttccaagtat tcaccaaatt ggtccttgtt
    19561 ttcttcgata aattgttttg caccatcaaa gtctttgttt gcaatcaatt cttttacttg
    19621 gttaaaaaga tctactggat tcacgttgga atcacctcct atgagactat taaaccaaaa
    19681 ctggacggat ttcacaactg aaacgactta taaaaatgta acgcaaactg cttcaggaac
    19741 atagaaatcg tgtgaaagct cagtcaaaca gccattttcg gcatctcttt cgaatacagt
    19801 tgcattgtca gaatcttgat ggacaacaat caaatgcttt tcatcaggac taagcgtgaa
    19861 atcgcgagga gtttttccat ttgttgggac gatttcaact aattctaagc tggcatcagc
    19921 aagcgttttg tagactgcga tagagtcgtt tccgcggttg gagccataaa taaatttacc
    19981 atcctttgtg atgcgaatag cggcagtacc gttgaaacca gtatggtctt ctgggagagt
    20041 agagacagtt tgtaggtgtt caaattgtcc ccagccgtcg tagataagca cttcaatagt
    20101 tgaattgagt tcacagatga gataggcgat ttttgcgaca ggatggaaga caatgtgtct
    20161 tggaccactt cctggcgcag cctgataggt tgcgattttc tctacttttc cttggtcaga
    20221 taccttatag gttaccactt gatcacatcc taaatcacag gttactaaaa atttatcggg
    20281 cgtcaaatca gaaaagtgaa catgggcgga agcttggttt tcgtgcggcc cagatccttc
    20341 gtgttgagcg acatcagcta attctagcga accatccgcc aaacgtttat aaacaagtag
    20401 ttgccctttg tggaaattgg aaccataaac taaatctctt gtttcatcta cagcgacata
    20461 gcaaagtggt gcgccctctg atacaacatg gttgagtaga gtatagtcag cattaaaggc
    20521 agcgatacct cctagaccat tttcagcgcc gacggagtat agatgtccgg ccttatcaaa
    20581 ggcaaggtag gtagggttag gttcttcagt gaccaattct agattgctaa gttgtcctgt
    20641 ttcagagtca aaatttgctt tataaattcc tttggattca cgttttgtgt aggtaccgaa
    20701 atagatagcc ataggattct cctttttgga aatgattgat aaaattatac catgtttttc
    20761 tgagaaagtc gtataaattc tgtagttgat ttttacaaaa atcctttctc catgttacaa
    20821 tagaaaaaaa gactaggagt gtattagatg gaagataagc atcaaaaatt tagtctgact
    20881 tggtttttcc gcttgttttt aaatagccaa gcggtaacat ttttattagt aaccttgctg
    20941 acttttttga acatatttat ttttagtaaa attagttttt tattcagacc gataggaagc
    21001 tttttagaaa ttgtattgtt accgatgatt ttaacaggtc ttttgtatta cctattaaat
    21061 ccgatggttg actggatgga aaagcataaa atttctcgta cagttggtat ttccattctc
    21121 tttgttttaa tcagtcttct cattatctgg ggactggcgg tggcaattcc gagtattcaa
    21181 gagcaagtga catcctttgc gcaaaatctt ccttcgaata tccagaaaat cgaagggcaa
    21241 gtgactagct tattgcagga ccaaagattt gaacaatttc gtcctactgc attggaattg
    21301 ttaaataagg tcaatgatca agcagttgct tatgcgcaaa aattttcaac aagtgctgtg
    21361 aactgggcaa gtaatttgat ttcgacagca tctcaaatta ttgttgctgt tctgattatg
    21421 ccttttattc tcttttatct gttacgggat ggtcagtatt tgaataaaca catcacccaa
    21481 tatctaccaa ccaagtggag agaaccgatt ggaacagtac tatcagatgt gaatgggcaa
    21541 ttatcaaact atgttcgtgg tcaggtgacc gttgcgatta ttgttgccct gatgttctca
    21601 gtgatgttct caatcattgg tcttagctat ccaataactt tgggggtgat ggctggtttc
    21661 ctcaatctaa ttccgtattt gggttctttc ttggccatga ttccagctgt tattttagga
    21721 ttgattgctg gtccaatcat gctgataaag gttttagtag tctttatgat tgagcagact
    21781 atagaaggtc gttttgtgac accattgatt atcggaagct ccctaagtat tcatccgatt
    21841 accattttgt ttgtattatt gacagctggt cagatgtatg gtgtcctagg agttcttctt
    21901 ggaattccaa tatatgcctc tattaaggtt ttagtgaaag cggcatttga atggtacaag
    21961 gcacacagta gtttgtatga agatgaagaa aatgaggttg tgaatgaaca atagtgaaaa
    22021 aatgttggtt tgtttggacc aacaggattt agacaaggcg gataagtatt tcaagcgcgc
    22081 cttggtgcaa gatgatagcg aaacgctttt gtccttggca gcctacttag aaggcattgg
    22141 ttttttccca caggctagac aaatctatga acaggtcaaa gaagaatttc ccgaagtact
    22201 gatcaatctt gcccaaatag catttgaaga cggcatggtc gaagaagctt ttgcttattt
    22261 ggaggaaatt tcggaagaca gtcctgccta tgtagaaacc ttgttggtca aggcggacct
    22321 gtatcaggca gaaggcttgt cggatgtggc gcgtgaaaaa ttgttagaag caagtcactt
    22381 atcagatgaa cccatcatcc tctttggctt agcagaattg gatatggaac tggagctttt
    22441 taatgaggct atttcctact atgcccagct ggataatcgt gaaatctacg aattaacggg
    22501 agtttctacc tatcagcgaa ttggtattgc ctatgcaagt ttgggaaaat ttgaagcggc
    22561 cattgaattt ttggaaaagg ctgttgagtt ggaatacgat gatcagacgg tttttgagtt
    22621 agcagctctg ctatttgaac gagaagaata ccaaaaggcc aatctctatt tcaagcagtt
    22681 ggataccatc aatcctgatt ttgagggcta tgaatatgcc tatgctcagt cgcttcatgc
    22741 cgagcataag attgatgatg ccttggctat gactcaaaaa ggcctggcta aaaatgactt
    22801 tgatgccaat ctcttgctcc aggcttctca gtatgcctat gaattgcatg atgaggcggg
    22861 ggcagaagat tatcttctac gggcaaaaga ggtggcagat gatagtaacg aactagctct
    22921 gcgcttgtcc aatctgtatc ttgagcaaga gcgatttgaa gaggttgtgg ctttatttga
    22981 tgaagaggta gataacgttc tagctcgctg gaatatggcc aaagcctatc aagctctaga
    23041 aagagatgat gaagcgagtg agctttacga tgaattggct ggagaattgg ctgagaatcc
    23101 tgaatttttg gttgattacg tagcggtttt acgtcaactt ggtcgtttgg atgaggcaaa
    23161 agagcaagct cgtcgttata tccaattggt gccagacgat ttagccatgc aagaattttt
    23221 gaatgaagag taggttatgc aagtaaatcg attatttcaa tacaatacct taggtgcctt
    23281 aatggctgga ctgtatggcg gatccttgac ggttggcgaa ttgttggaac atggtgattt
    23341 gggtttggga accctggatt ccattgatgg cgagctgatt gtcttggatg gaaaggctta
    23401 tcaggccaag ggagcagggg agaaaccaga agtggttgaa gttccagctg atatgaaggt
    23461 tccctatgcg gcggtcattt tccatgaggc agaagtcatt ttcaaacaac gctttgaaat
    23521 gactagcgat gaattgcacc agcggattga atcctattat gatggagaaa atctcttccg
    23581 ttccatcaaa atcaaaggga cgttttcgca tatgcacgtg cgcatgattc caaaatcggc
    23641 ttctgatgtt cgatttgcgg aggtggcaag tcgccagcct gagtataccg ctgagaatat
    23701 ttcaggtacc attgttggta tttggacgcc agagattttc catggtgtca gtgtggctgg
    23761 ctatcatttg cattttattt cggatgattt gacatttggc gggcatgtca tggactatgt
    23821 tatctcagaa ggaatggtgg aagtgggacc agtagatcaa ctagaccaac gttttcctgt
    23881 tcaagaccgc cagtatcttt ttgctaagtt caacgctaag gaagttagag aagatattga
    23941 taaggcggag taattataag tagcaaaaaa atccatgaat tagattttca tggattttat
    24001 tttgtcttca gttggggtga cacggagggt cttctgacct cggtaggtca caaaaccagg
    24061 cttgccacct gttggtttgt gaagtttctt ggcctcaatc atatcgactt ggaccagatt
    24121 ggaatgtctg gccttagaga aataggcggc taactccgcc gcatcggtct tgacctcgtc
    24181 gcttgggtcc aagttatcag tgatgaccac gtgactgcct ggaatgtctt tggcatggaa
    24241 ccagagttcg cctttcttgg ccattttgaa ggtcagctca tcattttgca ggttattttt
    24301 cccaaccaga atgatggttt tcccgtccgt cgccaagtaa cgctcaggtt tctgacgctt
    24361 atggattttc tcacggtggc ggcgcttgag gtagcctgtt tcaatcaatt cctcacggat
    24421 ttcatcgatt tctgccagac tagcctgtcc cagcatggtg tcaacggact ccagatagac
    24481 aatggttgcc ttggtttcct caatcaagtt ggtcaggtgc ttgaccgcct ccttgagttt
    24541 ctggtatttc ttgaagtacc gctgggcatt ttggctagga gtcaaagcca catccaactc
    24601 aatctccagc tcctcgcccg tatagtagtt gtctaaccgc acgctcgcct ggtcattggg
    24661 tacctgatgc agataggtgg tcaagagctc gcccttttgc cgcaccaact ccgccgtctc
    24721 cgtatccgcc aattcttgct cctgcttgac caactttttg cgatttttct ccaactcgct
    24781 ggctacccgc ttgatcagct cattggcctg ctgggccacc cggtcccgct ccgccttgtc
    24841 ctgatagtag aagtccagca gactgctcag gctctcaaag tgtggctggt tttcagggct
    24901 attggcaaat ggcagagcag cataggattt gtctgttagg ctaggctgag ttgcctggtc
    24961 aaaaaaggca cggaagttct tgaggcggtc tgtctgcaaa tgactggcca gttcagaagc
    25021 cgtatccctc cccaaacctt gaaagacctg ttggagattt tttggactca gttcctgagt
    25081 cgataggatt tcaaacaatt tctcatcaga caccgtataa ggattgagag aatgtgtctc
    25141 cggtggacga atgtaggtgg aaccaggcaa aatcgtccgg taggaatttt gcgagaaacc
    25201 aacgtgcttg atagcctcga taatcttctg ttcagactta tctaccaaga tgatattgct
    25261 gtgcttgccc atgatttcca caatcaaggt agcttggata tgatcgccaa tctcgtcctt
    25321 gttggacacc gaaaattcta agatgcggtc attgtccaac tgacgaatct cctcgataat
    25381 agctccctgc aagtatttcc gcagaatcat ggtaaaggta ttgggcacct tgggattggt
    25441 aaaatccgac tgggtcagct gaacccgtcc gaaaaccgaa tgggcggaca ggagcaactt
    25501 atggctctga cggttgctgc ggatgttgag gacaatctcc tgttcaaagg gctgattgat
    25561 tttctgaatc cgcccgccct ctaggttggc tttcaattca gctgtcatgt gatgtaaaaa
    25621 aaatccgtca aaagacatgg tgttcctctt tctaatagct ataactcagt ctagtatatc
    25681 ataaatcagt gactttttaa cgaagaggac taaaagaagt attctta
//
LOCUS       DASFQS010000020        25117 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.020, whole genome shotgun sequence.
ACCESSION   DASFQS010000020 DASFQS010000000
VERSION     DASFQS010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 25117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25117
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.020"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(23..976)
                     /locus_tag="U1041_000748"
     CDS             complement(23..976)
                     /locus_tag="U1041_000748"
                     /inference="COORDINATES: protein motif:HMM:TIGR01784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HEM4767873.1"
                     /translation="MTKFRHSINPMIDIVAKKIFNDHEITIDFIETFLGFRPKSVQIL
                     NGTLADLKKEREGYFSTTVDVLARLDDGTQVIIEIQVVHQHSFIKRLWTYSCQHLVKD
                     LPNVRDKVKRTHDMYDKISPVYSIALVATQYFDDKHPIHSFVLTAEENGQVLEIPFGE
                     QGEMKKPFEMVIIELNKLSEGKLAKNQRLWMEFFANREFSQQQTDAISRAEHLLDRNT
                     WTEEERKMIDQLAYSAANHFGELETSFILGRKRGQEEGMAQGLQKGIQKGIQKGRAEG
                     MLDGQLKVARQMLVKNFTDEMIKELTGLSQEDLDGLKGEHK"
     gene            complement(1160..2023)
                     /locus_tag="U1041_000749"
     CDS             complement(1160..2023)
                     /locus_tag="U1041_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prealbumin-like fold domain-containing protein"
                     /protein_id="HEM4767874.1"
                     /translation="MRIIKQLVCCIIALVCSLSLPSLLVQAEDTYSIQVGISLPEHMD
                     AGKLDLSLEAWYLPEGDRETPEQLAEKLYALSRAELSQLYGQAQLSEKLTPQGVVGFS
                     GLKKGWYYIRQQGSATTIEVIPFVLQVDGRLQTIQAKVGLPGEKVGYRNFLKVSTSTA
                     PLAGAVFQVLEEVDGQLRQVMIDGKPYHLTSENGGHLKVGPLPYGSYYLQEIKAPKGY
                     LLSQDTIPFEISLDSHVSDVIRIKNKPVTPPGIEIPYTGNAVVIAVLSLGIILFLLGY
                     RLVTYKKGEKT"
     gene            complement(2048..3976)
                     /locus_tag="U1041_000750"
     CDS             complement(2048..3976)
                     /locus_tag="U1041_000750"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:NF027869.1,HMM:NF027884.1,
                     HMM:NF037639.1,HMM:TIGR04226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopeptide-forming domain-containing fimbrial
                     protein"
                     /protein_id="HEM4767875.1"
                     /translation="MKKITKLFSVFATLLTVFGTLVNLAPVVQAATGDTKVVVHKVVM
                     DETALDNFKYQEDFTKYNGTQIQDLQDYFKTDTAKEVENVRFKVWKKVEAGTTATNTK
                     TGTELGIADDTDNYQLAPTYPDGVLTTTNGAEFTLANGTYIFVEDKENSPYYNGQKEL
                     TGMKAVPFKLVLPQAKTDGTGYFNETDALHVYPKNTENEPTIDKTFGDNTKNQKDVNI
                     GDTIDYKITTKVPKDAAYKTFAWEDTMVAGLDFTTGSLKIASDQVTLDTADYELVQTV
                     RGFTLKLKDTGLTKLENAAKKGEVTFTLTYNATLNDSAEVDAEIPNKVKLIYGNRPSE
                     FTEPKSTNPSNGEIIVKKTWGEGTTSKDVVFNIYEEETGKFIKKVTLTAGAQSVTVDG
                     LEDTKKYIVIEESVDGTLPTYGNDTPNTIDVTNKKNPNPNPLTPEDPKVITYGKRFVK
                     TDDATTADAAKKLTGAGFVVKNAENKFLALKDTTTQAEAIKKYEDAEEAYVTAVKNNQ
                     TDNLDTLKAARDAAYEAMNMQWEWVDVQDKAFTFVSSADGKFEVKGLKAGNYKLVETK
                     APDGYALLTTEIPFEVGANSWTTATDTPVEGHQRVVNKKVTIPQTGGIGTIVFTVVGL
                     STMVFAFIAMKKRQAEEA"
     gene            complement(4019..14971)
                     /locus_tag="U1041_000751"
     CDS             complement(4019..14971)
                     /locus_tag="U1041_000751"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012956.1,HMM:NF037639.1,HMM:NF037690.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HEM4767876.1"
                     /translation="MKKVRYFFSSFLLLVLCLDIIRLPITIFSETVSATTPLTIRTKY
                     LEHLKEDGQKLAIKLDTSQKQLDRLDVIVQIEEGVDISKGLSLVVQNELELESQLDEQ
                     GVPKEKLPPGFVKDEDYREEDVPKEFPEQEVAPTVATQDSLESSLPVYGLGYYSIKIK
                     PEPERHIEWKVDEEKPERRYEEILLRLKIKKPLQTGQFMAVLSSDYKTILTEDWKTFE
                     ELVKRNSIEMVTDSVASDTEQPIPETSEPISDNTQSNPVPEGEEVIQEEQALAIQTAN
                     LRLVLREHEEGVLQPSKPIAGAEFIITSVENPEISYNGRTDEQGILDWKDLPLGEYQI
                     SQLSTAQGYEVEKQLTVIQLQESGAEKIIHVTNAKKNGLEGRIGSMLRSARTRRAVTE
                     TTTDRTTTIINNPNGTTTTITKEEEITKYIFDPIRLVIPGISTNFSQNGQLRKKEIRT
                     DSTGQATSIIWEYVTTISGADSQFIRSMQHHFSTTTDSGLGEPRILSLSKDNQNISQN
                     FFNIADERFKSTYSNLPIENGVYTYTIETPIIAPRDYYTLDYHSTTKVQPSQTSRLTQ
                     NGVTTEIAQGETKNITTTGTLSIPAEDWGGPLSKVSADTVNVSNAANVAGDYKSESVI
                     KWTQSNVNKGTTPENFDFSIDLDNSQSLHNVVVYIYEPTETGYRKLREQTYTRVSNGK
                     VTASNVPPGGIAVVETLTNITNNKTNHTFVGAELSALKKDLIIKKEWLENATPVDVNF
                     TVKGGNINETLTIRSSQREVVKRDVNKYEVTTSPTFKVGKKIFYDVNEVEPSGYSLVA
                     AEQDTEELIYTYKNKKNTSRPVPTNPGTCSHYGITSVNNTDIKYFRLSDGWQGFGSPL
                     QMQFRIPAYAEEGDYFEIKIPRELILKHVANPNKVWKEIQANGRHVANVYHVEQDKIR
                     FILTADAYSVADYTGSFFIGDEIRGATHINGRPVSGSEKYYDGVNPRIEYFFDPTNPL
                     GTKEVRKTLQFETKYHGGGMECSKTVTNQTTANYSDSEIMRLSGAVNKWMSYTDADEM
                     VWDVVYNAAGGDIWGNSGFYGNNRKFFEHLSETNQLYNGNNPSSFIKDIEVYLVDGTA
                     GGGYRYDTMQKLTPTAQLLGGGTQEYLLPGTNVKIHLTGSTQNWAPPNFIGANNRQFK
                     SNYKIEFYYEGSNIGRKAILAKIRTRKMIAPTENYFFNAVTANRYRWLNGGSTLEYYR
                     READTLAWGGAYPVDWYSLRLRKVGNENGQKRPLQGAVFTLSRDGKVVRRVTSDSDGI
                     LNIRDVYGGTYKLREVSAPVGYALDPTEKEIVIRNADNITIDGRPYDANTPPEIVNTK
                     YISLQIDKYTQGETRRLKGAVFRLRSKENNRYSVTLGENTSSATFLFTNLAKGTYVLE
                     ELTAPAGYKKISPIEIEVYEDAGVLKVRKLTDTNHIQSGHVFESNGTFRMNVVNEDIN
                     QEFTKVNTERQPLADAIFELRKMKQGGYDVIRRGIATNAAGKFRLNNLQPNSQYEVWE
                     TVAPEGYEKPTSAVAKFRVTADGQIEFTENSSTIINRRPDNKKFQFRVVKVDAVTNQP
                     ITSQSRIGITDANGSVIGGQVATFTSGGTYTFHNQNQNFDAGTYYIKEFAAPNGYNIL
                     PEPIPFTVNNDGTFDTTNPNLLISNQGGNQPITLEIRVKNYKKATLRFTKRIKGIEDV
                     QGAISGNVTFRLTKDNDSSFTAVEKTQSGNSDFVIENLAPGTYTLEEVTPPQGYVKEK
                     ATYKVDVSNDGSIKYYKQINQVSVIKSEHFNRYINNTTDANMIDGSDTSELIFDTNVN
                     GQSNIQAESYLGVDLGSTQRVTHIRVLQGRAGNHTDRMAKAILEYSEDGVSYTVIQNG
                     SNNHFTDRLIDLDVSINARYVRIRNAELVVNKWMAVQEFQVQADAQTILYNQAGPNGK
                     ILVGNIQNPSIAIVKVNPQDEVMTGANLTARFKLYKVANDTTYQNVSERIQDSGLVQE
                     FTWQSGSTTASLLSAKELGRYALVETQAPTGYRRLNNPILLDLFETGQSHDGNRNKAV
                     TRFRKVYDTESDLVIDTTNTVNDNTIKLKVKNYPDRYQLKLLKRALDGTTGLVARFEL
                     YDSQDRKVTEGRTDREGNSYLFRDLAPGTYRLRETESPRGYYLHNDIRVTIGERGEAS
                     IDSGSTELVSIAPANSQNTIELTVKNKPYTAFSIEKVSKLAPTTTLMNVKLEIKAKDG
                     VLSPIFSDDAWHREHYRAEIDTANRALRWWTSAKGNAVFSLPAGTYTVTELEAPAGYE
                     RMAPFDIIMTEDGQVVVPTNNAQVEVGEKDNRVHIKLTNVFKPKIKITKVDSREVNRK
                     LAGARFKLFGPDENTQIGQEVTTGTNGEITLPGVEPGTYYLQESQPPTDYQANSLKYQ
                     IIIDANGSAQITNADGKIEVGTSQNQGADKIIPITVKNERETYDLKILKRDAQNAQQG
                     LIATFGLYNADGISKITEGQTNPSDHSYTFSQLLPGTYVLKEVTPPSGYIQVDPVRLE
                     ITQAGQLRILSGDTELLQVGASSGNTLQLTVKNDSKKTLRISKRIKGLEDLPSLITGE
                     MTFTLTKDNDTTAVSAVQTHAATEDFVFTNLTYGSYTLVETTPPAGYMVEPITYKVSV
                     SRSGVSLYKVANAAPIERVTGATLFKSGDLSNIQSGQDGDAIDGSDTTSVTYQNFNGQ
                     GDNIPAGAYLGVDLQGVKRVRHIHYLQGTQHNPLDRFNRFTLEYSIDGHTYFPLSTYT
                     ESGLVDLNTDIVARYIRVRNEDRVDQKWYGVRELTVSAQATETVGALSTGQYPIGNIQ
                     HPQIQVEKRDMNNARINQSVTFKLYKVDDATTTANAAAAIQESNLVQTFTLTNGQASQ
                     ALQAKVLGRYALVEVAPPTGYRALAGPVLLDLTTAQETHSGSQMKTVSRFTLVDSTDK
                     VRIDTNTANVLKFIVKNEPLTYHLKILKRDVNNAATGLDARFELYNENESTKLEQGNT
                     TQTGNSLTFRNLRPGTYVLKEVTAPTGYNPIQKIKLTISLDGQITIVEGPQDLLEGQA
                     VNANNEIELVVKNRPFTDFSIEKVSNLDPTINLAGVQLQIKAKNNGPAPLFSDDNWHI
                     QHYQATIDTANKALTWWTQSNDVGNAVFKLPQGTYTISELAAPAGYELLQPFDIIVGA
                     DGQVRLADGAPTNAEINTKDNRLNLKLTNIFKPKLKIIKVDSRDENRRLANATFKLFG
                     GDGRTQVGSDLVTGTTGEVEIPALTPGTYYLQETQSPAGFQTNGTKYKLIIATDGTTT
                     VENADDLIAVTPLSDDKVISITLKNNVKTYRLKIKKRDYDNPTNGVSGARFALYPSEG
                     PNEDGSNKVQVLINGRMTALEGGSYSHLDNTIDFPNIPPGEYVLRETQAPSGYTKIRD
                     TRLQIGEDGRLTLLDADQALVSVETGQGDTLVMVAKNIRTFNFQIKKVDSTNEATLLD
                     NARFSIYKTDVNWTKGDTALAQGLTSAGIYQTNLEPGYYILKEDQAPSDYLLNRNEYR
                     FQINHDGSIYLHNPDATVSLAPADTNRLVVFTMKNTRTTSQFKLAKRSYRDSAQRLEA
                     TFELKESGNAQATAVVKTTTTTGDEVLFDNLPVGKSYILKETVAPDGYQKIEKEIHID
                     IGADGAITIRDGGDLVSLDNTDSHLIIVKNLRKGEYPKTGGIGIIPYIALGGVMMLLA
                     LAVELRRKKH"
     gene            complement(15343..15696)
                     /locus_tag="U1041_000752"
     CDS             complement(15343..15696)
                     /locus_tag="U1041_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HEM4767877.1"
                     /translation="MILFYEYPKCSTCRAAKAELKSLGLEFEAIDIKSTPPSAEELKA
                     WMEATGLELKKYFNTSGNSYRELGLKDKFESLTVDQALDLLANDGMLIKRPLLIQDGK
                     ILQIGYRTKYENLGL"
     gene            complement(15693..16187)
                     /locus_tag="U1041_000753"
     CDS             complement(15693..16187)
                     /locus_tag="U1041_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEM4767878.1"
                     /translation="MLYKQIYHSPLGPMSLVASDRGMRGAWFEGQKYFERGLTEEPVL
                     GSHPILDQTSLLLDAYFSGEEVDFTSLPLEAIGTEFQEKVWALLKEIPHGQTTSYGQL
                     AQQLDIRSGQAVGGAVGRNPYSIIVPCHRVLNQKGQLTGYAGGLDKKIWLLQHENPRF
                     EVKK"
     gene            complement(16190..17371)
                     /locus_tag="U1041_000754"
     CDS             complement(16190..17371)
                     /locus_tag="U1041_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEM4767879.1"
                     /translation="MVFSVRTFNNINQVGLKELGNRFQIDGDHAANPDAFIIRSENLH
                     GFDFPENLKAIARAGAGTNNIPIEEATEKGIVVFNTPGANANAVKEAVIASILLSARD
                     YIGATAWANTLSGDDVPKQVEAGKKQFAGTEISGKTLGVIGLGAIGARIANDARRLGM
                     NVLGYDPYVSIETAWSISSHVKRVDDLKEIFSNADYITVHVPLTDKTRDLFNADSFGQ
                     MKKGTTLINFARGELVNNADLFEAIEAGVIKNYITDFGTEEVLNKDNIIVFPHVGGST
                     EEAELNCAIAAGQTIRRFMETGEIINSVNFPNVKQFLDAPYRITLINKNIPNMVAKIT
                     TAVSELGINIDNIINKSKGDYAYTLLDLDEADKAKIDQLVANFEATDAIVKVRVIQNK
                     N"
     gene            complement(17424..17981)
                     /locus_tag="U1041_000755"
     CDS             complement(17424..17981)
                     /locus_tag="U1041_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767880.1"
                     /translation="MEIRLAHPNELEAIVNILEDARAFLATSGINQWQGEYPNKEDIF
                     DDILSGRGYVGLVDGKVAAYAAVHRGQEAEYEAIYEGKWQHNHPVYTTFHRIAAADEF
                     RGQGIIQTFLQGLIEGQKGPDFRCDTHEQNKTMQHILKKLGYVYCGKVPIDGERLAYQ
                     KIKHKSERSLYQEISEDDRWLLGNN"
     gene            complement(17981..19072)
                     /gene="serC"
                     /locus_tag="U1041_000756"
     CDS             complement(17981..19072)
                     /gene="serC"
                     /locus_tag="U1041_000756"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEM4767881.1"
                     /translation="MTIYNFSAGPAVLPKPVLERAQAEFLDYNGSGMSVLEMSHRSKD
                     FDDIIKGAEATLRELMAIPDNYKVLFLQGGASLEFTMIPLNFAQGKKAYYLVGGSWGK
                     KAYTEAVKLSKTIDFEPILLGSTEDITYAELPTFDKNDIDPNAAYVHLTTNNTIEGTA
                     VYDIPDTNGVPVIADMSSNILAARYNVEDFAMIYAGAQKNIGPAGVTVVIVREDFLND
                     QPMLSSMLDYRIQAENDSLYNTPPAYSIYISKLVFEWVKEIGGVDEMEKINREKSGLL
                     YDYIDQSNFYTNPVRKKEERSVANIPFVSPSEELDAKFVKEATAAGFKNIKGHRSVGG
                     MRASLYNAFPRQGVVELIEFMKKFATENA"
     gene            complement(19192..20055)
                     /gene="rsmI"
                     /locus_tag="U1041_000757"
     CDS             complement(19192..20055)
                     /gene="rsmI"
                     /locus_tag="U1041_000757"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEM4767882.1"
                     /translation="MKVQKSFKGQTSFGTLYLVPTPIGNLQDMTFRAVQILKEVDIIA
                     AEDTRNTGLLLKHFEVETKQISFHEHNAHEKIPVLIDWLKSGQSIAQVSDAGLPSISD
                     PGHDLVGAAIAEDIPVVALPGASAGITALIASGLAPQPHIFYGFLPRKSGQQKEFFQE
                     KKTYPETQIFYESPYRVADTLENMLTVYGDRQVTVVRELTKLYEEYQRGSISELLEYL
                     EENPLKGECLIIVEGAGEEVYPSADEVDLKAEVEREIASGIKPNQAIKEVAKRYQLKK
                     QEVYDIYHGLG"
     gene            complement(20057..20374)
                     /gene="yabA"
                     /locus_tag="U1041_000758"
     CDS             complement(20057..20374)
                     /gene="yabA"
                     /locus_tag="U1041_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HEM4767883.1"
                     /translation="MDKKEIFDALDDFSQNLLTTLAEVDAIKKHLQGVIDENTTLRLE
                     NSKLRERLEKDDKTGHKSSNFGKENLENIYEDGFHICTFSYGQRRDNDEPCMFCVELL
                     NRD"
     gene            complement(20394..21278)
                     /locus_tag="U1041_000759"
     CDS             complement(20394..21278)
                     /locus_tag="U1041_000759"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEM4767884.1"
                     /translation="MKIEELRNLQPNVFQRFVTILEQRRLAHAYLFSGDFASFDMAIF
                     LSQSLFCQEKEGALPCQKCRSCRLIEANEFSDLTVIAPQGNVIKTDTIRELVKNFSQS
                     GFESNKQVFIIRDAEKMHANAANSLLKVIEEPQSAIHIFLLTNQEEAVLPTIKSRTQI
                     IGFPKNIPAMERMLEEEGLLKTQANLLAQLVSSQEEAKKLAENKNFLDLMGQTKKFTD
                     LLLVEPTRAYLQVGILVSLAVEKAEQGRLFDLLSLILSEKMMESANVREKMDAVLKAK
                     KMWQANVSLQNSLEYITL"
     gene            complement(21275..21913)
                     /locus_tag="U1041_000760"
     CDS             complement(21275..21913)
                     /locus_tag="U1041_000760"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004193056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEM4767885.1"
                     /translation="MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGV
                     AIAEEIRNIILNPANTAMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSS
                     IAYQGFGRGLDIDDIHWLNQFATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDM
                     EKADMHRRVRQGYLSILEQEPERFVKIDASQPLEAVVADALAVIKKRFAERT"
     gene            22088..22954
                     /locus_tag="U1041_000761"
     CDS             22088..22954
                     /locus_tag="U1041_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM4767886.1"
                     /translation="MVRLKNILLILLGAGLFAFGLNYLIMPNRLFEGGATGLTLIIYY
                     LFHIQPWIMNIVINIPLFILGWKILGKKTLYLSILGTFSVTFWLAIFEKIHFSINLQQ
                     DLILVSILGGILMGLGLGTIFRAGGTTGGSDIIARIGHKFLPYSIGQIILAVDILILT
                     LIVIVFKDLRTVLYTLMMLTIASRMIDFVTEGGYGSKGVMIVSQKSDQLAQAIDCEIE
                     RGVTFIKAQGFYSKADVNMIYSVIYKSQLQEMKELIHRIDPHAFITITDAHEVLGEGF
                     TLDRDKKPIERH"
     gene            complement(22991..24262)
                     /locus_tag="U1041_000762"
     CDS             complement(22991..24262)
                     /locus_tag="U1041_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HEM4767887.1"
                     /translation="MSGFNFDIDQIANNSLSTKDKTTELIQATPTGDNSKVSFLAQLT
                     PEQQTGIRAKAPQLVDNFLANQNALLDFGKEAVEEVNATVNHILSEQKKIEIPQVDEL
                     LANTNRELNGFVAKYKDISTTAELEKKPGFFQRLFKQTKNDLQEFYFDSQTIEKKMDS
                     MAASVVKQEEVLSRNIVSAELLIENNTKSIENLVGVIAFIEATGQEAAQRAKAEQERL
                     AGLQPTTVDYQVASEKLARVTEVANILEQQHSEYMSRLYVAWTTTPQMRNLVKVSSDM
                     RQRLGMLRRNTIPTMKLSIAQLGILQQSIKSSQTADAIVNANNAALQMLADTSKEAIP
                     MMERTAQNPTLSVASVTKLAESLVAQNNGIIAAIDEGRQKRRELEAAIVRSAETINDS
                     VKLRDQKIIAALLEQGKEAQSEAEQALETNQ"
     gene            complement(24268..25095)
                     /locus_tag="U1041_000763"
     CDS             complement(24268..25095)
                     /locus_tag="U1041_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767888.1"
                     /translation="MGYKYKKYKKYGKNNSGLVALLVLLAIGFVMSFWYILLPIGLLI
                     GYFYKREAIQRFLNGDSIKRLQVLALSIRSGYEKHQELLVEKGEDKVVLQLRNRLLGQ
                     LFELDLLYQKVGKYLNGYESKEVVDTLQLKYHLKLPEAKTEKNTDTQVSTGGNAVMDE
                     QGMIADLALEILETYCNIQRDNLVILEKLEKATDKREELTAIHEANMNRFNDILQGYL
                     KIKKSPKDYFNAEERLVQAKSAMEMFDKDLDDTIKQFNEADMKDFEVSLRMMKREEE"
BASE COUNT         6600 a         5605 c         4795 g         8117 t
ORIGIN      
        1 gcactatagg ctagttgatc aatcatttat gttcaccttt caaaccatcc aaatcttcct
       61 ggcttagtcc tgtcagttcc tttatcatct catccgtgaa attcttcacc aacatctgac
      121 gagcaacctt gagctgacca tccagcatac cttctgctcg acctttttga atgccttttt
      181 gaataccttt ttgaagtcct tgagccatac cctcttcctg accacgcttt cttcctagta
      241 tgaacgatgt ttccaattca ccaaaatgat tggcggcact ataggctagt tgatcaatca
      301 tcttcctttc ctcctctgtc catgtatttc tatccagcag gtgttcggcc ctgctgatag
      361 cgtctgtttg ttgctggcta aattcacgat tggcaaaaaa ttccatccac aagcgttggt
      421 tcttagccaa tttcccctca ctcagcttgt tcaattcaat aataaccatt tcaaatggtt
      481 tcttcatctc cccttgctct ccaaacggaa tttccaaaac ctgtccattt tcctcagctg
      541 tcaagacaaa ggaatgaatg gggtgcttgt cgtcgaaata ctgggtggcg accaaggcaa
      601 tggaataaac tggtgaaatc ttgtcgtaca tgtcatgggt tcgtttgacc ttgtcccgaa
      661 cattgggcaa atccttgacc aagtgctgac aagagtaagt ccagagacgt ttgataaagc
      721 tgtgttggtg aaccacctga atttcaatga taacctgagt tccgtcgtcc aatctcgcta
      781 aaacatccac cgtggtgcta aaataaccct cccgttcttt cttcaaatca gcaagggtgc
      841 catttaaaat ctggacggac ttgggacgaa agcccagaaa ggtctcaatg aaatcaatgg
      901 taatctcgtg gtcattaaat atcttttttg ccacgatatc aatcatggga ttgatgctat
      961 gtcgaaattt tgtcaattgt gttcctccga taaatagaat ttaagaataa tctctatcta
     1021 ttaattcgaa gttcctagta atattatagc acttgagaga atttttttcc agaaacactt
     1081 aatgttttca agaaaaaata cacctgctga cacttgattc cagcaggtgt attctgtcaa
     1141 caatatgacc aaaggtagac taagtctttt cccctttctt gtatgtgacc aagcggtagc
     1201 ctagcaagaa gagaataatg cctagcgata aaaccgctat gaccaccgca tttccggtat
     1261 atgggatttc aataccggga ggtgtgacgg gtttgttctt tatgcggatg acatccgaaa
     1321 catgcgaatc cagactaatc tcaaagggaa tggtatcctg actgagaaga tagcccttgg
     1381 gagccttgat ttcctggaga tagtaactac cataggggag cggtcctact ttgaggtgac
     1441 ctccattttc cgaggtcaga tgatagggtt tgccgtcaat catcacttgc ctcagttgac
     1501 cgtccacctc ttccaagact tggaaaaccg ctcctgccaa gggggcagta cttgtagaaa
     1561 ccttgagaaa attcctataa cccacttttt cccccggtag tccaacctta gcctgtatgg
     1621 tctgtaggcg tccgtctacc tggaggacaa agggaatgac ctcaatggta gttgctgacc
     1681 cctgctgtcg aatgtagtac cagccctttt tcaagcctga aaatcctaca actccttgag
     1741 gtgtcagctt ttcagaaagc tgggcttgtc catacagctg acttagctcc gctcgactca
     1801 gggcatagag tttctctgcc agttgctcgg gagtctctcg atccccctcc ggcagatacc
     1861 aggcttcaag actcaaatct agcttgcccg catccatatg ctctggcaag gaaatgccga
     1921 cctgaataga ataggtatcc tctgcttgaa ccaaaagaga gggcagagac aacgaacaga
     1981 ccagtgcaat tatgcaacag actagctgtt taataatcct catcagaccc tccttttcta
     2041 ctctatccta ggcttcttct gcctgacgtt ttttcatagc gatgaatgca aataccattg
     2101 tactcaaacc tacaactgta aatacgattg taccaatacc accggtttgt ggaatggtta
     2161 ctttcttgtt gacaacgcgt tgatgacctt caactggtgt atcagtagct gttgtccagc
     2221 tattagcacc aacttcaaac ggaatctctg tagtcaataa tgcatatcca tctggtgcct
     2281 tggtttcgac aagcttgtag ttaccagctt tcaaaccttt gacttcaaac ttaccatctg
     2341 ctgatgatac gaatgtgaag gctttatctt gaacgtcaac ccattcccac tgcatattca
     2401 tggcttcata tgcagcgtca cgagcagctt tcaaggtgtc aaggttgtct gtttgattat
     2461 tttttacagc tgttacatat gcttcttctg catcttcata tttcttgatt gcttctgctt
     2521 gtgttgttgt atctttcaag gcaaggaact tgttctcagc attttttact acgaatcctg
     2581 cgccagttag ttttttagca gcatctgcag tggttgcgtc atctgttttc acaaaacgtt
     2641 taccatacgt gatcactttt ggatcttctg gtgtcagtgg attcgggtta gggttctttt
     2701 tgttggttac atcgatagta ttaggtgtat cgttaccata agtaggaagt gtgccatcga
     2761 cggattcctc gataacgatg tattttttag tatcttcaag accatctact gtaaccgatt
     2821 gagctcctgc tgtaagggta actttcttaa taaacttacc agtttcttcc tcatagatat
     2881 taaatacaac atcttttgag gttgtacctt caccccatgt ttttttaaca ataatttcac
     2941 cgtttgaagg gtttgttgat tttggctcag tgaactcact tggacggtta ccgtaaatca
     3001 atttaacctt gttagggatt tcagcatcaa cttctgcaga gtcgttcaag gtagcattgt
     3061 aggttaacgt aaaggttact tcaccttttt tcgcagcgtt ttctaatttt gtaagaccag
     3121 tatctttcaa tttaagagta aagccacgca ctgtttggac tagttcgtaa tcagccgtgt
     3181 ccaaagtaac ttggtctgaa gcaatcttca atgaacctgt ggtgaaatca agaccagcta
     3241 ccatggtatc ttcccaagca aatgtcttgt aggccgcatc cttaggaact tttgtagtga
     3301 tcttatagtc gattgtatcg ccgatgttta catctttttg attttttgta ttgtctccaa
     3361 atgtcttgtc aatagttggt tcattttccg tgttttttgg atacacgtgc aaggcatctg
     3421 tttcattgaa gtaacctgta ccatctgttt tagcttgtgg caagactaat ttgaatggaa
     3481 cagctttcat accagtcaat tctttttgac cattgtagta tggtgagttt tctttgtcct
     3541 caacaaagat gtaagtacca ttcgctaggg taaattctgc accattagtt gtggtaagga
     3601 ctccatctgg ataggttgga gcaagttgat aattatcagt atcatctgct atgccaagtt
     3661 cagtacctgt tttagtatta gtggcagttg ttcctgcttc tacttttttc cagactttga
     3721 atcttacatt ctcaacttcc ttggcagtgt ctgttttaaa gtaatcttgt aagtcctgaa
     3781 tctgagtccc gttgtactta gtaaaatctt cttgatattt aaaattatca agtgctgttt
     3841 cgtccattac gactttatga acgacaactt ttgtatctcc agtagccgct tgcactactg
     3901 gagcaagatt taccagcgtg ccaaacactg tcaatagcgt ggcaaacact gaaaataatt
     3961 tcgttatttt tttcatgaat gttctcctat ttttaatctt ttgtgcatta ggtattattt
     4021 aatgtttttt tcgacgtagc tcgacggcaa gagccagtaa catcatcacc ccccctaatg
     4081 caatataagg aataattcct ataccacccg ttttcggata ttctcctttg cggaggtttt
     4141 tcacgataat caggtgacta tccgtattgt ctagactgac gaggtcacca ccatctcgga
     4201 tagtgatggc tccatctgcg cctatatcaa tatggatttc tttttcaatc ttttgatagc
     4261 cgtctggtgc taccgtctct ttcaaaatat acgatttccc tactggcaaa ttgtcaaaga
     4321 gaacttcatc tcctgttgtc gttgttgtct taacaactgc tgtcgcttga gcattcccac
     4381 tttctttcaa ttcaaatgtc gcttctagac gctgagctga atcacgatac gagcgttttg
     4441 ccaacttgaa ctgagaggtt gttcgggtat ttttcatagt aaagacgaca agacgattcg
     4501 tgtctgcagg agccaacgag acggtggcat ctggattatg aagatagata gaaccatcgt
     4561 ggttaatctg gaagcggtat tcattccgat tgaggagata atcggatgga gcctgatctt
     4621 cttttaggat ataatagcca ggctcaagat tagtctggta gatacccgca cttgtcagac
     4681 cctgagctaa ggctgtgtct ccttttgtcc agttaacatc tgtcttgtag atagagaagc
     4741 gagcattatc gaggagggtc gcctcatttg tactatccac ttttttgatt tggaagttaa
     4801 aagtacgaat gtttttagca accatgacaa gcgtatcccc ctgccctgtc tcaacggata
     4861 caagagcctg atctgcatca aggagcgtca agcgtccgtc ctccccaatc tgaaggcgcg
     4921 tatctctgat ttttgtgtaa cctgatggag cttgtgtctc tctaaggacg tattctccag
     4981 gtgggatatt tggaaaatca attgtgttat ccaagtgaga gtagctacca ccctcaaggg
     5041 ctgtcatacg accgttaatc agtacttgca ccttattact tccatcttcg tttggtccct
     5101 cagatgggta gagagcaaat cgagcaccag atactccgtt agttggatta tcatagtcgc
     5161 gcttcttaat cttcaagcga taggtcttca cattgttctt cagtgtgatt gaaatgactt
     5221 tatcatcaga aagtggcgtg acagcaataa ggtcgtcggc attttctact gttgtagtcc
     5281 catccgtagc gataattagt ttgtacttgg ttccatttgt ctggaagcct gctggggact
     5341 gggtttcttg tagatagtag gtacccggtg tcaaggctgg aatctctact tccccagtcg
     5401 ttcctgtcac caagtcactt ccaacctgcg tgcgtccatc cccaccaaag agtttgaagg
     5461 ttgcatttgc aagtctgcgg ttctcatccc tgctatcaac cttgataatc ttcagtttcg
     5521 gtttgaagat gttggtcaat ttgaggttga gcctgttatc tttggtatta atctccgcat
     5581 tggtcggtgc gccgtctgct aaccgaactt gaccatctgc tccaacgata atatcaaacg
     5641 gttgaagcaa ttcgtaacca gctggtgcag ctaactcact aatcgtatac gttccctgag
     5701 gaagtttaaa gacagcgttg ccaacgtcat tggattgggt ccaccacgtc aaggctttat
     5761 ttgcggtatc aatcgttgct tgataatgtt ggatatgcca attatcatcg ctaaatagcg
     5821 gtgctggtcc attatttttt gccttgattt gcagctgaac tcctgccaaa ttaatcgtcg
     5881 gatctagatt gctaaccttt tcgatactga aatctgtaaa cggtctgttc ttgacgacaa
     5941 gttctatctc gttattggca ttcacagctt gaccttccaa caagtcttgt ggtccttcca
     6001 caatcgtaat ttgtccatct agactgatgg tcaatttgat tttctggatc ggattgtagc
     6061 ctgttggggc tgtgacctct ttgaggacgt aagtgccagg tcgcaaattg cggaaagtaa
     6121 ggctgttacc tgtctgcgtg gtattgcctt gctctaactt agtagactca ttctcattgt
     6181 agagttcaaa acgggcatca agtcctgtcg ccgcattatt gacatcgcgt ttgagtatct
     6241 tgagatgata ggtcagaggt tcatttttta cgatgaactt cagcacattg gctgtgttgg
     6301 tatcaatcct aaccttgtct gttgaatcaa cgagagtaaa gcgactcact gtcttcatct
     6361 gacttccgct gtgtgtctcc tgtgcggttg tcaagtctag taagactgga ccagctaaag
     6421 cacgataacc agttggcggt gcgacttcga caagggcata gcgtcccagt accttggctt
     6481 gtaaagcctg acttgcttga ccatttgtca atgtaaaggt ttggacgaga ttgctttctt
     6541 gaatggctgc agcagcgttc gcagttgtcg tcgcatcatc caccttatag agtttgaagg
     6601 tcacagactg gttaatccga gcgttattca tatctcgttt ttccacttga atctgtggat
     6661 gctggatatt gccaattgga tattgaccag ttgataatgc gccaacggtt tctgtagctt
     6721 gagctgaaac ggtcaattca cgaaccccat accatttctg atctactcgg tcttcatttc
     6781 tcacacgaat gtagcgagcc actatgtccg tgttcaaatc gaccaatcca gactctgtat
     6841 aagtagacag tgggaaatag gtgtgtccat ctattgagta ctcaagtgtg aagcggttga
     6901 atctatctag cggattgtgc tgagtgcctt gcaagtagtg aatgtggcga acacgtttca
     6961 cgccttgtag gtcaacccct agataggctc cagcaggaat attatctcct tgaccattga
     7021 aattctggta ggtcacagaa gttgtatcac ttccatcaat tgcgtctcca tcttgtcctg
     7081 actggatatt cgataggtcg cctgacttga agagggttgc acctgtgaca cgttcgatcg
     7141 gagctgcgtt cgctacttta tagagagaaa ctcctgagcg actcacggat accttatagg
     7201 taatcggctc gaccatatag cctgctggtg gtgttgtttc gactagggta taagaaccgt
     7261 aggtcaggtt agtaaacacg aagtcttctg tcgcagcatg tgtctgaacg gctgatactg
     7321 cggttgtatc attgtccttg gtcaatgtaa aggtcatctc acctgtaata agactcggca
     7381 agtcttccaa tcccttgatg cgtttggaaa tgcgcagggt tttcttactg tcgtttttca
     7441 ccgtcagttg aagcgtattg ccacttgatg caccaacttg tagaagctcc gtatctcctg
     7501 acaggattcg taattgacct gcctgcgtga tttcaagtcg aactggatct acttgaatat
     7561 aacctgacgg cggtgttact tctttgagga cataagtgcc agggagcaac tgactaaagg
     7621 tataggaatg atcgcttggg ttggtctgac cttccgtaat cttacttatc ccatctgcat
     7681 tatacagtcc aaatgtcgct atcaatcctt gttgagcatt ctgggcatcc cgtttcaaaa
     7741 tcttgaggtc ataggtttct ctctcatttt taacggtgat tgggataatc ttatccgcac
     7801 cctgattttg gctagttcca acttcaatct taccatcagc attagtaatc tgagccgaac
     7861 cattggcatc aattatgatt tggtatttca gactattagc ctgataatct gtcggaggct
     7921 gactttcttg caaatagtag gtacctggtt ccacgcctgg aagcgtgatt tcaccgttgg
     7981 tgcctgtcgt cacttcctga cctatctgcg tgttttcatc cggtccaaat agcttgaagc
     8041 gagcacctgc tagcttacgg ttgacctcac ggctgtcgac tttggtaatc tttatcttag
     8101 gcttaaagac gttggtgagt ttgatatgaa cacgattgtc tttttctccc acctcaactt
     8161 gtgcattgtt tgtcggaact accacctgtc catcttccgt catgataatg tcgaacggtg
     8221 ccattcgttc atagcctgct ggtgcttcca attccgttac cgtataggta cctgctggca
     8281 gactaaagac cgcatttcct tttgcacttg tccaccaacg aagagcacga ttagccgtat
     8341 caatctcagc ccgatagtgt tccctatgcc atgcatcatc actaaagata ggtgaaagta
     8401 ctccatcttt ggctttgatt tccaatttga cattcatcaa agtagtggtt ggagcaagtt
     8461 tgctgacttt ttcgatacta aatgccgtat aaggtttatt ttttacagtt agctcaatgg
     8521 tattctggct attggcagga gcaatgctca ctaattctgt actgcccgaa tcaatgcttg
     8581 cctctcccct ctcaccaatc gttacccgaa tatcattgtg taaatagtaa cctcttgggg
     8641 attcagtttc ccgcaaacga taggttcctg gtgcgaggtc cctaaacaga tagctattac
     8701 cttctcggtc tgtccgtccc tcagtgacct tccgatcttg gctatcatac agctcgaaac
     8761 gagctaccag accagtagta ccgtcaaggg cacgttttag aagtttgagt tgataccggt
     8821 caggatagtt tttcaccttc aatttgatgg tattatcgtt aactgtattg gtcgtatcaa
     8881 tgacgaggtc tgactctgta tcgtagacct ttctaaatcg tgtcacggct ttattcctat
     8941 ttccgtcatg agactgacca gtttcaaaca agtccaagag tatcggattg tttaaccgtc
     9001 tgtaacctgt tggtgcctgc gtttcaacca aggcataccg tccaagttcc ttggcagaca
     9061 gtaaacttgc agtcgtagaa ccactctgcc atgtgaactc ttgaaccaat ccactgtctt
     9121 gaatccgttc tgaaacattc tgataggtcg tgtcgttagc aactttatag agcttgaaac
     9181 gagcagtcag gtttgcacct gtcatgactt catcctgtgg attgactttg acaatggcaa
     9241 tagatggatt ttgtatgttg ccgaccaaga ttttcccatt tggtccagct tggttatata
     9301 gaatggtttg ggcatcagct tgaacttgga actcttgcac tgccatccat ttattaacaa
     9361 caagctctgc atttcgaata cgaacgtagc gagcattgat ggacacatcc aaatcaatca
     9421 gacgatcagt gaaatgattg ttgctaccat tttgaatgac agtatagctc acaccgtctt
     9481 ccgaatattc caaaatagcc ttggccatgc gatcggtatg atttcctgcc cgtccttgca
     9541 agacacgaat atgggtcaca cgctgggtac tgcctaaatc aacgcccaaa taactttcgg
     9601 cttggatgtt gctctgacca ttgacattgg tatcaaagat gagttcactc gtatcacttc
     9661 catcaatcat attggcatcc gtagtgttgt taatatagcg gttaaaatgc tcagatttta
     9721 tgacggatac ctgattaatc tgtttataat atttaatcga gccatcgttg ctgacgtcca
     9781 ccttataggt agctttttcc tttacatagc cttgcggcgg agttacttct tctaaggtat
     9841 aagtacctgg agcaagattt tcaatgacga agtcgctatt gccgctctgt gttttttcca
     9901 cagcagtaaa gctactatca ttgtctttgg tcaagcggaa ggtgacattg cctgagatag
     9961 caccttgaac atcctcaatc cccttgatac gtttggtgaa gcgtaaggta gctttcttat
    10021 agtttttcac tcgaatttcc agtgtaattg gctgattacc accttgatta ctgatgagca
    10081 aattcgggtt tgttgtatcg aaagttccat cgttgttgac ggtaaatgga atcggttctg
    10141 gcagaatatt gtaaccattt ggtgccgcaa attccttgat atagtaggtt ccagcatcga
    10201 aattctggtt ttggttatgg aaggtatagg ttcctccgct tgtaaaagtg gctacttgcc
    10261 caccaataac tgagccattt gcgtcagtaa taccgatacg tgactggctt gtgattggct
    10321 gattggttac agcatcgacc ttcaccactc taaattgaaa cttcttatta tctggtcgtc
    10381 tattgatgat agtagaacta ttttcggtaa attcaatctg accatctgct gttactcgga
    10441 atttggcaac agcacttgtc ggtttttcgt aaccttcagg tgccacagtc tcccaaactt
    10501 catactggct atttggttgt agattattca atcgaaactt accagcagca ttagtggcga
    10561 tacctctccg aatgacgtca tagccaccct gtttcatctt cctcaattca aagattgcat
    10621 ctgcaagtgg ttgtcgttcg gtattgacct tggtaaattc ctggttgatg tcttcgttga
    10681 caacattcat gcggaaagta ccattacttt caaatacatg tcctgactgg atatgattgg
    10741 tatctgtcaa tttacgaact ttcaaaacac ccgcatcttc atatacttca atttcgatag
    10801 gggaaatctt tttataacct gccggagctg tcaattcttc taagacatag gtaccctttg
    10861 caagatttgt aaagaggaag gtagcggaag atgtattttc ccctaaagtc acactgtagc
    10921 gattattctc cttactacgt aaacggaaga cagctccttt cagccggcgc gtttccccct
    10981 gagtgtattt atcaatctgc aaagaaatgt atttggtatt gacaatttct ggtggtgtat
    11041 tagcatcata aggacgtcca tcaattgtta tattgtcagc gttccttata acgatttctt
    11101 tctcagtcgg atccaaggca tagcccacag gtgctgacac ctctcttagt ttataagtcc
    11161 ctccatacac atctcgaata tttagaatac catcgctatc cgatgtcacc cgtcgaacaa
    11221 ccttcccatc acgactaagt gtaaatactg caccttgtag aggacgtttc tgtccatttt
    11281 cattccccac tttgcgtaat ctcagagaat accagtccac tggataggca ccaccccaag
    11341 ccagcgtatc tgcttcacga cggtagtatt ctagagtaga accaccattt aaccatctat
    11401 agcgattggc agtcacagca ttaaagaaat agttctctgt aggtgcaatc atcttgcgtg
    11461 tgcgtatttt tgcaagaatt gctttccttc caatgttact cccctcataa taaaactcta
    11521 tcttataatt actcttaaat tggcgattgt tagcacctat gaaatttggc ggagcccagt
    11581 tctgagtact tcctgttaag tggattttca cattcgttcc aggtagtaag tattcttgag
    11641 tccctccacc caaaagttgt gcagtcggtg tcaacttttg catagtatcg taacgataac
    11701 cacctcctgc agttccatct accaagtaaa cttcaatatc tttaataaag ctactcggat
    11761 tatttccgtt gtataattgg ttggtttcag acaggtgttc aaaaaactta cgattatttc
    11821 cataaaaacc actgtttccc cagatatcgc caccggcagc attatagaca acatcccaaa
    11881 ccatctcatc tgcatcagtg taagacatcc atttgttcac cgctccagac aatctcatta
    11941 tttcactatc actataattg gcagttgttt ggttggtcac tgtcttgcta cattccatac
    12001 cgccaccgtg atatttggtt tcaaattgta aggtttttcg cacttcttta gtacccaacg
    12061 gattagtcgg gtcaaagaag tattcgatac gagggtttac accgtcgtaa tacttttcac
    12121 tccctgatac tgggcgacca ttaatatgag ttgcaccacg aatttcatct ccgataaaga
    12181 aactacctgt ataatcagct acggaataag catctgctgt taatataaat cgaattttat
    12241 cctgctcgac atggtagaca tttgcaacat gccgtccatt agcttgaatt tccttccaaa
    12301 ccttgttagg attggctaca tgttttaaaa ttagctcacg aggaattttg atttcgaaat
    12361 aatccccttc ttctgcatag gcaggaatcc tgaattgcat ctgcaaagga gagccaaatc
    12421 cctgccaacc gtcactcaaa cggaagtact tgatgtcagt attatttacc gaagtgatac
    12481 catagtgcga acaggtacca ggattggtcg gaacaggtcg actggtattc tttttgttct
    12541 tgtaggtgta aattagctcc tcggtgtcct gctctgcagc tactaggcta taacctgacg
    12601 gttctacttc atttacatca taaaatattt ttttaccaac tttaaaagtt ggagatgtag
    12661 ttacttcata tttattgaca tctcttttta caacttctct ttgactactt ctaatagtta
    12721 acgtttcatt tatatttcca ccttttactg taaaattaac atcaactggc gttgcatttt
    12781 caagccattc tttttttata atcaaatctt tttttagtgc agaaagttct gcacctacaa
    12841 aagtatgatt tgtcttattg ttagtaatat tagttaacgt ttctactaca gctattcctc
    12901 ctggaggaac attactagct gtaactttac cattagaaac acgtgtatat gtttgttcac
    12961 gtagttttct atagccggtt tctgttggtt cataaatata aactacaaca ttgtgcaagc
    13021 tttgagaatt atcaaggtct atgctaaaat caaagttttc tggcgtagtt cctttattaa
    13081 cattagattg tgtccatttt ataacacttt ctgacttata atcacctgct acatttgctg
    13141 cattagatac attaacagta tctgcactta ccttactaag tggtccaccc caatcttctg
    13201 ccggtatact caacgtgccg gtagtagtaa tattttttgt ttctccttgc gctatttctg
    13261 ttgtaactcc attttgagtc aatctactcg tttgtgaagg ttgaactttt gttgtagagt
    13321 gataatctaa agtatagtaa tctctaggtg ctataatagg tgtttctatc gtatatgtat
    13381 atacaccatt ttctatcggt aaatttgaat aggtagattt aaatctctca tctgctatat
    13441 taaaaaaatt ttgagaaata ttttgattat cttttgataa tgataatatt ctaggctccc
    13501 ctaatccaga atctgtcgtt gtagaaaaat gatgttgcat acttctaata aattgtgaat
    13561 cagctccact gatagtagta acatattccc atataatcga agttgcttgt cctgtactgt
    13621 ctgttcttat ttcttttttt ctaagttgcc cattttgact aaaattcgta gaaattcctg
    13681 gaataaccaa tcgaatcgga tcaaaaatat acttggtgat ttcctcttct ttcgtaatag
    13741 tagtggttgt tccatttgga ttattgatga tggtagttgt tctgtcagta gtcgtttctg
    13801 taacagctct cctagtccga gcagagcgca acatactacc aatccgtcct tccaacccat
    13861 tctttttagc attggtgaca tggattattt tttcggctcc actttcttgc aactgaatga
    13921 ctgtcagctg tttctctact tcgtaacctt gagctgttga caattgactg atttggtact
    13981 cacccaaagg taagtctttc cagtctaaaa tcccctgctc atcagtgcgg ccgttataac
    14041 ttatttctgg attttctacc gatgtaatga taaactccgc acctgcgatg ggcttgctag
    14101 gttgcaagac accttcttca tgttctcgta ataccaagcg tagattagct gtttgaatgg
    14161 ctaaagcttg ttcttcttgt atcacctctt cgccttcagg tactggatta gactgcgtgt
    14221 tgtcagaaat aggttcagaa gtttctggaa ttggctgctc ggtatcggag gctacggaat
    14281 cagtcaccat ctctatacta ttccttttga ccaattcttc aaatgttttc cagtcttctg
    14341 ttaagatggt cttataatct gatgacagaa cggccataaa ttgaccagtt tgtagcggct
    14401 tctttatctt caagcgtagc agaatttcct cgtatctccg ctcaggcttc tcttcatcta
    14461 ccttccactc tatatggcgt tcaggctctg gcttgatttt gatggagtaa tagcctagac
    14521 catatacagg caaggaagat tctagagaat cctgtgttgc aacagttggg gcaacttcct
    14581 gctcaggaaa ttccttgggc acatcttctt cacgatagtc ttcatccttg acaaaacctg
    14641 gtggaagttt ttcctttgga accccttgct catccagctg actttccagt tccagctcat
    14701 tctggactac caagctaagc cccttgctga tgtctactcc ctcttcaatc tggacaatca
    14761 catctagcct atcgagctgc ttttgactgg tatctagctt aatggccagc ttttgaccat
    14821 cttccttcag atgttctaga tacttagtcc gaatggttag tggcgttgta gcactaactg
    14881 tttccgaaaa aattgttatc ggtaaccgaa taatatccag acatagaaca agtaataaga
    14941 aagaactaaa aaagtatctt acctttttca taacttttct ccatttcata tacttatatg
    15001 catcattatt ttttatcacg ttgtcattac gttgtcattc acctaatttg gcgtttcagt
    15061 tgattatact aaatttttca aaaaaataaa agtagtttac agcaaaaaaa caaacaaatt
    15121 ccactgatat atatatatat atatatatat atatatatgc aaatgcgatt ttttcagcag
    15181 ttttgcagag agcactgaaa aagtttttga aattttcttg gtttcaatca tacaaatata
    15241 tatagctttc atatatgttt attatgtcta tttatactca tttcatgatt ggtaactatt
    15301 gccttttatt tagactttta tactcaataa aaaatcccga ccttataggc cgagattttc
    15361 atattttgtt cgataaccaa tctgtaagat tttcccatct tgaatcaaga gaggacgttt
    15421 aatcagcata ccatcattag ctaataagtc taatgcttga tccaccgtta aactttcaaa
    15481 tttatccttc agaccaagtt cgcggtaact atttcctgaa gtattaaaat actttttcaa
    15541 ttcaagacct gttgcttcca tccaagcttt tagctcttca gcgctaggcg gtgttgactt
    15601 aatgtcaata gcttcaaatt ccaagcccaa actcttcagc tctgcttttg ctgcccgaca
    15661 agtcgaacat ttaggatatt cataaaataa gatcatttct tcacctcaaa tctcggattt
    15721 tcatgttgca agagccagat tttcttatcc agtccacctg cataacctgt caactgtcct
    15781 ttttgattga gaacacggtg acaaggaaca ataatagaat agggattgcg cccaactgct
    15841 cctcctactg cctgaccaga acgaatgtcc agttgctggg caagttgccc atagctagtc
    15901 gtctgaccat gagggatttc tttcaataaa gcccagactt tttcctgaaa ttcagtccca
    15961 atagcttcaa gaggcaggct agtaaaatcc acctcctcac ctgaaaaata agcatccagc
    16021 aagagactag tctggtctag aataggatgt gagcctagaa ctggttcttc agttagtcct
    16081 cgttcaaaat atttttgtcc ctcaaaccag gctcctcgca tgcccctatc actagcaaca
    16141 agggacatag gcccaagtgg actgtgatag atttgtttat acagcatgat tagtttttat
    16201 tctgaatgac acgcactttg acaattgcat cggtcgcttc aaagttagca actaactgat
    16261 caatctttgc cttatctgct tcatccaagt ctaacaaggt ataagcatag tcaccttttg
    16321 acttgttgat aatattgtca atgttgatgc ccaattcaga cacggctgtg gtgatttttg
    16381 ccaccatgtt tggaatgttt ttgttgatga gagtaatccg atagggagca tctaaaaatt
    16441 gtttcacatt tgggaagtta actgagttga tgatttcacc agtctccata aaacggcgaa
    16501 tggtctgacc agccgcaatg gcacagttaa gctccgcttc ttctgttgac ccaccaacgt
    16561 gcgggaagac aataatgttg tctttgttga gcacttcttc tgttccgaag tcagtgatgt
    16621 agttcttgat aactcctgct tcgatagctt caaacaggtc agcgttattg accaactcac
    16681 ctcgggcgaa gttaatcaaa gtcgttcctt tcttcatttg accaaagcta tccgcattga
    16741 acaaatcacg ggtcttgtct gtcaaaggaa catggactgt gatatagtca gcattgctaa
    16801 agatttcttt caaatcatct acccgtttga catggctgga aatgctccaa gccgtttcaa
    16861 tcgatacata aggatcgtaa ccgagaacat tcattcccaa acggcgggca tcgttggcaa
    16921 tacgcgcacc gatagcaccc aacccgataa cgcccaaagt tttgcctgaa atctctgtcc
    16981 ctgcaaactg cttcttacct gcttcaacct gcttaggtac atcatctcct gacaatgtat
    17041 ttgcccatgc cgttgctccg atatagtcac gtgctgacaa gaggatggaa gcaatgactg
    17101 cctcttttac ggcattggca ttggcacctg gagtgttaaa gaccacaata cctttctctg
    17161 ttgcctcttc gattggaata ttgttagtcc ctgcaccagc acgggcaata gctttcagat
    17221 tttcgggaaa atcaaagcca tgcaagtttt cagaacggat gataaaggca tctggattgg
    17281 ccgcatggtc cccatcaatc tggaaacgat tgcccaattc cttcaaacca acttggttaa
    17341 tattgttaaa agtacgtacg ctaaatacca tttattttta cctaaaaagg cggaatagct
    17401 gccgcctgac tttctttatt tcattaatta tttccgagta accaacggtc gtcttcactg
    17461 atttcctggt aaagactccg ctcgctctta tgcttgattt tttggtaggc tagacgttct
    17521 ccatctattg ggactttacc acaatagaca tagcctaatt tttttagaat gtgctgcatt
    17581 gtcttattct gctcgtgggt atcacagcgg aaatccggtc ctttttgacc ttcaattaaa
    17641 ccttgcaaaa acgtttgtat gattccttga ccacgaaatt cgtcagctgc tgcaattcta
    17701 tgaaatgttg tatatacagg atgattgtgc tgccattttc cttcatatat ggcctcatat
    17761 tctgcttctt gaccacgatg aacggcggca taagctgcca ccttaccgtc aactaggcca
    17821 acgtaacctc tgccagaaag aatgtcatca aagatatcct ctttatttgg atactctccc
    17881 tgccattgat tgataccgga ggttgctaga aatgcacgag catcttcaag aatattgaca
    17941 atagcctcca gctcattggg atgtgctaat ctaatttcca ttaagcattc tccgttgcaa
    18001 attttttcat gaattcaatt aattcaacca caccttgacg tgggaaagca ttatagagcg
    18061 acgcccgcat cccacctact gaacggtgac ctttgatgtt tttaaaacca gctgctgttg
    18121 cttctttgac aaatttagca tctaattctt cacttggtga gacaaaagga atgttcgcta
    18181 ctgaacgctc ttctttttta cgaacagggt ttgtatagaa attagactgg tcgatatagt
    18241 cataaagcaa accagatttt tcacggttga ttttctccat ctcatcgaca ccaccgattt
    18301 cttttaccca ttcaaagacg agtttagaaa tatagataga ataagctggt ggcgtattat
    18361 aaagagagtc attttctgct tgaatacggt agtccaacat gcttgaaagc attggttgat
    18421 cattgaggaa gtcctcacga acaatcacca ccgtcacacc agcaggacca atgttcttct
    18481 gagcacctgc ataaatcatg gcaaagtctt ccacattgta gcgagccgcc aagatgtttg
    18541 aagacatatc agcaatgact ggcacaccgt tggtatctgg aatgtcgtaa acagcagtac
    18601 cttcaatggt attgttggtt gtcaaatgca cataggcagc gtttggatcg atatcgtttt
    18661 tatcaaaggt tggcaattct gcataggtga tatcttctgt agagccaagc aagattggtt
    18721 caaagtcaat agtcttagat agcttaacag cctcagtata ggctttttta ccccatgagc
    18781 caccgacaag atagtaggct tttttacctt gggcaaagtt gagaggaatc atggtaaatt
    18841 ccaaagatgc tccaccttgt aagaacaaca ccttgtagtt atcaggaata gccataagtt
    18901 cacgcagggt cgcttcagca cctttaataa tatcatcgaa gtccttggag cgatgcgaca
    18961 tctccaaaac gctcattccc gaaccattgt agtccaagaa ttcagcttgg gcacgttcaa
    19021 gcactggttt tggcaatact gcaggacctg cagagaagtt gtagattgtc ataaaatccc
    19081 tccattaagt tagtctgttc attatatcac aaatattcag acaattccat aaaatatgct
    19141 gagttctcag aaaaggtacg gaaaatacct aaaaaccaaa aagaccaagc attagcctag
    19201 tccatgataa atatcgtata cttcttgttt tttgagttgg tagcgtttgg ccacttcttt
    19261 gatagcctga ttaggtttta tgccacttgc aatttccctt tctacctcag ccttcaagtc
    19321 cacttcgtca gcagaaggat agacttcctc accggcaccc tcgacaataa tcaagcattc
    19381 tcccttaaga ggattttctt ccaagtactc tagtaattcg gaaatgcttc ctctctggta
    19441 ttcttcgtat aacttggtca attctcgaac aaccgttacc tgacgatcac cataaactgt
    19501 caacatattt tctaaggtat ctgccacacg atatggagat tcatagaaaa tctgcgtctc
    19561 aggataggtc tttttttctt ggaaaaattc tttttgctgc cccgattttc tcggtaaaaa
    19621 tccataaaaa atatgtggct ggggtgccaa accagatgca atcaaggctg taattcccgc
    19681 cgatgctcct ggaagtgcta caacaggaat atcctccgca atcgctgccc ctaccagatc
    19741 atgaccagga tccgaaatgg aaggcaggcc tgcatcagaa acttgcgcaa tggactgacc
    19801 agatttgagc caatcaatca aaactggaat tttttcatgg gcattgtgtt catgaaagga
    19861 tatttgcttg gtttctactt caaaatgttt gagtaggagg cctgtatttc tcgtatcttc
    19921 cgctgcaatt atatccactt ctttcaaaat ctgaacagct cggaatgtca tatcctgtaa
    19981 gtttccaatt ggcgttggca ccaggtataa agtcccaaaa ctcgtctgtc ccttaaatga
    20041 tttttgtact ttcatcctaa tctcgattca ataattccac acagaacata caaggttcat
    20101 cattatccct acgttgacca taagagaagg tacaaatatg gaaaccatct tcgtaaatat
    20161 tctccaaatt ctccttacca aagttggaag atttatggcc tgtcttatca tctttttcca
    20221 aacgttcgcg caacttggaa ttttccaagc ggagggtcgt attttcatca ataactccct
    20281 gtaaatgctt tttgatagca tccacttctg ccaacgtggt tagaagattc tgcgaaaaat
    20341 catctagggc atcaaaaatt tcttttttat ccattatctc cctttctttt attttacaga
    20401 gttatatact ctagactatt ttgtagactt acgtttgcct gccacatctt cttagcctta
    20461 agaacagcat ccattttttc acgtacgttt gccgattcca tcattttctc agataatatc
    20521 agactcagaa ggtcaaataa acgtccctgc tcagcttttt ccacagctaa agacactagg
    20581 attccaactt gcaaataagc acgtgtaggc tccaccaaga gcaagtctgt aaatttcttt
    20641 gtctgtccca tcaaatctaa aaagttttta ttttctgcta actttttcgc ttcttcttga
    20701 cttgaaacca gttgagctaa gagattcgct tgtgttttta acaagccctc ctcttctaac
    20761 attcgctcca tggccggaat atttttagga aaacctataa tctgtgtccg actcttgata
    20821 gtaggaagaa cagcttcttc ctgattggtc aataagaaga tgtgaatggc tgactgaggt
    20881 tcttcaatca cttttagcaa agagttggct gcgttagcat gcattttctc agcatcacga
    20941 ataatgaaaa cctgcttatt ggattcaaat ccagattgtg aaaaattctt aactaattca
    21001 cgtatcgtat ctgttttgat aacatttccc tgcggtgcaa taacagtaag atctgaaaac
    21061 tcatttgctt caattaggcg acaagaccga cacttctgac aaggaagggc gccttctttc
    21121 tcctgacaaa ataacgattg actgagaaaa attgccatat caaaactagc aaagtcacct
    21181 gaaaatagat aggcatgcgc caaacgtctc tgctctaaaa ttgtcacaaa acgttgaaat
    21241 acattgggtt gtaagtttct aagttcttca atcttcatgt tctttctgca aaccgtttct
    21301 taatgaccgc cagagcatct gcaacaacag cctctagtgg ctgactggca tcaatcttta
    21361 caaaccgctc tggttcctgc tctaaaatac taagatagcc ttgacgcacc cgtctatgca
    21421 tatctgcttt ttccatatcc aagcgatcca catcacggtc agcattgcgg gcaattcgag
    21481 ccagcccctc ttctgtatca atatcaaaat agagggttaa atctggtttt aaaccatctg
    21541 ttgcaaactg gttgagccaa tgaatgtcat ctatatccaa cccccgtcca aatccttgat
    21601 aggcaataga ggaatcgata aaacgatcaa tcaagagcaa tttcccctgt gccaagggtg
    21661 gaagaatctt ctctttcaaa tgctgacgtc gtgctgcaat gaacaataac agctccgtct
    21721 tatcatccat cgctgtattt gcaggattga gaattatatt tcgaatttct tctgcaatag
    21781 ccaccccacc tggctctcta gttgtgacta cttctggccc caattcctgc aaggctggca
    21841 ataactgttg caataccgtt gttttccctg ccccatctgg accttcaaat gtaataaaaa
    21901 aaccgtttct catctttccc tcgctcttag taccagtatg cacagtccag cacttcactt
    21961 gtgaagactg gttcttagat attcattcca ttttaccaaa aattagtcaa aaaatcactt
    22021 ggaaattgac ttgtttttaa ggagaaaatc ttttaaaatt gatatataca catattcgga
    22081 ggtgcttatg gttcgtttga aaaatatttt acttattttg cttggtgcag ggctatttgc
    22141 ctttgggcta aattatttaa tcatgcccaa tcgtctattc gagggtggcg caactggatt
    22201 gacgctgatt atttactacc tttttcatat tcaaccttgg ataatgaaca ttgtaattaa
    22261 tattccattg ttcatcctcg ggtggaaaat actcggaaag aagactctct atctcagtat
    22321 cttaggaacc tttagcgtta ccttttggtt ggccattttt gaaaaaatcc atttttcaat
    22381 caatctacaa caagatttga tactcgttag tatcctgggt gggattctta tgggactagg
    22441 attaggaacc atcttccgtg ctggcggaac gactggggga agcgatatta ttgctcgtat
    22501 aggtcataaa ttcctacctt actccattgg acaaatcatt cttgcagttg acatcctcat
    22561 cctaactctg attgttattg tttttaaaga ccttcgtacc gtactctata ccttaatgat
    22621 gctgacaatt gcttctagaa tgattgattt tgttacagag ggcggatatg gtagcaaggg
    22681 tgttatgatt gtttctcaaa aatctgacca attggctcag gctattgatt gtgaaatcga
    22741 gcgtggtgtc acctttatca aggcacaagg tttctacagc aaagccgatg tcaacatgat
    22801 ttactcggtc atatataaga gccaactcca agagatgaag gagcttattc atcgcattga
    22861 cccccacgca tttatcacca ttacagacgc acatgaagta ctcggtgagg gatttacttt
    22921 agatcgagat aaaaaaccaa tagaacgcca ttaaacaaac ctgcagtttc gctgaactgc
    22981 aggttttata ttattgattg gtttcaagtg cttgctctgc ctcagactgt gcttctttgc
    23041 cttgctccag caaagcagca atgatttttt ggtcacgtag cttaacagaa tcgttgatag
    23101 tctctgctga ccgtacaata gctgcttcca actcccgacg tttctgacgc ccttcatcta
    23161 tagctgcaat aatgccatta ttttgggcaa ccaaactttc tgccaatttg gtaacagatg
    23221 ctactgaaag ggtcggattc tgagctgtgc gttccatcat cgggatagct tcttttgatg
    23281 tatccgcaag catttgaagg gcagcattat tagcattgac aatcgcatct gccgtctggc
    23341 tagacttgat agattgttgt aagattccca actgtgcaat ggacaatttc attgttggaa
    23401 tagtattgcg acgtaacatc ccaaggcgct gtctcatatc cgaagaaacc ttgaccagat
    23461 tacgcatctg cggtgtcgtt gtccacgcga catacaagcg actcatatac tcagaatgtt
    23521 gttgttcaag gatattagca acctctgtta cacgtgccaa cttctcagaa gctacttgat
    23581 aatcgactgt agttggttgc agacctgcca agcgttcttg ctctgctttt gctcgctggg
    23641 cagcctcttg accagtcgcc tcgataaagg caatcacgcc aactagattt tcaatagact
    23701 tggtattgtt ctcaatcaag agctccgctg atacaatatt gcgggacaag acttcctctt
    23761 gcttgaccac gctggctgcc atactatcca ttttcttttc aatggtctgc gaatcaaaat
    23821 aaaattcctg caaatcattt ttggtctgct tgaacaggcg ttggaagaaa cctggtttct
    23881 tttctaattc agcagttgtg gaaatgtcct tatacttagc cacaaaacca ttcaattcac
    23941 ggttggtatt ggccaaaagc tcatccacct gtggaatttc aatcttcttc tgttctgaca
    24001 aaatgtgatt gaccgtggca ttgacttctt ctaccgcttc cttaccaaaa tccaagaggg
    24061 cattttgatt agctaagaaa ttatccacca attggggagc cttggcacga atacctgttt
    24121 gttgttccgg tgtcaactgt gccaagaaag acacttttga attatctcca gtcggagtcg
    24181 cttgaataag ctctgttgtc ttatctttgg ttgataaact attattagca atctgatcaa
    24241 tatcgaaatt aaatcctgac atcttctcta ttcctcttct cttttcatca tacgcagact
    24301 gacttcaaaa tctttcatat ccgcttcgtt aaattgtttg atggtatcat ccaaatcctt
    24361 atcaaacatt tccatggctg attttgcctg caccaatcgt tcttctgcgt taaaataatc
    24421 tttcggtgat tttttgattt tcaaataccc ctgtaaaata tcgttaaacc gattcatatt
    24481 ggcctcatgg atagctgtca attcttcccg cttatctgtc gccttttcca gcttttcaag
    24541 aataacaaga ttgtctcttt gaatattaca ataggtttct agaatttcaa gagctaaatc
    24601 cgctatcatg ccttgttcat ccatcacagc attaccacca gtagaaacct gtgtgtcagt
    24661 atttttttct gttttagctt ctggcagttt taaatgatat tttagttgca aggtatctac
    24721 aacttcttta ctttcatatc cattcagata ttttccaact ttttgataga gcagatctaa
    24781 ttcaaataat tgtcctaaca gtctgtttcg caactgtaac acaaccttat cctcaccctt
    24841 ttccaccaag agctcttgat gcttttcata gcccgaacga atagatagcg ctaatacctg
    24901 caagcgtttt atagaatctc cattcaaaaa acgctggata gcctctctct tgtaaaaata
    24961 gccaattaag agcccaatgg gcaataagat ataccagaaa ctcatgacaa aaccgattgc
    25021 caataaaaca agaagggcca caagtcctga attattttta ccatatttct tatacttttt
    25081 atatttgtac cccatagagc ctcctcatac gaggctg
//
LOCUS       DASFQS010000021        25073 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.021, whole genome shotgun sequence.
ACCESSION   DASFQS010000021 DASFQS010000000
VERSION     DASFQS010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 25073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25073
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.021"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            4..924
                     /locus_tag="U1041_000764"
     CDS             4..924
                     /locus_tag="U1041_000764"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009568566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HEM4767889.1"
                     /translation="MKNEFLNFEQIDRATWQQLHRKTTIPLSQSELNSIKSFNDRIQL
                     HEVSDIYLPLVNLIHIYRKARKDLNFTKSLFLQKTIKPQPFIIGVSGSVAVGKSTTSR
                     LLQILIARTFKHAKVELVTTDGFLHPNAVLEERQLLNKKGFPESYDMEKLIDFLDKIK
                     NGYDCQIPVYSHEIYDIVPNKTQDIKSPDFLIVEGINVFQNPQNQRLYVSDYFDLSIY
                     VDADVEHIETWYLERFQKLLTLAKNDPNNYYHRFTQMTYPEILSIAQNTWKNINLANL
                     EKFIEPTRNRADIILHKAENHEIDKIYLKK"
     gene            983..1231
                     /locus_tag="U1041_000765"
     CDS             983..1231
                     /locus_tag="U1041_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018368578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEM4767890.1"
                     /translation="MEVKPLANIKSAIKRAELNVKQNEKNSAQKSAMRTAIKAFEANP
                     SEELFRAASSAIDKAETKGLIHKNKASRDKARLASKLA"
     gene            complement(1494..2723)
                     /locus_tag="U1041_000766"
     CDS             complement(1494..2723)
                     /locus_tag="U1041_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase"
                     /protein_id="HEM4767891.1"
                     /translation="MRKVSRGVLTVLISATVLSACSGGGQELSERLEAVKIEFSKEKK
                     QLEAELTALKEEVQGNFYYQQLDTDKERRVYLQFVNGLSKRMQVIDIDSVNDEIYSRV
                     YFSVAHDYPEFYWLTDEAAMSGGVDILDLEEPAYPTDLSPTRNKIEEEVNKILAQAPT
                     GSDYEKVKYFYEVIIKQTDYDLEALQTNSVTWRSQGITSVLLDKKSVCAGYSRTFQYL
                     CKKAGIDCIYVTGIAKNGQNGEFGHAWNLVKINGQYYGVDTTWGDPVFDQAISGEVHT
                     DISYDYLCVPDEILERSRIADTDLLDYWGEEQYYEPRVLTYPKCTDNSLNYYVQKGVY
                     FTSFDEAAVLQSLTDQRLQGTDKVVLQFGTAEAMQQMITLASTENNAIFQALGDVGEY
                     QYYYNDQTYTFELADWF"
     gene            complement(2824..4203)
                     /locus_tag="U1041_000767"
     CDS             complement(2824..4203)
                     /locus_tag="U1041_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM4767892.1"
                     /translation="MPKRIRKLVYTDKFSFFIRYFAVFTLIFGLMTAIIFQLMRSTMY
                     QNSDNTLKRIKEEPAMAVGFAIARTYEPNSVFILQDSPTSEETTSSSSDSKPVPEDQK
                     NTRDVDQLKLGINTHVLLYSKSGEMVNPDTFTGLADLPLDKEKLGEIKEAKVESSFGM
                     TEDYRYVTIELATDELGYYSPYDIKYATILVNVSQIKSSIETYESTVAIVMVSAWLIS
                     ILASIYLSNLSMRPILISYQKQKDFVENASHELRTPLAVLQNRLESLFRHPEATILES
                     SESIGSSLEEVRNMRLLTTNLLNLARRDDGLKVDMIDVQPNYFDEIFANYLMIAEENG
                     KTLTVNNLIHQPIRTDKVLIKQLLTILFDNAMKYTDDDGRIQITANIKDKSVYFTVAD
                     NGLGISDADKKKIFDRFYRVDKARTRQKGGFGLGLSLAQQIIKTLGGKISVRDNQPKG
                     TIFEVGLPK"
     gene            complement(4196..4867)
                     /locus_tag="U1041_000768"
     CDS             complement(4196..4867)
                     /locus_tag="U1041_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019320695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4767893.1"
                     /translation="MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGIYEAETGV
                     YDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTAKESLEDKGHGFELGADDYLTKP
                     FYLEELKMRIQALLKRAGKFNENTLTYGDVTVDLSTNSTTVNGEEVELLGKEFDLLVY
                     FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGY
                     ILKNA"
     gene            complement(5247..5561)
                     /locus_tag="U1041_000769"
                     /pseudo
     CDS             complement(5247..5561)
                     /locus_tag="U1041_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027076.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5711..6367)
                     /gene="phoU"
                     /locus_tag="U1041_000770"
     CDS             complement(5711..6367)
                     /gene="phoU"
                     /locus_tag="U1041_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000946475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEM4767894.1"
                     /translation="MLRAQFEEELGKLHNQFYAMGNEVLAQINNAVRAFTTHDRELAK
                     EVIEADKKINAFEVKLEKKSLEIIALQQPVSTDLRSVITVLKATSDLERMGDHAVSIA
                     KAAIRMKGEVRIPVVEEEIKKMGKEVRKLVEETLELYLANSDVEVAYEVAARDEIVND
                     FYSAIQELTTEEIKKNPESLVAGRDYFQVLTYLERVGDYAKNICEWVVYLRTGDITEL
                     "
     gene            complement(6396..7154)
                     /gene="pstB"
                     /locus_tag="U1041_000771"
     CDS             complement(6396..7154)
                     /gene="pstB"
                     /locus_tag="U1041_000771"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM4767895.1"
                     /translation="MTSPILQVKDLSVYYNKKKALNSVSIDFYPNEITALIGPSGSGK
                     STLLRSINRMGDLNPEVTLTGAIDYNGKNIYSPRTDTVDLRKEIGMVFQQPNPFPMSI
                     YENVVYGLRINGIKDKQVLDEAVERSLIGASIWNEVKDRLHDSAVGLSGGQQQRVCVA
                     RVLATSPKIILLDEPTSALDPISAGKIEDTLYGLKDKYTMVLVTRSMQQASRISDRTG
                     FFLDGDLIEYNLTKEMFLNPANKETEDYITGKFG"
     gene            complement(7166..7969)
                     /gene="pstB"
                     /locus_tag="U1041_000772"
     CDS             complement(7166..7969)
                     /gene="pstB"
                     /locus_tag="U1041_000772"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000852852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM4767896.1"
                     /translation="MADYNWNERHIITFPEENIALSTKDVHVYYGKNEAIKGIDMQFE
                     KNKITALIGPSGCGKSTYLRSLNRMNDTIDIAKVTGQILYEGIDINRPDMNVYEIRKH
                     IGMVFQRPNPFAKSIYRNITFAHERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKS
                     AFTLSGGQQQRLCIARAISVKPQILLMDEPASALDPIATMQLEETMFELKKDYTIIIV
                     THNMQQAARASDYTAFFYLGDLIEYDKTANIFQNAKLKSTNDYVSGHFG"
     gene            complement(7994..8881)
                     /gene="pstA"
                     /locus_tag="U1041_000773"
     CDS             complement(7994..8881)
                     /gene="pstA"
                     /locus_tag="U1041_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019316415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEM4767897.1"
                     /translation="MHAKKFDKLATGILYSIAGVIVVILTSLILYILLRGLPHVSWDF
                     LTSKSSSYKAGGGIGIQLYNSFFLLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRT
                     CIEILSSLPSVVVGLFGYLIFVVQFEYGFSILSGALALTVFNLPQMTRNVEDSLRHVH
                     HTQREAGLALGLSRWETVLHVVIPEALPGIVTGIVLASGRIFGEAAALIYTAGQSAPA
                     LDWSNWNPLSVTSPISIFRQSETLAVHIWKVNSEGTIPDATQVSAGSAAILLVFILIF
                     NLSARYIGKKLHAKMTSAA"
     gene            complement(8871..9788)
                     /gene="pstC"
                     /locus_tag="U1041_000774"
     CDS             complement(8871..9788)
                     /gene="pstC"
                     /locus_tag="U1041_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEM4767898.1"
                     /translation="MKNEQLAKELSSPSKNSRLEKFGKVITFLCLSLIVFIVAMILIF
                     VAQRGLSTFFVDGVSITDFLFGSKWEPSSKIFGALPMISGSFIVTILSAVVATPIAIG
                     AAVFMTEISPKRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGILSG
                     VFVLFVMILPTVTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAV
                     IFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATLTSVLTMGIGNTVMGTVQNNVLWS
                     LALVLLLMSLIFNMIMKFITREGKKNYAR"
     gene            complement(9791..10660)
                     /locus_tag="U1041_000775"
     CDS             complement(9791..10660)
                     /locus_tag="U1041_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS family protein"
                     /protein_id="HEM4767899.1"
                     /translation="MKKKQKLGIAALFLLSSMALSGCSSWIDRGESITAVGSTALQPL
                     VEAAADEFGSVNIGKSINVQGGGSGTGLSQVQSGAVQIGNSDVFAEEKEGIDASKLVD
                     HQVAVAGLAVIVNEKVTVDNITTEDLRKIFTGEITNWKELGGKDLEISIINRAASSGS
                     RATFDSVIMDGQTATQSQEQDSNGMVKSIVAQTPGAISYLSFAYLDDSVKTIKLNGFE
                     PTAENVATNDWPIWSYEHMYTMGNATDLTEEFLDYMMSDEVQDGIVESMGYISINDMK
                     VVKSADGTVSEKE"
     gene            complement(10798..12099)
                     /locus_tag="U1041_000776"
     CDS             complement(10798..12099)
                     /locus_tag="U1041_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmF rRNA methyltransferase first C-terminal
                     domain-containing protein"
                     /protein_id="HEM4767900.1"
                     /translation="MQLPQDFIDKYNHLLGSEAQAFFESFEQDAISGFRTNPLKESQL
                     DFEQPIPNMTWSYYGKISGKSPEHVTGLVYSQEPAAQVVGQIAAPEKGMKVLDLAAAP
                     GGKSTHLLSYLENTGLLVSNEISNKRARILAENIERFGARNVVVTNESADRLEKVFPG
                     YFDMIVLDAPCSGEGMFRKDPDAIQYWSKHYPAQCASLQREILESALNMLAPGGQLIY
                     STCTWSPEENEEVVTWLLEQYDLELIDIPKINGMVEGVGYPEVARMYPHHFAGEGQFV
                     AKFRFLGEVSQKKLKPGKSNLNREQQALWKEFEQKHLRVQLDGLLQVFGDNLYLLPHG
                     LPDLSKVKIARNGLHLGTFKKKRFEPSFALGLALYSSEVKNRVEISLEEFSSYTAGHT
                     IAVSKDLANGWYQVAVQGNGLGFAKIVSGTLKNGFPKGLRF"
     gene            complement(12099..12857)
                     /locus_tag="U1041_000777"
     CDS             complement(12099..12857)
                     /locus_tag="U1041_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEM4767901.1"
                     /translation="METKYHFAQTIVLEAGNFLRQHLHDDLQIEEKVDFTDLVTHLDK
                     QVQEMLTQQIQSRYQSDGILGEEGGDVSSIHEGNVWVIDPIDGTTNFIAQKTDFAIMI
                     AYFENGVGKFGIIYDVMRDKLFHGGDSFPVYCNQERLKKPELRPLRQSLIGINAKLYA
                     GNAHGVAELANKSLGTRSVGSAGIGFAHVLEGRLFAYASYLCPWDYAAASIIGSSLGL
                     VMLSFDGPSLAYDKREFVMLVSEAHLEEVKGYIF"
     gene            complement(12847..13125)
                     /locus_tag="U1041_000778"
     CDS             complement(12847..13125)
                     /locus_tag="U1041_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HEM4767902.1"
                     /translation="MNKNYSYPLDFSWSTEEISSVLSFLNQVEAAYEKGADAVAILAS
                     YKSFKDVVKSKGQERQIDRDFEAVSGYSTYRVVKAARDKGKGVIRFGN"
     gene            complement(13140..13541)
                     /locus_tag="U1041_000779"
     CDS             complement(13140..13541)
                     /locus_tag="U1041_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spx/MgsR family RNA polymerase-binding
                     regulatory protein"
                     /protein_id="HEM4767903.1"
                     /translation="MITLFLSPSCTSCRKARAWLTSHEVPFIEHNIMTSPLTAEELKN
                     ILALTENGTDDLISTRSKVFQKLDIDVDELSVKQLIGLIETYPSLLRRPIILDEKRMQ
                     IGFNEDEIRAFLPRKYRKQELKNATLRAEIG"
     gene            complement(13615..14352)
                     /locus_tag="U1041_000780"
     CDS             complement(13615..14352)
                     /locus_tag="U1041_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEM4767904.1"
                     /translation="MLKRLIRHPFYEKAMTYIAVVYVFLIVLALMDANIANSSGYRVL
                     DLLLWFVFVCDYFAQLYYADDILEYVQGHILELIAIIPFDLFFSFLRLGRLARLFRLV
                     KVTRIFALSNRFWDTINKLLHTNSLSKVLMLNISAVLVASVLLSVIEGKSFFDALWWS
                     IVTMTTVGYGDIVPQDTISKIIAILLMLVGICTFGMVTSTITRFFSETERETKLDTLM
                     AKIDEQNEILLRLEKKIESLEKLQGRE"
     gene            complement(14345..15268)
                     /locus_tag="U1041_000781"
     CDS             complement(14345..15268)
                     /locus_tag="U1041_000781"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEM4767905.1"
                     /translation="MKIRTIKNYQELHQEEPTVLVLGYFDGIHLGHKALLDRARQVAD
                     EKGLSVTVLTFPESPRLAFARFSPELLLHLTSQDQRYHLLEQYGVDQLVLTDFTSEFA
                     SNTPEQFLERYIKGLNAQVLVAGFDYHFGNCRADVKDLTELFDGQVEIVSEVSLGGEK
                     VSSTRIRQAIQSGDVSLANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLP
                     AEGVYVADVEVDGKRYRAMTSVGKNVTFDGTEMRIEAHIFGFDRFIYGEKITIYWLEK
                     IRDMVKFDGIEGLMEQMKSDEEFALQWEKYA"
     gene            complement(15288..16178)
                     /gene="truB"
                     /locus_tag="U1041_000782"
     CDS             complement(15288..16178)
                     /gene="truB"
                     /locus_tag="U1041_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006597324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEM4767906.1"
                     /translation="MSGIINVKKEAGMTSHDVVFKLRKILQEKKIGHGGTLDPDVTGV
                     LPIAVGKATRMIEYMQEEGKIYEGEITLGYSTTTEDASGDIVERTPVLDIAEQAVDEA
                     MASFVGTITQIPPMYSAVKVKGRKLYEYARAGEEVERPQRQIEIYSFERTSPIERADD
                     CARFTFRVRCGKGTYVRTLSVDLGAKLGYASHMSKLERTGSAGMSLADALTIEEIAEK
                     VSQEDFSFLRPIEQGIGDLPIVDLTIEQVIDARFGRFITLDSQAELLAGFHKEKLVAI
                     LEKRDQVYKPRKVFLEEVLA"
     gene            complement(16231..16554)
                     /locus_tag="U1041_000783"
                     /pseudo
     CDS             complement(16231..16554)
                     /locus_tag="U1041_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018364639.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
     gene            complement(16565..19297)
                     /locus_tag="U1041_000784"
     CDS             complement(16565..19297)
                     /locus_tag="U1041_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4767907.1"
                     /translation="MKDRKIILIDGEDKSENIESLQSIRYKGKLYFEIYFKNNVQPYR
                     YNVQRVEVLKFSKQLNPSEIGVYRRQDGVLLNNIESMFEFNGTHSRAYIIRYKNGTGK
                     LYMGRDLEIRQNELTHLNSRHVFSYLTELSKLNPLRNSGTDQLLLLKRYEELDYVDKT
                     VALASYLSPSKKNNLPFHGELIFPFGCNNSQYKATKNALINQFSVIQGPPGTGKTQTI
                     LNIIANIVIRNKTVLIVSNNNAAIDNIYEKLKNYGLDFPVAYLGSEKNKNNFILNQHS
                     MYPDFSSWRLKDNGMESLDKELNEKIRRLPRIFEIQEELANLRQELSELETEFRHFKD
                     FFEHIDISPIELNLYSSKKLFKLWNEFEEFYKKNKRFGLIFKIKNFLLYGVKNWELYK
                     QELSDLTIQFQNLFYQHKQTEIRTKLETLQEELVHLNGTEVLNNLTSDSLKIFKDFLV
                     SKYGNERNRVQFTKEDLREQSKRVLLEYPIVLSTTFSSTTSLGKDITYDYLIIDEASQ
                     VDITTGALALSCAKNVVVVGDSKQLPHIVTKDVKESSAQLFHKYGVHSGYEYTNSFLQ
                     SVLKVIPNIPETLLREHYRCHPKIINFCNQKFYNGDLVIMTGDNGEKDVLQAIRTPKG
                     NHARDHYSQREIDIILKDVIPNYEIYRERTGVVTPYRKQKEKLQEQIDDLESDTVHKF
                     QGKEKDTIIISTVDNSITRFTDDPYLLNVAISRAKNKLFLVMTGNEQSLDKNISDLLG
                     YIQYNNFEVRESPIYSIFDYLYKQYEQEKEEYFRKRKRISRYDSENLMYHRIREVFVS
                     DEKYNSLDVIHDYKLHNLVKDFTRLTEVEAKYARHGNTHLDFLIINRLTKAPVLAVEV
                     DGYAFHKGNSKQFERDIMKDNILKKCDLPLIRFKTNESQEKEKLIEILDGLLGR"
     gene            complement(19323..20582)
                     /locus_tag="U1041_000785"
     CDS             complement(19323..20582)
                     /locus_tag="U1041_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HEM4767908.1"
                     /translation="MHQITCPHCGTAFQVNETEYSQLLAQVRGAEFDKEIHDRLERER
                     ELLSQKAENDLQARLSDKDKEILELTAKLDKFASQTELEISSAISQKDQEIQELKAQL
                     GQIGLAKDLELQQAVAQVEKERDAAQNALVLQEQKQELALATTRQEYEVRLKAADEQV
                     EFYKNFKAQQSTKAIGESLEQFAEAEFNKVRSYAFPRAKFAKDNEVSASGSKGDFIFR
                     DFDESGLEFISIMFEMKNEADTTKTKHKNADFFKELDKDRREKKCEYAVLVSMLEADN
                     DYYNTGIVDVSHEYEKMYVIRPQFFIQLIGILRNAALNSLQYQQELALVKEQNIDITH
                     FEEDLEIFKNAFAKNYQSASNNFQKAIDEIDKAIKRMEAVKAALTTSENQLRLANNKL
                     DDVSVKKLTRNNPTMKAKFEALREEED"
     gene            complement(20589..20846)
                     /locus_tag="U1041_000786"
     CDS             complement(20589..20846)
                     /locus_tag="U1041_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767909.1"
                     /translation="MKKWWEQLKEEYYETRFNSNEDWMEWFIKRKMTWGWRWPTAITI
                     FVLWALSLPDARNAVRFFYFLLALGVATVLHKLISYLKRRK"
     gene            complement(20864..21334)
                     /locus_tag="U1041_000787"
     CDS             complement(20864..21334)
                     /locus_tag="U1041_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEM4767910.1"
                     /translation="MKISVKKEVGHYLLSICYSVSASLAESWDLLATDSGFAHWFPQL
                     RVEGDKLVFEMEGFREVMDLLEYRKNEKIAYRWDSATVSFTLSQLENQTLITFEERIP
                     EDFDNEFANAQKDMTGWLVQNECIKKFLEGQEPPVRQPLQEKWKTFLDLELEGL"
     gene            21528..22343
                     /locus_tag="U1041_000788"
     CDS             21528..22343
                     /locus_tag="U1041_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEM4767911.1"
                     /translation="MIKLIALDMDGTLLNEKKELMQPQIDAIHQAVEAGVKIVLCTGR
                     PLAGVKPFVEQLGFDTEEEFIIVNNGCSTHSTKDWSLIDWEELSSSDIDYLSTFIEND
                     DVQISLFDEEDYFVLAEKANARVNLDAGLVGMTPQPIVLKEAKSGQHRFFEAMFVGEK
                     EHIDAFENQHNPILSQGYSTVRSQDYLLEILPNGASKATGLKKLADRLGILPEEIMAM
                     GDANNDLEMIEFAGLGIAMGNANEQVKAIAQDITDTNENNGVAKAIEKHILNK"
     gene            22353..23573
                     /gene="pepT"
                     /locus_tag="U1041_000789"
     CDS             22353..23573
                     /gene="pepT"
                     /locus_tag="U1041_000789"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HEM4767912.1"
                     /translation="MKYPTLLDRFLVYVKENTRSDENSTTTPSTQNQVEFAQNILLPE
                     MKRIGLQNVHYLPNGFAVGTLPANDPSLTRKIGFIAHMDTADFNAEGVNPQIIENYDG
                     NPIALGTSGYELHPKDFPQLANYHGQTLITTDGTTLLGSDDKSGIAEIMTAIEFLVQN
                     PDIKHCEIRVGFGPDEEIGVGADKFDVEDFDVDFAYTMDGGPLGELQYETFSAAGAKI
                     DFLGRNVHPGSAKDQMINAFQLAIDFHNALPETDRPEKTEGYEGFFHLMNMEGSVDTA
                     STTYIIRDFEEADFQARKQLMLDIAEKMNAKFDTPRVIVNLHDQYYNMKKIIEKDMTP
                     INIAKDVMENLGIKPLIEPVRGGTDGSKISFMGIPTPNIFAGGENMHGRFEFVSLETM
                     EKAVDVILGIVAYK"
     gene            23704..24102
                     /locus_tag="U1041_000790"
     CDS             23704..24102
                     /locus_tag="U1041_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767913.1"
                     /translation="MTEETLAQGILIGIWGTTLLFSFIWYILVAISNYILFKKAGYAG
                     WKSLIPIYNLYIQQCIAFGYEKRWFILFLLIPLAGPLYGIYLVYNFGRSFGLSAVQAI
                     FYVLLTPIFNLYIAFNDGSRYQGPQEFFID"
     gene            complement(24138..25052)
                     /locus_tag="U1041_000791"
     CDS             complement(24138..25052)
                     /locus_tag="U1041_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEM4767914.1"
                     /translation="MNELELLARALGFIFVIGLGYTLKVKGIVRREDARIFSSLVMNI
                     TLPASLLVASATAQVSIDLYVPFILGILCNLFLDMVGYWEAKKSGQQTSVGLMQLSGY
                     NIGTFTLPFVQAFFPLSSLLSVIVFDAGNAIMVLGGNYSIAAGVDEEQERMTVATFIK
                     NLSRSVPLVVYLVSLSLAVCSIKLPRELISALTIASNANPFLAMLMLGILLDLKLNWK
                     EISRLAYLLSLRLGANILIAGVIYFLLPIDKTMKIMLLVCLVSPISVMSPIYALKLGS
                     RSAEPANVNSLSILVSLVMMVLLIFLFV"
BASE COUNT         7471 a         5592 c         4367 g         7643 t
ORIGIN      
        1 tgtatgaaaa acgaattttt aaattttgaa caaattgacc gagccacttg gcaacaacta
       61 caccgtaaga ctaccattcc acttagtcaa agcgaactaa attctattaa aagttttaac
      121 gaccgcattc aattacatga ggtttctgac atctatcttc ctttggttaa tcttatccat
      181 atctatcgga aagcacgcaa agacctaaat tttacgaaga gtttatttct acaaaagact
      241 atcaagccac aaccatttat cattggcgtt tctggaagtg ttgctgtcgg caaatcaaca
      301 actagtagat tgctgcaaat tcttatcgct cggacattta aacacgccaa ggttgaatta
      361 gtgacaacag atggttttct ccatccaaat gcggtcttag aagaacggca actgttaaat
      421 aaaaaggggt ttcctgaatc ctatgacatg gagaaattga ttgatttcct tgataagata
      481 aaaaacggct acgactgcca aattcctgtc tattcacatg aaatctatga tattgtcccc
      541 aacaaaactc aggatattaa gtctccagat ttcttgattg ttgaaggaat caatgtattt
      601 caaaatccac aaaaccagcg cctctatgtc agtgactatt ttgacctatc tatatacgtt
      661 gacgctgatg tggagcatat tgaaacctgg tacttggagc gattccaaaa attattgaca
      721 ttggcgaaaa atgaccctaa caactattac catcgtttta cccagatgac gtaccctgag
      781 attctatcta ttgcccagaa tacttggaaa aatattaatc tagctaactt agaaaaattc
      841 attgaaccaa ccagaaaccg tgctgatatt attcttcata aggccgaaaa ccatgagatt
      901 gataaaattt atctaaaaaa ataaatttca cttgtcaaaa acactctttt cagatataat
      961 ggtatagtta gtacaagaaa gggtggaggt gaaaccattg gcaaacatta agtcagctat
     1021 caaacgcgct gaattgaacg ttaaacaaaa cgagaaaaac tcagcacaaa aatcagctat
     1081 gcgtactgca atcaaagcat ttgaagctaa cccatctgaa gagcttttcc gtgctgctag
     1141 ttcagcaatc gataaagcag aaactaaagg tttgattcac aaaaacaaag caagccgcga
     1201 taaagcacgt cttgcatcaa aacttgctta attaaaaaag aaacctttgg gtttcctttt
     1261 ttttattttt tccatcataa ggaggcggga caaagtggat cagttttccc tcgatgaata
     1321 acatcattaa ctcgtcaacc acaaagccct cactaagatt atacacctag tgagggcttt
     1381 atgtttgttt tcattattct gtgggtgagg gcggagccat catggatgtc tttcccactc
     1441 cctatttttt attattaggg aagaacacgc tcctagagat tcaaactaat tcgttagaac
     1501 caatctgcca gttcaaatgt ataggtttgg tcattataat agtactgata ctctcctaca
     1561 tcgcccaagg cctgaaaaat agcattattt tcagtagagg ccaatgtaat catttgttgc
     1621 attgcttctg ctgttccgaa ttgcaagact actttatccg taccttgtag acgctggtca
     1681 gtgagggact gtaaaactgc agcttcatca aaacttgtga aataaactcc cttttgaaca
     1741 tagtaattca atgaattatc tgtacacttt ggataggtca atactctagg ttcgtaatat
     1801 tgttcttctc cccagtagtc gaggaggtcg gtatcagcaa ttctacttct ctctaatatt
     1861 tcatcaggga cacatagata atcgtatgaa atatctgtat gcacttctcc acttatagct
     1921 tgatcaaaaa ctggatctcc ccaagtcgta tcaacaccat agtattgtcc atttatcttg
     1981 actagattcc aagcatgccc aaactcaccg ttttgcccat tttttgcaat ccctgtgaca
     2041 tatatacaat caatgcctgc ttttttacat agatattgga aggtgcgact atagccagca
     2101 caaacggatt tcttatctaa tagcacactg gtaattcctt ggcttctcca cgtgacagag
     2161 ttggtttgta gggcttcaag gtcgtaatcc gtttgcttta taatcacctc ataaaaatat
     2221 ttaaccttct catagtccga ccctgttggt gcctgagcaa gtattttatt cacttcctct
     2281 tctattttat ttcgtgtagg agataaatca gtcggatacg ctggctcttc taaatccaat
     2341 atatcaactc cgccactcat tgccgcttca tctgttagcc agtaaaattc tggataatca
     2401 tgagcgacag aaaaatagac gcgcgaatat atttcatcat taacagaatc aatatcgatc
     2461 acttgcatcc gcttgctgag cccattaaca aattggagat agacacgacg ttccttatca
     2521 gtatccaatt gttggtagta gaaatttcct tgaacctctt cttttaatgc tgttaattct
     2581 gcttctagtt gctttttttc tttagaaaat tcaattttaa ctgcttccaa acgttcactc
     2641 agctcttgcc ctcctcctga acaagcagat aggactgtcg ccgatattaa tacggttaaa
     2701 acgccacgag aaactttcct catatttacc tccattcttg tttaagtata acataattag
     2761 gagactactg acgaactaca caaaaaaatt agactagaat tttcctagcc taataatatt
     2821 gttttattta ggtaatccta cctcaaaaat agttcctttc ggttggttat ctctaacaga
     2881 gattttccca cctagtgtct tgataatttg ttgagccagc gataatccta gaccgaaacc
     2941 acctttttga cgcgttctgg ccttatcaac tcgataaaag cgatcaaaga ttttcttctt
     3001 atcagcatcg ctgattccca aaccattgtc ggcaactgtg aagtagacag atttatcctt
     3061 gatattagct gtaatttgaa ttctgccatc atcgtcggta tacttcatgg cattgtcaaa
     3121 taaaatggta agcaactgtt taatcaggac cttgtctgtt cgaatcggct gatgaatcaa
     3181 attattaact gttagtgttt ttccattttc ttcagcaatc ataaggtaat tagcaaagat
     3241 ttcatcaaaa tagttgggtt ggacatcaat catatcgact tttaagccat catcacgacg
     3301 agccaaattg agtaggttcg ttgtcaataa tcgcatattt cgaacttctt ctaaactaga
     3361 tccgatgctt tcactactct ctaaaatcgt cgcttcggga tggcgaaata ggctctccaa
     3421 gcggttttgg agaacagcca acggcgtacg caactcatga ctagcatttt caacaaagtc
     3481 tttttgcttt tgatagctaa ttagaatcgg acgcatacta agatttgata ggtaaatact
     3541 ggccaagata gaaatgagcc aagctgatac cataacaata gcaactgtcg attcataggt
     3601 ctcaatggag gattttattt ggctgacatt cactaaaatt gtcgcatatt ttatatcata
     3661 gggcgaataa taacctagtt catctgtagc cagctcaatc gtcacatagc gataatcttc
     3721 agtcataccg aagcttgatt caacctttgc ttccttaatc tcgcccaatt tttccttatc
     3781 taacggtagg tcggccaaac cagtaaaagt atccggattg accatttctc cacttttact
     3841 atagagtaag acatgagtat tgatacctaa tttcagctga tctacatctc tagtattttt
     3901 ttgatcttca ggaacaggct tgctatctga gctagagctc gtcgtttctt cactagttgg
     3961 gctatcttga agtataaaga cagagttagg ctcatacgtt cttgcgattg caaaaccaac
     4021 agccatcgct ggctcttcct taatccgttt caaggtatta tctgaatttt gatacatagt
     4081 tgaacgcatt aattgaaaaa tgatagctgt catcaaacca aaaatcaggg taaatactgc
     4141 aaaataacgg ataaagaagg aaaatttatc cgtatacact aattttctga ttcgcttagg
     4201 cattttttag aatgtacccg acactacgca gggtttgaag attttccccg aaggtcgttc
     4261 ctttcaactt tttcctaatt ttagaaacat atacttctac tactgaaata gtagtgtcac
     4321 tgtcaaatcc ccaaatacgg tcaaaaattt gagtttttgg taagataaca ttttgatttt
     4381 gcaagaagta gactagtaga tcgaattctt ttcctagcaa ttcaacttct tcgccattta
     4441 cagttgtaga gtttgtcgat aagtcaacgg tcacgtcccc ataagttagt gtgttttcat
     4501 taaacttacc cgctcgtttt aatagagctt gaattcgcat cttcaattct tctaaataaa
     4561 acggttttgt caagtagtca tcagctccca attcaaaacc atggccttta tcctcaagac
     4621 tttccttggc tgttgtaatc agaactggtg tcgtaacacc tttttcacgt aactctttca
     4681 aaacttggaa gccatctttt tcaggcaaca tcaaatccaa aagaatcaaa tcataaacgc
     4741 ctgtttccgc ctcataaata ccctcttcac catcaaaaac ctgcataaca tccgcaaaat
     4801 catctaggaa gtcaaaaact gaattggata ggcttaaatc gtcttctact aacaaaatct
     4861 taatcatgtc tatctcctta acctaacatc taaaagacaa ttcaaagaca caagtaaaaa
     4921 cttggtcttt gaacatattt cttcacttta ataagttgcc tctgcatttc tgtcagagtt
     4981 taatttatta taccacttat ctcaaatttt tcctattggt ttgaagtgct agaactacct
     5041 gaaatttggg attttatttc ttgattcttc tcttttaaag catttacctc atctgaggaa
     5101 gtatttgatt gtgttgcacc acttgtagca tctggagggg ttgtcccttg accagggggc
     5161 attccttggg tattgccatt ttgaccaggt ggcataccac gcatctcacc gtttcgacca
     5221 gatgacattc cttgggttgt ttcgcctgtt gcatctggtg gagtcatacc ttgactattc
     5281 ccattctgtc ctggaggcag gccttgagtg tttccatttt gaccaggtgg caggccttgc
     5341 ataccaccat tagaggcggg cggcatttga ttacctgcga ttgaattagc ttgtccgttc
     5401 gttgctccat tctgagctaa tgccgcttgg ctttgtgtcg atacagctgt tgaagatttt
     5461 gaaatgctca tacctccagc aaaacctaca gttgctgccg taatagcaac cgctgccaaa
     5521 actgttttcg actgtgactt taattgattg attattgaca taaaattcct cttttcaata
     5581 aaattttatc atagcgagtc tttactcacc tgatgacacg aacagtatag aatgagaaac
     5641 ttaaaccaag ctaaagattc attgcatttt ccttaaagca aactaaaaga agtcctttcg
     5701 gacttccatc ttacaattca gtaatgtcgc ctgttcgtag gtaaacaacc cactcacaga
     5761 tatttttagc atagtcacca acacgttcca agtaagtcaa cacttggaaa tagtcacgac
     5821 cagcaaccaa ggattctgga ttcttcttga tttcttctgt tgttaattct tggatggctg
     5881 aataaaagtc attgacgatt tcatcacgag ctgccacttc ataagcgacc tcaacatcag
     5941 agtttgctag atatagttcg agcgtttcct ccacaagttt gcgaacttct ttccccattt
     6001 tcttgatttc ttcctcaact acaggaatac gaacttcgcc cttcatccga atagcagctt
     6061 ttgcaataga cacagcatga tcccccatac gctccaagtc gctggttgct tttaaaacag
     6121 tgataacact ccgtaaatct gtagaaactg gttgttgaag ggcgatgatt tcaagtgatt
     6181 ttttctccaa tttcacttcg aaagcattaa ttttcttatc tgcttcaatg acttcttttg
     6241 ctaattcacg atcatgtgtt gtaaaggcac gaacggcatt gttgatttgt gccaacactt
     6301 cgttccccat ggcgtaaaat tggttatgaa gttttcctaa ttcctcttca aattgagctc
     6361 ttaacatgtg aacctctttc tttttcttat aggccttagc cgaacttacc tgtaatgtag
     6421 tcttctgttt ctttattggc aggattcaag aacatttctt ttgtcagatt gtattctatc
     6481 aaatcgccat caaggaagaa acctgttcga tctgaaatac gtgatgcctg ttgcatagaa
     6541 cgtgttacta gcaccattgt atacttatct ttcagaccat aaagtgtgtc ctcaatttta
     6601 ccagctgaga ttgggtcaag ggctgacgtt ggctcatcca acaaaataat ttttgggctt
     6661 gttgccaata cacgggccac acatacacgt tgctgctgac cacctgaaag tccaactgct
     6721 gagtcatgca agcgatcttt gacctcgttc caaatagatg caccaatcaa ggaacgctca
     6781 actgcttcgt ccaagacctg cttgtccttg ataccgttaa tacgtaaacc ataaacgaca
     6841 ttctcgtaga tagacatcgg gaatgggttt ggttgttgga ataccatacc gatttcctta
     6901 cgaagatcaa cagtatccgt acgaggactg tatatgttct ttccgttgta atcaatcgca
     6961 cctgtcaatg ttacctctgg gtttaaatct cccatacggt taatagaacg caagagggtt
     7021 gacttaccag aaccagatgg tccaatcaaa gcagtaattt catttggata gaaatcaatt
     7081 gaaacactat tcaaggcctt tttcttattg tagtaaacag ataaatcttt tacttgtaaa
     7141 ataggtgatg tcatagtttt cctttctatc caaagtgacc agaaacgtag tcattggttg
     7201 acttgagttt tgcattttgg aagatattcg ctgtcttgtc gtactcaatc aagtcgccaa
     7261 gatagaagaa agctgtataa tcacttgcac gagccgcttg ttgcatgttg tgcgtaacga
     7321 tgataatggt gtagtctttc ttcaactcaa acatggtttc ttccaattgc atggttgcta
     7381 ttgggtccaa ggctgaagca ggttcatcca tgagcaagat ttgtggtttc acagaaatcg
     7441 cacgtgctat acacaaacgt tgctgttgtc cacctgacaa ggtaaaggct gacttatgca
     7501 aatcatcttt cacctgatcc cagagggctg cttgtttaag agaagtttca acgatctcat
     7561 ccaaaacttt tttatctttc acgcctgcac gttcatgtgc gaatgtgatg ttacggtaaa
     7621 tagattttgc aaatgggttg ggacgttgga ataccattcc gatatgctta cgaatttcgt
     7681 aaacgttcat atctggtcta ttgatgtcga ttccttcata aagaatttga ccggttacct
     7741 tagcaatatc aatagtatca ttcatacgat taagactgcg aagataggtt gatttcccac
     7801 accctgatgg tccaatcaag gctgtaattt tatttttttc gaactgcata tcaatgccct
     7861 tgatcgcttc atttttacca tagtaaacat gaacatcttt tgtcgaaagg gcgatattct
     7921 cctctggaaa agtaatgata tggcgttcat tccagttgta atctgccatt ttttctcctt
     7981 ataagtcaga cttctaggct gctgaagtca ttttcgcatg aagtttctta ccgatatatc
     8041 gtgcagaaag gttgaaaatc aagataaata ccaagaggat tgctgctgaa ccagcagaaa
     8101 cttgggttgc atctggaatt gtaccttcgc tgtttacctt ccagatatga accgcaaggg
     8161 tttctgattg acggaagata gaaatcggac tagtaacact caatggattc cagtttgacc
     8221 agtcaagagc tggagctgac tgaccagccg tgtagataag agctgctgcc tcaccaaaga
     8281 tacgaccaga tgccaagacg atacctgtta caatccctgg aagtgcttct ggaataacaa
     8341 catggagaac agtttcccaa cgtgatagac ctagagccaa tcctgcttca cgttgtgtat
     8401 ggtgaacgtg acgaaggctg tcctctacgt tacgtgtcat ctgtggtaag ttgaagactg
     8461 taagagccaa ggcacctgat aagatagaaa aaccgtactc aaactgaaca acgaaaatca
     8521 agtaaccaaa caaaccaacg acaacggacg gtagggatga caaaatctca atacaggtac
     8581 ggataaagtt agtcaatgga ccttttttag catattcagc caaataaata cctgcaccgg
     8641 ttgacaaggg aacagaaatt aagagcgtta caaccaatag gaagaatgag ttgtagagct
     8701 gaattccaat accaccgcca gctttgtaag acgaagattt acttgtcaaa aaatcccagc
     8761 ttacatgtgg cagaccacgt agcaagatgt aaagaatcag tgacgtcaag ataacgacaa
     8821 tcacaccagc gattgagtaa agaataccag tcgccaattt atcaaatttt ttagcgtgca
     8881 tagtttttct taccctctct tgtaataaat ttcataatca tgttaaagat aaggctcatc
     8941 aagagcaaga ctagggccaa ggaccatagg acgttgttct ggacagttcc cataaccgta
     9001 ttaccgatac ccattgtcaa aacagaagtc aaagtcgctg ctggcgttgt caaggaagtc
     9061 gggataaccg cagagttacc aactaccatc tgaatcgcca aggcttcacc aaaggcacgc
     9121 gccataccaa agataacggc cgtaaaaata cctggcttag cagcattcaa gataacacgc
     9181 caaatcgtct gccaacgagt ggctcccata gccaaacttg cttcacggta gtgacggggt
     9241 actgcacgca aactgtcaac cgtcataaag gttactgttg gcaaaatcat aacgaaaagt
     9301 acaaatacac ccgacaagat accgaaacct gttccaccga agattgaacg tacaaatggc
     9361 acaactactt gcaaaccaat gaaaccatat acaaccgatg gaataccaac caaaagctcg
     9421 ataacaggtt gtaagatttt tgcaccacgt tttggtgata tttctgtcat gaagaccgct
     9481 gcaccaattg cgataggggt cgcaacaaca gctgacagaa tcgtaacaat gaaagaacct
     9541 gaaatcattg gcagggcacc aaatattttc gagcttggtt cccacttgct tccaaataag
     9601 aaatcagtga tgctcacacc gtcaacaaag aaagtcgata atccacgctg tgcaacgaaa
     9661 atcaaaatca ttgcaacaat aaagacaatc aatgacagac aaaggaatgt aattacctta
     9721 ccaaacttct ctaatcgaga gtttttagat ggagacgata actcttttgc tagttgttcg
     9781 tttttcatgc ttactccttc tcagacaccg tgccatcagc acttttcaca actttcatat
     9841 cgttgataga aatgtatccc atactttcaa cgataccatc ttgaacctca tctgacatca
     9901 tgtaatctaa aaattcttct gtcaaatcag tcgcatttcc catcgtatac atatgctcat
     9961 aggaccaaat tggccaatca tttgttgcta cattttcagc agttggttca aaaccgttta
    10021 gcttaattgt tttaactgaa tcatctagat aagcaaatga taggtaggaa attgcacctg
    10081 gtgtctgagc aacaatagat tttaccatac cgttagaatc ttgttcttga ctctgagttg
    10141 cggtttgtcc atccatgata acactatcaa aggtcgcacg tgaacctgaa ctagctgcac
    10201 ggttgatgat tgaaatctcc aaatccttgc caccaagctc cttccagttg gtaatctcac
    10261 cagtgaaaat cttacgaaga tcttctgtgg taatattatc aactgtgact ttttcattga
    10321 caatcacagc aagacctgca acggcaactt gatggtctac caatttgctg gcatcaatcc
    10381 cttctttttc ctcagcaaat acgtcagagt tcccaatttg aacagctcca gactgaactt
    10441 gtgacaagcc agtacctgac cctccaccct gaacgttgat ggatttaccg atattgacac
    10501 taccaaattc atctgctgct gcctcaacaa gtggttgaag cgctgtcgaa cctacggctg
    10561 taatagactc tcctcgatcg atccaagaag aacaacctga aagagccata ctactcaaaa
    10621 gaaacaaagc tgcaattcca agcttctgct tttttttcat ttcgtttttt cctttacatt
    10681 tttcagtgga atctcctaaa attaactctg tattttacat agaatttaca agatatttcc
    10741 actcatccac tatatcatat aaaaagacaa gttgcaaaaa aaatttgctg atttatttta
    10801 aaatctcaac ccttttggaa agccgttttt aagcgttcca gatacaattt ttgcgaaacc
    10861 aagaccgttc ccctgaactg ctacctgata ccagccatta gctaaatcct tggaaacagc
    10921 tattgtatgt ccagcagtat aggacgagaa ttcttctaag ctgatttcca ctcgattttt
    10981 aacctccgaa ctatagagtg ctagacctaa agcaaaactt ggttcaaatc tttttttctt
    11041 aaacgtcccc aagtgaagac catttcgagc aatctttact tttgacaaat caggaaggcc
    11101 gtgtggcagt aggtagagat tgtcgccaaa aacctgcagt aaaccatcca attgaaccct
    11161 taaatgcttc tgttcaaatt ctttccagag agcttgttgt tctctattca aattggattt
    11221 tcctggtttt aattttttct gactgacttc ccctagaaat ctaaatttgg caacgaactg
    11281 accttctcct gcaaaatggt ggggatacat acgagcaact tctggataac cgactccttc
    11341 taccattcca ttgattttgg gaatgtctat tagttccaaa tcatactgtt ctaagagcca
    11401 cgtcactact tcttcatttt cctctggtga ccaagtacaa gtagaataaa tcaattgacc
    11461 acctggagcc aacatgttca aggccgattc taaaatttca cgctgtaagc ttgcacattg
    11521 tgctggataa tgtttggacc aatattgaat cgcatcgggg tcttttcgaa acatcccttc
    11581 acctgaacag ggagcgtcta ggacaatcat atcgaaatat cctggaaaga ccttttccaa
    11641 gcggtctgct gattcattgg tcacgactac atttctcgct ccgaaacgct caatattttc
    11701 agccaatatc cttgctcgtt tgttagaaat ttcattacta accaagagtc ccgtattttc
    11761 taagtatgaa agcaagtggg tagactttcc tcctggcgct gctgccaagt ccaatacttt
    11821 catccctttt tccggggctg caatctgacc gacaacttgt gcagctggct cttgtgagta
    11881 gactaagcca gttacatgtt ctggagactt ccctgaaatc ttaccatagt atgaccaagt
    11941 catattaggg attggttgct caaagtccaa ttggctttct ttaagaggat ttgtgcgaaa
    12001 tcctgagatt gcgtcttgtt caaaactctc aaaaaatgct tgggcttcac taccaagcaa
    12061 atgattatat ttatctataa aatcctgtgg taattgcatt agaatatata ccccttcact
    12121 tcctcaagat gggcttctga tactagcatg acaaactctc gcttatcata ggccagactc
    12181 ggaccatcaa aacttaacat gactaagcct aaagaggatc caataatact ggctgctgca
    12241 tagtcccagg gacacagata agaagcatag gcaaataatc ttccttccag aacgtgggcg
    12301 aaaccaatcc cagcgcttcc tacagatctt gtacctaaac ttttatttgc taattctgcc
    12361 actccatgtg cattgcctgc atacaacttt gcattgattc ctatcaaact ctggcgaaga
    12421 gggcgcaact ctggtttctt taagcgttct tgattgcaat aaacagggaa tgagtctcct
    12481 ccatggaaaa gtttgtctcg catgacatca taaatgatac caaactttcc tactccattt
    12541 tcaaaatagg caatcataat ggcaaaatca gttttctgag caataaaatt tgtggtgcca
    12601 tcaattggat caataaccca aacatttccc tcatgaatag aagaaacgtc tccaccttcc
    12661 tcacctaaaa tcccatcact ttgatagcga gattgaatct gttgagtcag catttcttgc
    12721 acttgtttat caaggtgcgt taccaagtct gtaaagtcaa ctttttcttc aatctgaaga
    12781 tcatcatgta aatgctgtcg gagaaaattt ccagcttcca ggacaatcgt ttgggcaaag
    12841 tgatacttag tttccaaaac gaataactcc tttcccttta tctcgagcag ccttaacaac
    12901 tcgataggtt gagtaaccag aaactgcttc aaagtcacga tcaatttgac gttcctgtcc
    12961 cttactttta acaacatctt tgaagctttt ataactagct aatatagcta ccgcatctgc
    13021 tcctttttca taagctgcct ccacctgatt caaaaaagaa agcacggagg aaatctcctc
    13081 tgtgctccac gaaaaatcaa gtggatatga ataatttttg ttcatatctg ttatctttct
    13141 tatcctattt ctgctctcaa tgtagcattt tttagttctt gtttgcgata cttccgcgga
    13201 agaaatgcac gaatttcatc ttcgttaaaa ccaatctgca tccgcttctc atccaaaata
    13261 atcggacgcc gtaagagact cggataggtt tcgattaacc caataagctg cttcacagaa
    13321 agctcatcaa catcaatatc tagcttctga aaaacttttg aacgggtaga aatcaagtca
    13381 tctgtcccat tttctgtcaa tgctaaaatg ttctttaatt cctcagcagt tagagggcta
    13441 gtcataatat tgtgctcaat aaaagggact tcgtgacttg tcagccaagc acgagcttta
    13501 cgacaactgg tacaactcgg tgacaaaaat aaagtaatca tgtcttccat cccctctaaa
    13561 aacatttttc ttcttatagt atactctaac ttaaaagagt tttcaatagt aaatctactc
    13621 tcttccctgt aatttttcca aagattctat ttttttctct aagcgtagca atatttcgtt
    13681 ttgttcatct atttttgcca tcaaggtatc caacttcgtt tcacgctctg tttcagagaa
    13741 aaaacgagtt attgtagagg taaccatacc aaaagtacaa ataccaacca acatcaagag
    13801 gatggctata attttagaaa tcgtatcttg ggggacaata tctccgtacc ctacagttgt
    13861 catcgttaca atggaccacc aaagtgcatc aaagaatgat ttcccttcaa tcactgatag
    13921 taagacactt gcaactagaa ccgctgagat atttaacatc aacactttgg ataaactgtt
    13981 ggtatgcaat agcttgttga ttgtatccca aaatcgatta gacagggcaa atattctcgt
    14041 tactttgact aatctgaaaa gtcgtgcaag tcttcccaag cgaagaaaac tgaagaataa
    14101 atcgaatgga ataatagcaa ttaattctaa gatatggccc tgtacatatt caagtatgtc
    14161 atccgcataa taaagctgag caaaataatc gcagacaaaa acaaaccata agagcaagtc
    14221 tagtacccga tacccactag aattagcaat attagcatcc atcaatgcaa gtacgataag
    14281 aaatacatag actacagcta tgtaggtcat agccttctca taaaaaggat gacgaatcaa
    14341 tcgtttaagc atatttctcc cattgcaagg caaattcctc atcagatttc atctgctcca
    14401 tcaaaccttc aatcccatca aatttaacca tatctcgaat tttttccaac caataaattg
    14461 tgattttttc tccgtagata aagcgatcaa atccaaaaat atgggcttca atccgcatct
    14521 ccgttccatc aaaggtcaca tttttcccaa cgcttgtcat agctcgatag cgttttccat
    14581 ctacttcgac atcagcgacg tagactccct ctgccggcaa atgtactcgg tcaaatggtg
    14641 ccagatttgc tgtaggatag ccaatagtgc gccctctggc atctccatgc accacaattc
    14701 cctccgtcat aaatggataa cctaaaagtt gattagctag agagacatcc cctgactgga
    14761 tagcctgacg aatgcgagtt gaagaaactt tctctccgcc caggctcact tcacttacaa
    14821 tttctacctg accatcaaat aactctgtca aatctttgac atctgctcta caatttccaa
    14881 aatgatagtc gaaacctgcc actaagactt gtgcgttcaa ccccttgatg tagcgttcta
    14941 aaaattgctc tggcgtgtta ctagcaaact cactggtaaa atctgtcaaa actagctgat
    15001 ctacaccgta ttgctccaac aagtggtaac gctgatcttg actggtcaaa tggagtaaaa
    15061 gttctggtga aaaacgcgca aaagccaggc gaggggactc tggaaaagta agtacagtta
    15121 ctgacaatcc tttttcatct gccacttgtc tagcacggtc taagagggcc ttatgcccca
    15181 aatgaatccc atcaaaatag cctaatacca aaacagtcgg ctcttcctga tggagttctt
    15241 gataattttt tatcgttcta atcttcatat tgtttatttt atcacaacta ggctaaaact
    15301 tcttctagaa aaaccttacg aggcttgtaa acttggtcac gtttttccag gatagccacc
    15361 agtttctcct tatgaaaacc tgccaacaat tccgcctgac tatctaaggt tataaaacga
    15421 ccaaatctgg catcaataac ttgctcaatc gtcaaatcaa caatcggcaa gtcaccaatt
    15481 ccttgttcaa tgggacgaag gaaggaaaaa tcttcttgcg acaccttctc agcaatctct
    15541 tcgattgtca gggcatcagc caggctcata ccagctgaac cagttcgttc caacttagac
    15601 atgtgactgg cgtagcctaa cttagcccct aagtcaacag aaagagtacg gacataggta
    15661 cctttaccac agcgaactcg aaaggtaaac cgtgcacagt catctgctcg ttcaatcggg
    15721 ctagtccgtt caaaactgta aatctcaatt tgacgttgag gacgctcaac ttcttcaccc
    15781 gctcgtgcgt attcgtagag tttgcggccc ttgaccttga cggcagagta cataggcgga
    15841 atctgggtaa tagtaccgac aaaactagcc atagcctcat caactgcctg ctctgctatg
    15901 tccaaaaccg gtgtacgctc gacgatatcg cccgacgcat cttcggtcgt ggtcgaatag
    15961 ccgagggtaa tctccccctc gtaaatcttg ccctcttcct gcatgtactc aatcatgcgc
    16021 gtggccttgc cgactgcaat gggcagaaca cctgtcacat ctggatccaa ggtcccaccg
    16081 tgaccaatct tcttctcctg caaaatcttg cggagcttaa agaccacatc gtgcgaggtc
    16141 atgcccgctt cttttttgac gttaataatt cctgaaatca tgttttcatt ataacataaa
    16201 ggaccgcact tgtgggcggt ccggtatgat ttagatatcc cgatgaaaat cgctatcaat
    16261 ctcaaaaaat ggttgaatat cctgaacata ctccaagacg ccttgaaact ctccttgatc
    16321 atcacgcacc gccttataga ccacatagac aaacttgccc atgctctcgg acttgaacca
    16381 catggtgacc tggtcttttt gtcctgtgcg gagcaagtca aaaatcttct tgaccttgtc
    16441 cactattttg ggaggatggc agagctccac atggcgtcca atctggctgg gcgttcgctt
    16501 gaaaatcatg tcttcgacag ggtggctgtc attataatat tggaaaatgt catcatgttc
    16561 attgctatct tcctagtaat ccatccaata tttcgatcaa tttttctttt tcctgactct
    16621 catttgtttt aaacctgatt agagggaggt cgcatttttt caaaatgtta tccttcataa
    16681 tatcacgttc aaactgctta gaattacctt tgtggaatgc atatccatct acttctacag
    16741 caagtacagg ggctttggta agtctattaa ttatcaaaaa atcaaggtgc gtatttccat
    16801 gccttgcata cttggcttcc acttctgtta gtcgagtaaa atccttcaca agattatgca
    16861 gtttatagtc atgtataaca tctaaactat tatatttttc atcgctcaca aacacttccc
    16921 taatccgatg atacattaaa ttctcagaat catatcgcga tatccgtttt cgttttctaa
    16981 aatattcctc cttttcttgc tcatactgtt tgtataagta atcgaagatg gaatatatag
    17041 ggctctctct tacttcaaaa ttattatatt gtatatatcc caataaatca ctaatatttt
    17101 tatctaacga ttgctcattc ccagtcatga caagaaataa tttattttta gctcttgata
    17161 tcgccacatt tagtaagtac ggatcatccg taaaacgtgt tatgctgtta tcaaccgtgg
    17221 agatgattat cgtatctttt tcttttccct gaaacttatg aactgtatca ctttccaaat
    17281 catcaatttg ctcttgcaac ttctctttct gctttcgata aggcgtgaca actcctgtcc
    17341 gctcccgata gatttcataa tttggaataa catctttcaa aattatatca atctctctct
    17401 gactatagtg atctcgagcg tgatttccct taggtgttct gatagcctga agaacatctt
    17461 tttccccatt atcacctgtc ataatcacta agtcaccatt ataaaacttt tgattacaga
    17521 aattgataat tttgggatga catctataat gctctcgtaa tagcgtttct ggaatattcg
    17581 gaatcacttt tagtaccgat tgaagaaaac tgtttgtgta ttcataacca ctatgaacac
    17641 cgtatttatg gaaaagctga gcactacttt ctttaacatc ttttgtgaca atatgcggta
    17701 gctgtttact atctccaaca actacaacat ttttagcaca ggataatgct agtgccccag
    17761 ttgtaatatc cacttgtgag gcttcatcta tgattaaata atcataggta atatcctttc
    17821 ctaaacttgt tgttgatgaa aatgttgtac taagaacaat aggatattct agaagaactc
    17881 gtttcgattg ttcccttaaa tcttcctttg taaactgtac tctatttctt tcattcccat
    17941 acttactaac tagaaaatct ttgaaaatct ttaatgaatc actggtcaaa ttgtttaaaa
    18001 cttccgtacc atttaagtga accaattctt cttgaagagt ttctaattta gtccttattt
    18061 ctgtttgttt atgctggtaa aataggttct gaaattgtat tgtcaaatca gacaattctt
    18121 gtttataaag ttcccagttt ttaacaccat ataataaaaa gttttttatc ttaaaaatta
    18181 aaccaaacct tttattcttt ttatagaatt cctcaaattc attccaaagc ttaaataact
    18241 tcttagaaga ataaaggttt aattctatag gcgatatatc tatgtgctca aaaaaatctt
    18301 tgaaatggcg aaattccgtt tctaattctg aaagttcttg tctcagattg gccagttctt
    18361 cctgaatttc aaaaatacga ggaagcctac gaatcttttc atttaattcc ttatcaaggc
    18421 tttccattcc attatctttt aatctccaag aagaaaaatc agggtacata ctatgctgat
    18481 tgagaataaa attattttta tttttttcac ttccaaggta agccacggga aagtcaagac
    18541 catagttctt tagtttttcg taaatattat caatggctgc attattatta gaaacaatta
    18601 gaaccgtctt attccgtatc actatattag ctataatatt cagaatcgtt tgtgtcttac
    18661 cagttccagg aggtccttga atgacactaa attgatttat taaggcattt tttgttgctt
    18721 tatattgact attattacaa ccaaaaggga aaatcagttc cccatgaaac ggcaagttat
    18781 tcttcttact gggacttaga tagctcgcta aagcaactgt tttgtctacg taatccaatt
    18841 cctcatacct ttttaacaag agcaattgat cagtcccaga gtttctcaga ggattcagct
    18901 tagatagttc cgtcaaataa ctaaaaacat gacgactatt caaatgtgtc aactcatttt
    18961 gccgtatttc taggtctctc cccatatata attttccagt gccatttttg tagcggatga
    19021 tataagcccg tgagtgcgtt ccattgaatt caaacattga ctcaatatta tttaataaaa
    19081 ccccatcttg ccttctataa actcctatct ctgaaggatt caactgtttg gaaaacttca
    19141 gcacctcaac tctctgcaca ttgtagcgat aaggttggac attattttta aaataaattt
    19201 caaagtagag cttccctttg taacgaatcg attgaagcga ctcgatattt tctgacttgt
    19261 cctctccatc aatcaaaatt atttttctat ctttcactat atctccactc tcactttcaa
    19321 tcttaatctt cctcctccct caacgcctca aacttggctt tcatggttgg gttattgcgg
    19381 gttagttttt tgacggagac gtcgtctagt ttattattgg ccagtcggag ctggttttca
    19441 ctggtggtca gggctgcctt gaccgcttcc attcgcttga ttgccttgtc gatttcatca
    19501 atagcctttt ggaaattgtt gctggccgat tgatagtttt tggcaaaagc attcttgaaa
    19561 atttccaaat cttcttcaaa atgagtaata tcgatattct gctccttaac caaggctaac
    19621 tcctgctgat attgcagact attgagcgca gcatttcgta aaattccgat taattggata
    19681 aagaactgtg gtcgaataac atacatcttc tcatattcat gactaacatc cacaatccct
    19741 gtattgtaat agtcattgtc cgcctctagc atgctgacta atacagcata ttcgcatttt
    19801 ttctcccgac ggtccttatc caactcctta aagaaatcag cgtttttatg cttggtcttg
    19861 gtcgtatctg cctcgttttt catttcgaac atgatggaaa taaattccaa gcccgactcg
    19921 tcaaaatcac ggaagatgaa atctcctttt gaaccggacg ctgatacttc gttgtccttc
    19981 gcaaatttgg cacgtggaaa agcataggaa cgaaccttgt taaactccgc ctcagcaaat
    20041 tgctccaagc tctctccaat tgccttagta gactgctggg ccttgaaatt tttgtaaaat
    20101 tccacctgct catccgccgc cttgagccgt acctcgtact cctgacgagt ggtcgccagg
    20161 gctaactctt gcttttgttc ctgcaaaacc aaagcatttt gtgccgcatc ccgctctttt
    20221 tccacctgag ctaccgcctg ctgcaactcc aagtccttgg caagaccgat ttgccccaac
    20281 tgagccttaa gctcttgaat ttcttggtct ttttgggaaa tagcagagct gatttccagt
    20341 tccgtctgac tagcaaattt atcaagtttt gcggtcagtt ccagaatctc cttatcctta
    20401 tcactcaatc tagcctgcaa atcattttca gccttctggc ttaataattc tcgttcccgc
    20461 tccaaacggt cgtggatttc cttgtcaaac tccgcaccac gcacctgggc taaaagctga
    20521 ctatattctg tttcattgac ctgaaaggcc gtcccacaat gggggcaagt aatttgatgc
    20581 atattctctc actttcttct tttcaaataa gatattaatt tatgtaaaac cgtagctact
    20641 cccagcgcca ataaaaaata aaagaaacga accgcatttc tagcatctgg aagtgataga
    20701 gcccaaagga caaaaatcgt tatggcagtc ggccatctcc agccccaggt catcttccgt
    20761 ttgataaacc attccatcca atcttcatta gaattaaatc gtgtttcata atattcttct
    20821 ttcagttgtt cccaccactt tttcataaca gcctcctttc aaatcacaga ccttctaatt
    20881 caagatccag aaaagtcttc cacttttcct gcaagggttg acgcacaggc ggctcctgac
    20941 cttctaagaa ttttttgata cattcatttt gcaccaacca tcctgtcatg tctttttgag
    21001 cattcgcaaa ttcattatca aaatcttctg gaattcgttc ttcaaaagta atcaaggtct
    21061 gattttctag ctgagacagt gtaaatgaaa ctgttgctga atcccacctg taggcaattt
    21121 tttcattttt tcggtattcc agtaaatcca taacttcacg gaatccttcc atttcaaaaa
    21181 ctagcttgtc accttcaacc ctcaactgcg gaaaccagtg ggcaaaacca ctatccgttg
    21241 ccaacaaatc ccaggactcc gccaaactag ccgacacaga atagcaaatg ctgagcaggt
    21301 agtgccccac ctccttcttt acactaatct tcatatcata ctcctattct atacttctat
    21361 tataccaaaa aacaccagtc tataaccgat gttccatata tatttataat ttttgaccac
    21421 caacaagcag cccattctca atttttatac cgtatttctt ctagcatttc aatcattcct
    21481 ttctcatttt atgctatact agatgtattg aaaacaagga ggtttatatg attaaactaa
    21541 tcgctcttga tatggacgga acccttttaa acgaaaaaaa agagctgatg caaccgcaaa
    21601 tcgatgccat tcatcaggct gttgaagcgg gcgtcaagat tgttctttgt actggtcggc
    21661 ccttggctgg tgttaaacct ttcgtagagc agctcggctt tgacactgag gaagaattta
    21721 tcattgtcaa taacggctgt tcaacccact caacaaagga ctggagcctg attgactggg
    21781 aagaactatc tagctctgat attgattatc tttccacctt tattgaaaat gatgatgtgc
    21841 aaatctctct ttttgatgag gaagactact tcgttcttgc agagaaagcc aatgcacgcg
    21901 ttaatttaga cgcaggtttg gtaggaatga ctcctcaacc aattgtttta aaagaagcca
    21961 agtcaggtca gcatcgcttc tttgaagcca tgttcgtcgg tgaaaaagag catatcgatg
    22021 cctttgaaaa tcaacacaat cctatactca gccaaggcta ttccaccgtt cgttcacagg
    22081 actatctgtt agaaatttta ccaaacggtg ccagcaaggc aactggtttg aaaaaactgg
    22141 cagaccgcct cggtatcctc ccagaagaaa tcatggctat gggagatgcc aacaacgacc
    22201 tggaaatgat tgaatttgct ggtttaggaa ttgccatggg caacgccaat gagcaggtca
    22261 aggctatcgc ccaggacatc acagacacca atgaaaacaa tggcgttgcc aaagccattg
    22321 aaaaacatat tttgaacaaa taaggagata ctatgaaata cccaacactc ttagaccgct
    22381 ttttagtcta tgtcaaagaa aacactcgct cagatgaaaa ttcgacaact acaccttcta
    22441 cccaaaacca agtcgaattt gcacagaata tccttctgcc tgaaatgaaa cgcatcggct
    22501 tacagaatgt ccactacctg ccaaatggct ttgctgtggg aacactgcct gccaacgacc
    22561 caagtttgac ccgtaagatt ggcttcatcg cccacatgga tacggctgat ttcaacgctg
    22621 aaggggtcaa tccgcaaatc atcgaaaact acgacggcaa cccaatcgct ttgggaactt
    22681 ctggctatga attgcatcca aaagacttcc cacaacttgc caactaccac ggtcaaaccc
    22741 tgattaccac agatggtacc accttgctag gctctgatga caagtcagga attgcagaaa
    22801 tcatgacagc tattgaattc ctagtccaaa accccgacat caaacactgt gaaatccgtg
    22861 tcggctttgg ccctgacgaa gaaatcggtg tcggtgctga caagtttgat gtggaagact
    22921 ttgatgtgga ctttgcctac actatggacg gtggcccgct gggcgaactc cagtacgaga
    22981 ccttctcagc agctggtgcc aagattgatt tcctaggacg caatgtccac ccaggctctg
    23041 ccaaggatca gatgatcaat gccttccaac tagctatcga cttccacaat gcccttccag
    23101 aaacagaccg ccctgagaaa acagaaggat atgaaggttt cttccacttg atgaacatgg
    23161 aaggtagtgt tgatactgct tctaccacct acatcatccg tgacttcgag gaagcagatt
    23221 tccaagcccg caaacagctt atgctggaca ttgctgagaa aatgaatgcc aagtttgaca
    23281 ctccacgtgt cattgtcaac ctacatgacc agtactacaa catgaagaaa atcatcgaaa
    23341 aagatatgac tccaatcaac atagcaaagg acgtcatgga aaatcttggt atcaagccac
    23401 tgattgagcc agttcgcgga ggaacagacg gctctaagat ttccttcatg ggcattccaa
    23461 cgccaaatat ctttgctggc ggtgaaaaca tgcatggccg cttcgagttc gtcagcttgg
    23521 aaaccatgga aaaagctgtt gatgtgattt taggtattgt agcatataaa taaacaattt
    23581 gttcagactt tcaattgaag gtctgatttt ttctgaaaat ctttcaaaat ttttgaaaaa
    23641 ctacttgtat tattgaacta atactgttat aatagaacca tcaaaaagaa atggagtttt
    23701 aatatgacag aagaaacatt agcacaggga attctcatcg gcatttgggg tacaacacta
    23761 ctattttcat ttatttggta tattcttgtt gctatttcca actacatcct cttcaaaaaa
    23821 gcaggctatg ctggttggaa atcattgatt ccaatctaca atctctatat ccaacaatgc
    23881 atcgcctttg gctatgaaaa aagatggttc attctattct tactgattcc actagcagga
    23941 ccattatatg gcatctatct cgtttacaat tttggtcgta gcttcggttt atcagctgta
    24001 caagctatct tctatgttct tcttacacct atctttaacc tctacatcgc ctttaatgat
    24061 ggaagtcgtt accaaggtcc acaagaattc tttattgatt aatatacaat caagcccccg
    24121 cacacgcgga ggctttttta aacgaataga aaaataagaa gaaccatcat gactaggctg
    24181 accaaaatag ataaggagtt aacattggca ggttcagctg atcgactccc taactttaat
    24241 gcataaattg gggacatgac tgaaatcgga gagactagac agaccagcaa catgattttc
    24301 atcgttttat caataggtag aagaaaataa atgactcctg ctattagaat attcgcaccc
    24361 agcctcaaag agagaagata ggccaatcga ctaatttctt tccaattcaa ttttaaatca
    24421 agcaagattc ccaacatgag catggctaaa aaaggattag cattactagc tatcgtcagc
    24481 gcagagataa gttcgcgtgg aagtttgata gagcagactg ctaacgatag gctaactaga
    24541 tagactacta gtggaactga gcgtgaaaga ttctttataa aagttgcaac ggtcattctt
    24601 tcctgctctt catccacacc agctgcgata ctgtaattcc cgcctagaac catgattgca
    24661 ttccccgcat caaatacgat gacgcttagg agactagata gcggaaaaaa agcttgcaca
    24721 aatgggagtg taaaggttcc gatattatag cctgataact gcataagacc gacggaagtc
    24781 tgttgaccag acttctttgc ttcccagtat cccaccatat ccaaaaaaag attacaaaga
    24841 atccctaata tgaagggaac gtataaatct atagatactt gggctgtcgc tgaagctaca
    24901 aggagagaag ctggtagcgt aatattcatc actaagctag aaaagattct tgcatcttcc
    24961 cttcgaacaa tccctttgac ttttaatgta taacctaaac cgataacaaa gataaaaccg
    25021 agagcacggg ctaataattc aagttcattc acgaaactag tatagcatat aga
//
LOCUS       DASFQS010000022        24997 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.022, whole genome shotgun sequence.
ACCESSION   DASFQS010000022 DASFQS010000000
VERSION     DASFQS010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 24997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24997
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.022"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..177)
                     /locus_tag="U1041_000792"
     CDS             complement(<1..177)
                     /locus_tag="U1041_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767915.1"
                     /translation="MSIYDFTVQKQDGTDQSMAEYQGQVLLIVNTAPGCGLAPQYKEL
                     QGEWERTRLSQKEFV"
     gene            complement(191..907)
                     /locus_tag="U1041_000793"
     CDS             complement(191..907)
                     /locus_tag="U1041_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM4767916.1"
                     /translation="MRLDKCLEKAKVGSRKQVKKLFKAQQIKINGRPAQSLSQIVDPE
                     LQTIQVSGKKVALEGSAYYLLHKPAGIVSAVTDQEHQTVIDLISPQDSREGLYPVGRL
                     DRDTEGLVLITNNGPLGYRMLHPSHHVDKVYYVEVNGCLAEDASKFFASGVTFLDGTR
                     CQPADLTTLEASLDHSRATIKLAEGKFHQVKKMFLAYGVKVTYLKRISFGGFELGDLE
                     RGAYRQLTPNEMEHLFTYFD"
     gene            1046..2002
                     /locus_tag="U1041_000794"
     CDS             1046..2002
                     /locus_tag="U1041_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000523788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEM4767917.1"
                     /translation="MGLLQDGKWVDQWYDTKSTGGKFVRTITQFRNWITPDGQAGPTG
                     EGGFKAESGRYHLYISLACPWASRTLIMRKLKGLEDHISLSVVHPLMLENGWTFADGP
                     GVIKDTLFNSDYLYQVYLKANPAYSGRVTVPVLWDKETNTIVSNESAEIMRMFNSAFN
                     DITGNYDDYYPANLQAEIDAMNDFIYPNINNGVYKAGFSTNQKVYEKEVNNLFAALDK
                     LEEHLADKDYLVGNQLTEADIRLFTTLVRFDPVYFGHFKCNIKALVDYPNLWDYTKRI
                     YNHSGIAETVDFDHIKQHYYGSHKTINPTGIVPVGPDLDWTL"
     gene            2075..3190
                     /locus_tag="U1041_000795"
                     /pseudo
     CDS             2075..3190
                     /locus_tag="U1041_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922179.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
     gene            complement(3280..4545)
                     /gene="dltD"
                     /locus_tag="U1041_000796"
     CDS             complement(3280..4545)
                     /gene="dltD"
                     /locus_tag="U1041_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HEM4767918.1"
                     /translation="MRKQLWQIFGPVICATFLVILTLLFFPSSSRSNFKEEKQDAVAL
                     SYISFKSKYKKNRALGDKNHRFVPFFGSSEWSRFDSMHPSVLADAYQREYTPYLLGQR
                     GAASLTQYFGMQQIGAHLKNSQAIYVVSPQWFSPKGASSKAFEQYFSSDQATHFLQTS
                     AEDDYDRYAAKRFLELKSDCSLTGMFQKVASGKELSKWDREQLTWQAYLLEKQDALFS
                     RFADSGSNLGLVETEAMKLPEPFSYDRLSKVANEDGSRSTRSNDFQIDDRFYRNRLQS
                     KIKKLKQSQTKISYLQSPEYNDFQLVLNEFAKHQTDVLFVIPPVNERWMNYTGLNKDM
                     YRATVAKIKYQLTSQGFNHIADLSEQGGIDYFMQDTIHIGWQGWLELDKYIHPFLTEQ
                     QAPVHYQLKKEFLTSEWAAYKGDLNLFLK"
     gene            complement(4538..4777)
                     /gene="dltC"
                     /locus_tag="U1041_000797"
     CDS             complement(4538..4777)
                     /gene="dltC"
                     /locus_tag="U1041_000797"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltC"
                     /protein_id="HEM4767919.1"
                     /translation="MDVKETILNIIEELFMEDVSEMMDEDLFDAGVLDSMGTVELIVE
                     LESRFNITVPVSEFGREDWNTANKIISGVVELMHA"
     gene            complement(4820..6061)
                     /gene="dltB"
                     /locus_tag="U1041_000798"
     CDS             complement(4820..6061)
                     /gene="dltB"
                     /locus_tag="U1041_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltB"
                     /protein_id="HEM4767920.1"
                     /translation="MMEFFKQLPQLEPYGNPLYFFYLVLALVPIFIGLLFKKRFPLYE
                     TGVSLAFIVLMFTGTKTIQLLSLLAYIIWQTMLIFFYKHYRQRANQSWVFYLIVCLAV
                     FPLTWVKLAPTFSQHGAIFGFLGISYLTFRSVGMVIEMRDGLLTEFSLGSFLRFLLFM
                     PTISSGPIDRYRRFTEDYKQIPERTELLNMLDQTVHYIMMGFLYKFILAYFIGHTLLE
                     PLKAVALDQGGWFNLPTIGVMYLYGFELFFDFAGYSMFAIGISNLMGIRCPINFDQPF
                     KSRDLKEFWNRWHISLSFWFRDFVFMRLVKTLLKHKVFKNRNTVSNVAYLLNMLLMGL
                     WHGVTWYYIAYGLFHALGLIINDAWIRKRKSINLARKKAGQEPLLDNRWTSFAGMFVT
                     FHTVMFSFLIFSGFLDKLWFK"
     gene            complement(6058..7620)
                     /gene="dltA"
                     /locus_tag="U1041_000799"
     CDS             complement(6058..7620)
                     /gene="dltA"
                     /locus_tag="U1041_000799"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HEM4767921.1"
                     /translation="MSFKEESIKKISSMLERVEHFATENPDYPVYHYLGQLYSYGDLK
                     ADSDSLAAHIDSLDLPANSPVLVFGGQEYQMLAIFVALTKAGHPYIPVDSHSALDRIE
                     AILEIAEPSLVFAVADFPLETSLPVLGLSEVEAIFEKKSTYQLMHPVSGDDTYYIIFT
                     SGTTGKPKGVQISHDNLLSFTNWMIMDKEFALPERPQMLAQPSYSFDLSVMYWAPTLA
                     LGGTLFALPKELTLDFKTLFAAIQTLPFKIWTSTPSFVDMALLSREFDGKHLPNLTHF
                     YFDGEELTVKTAQKLRERFPKAVIVNAYGPTEATVALSAVAITNEMLVNYKRLPIGYT
                     KPDSPTFILDEDGQVVPNGQQGEIVVSGPAVSKGYLNNPERTEAAFFQFDGLQAYHTG
                     DLGVMTDEGLLLYGGRMDFQIKYNGYRIELEEVAQHLNKSTYIEAAVAVPRYNADHKV
                     QNLLAYVVPKAGIMEQFDRELELTKVIKQELKERMMDYMMPSKFIYRDSLPLTANGKI
                     DIKGLIAEVNAQ"
     gene            complement(7610..7735)
                     /gene="dltX"
                     /locus_tag="U1041_000800"
     CDS             complement(7610..7735)
                     /gene="dltX"
                     /locus_tag="U1041_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala incorporation-associated
                     protein DltX"
                     /protein_id="HEM4767922.1"
                     /translation="MQHPVVRFICRTLFYFFILLLLLYLYSYLDIGQGGFIYNEF"
     gene            complement(7936..8763)
                     /locus_tag="U1041_000801"
     CDS             complement(7936..8763)
                     /locus_tag="U1041_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
                     /protein_id="HEM4767923.1"
                     /translation="MQWNVHQLSQICHHFYQNYCPDSFKHRRNVGLAKVSDESLLVLL
                     LLQAELGITSQRHFYSICHLFPCSQLLERSRFNRRSKQLIWLVQFIRKAMSDMLPSDK
                     LAIIDSFPLPLYQTVRNHRVAIFKGLADIGYKASKHLWFYGFKVHMLVTLSGYILNYV
                     VTPASVHDIKVVYELLEGCKQSVILGDLGYLSSELKKDLEQEGYHLWTPFRQNMAGAE
                     EHNNWKVMAMRRTIETRFSELCRLFGIEQILARGLAGLQLRIEQIILAHNLRYFEMN"
     gene            8927..9484
                     /locus_tag="U1041_000802"
     CDS             8927..9484
                     /locus_tag="U1041_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HEM4767924.1"
                     /translation="MNFPHIVERCQLITIITFGETVIAILKNYPIQTHLLTGVLFFLA
                     MAFSFMFYISQTYLNINHHQKTNVATLLYAHMVLVLGINFFTVAVEVLPGEHASLGLP
                     FLLIGYFLYFMGILMTSRYNQDLYRLDKSVRFQYALTLFITIILLVVSQNHLLLIATI
                     LAVSSYMIVRITHRHRTSVRESLEE"
     gene            complement(9525..10232)
                     /locus_tag="U1041_000803"
     CDS             complement(9525..10232)
                     /locus_tag="U1041_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003051540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM4767925.1"
                     /translation="MKIHVVNNQVEGATVALDILREKLNGGAKVLGLATGSSPLEFYR
                     LIRESDLDFSDATSVNLDEYVGLGEESDQSYIHFMKENLFNDKPFKKSYLPNGLATDV
                     VAETERYNKILAEHPVDFQILGIGRNGHIGFNEPGAPFDGQTHLVELAPSTIEANARF
                     FDNPEDVPKQAISMGIANIMAAKTIVLMAYGQEKADAIKATVEGAVTEDVPASVLQNH
                     DNVILILDQAAASKLKK"
     gene            10580..11608
                     /gene="queA"
                     /locus_tag="U1041_000804"
     CDS             10580..11608
                     /gene="queA"
                     /locus_tag="U1041_000804"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEM4767926.1"
                     /translation="MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQSMVDSHFD
                     HIIDQLNPGDALVMNNTRVLPARLYGYKPETMGHVELLLLKNTQGDQWEVLAKPAKRL
                     KVGTTVAFGDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESLGEMPLPPYIHEKLED
                     RERYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDN
                     VDEHEMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLEADSG
                     WTNIFIKPGYTFRIVNAFSTNFHLPKSTLVMLVSAFASREFTLDAYKHAVEERYRFFS
                     FGDAMFIQ"
     gene            11672..12145
                     /locus_tag="U1041_000805"
     CDS             11672..12145
                     /locus_tag="U1041_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEM4767927.1"
                     /translation="MNKIESRHQLILSLIMEKKIHTQQELQELLEVNGVSVTQSTLSR
                     DIKMLNLVKVNEDDSSHYIINPIAPTRWEKRLRLYMEDALVMLKPIQHQVVLKTLPGL
                     ANSFGSILDAMEIPQIVATVCGDDVCLIICEDVEGAQACFEHLKQFTPPFFFSKL"
     gene            complement(12471..13811)
                     /locus_tag="U1041_000806"
     CDS             complement(12471..13811)
                     /locus_tag="U1041_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEM4767928.1"
                     /translation="METSFIQAQHQAACVEAIKELVAFPSVLQEHQADTPFGQAIQDV
                     LEHTLALTEKMGFKTYLDPAGYYGYAEIGQGEELLAILCHLDVVPAGDLSQWQTPPFE
                     AVVEGDYIIGRGVQDDKGPSMAALFAVKALLDVGVQFNKRIRFIFGTDEETLWRCMNR
                     YNQLEEVATMGFAPDSSFPLTYAEKGLLQVKLHGPGHPCLSIEAGTAYNVVPAKASYS
                     GHLLAGVIAELDQLGFDYETKDDQVTVLGISRHAKDAAEGVNAIVHLAKALEHFESHP
                     ALDFIVNAVGEDATGFKLFGDVTDEPSGTLSFNIAGLTISAKKSEIRLDIRIPVTADK
                     EALVSTLQAKAQSCGLTYEEYDYLASLYVPLDSQLVSTLMSVYQDKTGDLTSEPISSG
                     GATFARTMPNCVAFGACFPDTEQTEHQENERMPLEDLYKTMDIYAEAVYRLAAE"
     gene            complement(13927..15429)
                     /locus_tag="U1041_000807"
     CDS             complement(13927..15429)
                     /locus_tag="U1041_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcC family protein"
                     /protein_id="HEM4767929.1"
                     /translation="MSEKVKKGFKLPSSYTILMLIIAFMAVMTWIIPAGQYQVDEAGH
                     LVAGTYEKVAQNPQGIYDVFMAPVRAMLGHGATEAAINVAFFIIMVGAFLGVVNETGA
                     LDVGIASIVKRFKGREKMLIYILMPLFALGGSTYGMGEETMAFFPLLVPVMMAVGFDS
                     ITGVAIILLGSQIGCLASTVNPFATVVASDAAGVSVADGMIWRLVFFVVILLMGVLFV
                     ANYAEKVKNDPTKSLVYKQREADMQHFNVAATQEVNAELSPAQKRVLWVFVLTFVLMI
                     CSFIPWEDLGVTIFTQFNDWLIGLPFIGQVIGSSTAALGTWYFPEGAMLFGIAGIVVG
                     LVYGMSEERLVKSFMFGAADIFSVALICAIARGIQVIMNDGMITATILHMGEEGLQGL
                     SSQVFIILTYLFYLPMSFLIPSSSGLAGASMGIMAPLGEFVNVPASLVITAFQAASGL
                     LNLVAPTSGIVMGALALGRVEIGTWYKFVGKLIAAIVLASIAILVIATFF"
     gene            complement(15919..16866)
                     /gene="arcC"
                     /locus_tag="U1041_000808"
     CDS             complement(15919..16866)
                     /gene="arcC"
                     /locus_tag="U1041_000808"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003025409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HEM4767930.1"
                     /translation="MANRKIVVALGGNAILSSDPSAKAQKEALVQTAKHLVKLIKNGD
                     DLIITHGNGPQVGNLLLQNLAADSEKNPAFPLDSLVAMTEGSIGFWLQNALENELLKE
                     GIEKDVASIVTQVIVDKNDPAFENLTKPIGPFYTEEEAKAEAEKTGATFKEDAGRGWR
                     KVVASPKPVGIKEIGTIRTLLNAGEVVVAAGGGGIPVVQEADGTLTGVEAVIDKDFAS
                     QCLAELVDADLFIVLTGVDYVFVNYNKPDQEKLETVTVAELEEYIKQNQFVPGSMLPK
                     VEAAIAFVNNKPQSKAVITSLENLGALIESDSGTIIVKG"
     gene            complement(16984..17997)
                     /gene="argF"
                     /locus_tag="U1041_000809"
     CDS             complement(16984..17997)
                     /gene="argF"
                     /locus_tag="U1041_000809"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEM4767931.1"
                     /translation="MTNVFKGRHFLAEKDFTRAELEWLIDFSAHLKDLKKRNIPHRYL
                     EGKNIALLFEKTSTRTRAAFTVASIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMF
                     DGIEFRGFSQKMVEELAEFSGVPVWNGLTDAWHPTQMLADYLTVKENFGKLEGLTLVY
                     CGDGRNNVANSLLVTGAILGVNVHIFSPKELFPDETVVALAEGFAKESGARVLITDNA
                     DEAVKGADVLYTDVWVSMGEEDKFAERVALLKPYQVNMELVKKAENENLIFLHCLPAF
                     HDTNTVYGKDVAEKFGVEEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGDPFV
                     PRV"
     gene            complement(18016..18456)
                     /locus_tag="U1041_000810"
     CDS             complement(18016..18456)
                     /locus_tag="U1041_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4767932.1"
                     /translation="MPSIERTTIGSEEWQRAASIYVRYKVFVLERGIAKEDEFDQNDT
                     EGRVYANLFIGEEPVSTGRFLPVGPGQARLTRIATLPNFRGKGYGKMIISSLEAYARE
                     AGFHQLNIHSELTAKTFYESVGYQATSEVYQEDGEWCQTLTKFI"
     gene            complement(18456..19688)
                     /gene="arcA"
                     /locus_tag="U1041_000811"
     CDS             complement(18456..19688)
                     /gene="arcA"
                     /locus_tag="U1041_000811"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012560827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HEM4767933.1"
                     /translation="MMSNHPIHVFSEIGKLKKVMLHRPGKEIENLMPDYLERLLFDDI
                     PFLEDAQREHDAFAQALRDEGVEVLYLEKLAAESLVTPEIREQFIDEYLEEANIRGRA
                     TKKAIRKLLMSIEDNQELVEKTMAGVQKAELPEIPSEEKGLTDLVESSYPFAIDPMPN
                     LYFTRDPFATIGNAVSLNHMYSETRNRETLYGKYIFTHHPEYGGKVPLVYNREATTRI
                     EGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFEQHVGFKKVLAFEFANNRKFMHLD
                     TVFTMVDYDKFTIHPEIEGDLRVFSVTYENDTLHIEEEHGDLAELLAANLGLEKVELI
                     RCGGGDMVAAGREQWNDGSNTLTIAPGVVVVYKRNTITNAILESKGLRLIKIGGSELV
                     RGRGGPRCMSMPFEREDI"
     gene            complement(19946..20641)
                     /locus_tag="U1041_000812"
     CDS             complement(19946..20641)
                     /locus_tag="U1041_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM4767934.1"
                     /translation="MISNEQYDYLRAHPTFERLTRDNFDQLAKHIRFRKIPKGQIFFY
                     AEDPRDYLFVLYKGYARIEQYDETDSFTYLDYIRQGGAFPFGDMFQDKPYHYTAIAIT
                     DLEYFIVPMVLFETLSKINPSQMTYICQKLSKVLRFQELRLRNAMRSKASDRVVQALA
                     LLYWDMCQREQFATLPFEIHIQEISRLAATTRETVSYVLKQLKQDGKIAYSHKQLTYL
                     DIDYFLENLTETH"
     gene            complement(20925..21842)
                     /gene="whiA"
                     /locus_tag="U1041_000813"
     CDS             complement(20925..21842)
                     /gene="whiA"
                     /locus_tag="U1041_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HEM4767935.1"
                     /translation="MSFTVQVKEELLLQSSSNKSELSAIIKLSGSLGLASSGLTLSIS
                     TENAKIARHIYELLLHFYQIKAEIRHHQKPNLKKNRVYAVLIEDGVNEILNDLHLADS
                     FFGLETGISPLVLENDSWSQAYLRGAFLAAGSVKDPEKGKYQLEIASVYSDHANDLAN
                     LMQKFLLDAKVIERSKGTITYLQRAEDIMDFLLVIGAEETKTEFENVKLLREARNDLN
                     RATNAEAANIAKTVNASMKTINNIIKIMDTIGLDQLSGDLQEIAQLRIQHPDYSIQQL
                     ADSLTVPITKSGVNHRLRKINKIADELTD"
     gene            complement(21839..22813)
                     /locus_tag="U1041_000814"
     CDS             complement(21839..22813)
                     /locus_tag="U1041_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HEM4767936.1"
                     /translation="MRKPKITVIGGGTGIPVILKSLRDKDVEITAIVTVADDGGSSGE
                     IRQALQVTPPGDLRNVLLAMSDMPKLYEQIFQYRFADSDGPLAGHPLGNLIIAGISEM
                     QGSTYNAMRLLTRFFHTTGRIYPSSEQALTLHAIFTDGTEVAGESKISKHNGMIDHVY
                     VTNSYNNDEPKASRQVVETIMESDMIVLGPGSLFTSILPNLMISDIGKALKETKAEVT
                     YVCNIMTQRGETEFFSDADHVAVLNAHLAEQFIDTVLVNIEPVPQEYMNSNQFDEYLV
                     QVKHDFAGLQKQANRVISSNFLRLENGGAFHDGDLVVEELLKILQVRP"
     gene            complement(22810..23697)
                     /gene="rapZ"
                     /locus_tag="U1041_000815"
     CDS             complement(22810..23697)
                     /gene="rapZ"
                     /locus_tag="U1041_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEM4767937.1"
                     /translation="MSDKLHLVIVTGMSGAGKTVAIQSFEDLGYFTIDNMPPTLLPKF
                     LELIRHSQDNNKIALVVDMRSRSFFSEIREVLDEIEGAEDLDFKVLFLDATDSELVAR
                     YKETRRSHPLAADGRVLDGIQLERELLAPLKNMSQNVIDTTELTPRNLRMAISEQFAS
                     QDNQPSFRVEVMSFGFKYGLPLDADLVFDVRFLPNPYYQKELRNLTGLDAPVFDYVMD
                     HQESEEFYSHLIGLIEPILPGYQKEGKSVLTIAVGCTGGQHRSVAFAKRLADDLEKNW
                     NVNRSHRDKDRRKETVNRS"
     gene            complement(23719..24096)
                     /locus_tag="U1041_000816"
     CDS             complement(23719..24096)
                     /locus_tag="U1041_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEM4767938.1"
                     /translation="MKTIHTDKAPAAIGPYVQGKVVGNFLFASGQVPLSPETGEIVGE
                     TIQEQTEQVLKNIAAILEAAGTDFDHVVKTTCFLKDMNDFVAFNEVYKTAFSADFPAR
                     SAVEVARLPRDVKVEIEVIAVID"
     gene            complement(24147..>24997)
                     /locus_tag="U1041_000817"
     CDS             complement(24147..>24997)
                     /locus_tag="U1041_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4767939.1"
                     /translation="TPMKMSLLTNGFNVVLDYFLIFGLGSWSGLGIVGTALGTILARL
                     LGTVLLYRKVQQTDVAVDLKQLFRLGSPKEMVVLTLPAAAERLVMRLGQVVYFSLIVG
                     LGTTVYASHMIAGNIESFTYMPAYGLATAAAVLIGQALGKGDILTVRRVAFLSSAYGV
                     AIMFLLGTILFFGAPSFALLFTKDLEAVRQVVTALRIDAFNQPGLAVSLIMAGALQGL
                     GDTKSPLYSTMIGMWGLRVLGVVVLGQMFGLGIAGVWLVILIDLLLRAIFLTWRFIVQ
                     TRKLAD"
BASE COUNT         7456 a         5653 c         4565 g         7323 t
ORIGIN      
        1 gacgaactct ttttgactta gtcgagttct ttcccactcc ccctgtagtt ccttgtattg
       61 gggtgccaat ccacaacctg gcgctgtatt gactataagt aaaacttgtc cttgatactc
      121 agccatggac tggtctgtgc catcttgttt ttgtactgta aaatcataaa tgctcattat
      181 atatcctcct ctagtcaaaa taagtgaata aatgttccat ttcatttggt gtgagttgtc
      241 tgtatgcacc tcgttccaaa tcccccagtt caaaaccacc aaaggaaatc cgcttgagat
      301 atgtgacctt gacaccatag gctaaaaaca tctttttgac ctgatgaaac ttaccttctg
      361 ccagcttgat ggtcgctctg ctatggtcca aagaagcctc caaagtagtt aaatctgcag
      421 gctgacaccg tgttccatcc aagaaagtaa cacctgaagc aaaaaatttt gaagcatcct
      481 cagccaagca tccatttacc tccacatagt agaccttgtc cacatggtgg ctgggatgga
      541 gcatgcgata accgagcgga ccattgttgg taatgaggac taggccttcg gtatccctgt
      601 ccaggcgacc gactgggtag agaccttccc tactgtcttg cggagaaatc aagtcgatga
      661 ctgtctgatg ctcctggtct gtcactgcag aaacgatacc tgctggttta tgaagcaaat
      721 aataggcgga accttctaag gcaacttttt tacccgaaac ttggatagtt tgtaactctg
      781 ggtcaacaat ctggcttagg ctttgagcag gtcgtccgtt aatcttgatt tgctgggctt
      841 tgaaaagttt ttttacttgc ttacgcgagc caactttggc tttctctaaa catttgtcca
      901 atctcatggg actattgtat cacaaatcat atagcttgac tctttttgaa aaaagtttat
      961 aatactagtt agtgatatat ttttttacaa aggaaatcca atcatcctat tggatttccc
     1021 atttcttcag taagggagaa aattcatggg acttttacaa gatggcaaat gggtggatca
     1081 atggtatgac accaagtcaa caggcggtaa atttgtccgt actatcacac aatttcgcaa
     1141 ctggattacg ccagacggac aggcaggtcc gacaggagag ggcggtttca aggctgagtc
     1201 tggtcgctac catctctata tttctctggc ttgtccttgg gctagtcgga ccttaatcat
     1261 gcgaaaattg aagggtctgg aagaccatat ttccttgtct gtcgttcatc ccctcatgtt
     1321 agaaaatggt tggacctttg cggacggacc tggtgttata aaggataccc tctttaacag
     1381 cgattatctc tatcaggtct atttgaaggc taacccagct tactctggtc gggtgacggt
     1441 gcctgtactt tgggacaaag aaaccaatac cattgtcagc aatgaatcgg ctgaaatcat
     1501 gcgcatgttt aactctgctt ttaatgatat tactggaaat tacgatgact attatccagc
     1561 aaacctgcaa gccgagattg atgccatgaa cgactttatc tatccaaaca tcaacaacgg
     1621 agtctacaag gctggatttt caaccaatca gaaagtctat gagaaagaag tcaacaacct
     1681 ctttgctgcc ttagataaat tggaagagca tttggcagat aaggactatc tggttggcaa
     1741 ccagctgaca gaggctgata ttcgactctt taccactttg gtacgattcg atcctgttta
     1801 ctttgggcat ttcaaatgca atatcaaggc cttggttgat tatccaaact tgtgggatta
     1861 taccaagcgg atttacaacc actctggtat tgcggagacg gttgactttg accatatcaa
     1921 acagcactac tacggtagcc acaaaaccat taacccaaca ggtattgtcc cagtcggacc
     1981 agacttggac tggacgctct aacagacaag gggagatgac agtctccctt ttcgtatggt
     2041 ataatagttc agattttttg aaaaggggac ttccatgtct gaaattatcg caaaacgcgt
     2101 atccaactat gaattgtttt aggacttggt ctttgtatta gctacctctt cactgactgg
     2161 cctcttacac ggggaccata tcggactcag ggaaattcta acttttatca ccgctaacct
     2221 gataattatg accttgtgga ttaatgagac gatttacctc aacaaatatg gtgaacggga
     2281 tttgttggat attatcacga ttattgcgtc catgtttgtg gtggggcaat tatccctaaa
     2341 ctttagtcat gattttgaag caacagccct gccctttact atctttttga ccctgtctta
     2401 tttgctactt tgcttgcagt actaccttcg ggggcgaaaa atcggtttta cggcagatat
     2461 aaaaaatagt ctctatatgt ttgggattta tttgctggta tttttcttgg ctttggtagc
     2521 tatttacttc aatttctgga cctatgatga aaagagcctc ttgctttttt atcttccatt
     2581 tttcatttcc tattttttca aagacaaact cagccatgat gtgatgaact ttcctcatat
     2641 cgtagaacgc tgccagctga ttactattat cacctttggt gaaacagtca ttgcgatttt
     2701 gaaaaattat ccgattctag aacttccttt ggaaggaatc ctcctcttct tcgcaatggc
     2761 gactctgttc atcttctata tttctcagac ctatctcact atcgaccatc accgcaaggc
     2821 agatgcgact gttctgctat acgctcactt ggtgattgtt cttggcttga atttcttcac
     2881 agtggcaatg gaacttttcc ctagtcatca taatgatttg gccttgccca tgctgattgt
     2941 aggaaacctt ctcttctata gtggtatcct ttcgacctcc ttctataatc aacaagtcca
     3001 tcaagttggc aggagagggc tgttcatcta tgctctcatt ttactaattg gaaatgttgc
     3061 cttattgctg gatgggcatt caaatatcct actatttgtt atcttaaacc tgctctcaca
     3121 cgctatggtt gcctatcatg ttattcgctt ccgcaaagcc aaccacagtt tgttgggaga
     3181 agatatataa tcattcagtt tattacagta aaagaaccaa aaaagcaagg agacttccta
     3241 attcaaagcc ttcttgcttt ttattataac tgtatctaac tattttaaaa ataagtttaa
     3301 atctccctta tatgcagccc attcagaagt taaaaattct ttttttaact gataatgaac
     3361 aggtgcttgt tgttctgtca agaatgggtg gatatactta tcaagctcca gccagccttg
     3421 ccaaccgatg tggattgtat cttgcataaa ataatctatc cccccctgct ccgacaaatc
     3481 agcaatatga ttgaaacctt gactggtcaa ctggtactta atctttgcta ctgttgcccg
     3541 atacatatct ttattgagac cagtgtaatt catccaacgt tcattaactg ggggaattac
     3601 aaatagcaca tcagtctgat gtttagcaaa ttcattcaaa accagctgaa aatcattgta
     3661 ctccggtgat tgcagataag atatttttgt ctgggattgt ttgagttttt tgatttttga
     3721 ctgaagacga tttctataaa acctatcatc aatttggaaa tcatttgatc gagtagaacg
     3781 actcccgtcc tcattagcca ctttactcaa gcggtcatag gaaaaaggct ctggaagttt
     3841 catcgcttcc gtttctacca atcctaaatt actaccagaa tcagcaaagc gactaaataa
     3901 ggcatcttgc ttttctaata aataggcttg ccaggtcaac tgctctctat cccatttcga
     3961 caattcctta ccactagcta ctttttgaaa cattcctgtc aaactacagt ctgatttaag
     4021 ctctaagaaa cgctttgctg catatctatc atagtcatcc tcagcacttg tttgcagaaa
     4081 atgagtggct tgatcactac taaaatattg ttcaaatgcc ttagatgatg cccctttggg
     4141 tgaaaaccat tgaggagaaa caacatagat agcctgacta ttttttaaat gtgccccaat
     4201 ctgttgcatg ccaaaatatt gtgtcagcga agctgcacca cgttgtccta acaaataggg
     4261 agtatactct ctctgatagg catctgccaa cactgacgga tgcatactat caaaacgtga
     4321 ccattcactt gacccaaaga aaggaacaaa gcgatgattt ttgtctccca gagctctatt
     4381 tttcttatat ttgctcttaa aactaatata agacaatgct actgcatctt gtttttcttc
     4441 tttgaaattt gaccgagaag aactcgggaa aaacaacaag gtgagaataa ctaaaaacgt
     4501 tgcacaaatc acaggcccaa aaatctgcca caattgctta cgcatgcatc aactccacaa
     4561 caccagaaat gattttgtta gctgtattcc aatcttcacg accaaactct gaaactggaa
     4621 ctgtaatatt aaaacgactt tctaactcca caataagttc tacggtcccc atactatcca
     4681 aaacacccgc atcaaatagg tcttcatcca tcatttcaga tacatcttcc ataaataatt
     4741 cttcgataat attcaatatt gtttctttta catccatttt atactccttt ctacgattca
     4801 tacaatcgtt acctattgtc tacttgaacc acaatttatc taaaaatcct gaaaatatca
     4861 agaaagagaa catgaccgta tggaaggtca caaacatacc agcgaaactc gtccaacgat
     4921 tatccagcag tggttcttgc ccagcttttt ttcgagctaa attaattgat ttcctcttac
     4981 gaatccaagc gtcattgatg atcaacccca aagcatgaaa gagaccatat gcaatataat
     5041 accatgttac accatgccac aagcccatca agagcatatt taacagatag gcaacattag
     5101 ataccgtatt tcgatttttg aaaaccttat gtttcaacaa agtcttaaca agacgcatga
     5161 agacgaaatc acggaaccaa aaagataagc tgatatgcca gcgattccaa aattccttaa
     5221 gatcacgcga tttgaacggt tgatcaaagt taattgggca gcgaataccc ataagattgg
     5281 aaatacctat ggcaaacatg gaatagcctg caaagtcaaa gaataattca aaaccataga
     5341 gatacataac tccaatagta ggtaagttaa accatccacc ttgatccaaa gctactgcct
     5401 ttaaaggctc cagtaaagta tgcccgataa aataggctag aataaactta tataagaagc
     5461 ccatcataat ataatgcaca gtctgatcga gcatatttaa taactcagtt cgctcaggaa
     5521 tttgtttgta atcttccgta aaccgtctat aacgatcaat aggaccactc gaaatagttg
     5581 gcataaataa caaaaatcgt aaaaaactcc ctaaactaaa ttccgttagt aaaccgtccc
     5641 gcatttcaat caccattccg accgaccgaa acgttaaata agaaatacct aaaaaaccga
     5701 aaattgcccc atgctgacta aaagtcgggg ccaactttac ccaagtcaac ggaaaaacag
     5761 ctaaacacac gattaaatag aagacccagc tttgatttgc ccgttgacga taatgcttgt
     5821 agaaaaaaat caacattgtc tgccaaatga tataggccaa taaagatagc aactgtattg
     5881 tctttgtacc tgtaaacatc aagacaatga aggctaaact aacacctgtt tcatacaagg
     5941 ggaaacgttt tttaaaaagg agtcctataa aaattggtac tagcgccaag actagataga
     6001 aaaagtacaa tggattccca taaggctcta actgaggtag ctgtttgaaa aactccatca
     6061 ttgagcattc acctcagcga tcaatccctt aatatcaatc ttcccatttg cagtcaaagg
     6121 aagactgtct cgataaataa acttcgaagg catcatataa tccatcatcc gttcttttaa
     6181 ctcctgcttg atgaccttgg ttaactccaa ctctcgatcg aactgctcca taatccctgc
     6241 tttagggaca acataagcta acagattttg cactttatgg tcagcattat aacgtggaac
     6301 agctaccgca gcctcaatat aggttgattt atttaagtgt tgggcaactt cttccaactc
     6361 gatacgataa ccattatatt taatttggaa atccatacgc ccaccataga gtaacagacc
     6421 ttcatctgtc attacaccca aatccccagt atgataggcc tgtaagccgt caaactggaa
     6481 aaatgccgcc tcggttctct caggattatt caaatatcct ttagagacag caggacctga
     6541 tacaacaatt tctccctgtt gaccattcgg tactacttga ccatcttcat ccaaaataaa
     6601 agttggcgag tctggtttgg tataaccaat cggcaaacgt ttataattca ctaacatctc
     6661 attagttata gcaactgctg ataaggcgac tgtagcttcg gtcggtccat aagcgttaac
     6721 aatcacagct tttggaaaac gttcgcggag cttctgagct gtttttacag ttaactcctc
     6781 tccgtcaaaa tagaaatgcg tcaaatttgg taaatgtttc ccatcgaact cacgagatag
     6841 caaagccata tcgacaaatg atggtgtcga agtccaaatc ttaaatggca aagtttgaat
     6901 agctgcaaat aaggttttaa aatccaaagt caactctttc ggtagggcaa ataaggtccc
     6961 accaagggca agcgtcggag cccaatacat aaccgacaag tcaaacgaat aggaaggttg
     7021 agccaacatt tgcggtcgct ctggtagcgc aaactcctta tccattatca tccagttggt
     7081 gaagctgagc aaattgtcat gcgaaatttg cacccctttt ggtttacccg ttgtcccaga
     7141 agtgaagata atatagtagg tatcatctcc gcttacagga tgcatcaact gataagtcga
     7201 cttcttctca aaaatggctt caacttcaga caaaccaagc actggcaaac ttgtctctag
     7261 cggaaagtct gctaccgcaa ataccaaact cggctctgct atttccagaa tagcttcaat
     7321 ccgatccaaa gcagaatgac tatctacagg gatatatgga tggccagcct tggttaaggc
     7381 aacaaagatt gccaacatct ggtactcctg tccgccaaaa acaagaacag gagagtttgc
     7441 tggtaaatcc aaactatcaa tatgggctgc taaagaatct gaatctgcct ttaaatcccc
     7501 ataactgtac aactgtccta gataatggta aacagggtag tcaggatttt ctgtcgcaaa
     7561 atgctctacc cgctctaaca tactgctaat cttttttata ctctcctctt taaaactcat
     7621 tatagataaa tcctccctgt ccaatgtcta aataactata cagatacaaa agtagtaaca
     7681 atataaaaaa atagaacagg gttctacaga taaatcgtac aactggatgt tgcatgttct
     7741 atctccttcc atctcttatt cctgcgaatt gctttaaata caatgtctag tcaatcttga
     7801 cttacttcga actcattcca ttcattagat gattaatttt aaatcaacct acattttacc
     7861 ataattttgt caatttattt cttttttcac aaaaaaatac aagaatatac ctgttacaca
     7921 aagactaccc gtgtgctagt tcatttcaaa atagcgtaag ttatgagcta gaataatttg
     7981 ttcaattcgt aactgtagtc cagccagccc tctagctaat atctgttcga tgccaaagag
     8041 acgacacagt tcagaaaaac gtgtttcaat agttcgtctc atggccatca ctttccaatt
     8101 gttatgttct tcagctcctg ccatgttttg tcgaaatggc gtccatagat ggtaaccttc
     8161 ttgctctaag tcctttttga gttcactgct caggtagcct aaatcaccta ggataaccga
     8221 ttgcttacat ccctctaata gctcataaac caccttgata tcgtggacag aggctggtgt
     8281 gacaacatag ttcagaatat aacctgataa ggtcaccaac atatgaacct tgaaaccgta
     8341 gaaccataag tgtttagagg ccttgtagcc aatatcggct aatcctttaa aaatggcaac
     8401 tctgtgatta cgaacagttt ggtaaagtgg caaaggaaaa ctatctataa tggctagttt
     8461 atcagatgga agcatgtcac tcatagcttt tcggatgaat tggactagcc aaatcaattg
     8521 ttttgaccga cgattgaaac gacttctttc tagtaactga ctacaaggaa agaggtggca
     8581 gatgctgtag aaatggcgtt gtgacgttat gcctagttca gcttgtaaca aaagcaagac
     8641 aaggagtgat tcatctgaaa ctttggctaa accaacatta cgccgatgtt taaaggaatc
     8701 tgggcaatag ttttggtaga agtgatgaca aatttgtgat aattggtgta cattccattg
     8761 caaatgatga gatttagctg tctactgtaa gtggctcatt gggactaacc tcctgtatgt
     8821 ttcgtcactt acagtatagt ccatttgggc tttttattgt attttgaaat gaactagcac
     8881 cacgggtatt tcctattttt tcaaagacaa actcagtcac gatgccatga attttccgca
     8941 catcgttgaa cggtgccagt tgattactat aattaccttt ggtgaaacag tcattgcgat
     9001 tttgaaaaat tatccgattc agacgcatct gctcactggt gttctcttct tcttggcaat
     9061 ggctttctcc tttatgtttt acatttcgca aacctatctc aatatcaacc accatcaaaa
     9121 gacaaatgta gccaccttac tctatgccca tatggtactg gttttaggca tcaacttctt
     9181 tacagttgct gtggaagtct tacctggtga gcatgctagt ttgggcttgc ctttcctcct
     9241 cattggttac ttcctctact ttatgggaat cctaatgacc agtcgctaca accaggacct
     9301 ttatcgactg gataagtcag taaggttcca gtatgctctc actttgttca taacaattat
     9361 tcttttagtc gtaagtcaaa atcacttgct tcttatagcc acaatattgg ctgtaagttc
     9421 ttacatgatt gtgagaatta cccaccgcca tcgtacctca gttagagaga gtttagaaga
     9481 ataagaataa ccgactgcct aaaaaggtgg tcggttatta acacttattt tttcaattta
     9541 ctcgcagccg cttggtcgag gataaggatg acattgtcgt ggttttggag gacgcttgct
     9601 gggacatctt ctgtcactgc tccttccaca gtcgccttaa tggcgtcagc tttttcctga
     9661 ccataggcca tgagaacaat ggtcttggct gccataatgt tggcgatgcc catggagata
     9721 gcttgttttg gtacatcttc tggattgtca aagaagcgcg cattggcttc aatggttgat
     9781 ggcgccaatt caaccagatg ggtctgacca tcaaatggag cacctggttc gttgaaaccg
     9841 atatggccgt tgcgaccgat acccaaaatt tggaaatcaa ctggatgttc agccaaaatt
     9901 ttattgtaac gttctgtttc agcaactaca tctgtcgcca aaccattcgg taaataagat
     9961 ttcttaaacg gtttgtcatt gaaaagattt tccttcataa aatgaatata ggattggtcg
    10021 ctctcctcac ctaaaccaac atactcatcc aagtttacag atgtcgcatc cgaaaagtct
    10081 aaatccgact cacgaatcaa tctgtaaaat tctaacggac tggagcctgt tgccaaacct
    10141 aataccttgg cacctccgtt caatttttct ctcaaaatgt ctaatgctac agttgctcct
    10201 tcaacttgat tgtttactac atgaattttc ataacacacc tctttggtct ataccattta
    10261 ttgtttttct ttattatatg gtatagacca atttttgtca agaatttata cttatagagt
    10321 attacatcag cacgaataat tttaattctc ttcccatcca tcaagactta agtgtctaac
    10381 tatgatataa tacatttatg acagatgtgc ttttttactt attttttatt ggtattctgt
    10441 tctgccttac tggctatttt atttctaaat caaaggtcct aaagtttatt ttctacctga
    10501 ttggtagtct attggtggct ttgccatttg ccctattgat ttattttacc tatattttat
    10561 tttagtctaa ggagtgaata tgaatactgc agattttgat tttgatttac ccgaagagct
    10621 tatcgctcaa gttccccttg aaaagcgcga cagctctaaa ctattgatcc tcgaccgcga
    10681 aaaacagagc atggttgaca gtcactttga ccatatcatc gaccagttga atcccggtga
    10741 tgccctggtc atgaacaata cacgtgttct gcctgcccgt ctctatggct acaagcctga
    10801 aactatggga catgttgagc ttttgctttt gaaaaatacc caaggtgatc agtgggaagt
    10861 tcttgccaaa ccagcaaaac gtctgaaggt cggtaccaca gtcgcttttg gtgacggacg
    10921 attaactgct actatcgtag aagaattaga acacggtgga agaattgttg aattctccta
    10981 tgaaggtatc ttccttgaag tcttggaaag tctaggcgaa atgccacttc caccttacat
    11041 tcatgagaaa ttagaagacc gtgaacgcta tcaaacagtt tatgccaagg aaaacggttc
    11101 tgccgcagct ccaactgctg gactacattt cacccaagag ttactcgaaa aaatcgaagc
    11161 taaaggagtg aagctagtct atttgactct tcacgttgga cttgggacct tccgaccagt
    11221 ctctgttgat aacgttgatg aacatgaaat gcactcagaa ttctataacc tatcagcaga
    11281 agctgctcaa accctcaatc aggtcaaaga tagcggtggt cgtatcgtcg cagtcggcac
    11341 gacatccatc cgcaccctcg aaaccatcgg taataaattt gatggccgtt tggaagctga
    11401 ttctggttgg acaaatatct tcatcaaacc tggctacacc ttccgaatcg ttaatgcctt
    11461 ctcaaccaat ttccacctgc caaaatctac tttggttatg ctagtttctg cctttgcaag
    11521 tagagaattt accttagatg cctataaaca tgctgttgaa gaacgctacc gcttctttag
    11581 ttttggggat gcaatgttta ttcaataggc tgttatcacc aatttattct gagttcagat
    11641 tttattttcc ttacatctca aggagggtcc tatgaacaag attgaaagcc gccatcagct
    11701 gatcctgtct ctaatcatgg agaagaaaat acatacccag caggaattgc aagaattact
    11761 agaggtcaac ggagtctccg tcacccaatc taccctctcc cgtgacatca agatgctcaa
    11821 tcttgtcaaa gtcaacgaag atgattcttc tcactatatc atcaacccca ttgctcctac
    11881 tcgctgggaa aaacgactgc gactctatat ggaagatgct ttggtcatgc taaaacctat
    11941 ccaacatcaa gtggtgctca agaccctacc tggattggcc aactcattcg gttctatttt
    12001 ggatgccatg gagattcctc aaattgtagc gaccgtctgc ggtgacgatg tctgtctcat
    12061 catttgtgaa gatgtcgagg gggcacaagc ttgcttcgag cacttgaaac agtttactcc
    12121 tccatttttc tttagtaaat tataaaaatt tgtgttcaca aacaacatac ttaattttaa
    12181 agataatttt tcaaataaat atcaataact tccctttata ctcataaatg aaaatataac
    12241 atgtacgcgt tttattgtag aatagtctaa cttgacttat tctatatgca gatggggtct
    12301 atttctaaaa cagcatataa taagtcacac tttcatatat ttttgtccac ttcttgtgaa
    12361 cagtgacaca tttctatctc atctttcaat gttattcttc ataagaaaag ctcttagata
    12421 tttcactaag agcttttaaa ctgtaattta ctattcaata ctgataatgg ctattccgca
    12481 gctaggcgat agactgcctc agcataaata tccattgttt tatataagtc ttctaatggc
    12541 atgcgttcat tttcctgatg ctctgtttgt tctgtatctg ggaaacatgc accaaaggcc
    12601 acacagtttg gcatggtacg agcaaaggta gccccacctg acgagattgg ctcgcttgtc
    12661 aaatctcctg tcttatcttg ataaacagac atgagcgtag ataccagctg gctgtctaat
    12721 ggcacataca aggaagcaag gtagtcgtac tcttcatagg tcaaaccaca tgattgcgct
    12781 ttggcttgta aagtagaaac tagggcttct ttatccgcag taacaggaat acgaatgtcc
    12841 aagcgaattt ctgatttttt tgcgctaatg gttagacctg caatattgaa actgagtgtc
    12901 cctgatggtt catcagtcac atcaccaaaa agcttaaatc ctgtggcatc ttcaccaact
    12961 gcattgacga taaagtccaa ggctggatgg ctttcgaaat gttccaaggc ctttgccaaa
    13021 tgaacgatag cattgacccc ctcagcagca tccttggcgt gccgcgaaat accaagaacc
    13081 gttacttgat catctttggt ttcataatca aagcctaatt gatctaattc cgcaatgact
    13141 ccggctaata aatgaccgga atagcttgcc ttggcaggta ctacgttata ggcagttccc
    13201 gcttcgatac tcagacaagg gtgacctgga ccatgcaatt taacctgtag taatcctttt
    13261 tcagcataag tcaaagggaa ggaagaatct ggtgcaaagc ccatggttgc tacttcttcc
    13321 aactgattgt agcggttcat acaccgccat aaggtctctt catctgttcc aaaaatgaaa
    13381 cgaatccgtt tgttaaattg gactcctaca tcaagaagtg cttttactgc aaataaggct
    13441 gccatcgaag gacctttatc gtcttgaaca ccgcgtccaa taatataatc tccctctacc
    13501 acagcctcaa aaggcggcgt ctgccattga ctaagatcac cagcaggtac cacatctaag
    13561 tggcaaagga ttgctaataa ttcttcgcct tgcccaattt cagcatagcc ataataacca
    13621 gcagggtcta aataagtttt aaaacccatt ttttccgtca aagccaacgt gtgctccaga
    13681 acatcctgaa tcgcttggcc aaatggcgta tctgcctgat gttcttgcaa aacagacgga
    13741 aaagctacca gttccttaat cgcctctaca caagccgctt gatgctgtgc ttgaataaaa
    13801 cttgtttcca ttgtttctcc tttcaacaga ttaaaatata gttctttctg ttttcattct
    13861 atcacaaatg gaaaaactga gccaaattta tctgtattca tgataaaatc tgacccagaa
    13921 tttcgattag aagaatgtcg caatgacaag aatcgcaatt gatgcaagta caatagctgc
    13981 aatcaattta cctacaaatt tataccaagt tccgatttca acacgaccta aagccaaggc
    14041 acccattaca atacctgagg ttggagccac caagttcaag agacctgatg cagcttggaa
    14101 agctgtgata accaggcttg ctggtacatt tacaaactca ccaagaggcg ccatgatacc
    14161 catagaagcc cctgcaagac ctgatgaaga tggaatcaag aaggacattg gtaggtagaa
    14221 gagatatgtc aaaatgatga atacttgtga agacaaacct tgcaatcctt cttcacccat
    14281 gtggagaata gtggcagtaa tcataccatc gttcatgatg acttgaatac cacgcgcgat
    14341 agcacaaatc aaagctacgc tgaaaatatc agccgcaccg aacatgaagg attttaccaa
    14401 acgttcttca ctcataccat aaactaaacc aactacaatc cctgcgatac caaagagcat
    14461 tgctccttct gggaagtacc aagtaccaag agcagctgtt gaagaaccaa tcacttgacc
    14521 gatgaatgga agaccaatca accaatcatt aaattgtgta aagatagtca cacccaaatc
    14581 ttcccatgga ataaagctac aaatcatgag aacaaatgtt agtacaaata cccagagaac
    14641 acgtttttga gctggtgata attctgcatt cacttcttga gttgctgcga cattaaagtg
    14701 ttgcatatct gcttcacgct gtttgtaaac caaggactta gtcggatcgt ttttcacttt
    14761 ctcagcatag ttggctacaa agagaacccc catcaagaga ataacaacga agaagaccaa
    14821 gcgccagatc ataccgtccg caacacttac acctgctgcg tcagaagcaa caactgtcgc
    14881 aaatgggttt acagtagaag ccaaacagcc gatttgagaa cctagcaaga tgatggctac
    14941 accagtaata ctatcaaaac caaccgccat cataacagga acaaggagcg ggaagaaagc
    15001 cattgtttct tcacccatac cataggttga gcctcccaag gcaaacaaag gcatgaggat
    15061 gtaaatcaac attttttcac gacctttgaa gcgttttaca atagaagcaa tccctacatc
    15121 aagtgcacct gtttcgttaa ctacaccaag aaaggcacca accatgatga tgaagaatgc
    15181 tacgttaatc gctgcttcag tcgcaccgtg accaagcatg gcacgaactg gagccataaa
    15241 aacatcgtaa atcccttgtg gattttgagc aaccttctca taggtaccag ccaccaaatg
    15301 tccggcttca tcaacctgat actgaccagc tggaataatc catgtcatca ctgccataaa
    15361 ggcaataatg agcatcaata ttgtataaga tgaaggcaat ttaaagcctt ttttcacttt
    15421 ttcgctcatc gcaaaaacct cctataatat tttttgagcg caacctggat tgacaagtaa
    15481 agtactttat ataagaaata gttttttgct catcaagata gtttttaaag aaatactgaa
    15541 aaactaacga tgaatagctc aacaactagt cttagatgaa agtcctgaac tgggaataca
    15601 ggttctaaat cccctattta agggaaattg tatccgtaat aaccgtatca aatatccacc
    15661 tatcttcaag agatgtctat ctccttcagt ctattatctg aaatcattgc ttatagatag
    15721 atacttgata ggaaatggat gagaggggag ggagcttaga agcccagacc ttcatgttta
    15781 gattaaaggg aacccttgtg ggactatcaa cacttccact cccctaactc catcaataaa
    15841 taacccgtct agtttaaaaa ctatatttgc atgcagagta catcaataaa gagaagcctc
    15901 aacgatacat acagctgctt agcctttgac aatgatcgtg ccgctatcgg attcaatcaa
    15961 agcgcctaag ttttctaatg aggtaatgac cgcttttgat tgcggcttat tgtttacaaa
    16021 agcaatagct gcttcaactt tcggtagcat ggaacctggt acgaattgat tttgtttgat
    16081 atattcttcc aattcagcta cggtaactgt ttctaatttt tcttggtctg gtttgttgta
    16141 gttaacaaag acatagtcta cacctgtcaa gacgataaac aagtctgcat caaccaattc
    16201 tgccaaacat tgagaagcaa agtctttatc aataactgct tccacaccgg tcagggtgcc
    16261 atctgcttct tggacaactg gaatacctcc accaccagca gctacgacaa cttcacctgc
    16321 attgagaagg gtacgaatgg taccaatttc tttgattcct acaggttttg gcgaagcaac
    16381 gactttgcgc cagccacgac cggcatcttc tttgaaggtt gcaccagtct tttctgcttc
    16441 tgctttcgct tcttcttctg tatagaatgg tccaatcggc ttggtcaaat tttcgaaggc
    16501 gggatcattc ttatccacga taacctgggt cacaatagat gctacatctt tttcaatgcc
    16561 ttccttgagc aactcatttt ccaaggcatt ttgcaaccag aaaccaatcg aaccttctgt
    16621 catggctacc aaactgtcta gtggaaaagc tgggttcttt tccgaatcag cagcaaggtt
    16681 ttgaagaagt aagtttccaa cctgaggacc attaccatgc gtgataataa ggtcatcccc
    16741 attttttatc aattttacaa ggtgcttggc tgtttgtacc aaggcctctt tttgtgcttt
    16801 agccgatgga tcggacgata aaatggcatt gccacccaag gctactacaa ttttacgatt
    16861 tgccatatct cttgcttttt cctcactttc gcgaaatagt aatcgcttac acatctatcc
    16921 tcaaaataag ggggctgggt gccagccccc ggaggttgcg atgcgttatt agatcgttaa
    16981 ttattacaca cgtggaacaa atggatcccc taaagtagcc gccatcactg ctttaatagt
    17041 gtgcatacgg ttctcagctt ggtcgaagtg acgagcatat ttgctacgga atacttcgtc
    17101 tgttacttcc atttcttcta cgccgaattt ttcagcgaca tctttaccat aaacagtgtt
    17161 tgtatcatgg aaggcaggca agcagtgcaa gaagatgaga ttttcatttt ctgctttttt
    17221 caccaattcc atattcactt ggtatggttt caagagggca acacgttcag cgaatttatc
    17281 ttcttcaccc attgataccc aaacgtctgt atagagaaca tctgcacctt tgactgcttc
    17341 gtcagcatta tcagtaatga gaacacgtgc tccactttct ttggcaaagc cttctgccaa
    17401 tgccacaaca gtttcatctg ggaagagttc ttttggagag aagatatgga cattgacacc
    17461 aagaatggca cctgtcacca agagagagtt ggcaacgttg ttacggccat caccacagta
    17521 aaccagagtc aagccttcca acttgccaaa gttttctttg acagtcaagt agtccgccaa
    17581 catttgagtt gggtgccatg catctgtcaa accattccat actggcacac cagagaattc
    17641 tgccaattct tccaccattt tttggctgaa accacggaat tcaataccgt cgaacatacg
    17701 tcccaaaact ttagcagtat cttctgtaga ttctttctta ccaagttgga tgtcatttgc
    17761 accaagatat tctggatggg caccaaggtc aatagatgct actgtgaagg cagcacgagt
    17821 acgtgttgat gttttttcaa acaagagagc aatattttta ccttccaaat aacgatgtgg
    17881 aatattgcgt tttttcaaat ctttcaaatg agctgagaaa tcaatcaacc attccaattc
    17941 tgcgcgtgtg aaatctttct ctgcaagaaa atgtctacct ttaaatacgt ttgtcattgt
    18001 ctcttctcct aatatttaaa taaattttgt caatgtctgg caccattctc catcttcttg
    18061 ataaacttca gaagttgctt ggtagccaac tgactcataa aaagtctttg cagttaactc
    18121 cgaatgtata ttcaactgat gaaagccagc ttcacgtgca taagcttcca aagagctaat
    18181 aatcattttt ccatagcctt ttccacgaaa attcggtaga gtggctattc gggttagacg
    18241 agcttgacca ggaccgacag gaagaaaacg tcccgtcgaa acaggctctt caccaataaa
    18301 gagattggcg taaactcttc cttccgtatc attctggtca aattcatctt cctttgcaat
    18361 accacgctca aggacaaata ccttatagcg gacatagata gaggctgcgc gttgccattc
    18421 ttccgaaccg attgttgttc gttctatact cggcattaga tgtcttcacg ttcaaacggc
    18481 attgacatac aacgaggtcc accacgacca cgaaccaatt cacttccgcc aatcttaatc
    18541 aaacgaagcc ctttggactc gaggatagca ttggtaatcg tattgcgttt gtaaacaact
    18601 accacacctg gtgcaatagt caatgtattt gaaccatcat tccattgctc acgaccagca
    18661 gcaaccatat caccgccacc acaacgaatc aattctactt tttcaagacc aaggttcgca
    18721 gccaaaagtt ctgccaagtc accatgttct tcttcaatat gaagcgtatc attttcatag
    18781 gttacagaga agacacgaag gtcaccttca atttctgggt ggatagtaaa cttatcatag
    18841 tcaaccatgg taaatactgt atccaaatgc atgaatttac ggttgttagc aaattcgaat
    18901 gccaatactt tcttgaagcc aacatgctgt tcaaagatat ttaccaatag tttttcaatt
    18961 gatgcagcat cggtacgttg tgaaatacct actgccaaaa catcttttga aagaaccaat
    19021 tcgtcaccac cctctatacg ggtagttgct tcacgattgt aaaccaatgg aacttttcca
    19081 ccatattctg ggtgatgggt gaagatatat ttaccataca aggtttcacg gttccgtgtt
    19141 tctgaataca tgtggttaag agaaacagca ttaccaatcg tagcaaatgg atcccgtgtg
    19201 aagtaaaggt ttggcattgg gtctattgca aatgggtaag aggattcaac caaatctgtc
    19261 aaaccttttt cttcagaagg gatttctggc aattctgcct tttgaacacc agccatcgtt
    19321 ttctcaacca gttcttgatt atcttcaata gacatcaaca acttgcgaat tgccttctta
    19381 gtcgcccgac cacgaatgtt agcttcttcg agatattcat caataaattg ttcacgaatt
    19441 tcaggtgtaa caagtgactc agcagctaat ttttccaagt agagcacttc aaccccttca
    19501 tcacgaagag cttgagcaaa agcatcatgc tctctctgtg catcttctaa gaatggaata
    19561 tcatcgaaga gtaggcgttc taggtagtca ggcatcaggt tttcaatttc cttacctggt
    19621 ctgtgtaaca taactttttt cagcttacca atttctgaaa aaacatgaat tggatggttt
    19681 gacatgatct gtcctccttg tagatttata catgatggga aacgaggagg accgtacgct
    19741 ttcctgcctc tcatttcctc tttacatcca tagtttaaca gagcaaaaaa acaaaaactt
    19801 gaaaacgctc acattcattt tgagaaattc ttcacatttt caaccttatt tataaataat
    19861 tatcgattat atcgcctata ttccgcataa ttctttgcgt tatatcatta tatgaatttt
    19921 tattttttat aaaaaaacag aaacttcaat gagtttctgt caaattttct aagaaataat
    19981 caatatctaa ataagttaac tgtttatggc tataagcaat tttaccatcc tgcttcagtt
    20041 gcttcaaaac atagctaacc gtttcccgtg tcgtagctgc taaacgcgaa atctcttgaa
    20101 tatgaatttc aaatggcaag gtagcaaact gctctcgctg gcacatatcc caataaagaa
    20161 gagccaaggc ttgaacgact cgatctgatg ccttggaacg catcgcattt cgcaagcgca
    20221 actcttgaaa acgaagcact ttggataatt tttgacagat ataagtcatt tgactcggat
    20281 ttatcttcga caaggtttca aacaagacca tcggtacaat aaaatactct aggtccgtta
    20341 tggcaatggc agtataatga taaggtttgt cctgaaacat atctccaaaa ggaaaggcac
    20401 caccctgccg aatatagtcc aaatacgtaa aactatccgt ctcatcatat tgctcaatcc
    20461 gagcatagcc cttatacaat acaaatagat aatctctagg atcctctgcg taaaaaaaga
    20521 tttgcccctt aggaatcttt cgaaaacgaa tatgcttagc taattgatca aagttatcac
    20581 gtgtcaaacg ttcaaaagtt ggatgtgccc ttagataatc atattgttcg ttgcttatca
    20641 tcaaaactcc tttctagcta aagtatcctt ctatctattt taacatatat taatgttata
    20701 tgctaatcat tactgaaaaa ttcataaaac agggtcattc ctgtgaagag gaatactatc
    20761 acagcataca aaaaactggt cctctcgaac cagtcttagt attgtcgaat gaattaactt
    20821 tcagacaagg aactgaggtg caagcaatac tagagtacgg caagccgaaa gtaacgatgt
    20881 atcaaagtta attcaaatat ctataacatt ctatgtatac ctatctagtc agtcaattca
    20941 tccgcaatct tattgatttt tcgcaaacga tggttgacac cacttttagt gatcggtacc
    21001 gttagactat ctgccaattg ctgaatggaa tagtctggat gctgaattcg caactgggca
    21061 atctcctgca agtcacctga caactgatct agaccgatag tatccataat tttgataata
    21121 ttattgattg ttttcatact agcattgacc gtctttgcaa tattagcggc ttccgcattt
    21181 gtagctcgat ttaggtcatt gcgagcctca cgaagcaatt taacattctc aaattctgtc
    21241 tttgtctctt ctgctccaat caccaaaaga aaatccataa tgtcctctgc acgttgcaga
    21301 taggtaatgg ttcccttact tcgctcaatg actttggcat ccaaaagaaa tttctgcatc
    21361 agattggcca ggtcattggc atggtcacta tagacagaag ctatttcaag ctggtatttt
    21421 cccttttcag gatccttaac agagcctgcc gctaaaaatg ctccacgaag ataggcttga
    21481 ctccacgaat cattttctaa aaccaaggga gaaatccccg tctctaatcc aaagaagcta
    21541 tcagccaaat gcaaatcgtt caatatctca ttcacgccgt cttctatcaa aactgcatac
    21601 acacgattct ttttgagatt aggtttttga tgatggcgaa tctcagcctt aatctggtag
    21661 aaatggagta acagttcata aatgtgacgg gcaatctttg cattttccgt gctgatagaa
    21721 agagtcaaac ctgacgaagc taagcccaaa ctacctgata atttgataat agcagatagc
    21781 tcgctcttat ttgagctaga ctgaagcagc aattcttcct ttacttgtac tgtaaaactc
    21841 atggccgcac ctgcaaaatc ttgagcaact cttctaccac caagtcacca tcatggaaag
    21901 ctccgccatt ttccaaacga agaaaattcg aagaaatcac acgattagcc tgtttttgca
    21961 aacctgcaaa atcgtgtttt acctgtacca agtattcatc aaactggttg ctattcatat
    22021 actcttgtgg aaccggctca atattgacca aaactgtatc aatgaattgt tcagctaggt
    22081 gagcattgag gaccgccaca tggtctgcat ctgagaaaaa ctcagtctct ccccgttggg
    22141 tcataatgtt gcacacatag gtcacttcag ccttggtttc ttttagggct ttgccaatat
    22201 cagaaatcat cagattcggc aagattgagg taaaaagaga acccggtcca agtacaatca
    22261 tgtcactttc cataatcgtt tcaactacct gacgactggc tttcggttca tcattattat
    22321 aagaatttgt cacatagaca tgatcaatca tcccattatg cttggaaatc ttgctctcac
    22381 ctgccacctc ggtcccgtct gtaaaaatag catgaagggt caaggcctgt tcgctagatg
    22441 gataaatccg ccctgtcgta tggaaaaagc gcgtcaacaa cctcatcgca ttgtaggttg
    22501 aaccctgcat ttctgaaata ccagcgatta ttaagtttcc cagtggatgc cccgccaagg
    22561 gtccatctga atccgcaaaa cgatactgga aaatttgttc ataaagtttg ggcatatccg
    22621 acatagccaa aaggacatta cgcaaatcac ctggaggggt cacctgcaaa gcctgacgaa
    22681 tttcccccga agatcctccg tcatcagcta ccgtcacgat agcggtaatc tctacatcct
    22741 tatcccgcaa actcttcaaa atgactggaa taccagtccc gcccccgata actgtaatct
    22801 ttggttttct catgagcggt tgaccgtctc cttccgtctg tccttatcac gatgactacg
    22861 attgacattc caatttttct ctaaatcatc tgccaagcgt ttagcaaagg ctacgcttct
    22921 atgttgaccg cccgtgcaac caacagcaat ggtcagtaca gacttccctt ccttctgata
    22981 acctggcaga attggctcaa tcaagccgat aaggtggctg taaaattctt cagattcctg
    23041 gtggtccata acataatcaa agacgggagc atccagacca gtcagatttc gtaattcttt
    23101 ctgataataa ggatttggca agaaacgcac atcaaagacc aagtccgcat ccagtggcag
    23161 accgtatttg aaaccaaatg acataacttc cacacggaag gagggctggt tgtcttgact
    23221 agcaaactgt tctgaaatgg ccatccgtag attgcgtggc gtcaattctg tcgtatcaat
    23281 gacattctga ctcatgtttt tcaatggagc cagtagttca cgttccagct gaatcccatc
    23341 caaaacacga ccatcagccg ccaaaggatg ggaacgacga gtttctttat agcgagcaac
    23401 caattcacta tccgtcgcat ccaagaatag gactttaaaa tctaaatcct ctgccccctc
    23461 aatctcatcc aacacctctc ggatctccga aaagaaggag cgactccgca tatctacaac
    23521 aagagcaatc ttattgttat cctggctatg gcgaatcaac tctaaaaact ttggcaagag
    23581 agtcggtggc atattatcaa tggtaaaata acccaagtcc tcaaaagact gaatggctac
    23641 tgtcttacca gctcccgaca tccctgtcac aattactaaa tggagtttgt ccgacatgac
    23701 attccctcct tttctttctt aatcaattac cgcaatgact tcaatttcaa ccttaacatc
    23761 acgtggcaag cgtgcaactt ccactgctga acgagctgga aaatctgctg agaaagctgt
    23821 tttataaact tcattaaaag ctacaaaatc attcatatct tttaggaaac aagtcgtctt
    23881 caccacatgg tcaaagtctg ttcctgccgc ttccaggata gctgcgatat ttttcaagac
    23941 ctgctccgtc tgttcttgaa tagtctctcc cacaatttca ccagtttcag gtgacaaagg
    24001 aacttgacca gaggcaaata agaaatttcc aacaaccttc ccttgaacgt atgggccaat
    24061 tgctgcaggt gccttatctg tgtgaatggt tttcatctga tgatctcctt tttatatttc
    24121 tattgatatt ataccaaaaa accggcctaa tcggccagtt ttcgtgtttg tacaataaat
    24181 ctccaggtca ggaaaatcgc tcgtagcaac aggtcaatca aaattaccag ccagacgcca
    24241 gcaattccta aaccgaacat ctgacctaag acgacaacgc ctaaaacgcg cagcccccac
    24301 attcctatca ttgtggagta gagcggcgac ttggtatccc ccaagccctg cagagcgcca
    24361 gccatgatca aagaaaccgc aaggcctggc tggttgaaag catcgatccg taaggctgtg
    24421 acgacttgac ggacggcttc taggtctttg gtaaatagca gagcaaaact tggagctccg
    24481 aaaaataaga tggtaccgag caggaacatg atggctactc cataggcaga gctgagaaat
    24541 gcgactcgtc taactgtgag gatgtccccc tttcccaagg cttgaccgat caaaaccgct
    24601 gccgctgtcg caagaccata ggctggcata taggtaaaac tctcgatatt gcctgcaatc
    24661 atgtgagaag catagacagt cgtccccagc cccacaatca aactgaaata gaccacctgt
    24721 cccaaccgca taaccaagcg ttcggctgct gcaggtaggg tcaaaaccac catttcctta
    24781 ggacttccca agcggaacaa ttgtttgaga tcaactgcca cgtcagtctg ctgtactttt
    24841 cggtaaagca agacagtacc aagcaagcga gctaagatgg ttcccaaggc ggtccctaca
    24901 atccccaaac ctgaccaaga gccaagacca aaaatcaaga aatagtccaa gaccacatta
    24961 aaaccattgg tcagtaagct cattttcata ggggttg
//
LOCUS       DASFQS010000023        24198 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.023, whole genome shotgun sequence.
ACCESSION   DASFQS010000023 DASFQS010000000
VERSION     DASFQS010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 24198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24198
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.023"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(130..2619)
                     /locus_tag="U1041_000818"
     CDS             complement(130..2619)
                     /locus_tag="U1041_000818"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012745.1,HMM:NF013652.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016503048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SP_1767 family glycosyltransferase"
                     /protein_id="HEM4767940.1"
                     /translation="MNTPTIPIRVKPISQSLDYILEHSCSVARFGDGEMDIIAGHSIP
                     YQDYDPQLASELKEILGLESNQHLMVCLSDVFENRERYTDACNHFWDGHLQHYQDYYR
                     QICKAPWYGSTFISRPYMDLADKSLSATYFQSLKQIWTDKDLLIVEGKTSRSGVGNDL
                     FQEAKSIQRIICPSKNAYSQIEDILAAIQTYGQDKLVLLMLGPTAKVLAYRLSKTGMQ
                     AIDIGHIDSEYEWFTMQAQTKIKLQHKHTAEHNFDQDIIFTEDQDYLQQIVLDLTGEI
                     LPTVLESKTIDIAFSVNNRYAQYLGATILSILAHHPKEEVRVHILYKEIAQSILQDLG
                     NLAQQTPNLELHFHLLEDQQFSAIPIRTEQFPIESFSRFLLPELLADLGRILYLDVDI
                     LVHGNLMELFQTDLEEYELGAIVEADIFKYYQWYLDSLGFGPNDAYFSSGVLLMDLDK
                     MRQNGTTNQLIAMALEKAQDYKFPDQDILNTYYKGQFKQLSPAYNYTDVRKQNRELAA
                     DEIVIEHFNGDIKAWHAITKIPDYLKVSALTYQDYQAAFVALQGKPVVSIIIPIGEES
                     PYLQACLESISVQTYRELEILLVQNKAYSHSQALMDAYQKDSRFHLLTLDTEVVSLEQ
                     AGIRKAKGDYLTFVRQTDWLDLEYVECLLTSLTEKDCQIAQTSFTVFNEEQQNYLFYS
                     EEFPIGTVIESKELLQCLHSLIWFEKEGHENLFGKLFQAQVFTQLFHRQTLSNQKLAN
                     LAYLSADTVVVSRHKLYVRRFKEKAENLEILNNRMDDLAYLFTLLANNQLLTVDFMDY
                     YKEQVQLLAKESYCQNNHQLYHQTLARLNLL"
     gene            complement(2644..3531)
                     /locus_tag="U1041_000819"
     CDS             complement(2644..3531)
                     /locus_tag="U1041_000819"
                     /inference="COORDINATES: protein motif:HMM:NF025025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4767941.1"
                     /translation="MNKPLISIIVPVYNVENYLDECIQTVLAQTYSNWELLLINDGST
                     DSSGTICDDYAKGDERIYIKHIKKSKGVSEARNTGLSLAKGEYITFLDSDDGIREDFL
                     ETCLTTAIQHEVDIVIGHFFIWDERNHTFYYFVEQAQKDQTEFLTVQEALDRQVVWKN
                     LNTAPFVVPWGKLFKASLFDTVRFPKNKRYEDEYTIHKTFLKAKQIALIHSEFYMYRR
                     HGQSFMTTDFKLETAMNNIEALEERIVDLVLAKKDTELVRQKLYNVLLHTKHELEVHQ
                     CSDSLEYLRVLNKLELFNS"
     gene            3921..5150
                     /gene="secY2"
                     /locus_tag="U1041_000820"
     CDS             3921..5150
                     /gene="secY2"
                     /locus_tag="U1041_000820"
                     /inference="COORDINATES: protein motif:HMM:TIGR02920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein translocase subunit
                     SecY2"
                     /protein_id="HEM4767942.1"
                     /translation="MNKLFFRYPVLGKTLVTGLILFIMLAGRYLPVPLVNLSGYLPQT
                     ALEELPWYQIPQSSLPMLSIFSLGLGPWMYATILISLFSIGSKQSSLSPRMMEFRKNA
                     LMLLLAFIQGLGLAIGLNYGEGGKLAIIDEIFFVTLVTIAGAFVISWLASMNAAYGLG
                     GTAIIILINIIVGQFYIFPIFLDLFQTELAFVGGLILAWTALSIYLTVVLDHAEYRIP
                     IQRIAIKNDLMKEAYMPIKLNISGGMPFMYAYTLLAFPQYIFLLLSFLFPNQAMIFQY
                     LASYFTLTNLEGILFFLAILALLTISFAFTTVNPTEKTREMRRTGDYIPLLRPGQPTK
                     AYLISLIFKIGTINAVFLLFMVGLPLLLSLDYPDIQRIAGLPGIFMMVVGILLTIIKE
                     VKMMGLKKRYGSLFELK"
     gene            5159..6703
                     /gene="asp1"
                     /locus_tag="U1041_000821"
     CDS             5159..6703
                     /gene="asp1"
                     /locus_tag="U1041_000821"
                     /inference="COORDINATES: protein motif:HMM:TIGR03713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp1"
                     /protein_id="HEM4767943.1"
                     /translation="MTHYFIPAWYPEQRTWYDNTNNWYNMWSTARFDDTINQLRMFEA
                     AGEKNRLLILNYMPNLRYYKHRYDLFEVDTWSLFDQLQGIGDYQGAVIDYLDFDWPQG
                     IEFVNSPFLALALLGGEVYAQIEFGESGQVIWISFFDKGSLFKKMVFDDRGFVSSILY
                     YKDWQPLYQDYLGLDGRWRIREFLGDNDQHIEINPQLEADISDKAFYENMEELVQERL
                     AYYLKSSSEEAHIFLTASPQHYDVVMKAKGSQKVVLSFFGQRFPLNQTERLLSMLAMA
                     DLVLTDSKKTADYLSTFKIAPVHHLSLFDTRLSLGKSQRLKELEVYFLLDGLSPDEYQ
                     ACLEVLFNRMEEYEDMHLHLVSYQTNQETVKNLSQDLEEFLETRSEPYLFFEKEEGQM
                     FEFGDSESQESRIKLSFLHSENEIIQAFQYVRLIIDLAEEPDLYTQIAGISSGIPQIN
                     RVETEFVEHMKNGFILFRDGGLLAGIDFYLAGLTNWNKSLIHSVQKISEYTSGVLVEK
                     VKEKIN"
     gene            6703..8385
                     /gene="asp2"
                     /locus_tag="U1041_000822"
     CDS             6703..8385
                     /gene="asp2"
                     /locus_tag="U1041_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp2"
                     /protein_id="HEM4767944.1"
                     /translation="MGNKIAILQVGGKNWREEVAISEKLEWHYYSLDDLDILLGQIDA
                     AKKDRSRLEKTRKRLASLLEETEKNKKAEKVQEENLLLETLEEEVELLQKKLDAYPQY
                     TVLILADEIYPGTVKKVCELFKVYEIFYPAGWNTSEWLQQFLKKVMAQAYNPREKEAF
                     VHTLSKGLFVGQYGAKVHISDMEVSPNFSGKVHMQGRKYMTFEGEFGDDFQQLAFFRY
                     NIPYGEWQFLNLFLEHSHSSTADIRMLVRLIPNGATSQIYQQWEFDGDSLKDQVVIDA
                     DIDGYLFISILAKGVGRVEIGDLHYRWGRNGLGEFILGGQRLVDHQLQEIFTYFDPAD
                     FKPPLCVYFSGFRTAEGFEGFWMMKGLKTPFMLICDPRLDGGAFYLGSQELEDKIQGK
                     IEETLDFLGFDSSQLILSGMSMGTFGASYYGAKLKPRGIVISKPLLSLGDMALAERLH
                     RPGGFPTSLDLLYSTYQSMDQEAADRLNQRFWTLMEEGVYASTKFAVAYMKEDDYDAA
                     AFENLVRTSKETGATILGRGYSGRHLDGSAATSGWFIKQYYDMLHKDFNRRR"
     gene            8387..9334
                     /gene="asp3"
                     /locus_tag="U1041_000823"
     CDS             8387..9334
                     /gene="asp3"
                     /locus_tag="U1041_000823"
                     /inference="COORDINATES: protein motif:HMM:TIGR03711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp3"
                     /protein_id="HEM4767945.1"
                     /translation="MRLEIKWNHFAQDTYSYGSRIDFEKEAISFENPLMPPSFEIKHW
                     YSRTNFQAKRQTPTLPILKKGSSYQLILDAEAYPQGSIYLRVVFFDRFGKELGFEILK
                     DKKASFTYPKEAYSYEIALLNAGCERLTFRSIWLQSVFSPQEELIFLEEKCNPTSSSR
                     LHIVFLEHPEDVYYEKDLFAECIDRLGDIVFVSDRADDVSMFHLQTEQFIMDCVARHP
                     EARVQFFAYGPRGNLAAAYYSEKIKPAGLFLSSVFYPIETYHSLLEEQGISLSHVEDL
                     IQRARREREERKDVSEGFVSSLVHPLRFLIQQFLDKDGS"
     gene            9339..11723
                     /gene="secA2"
                     /locus_tag="U1041_000824"
     CDS             9339..11723
                     /gene="secA2"
                     /locus_tag="U1041_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007893625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HEM4767946.1"
                     /translation="MKKLRQFFSMDYYRLKRLKRIFTEIDSLKEDMAGLTDAEMQAKT
                     QEFKARLAAGASLDDLMVEAYALVREAAKRVLGMFPYPVQVMGAIVLHEGNIAEMKTG
                     EGKTLTATMPLYLNALEGKSVMLVTTSGYLARRDAEEMGAVYHFLGLTVACGVDDSDD
                     RTTKAALTKKDIYAADIVYTTNGSLGFDYLFENLATHKNNKYLRPFHYAIIDEADAVL
                     LDTAQTPLIVSGSPRVQSNLYAIADHFVTGLKEGVGYYYNREHGEVWLTQAGMDEAER
                     YFSSQELFDIDHAELVRHVILALQAHKLYTLGKNYVIQDDEVKLLDKTDGRVLTGTRL
                     QGGIHQAIEQKEGVKVTPEMRSIASVTYQNLFLMFDKLAGMTGTGKTAEAEFIETYNM
                     EVIQIPTNKPVIRKDYPDKIYTTMPEKITASLDLVKKIHATGQPILLVTGSVNMSEIY
                     SEMLLLEGIPHSLLNAYNAAKEAQMVAEAGQLGTVTVATNMAGRGTDIKLGPGVRELG
                     GLAVIGTERMKSQRMDLQMRGRSGRQGDPGFSQFFACLEDDLLIENGGKWIQDFYKKN
                     KDLVDPSKPQELTGKRFRKALQHSQEASDGTGRASRGMTLQFDESVKLQRDYVYRERD
                     AIIEGRSQALDILQFAKEDIDLYLKRHPILEAHSLERYILDHITYDFQAFPEHLEVRN
                     HKQVRAFLLGIIEAEIQRKKELLTTDYLQFERLAVLKAIDECWVEEVDYLQQLRIIAS
                     ARQVAQRNPVFEYHQEAYKGYQKMKEEIKRGILQNILLSDVSYTEKGEMQVYFA"
     gene            11737..13239
                     /gene="gtfA"
                     /locus_tag="U1041_000825"
     CDS             11737..13239
                     /gene="gtfA"
                     /locus_tag="U1041_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosyltransferase GtfA"
                     /protein_id="HEM4767947.1"
                     /translation="MTVYNINLGIGWASSGVEYAQAYRAQLLRRKGVDAKFIFTDFFG
                     QDTLADLTRNIGFEDKEIIWLYTFFTDQKIAPISYTLDQLREDVAGNITREERDGKIV
                     RFFYEEQDLFLTAYLRQEDQDLVHRVEYVSRGMLIRKDFFTYMRSFSEYYTPRDNRAH
                     LYLRRYFNEDGSVAYEEVIDGENSVYRMPDAILSSKDEWIAYFMQQLQLTAKDIVILD
                     RATGTGQAVFANKGPARLGVVIHAEHYSPNSLTDQTILWNNFYDYQFVHADSVDFFIT
                     STQRQKEVLEEQFARYVGKVPRVLDIPVGSIDTIRHSEKRKPYSMITASRLATEKHVD
                     WLTKAVIAAKKHLPELTFDIYGSGGEQGKIETIIKEYGAEDYIQLKGHQDLTEVYQDY
                     ELYLTASKSEGFGLTLLEAIGAGLPLIGFDAPYGNQTFIQDGLNGYLLPFPQVEDEKE
                     IVAQYCQAIRIFFSQENRQAMQEASYQVASKFLTYEIEKKWLDLVEEVAQ"
     gene            13236..14561
                     /gene="gtfB"
                     /locus_tag="U1041_000826"
     CDS             13236..14561
                     /gene="gtfB"
                     /locus_tag="U1041_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosylation chaperone
                     GtfB"
                     /protein_id="HEM4767948.1"
                     /translation="MIHLFDSYHQGSWDLHYSLLCSGYHNPTIVLNDDGFLPHDVTSP
                     YRFFTQYEQMEGHALYFNQLQTPAFWEIRGDNSQAAIYNFANKRAQIHYAHPSHKRLI
                     NAVDWYDEAGRIVVTDRYNDKGVRFGQTSYDRQGQATQTSYYGLKGQEVLVENHETGD
                     LILNYQNRIYFFKTKHEWIAFYLKEAGFELDRIIYNSLGLSFLTTFYLNEDGEDILFW
                     QEPIHDSIPGNMLLLLNQQSRRPSKVVVQDKATYERLLELASSEQREQIVYLGFLYPF
                     KEKKKLKPEALILTNSDQIEQLDNLITGLPNLHFHIGAITEMSSHLMAVGNHANVTLY
                     PNISMDMVRDLYQKTSIYLDINHGGEILSAVRTAFEHRLLIFAFGETAHAKIYVAKEN
                     CFSSLQVEVLVAKIQNLLTESGEEANRLLTCQEEEANLVDVAAYQRLIG"
     gene            14570..14752
                     /locus_tag="U1041_000827"
     CDS             14570..14752
                     /locus_tag="U1041_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767949.1"
                     /translation="MTRKHPLRERIEQRLEEERYVLPKKKKKKRGFDFHIIIILSVLI
                     SLGLIIFRIIQFFFDK"
     gene            complement(15508..15735)
                     /locus_tag="U1041_000828"
     CDS             complement(15508..15735)
                     /locus_tag="U1041_000828"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767950.1"
                     /translation="MWDREFDREELYYSSLREAREEAWEEAWGKAEQKERLEFAQRLL
                     AEGLDNDIIARCTTLPLSLVEQLRSQLVAGF"
     gene            complement(15769..16683)
                     /locus_tag="U1041_000829"
     CDS             complement(15769..16683)
                     /locus_tag="U1041_000829"
                     /inference="COORDINATES: protein motif:HMM:TIGR01784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HEM4767951.1"
                     /translation="MRHSRLKPTQDTVAKKIFQNKEVTKAFVSDILNLAVTEVELLDG
                     HQISLPNDHSPRGFYTVTDILVKLDDGTQVIIEIQIVKQKFFINRLWTYICTQVHDNF
                     EHARQEHGDTHTTHEWLYPVYGIALVEKNYFDDDQPFHIFSLREENTNQELFIQPKNS
                     DKQHSLVKLAFLELGKYQPETISEYDLKKWFEFFGNRDFTIQPDKIISQAEHALDYTT
                     WTKEEQDMWDKEFDREELYYSSLREAREEAWEEAWEEAREETEQKERLEFAQRLLADG
                     LDNDAIARYTTLPLSLVEQLRSQLATGG"
     gene            17507..>24198
                     /locus_tag="U1041_000830"
     CDS             17507..>24198
                     /locus_tag="U1041_000830"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017183.1,HMM:TIGR04224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec-dependent serine-rich glycoprotein
                     adhesin"
                     /protein_id="HEM4767952.1"
                     /translation="MNKKRFNKHFDEIGRRSRVKMHKSGKNWVRTVLSQISLLRVIRG
                     KGQAKVTLPIIETNEELRSSRLAYLQALLASGAAISGTTLALNTFAEEQVAVVEQQVD
                     STDTLVDKNIVVVENVLTEVVSEESVASDTGSATASEAGSVSASTSGSFSASQSASVS
                     LSSSESASLSVSVSASTSASVSVSTSASESASTSMSMSVSSSLVEGKTSSIGAVGSEN
                     SSEPSGSKVSESSLVAVESRGALSYAPSTDLLAPTDALAQPDSTIVAMATASSEVATG
                     LVATSLNSSSSSQSETAQMANSLDYTNLDNAIASLQHALSYPEVDATTTTASRYKRYE
                     TALKVAKAALEESLALREDSSLGQDKVDTMALIAGQAAISLTGRINQIQAAGGKFAIA
                     EGTDVRAVTKGSAGTDVSSSGVINFRTATASNEFKAGALSTGSLTSYVSRVFYDYNAD
                     SNVLTYTITLQPKANGKIGIGIGIDSSSTFGQVTVTGATLESQLTNRVLNPGPTPKGN
                     YYYLSNVVANQTVTFQLTVQTNGTGVNNIRLKTANINTTNNSDFGLVASNVNDPYYFI
                     NPDQRLITSNNNTKVIAAFVSGGSQTIYSKTEDAPVITDGLTDKSTSITGTGTPYSTV
                     TLTFSNGAKTTTVVQANGTWTATPPSGAMAASTTVSAVQDTGKAFPAKDDGIQNDVLN
                     SQENRISAATVATIRDTTRPVVAYPKQVYFFYNTPLSKDLVLATVTEVSNSDTWQKWG
                     ISRADDTGTRDNEDNLNSMLVDANGSPVSLGIRQVSGTTNQWEIYMPKGSMIAPQHFN
                     GSNLSASEQDFFTRWPFVVDAAGNRNILGNSAGMRLTAVAVPSGYINKAFGQTATSTE
                     ITNVVQSWTSSGRFFDGTSPAKSLTYVVQGTPPPTNVTKTVPVAVTTGEGLSTTATVL
                     VNYPPSFSNVSQNVYVFSGEPTKVDKQVATITETTGQTFTTQTANASGLTVNTSGVIS
                     TGQTFTGAVGSQTVTLTATDNYNNSNSTTVLVRSYNVTGGQPMTAEVGTKVTTESILN
                     HVKATATGGGTAGLAGSGLDNLSSYSIVSGYDHEPTVGTKTVRVRVTLTDGNYKDVDV
                     QINYRDTTAPTVQLTSQQIYVFNGESVKILNPASPTADNPVSTKIQLATVTDATGVAT
                     TASSNGDVQNSSGSSNSRGMDVTVEGSSATSKTVYLSGTPTVGNLPNNGGPAYGWYGN
                     YLKISDTANPANTTTYNSTDARYHLVVLGTSVATIADRDIQSPTFTRVTEQNILDVVS
                     VDFGNASDYNNANKANIRKVLLSNTDTGTVTAGQKTAVVRVYTSTNTYKDVPVTFTYR
                     DMTAPTATLTATSLYAFEGQALRAPIQLATLADAPNGSGLTGGQATTQIVMASSTTEN
                     GKGLTINSSGQVSGTPIAGSQGSYTNRVLVRDNAGNTGYSNSFKMYVLRANPVTATRE
                     YTGNNKFTTAEITDLIKNQIAADSRISVADLSALTYTIPDHTYAVGSQTIQATVRTPA
                     GDTKTVPVTLNYTDTTNPTITNRKDVTIFIGKQIEMVGNSTLIPVTATDVSGVRYNLN
                     SATFGVTVDSATGQLQGTATGSPGFNTRTVTVTDGQGRTTTSENFKIYLIQATTTTVT
                     REYGQTISADEIKNAITLNRGTNGSPVTVNMELLNAIPQNANGTVRVRLTTSEGVTTI
                     VDVPVVYTNERPTIQASNQTITKNREGTPTMYDVTTGVTVRDREDDRSPSDSLVTRKR
                     YEIVNANNVVVKTVAEGAATNIDIRDLPAGNYTVKIYATDSGATNPVEGSYILTVNAD
                     TQAPTILTTQNVSVFSGRLIEMVSGRTLKPVTAEDPSGLTYRLTGNSTLNLSVDSATG
                     QLQGTTSPTAATGFYTYNVTVTDSSVNANSRVSPGFRIYVMGITVTPIERQYGQSVTI
                     DDVKNAVSVNLAGSTVTVEEVVEGTVPQATGVAKLRLTTSEGVTTVVDVPITYTNESP
                     VVTVPGAKTILKQPTGQPTSINLAEGVTVSDREDDRSPTDNLTTTVTYEILDGNGRPV
                     MTVPAGSSTTVDVGNLPAGDYTVRISALDSDGTQTVTGSYPLRINDNTPPVITATDRT
                     VDRSDGSHIDLSTGVTIRDTEDNASGTALTVTYKVVDSKGATVYEGRDPNVASSLLQA
                     GDYTVTVSATDSHGAKTEKSYKLKVTDRVSVSKSASLSASESASTSASTSASTSASAS
                     ASESASTSASTSASTSASTSASTSASTSASTSASTSASTSA"
BASE COUNT         6772 a         4625 c         5632 g         7169 t
ORIGIN      
        1 ccagactgtt aaagccaatc aaccactgcg ctgagatgtt gacacaaacc ctgagaagtg
       61 cgctggactt gagcccagcc tcccctcgtc gaagtattaa aggagagact aaatgacctt
      121 atctgctggc tagagtagat tgagtcttgc taaggtttga tgatagagtt gatgattatt
      181 ttgacaatag ctttccttgg ctagtagttg gacttgttct ttatagtaat ccataaaatc
      241 aacggtcaac agttggttat tggctagcaa ggtaaagaga taggctaggt catccattct
      301 attgtttagt atttctaagt tttcagcttt ttctttaaag cgacgcacat agagtttatg
      361 acggctaacc accactgtat cagcacttag ataggcaaga ttggctagtt tttggttgct
      421 taatgtctgt cggtgaaaga gttgtgtgaa gacttgggct tggaataact ttccaaacaa
      481 attctcatgt ccttcttttt caaaccaaat caaactgtgt aaacattgaa gtagctcttt
      541 gctctctatg acggtaccga ttggaaactc ttctgaatag aagaggtagt tttgctgttc
      601 ctcattaaag acagtgaaag aggtctgggc aatctggcaa tctttctccg tcaaggaggt
      661 caataagcac tcgacgtact ccaagtccaa ccagtcagtc tggcggacaa aggttaggta
      721 gtctcctttt gccttcctga tgccagcctg ctcgagagaa acaacttcgg tatctaaggt
      781 gagtaagtgg aaacggctat ctttctggta agcatccatt agtgcttggc tatgtgagta
      841 ggccttgttc tgcaccaaga ggatttcaag ctcgcgatag gtctgcacgc tgatagattc
      901 taggcaggct tggagataag ggctttcttc gccgataggg ataatgatgc tgaccacagg
      961 cttaccctgt agggctacga atgctgcctg atagtcttgg taggtcaggg cagaaacctt
     1021 gagatagtcg ggtatttttg tgatagcatg ccaggccttg atgtcaccgt tgaagtgttc
     1081 gatgacaatc tcatcagctg ccagttccct attttgtttg cggacatcgg tatagttgta
     1141 ggcaggtgac aattgcttga actgtccctt gtagtaggta tttaaaatat cttggtcagg
     1201 gaatttatag tcttgtgcct tttctaaagc catggcaatc aactgattgg tagtaccatt
     1261 ctgacgcatc ttgtccagat ccatcaaaag aacgcccgaa ctgaagtagg catcatttgg
     1321 accaaagccc agactatcca gataccattg gtagtatttg aaaatatctg cttcgacgat
     1381 ggctccaagc tcgtattcct ctagatccgt ttggaagagc tccatcaagt ttccatgtac
     1441 caagatgtcc acgtctaggt agagaattcg acccaagtca gctaggagtt ctggaagtag
     1501 gaaacgggag aaggattcaa ttggaaattg ttcagttcgg ataggaatgg ctgaaaactg
     1561 ctggtcttcc aacaaatgga agtgcaactc taaattggga gtttgttgag ctaggttgcc
     1621 caagtcttgg agaatgctct gagcaatctc cttgtaaaga atatggactc gtacctcttc
     1681 ctttggatga tgggcgagga tggataggat ggtagcacca aggtattggg catagcgatt
     1741 attaacagag aaagcaatat ctatggtttt gctttctagg acagtaggca ggatctcacc
     1801 tgtcaagtct aagacaattt gttgtagata gtcttgatcc tcagtgaaga tgatatcctg
     1861 gtcaaaatta tgttcagctg tgtgcttgtg ttggagtttg attttggttt gagcctgcat
     1921 ggtaaaccat tcatactccg aatcaatatg gccaatatca attgcttgca tacctgtttt
     1981 agacaggcga taggccagga ctttggcagt tggtcccaac attaaaagga ctagtttgtc
     2041 ttgtccgtag gtctggatag cagctagaat atcctcgatt tgggaatagg cattcttaga
     2101 cgggcagatg atgcgctgga tggatttggc ctcttgaaag aggtcattgc caacacctga
     2161 gcgagaggtt ttgccttcga caatcaggag gtctttgtct gtccaaatct gctttaagct
     2221 ttgaaaatag gtagcagata aacttttatc ggctaggtcc atatagggac gggagataaa
     2281 ggtacttcca taccaaggag ctttacaaat ctggcggtag tagtcttggt agtgctgtaa
     2341 gtgcccatcc caaaaatgat tacaggcgtc ggtatagcgt tctctgtttt cgaaaacatc
     2401 tgacaggcag accatcaagt gctggttact ttcaagtcct agtatctctt ttaattcgct
     2461 ggctagctga gggtcatagt cttggtaagg aatgctgtga cctgcaatga tgtccatctc
     2521 tccatcgcca aatcgtgcga cagagcagga gtgttccaaa atatagtcta ggctttgaga
     2581 aataggtttt actcggatgg ggatagttgg tgtattcata ggaaattgct tgtttctttc
     2641 tgattaggag ttaaatagtt ccagtttgtt taaaacacgt aggtattcta agctatcact
     2701 acactgatga acttccaatt catgtttggt atgtaatagg acattataga gtttttggcg
     2761 aaccagctcc gtatccttct tggctaaaac caaatcaacg atgcgttctt ccaaggcttc
     2821 gatattgttc atggctgttt ctagtttgaa gtcggtggtc ataaagctct gaccatgacg
     2881 gcggtacatg taaaattcac tatgaatcag tgcgatttgc ttggctttta aaaaggtctt
     2941 gtgaatggta tattcatcct catacctttt attcttggga aaacgaacag tatcaaacaa
     3001 ggatgctttg aagagtttgc cccacggaac tacaaagggg gcagtattga ggtttttcca
     3061 aacaacttgt cggtcgaggg cttcttgaac ggttagaaat tctgtctgat ccttttgtgc
     3121 ctgctcaacg aagtagtaga aggtatgatt tctctcgtcc cagatgaaaa agtgaccaat
     3181 gacaatgtct acctcatgct gaatggcagt tgtcaggcag gtttctagaa aatcttcacg
     3241 aataccatcg tcagagtcta ggaaggtaat atactcccct tttgcaaggg acagaccagt
     3301 attgcgggct tcggacacac ctttgctttt ttttatatgc tttatgtaga tacgctcatc
     3361 ccctttagca taatcatcgc atatagtccc agaagagtcg gtggaaccat catttatgag
     3421 taacaattcc caattggagt aggtttgagc gaggacggtt tgaatacatt catccagata
     3481 attttcgacg ttatagactg ggacgataat gctgattagt ggcttattca agagaatctc
     3541 cttttagata ggtatacttg attattttat cacaaaatgg acaatttata cagtaaaatt
     3601 cgatacaagc gctttgcttg tgaatacagg ttcttaggca agaaaatcat tgtccagtat
     3661 atgctgccag caacccgcca atttacttcc gatggacatt atgataaaat aaaatgatat
     3721 agaaacttag gacctgtatt tacagttcag cacttccagc aactgctggt ttttcagtta
     3781 ctcattgttc gttgttttca aaatacagtc agtattctct aacaacctgc cttgattagc
     3841 gaaaaacaat ctcttctatt acgagtatac aagcacttca cttgtgaata cagtttcttg
     3901 aaagaatgtt agatttagcg atgaataaat tattttttag gtatcctgtt ttaggaaaaa
     3961 cccttgttac aggtttgatt ttgtttatca tgctagcagg tcgttatcta cctgttccct
     4021 tagtgaattt gtcgggctat ctgcctcaga cagcgcttga agaactacct tggtatcaga
     4081 taccacaaag tagtttgccc atgctatcca tcttttcact aggtttaggg ccttggatgt
     4141 atgctacgat tctcatctct ctcttctcaa ttggtagtaa gcagagctct ctttctccac
     4201 ggatgatgga gtttcgtaag aatgctctga tgttgctttt ggcctttatt cagggcttgg
     4261 ggctggctat tggattgaac tatggcgagg gtggcaaact agccattatt gatgagattt
     4321 tttttgtaac cttggtcacg attgcaggtg cctttgtgat tagctggctg gccagcatga
     4381 atgctgctta tggtctgggg gggacagcta ttatcattct gatcaatatt attgttgggc
     4441 agttttatat ttttcctatt ttccttgatt tattccagac agaattggct tttgtaggag
     4501 ggttgatatt agcctggaca gccctttcca tctatttaac ggttgtatta gaccatgcgg
     4561 aataccggat acctatccaa cggattgcta tcaagaacga tttgatgaaa gaggcttata
     4621 tgcctattaa actcaatata tcgggtggga tgcctttcat gtatgcctat accctattgg
     4681 cttttccgca gtatattttc ttgcttttgt ctttcttgtt tcccaatcag gccatgattt
     4741 ttcaatattt ggctagttat tttacattga cgaatttgga agggattttg ttctttttgg
     4801 ctatattggc tcttttaacc atcagttttg cctttacaac agttaatcca acagaaaaaa
     4861 caagagaaat gcgtcgaaca ggagattata ttcctcttct tagaccaggt cagccaacca
     4921 aggcctacct gatctccctt atttttaaaa ttggtaccat caatgctgtt ttcttgctgt
     4981 ttatggttgg tcttcctctg ttgcttagtc tggattatcc agatattcag aggattgcag
     5041 gactgccagg gatttttatg atggttgtag gtattttgtt gacaattatc aaagaagtga
     5101 aaatgatggg cttaaagaaa cgctatggtt cactctttga attgaagtag gagaatgtat
     5161 gacacattac tttattccag cttggtatcc agaacagagg acttggtatg ataataccaa
     5221 taactggtac aatatgtggt cgaccgctcg ttttgatgac accatcaatc agttgcgcat
     5281 gttcgaagcg gcaggagaaa agaatcgact gctcatcttg aattatatgc ccaatcttcg
     5341 gtattacaag caccgttacg atttgtttga ggtggatacc tggtctcttt tcgatcagtt
     5401 gcaaggaatt ggagactatc agggagcagt gattgattat ctggattttg actggccaca
     5461 ggggattgaa tttgtcaata gccctttcct cgctcttgct ctcttaggtg gagaagtcta
     5521 tgcccagatc gaatttggtg aatcgggaca ggttatttgg attagtttct ttgacaaggg
     5581 gagtttgttc aagaaaatgg tctttgatga tcggggcttt gtatcaagta ttctttacta
     5641 caaggattgg cagcccctct atcaggatta tttgggctta gacggcaggt ggagaattcg
     5701 ggaattttta ggagacaatg accaacatat tgaaatcaat cctcaattgg aagcggacat
     5761 ctcggataaa gcattctatg agaacatgga agaattggtt caagaacgtt tggcttatta
     5821 tctgaaaagt agttcagagg aggcccatat ctttttaacg gcctctcctc agcactatga
     5881 tgtggtcatg aaggccaagg gtagccaaaa ggttgttcta tcgttttttg gtcaacgttt
     5941 tccattgaat cagacagaac ggttactatc catgttggct atggctgact tggttcttac
     6001 ggatagtaag aagacagctg attacttgtc aacatttaag attgctccgg tccatcattt
     6061 gtccttgttt gatacccgtt tgtccttggg taagagccaa cgtttgaaag aactagaagt
     6121 ttacttttta ttggatggtt taagcccaga cgagtaccag gcttgcttgg aagtgctctt
     6181 taacaggatg gaagaatacg aggatatgca tctgcatctg gtgtcttatc agacaaacca
     6241 agaaacggtc aaaaatctta gtcaagattt agaagaattt ctagaaacca ggtcggaacc
     6301 ctatctgttt tttgaaaaag aagaaggaca gatgttcgaa tttggagatt cagaaagtca
     6361 ggagagtcgc atcaagctgt cctttttaca tagcgaaaat gagattattc aagcctttca
     6421 atatgttcga ttgattattg atttggcaga agagccagat ttgtataccc aaattgcagg
     6481 gattagttct ggtattcctc aaatcaatcg agtggagaca gaatttgttg aacatatgaa
     6541 gaatggtttt attcttttca gggatggagg tctactagca ggtatcgatt tctacctagc
     6601 aggtctgacc aattggaata agtcgctcat tcattctgtt caaaaaattt cggaatatac
     6661 aagtggtgtc ctagtagaaa aagtgaaaga aaaaataaac taatgggaaa taaaatagct
     6721 attttacaag ttggtggaaa gaattggcgg gaagaagtag ccatctctga aaagttagaa
     6781 tggcattatt attctctaga tgatttggac atcctgcttg gtcagattga tgctgcgaaa
     6841 aaggataggt ctagattaga gaaaacaaga aaacggttgg caagcttgtt agaggaaact
     6901 gaaaaaaata agaaagctga gaaagtccag gaggagaatc tgctactgga aaccttggaa
     6961 gaagaggtag agcttttaca gaaaaaactg gatgcttatc ctcagtatac tgtccttatt
     7021 ttagctgatg aaatataccc agggactgtg aaaaaggttt gtgaactgtt taaggtttat
     7081 gagatttttt atccagcagg ttggaacacg tcggaatggc tccagcagtt tttaaaaaag
     7141 gtcatggctc aagcctataa tcctagagaa aaagaggctt ttgttcatac cctatccaag
     7201 ggattatttg ttggacaata tggtgccaag gttcatatta gtgatatgga agtttccccc
     7261 aatttttcag gcaaggttca catgcagggg cggaaataca tgacttttga aggggaattt
     7321 ggggacgatt ttcagcagtt ggccttcttt cgttacaata ttccctatgg tgaatggcag
     7381 tttttgaatt tatttttaga gcacagtcat tcttctacgg ctgacatccg aatgcttgtt
     7441 cggctcatcc caaatggggc taccagtcaa atttatcagc agtgggaatt tgatggggat
     7501 agcttgaagg atcaggttgt catcgatgct gatatagatg gctatctctt catttctatc
     7561 ttagctaaag gtgttggaag agtagaaatc ggtgaccttc actatcgttg gggaaggaat
     7621 ggcttaggtg agtttatctt gggcggacaa cggcttgtcg accatcagct ccaggagatt
     7681 tttacttact ttgaccctgc tgattttaaa ccacccctct gtgtttattt ctcaggtttt
     7741 cgtactgccg aaggctttga aggtttttgg atgatgaaag gcttgaaaac accctttatg
     7801 ctgatttgtg atccaagatt ggatggtggg gccttctatt tgggaagtca ggaactggaa
     7861 gataagattc aaggcaagat agaagaaact ttggattttc taggttttga ttccagtcaa
     7921 ttgatcctat ccggcatgtc catggggact tttggtgctt cctactatgg agccaaatta
     7981 aaacctcgtg ggattgtgat tagcaagccc cttttgagtt tgggggatat ggctttagct
     8041 gagcgtttac acaggcctgg tggatttcca acgtccttgg atttgttata ttcaacctat
     8101 cagtccatgg atcaagaagc agcagacagg ctcaaccagc gtttttggac cttgatggaa
     8161 gaaggagtct atgcctcgac aaaatttgca gtggcctaca tgaaagaaga tgattatgat
     8221 gcggctgctt ttgaaaattt ggttcgaacc agtaaggaaa cgggagcgac tattttgggt
     8281 agaggttact caggtcgcca cctagatggt agtgctgcaa cttctggttg gtttatcaag
     8341 cagtattatg atatgctgca caaggatttt aataggagaa gatagtgtgc ggttagagat
     8401 taagtggaac cattttgcac aagacaccta ttcgtatggg agtcggattg attttgaaaa
     8461 agaggctatt tcttttgaaa atcccctcat gcctccaagt tttgaaataa agcactggta
     8521 ttctcggacc aatttccagg ccaagcggca gaccccgact cttcctattt tgaaaaaggg
     8581 atccagctac cagttgattc tggatgcgga ggcctatcct caggggagta tttacttgcg
     8641 cgtggtgttt tttgatcgtt ttggaaaaga gctgggattt gagattttaa aagataagaa
     8701 agcatctttt acctatccca aggaagctta ttcctacgag attgccttgt tgaatgctgg
     8761 ttgtgaacgt ttgacctttc gctctatttg gttgcaatcg gtcttttccc ctcaggaaga
     8821 gttgattttt ttggaagaaa aatgtaatcc tacaagttct tctcgcttac atattgtttt
     8881 tctggagcat cctgaagatg tgtactatga gaaggatttg tttgcagaat gtatagacag
     8941 gctaggtgat atagtctttg tttctgatag agctgacgat gtgtccatgt tccatcttca
     9001 aacggagcaa tttatcatgg attgtgtggc tagacacccg gaagcaaggg ttcagttttt
     9061 tgcttatggg ccaagaggga atctagcagc tgcttactat agcgagaaaa taaaaccggc
     9121 tggcttgttt ctaagttcgg tattttatcc tattgagacc tatcattcac ttttggaaga
     9181 acaagggatt tccctttcgc atgtagagga tttgatacag cgtgctagga gggagagaga
     9241 agagaggaag gatgtcagtg aaggttttgt ttcttctctg gttcatcccc tccgattcct
     9301 tatccagcaa tttttagaca aggacggttc ttgaacgaat gaaaaaactc cgacaatttt
     9361 tctctatgga ttattatcgt ttaaagagat tgaagaggat ttttacagaa attgatagct
     9421 taaaagagga tatggcaggc ctgacggatg ctgaaatgca agctaaaact caggagttca
     9481 aagcgagatt ggcggctggt gctagcttgg atgatctcat ggtggaggcc tatgccttgg
     9541 ttcgcgaggc ggccaagcgt gtcttgggca tgtttcccta tcctgttcaa gtaatgggag
     9601 ccattgttct tcacgagggc aatattgcgg agatgaagac gggcgagggc aaaaccctaa
     9661 cagctaccat gcctctctat ctcaatgctt tagaaggcaa gagtgttatg ctggtaacga
     9721 ccagtggcta tttagcgcgt cgtgatgcag aagagatggg agcggtctat cattttttgg
     9781 gattgacagt ggcttgtggt gtggatgatt cggatgatcg gaccaccaaa gctgctctca
     9841 ctaagaaaga catctatgca gcggacattg tttatacgac caatggtagt ttaggttttg
     9901 attatctctt tgagaatctg gcgacccata agaataataa atacctgcgc ccttttcatt
     9961 atgccattat tgatgaagca gatgctgtct tgctagacac agcccaaaca cctttgattg
    10021 tttcaggctc tccccgtgtg cagtctaacc tttatgctat tgctgatcat ttcgttactg
    10081 gtttgaaaga gggcgtgggc tattactata accgagagca cggagaagtt tggttgaccc
    10141 aggcaggaat ggatgaggca gagcgttatt ttagttcgca ggaattgttt gatattgatc
    10201 atgcggaatt ggtccgtcat gtcatcttgg ccttgcaggc ccataagtta tacactttgg
    10261 gaaagaatta tgttatccaa gatgatgagg tgaaattgct ggacaagacg gatgggcgtg
    10321 tgctgactgg aaccaggcta caggggggca ttcatcaggc tattgaacaa aaagaagggg
    10381 tcaaggtcac tccggaaatg cgttcgattg cgtcagtgac ctaccaaaat cttttcttga
    10441 tgtttgataa gctggctgga atgacaggaa cgggtaagac cgcagaagcg gaatttatcg
    10501 aaacctataa catggaagtg attcaaatcc cgaccaacaa gcctgtcatt cgcaaggatt
    10561 atccggataa gatttatacg accatgcctg aaaaaattac tgcttccttg gatttggtga
    10621 agaaaatcca tgcgacaggt caacccatcc ttctggtaac aggatcggtc aatatgtcag
    10681 agatttattc ggaaatgctt ttgttggaag ggattcccca cagcttgctc aatgcctata
    10741 atgcagcgaa agaagcgcag atggtggcag aagctggcca gctaggaaca gtcacggtgg
    10801 ctaccaatat ggctggtcgt ggaacggata taaagctggg accaggtgtg cgcgaattgg
    10861 gtggtctggc tgttataggg acagaacgga tgaaaagtca acgaatggac ctgcaaatgc
    10921 gcggtcgttc aggtcgccag ggagacccag gttttagtca attttttgcc tgcttagaag
    10981 atgatcttct gattgaaaat ggtggtaagt ggattcaaga tttttataag aagaataaag
    11041 atttggtgga tccgagcaag ccacaagaat tgactgggaa acggttcagg aaagccttac
    11101 aacactctca agaggctagt gatggtactg gaagagcctc acggggcatg accctgcaat
    11161 ttgacgaaag cgtcaaactc caacgggatt atgtttatag agaaagagat gctattattg
    11221 aggggcggag tcaggctcta gatattttgc aatttgccaa agaagacatt gacctctacc
    11281 ttaaacgcca tccaatatta gaagctcata gtttggaacg ctatatttta gaccatatta
    11341 cctacgattt tcaggctttt ccagaacatc tggaggtaag gaatcacaaa caagtgcgag
    11401 ctttcttgct gggaatcatt gaagcagaaa ttcagaggaa aaaagaactt ctaacgaccg
    11461 attatcttca gtttgaacgt ctggctgtgc taaaagccat cgatgaatgc tgggtggaag
    11521 aggtggacta tcttcaacaa cttcgcatta tcgcaagtgc cagacaggta gctcagcgca
    11581 atccagtatt tgaataccat caagaagcct ataaaggtta tcagaaaatg aaagaagaaa
    11641 tcaaacgcgg tatccttcag aacatccttc tgagcgatgt ttcctatacg gaaaagggag
    11701 agatgcaggt gtattttgct taagaaaggg ctgtaaatga ctgtctataa tatcaatctt
    11761 gggataggct gggccagtag tggtgtagaa tatgcccagg cttatcgggc tcaacttctt
    11821 cgtcgtaagg gagtggatgc caaatttatt tttaccgatt tctttggtca ggatactctg
    11881 gctgacttga cccgaaatat tgggtttgag gataaggaga ttatctggct ctacactttt
    11941 ttcacggatc aaaagattgc tccgattagt tatacgctag accagcttcg ggaagatgtt
    12001 gctgggaata ttactagaga ggaacgggac gggaagattg tgcgtttctt ctatgaggaa
    12061 caggacttat ttctgacagc ctatctgcgt caggaagatc aagacctagt acatcgtgtc
    12121 gaatacgttt ctagaggaat gctgattcgg aaggactttt tcacctatat gagaagtttt
    12181 agtgagtact acactccccg tgataacagg gctcatctct atctccgtcg ctactttaat
    12241 gaagatggtt cggttgccta tgaagaggta attgatggtg aaaactctgt ctaccgcatg
    12301 ccagatgcca tcctttcttc caaggatgaa tggattgcct attttatgca gcaattgcag
    12361 ctgactgcca aggatattgt catcttggac cgtgcgacag gtacaggaca ggccgttttt
    12421 gccaataaag gcccagctag gctaggagtg gtcattcacg cagaacacta tagccctaat
    12481 agcttgacgg accaaacgat actttggaat aacttctatg actaccagtt tgttcatgca
    12541 gatagtgttg atttctttat cacctcgacg caacggcaga aggaagttct agaagaacag
    12601 tttgctcgtt atgtgggcaa ggttccccgt gtgcttgata taccggtagg aagcattgat
    12661 actatacgtc attcggaaaa gagaaagccc tactccatga ttacagcttc acgtttggct
    12721 acggaaaaac atgtagactg gctgaccaag gctgtgattg cggcaaagaa acacctgcca
    12781 gaattgacat ttgatatata tggcagtggt ggcgagcaag gtaaaatcga aactatcatt
    12841 aaggagtatg gtgcagagga ctatattcag ctaaaaggtc atcaggattt gacagaggtc
    12901 tatcaggatt atgagcttta tcttacagcc tcaaagagcg aagggtttgg cttgaccttg
    12961 ctagaggcta ttggtgctgg tttgccgctt attggttttg atgctccata cggcaaccag
    13021 acctttattc aagatgggct caatggctat ctcttgcctt ttccacaagt agaagatgag
    13081 aaggaaattg ttgcccagta ttgtcaggct attcgcattt tctttagcca agaaaatcgt
    13141 caggccatgc aggaagcctc ctaccaagtt gcttctaaat ttttaaccta tgaaattgag
    13201 aaaaagtggc tagacttagt agaggaggtt gcacaatgat tcatttattt gatagctatc
    13261 atcaaggaag ttgggatttg cactattccc tactgtgctc gggttatcat aatccgacta
    13321 ttgtccttaa tgatgacggt tttctacctc acgatgtgac ctcgccttat cgttttttta
    13381 cccagtatga gcagatggaa ggtcatgcct tgtatttcaa tcaactacaa actccggctt
    13441 tttgggaaat tcgaggtgat aatagccagg ctgctattta taattttgcc aataaacgtg
    13501 cccagattca ttacgcccat ccaagccata agcgcttaat caatgcagtg gattggtatg
    13561 atgaggctgg gcgaattgtg gtaacagacc gttacaatga taaaggagtt cgttttggtc
    13621 agactagtta tgacaggcag ggacaggcta ctcagactag ctattatggt ctcaaggggc
    13681 aagaagtctt ggttgaaaat catgaaacgg gcgacctgat tttgaattat caaaaccgta
    13741 tctacttttt caaaacgaag catgaatgga ttgctttcta tctaaaggag gcaggttttg
    13801 agttagaccg tattatttac aatagcttgg gtttatcctt cttgacgact ttctatctca
    13861 atgaagatgg tgaagatatt cttttctggc aggaaccaat tcatgatagc attccaggta
    13921 atatgctcct attgctcaat cagcagagca gacgaccaag caaggtagtt gtacaggata
    13981 aggccactta tgaacgcttg ctagaattag ccagttcgga acagagggaa cagattgttt
    14041 atttgggttt cctctatcct ttcaaggaga aaaagaagtt gaaaccagaa gccttaattt
    14101 taaccaattc tgatcaaata gagcaattgg ataacttgat tacaggtttg cccaatcttc
    14161 attttcatat tggtgccatt acagagatgt ctagtcattt gatggctgtt ggtaatcatg
    14221 ccaatgtgac tctttatcca aatatttcca tggatatggt gagggacttg tatcagaaaa
    14281 ccagtatcta tctggacatc aaccatggtg gcgagatttt atcagctgta cgaactgcct
    14341 ttgaacatcg cttgttgatt tttgcttttg gtgaaactgc tcacgccaag atctatgtgg
    14401 ccaaagaaaa ttgttttagt tccttgcagg tagaggtctt agttgctaaa atccagaatc
    14461 ttctgactga gtcaggagaa gaagcaaacc gtctattgac ttgtcaggaa gaagaggcta
    14521 atttagttga tgttgctgct tatcagcgtt tgataggata ggagaaacta tgaccagaaa
    14581 acatcctttg agagaacgaa ttgaacaacg cttggaagaa gagcggtatg ttcttcctaa
    14641 aaaaaagaaa aaaaagagag gctttgattt tcatatcatc attattctct cggtgctgat
    14701 tagtttgggt ttgattattt ttaggattat tcaattcttt tttgataaat agataaggct
    14761 tggttgatcc agcctttttc ttattgtcaa ttatcagttt atctttgatt acttcgacgt
    14821 gcgaggaaac gtcgtatcct tatttccaac tgctagagat ttagccttct gggtgggagt
    14881 gggaagaact cgacccttca tagaagagtt cgtcaacaag cctatatttc tatttgttga
    14941 gctgaaacag tctattccca gactgttaaa gccaatcaac ctctgcgctg agatgttgac
    15001 actaactttg agaagcggtg ctgggcttga gctcagcctc tgtaataatg agagttctga
    15061 taagaaacga agtagcaaga ttcgacatgg ttattcatat ttagaagaaa tgtttatgcc
    15121 gacctacttt cactgtcaaa aaaaagccct agagagccga ttataacaaa ttcaaagtcg
    15181 acgtggttca caaaaagcaa tcattgtccc tgtatgtcaa gtattaaaag caacttttgc
    15241 tatttaaaaa aaacaaacga aatatcctga atttttagca cagaaaaaga ctactaggga
    15301 agatctagta atctagttat aaattttttg gctttgattc tatcataggg agggaatgtt
    15361 atattccttt agttgtggta tcagaagtcg acaactaaaa agagtttgag gctgggcaga
    15421 aagtccagcc tcgcttctca gagttcgtct tcccactccc agttgtatgg tttatttcta
    15481 gactgttttt agttccactc taaacgccta aaatcctgca accaattgac tgcgaagttg
    15541 ttcgactagg gagaggggaa gagttgtaca gcgagcaata atatcattat ccaagccttc
    15601 tgctaataaa cgctgggcaa attccaggcg ttctttttgt tccgctttcc cccaagcttc
    15661 ttcccaagct tcttctcgtg cctcacgtag ggatgagtag tagagttctt ctctgtcaaa
    15721 ttctctgtcc cacatatctt gttcctcctt ggtccatgtt ctgcctaact acccacctgt
    15781 cgccaattga ctacgaagtt gttcgactag ggagagggga agagttgtat agcgagcaat
    15841 cgcatcatta tctaaaccat ctgcaagcaa acgctgggca aattccaggc gttctttttg
    15901 ttcagtttct tcccgtgctt cttcccaagc ttcttcccaa gcttcttctc gtgcctcacg
    15961 tagggaagag tagtagagtt cttctctgtc aaattcttta tcccacatgt cttgttcctc
    16021 cttggtccat gttgtgtagt ctagggcatg ttctgcctgt gaaataatct tgtctggttg
    16081 gatagtgaag tctcggtttc cgaaaaattc aaaccatttt ttcaagtcgt attctgagat
    16141 agtttcgggc tggtatttgc ccaattccag aaaggcgagt ttgaccagac tgtgctgttt
    16201 gtcactgttt tttggctgga taaacagttc ttgattggtg ttttcttctc gcagggagaa
    16261 gatgtgaaag ggttggtcat cgtcaaagta attcttctcc acgagggcga ttccataaac
    16321 aggatagagc cattcgtggg tggtatgcgt gtcgccgtgt tcctgacggg catgttcaaa
    16381 attatcatgt acctgggtac agatataggt ccacaggcgg ttgatgaaaa atttttgctt
    16441 gacaatttga atttcgataa tgacctgggt gccgtcgtct agcttgacca aaatgtccgt
    16501 caccgtgtag aaaccgcggg gcgaatgatc attgggcagg ctaatctggt gaccgtccaa
    16561 gagttcaact tctgtaacag ctaggtttaa aatgtctgac acaaaggcct tggtgacttc
    16621 cttgttttga aaaatctttt tggcgactgt atcctgtgtt ggttttaagc gactatgtct
    16681 caatctacca catccttttc atttgatttc ttaatggcag agtctggcaa aacacttctc
    16741 agagttagtg tcagcatctc agcgcagtgg ttgattggca gatttgttcg tgtattacac
    16801 tccaaatctg acctaatcaa ctgtgcgggg gtgggaaaac gaactctttg ttgactagtc
    16861 gagttctttc ccactcccac ttatttattc gaaatcaaat gaaaaaaatt taaatctact
    16921 gatagggggc aggtggcgta gtgagcaata gtatcctaat gatattatag caggcagccg
    16981 tctttttttc aagagtggga agagcagttg ctggcgtgct tgtttattct tattcattta
    17041 ttcgatttaa tcaatagaga aattagaaga tgttttgtgt tggaatttac catttttttg
    17101 gtggaatcgt gattttagaa gttaaaaatg agaggctcaa ttaagctaat ttttagttac
    17161 tttagttata gtatagttat tcagtatatc ttttgaattt ttaggcttgc ttctgcgata
    17221 gatgtataca gttttcctta tttctttata ggaagtaagt cgttattctg ctggaaatag
    17281 acattagcat atttggtggg aattaatatt ttttagaaga aattcaagag gtgttttgac
    17341 tataatattt ttgtaattgt gtataaaaac aagaaaacaa agttgttctt attgatatag
    17401 ctttttattt atggtaaaat agtaattggg ttttatttca tccatatata tatatatata
    17461 tatatatgcg tgtgtgaaga aaaaagaata tttctaggga gttttcatga acaaaaaacg
    17521 atttaataag cattttgatg aaattggacg tagaagtagg gtcaaaatgc ataaatcggg
    17581 taagaactgg gtccggacgg tcttgtccca aatcagtctt ttacgcgtga ttagagggaa
    17641 ggggcaggcc aaggttactt tgccgattat tgaaacaaat gaggagctga gaagttctcg
    17701 tctggcttac ttacaggcct tgttagcctc gggggctgcc atatctggga cgacccttgc
    17761 gctgaatact tttgcagaag agcaagtcgc tgtagtggag caacaggttg atagcacaga
    17821 cacccttgtt gataaaaaca tcgtggttgt tgaaaacgtt ttaacggaag tggtttcgga
    17881 agaaagtgtt gcatcagata caggttccgc cacggctagt gaggcagggt cagtgagtgc
    17941 cagcacctcg ggttctttta gcgccagcca gtctgcttca gttagtctat ctagctcaga
    18001 gagtgctagt ttgtctgttt ctgtttctgc atcaacctct gcgagtgtct ccgtttcgac
    18061 atcagcgtca gaatctgctt caaccagtat gtctatgtct gtttctagca gcctagtaga
    18121 gggaaagacg agttcgatag gagcagtagg ttcagaaaat agtagtgaac catcaggaag
    18181 taaggtgtct gagtccagtc tggttgctgt tgagagtaga ggcgcccttt cttatgcgcc
    18241 ttcaactgat ttgcttgctc caacggatgc tttggcgcag cccgatagta ctatcgttgc
    18301 tatggctact gcaagttcgg aagttgcaac agggttagta gctactagtt tgaacagtag
    18361 ttcgtctagc cagtctgaga cagcccaaat ggctaatagt ttggattata caaacttgga
    18421 caatgccatt gctagtttgc aacatgccct ttcttatcca gaggtggatg ctacgacaac
    18481 gaccgctagc agatataaga ggtatgaaac agccctaaag gttgctaaag cagctttgga
    18541 agaatcgtta gctctaagag aagatagttc tctaggtcag gataaggtcg ataccatggc
    18601 cttgatagca ggtcaggcag ctattagcct aacaggccgt atcaatcaga ttcaggctgc
    18661 tggtgggaag tttgcgattg ctgagggaac agatgtacgt gctgttacaa aaggttcagc
    18721 aggtacagat gttagcagtt cgggggttat taattttagg actgctacag cgtcgaatga
    18781 atttaaagct ggtgctttat caactggaag tcttacttct tatgtgagtc gagtatttta
    18841 tgattataat gcagatagca atgtcttaac atataccatt acccttcaac caaaagcaaa
    18901 tggaaagatc ggtatcggaa taggaattga ttcgtcaagc acttttggac aagtaacagt
    18961 tacaggtgct actcttgaaa gtcaactgac gaatagggta ttgaatcctg gtccaactcc
    19021 aaaagggaat tattattatc tcagtaatgt tgttgccaat caaacagtaa catttcagtt
    19081 gactgttcag acaaatggta ctggtgttaa taatattcgt ctgaaaacag ctaatattaa
    19141 tacgacaaac aatagcgatt ttggcttggt ggcatctaat gttaatgacc catattactt
    19201 tataaatcct gatcaaaggc taattacttc taataataac actaaagtta tagcagcatt
    19261 tgtgtctggt ggaagtcaaa ccatctatag taagactgaa gatgcaccag ttattacaga
    19321 tggtttaacg gacaagtcta caagtatcac cggtaccggt accccctata gtacggttac
    19381 tcttaccttt tcaaacggtg ccaaaacaac tactgttgtc caagcaaacg gaacttggac
    19441 agcgacaccg ccttcgggtg caatggcagc ttctaccaca gtaagtgcag ttcaagatac
    19501 tggtaaggca tttcctgcca aagatgacgg gattcaaaat gatgttttga acagtcaaga
    19561 gaatcgtatt tctgctgcta cagtggcaac aatccgtgat actacaagac cagtagtagc
    19621 ttacccaaaa caagtgtatt ttttctacaa tacaccatta tccaaagacc ttgtccttgc
    19681 aaccgtcacg gaagtatcta attcggatac ctggcaaaag tgggggattt caagggcaga
    19741 cgatacggga actcgcgata atgaggataa tctaaacagt atgttagtag atgctaacgg
    19801 tagcccagtt agtctaggca ttcgtcaagt atcaggcaca acaaaccaat gggaaatcta
    19861 catgcctaaa ggttcgatga ttgccccaca gcatttcaat ggaagcaatc tgtccgcaag
    19921 tgagcaagac tttttcacac gatggccatt tgttgttgat gctgcaggga atcgaaatat
    19981 cttaggtaac tccgcaggta tgagattaac agctgttgct gtgccaagtg gttacatcaa
    20041 taaagcattt ggtcaaacag ctacttctac tgaaattaca aatgttgtac aaagttggac
    20101 aagttctggt cgtttctttg atggtacgag tccagctaaa agtttgactt atgttgtaca
    20161 aggtacacca ccacctacca atgttacaaa aactgttcca gtggcagtaa caacaggtga
    20221 gggacttagt acgaccgcta cggtacttgt taactatcca ccaagtttct caaacgtatc
    20281 tcagaatgtc tatgtattta gtggcgaacc aacaaaagta gataagcaag ttgctaccat
    20341 tacagagacc actggtcaga ccttcacaac gcaaacagca aatgcttcgg gtctgactgt
    20401 gaatacaagt ggtgtcatct ctacaggtca aacctttaca ggagccgttg gttcccagac
    20461 cgtcacgcta acagcaacag ataactacaa taatagtaat tcaacgacgg ttctagtccg
    20521 atcttataat gtcactggtg gtcaaccaat gacggcagaa gtggggacaa aggttactac
    20581 agaatctatt cttaaccacg tgaaagcaac agcaaccggt ggtggtactg caggtttagc
    20641 tggttctggt ttggataatc tctctagcta ttctattgtt tcaggttacg accatgaacc
    20701 aactgtcggt acaaaaacag ttcgtgttcg tgtaacattg acagatggaa actataaaga
    20761 tgttgatgtt caaatcaatt atcgagacac aaccgcaccg acagtacaac taactagtca
    20821 gcaaatatat gtctttaatg gtgagtcagt caaaattttg aatcctgcaa gtccaactgc
    20881 agataatcct gtttcgacga aaattcagtt agcaacagta acagatgcga caggagttgc
    20941 gacaacggca agtagtaatg gtgatgttca gaattcgtcg ggtagcagca atagtagagg
    21001 aatggatgtt actgtcgagg gaagttctgc tacttccaaa acggtttacc taagcggaac
    21061 accaactgtg gggaatctcc cgaacaatgg aggtcctgcc tatggttggt atggaaatta
    21121 tttgaagatt tctgatacag caaatccagc aaatacaaca acctataact caacggatgc
    21181 gagataccat ttggttgttc ttggaacgtc tgtagcgaca attgctgacc gtgatattca
    21241 gtcaccaact ttcacgcgtg ttacagaaca aaacattttg gatgttgttt cagttgactt
    21301 tgggaatgct agtgattaca acaatgcaaa caaagcaaac attcgtaagg tattgctttc
    21361 aaatacagat acagggacag taacagcagg tcaaaagaca gccgttgttc gtgtctatac
    21421 ctctacaaat acctataaag atgtgccagt cactttcact tatcgtgaca tgacggcacc
    21481 aacggcaact ctgactgcga ccagtctcta cgccttcgaa gggcaagccc tacgtgcacc
    21541 aatccaactt gcgaccctag ctgatgcgcc aaatggctca ggtttaacag gtggtcaagc
    21601 tacgactcag attgtgatgg caagttctac gacagaaaac ggcaagggtc taaccatcaa
    21661 tagttctggt caagtcagcg gtacgccaat agctggtagt caaggttcat ataccaaccg
    21721 agtccttgtt cgggataacg caggaaatac aggctattcg aatagcttta aaatgtatgt
    21781 cctgcgagct aatcctgtaa ctgcaactag agagtatact gggaataata agtttacaac
    21841 ggctgaaatc acagacctta ttaaaaatca aattgcagca gatagccgta ttagtgtcgc
    21901 ggacttgtcg gcattgacct atactattcc agaccatacc tatgcggtag gtagccagac
    21961 cattcaggcg acggtgagaa cgcctgcagg tgataccaag acggttccag tcactctgaa
    22021 ttatactgat acgaccaatc caactattac taatcgcaag gacgttacca tatttattgg
    22081 taaacagatt gagatggttg gcaatagtac ccttatccca gttacagcga cagatgtttc
    22141 cggtgttcgt tataatctga atagtgcaac ctttggtgtt actgttgatt cagcaactgg
    22201 tcaactacaa ggaactgcga caggcagtcc aggtttcaat actcgtactg ttacagttac
    22261 ggatggtcag ggtcggacga ctacttctga gaatttcaag atttatttga ttcaagcgac
    22321 cacaactacg gtgacgagag agtacggtca gacgatttca gcagatgaga ttaaaaatgc
    22381 catcacattg aatcgtggga caaacggttc tccagtaaca gtcaatatgg agttgctaaa
    22441 tgccattcca caaaatgcaa acggtacagt tcgtgtgcgt ttaacaacca gtgagggtgt
    22501 gacaactata gttgatgttc cagttgttta tacaaatgag cgaccaacta ttcaggcaag
    22561 taatcagacg attaccaaaa accgagaagg cactcctacc atgtacgatg tgacaacggg
    22621 ggtaacggtt cgtgataggg aagatgatcg ctctccaagc gatagtctgg tcactcgtaa
    22681 acgctatgaa attgttaatg ccaataatgt agttgtcaaa acagtggcag aaggtgcggc
    22741 aaccaatatt gatattaggg atttaccagc tggtaattat acagttaaga tttatgcgac
    22801 agatagcggt gctaccaatc cagttgaggg ttcctatatc ttgacagtca atgcagatac
    22861 gcaggcacca actattctca caacacagaa tgtatctgtc ttctcgggac gattgattga
    22921 aatggtttcg ggacggactt tgaaacctgt tactgctgag gatccttcag gtcttactta
    22981 tcgtttgaca gggaattcca cactaaatct ttcagttgat tcagcaactg gacaacttca
    23041 ggggacgact agtccgactg cagcaactgg tttttacacc tataacgtga cagttaccga
    23101 tagtagtgtc aatgctaatt cgagggtgtc ccctggtttc cgtatttatg ttatggggat
    23161 tactgtcacc cctatcgagc gtcaatacgg tcaaagtgtg accattgatg atgtaaaaaa
    23221 tgccgtatcc gtcaacctag caggatctac tgtgacagta gaagaagtgg tcgaaggcac
    23281 ggttccacaa gcaacaggag tggccaaact gcgtttaaca accagtgagg gtgtgacaac
    23341 tgtagttgat gttccgatta cttatacaaa cgaatcgcca gttgtgacag tgccaggagc
    23401 taagactatt ctcaaacaac cgacaggtca gccaacttca atcaatttgg cagaaggtgt
    23461 tactgtcagc gatagagaag acgaccgttc acctacagat aacctgacaa cgactgttac
    23521 ttatgagatt ttggatggca atggtcgtcc ggttatgact gttccagctg gttcttctac
    23581 aactgtagat gttggcaatc ttccggcagg ggattatacg gtacgtattt cggctcttga
    23641 cagtgacggt acgcaaacag tgacgggtag ctatcctcta cgtatcaatg acaatactcc
    23701 acctgtcatt actgcgacgg accgaacggt tgatcgtagc gatggaagtc atattgatct
    23761 ttctactggc gtaacaattc gggacactga agataatgcc tctggtacag cattgacggt
    23821 tacctataag gttgttgatt ccaagggagc tacagtctat gaaggcagag atcctaatgt
    23881 tgcatccagt ctattacagg caggagatta cactgtaact gtttctgcga cggattcgca
    23941 tggagctaag acagagaagt cctataaatt gaaagtgaca gaccgcgttt ctgtttctaa
    24001 atcagcaagt ttgtccgcct ccgagtccgc ctcaaccagt gcgtccacta gtgcctccac
    24061 gtcagcaagc gcaagtgctt ccgaatcagc ctcgactagt gcgtcgactt ccgcaagtac
    24121 gtccgcctcg acaagtgcca gcacgtctgc atcgaccagc gcaagtacgt ccgcatcaac
    24181 gtcagcaagt acgtctgc
//
LOCUS       DASFQS010000024        23323 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.024, whole genome shotgun sequence.
ACCESSION   DASFQS010000024 DASFQS010000000
VERSION     DASFQS010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23323
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.024"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..554)
                     /locus_tag="U1041_000831"
     CDS             complement(<1..554)
                     /locus_tag="U1041_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001098877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEM4767953.1"
                     /translation="MNNLKVEDCMKEELGKYLSQDPDINRILEIVKDLDLADSWICAG
                     TIRNFIWNHYRFDKNTDVDLIFYDEKISYQETKEIEANLHQRYPKYQWELKNQVFMHI
                     HSPDTSPYQSSKDAIEKFPERCTAIGVRQTKNGNLEIFAPYGLDDIYHYLVRPTPHFI
                     GNSKRMDIYKKRMKKKNWKEQWPV"
     gene            complement(747..1067)
                     /locus_tag="U1041_000832"
     CDS             complement(747..1067)
                     /locus_tag="U1041_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HEM4767954.1"
                     /translation="MAHHHDHEHDHNHDERELITLVDDQGNETLFEILLTIDGQEEFG
                     KNYVLLIPASAEEDENGEVEIQAYSYIENENGTEGDLQPIPEDATAEWDMIEEVFNSF
                     MEEE"
     gene            complement(1079..1498)
                     /gene="ruvX"
                     /locus_tag="U1041_000833"
     CDS             complement(1079..1498)
                     /gene="ruvX"
                     /locus_tag="U1041_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEM4767955.1"
                     /translation="MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIPIDEEKGEFGFQR
                     LTELVEQYKVDKFVVGLPKNMNNTSGPRVEASQAYGNLLIEQFKLPVDYQDERLTTVV
                     AERMLIEQADISRGKRKKVIDKLAAQLILQNYLDRTF"
     gene            complement(1498..1764)
                     /locus_tag="U1041_000834"
     CDS             complement(1498..1764)
                     /locus_tag="U1041_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HEM4767956.1"
                     /translation="MGFTEETVRFRLDDTDKQEISKTLTGVYRSLEEKGYNPINQIIG
                     YVLSGDPAYIPRYNDARNQIRKHERDEIIEELVRYYLKGNGIDL"
     gene            complement(1871..2269)
                     /gene="spx"
                     /locus_tag="U1041_000835"
     CDS             complement(1871..2269)
                     /gene="spx"
                     /locus_tag="U1041_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HEM4767957.1"
                     /translation="MIKIYTVSSCTSCKKAKNWLNAHQLSYNEHNLAKEAITKEEILN
                     ILTKTENGIASIVSSKNRYAKSLDFDIEDLSVNEVIDLIASNPRILKSPILIDEKRLQ
                     VGYKEDDIRAFLPRAVRNVENAQARMRAAL"
     gene            complement(2429..3580)
                     /gene="recA"
                     /locus_tag="U1041_000836"
     CDS             complement(2429..3580)
                     /gene="recA"
                     /locus_tag="U1041_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEM4767958.1"
                     /translation="MAKKPGKKLEDITKKFGDERKKALDDALKSIEKDFGKGAVMRLG
                     ERAEQKVQVMSSGSLSIDIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKDGG
                     IAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSV
                     AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTVAIFINQLREKVGVMFG
                     NPETTPGGRALKFYASVRMDVRGNTQIKGTGDKKDQNVGKETKVKIVKNKVAPPFKEV
                     VVEIMYGEGISRTGELIEIGSNLGIIQKAGAWYSYNGEKIGQGSENAKKFLADNPAIF
                     DEIDRKIRVHYGLIEGEEAPEVVTEEAPVVAEEIQDVVLDLDGGIELEE"
     gene            complement(3632..4813)
                     /locus_tag="U1041_000837"
     CDS             complement(3632..4813)
                     /locus_tag="U1041_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEM4767959.1"
                     /translation="MKAELIAVGTEILTGQIINTNAQFLSEKCAELGIDVYFHTAVGD
                     NENRLLSVLEVASQRSDLVILCGGLGPTEDDLTKQTLATFLGKNLVFDELAMAKLDRF
                     FASRPGRVRTPNNERQAQIVEGSQALQNPAGLAVGGMIEQDGVTYIVLPGPPSELKAM
                     FSESLLPLLSQSQQQLYSRVLRFFGIGESQLVTVLADLIDKQTDPTLAPYAKVGEVTL
                     RLSTKATSQEEANLRLNQLEEDILQHDKLADYFYAYGEDNSLVKTVATCLAEKRQTIA
                     IVEQGTGGLLQAELSLALADQPYFSGGKVIGQLGTESGWLSEEADCIRQELQADLGLA
                     VSVLIKPESTEDNVLAKVYLTLATTSGVSQKEIDLGGYSWQYLRQLACLQAWDFVRNT
                     L"
     gene            complement(4850..5419)
                     /locus_tag="U1041_000838"
     CDS             complement(4850..5419)
                     /locus_tag="U1041_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEM4767960.1"
                     /translation="MSRCAWVNPNNPLYIAYHDEEWGKPLHDEQSLFELLCLESYQAG
                     LSWEIVLNKRQAFRSAFFNYDIQKVAAMTDSELDILLTNPDIIRHKAKLYATRANAQA
                     FLRVQEEFGTFDTYLWEWVNFTSIDNPVKSFRELPTKNDLSERISKDLKKRGFKFVGP
                     VCIYSYLQASGLLNEHEETCEIGKKLRTN"
     gene            complement(5871..6461)
                     /gene="ruvA"
                     /locus_tag="U1041_000839"
     CDS             complement(5871..6461)
                     /gene="ruvA"
                     /locus_tag="U1041_000839"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEM4767961.1"
                     /translation="MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVRQEV
                     TVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGIGPTTALAIIAVDDNDGLVRAIE
                     QKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALDEAMEAME
                     ALGYRPAELKKIKKFFDGTNDTAENYIKSALKMLMK"
     gene            complement(6539..7186)
                     /locus_tag="U1041_000840"
     CDS             complement(6539..7186)
                     /locus_tag="U1041_000840"
                     /inference="COORDINATES: protein motif:HMM:NF014566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767962.1"
                     /translation="MVRKDRLFIAFIVLGVLSLLVKLHRYLGFSPIHSLYYQLASFVL
                     LFALGIYHYRKLLWTDFGKMWSWKLLYQFPLFYLADFLVMYGGSFLQYLIVKTFHISE
                     GIGNVTAVNKISQIVPLPIFLLIVGIIGPIVEELFYRRFLQDSLKNILNPWFAIVLQG
                     LIFGLGHAKSLDSSEIINTIPQICSGIYLGYLYHRTGNLCYPMFIHCASNLSVGY"
     gene            complement(7201..7566)
                     /locus_tag="U1041_000841"
     CDS             complement(7201..7566)
                     /locus_tag="U1041_000841"
                     /inference="COORDINATES: protein motif:HMM:NF024949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4767963.1"
                     /translation="MTHLGQLIHMERTKRQESQETLAKAIGVSRQTVLNWEKGRTLPD
                     SASLVGIAQRYHLSFDQLIGLQVKARKRRVWINYLLLLILFGLGIFVGGNATLLLPFL
                     IVFLLIGFLIQEFMLTKSL"
     gene            complement(7640..9577)
                     /gene="mutL"
                     /locus_tag="U1041_000842"
     CDS             complement(7640..9577)
                     /gene="mutL"
                     /locus_tag="U1041_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEM4767964.1"
                     /translation="MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIE
                     ISVEEAGLKMIQITDNGEGIAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPS
                     IASVSHMIIETATADSAHGLHLEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKY
                     VRSQQAELSHIVDVVNRLSLAHPEIAFALVNEGRELIRTAGTGKLRQAISGIYGIASA
                     KKMVEIEAEDLDFQISGYVSLPELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKL
                     MVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQALKEQDLIPD
                     ALENLAQSSTRPKVKAEQGILPLREPKIYYDTIRQDFFLKPDVVAEDVKPLEEDRQEI
                     VESPVENKPTSVQFAERQSVESEDQEHPNLSAKELAKLADKLDREETSTFPELEYFGQ
                     MHGTYLFAQGKTGLYIIDQHAAQERVKYEYYREKIGQVDNSAQQLLVPYIFEFPQNDA
                     LNLVHKMDALRQVGVNLEEYGANQFILREHPIWMKEEEIESGIYEMCDMLLLTDQVSI
                     KQYRAELAIMMSCKRSIKANHALDDYSARDLLRQLSHCQNPYNCPHGRPVLVHFSKSD
                     MEKMFRRIQENHTSLRELGKY"
     gene            complement(9695..11218)
                     /locus_tag="U1041_000843"
     CDS             complement(9695..11218)
                     /locus_tag="U1041_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol oxidase"
                     /protein_id="HEM4767965.1"
                     /translation="MTELDVVSDVVTHPEETYRRSRRASRRQQVQLNGEFHERVLKTK
                     YWPALVWSLVLSVFSVANPLLMPFATNIQTQNLYAGMAMANGQIPYGDFFGTSGLLFY
                     LLAFLGHRGGTFIIFGILQFIALLIAGIYFYKIVAYFSQSEHLATSSSHWFYVFIFAL
                     GFGGMYAEMFALPFLLTSVWFLVRYFENAVRDEAFILYGIDAALVFLIYPKSLILWLV
                     AGLVLFIFNIQHRQVTRGIYQLLATIFGFLLILYVVGYYAFEAQILGTAIQQTFLYNL
                     QLDFHHSYLYLDLAIVSVFLLLSGFFKNFIQMLFSFKQGRHTYIKVLLLLTFLVQCVF
                     IIGNANFQWSQLILLLPYGFAMSVVYLRDEDVEDYRGYLRRQFFLPLAICLGIIAQPA
                     YLYLVQGDLRTNREQVANYIGEQTKDSDKIYVWDNSASIYLSSQRLSAATITTAEPYL
                     NTDDNKNSLMYDINKNEAKFVVVNKTLPILDEIKTNLESQYQSVQTTDYFTIYQKNE"
     gene            complement(11409..12629)
                     /locus_tag="U1041_000844"
     CDS             complement(11409..12629)
                     /locus_tag="U1041_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEM4767966.1"
                     /translation="MLENWLNTKQGQVFHYKMEKIEYALELLGNPQFAVPVIHVAGTN
                     GKGSTIAFMRQLFQAHGMRVGSFVSPHMVSVHDRICIDSQPISDHDFQHYLQKVYDLE
                     QEVATRYEPFRYFEVMVLIMFLYFKDQQPDLALVEVGIGGLLDTTNVVAPALSLITSI
                     GMDHQDLLGSTLREIAEQKAGIIKQNVPVVLGPLCPETTAICRHIAQDKQASVHQFGQ
                     EFTYKAGQFSNTDLELSELVLSLAGHHQEENAAVALQTFLLYMASSQQAISPQLIQQA
                     LAQTSWPGRLELVAQEPKIYLDGAHNVPAIERLLEFIQEQEEPVTILFSALRRKDFQE
                     MLELLEEKLPHTALVLTSFAYDGALSEENRQGREYVENYQQFIEDWQSSEQGILIVTG
                     SLYFISEVRRIFKK"
     gene            complement(12838..13737)
                     /locus_tag="U1041_000845"
     CDS             complement(12838..13737)
                     /locus_tag="U1041_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4767967.1"
                     /translation="MNDKEFGQRVRQLRETASLTREQFCDDELELSVRQLTRIEAGTS
                     KPTFSKIQYIATRLGMGLYELMPDYVSLPERYSKLKFDVLRTPTYGNEELVEKRDAIM
                     TEIYDDYYDDLPEEEKIAIDAIQSRIDTLESGTAGFGKEILEDYFEQIFRKQKYEVND
                     LLIIRLQLEYVRLSSSDSEIFKQFLKIIEYLHGQIDIINSSDLFVLRDTLLSCVNILG
                     GKKYYEPIPKIFETVDKIIQSTQDFQKKPIVSVLKWKYALFVNKDRGEAEKHYLDAML
                     FAKLIENRELEQKIEEDWKVDNQ"
     gene            complement(14031..14441)
                     /gene="tnpA"
                     /locus_tag="U1041_000846"
                     /pseudo
     CDS             complement(14031..14441)
                     /gene="tnpA"
                     /locus_tag="U1041_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148688.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            complement(14622..15257)
                     /locus_tag="U1041_000847"
     CDS             complement(14622..15257)
                     /locus_tag="U1041_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEM4767968.1"
                     /translation="MTPTFIWDLDGTLLDSYEAILAGIQETYEQFGLPFDREEVRNFI
                     LRYSVKDLLVRDADKYDLDSDELNRVRATSLKEKNMQIPLMAGAREILDWTAEKGIQN
                     FVYTHKSDNAFQVLEDLGVRQHFTEILTSDSGFARKPSPEALLFLIEKYGLDKENTYY
                     IGDRMLDVETAVNAGIHSINLQIDGVEKNWKIVSLLGIKQILTDKYKEKQA"
     gene            complement(15325..16326)
                     /gene="ruvB"
                     /locus_tag="U1041_000848"
     CDS             complement(15325..16326)
                     /gene="ruvB"
                     /locus_tag="U1041_000848"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEM4767969.1"
                     /translation="MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIE
                     AAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVNIKQTSGPVIEKAGDLVALLNDL
                     EPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
                     RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTP
                     RIANRLLKRVRDFAQIMGDGLIDDTITDKALTMLDVDREGLDYVDQKILRTMIEMYGG
                     GPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATAKAYEHLGYPYTEK"
     gene            complement(16520..17788)
                     /locus_tag="U1041_000849"
     CDS             complement(16520..17788)
                     /locus_tag="U1041_000849"
                     /inference="COORDINATES: protein motif:HMM:NF024803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4767970.1"
                     /translation="MQVKDVEKLTGLSTKAIRLYEEKGLIEVARNPLNDYRDYSEENV
                     RQLRLIKLLRYFECSLAEIKELLSFSEEDLRSALHEKKQGINQQAEELADKVDLLTQV
                     IQDLGKKEDWLEEAQESIAFVESGEFQDLKQDLEDALLPSIWMTFLQTLMASGPILWL
                     FTRIQQGRQENLFLLTVFSLLGTIWITLIWRDYLVTWWKHRDKVRQKNRSQAWWIPIG
                     LNSLVGGLAYFVLVGWLTERFFLPSDWLFYEYSTGLGKVAIFFIMAFLIFLLGKLARL
                     VKLSWKYGLGLAGGCILLTALLISTTTAVTKDQIIDINLLAPSKEYLYSDVKSVWTGF
                     GNKLVTVNRAERQGEFSYRIQLDGKEIVFMQPTSNQDLVPADGYIELEEFDRRLMNLG
                     IPKESSIEGSQYNELDPHYLKRFLQIVENK"
     gene            complement(18115..19827)
                     /locus_tag="U1041_000850"
     CDS             complement(18115..19827)
                     /locus_tag="U1041_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767971.1"
                     /translation="MNKRLVGVLLKSLNKTMFLFGIVLSALGVGMGLFLPQFIGRLLD
                     QTYLSNLLTQPELLAGFILFFVSVYAVQALSNYFIGRSGSNALKRLQQYIYESLLTTS
                     VKDLDQYQSGDLASRLTNDMSVVLNFITVILPNFLMNGLMVMGSIYFLWTISPWLTGL
                     SLFLLPMLSMVMIPMNQRLEGYYSAYQEGLGQVSSRISHKFTTIRLMKAFQGEKHEQR
                     EMGKSFQYLSQTFEKMIRLSAVQHTLVSSLMTGFIILMLLIAGIEVTKGVMTMATLTT
                     FVLYMMQLIDPVTDIAASLNELTEFHAVSKRLVELLELKKEEQEDTELVDDASIQLEN
                     VRFSYHTDPVLNGVSVRIPEGAHVAIVGPSGAGKSTIFSLLMKYYQDYQGEIRIGQQC
                     LSDISTKEMRRLISFIPQDNTLFHGTIRENLLYGKNESVSEERIAYILKELGLSPLVA
                     ELEDGLDTRISENGTGLSEGQKQRFSIARALLLEHPIYLLDEATASLDTVTERVISKA
                     IDRLTAGKTRLTIAHRLHTVREADAILVLDKNGQVADYGHHQQLVIRSHLYNDFLKNL
                     PNAS"
     gene            complement(19830..20603)
                     /locus_tag="U1041_000851"
     CDS             complement(19830..20603)
                     /locus_tag="U1041_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767972.1"
                     /translation="MKQIFPAVFRTIWKRKETQIYLLFTLFPFIYLVTSFIEGSNFMQ
                     IHAGEGYKVSLVAFTNMMVSSADSFILPSLTLYFLAISVFRKEVDEHTMFLYRDLGRK
                     QIFWSKYLGLLATIVIFYGFFFVTSAFVHYVRVIHLPFGSPAVFDVSLAESLGNVFGI
                     VAYLLKDILSVSLATALCLYLKNITTMIIGFLVTITMMILAVIGGPIAMLFPTSYVAL
                     ANEGLTGAGLAYLGAIGVTLVYVLVFTKIAAKKFKNLEF"
     gene            complement(20609..21481)
                     /locus_tag="U1041_000852"
     CDS             complement(20609..21481)
                     /locus_tag="U1041_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4767973.1"
                     /translation="MLKINHLSKQFAGNEFYSLKDVSLEINKGEIVGLIGKNGAGKST
                     LMKLMAKSLKPSSGTITYKGTDIFSQDNLLADFGIMIDPVFYPEMTVMDNLKFYLDLH
                     GKKDLYPNIEKTLKLVELWEARNRKPKGFSFGMKQRTALAIALVAEPDFLILDEPFVG
                     LDPIGVQKLIDILKQWSSERQISMLISSHQLGELEALCSRYVYIESGELAEAFEGKSH
                     PSVLVQLDTTKNLDSVKDLLNDHVVLEGEVLEISTATPTSELNQIFGVLARQELIVKL
                     EVKENHLKEIFTKG"
     gene            complement(21474..21902)
                     /locus_tag="U1041_000853"
     CDS             complement(21474..21902)
                     /locus_tag="U1041_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4767974.1"
                     /translation="MIFILLLSLFYICLTVASSQLLLSLSVPVLLLLTYLLPPIVNSI
                     CMGLQKDKSWKAWSAGIFPTMSMIFYATFAYITSSNGQWAQFAQLHTVSDDVMSVELA
                     GELLVPSQMLFIAVVYYGVAIATYFIQQTSRQKEKGVTYA"
     gene            complement(21917..22495)
                     /locus_tag="U1041_000854"
     CDS             complement(21917..22495)
                     /locus_tag="U1041_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4767975.1"
                     /translation="MVIRYMRPVALSIALIILASISYLLATSLVLFSSSQFLQLAYLF
                     SIMVGMPVGFILLPSWLTKRYQFYKETADIKFSWKEFLLVAIAIFFINSLFIQSEEYV
                     NQFIIAICEEFLFRYLIYRILKSEYPTWLAMLVASLLFGVLLHMNYPLLDNLIIRTPL
                     GLLFSLLATCFGLQYAIGGHWIYNLLVSRFPF"
     gene            complement(22505..23233)
                     /locus_tag="U1041_000855"
     CDS             complement(22505..23233)
                     /locus_tag="U1041_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HEM4767976.1"
                     /translation="MNMFRSIFKSVIHRRDVALFYAFAGLPILVPILSKFLVGVKAEY
                     TDNFLDFLGAALSTQDGIVLPTLLLSLIISAVFRDEIDSGILFLYKDLNRTRLFNAKI
                     ISLVVMYASYVLLTVLTSAIAYFGFLNASGKVVSNDWSNVQSTLLSIFATIYINIIGV
                     LLVAMVSIKAKSLQAVLAGVFWSLFTTTAPFLIGVRYVVPNGYAQMSFNQPLLAWSLV
                     VAITTFYIVATYLKGRSNFEKLEF"
BASE COUNT         6944 a         5284 c         4277 g         6818 t
ORIGIN      
        1 attacaggcc attgttcttt ccagtttttc tttttcattc gtttcttata tatgtccata
       61 cgtttagaat taccaataaa atgaggagtt ggtcgtacca aataatgata gatatcatct
      121 aatccataag gtgcaaaaat ttcgagattc ccgttttttg tctgacggac accgattgcg
      181 gtacaccttt cgggaaattt ttctattgca tcttttgacg attgatatgg agaggtatca
      241 gggctatgga tatgcataaa tacttgattt tttaattccc actgatattt cggatatctt
      301 tgatgcaaat ttgcttctat ttctttcgtt tcttgatagg atattttttc atcgtaaaag
      361 ataagatcaa catccgtatt tttatcaaaa cggtagtgat tccagataaa attacgaatt
      421 gttcccgcac aaatccatga atctgctaag tctaaatcct ttacaatttc caaaatccta
      481 ttgatatcag ggtcttgcga tagatatttt cccaactctt ctttcataca atcctctacc
      541 ttcaagttgt tcattgattt tagttatttt ttctagcttt cttaaagaaa tcgttagaaa
      601 tatcattcta acgacaggga gcagataaaa cattcaccag acctttattc gctttcttat
      661 tttcaggctc atgataaaaa ggtccactgg acctcaattc gctttcttat tttcaggctc
      721 atgataaaaa ggtccactgg acctttttat tcctcttcca taaagctgtt gaagacttct
      781 tcaatcatat cccattctgc tgttgcgtct tctgggattg gttggaggtc gccttctgtg
      841 ccattctcat tctcgatata tgagtaggct tggatttcaa cttctccgtt ctcatcttct
      901 tctgcacttg cagggattaa gaggacgtag tttttaccaa attcttcttg accgtcaatc
      961 gtcaataaga tttcaaaaag tgtttcgtta ccttggtcgt ctaccaaagt aatcaattca
     1021 cgttcgtcgt ggttgtggtc gtgttcatgg tcatgatgat gtgccattag aatctccttt
     1081 aaaatgttct atctaaataa ttttgtaaaa tcagctgagc tgctaattta tcgataactt
     1141 tcttgcgttt tcctcggctg atatccgctt gctcaatcaa catgcgttct gccacaacgg
     1201 tcgtcaaacg ttcatcctgg tagtcaaccg gtagtttgaa ttgctcaatc aataaatttc
     1261 cataggcttg actagcctca acacgaggtc cgctagtatt gttcatgttc ttaggtaaac
     1321 cgacaacaaa tttatcaacc ttatattgtt caaccagctc agttaaacgt tgaaaaccaa
     1381 actcaccctt ttcttcatcg attgggatga tttccaaccc ttgggccgtg aaacctaacg
     1441 gatctgaaat agctacacca actgtcttag aaccgacgtc taatcccatt attctcatta
     1501 gaggtcaatc ccattccctt tcaaatagta gcgcaccaat tcttcaatga tttcatctcg
     1561 ttcatgctta cgaatctgat tgcgggcatc attatagcga ggaatataag cagggtcccc
     1621 acttaataca tagccaatga tttggttaat cggattatag cccttttcct ctagcgaacg
     1681 ataaacacca gtcaatgtct tgctgatttc ttgcttatct gtgtcatcca gacgaaaacg
     1741 aactgtttct tccgtgaatc ccatacttac accttctttc aatttttatt cattttcatt
     1801 atatcatatt tctaggacaa gcacaaagaa agtgcaaaaa gaactccatt aatagagttc
     1861 ttcctactct ttatagggct gctcgcatac gagcttgggc attttcaaca tttcgaaccg
     1921 ctcgcggtaa gaaggcgcga atgtcatctt ccttgtatcc aacctgcaat cgtttctcgt
     1981 caatcagaat tggacttttc aaaatacgtg gattagaagc aatcaagtcg atcacttcat
     2041 tgacacttaa atcttctata tcaaaatcca aactcttagc atagcgattt tttgacgata
     2101 caatacttgc aatgccattt tccgtcttgg ttaaaatatt taaaatttct tccttggtga
     2161 ttgcctcttt agccagatta tgttcgttat aggacaattg atgggcattc agccagttct
     2221 ttgctttctt acaagaagta caactagata ctgtataaat tttaatcatg tagtcactcc
     2281 tttgctacat cttagtaagc atattatagt ctattatacc acatattcca tccgtctgta
     2341 gacctatttt taaaaaaact ttaaattttt gggggaaaat tcgggttttg gtaagaaaaa
     2401 agtttggtct ccccaaactt tttcgctctt attcttctaa ttcgatgccg ccatccaagt
     2461 ccaaaacaac atcttggatt tcttccgcaa caacaggagc ttcctctgtc acgacttctg
     2521 gtgcttcctc accttcaatc aatccataat gaacacgtat cttacggtca atttcatcaa
     2581 agattgctgg attatctgct aagaatttct tagcattttc agaaccttgg ccaatttttt
     2641 ctccattata tgaataccaa gcacctgctt tttggatgat gccgaggttg ctaccaatct
     2701 caatcaattc acctgtgcga gaaattcctt caccgtacat gatttcaaca acaacctctt
     2761 taaacggtgg agccaccttg ttcttcacga ttttcacctt ggtttcctta ccaacatttt
     2821 ggtctttctt gtcgcctgtt cctttgattt gtgtgtttcc acgaacatcc atacggacag
     2881 atgcatagaa tttaagcgca cgaccaccag gtgttgtttc ggggttacca aacatgacac
     2941 cgactttttc acgtaattgg ttgatgaaaa tagctactgt cttagttttg ttgatggatg
     3001 ctccgagttt gcgcatggcc tgactcatca tacgagcctg caaaccaaca tgactatcac
     3061 caatatcacc gtcgatttct gcacgaggta caagggctgc aaccgagtca acaacaacca
     3121 agtcaaccgc accagagtcg atcagcttgc ctgcaatttc aagaccttgc tcccctgaat
     3181 ccggctgtga caagagtaac tcatcaatat tgacaccaag cgctgctgca taggctggat
     3241 ccaaggcatg ttctgcatcg ataaaggcag caataccgcc atctttttgg gcttgagcta
     3301 ctgcatgaag ggcaacagtt gtcttacctg agctctctgg accataaatc tcaatgatac
     3361 gacctttcgg atagccacct gctccaagcg caatgtcgat tgacaaacta cctgaactca
     3421 tgacttgaac tttttgctca gcacgctcac caagacgcat gacagcgccc ttaccaaaat
     3481 ctttttcaat tgattttagg gcatcatcca acgctttttt acgctcatcg ccaaatttct
     3541 ttgtaatatc ttctaatttt tttcctggtt tcttagccaa tgattttctc ctcttttctt
     3601 agtcaaacta ttatagcaaa tatctgctat ttcacaaagt gtttcgtaca aaatcccagg
     3661 cctgcagaca agcaagctgg cgaaggtatt gccacgaata accacctaaa tctatctctt
     3721 tttgggaaac acccgaggtc gtagccaaag tgaggtatac ttttgcaagt acgttgtcct
     3781 ctgttgattc cggtttgata agcacagaca cagccaaacc taaatcagct tgcagctcct
     3841 gccgaatgca gtcagcttcc tctgatagcc agcccgattc tgtccctagc tgaccgatga
     3901 cttttcctcc gctaaaatac ggctgatcag ccaaagccag gctcaattca gcttgcaaga
     3961 gaccacctgt cccctgttcg acgatagcga tggtttgtct tttctccgcc aaacaagtcg
     4021 ctaccgtttt gaccaaacta ttgtcctctc cgtaggcata gaaatagtct gccagtttgt
     4081 catgttgtaa gatgtcttct tccaactgat ttaaacgtag atttgcttct tcttggctgg
     4141 tcgctttggt ggacaagcgt aaagtcacct ctccaacttt tgcataagga gcaagagttg
     4201 ggtctgtctg cttgtcaatc aagtccgcca aaacagtcac taactggctt tcaccaatgc
     4261 caaaaaagcg taggacacgc gaataaagtt gctgctgaga ttgggacagt aaaggtaaga
     4321 gactctcaga aaacatggcc ttgagctcac ttggtgggcc aggcaaaaca atataggtta
     4381 caccatcttg ctcaatcata ccaccaacag ctaaaccagc tggattctgt agcgcctgac
     4441 ttccctccac aatctgtgcc tgacgttcat tatttggtgt acggacacga cctgggcgac
     4501 tggcaaagaa acggtctaat tttgccatag ccaactcatc aaacacaaga tttttaccta
     4561 agaaggtcgc caaggtctgc ttggtcaagt catcctcagt tggaccaagt cctccacaga
     4621 gaatgaccaa gtcgctccgc tgactggcta cttccagtac agacagaagc ctgttttcat
     4681 tatctccaac agctgtgtgg aaataaacat caattcccag ctctgcacat ttctccgaaa
     4741 ggaactgagc attggtatta atgatttgac ctgtcaaaat ctcggttccg acggcgatta
     4801 gttctgcttt catattcctc ctctgtctaa ggtgcgattg ctcgctcatc taattagttc
     4861 gtaatttctt tccaatctcg caagtttctt catgttcatt caacagacct gaagcctgca
     4921 aataggagta aatacagaca ggccctacaa acttgaaacc tcgtttcttc aaatcttttg
     4981 aaatccgctc agacaagtcg ttcttggtcg gcaattctcg gaaggatttg acagggttgt
     5041 cgatagatgt aaagttaacc cattcccaaa gatacgtatc gaacgtaccg aattcctcct
     5101 gtactcgaag aaaggcctga gcattggcgc gggtagcgta cagctttgcc ttatgacgaa
     5161 tgatgtctgg attggtcaga aggatatcta actcgctatc tgtcatggcc gcaacctttt
     5221 gaatatcata gttgaaaaaa gcagagcgaa aagcctggcg tttattgaga acaatttccc
     5281 aggaaagtcc tgcttggtag gattccaagc aaagcaactc aaacaaagac tgctcatcgt
     5341 gaagtggctt gccccattct tcatcatggt aagcaatata gagtggattg ttgggattga
     5401 cccaagcaca acgggacata gaaactcctt ttcgtgaata actaaagtgc gaatcagaat
     5461 aaactgactg aaacacggct acgatacttt gcaaaattgt caaactgaat cctaaatatc
     5521 accgaataac gcagctgaca tctggcaaaa ggcttcgtca aaactcgcct tttacctagt
     5581 tgtcattgcg gaggtctcac aacgaaattt cttgcaaaat ttctgttcgg ccgtctattt
     5641 tctctttgtc ctttacgtcc tttgtatctg gacacgacat gagccacaaa aatcgacatt
     5701 atttttgtgg cgaattagta aggtacctag gcaagccgca attatcatac tggtacgtta
     5761 attgaacacg gctacgatac cttgcaaaaa gataaagcct tcctagatgc taaagcatct
     5821 gcgttagctt tcctattttg ctgtgtatcg cttaacgcct ttgtatctta ttacttcatc
     5881 agcattttaa gggctgactt gatgtagttt tctgcggtgt cgttggtgcc gtcgaagaat
     5941 ttcttgattt tcttgagttc ggctgggcgg tagccaaggg cttccatggc ttccatagct
     6001 tcatcaagag cgatattttc actggatggt gctacttgtt gaacaggacc tgcttcttcg
     6061 ctcatgacaa acttgccttc caagtccaaa atcatctgct gggctgtttt cttgccaatc
     6121 ttcggaaact tggtcaggta ggtaatgttc ttctgctcga tagcacgaac aaggccatca
     6181 ttatcatcaa cagcaataat agccagagct gttgttggac caatacctga tactgaaatc
     6241 agactcagaa agacggattt ttcattttct gtagcaaatc cgtagagcaa atgagcatct
     6301 tcacgaatca cctgatgcgt atagaccgtc acttcttgcc ggacttgtcc tgaataggcg
     6361 taggggttag caacctgcaa gatatagcct actccttgcg tttctaccac aatgtatttt
     6421 gcagttattt ttgttaaaat tcctttaata tagtcgtaca tatacttcct ttatcgatga
     6481 taatttatgt ctttccattg tatcataaaa gcctcgctat tgacagcgag gctgagtttt
     6541 aatacccgac ggagagattg ctggcacaat gaatgaacat tgggtagcaa agattacctg
     6601 ttctatggta gagataaccc aagtaaatac ccgaacaaat ctggggaatc gtgttgataa
     6661 tttctgaact atccagagat ttagcatgcc ctaagccaaa aatgagacct tgcaagacaa
     6721 tagcaaacca tggatttaaa atatttttca gactatcctg taaaaatctt cgataaaaaa
     6781 gttcttcaac aattggaccg atgattccca ctatcagcaa aaagattgga agtgggacga
     6841 tttggcttat cttattaact gctgtgacat tgcctatacc ttctgagata tggaatgttt
     6901 tcactatcaa gtattggaga aaacttcctc catacatgac caaaaagtct gcaagataaa
     6961 acaaagggaa ttgataaagc agtttccagc tccacatttt tccaaaatca gtccaaagga
     7021 gctttctata gtggtatatg ccaagtgcaa atagcaagac aaaactagca agctggtaat
     7081 aaagactatg aatcggacta aatcctaaat agcggtgaag cttgaccagc agactgagca
     7141 caccaagaac aataaatgca ataaatagtc tatcctttcg gaccatacga tgacctcgct
     7201 ttataaagat ttggtcaaca tgaattcttg gataaggaaa ccgatgagga gaaaaacgat
     7261 gaggaacgga agcaagagag tggcattgcc accgacaaag atacctagac cgaataggat
     7321 taggagaagc aggtaattta tccagacccg ccttttccta gccttgactt gtaagccaat
     7381 taactggtca aaagagagat gataacgttg ggcaataccg actagactgg cactatcagg
     7441 taaggtgcga cctttttccc agtttaagac ggtttgacgt gacactccaa tcgcttttgc
     7501 caaggtttct tgagattcct gtcgttttgt tcgctccatg tgaataagct gtccaagatg
     7561 agtcatgttt cctcctttac tttacaagct ggcggtaaaa atagctagtc caaatgcttt
     7621 tacaggggtg ttaaaatcct taatacttgc ccaactctcg caaactggta tgattttcct
     7681 gaatgcgtct gaacattttt tccatatctg acttgctaaa atgcaccaag actggtcggc
     7741 cgtgcgggca gttataaggg ttttgacaat gggataattg tcgcagtaaa tcacgcgccg
     7801 aataatcatc caaagcatga ttggccttga ttgaccgttt acaagacatc atgatagcca
     7861 gttctgcccg atactgcttg attgacacct gatccgtcaa gagcaacatg tcgcacatct
     7921 cataaatgcc agactcaatc tcctcttcct tcatccagat aggatgttca cgcagaataa
     7981 attgattagc tccatattct tccaagttga caccaacttg acgaagggca tccattttgt
     8041 ggacaaggtt aagggcatca ttctgcggaa attcaaaaat atacggcacc aataactgtt
     8101 gagctgaatt gtcaacctgc ccaattttct cacggtagta ttcgtatttg accctctctt
     8161 gcgcggcatg ctggtcaatg atataaagtc ctgtcttgcc ttgtgcaaat aaatacgtcc
     8221 cgtgcatctg accaaaatat tctaactctg gaaatgtcga tgtttcctcc cggtctaatt
     8281 tatctgccag ttttgccaat tcttttgcgc ttagattagg atgctcctga tcttctgatt
     8341 ccaccgattg acgttctgca aattgaacag atgtaggttt attttcgaca ggcgactcaa
     8401 caatctcttg cctatcctct tcgagaggtt tgacatcctc agcgaccacg tctggtttta
     8461 agaagaagtc ttgcctaatc gtatcataat agatttttgg ctctctgagt ggtaagatgc
     8521 cttgctctgc ttttactttt ggtcgagtac ttgactgagc taaattctca agagcatctg
     8581 gtatcaagtc ctgctcttta agcgcttgac taatcgcctc tcgaatcaat gtcatgagtt
     8641 ctttttcctt ggagatgcga acttcctgct tggtcggatg cacattgaca tcagcaagat
     8701 aggggtcaat ttctatagaa atcactgcca atggaaaacg tcctaccatc aacttactgc
     8761 cgtaaccttc caaaatcgct cgattcagca aaaaattctt gatatagcga ccgttgatga
     8821 aaatggaaat gtagttgcgg ttggcgcgag tcaactctgg caaggaaacg taacctgaaa
     8881 tctgaaaatc cagatcttct gcctcaattt caaccatttt tttggcggaa gcaatcccat
     8941 aaatccctga aattgcctga cgaagtttcc ctgtccctgc agttctaatt aattctcgtc
     9001 cttcgtttac taaggcaaag gctatttccg gatgagctag actcaatcga tttacaacat
     9061 caacaatatg tgataattca gcctgttgac tgcgaacgta tttgagacga gcaggggtat
     9121 tgtaaaataa atccgaaaca gtaatctgcg taccaactgg acgactaact ggctcctctt
     9181 tctcgatgac gccacctttg gcctccaaat gaagtccgtg tgcagagtct gccgtagctg
     9241 tctcaatgat catatgactg acagaagcaa tggagggcag agcttctcca cgaaaaccga
     9301 gggtgcgaat acgaaacaaa tccgattgat tttttatctt actagtagcg tgacggcgga
     9361 gggcaagcgc tacttcatca ggggcaatcc cctcaccgtt atccgtgatt tgaatcattt
     9421 taaggccagc ctcttcaaca ctaatttcaa tctgactagc ccctgcgtca atggaatttt
     9481 ccaccaactc cttaaccaca ctggctggtc gctcaatgac ctcaccagcc gcaatctggt
     9541 tggctagtat ttctggtagt tcaataatat gtgacatcat ttctcctaca tttctttaat
     9601 aatttttccc gaatgcttat ttttccatta taccacatat ccactttcac tccttttccc
     9661 agataagcta aagaaaaaat gactgcctga gcaatcattc attcttttga taaatcgtaa
     9721 agtaatccgt tgtctgaaca gactggtatt gtgattctaa atttgtcttg atttcatcta
     9781 gaattggtaa agtcttattg acgactacaa attttgcctc atttttattg atgtcataca
     9841 tcaagctatt tttattgtcg tcagtattca gatagggttc tgctgtagta atcgttgcgg
     9901 cagataaacg ttgacttgaa agatatatac ttgcgctatt atcccaaaca taaatcttat
     9961 ccgaatcttt tgtttgttca ccaatgtaat tggcaacttg ttcacggtta gttctcaaat
    10021 ctccctgtac caaataaaga taagcaggtt gagcgataat acccaagcaa atagctaacg
    10081 gaagaaagaa ttgacgacgc aaatacccac gataatcttc tacatcctca tcacgcaggt
    10141 aaacgactga catcgcaaaa ccatacggta aaagaagaat gagttggctc cattgaaaat
    10201 tagcattccc aataataaag acacattgaa ctaagaaagt caataatagg agaactttga
    10261 tataggtatg tcttccttgt ttgaaagaaa acagcatttg gatgaaattt ttaaagaatc
    10321 cagataagag taaaaataca gacacaatcg ccaagtctaa atatagatag gaatggtgaa
    10381 agtctaactg taagttataa aggaaagttt gttgaatagc tgtccccaga atctgcgcct
    10441 caaaagcata ataacctacc acatatagaa tcagaagaaa accaaaaatg gtcgctaata
    10501 attgataaat tcctcgagta acttggcggt gttggatatt aaaaataaat aaaactagac
    10561 ccgcaactaa ccaaaggatc agactttttg ggtaaattaa aaataccaat gccgcatcga
    10621 ttccgtagag gataaatgcc tcatcacgca ctgcattttc aaaatagcgg accagaaacc
    10681 acacactagt caaaagaaac ggaagagcaa acatttctgc atacatccct ccaaaaccaa
    10741 gtgcaaaaat aaatacatag aaccaatgac tagaacttgt cgctaggtgt tctgactgac
    10801 taaaataagc tacaatctta tagaaataga ttcccgctat cagtaacgct ataaactgga
    10861 ggattccaaa gataatgaaa gtccctcccc gatgacctaa gaaagcaagt aagtagaata
    10921 ataacccgct tgtaccaaag aaatcaccat aagggatttg tccatttgcc attgccatcc
    10981 ctgcatataa attttgagtt tgtatattgg ttgcaaatgg cattagcagt ggattggcta
    11041 cgctaaaaac acttaaaact aagctccaaa caagagctgg ccaatacttt gtctttaata
    11101 ctctttcatg aaattcacca ttcagttgca cttgctgtct gcgggatgct ctacgactac
    11161 gtcgataagt ttcctcagga tgagtaacta cgtccgaaac tacatctaat tctgtcattt
    11221 tcttctcctt ggatttgctt tccttattat atcaaaaagc actcccgatg tcatttccta
    11281 tcgggagttc tggaaatttt tgcaaactgc tctaattgac ggaaggtatg gcgtttggtt
    11341 ttttcaaatt cctttaaaaa ggctactgtt tctgcatgtg tcataccttt ttattcgcaa
    11401 aaagatattc attttttaaa aatccgacga acttctgaga taaagtagag agagcctgtg
    11461 acaatcaaaa taccttgctc gctagattgc cagtcttcta taaactgctg ataattttca
    11521 acatattctc gaccttgacg gttttcctca gacaaggcac catcataagc aaagctggtt
    11581 aatacaaggg cagtatgtgg taatttttct tccaataatt caagcatttc ttgaaagtcc
    11641 ttgcgccgaa gggctgaaaa gagaatagtg acaggttctt cttgttcctg aataaattca
    11701 agcaaacgtt cgatagctgg gacattgtgg gctccgtcta aatagatttt tggctcttga
    11761 gcaaccaatt ccaaacgacc aggccagctg gtttgggcaa gggcttgttg aatcaactga
    11821 ggagaaatcg cttgttgact acttgccata taaagcaaaa aagtttgcaa ggcaacggcc
    11881 gcattctctt cttgatgatg gcctgccaga ctcagaacta attctgacag ttccaagtcc
    11941 gtattgctga actgtcctgc tttgtaggta aattcctgac caaattggtg gacagaggct
    12001 tgtttgtctt gggcaatgtg gcgacagatg gctgtggttt ctggacaaag tggtccaagg
    12061 acgacaggta cgttttgctt gataatccct gctttctgct ctgctatttc ccttaaagtc
    12121 gagcctagta aatcctgatg gtccatgccg atggaggtga taaggcttag agctggtgcc
    12181 acgacgttgg tcgtatccaa aagtccgcca atccccacct ctactaacgc caaatcaggc
    12241 tgttggtcct tgaaatagag gaacataata agcaccatga cctcaaaata gcgaaaaggc
    12301 tcataacgag tggcgacttc ctgctccaag tcgtagactt tctgtaaata gtgctgaaaa
    12361 tcatggtctg aaatgggctg actgtcaata caaatcctgt cgtgcacact caccatgtgg
    12421 ggggatacaa aacttccaac acgcatacca tgtgcctgaa atagctggcg cataaaggca
    12481 atggtcgacc ccttgccatt ggttccagct acgtgaatga ctggcactgc aaactgggga
    12541 tttcctagca gttctaaggc atactcaatc ttttccatct tgtaatgaaa aacctgacct
    12601 tgtttggtgt ttaaccaatt ttctaacata gccacctcct atatattgtc tagtatagca
    12661 aaaaaagcca tacggatgtt ggctttttga taatattatt cttcaaccca agtcccccag
    12721 ttaccaccaa gacgaccaaa aaatttcaaa aagttaaaca tatcactaat ctcctttaat
    12781 ctttatgagt ttagtataat agttttttct gtccttcaac aggacaaaaa tgtcacttta
    12841 ttgattgtca actttccaat cttcttcaat cttctgttct aactctctat tttctatcaa
    12901 ttttgcaaat agcatcgcat ctaggtaatg tttttcagcc tcacctctat ccttatttac
    12961 aaaaagtgcg tacttccatt tcaacacact gacaattggc tttttctgaa aatcttgcgt
    13021 tgactgtata attttatcta cagtttcgaa tatttttggt attggttcat aatacttttt
    13081 gcctcccaaa atatttacac aagataacaa tgtgtctcgt aaaacaaata gatcactcga
    13141 attgataata tcaatttgtc catgtaaata ttctataatt ttcaaaaact gtttaaatat
    13201 ttctgagtca ctactggaca atctaacgta ttcaagctgg agcctaataa tcagtaaatc
    13261 attcacttcg tacttttgtt ttcgaaaaat ttgttcaaag taatcttcca gtatctcttt
    13321 cccgaagccc gctgtccctg actctaaggt gtcaattcgg gattgaatgg catcaatcgc
    13381 tattttctcc tcctcaggca agtcatcata atagtcatca tagatttccg tcatgatagc
    13441 atcacgtttt tcaactaatt cctcgtttcc ataagtcggt gtacgaagta catcaaactt
    13501 cagtttggaa tatcgttcag gtagcgacac gtaatctggc ataagctcgt agagccccat
    13561 gcctaagcgg gttgcgatat attggatttt tgaaaaagtc ggcttggaag tgcctgcttc
    13621 gatacgggtt aattggcgga cggagagctc aagttcgtca tcgcaaaact gttcacgtgt
    13681 cagactagcg gtttctcgaa gttgacgtac acgttgtcca aattccttat cgttcataaa
    13741 atacctccga atatactttt atcaattata gcaaaaaact tatacaaact ccatactatc
    13801 taaccaaagt cataaccacc cgtgaaaacg ggtggcttgt acaccggcta taagtcgttt
    13861 ctccccatcg acgtctaaag acgttcgctg aacttcgttc aggttagtgc tataattact
    13921 tgactaatgc ccgtaacaac gggcttttat cttgttctaa aactgccatc tgaaaatgga
    13981 ttttcatact ctttgacact caatttatca agtgcaatgt cattgaacaa ctaatctccc
    14041 agattagttg tttactcgcg aatatatttc gcaactgtat tttcgttcag cccaaccgta
    14101 ctaacatagt agcctctagc caaaaacttt cgatttccgt acttatattt caaattagcg
    14161 tgtttatcaa atatcattag agcactttta cttttcaaat atcccataaa atcggaaatc
    14221 gaaagttttt ggggtatcaa gacaagcata tgaacatggt ctggcatcat gtgtccctca
    14281 atgatttcca cgcctttgta tcgacataga tgacggaaaa tatcaattaa gtcctgcctt
    14341 attttgtagt aaatggattt tctacggtac ttaggtgtga aaactatgtg atatttgcac
    14401 atccatttgg tatgtgataa actgtaactg gttttagcca tgctaaacta gtccactgga
    14461 ctagtttact cctccttatc taacctgaac aattagatta taacaggaaa aagaaatgga
    14521 ggctcaaagc cttggcagcc accagcatag ctggtggttt tcttttgttt ttctctacga
    14581 gaaaaactgg ctcgaagcca taacaaaaaa aacaaacggt tttacgcctg tttttcttta
    14641 tatttatcag ttaatatttg ttttatgccc aaaagagaaa caatcttcca attcttctcc
    14701 acaccatcaa tttgcaaatt gatactgtga attcctgcgt tgacagccgt ttccacatcg
    14761 agcatacgat caccgatata gtaggtattt tccttgtcca gtccgtattt ttcgatgaga
    14821 aatagcagag cttctggact tggtttgcgg gcaaaaccag aatcgcttgt caagatttct
    14881 gtgaaatgtt gacggacacc caaatcctcc aaaacctgaa aagcattgtc actcttgtgt
    14941 gtataaacga aattttgaat tcctttctct gctgtccagt ccagaatttc acgcgcacca
    15001 gccatcaaag gaatctgcat atttttctcc ttcaaggaag tcgcacgcac acgattaagt
    15061 tcatcgctat ccagatcgta cttatccgca tcacgcacca gcaaatcctt gacagaataa
    15121 cgaagaatga aatttcttac ttcttcacgg tcaaaaggaa ggccaaactg ctcataggtt
    15181 tcctgtatac cagccaaaat cgcttcatag gaatccaaga gtgttccatc caaatcccaa
    15241 ataaatgtcg gtgtcatctt atctccattc ctaaattgat ttgtaatcgc aataagtttg
    15301 ttactcatct catctgctct gccattattt ttccgtatag ggataaccca agtgctcgta
    15361 ggccttggct gtagcaaccc gccccgtccg tgtccgcatg aggaagccct gctgaatcag
    15421 gtaaggctcg tacatgtcct ccaccgtctc acgctcctcg gcaatattga ccgacagggt
    15481 gttgaggccg acaggaccac cgccatacat ctcaatcatg gtacggagaa tcttctggtc
    15541 cacatagtcc agcccctcgc ggtccacatc cagcatagtc aaggccttgt ctgtaatggt
    15601 gtcgtcaatc aggccgtcac ccataatctg tgcgaaatcc cgcacccgct tgagcagacg
    15661 gttggcgata cggggagttc cacgagaccg acgagccagc tcgatagcgg cttcatgagt
    15721 aatctccata tcaaagatat ccgctgtccg ctcgacaatc tccgtcaaat cagccagttc
    15781 atagtattcc atgtgaccgg taataccaaa acgggcccgc agaggattgg acagcatacc
    15841 cgcacgagtg gtcgctccaa tcagagtaaa aggtggcaac tccaaatgca cggagcgact
    15901 ggcctcccct gctccaatca tgatgtcgat gtagaagtct tccatggctg agtagagaat
    15961 ctcctcgacc gccatgggca tacggtggat ttcatcgata aagaggacgt cgccaggctc
    16021 caagtcgttg agaagggcca ccaagtcacc tgctttttca ataacaggac cactagtctg
    16081 cttgatatta acgcccaatt cgttggcgat gacaaaggcc atggtggtct tccccaaacc
    16141 tggaggtcca aacagaaggg tatggtccaa ggcttcatca cggagcttgg ctgcctcgat
    16201 aaagattttc agctggtcct taaccttgtc ctgaccgatg tattcattta atttctgcgg
    16261 acgcagggta cgctcaacat actcctcgtc ctgcatttgt tccatatcta aaattcgatt
    16321 tgtcatgaaa ccattatagc acaaaatgaa aataccagac tcaatgagtc cagtattctc
    16381 aggagattat atgataccta gctcttgtag cttgcgactt agagctaggg acacctttag
    16441 gtgaaaagaa atttcgctat ttctagcttg gatatagtat aactcgccaa gcttaaggga
    16501 aactaaaaca gaattcattt tatttatttt ccactatttg caaaaatcgt tttagatagt
    16561 gcggatccaa ttcattgtac tgactgccct ctattgaact ttctttggga atgcccagat
    16621 tcattagtcg ccgatcaaac tcctctagtt cgatgtagcc atcagctggc actaaatcct
    16681 gattggaagt cggctgcata aacacaattt cctttccgtc aagctgaatg cgatagctaa
    16741 attccccttg cctttcagcc ctgttcactg tcactagctt gttcccaaag cctgtccaga
    16801 cagacttgac atcgctgtaa agatattcct tggacggagc cagcagattg atgtcgataa
    16861 tctggtcttt ggtcactgct gttgtggtag aaatcagcag agcggtcaat aggatacaac
    16921 cgcctgccag acccaagccg tatttccaag ataacttcac cagcctcgcc agttttccca
    16981 aaagaaaaat gagaaaagcc atgataaaga atatagcaac cttccccaga ccagtcgaat
    17041 actcatagaa gagccagtca cttggtagga aaaatctttc ggtcaaccag ccgacaagaa
    17101 caaagtaggc aagcccacct acaagggagt tgagaccaat cggaatccac caagcttgac
    17161 tacggttctt ctggcggacc ttgtcccgat gcttccacca agtcacgagg tagtctcgcc
    17221 agatgagcgt gatccaaatg gtgcccagga gcgagaacac agttaataag aatagatttt
    17281 cctgccgacc ttgttggatg cgggtaaata gccagaggat gggacctgat gccatcaagg
    17341 tctgtaagaa agtcatccaa atacttggca acaaggcatc ttctaaatct tgtttgaggt
    17401 cttgaaattc accgctttcc acaaaagcaa tggattcctg tgcttcttcc aaccaatcct
    17461 ctttcttgcc caagtcctgg attacctgag tcagtaaatc aaccttatct gccaattctt
    17521 ctgcttgctg gttgattccc tgctttttct catgcaaggc tgaccgcaaa tcctcctctg
    17581 aaaaagacag tagctcctta atctctgcta gagagcattc aaaatagcgg agcaacttaa
    17641 tcaagcggag ctgccgcaca ttttcctctg aataatcacg gtagtcgttg agtggatttc
    17701 tcgccacttc aatcaagccc ttttcttcat atagccgaat cgccttggtt gacaagcctg
    17761 tcaacttctc cacatctttg acctgcataa gcaacctcca tctgttttga tagtcctagc
    17821 atacactatc cccctaggga tgagtcaagg atttttgaaa aattaaataa tactcaatga
    17881 aaatcaaaat caggctagct ccaaaggttt gggaaacctt tggaggttgg agatagagcg
    17941 aacgtagttc gtttctactt atgcagatag aactctgttc cttttatatt tcaagggaac
    18001 aggctgaaaa cctcctcagg agcttttcag ccatcaaatc aagtcaacaa cggctgagtt
    18061 tgattttcga agagtataaa aaaataagaa caggagctat cgacccctgc cttactaact
    18121 tgcatttggt aagtttttta gaaaatcatt atacaaatga cttcgtatca ctaactgctg
    18181 gtgatgaccg tagtcagcca cttgtccgtt tttatctaag accagaatag catctgcttc
    18241 acgcaccgta tgcaaacggt gagcaatggt tagccttgtt ttgccagctg ttaatcggtc
    18301 aatcgcttta ctaatgacgc gttccgtgac agtatctaaa cttgctgtcg cctcatctag
    18361 caaataaatc ggatgttcta gcagcaaggc tctcgcaatg ctgaaccgtt gtttttggcc
    18421 ttccgacaaa cctgtcccat tttctgaaat ccgagtatct aaaccatctt ccaactcagc
    18481 tactaaagga gacaatccca actccttgag aatataagca atacgctctt ctgacacaga
    18541 ctcgttcttt ccatacaata gattttctct aatcgttcca tggaagagcg tattgtcttg
    18601 tggtataaag gaaatcaacc ttctcatctc cttggttgaa atatcactta agcattgttg
    18661 accaatccga atctctcctt gatagtcttg atagtatttc atcagcaaag aaaaaatcgt
    18721 tgactttccg gctccgcttg gcccaacaat cgccacgtga gctccttcag gaattctaac
    18781 cgatactcca ttcaaaactg gatctgtatg ataggaaaaa cgaacatttt ccaactggat
    18841 actagcatca tcaaccaact ctgtatcttc ctgttcttcc ttcttcagtt ccagcaattc
    18901 taccaaacgt ttagacactg catgaaactc cgtcagttca tttagggaag cagcaatatc
    18961 tgttactgga tcaatcaatt gcatcatgta caatacaaag gtggtcaagg tagccatggt
    19021 catcactccc ttggttactt ctatccccgc tataagcaac atcaggataa taaatcccgt
    19081 catcaagcta ctaaccaagg tatgttggac cgctgacagt ctaatcattt tctcaaaggt
    19141 ttgtgacaga tactgaaaag acttgcccat ctctcgctgt tcatgctttt ctccctgaaa
    19201 tgccttcatc aaacgaatcg ttgtaaattt atgactaatt ctactagaaa cctgccccaa
    19261 tccctcttga taagcagagt agtaaccctc caaccgctga ttcattggaa tcataaccat
    19321 tgacaacata ggaagcaaga agagactaag acccgtgagc cacggactga tggtccacag
    19381 aaaataaatt gaccccataa ccatcaaacc attcatcaag aaatttggaa gaataacggt
    19441 gatgaagttc agaacaaccg acatatcatt ggtcaaacga ctagcaagat cgcctgattg
    19501 gtactgatcc aagtccttta cagatgtagt caacaaggat tcataaatat attgttgcaa
    19561 ccgtttgagt gcattactac cactacgccc tatgaaataa ttagatagag cctgtactgc
    19621 atagaccgat acaaagaaaa ggatgaatcc tgccagcaat tctggctgtg ttaatagatt
    19681 gctcaaatag gtttgatcta gcaacctacc aataaactgg ggcaggaaca aacccattcc
    19741 aaccccaagt gcactcagaa ctatcccaaa caagaacatc gttttattga gcgacttcaa
    19801 caacactccg acgagtcttt tattcataac tagaactcca aattcttgaa ttttttcgca
    19861 gcaattttag taaatacgag tacgtaaaca agcgttacac caatagcgcc caagtaagcc
    19921 agccccgctc ctgtaagacc ttcgttggcc aaagctacat aactagttgg aaaaagcata
    19981 gcgattggac cgccaataac tgctaaaatc atcatcgtaa tcgttaccaa aaatcctata
    20041 atcattgtgg taatgttttt caaatatagg caaagagcag ttgccaaact aaccgagaga
    20101 atatctttca atagataggc aacaatacca aatacattac ccaggctctc tgctaagcta
    20161 acatcaaaaa cagctggact accaaaaggc agatggatta cccgaacata atgtacaaat
    20221 gcagaggtta caaagaagaa accatagaaa ataacaattg ttgctagtag accaagatat
    20281 ttagaccaga aaatctgctt ccgcccaaga tcccgataca aaaacatggt atgttcatct
    20341 acttctttcc taaagacaga tatagccaag aaatacaggg tcaaactagg aagaatgaaa
    20401 ctatctgctg agctcaccat catattcgta aaggcaacaa ggctgacttt atagccctca
    20461 ccagcatgaa tttgcataaa attcgaccct tcaataaatg aagtgactag atagataaaa
    20521 ggaaacaaag tgaacaggag ataaatctgc gtctcctttc gcttccaaat cgttctaaag
    20581 acagctggaa aaatctgttt catactcact accctttcgt aaagatttct ttcaagtgat
    20641 tctctttcac ttctagtttc acaatcaatt cttgacgagc cagcacacca aaaatctgat
    20701 tgagctcact tgtaggtgta gcagtggaaa tctctagcac ttccccctct agcaccacat
    20761 ggtcattgag caagtccttc acagaatcta agtttttagt cgtgtccaac tgcacgagca
    20821 cacttggatg agatttgcct tcaaaagcct ctgccaattc tcccgattcg atatagacat
    20881 agcggctgca caaggcctct agctcaccta gttggtgact cgaaatcagc atggaaattt
    20941 gtcgctcact agaccactgc ttcaagatat caatcaattt ctgaacacca atcgggtcca
    21001 agcccacaaa aggctcatct aagatcagga aatcgggctc cgcaaccaag gcaatcgcca
    21061 aagcagtccg ttgtttcata ccaaacgaga atcccttggg tttccgattg cgagcttccc
    21121 ataattctac caatttcaaa gtcttctcaa tatttggata gaggtctttt ttcccatgca
    21181 ggtccaaata aaacttgagg ttgtccataa cagtcatttc tggatagaag acgggatcaa
    21241 tcataattcc aaagtctgct aacaaattat cctggctaaa aatatccgta cccttataag
    21301 taatggttcc cgaacttggt tttagggact tagccattag tttcatgagc gtggattttc
    21361 cagctccgtt tttcccaatc agaccaacta tctcgccctt attgatctcc aaactcacat
    21421 cttttagtga gtaaaattcg tttcctgcaa actgttttga taaatgattg attttaagca
    21481 taagtaactc ctttttcttt ctgacgactt gtttgttgga taaagtatgt agcaatagct
    21541 acaccataat acactacagc aataaataac atttgtgatg gaaccagtaa ttcgccggcc
    21601 agttcaacac tcatgacatc atctgaaact gtatgcagtt gagcaaattg agcccactga
    21661 ccattgctac tcgtaatgta ggcaaaagta gcataaaata tcattgacat tgttggaaaa
    21721 atgcccgctg accatgcttt ccaagactta tctttttgta atcccataca gattgaattg
    21781 acgatgggcg gtagcaaata agtcaacaac aataaaacag gaacagagag acttagcaat
    21841 agttgcgagc tagcaactgt taaacaaata taaaatagac tcaataatag aataaatatc
    21901 atcataaccc tcacaattaa aatggaaatc tcgaaaccaa cagattgtag atccaatgtc
    21961 ctccgatagc atactgcaag ccaaaacaag tagctaacag agaaaacaat aaacctagtg
    22021 gagttcggat gattagatta tccagcaagg gataattcat gtgtagcaga actccaaaca
    22081 agagagaagc gaccaacata gctagccaag taggatattc actttttaga atacgataga
    22141 taagataacg gaacaagaat tcttcacaaa tcgcaataat aaattgattc acatattctt
    22201 cactttgaat aaacaaagaa ttgatgaaaa agatagcaat ggcaacaaga agaaattctt
    22261 tccaactaaa ctttatatcc gccgtttctt tataaaactg atagcgtttt gtaagccagg
    22321 atggaagtag aataaaccct actggcattc caaccataat agaaaatagg taggctagct
    22381 gtaaaaattg actggagcta aataaaacca aagatgttgc cagaagataa gaaattgatg
    22441 ctaaaataat caaagcaatg gataaggcaa ctggtctcat ataacgaatt accataacat
    22501 acctctaaaa ttccaacttt tcaaagttcg aacgaccttt aagataggta gcaacaatat
    22561 aaaatgtcgt tatagctact accaaggacc atgcaagcag tggctgatta aaactcatct
    22621 gagcatagcc atttggtacg acataacgaa ctccaatcag aaatggtgca gttgttgtaa
    22681 atagcgacca aaaaactcct gctagaactg cctgtaagga tttggcttta atagaaacca
    22741 tggcaaccaa taaaacaccg ataatattga tgtagattgt tgcaaaaata gatagcaaag
    22801 tggactgtac attactccaa tcattcgata ctacttttcc agaagcattc aagaagccaa
    22861 aataagcaat cgcacttgtc agcactgtta gaaggacata agaggcatac atcaccacta
    22921 aactaatgat ttttgcatta aaaagtcggg ttctattcag atctttatat aaaaatagaa
    22981 tgccactatc aatctcatcc ctaaaaactg cggaaattat caaggataac agcaatgttg
    23041 gtaacactat cccatcctgt gttgacaatg ctgctcctag aaaatctaaa aaattatccg
    23101 tatattcagc ctttacgcct accaaaaatt tggacagtat aggaactaag attggtaaac
    23161 ccgcaaaagc atagaacaaa gcaacatccc ttcgatgtat caccgactta aaaattgacc
    23221 taaacatatt catattattt cccctttttt atcaataaga taggcattaa ccaataatac
    23281 ccatcttatt gatagctaaa caatattagc tatcaataag ttt
//
LOCUS       DASFQS010000025        23246 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.025, whole genome shotgun sequence.
ACCESSION   DASFQS010000025 DASFQS010000000
VERSION     DASFQS010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23246
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.025"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            297..767
                     /gene="rimP"
                     /locus_tag="U1041_000856"
     CDS             297..767
                     /gene="rimP"
                     /locus_tag="U1041_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEM4767977.1"
                     /translation="MSSIIELVTAAITPAIQTPYELVDVEYGKMGGDYVLSIFVDKEG
                     GISLQDTADLSEKISPILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIH
                     VKLYQAIDKIKVFEGTLLSFDGTDLIMEYMDKTRKKEVTIPYQTVAKARLAVKL"
     gene            841..1983
                     /gene="nusA"
                     /locus_tag="U1041_000857"
     CDS             841..1983
                     /gene="nusA"
                     /locus_tag="U1041_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEM4767978.1"
                     /translation="MSKEMLEAFRILEEDMGINKADIIDAVTESLRSAYKRRYGQSES
                     AVIEFDEKKGDFHVFTVREVVDEVFDSRLEISLKDALAISSAYEMGDKIKFQEDPAEF
                     GRVAAQSAKQTIMEKMRKQKRAITFNTYKQHENEIMSGTVERFDNRFIYVNLGTIEAQ
                     LSKQDQIPGEVFQSHDRIEVYVYKVEDNGRGVNVFVSRSHPEMIKRLMEQEIPEVYDG
                     TVEIMSVAREAGDRTKVAVRSHNPNVDAIGTIVGRGGSNIKKITSKFHPARYDAKNDR
                     MIPTEENIDVIEWVADEAEFIYNALAPAEVDQVLFDTEDGKHATVVVPDDKLSLAIGR
                     RGQNVRLAAHLTGFRIDIKSASEYEAFEATQYATDEVVEEVAEEQE"
     gene            2000..2296
                     /locus_tag="U1041_000858"
     CDS             2000..2296
                     /locus_tag="U1041_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006531117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HEM4767979.1"
                     /translation="MAKARKIPLRKSVVSGEIIDKRDLLRIVKNKEGQVFIDPTGKAN
                     GRGAYIKLDNTEAAQAKKRRVFDRSFSMEVAEEFYDELIAYVDHKIKRRELGLE"
     gene            2253..2591
                     /locus_tag="U1041_000859"
     CDS             2253..2591
                     /locus_tag="U1041_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ-related RNA-binding protein"
                     /protein_id="HEM4767980.1"
                     /translation="MLIIRSRGENLDSNKRQKILNLLGLAQRAGRLVSGEDLVVEAIQ
                     KGQAKLVFLAEDAAGNLSKKVTDKSRTYQVEVVTVFSTLELSAAVGKARKVLAVTDAG
                     FTKKMRSIME"
     gene            2609..5410
                     /gene="infB"
                     /locus_tag="U1041_000860"
     CDS             2609..5410
                     /gene="infB"
                     /locus_tag="U1041_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEM4767981.1"
                     /translation="MSKKRLNEIARELGVSSKEVVAKAQELGFEVKSHASSVDEASAK
                     RLAESFGGQKSEATKVAAKVSQPEKVDETPKVETAKVEKAKETQPVVKEEVAASAVQS
                     APHRPQSRNFKAEREARAKEQAAKRAQGKGGQGKQNQDRRDNRQQGQSRPNNDRNDRR
                     DNRREQGSDKRKDNRFGDRRDNRDNRSGQSARFEQRAAAKPAGPKIDFKARAAALKAE
                     QNAEYARTSEERFRQAQEAKKQPKKPKEIKFEEPVVESKPFVKPAPVASVPEQVAETT
                     VDTRRKKQARPDKKRDFNSDEEDGPRKQQRNRNSQNQVRNQRTSNWNNNKKNKKGKAN
                     QPAKPVTERKFHELPTEFEYTAGMTVAEIAKRIKREPAEIVKKLFLMGVMATQNQSLD
                     GDTIELLMVDYGIEAKEKVEVDNADIERFFVEEGYLNEEEMTERPPVVTIMGHVDHGK
                     TTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMRARGASVT
                     DLTILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVI
                     STAWGGESEFVEISAKFNQNIDELLETVLLVAEIQELKADPTVRAIGTVIEAHLDKGK
                     GAVATLLVQQGTLNVQDPIVIGNTFGRVRAMTNDLGRRVKTAGPSTPVSITGLNETPM
                     AGDHFAVYEDEKSARAAGEERAKRALLKQRQATQRVSLENLFDTLKAGEVKSVNVIIK
                     ADVQGSVEALASSLQKIEVEGVRVNIVHSAVGAINESDITLAEASNALVIGFNVRPTA
                     EARSQAEADDVEVRLHSIIYKVIEEMEDAMKGMLDPEYEEKIIGEAIIRETFKVSKVG
                     TIGGFMVVRGKVTRDSSVRVIRDGVVVFDGKLASLKRYKDDVKEVGNAQEGGLMIENY
                     NDLKVDDTIEAYIMEEIKK"
     gene            5566..5919
                     /gene="rbfA"
                     /locus_tag="U1041_000861"
     CDS             5566..5919
                     /gene="rbfA"
                     /locus_tag="U1041_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEM4767982.1"
                     /translation="MANHFRTDRVGMEIKREVNEILQKKVRDPRVQGVTITDVQMVGD
                     LSMAKVYYTIMSNLASDNQKAQTGLEKATGTIKRELGRKLTLYKIPDLVFEKDQSIEY
                     GNKIDQMLRALDQKD"
     gene            6170..6841
                     /locus_tag="U1041_000862"
     CDS             6170..6841
                     /locus_tag="U1041_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin lysis protein"
                     /protein_id="HEM4767983.1"
                     /translation="MKTFISKLMLVSTVVLLAACQSNQVKGGESSSSSASSQVSDGSS
                     WQQASTIASSSATQASSVTTPELSEVYQSVIDRYQANIGQPAEAINQDEVSSYLSLLT
                     SQGQEYSGIFYSLYDVNHDGTEELLLALDKSGEYVLIDLYTQLADESLRLVDNFRNLG
                     FEIGPDALLRPLQDGTYLFEGAGVFRIYQYNAMIPGLKRISESDTNPETSPLLELKSL
                     HWVKL"
     gene            7010..8164
                     /locus_tag="U1041_000863"
     CDS             7010..8164
                     /locus_tag="U1041_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding domain-containing protein"
                     /protein_id="HEM4767984.1"
                     /translation="MKTNLKKLLYSGVTLMSLVVLAACSSTSSSTTTSSSAATSQTSV
                     ATTSNNSTSSDSSSSTIDWSALPTTEVTLSNDGLKITEGGTYILTGSTTAGVTVETDA
                     NVRIILAGAEISSSDTAAINVINADNVELEIKDGTTNTVKDTSNHTDTNIEGAIHVEA
                     DLTITGNGSLTVEGNFQDGIVSTDDMVISSGNITVTAVDDGIRGKDSLTINGGTINVT
                     AGGDGIKSTNDTDTTKGYTTITGGEITVKAGDDGIKAETALTIDGGTITVSESVEALE
                     GTNITINGGTIDVYGSDDAINAASTTSSEIFIKVTGGDLKVAVGSGDTDAFDANGDIY
                     ISGGTIDVTAQSAFDFDGTAELTGGTVTVNGEQITQITATGPGAGGHGGW"
     gene            complement(8344..9003)
                     /locus_tag="U1041_000864"
     CDS             complement(8344..9003)
                     /locus_tag="U1041_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HEM4767985.1"
                     /translation="MEFDLFLMICNYIGTIAFAVSGAVKGFKKKLDIFGISLLGIVTA
                     VGGGIIRDTMANRIPAALTDPTAIYLSLGVAISMYLIVINLKQDKPLDKKMIHFLSQT
                     NLIFDAIGLAIFALIGASTGISLQLNALTSGILAALTGVGGGIARDLLVNETPIVLKE
                     DVYAVLAFFSGVLYHLCVVNWKLPQIPIFISIFIISLFIRLLVIKYKINLPNMESKQK
                     G"
     gene            9236..10204
                     /locus_tag="U1041_000865"
     CDS             9236..10204
                     /locus_tag="U1041_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000258167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEM4767986.1"
                     /translation="MVSITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVG
                     EEAAAVGPIAGLTDEDIIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMH
                     LANVEKGNFGSNGIVGGGYALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNL
                     AAVWNLPVIFFITNNRYGISTDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEK
                     MQEVIEYVRAGNGPAMVEVESYRWFGHSTADAGVYRTKEEVNEWKAKDPLKKYRKYLT
                     ENKIATDEELDAIEAQVAEQVEASVKFAQESPDPDISVAYEDVFVD"
     gene            10633..11628
                     /locus_tag="U1041_000866"
     CDS             10633..11628
                     /locus_tag="U1041_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000005088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEM4767987.1"
                     /translation="MAETKVMALREAINLAQSEEMRKDEKVFLMGEDVGIYGGDFGTS
                     VGMLDEFGPKRVRDTPISEAAIAGSAVGAAQTGLRPIVDLTFMDFITIALDAIVNQAA
                     KTNYMFGGGLKTPVTFRVASGSGIGSAAQHSQSLEAWLTHIPGIKVVAPGTANDAKGL
                     LKSSILDNNPVIFLEPKALYGKKEEVNLDPDFYIPLGKGEIKREGTDVTIISYGRMLE
                     RALKAAEEVAAEGISVEVVDPRTLIPLDKELIIESVKKTGKVILVNDAYKTGGFIGEI
                     ASIITESEAFDYLDAPIIRIASDDVPVPYANILENAVLPNVEKIKAAIYKQVNRG"
     gene            11968..13353
                     /locus_tag="U1041_000867"
     CDS             11968..13353
                     /locus_tag="U1041_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase"
                     /protein_id="HEM4767988.1"
                     /translation="MAIEIIMPKLGVDMQEGEIIEWKKQEGDFVNEGDVILEMMSDKT
                     SMELEAEESGVLLKIVHGNGATVPVTEVIAYIGAEGETVEAGASATPVAPAAAIEEVP
                     AGRTPVIVAPAAAAKPQGGGKVRATPAARKLARELGIDLGLVPGTGANGRVHKVDVED
                     FKGAAPKATPLAARIAADQGVDLSTLTGSGVNGKIVKNDVLAVLAPAAVETAAPAPKA
                     EEKPAKELPEGVEIIKMSPMRKAISKGMVNSYLTAPTFTLNYDIDMTNLMALRKQVLE
                     PIMNKTGLKVTFTDLIGLAVVRTLMKEEHRYMNASLINDAQEIELHKFVNLGIAVGLD
                     DGLVVPVVHGADKMSLSDFVVASKDVIKKAQSGKLKGAEMSGSTFSITNLGMFGTKTF
                     NPIINQPNSAILGVASTVQTPVVIDGEIKIRPIMALCLTIDHRIIDGMNGAKFMVDLK
                     NLLENPLELLI"
     gene            13622..15382
                     /gene="lpdA"
                     /locus_tag="U1041_000868"
     CDS             13622..15382
                     /gene="lpdA"
                     /locus_tag="U1041_000868"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002984864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEM4767989.1"
                     /translation="MAIEIIMPKLGVDMQEGEIIEWKKQEGDFVNEGDVILEMMSDKT
                     SMELEAEESGVLLKIVHGNGATVPVTEVIAYLGAEGESVEVGSTPVPAEVAQATADLK
                     AAGLEVPAAPATAPQAPKAELAADEYDMVVVGGGPAGYYAAIRGAQLGGKIAIVEKSE
                     FGGTCLNKGCIPTKTYLKNAEILDGLKIAAERGINLASTNYTVDMDKTVDFKNKVVKT
                     LTGGVQGLLKANKVTIFNGLGQVNPDKTVVIGDKVIKGRSIVLATGSKVSRINIPGID
                     SKLVLTSDDILDLREIPKSLTVMGGGVVGVELGLVYASYGTEVTVVEMADRIIPGMDR
                     EVSVELQKVLSKKGMKFLTSVGVSEIVEANNQLTIKLNDGSEIVSEKALLSIGRVPQL
                     AGLENLNLELDRGRIKVNEYQETSIPGIYAPGDVNGTKMLAHAAYRMGEVAAENAIHG
                     NHHKAKLDFTPAAVYTHPEIAMVGLTEDQAIEKYGKENILIGRNSFTGNGRAIASNEA
                     HGFVKVIADKKYHEILGVHIIGPVAAEMINEAATIMESELTVDDVAASIHGHPTFSEV
                     MYEAFLDVLGVAIHNPPKRK"
     gene            15732..16577
                     /locus_tag="U1041_000869"
     CDS             15732..16577
                     /locus_tag="U1041_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4767990.1"
                     /translation="MRKIIFLDVDGTLVDYHNRIPESAIRAIRQARENGHLVYVCTGR
                     SRAEMQPELWEIGLDGMIGGNGSYVEHQGQVIMHQLLSAEDSRAIVDWLHERGLEFYL
                     ESNNGLFASENFRERARETLRIYSMNKGKTAEEVATQEVEDVMHGMIFDGQLYRNDLN
                     KVSFALDSYQDHLDSKQAFPQLVANTWGGRGESALFGDLGVKDIDKAHAISVLLDHLG
                     ASQADTIAFGDAKIDISMLDYCAVGVAMGNGGAEILAMADMITDDVEEDGLYNAFEKL
                     GLLKQ"
     gene            16757..17590
                     /locus_tag="U1041_000870"
     CDS             16757..17590
                     /locus_tag="U1041_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002303877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM4767991.1"
                     /translation="MQIDKVYNNNVVQAIDDQGSELIVMGKGLGFQKKAGEELDTSKI
                     EKTFVLQNDNQQADLSNLYLQMGSSETEVVNTIIARAEEVLGVSFDLSLYLALGDHLH
                     FVFQRSREGLSIENPLAWEIRKFYPKEYRLGLEALDAIKENLGLELEKGEASSIALHL
                     INAQKNGAFGKETQTISKIVTQILDIVRLHFGSVTYEEDTSYHRFVTHIQYFAQRVAN
                     GVVEGVNDAFLYEQVKANYPDSFACTTKIRQHIAEVYHFEMSKDEQVYLTIHIQRVKT
                     S"
     gene            17791..19701
                     /locus_tag="U1041_000871"
     CDS             17791..19701
                     /locus_tag="U1041_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003106782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM4767992.1"
                     /translation="MAKDYTDLATDIVAHVGGKENISSLKHCVTRLRFGLKDESKADT
                     DYLKARDGVVTVVQAGGQYQVVIGNHVPDVYAAVQKVAGISGDGALDIDEGDGPKGNL
                     FERFIDLLSGIFQAFLGPLAAAGIIKGIVAIMASRGLTSDNSAIYAILNAAGDGFFQY
                     LPLLVALTSARKFKMNEFTALAIGMALIYPTLPGSLAALKEAGLDNVFGIPFVLPTAG
                     SYLSTVIPAILATWVASIIEKNIRKVTPDVVKLFVVPFVTILLAVPLTFLVVGPVANF
                     ISDVLSNAFTAIMNFSPLLYGLILGATWQVLVMFGMHWAVVPLAIMQVASNGMSSILV
                     PALLPNFTQTGVLLAIMLKTKESKVKTVSMPALVSSIFGVTEPAIYGVTLPMKTPFFI
                     SCAVSGVIGAATMFFNVTGYSVGGMGVFLYPSLVNPANGDMSGMNAAIILTVVAIVAS
                     FAIQMALPVPYLYGEPTEKKPVEETKESVPELKEIKQEIIASPLIGKVVKLEDVPDAV
                     FASGAMGKGIAIDPLDGILVSPAKAEVTLVFPTKHAIGLRTENGAELLIHIGMDTVSL
                     AGKGFESFVQVGDRVEAGQKLLEFDLHQIKAADLPVITPIIVTNTADYEDILVTQESQ
                     INSGDYLLTTVK"
     gene            complement(19746..20075)
                     /locus_tag="U1041_000872"
     CDS             complement(19746..20075)
                     /locus_tag="U1041_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM4767993.1"
                     /translation="MITMHLYYTGPADNARAFAQEMEASGIADRIRKQAGNTRYQYFA
                     PLDDPHSILLVDSWTDQAALDIHHASPMMQEILDLRSKYQLTVTAERYQSDEAGIPEQ
                     DKDFLQR"
     gene            complement(20324..21238)
                     /locus_tag="U1041_000873"
     CDS             complement(20324..21238)
                     /locus_tag="U1041_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM4767994.1"
                     /translation="MQPPLTDKQFKHTIDYDSRLLPYKYYHTCVMDGIPDILFHWHNE
                     FEINYVYGGTARYHIDYDYFNSQAGDIILIRPNAAHSIHPIEQRGHETDTLLFHLDML
                     GASHLDQTSMLYLHPLQTDVFKCIPRIQPQDPGYAEIRQCLLTIFELVRHQPPYFELP
                     LKSRLFDFFYLLYRYRYIVRKNTDDMYRKNEKLRLLIEYIQQHYAENLTIEQLAEQMG
                     YTKTHFMTIFKQQTGTSCMEFIIQVRLRAATELLTNTLKPVLEIATEVGFNNLSNFNR
                     QFKQYYHTTPSSYRKQLRKNRTYTNFDK"
     gene            21348..22832
                     /locus_tag="U1041_000874"
     CDS             21348..22832
                     /locus_tag="U1041_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEM4767995.1"
                     /translation="MSRFPKNFLWGGAIAANQAEGAYNVDGRGLVQTDVTTGGSVNSP
                     RYTTYIDKDGKPGKYASMGHLGGHLPEGATYAVLEDHYYPNHKAVDFYHRYKEDIKLF
                     AEMGYSVFRLSISWARIFPNGDDAEPNQAGLDFYRSVFEECRKYGIEPLVSIWHFDTP
                     LSLEQRYGGWKNRKLVDFYVKYAETIFKEYKGLVKYWLTFNEINGGIMFLDLFGDEMT
                     DQDYQDAYQSLHHQFVASAKAVQIGHEIDPEYKIGNMICGITFYPGTCDPADILANQH
                     AWEQNIYYCGDVQAKGKYGTYAKRLWAEHNVVVEMAEDDLEVLAKGKVDMYTFSYYMS
                     TVVTTHTSEDTVSGNFSAGAKNPYLTYSDWGWAHDPSGLQYYLEKMYDRYEIPLMVVE
                     NGLGAFDTVEEDGSIHDDYRIDYHRSHVNAMADAIANGVDLIGYTTWGCIDLVSAGTG
                     EMRKRYGFIYVDMDDAGNGTLARTPKDSFYWYKKVIASNGEDVE"
BASE COUNT         7036 a         4471 c         5450 g         6289 t
ORIGIN      
        1 tcgactgtac aagctgtctg cagctcgttg catagtacta aaaataaact aaaagactat
       61 aaatgtctat aatccatcgt tttcctttac aaatagggat agatatgata gaatagtgta
      121 agtgaataat gagaaaaggg gttggcgtca gtcaaccctt tccctgtaca cggatttctg
      181 tatatagaat gaaggatagt acaagggagt ttactgtcaa aggaaataga gagtcctgga
      241 tagtgcgaac tatttgagta atgtatttct agcgactgta aaaataggag gtgtttatgt
      301 catcaattat tgaattggtc acagcagcaa ttacccccgc tattcaaact ccttacgagt
      361 tggtagatgt ggaatatggt aaaatgggcg gtgactatgt cctatcgatt tttgtcgata
      421 aggagggtgg aatttccctt caagatacgg cagatttatc cgaaaagatc agtccgattt
      481 tggacactat caaaccagac ccatttccag accaatacat gctggaggta acaagtccag
      541 gtttggagcg tcctttaaaa acggcagatg ctgttgagaa ggcggttgga aagtacatcc
      601 atgtcaagct ctatcaggca attgataaaa tcaaggtttt tgaaggaacg ttgctctcct
      661 ttgatggaac agacctgatt atggagtata tggataaaac tcgtaagaag gaagtgacta
      721 ttccttacca gacggtggct aaggcccgtt tggctgttaa gttataatgc tctttcatga
      781 gtattttata aagatattag actttaagaa aggacctttt gagcgcaaaa ggaaaacaac
      841 atgagtaaag aaatgctaga agccttccgt attttagagg aagacatggg tattaacaaa
      901 gcggatatca ttgatgcagt tacagagtcg cttcgttcag cttataaacg ccgttatggt
      961 caatcagaat cagcagtgat tgaatttgac gagaaaaaag gcgatttcca tgtatttact
     1021 gttcgtgaag tagtagatga agtatttgat agccgactag aaattagtct aaaagatgcc
     1081 ttggctattt catcagctta tgaaatgggt gacaaaatta aattccaaga agacccagcg
     1141 gaatttggac gtgtagctgc tcaatcagct aaacagacca tcatggaaaa gatgcgcaaa
     1201 caaaagcgtg ccattacctt caatacctac aagcaacatg aaaatgagat tatgtcaggt
     1261 acggtagagc gttttgataa tcgctttatc tatgtcaacc ttggtacgat tgaagcacaa
     1321 ttgtcaaaac aagaccaaat tcctggtgag gttttccaat ctcatgatcg cattgaagtc
     1381 tatgtctaca aggtagaaga taacggccgt ggggtgaacg tatttgtcag ccgtagccat
     1441 ccagagatga tcaaacgcct catggaacag gaaattcctg aagtatatga tggaactgtt
     1501 gaaatcatga gtgtggcccg tgaagctgga gaccgtacga aagtggctgt tcgtagccat
     1561 aatccaaacg tagatgctat cggtacaatc gttggtcgtg gtggttcaaa tatcaagaaa
     1621 atcaccagca aattccaccc agctcgttac gatgctaaga atgaccgcat gattccgact
     1681 gaggaaaata ttgatgtcat cgagtgggta gcagatgaag cagaatttat ctacaatgct
     1741 ctcgctcctg ctgaagttga ccaagtattg tttgatacag aagatggtaa gcatgctact
     1801 gttgttgtgc cagatgataa attgtccttg gcaatcggtc gtcgtggtca gaatgttcgc
     1861 ttggcagcgc atttgacagg attccgtatc gacatcaagt cagcatcgga gtatgaagct
     1921 tttgaagcaa ctcaatatgc aacagacgaa gttgtagaag aagtcgcaga agaacaagaa
     1981 taaggcaaaa ggagcaacca tggcaaaagc tagaaaaata cccttgcgca agtctgtggt
     2041 gtccggtgaa atcatcgaca aacgggattt gctccgtatt gtaaaaaata aagaaggtca
     2101 agtatttatc gatccaacag gcaaggccaa tgggcgagga gcctatatca aactagataa
     2161 tacggaagct gcccaggcta agaaacgtcg ggtcttcgat cgttccttta gtatggaagt
     2221 ggccgaagaa ttttacgatg aattaattgc ctatgttgat cataagatca agaggagaga
     2281 acttggactc gaataagaga cagaaaatct taaatttatt aggtttagcc cagcgagctg
     2341 gtcgcctggt ttcgggtgag gacctggttg ttgaagctat tcaaaaaggg caggcaaagt
     2401 tggtgttttt agccgaagat gctgctggaa atttaagtaa aaaagtaaca gataaaagtc
     2461 gtacctatca agtagaagtt gtaacagtgt tttcaacact ggaattgagt gcagctgtcg
     2521 gcaaggctag aaaagttctt gcagtgacag acgctggatt tacaaagaag atgaggtcta
     2581 ttatggaata gaacaggagg acaaggcatt gtctaagaag agattgaatg aaatagcccg
     2641 tgaattaggc gtaagcagta aggaagttgt tgctaaggct caagaattgg gttttgaagt
     2701 caaaagtcat gcttcaagcg tagatgaagc aagtgctaaa cgtcttgcag aaagctttgg
     2761 gggacaaaaa tcagaggcaa ctaaagttgc ggcaaaagtt agtcagcctg agaaggttga
     2821 tgaaactcca aaagtggaaa cagctaaggt agaaaaagct aaggaaacac agccagtagt
     2881 aaaagaagaa gttgcggcaa gcgcagtaca atcagctcca catcgtccac agagtcgaaa
     2941 ctttaaggca gagcgtgaag cacgggccaa agagcaggct gctaagcgag cacaaggtaa
     3001 aggtggtcaa ggcaaacaaa accaagaccg tcgtgacaac cgtcaacaag gtcaaagtcg
     3061 tccaaataac gaccgcaatg accgtcgcga caatagacgt gaacagggtt cagataaacg
     3121 aaaggacaat cgttttgggg accgtcgcga taatcgtgat aaccgttcag gtcagtcagc
     3181 tcgctttgaa caaagagcgg ctgcaaaacc agcaggacct aaaattgact tcaaagcgcg
     3241 tgctgctgct ttgaaagcag aacaaaatgc ggagtatgct cgtaccagtg aagaacgttt
     3301 tcgtcaggct caggaagcta aaaagcaacc taagaagcca aaagaaatta agtttgaaga
     3361 accggttgtg gaaagcaaac catttgtgaa gcctgcacct gttgcatcgg taccagagca
     3421 agttgcagaa actactgtag atacccgtcg taagaaacaa gctcgaccag ataaaaaacg
     3481 tgactttaat agtgacgaag aagatggtcc acggaaacaa caaagaaatc gaaatagtca
     3541 aaatcaagtg agaaatcaaa gaacaagtaa ctggaataac aacaagaaaa ataaaaaagg
     3601 caaggctaac caacctgcca aacctgtcac agaacgcaag ttccacgaat tgccaactga
     3661 atttgaatat actgctggca tgaccgtcgc agaaattgca aaacgaatca aacgtgaacc
     3721 tgctgaaatt gtgaaaaaac tcttccttat gggagttatg gcgactcaaa accaatcttt
     3781 ggatggagat actatcgaac tcctcatggt tgattatggt attgaagcga aagaaaaggt
     3841 agaggtcgat aacgcagata ttgagcgttt cttcgtagaa gagggctacc tcaatgaaga
     3901 agagatgaca gaacgcccac ctgttgtgac tatcatggga cacgttgacc atggtaaaac
     3961 aaccttgttg gataccctac gtaattctcg tgttgctact ggggaagctg gaggtatcac
     4021 acagcatatc ggtgcctacc aaattgagga agctggtaag aaaattacct tcttggatac
     4081 tccaggacac gcggccttta cttctatgcg tgcacgtggt gcatctgtca ccgacttgac
     4141 catcctagtc gttgcagcag atgatggtgt catgccgcaa acaattgagg ctatcaacca
     4201 ctcaaaagcc gctaatgtgc caatcattgt agctatcaac aagattgaca agccaggtgc
     4261 aaacccagag cgtgtcatcg gtgaattggc tgaacatggc gttatctcaa ccgcttgggg
     4321 tggagaatct gaatttgtag aaatctcagc taagtttaac caaaacattg atgaattgtt
     4381 ggaaactgtt cttttggttg ctgaaatcca agaactgaag gcagacccaa ctgttcgtgc
     4441 gattggtaca gttatcgaag cgcatttgga taaagggaaa ggtgcggttg caaccctcct
     4501 cgttcaacaa gggacactta atgttcaaga cccaatcgtt atcggaaata ccttcggacg
     4561 tgttcgtgcc atgacaaacg accttggtcg tcgtgttaaa actgctggtc catctacacc
     4621 ggtatctatt actggtttga acgaaacgcc aatggctggc gaccatttcg cggtttatga
     4681 agatgaaaaa tctgcgcgtg cagcaggtga agaacgtgct aaacgtgctc ttcttaaaca
     4741 gcgtcaagca acgcaacgag ttagtcttga aaacctcttt gataccctta aagcaggtga
     4801 ggttaagtca gttaatgtaa ttatcaaggc cgacgtacaa ggttctgttg aagctcttgc
     4861 atcatcgctt caaaagattg aagtcgaggg agtacgtgtc aatatcgtcc actctgcagt
     4921 tggtgctatc aatgaatcag atattactct tgcggaagct tcaaatgctc ttgtgattgg
     4981 tttcaacgtt cgtccaacag ctgaagcgcg tagccaagct gaagcagatg atgttgaagt
     5041 acgtcttcac agcatcattt acaaggttat cgaagagatg gaagatgcca tgaaaggtat
     5101 gcttgatcca gaatatgaag aaaaaatcat tggtgaggca atcattcgtg aaaccttcaa
     5161 ggtatccaaa gttggaacga tcggtggatt tatggtcgta cgtggtaagg ttacccgtga
     5221 ttcaagtgtt cgagttatcc gtgatggtgt tgtagtattt gatggtaaac tagctagttt
     5281 gaaacgctat aaagatgacg tgaaagaagt tggtaatgcc caagagggtg gtttgatgat
     5341 tgagaactac aacgacttga aagttgatga taccattgaa gcttacatca tggaagaaat
     5401 caaaaaataa tattttctca ctgtcaaaat catagacaag tgattttgtc gaggaagtga
     5461 taatttaata gattttagta gattttaaag caatagtttt taatctactt ggattattca
     5521 agctggggaa actcagcttt tctatcatct aagaaaggaa agaatatggc gaatcatttt
     5581 cgtacagacc gtgtcgggat ggaaatcaag cgcgaagtca atgagatttt acaaaagaaa
     5641 gttcgtgatc cacgtgtgca gggagtgacc attacagatg ttcagatggt cggcgatttg
     5701 tcaatggcca aggtttacta cacaatcatg agtaatttgg catccgataa tcaaaaagca
     5761 caaacgggtc ttgaaaaagc gacggggacc attaagagag aacttggtcg taagttaact
     5821 ctttataaaa ttccggattt ggtctttgaa aaagaccaat caattgagta cggcaataaa
     5881 attgaccaaa tgttgcgtgc tcttgatcag aaagattaac aacaaaagtc ggatggaaac
     5941 attcggcttt ttctggctcg gatgctttgt ttatatagtg gcttgaatta agaaaaggac
     6001 gattttgggt tatagtgtta ataacccact cctaaaataa ctttagagtt ctcaaattga
     6061 caaacttaga tgtgtcctgt ttctaattca ctctactata tatggtggcg tttacaagcc
     6121 ctcggaaaga tgttatacta agaccaaaga tagagcacag gaggaagtta tgaaaacatt
     6181 tattagtaaa ctgatgttag tgtctacggt tgtactatta gctgcttgtc agtctaatca
     6241 ggtaaaaggt ggtgagagtt ctagttctag tgcttcaagc caagtttcag atggttctag
     6301 ttggcagcaa gcgtcaacaa tagcatctag ctccgcgacg caagcatcct cagtgaccac
     6361 tcctgagcta agtgaagtat accaatcagt tattgatcgt tatcaagcga atataggtca
     6421 gcctgctgag gcaatcaatc aggatgaggt cagtagctat ctgagcttat taactagcca
     6481 ggggcaagaa tacagtggaa tattttatag tttgtatgat gtcaaccatg atggtacaga
     6541 ggagctgctt ctagctttgg ataagtcggg agaatatgtc ttaattgacc tctatactca
     6601 gcttgccgat gagagtctac gtttggtgga taatttccgc aatcttggat ttgaaattgg
     6661 accggacgcc ctacttcgtc ctttacagga tggaacgtac ttatttgaag gggctggtgt
     6721 ttttcgcatt tatcaataca atgcgatgat tccaggttta aaacggattt ctgaatcaga
     6781 taccaatcct gaaacttctc ccttgcttga gttgaaaagc ttgcattggg ttaagctata
     6841 gattttatca atgattattc ctcggctggg tttcccggcc ttttgtagtt cctaagaact
     6901 ttaagttttc ttttggcaat ctttaatcat tcttttagga aggaaaggta aactaggagc
     6961 atatcaggaa gggatacgac ttcctaaaga aagaaaagga atctacatta tgaaaacaaa
     7021 tcttaaaaaa ttactttact ctggtgttac tcttatgagc cttgttgtct tagcagcatg
     7081 ttcatctact tcaagttcaa cgactacttc aagctcagca gcaactagtc agacaagtgt
     7141 agcgacaact tcaaataata gcacttcatc agattcaagc tcgtcaacta ttgactggtc
     7201 agcccttcca acgacagaag tgacgctttc aaatgatggc ttgaaaatta ctgagggtgg
     7261 aacctatatt ttgactggtt caacaacagc tggtgtaacg gttgaaacag atgccaatgt
     7321 tcgcatcatt ctagcaggtg ctgagatttc aagttcagat acagcagcaa tcaatgttat
     7381 taatgctgac aatgttgaat tggaaatcaa agatggtacg acgaatacag tgaaagatac
     7441 cagcaatcat acagatacca atattgaagg ggctatccat gttgaagctg atttgaccat
     7501 tacaggaaat ggtagcctga ccgttgaagg caacttccaa gacggcatcg tatcgacaga
     7561 tgacatggtt atcagtagcg gaaacatcac tgtgacagca gtggatgatg gtatccgtgg
     7621 taaggattca ttgacaatca atggtggtac aatcaatgta acagcaggtg gtgacggtat
     7681 caagtcaacc aacgatacag atacgaccaa aggttataca actatcacag gtggtgaaat
     7741 tactgtaaaa gcaggtgatg atggtattaa agcggagacg gctttgacaa ttgacggagg
     7801 taccattaca gtatcagaat cagtagaagc cttggaagga actaatatca ctatcaacgg
     7861 tggtacaatt gatgtctatg gttcagatga tgctattaat gcggcaagta caacgtcatc
     7921 agaaatcttc atcaaggtaa ctggcggtga cttgaaagta gctgtaggta gtggagatac
     7981 ggatgccttt gatgctaatg gagacattta tatctcaggt ggtacaattg atgtaacagc
     8041 tcaatctgct tttgacttcg acggaactgc tgaattgaca ggaggtactg tgacagttaa
     8101 cggtgagcag attactcaaa tcacagcaac aggaccaggt gctggtggcc acggtggctg
     8161 gtaatcaata ataatacaaa agggagtggg aaagaactcg accgaacaaa aaagagttcg
     8221 tcttcccacc cccgcacagt tgattaggac agatttggag tgtaaaacac gaacaaatct
     8281 gccaatcaac cactgcgctg agatgttgac acgaactctg agaagtggcg ctgagctttt
     8341 tgctcagcct ttttgtttgc tttccatatt gggaagattg attttgtatt taatgacaag
     8401 gagtcgaatg aataaagaaa tgataaaaat tgagatgaag attggaattt gtggcaattt
     8461 ccaatttaca acgcaaagat gatagaggac tcctgagaaa aatgcaagga cagcatagac
     8521 atcttcttta agaacaatgg gtgtttcatt gacgagtaaa tcacgggcga ttccgcctcc
     8581 gacacctgtt aaagctgcca gaataccact ggttagagcg tttagctgga gagagatgcc
     8641 agtactggct ccaatgaggg cgaagatggc tagaccgatt gcatcaaaga taaggtttgt
     8701 ctgggaaagg aaatgaatca tcttcttatc aagtggtttg tcctgcttta gattgataac
     8761 aatcaagtac atgctaatcg ctactccgag agataaatag atggctgtag gatcagtcaa
     8821 ggcggcagga atgcgattgg ccattgtatc tcgaataatt cccccaccaa cggcggtaac
     8881 gatgccgagc aagctaattc caaaaatatc taactttttc ttaaatcctt ttacggcccc
     8941 cgaaacagca aatgcgatag tgcctatgta gttacaaatc ataagaaata aatcgaattc
     9001 cataagaacc tccgtaccta tattaacaga aagaaagacg gcgtgcaagc ttattttaaa
     9061 gtttgtgaaa aaagtttcaa acaagtaaag ttaatctttt gaggatttgt gaaaaaacgc
     9121 actaaatcaa ggttttcacg aaaatttctg taaaaagaaa acggttcaat tatttgccat
     9181 ttgtgaaata ttggtctatc atagtacaga aagagaaaaa cctttggagg aaattatggt
     9241 atctatcaca aaagaacaac atttggacat gttcttgaaa atgcaacaaa tccgtgatgt
     9301 tgatatgaaa ttaaacaaat tagtgcgtcg cggtttcgta caaggtatga ctcacttctc
     9361 agtcggtgaa gaagctgcag ctgttggacc tattgctgga ttgacagatg aggacatcat
     9421 cttctcacac caccgtggtc acggtcacgt tattgcaaaa ggtattgaca tcaacggcat
     9481 gatggctgag cttgctggta aggcaacagg tacatctaaa ggccgtggtg gttctatgca
     9541 cttggctaac gttgaaaaag gaaactttgg ttcaaacggt atcgtaggtg gtggttatgc
     9601 ccttgcggtg ggtgcggccc ttacccaaca ataccttggt acagataaca tcgttattgc
     9661 cttctcaggt gactcagcga caaacgaagg ctcattccac gaatcaatga acttggcagc
     9721 tgtttggaac ttgccagtta tcttcttcat tacaaacaac cgttacggta tttcaactga
     9781 catttcttat tctactaaga ttcctcacct ctaccaacgt gcagcagcat acggtattcc
     9841 aggtcattat gttgaggatg gtaacgacgt tattgccgtt tatgagaaaa tgcaagaagt
     9901 tatcgaatac gttcgtgcag gtaatggacc agctatggtt gaggttgaat cataccgctg
     9961 gtttggtcac tcaactgccg atgctggtgt ttaccgtacc aaagaagaag ttaacgagtg
    10021 gaaagcaaaa gacccactta agaaataccg caaatacttg acagaaaaca agattgcgac
    10081 tgacgaagaa ttggatgcta ttgaagcgca agtggcagaa caagtagaag catctgtgaa
    10141 attcgcacaa gaaagcccag atccagacat ctcagtagcg tatgaggatg tgtttgtaga
    10201 ttagggtgtg aagacgttaa agaggcacag aaaaattagg gagtcagcta gtgatgcgta
    10261 catcactaat ggctcatcta tttttccaag cctctagtct gaacccaact attaacgtaa
    10321 gaagtttgac tacgctctaa agagcaagtc aaactacggt agccactatg gtggactacc
    10381 tacttacctc actaacttcg cctattcagc aatatcggct gaatagtctc cgtgtcgtaa
    10441 gtgatgtgat cagtttgact aagctctaaa gagcaagtca aactagggta gttcaccaag
    10501 gtggactacc tacttaagtt cgagtacaat tctaaggtgt cttaagctgg gacaataaac
    10561 aattacatcg tagtaattgt ttgattttcc ttagtacagt aaagataaat tgatataaat
    10621 taggagtaaa aaatggctga aacaaaagta atggccttgc gtgaagcgat taacttggct
    10681 cagagcgaag aaatgcgtaa ggatgaaaaa gtattcttga tgggtgaaga cgtcggtatc
    10741 tacggcggtg acttcggtac atctgttggt atgttggacg aatttggtcc aaaacgcgtt
    10801 cgcgacacac ctatctctga ggctgcaatc gctggttctg cggttggtgc ggctcaaaca
    10861 ggtcttcgtc caatcgttga cttgaccttc atggacttca tcacaattgc ccttgatgcg
    10921 attgttaacc aagcggctaa aaccaactac atgtttggtg gtggcttgaa aacacctgta
    10981 accttccgtg tggcatctgg ttcaggtatc ggttcagcgg cacagcactc acaatctctt
    11041 gaagcttggt tgactcacat cccaggtatc aaagttgttg caccaggtac agctaacgat
    11101 gcaaaaggcc ttttgaaatc atctatcctt gataacaacc cagttatctt cttggagcca
    11161 aaagcacttt atggtaaaaa agaagaagtg aacttggacc cagatttcta cattccactt
    11221 ggtaagggtg aaatcaaacg tgaaggtaca gatgtaacca tcatttcata tggtcgtatg
    11281 ttggaacgtg ccttgaaagc agctgaagaa gtagctgcag aaggcatcag cgtagaagta
    11341 gttgacccac gtacccttat cccattggat aaagaattga tcatcgaatc tgtgaagaaa
    11401 actggtaagg ttatcttggt taacgatgct tataaaacag gtggtttcat cggtgaaatc
    11461 gcatcaatca tcacagaaag cgaagccttt gactacttgg atgcaccaat catccgtatc
    11521 gcttcagacg atgtaccagt tccttacgca aacattcttg aaaacgcagt attgccaaac
    11581 gtagagaaaa tcaaagcggc aatctataag caagtaaaca gaggttaatc ttatcgtcat
    11641 ccgcttatct tttctggctg tgttgatttg gcctgcctaa cgtcagttat gcctgcacca
    11701 aatcgccttg tcagaaaagc aatcggaaag atgataaccc taaaatgcta gaaataaaat
    11761 attctagcat gactaagaat gcttgggaaa gaattgagcc gcttcgatta tcgaagtctg
    11821 gttttgttct tgacaaggta agaaactgaa agaaaggaat tgaacccgtc cggaagacta
    11881 ggagaaaaga taaatcgcta agaaaatatg gattttctat gatttcctaa gctccttcgt
    11941 tttctgttcg gacttggtat cttaaaaatg gctattgaaa tcattatgcc taagctcggt
    12001 gtggacatgc aagaaggtga aatcatcgag tggaaaaaac aagagggcga ttttgtcaac
    12061 gaaggcgacg tcatcttgga aatgatgtct gacaagacta gcatggagct ggaagcagaa
    12121 gagtcaggcg tcctattgaa aattgttcat ggaaatggtg ctaccgtccc tgtaacagaa
    12181 gtcattgcct acatcggtgc agaaggtgaa acggttgaag ctggagcgtc agctactcca
    12241 gttgctcctg cagcagccat cgaagaagtg cctgcaggtc gtacaccagt catcgttgct
    12301 cctgccgctg ctgccaaacc acaaggtggt ggcaaggttc gtgctactcc agctgcgcgt
    12361 aagttggcgc gtgagcttgg tattgacttg ggacttgtgc caggaactgg tgctaacggt
    12421 cgtgtccaca aggttgacgt cgaagacttc aagggagcag ctccaaaagc aactccgctt
    12481 gcagcccgta ttgcagcaga ccaaggtgtt gacttgtcaa cccttacagg ttcaggtgtc
    12541 aacggtaaga ttgtcaagaa cgacgttctt gcagtgcttg ctcctgcagc tgtagagact
    12601 gctgctccag caccgaaagc agaagaaaaa ccagctaaag aattgccaga aggtgttgaa
    12661 atcatcaaga tgagcccaat gcgtaaggct atttcaaaag gtatggtcaa ctcttacttg
    12721 actgctccga catttacact taactacgat attgacatga ccaacctcat ggcacttcgt
    12781 aagcaagtcc ttgagccaat catgaacaag actggtttga aagtaacctt tacagacttg
    12841 atcggtcttg cggttgttcg tactttgatg aaagaagaac accgctacat gaacgcatct
    12901 ttgattaacg atgctcaaga aatcgaatta cacaagttcg tcaaccttgg tatcgcagtg
    12961 ggtctagatg atggcttagt ggttccagtt gttcacggcg cagataagat gagcttgtct
    13021 gactttgtgg tggcttcgaa agatgtcatc aagaaggctc aatctggtaa gttgaagggg
    13081 gctgaaatgt caggttcgac cttctctatc accaacttgg gtatgtttgg tactaaaacc
    13141 tttaacccaa tcatcaacca accaaactca gcaatccttg gtgtagcatc aactgttcaa
    13201 acaccagttg ttattgacgg cgaaatcaaa atccgtccaa tcatggcact ctgcttgacc
    13261 atcgaccacc gtatcattga tggtatgaat ggtgctaagt tcatggttga cttgaagaac
    13321 ttgctggaaa acccattgga attgttgatc tgagataaga tgcaaaaggc gttaagaaaa
    13381 ccgtatgaaa ataggaaatc aacgatgtgc cttgaggcac gaggcgattt atctttttca
    13441 ataggttttt agcctgtgct caatttggta aagagaaaaa ataaagaaag gatgtaggac
    13501 gagttcgtga tatttgaaca cgaactaaat gctcggaatt tagatagtcc gccttggatg
    13561 caagcatcct acgttagact cctaaaattc tgtcgcattt gacgttcttt gtatcataac
    13621 tatggcaatt gaaattatta tgcctaaact tggtgtagat atgcaagaag gcgaaatcat
    13681 cgagtggaaa aaacaagaag gtgattttgt caacgaaggc gatgttatct tggagatgat
    13741 gtcagacaag acaagcatgg aattggaagc ggaagagtca ggtgttctct tgaaaatcgt
    13801 tcatggtaac ggtgcgacag ttcctgtaac tgaagtcatt gcttaccttg gtgcagaagg
    13861 cgaatcagtt gaagttggta gcacacctgt tccagctgag gttgctcaag caactgctga
    13921 cttgaaagca gctggtttgg aagtacctgc agctcctgca acagctccac aagctcctaa
    13981 ggctgaattg gcagctgacg agtacgacat ggttgttgtc ggtggtggtc ctgctggtta
    14041 ctacgcagct attcgtggtg ctcaattggg cggtaaaatc gctatcgttg agaaatcaga
    14101 atttggcggt acctgcttga acaagggctg tatcccaact aagacctacc ttaaaaacgc
    14161 tgaaatcctt gacggcttga agattgcggc tgagcgtggt atcaaccttg cttcaaccaa
    14221 ctacacagtt gatatggaca agacggttga cttcaagaac aaggttgtga agacattgac
    14281 tggtggcgtt caaggtctct tgaaagctaa caaggtaaca atcttcaacg gtcttggtca
    14341 agtaaaccct gacaagactg ttgtaatcgg cgacaaggtt atcaaaggtc gcagcatcgt
    14401 tcttgcaaca ggttcgaaag tatcacgcat caatattcca ggtatcgatt ctaagttggt
    14461 attgacttct gatgatatcc ttgatttgcg tgaaattcct aagtcactta ctgttatggg
    14521 tggtggcgta gtcggcgtag aacttggttt ggtttacgca tcatacggca cagaagtaac
    14581 cgttgttgaa atggctgacc gtatcattcc aggtatggac cgcgaagtgt ctgttgaatt
    14641 gcaaaaagtc ctttccaaga aaggtatgaa attcttgacc tcagttggtg tatctgaaat
    14701 cgttgaagca aacaaccagt tgaccatcaa gttgaacgac ggatcagaaa tcgtttctga
    14761 aaaagctctt ctttcaatcg gtcgtgtacc acaattggct ggtcttgaaa atctgaacct
    14821 tgaactagac cgtggtcgta tcaaggtcaa cgaataccaa gaaacatcaa tcccaggtat
    14881 ctacgcacca ggtgatgtta acggtactaa gatgttggct cacgctgctt accgtatggg
    14941 tgaagtggca gctgaaaatg ccatccatgg caaccaccac aaggctaaat tggacttcac
    15001 accagcagcg gtttacacac acccagaaat cgctatggtt ggtttgacag aagaccaggc
    15061 tatcgagaaa tacggtaaag aaaacatcct tatcggtcgc aacagcttta ctggtaacgg
    15121 tcgtgccatt gcttctaacg aagcccatgg tttcgtaaaa gtgattgcgg ataagaaata
    15181 ccatgaaatc cttggtgttc acatcatcgg tccagttgca gctgaaatga tcaacgaagc
    15241 agcaactatc atggaatctg agttgacagt tgatgacgtg gcagcatcca tccacggtca
    15301 cccaaccttc tcagaggtta tgtatgaagc cttccttgat gtgcttggtg ttgcaatcca
    15361 caacccacca aaacgtaaat aatatagcat tcagtttatc ttttattact tcgttaactc
    15421 gatttgccgt actctacaga agcgacttgc ctcgcaagtc ctatttccaa cctagaacag
    15481 ccttgaggct gttctagcaa cctgcatctt ttgatgcgaa cgcagttcgc cttatttcca
    15541 acctccaact atctcccaga taattggagc tagtactaaa agcaaactga aatgctaaca
    15601 tctaaaagaa agtccgagtg gctttctttt tttgatgttc ataggatagt atcaatcttt
    15661 cgcagttttt gactgttatt tgatagaaaa acagactata cttgtagtag aaaaaggcaa
    15721 ggagaataaa gatgcgcaag attatatttt tagatgttga cggaaccttg gttgactatc
    15781 ataatcggat tccagaatct gccattcgtg ctattcggca ggctagagaa aacgggcact
    15841 tggtttacgt ctgtacaggt cgaagtcggg cagaaatgca gccagaacta tgggagattg
    15901 gtcttgacgg aatgattggt ggcaacggct cttatgtcga gcatcaaggt caggtcatta
    15961 tgcaccagct cctatcagca gaggatagcc gagcgattgt ggactggctc catgaacgcg
    16021 gcttggaatt ttatctggag agcaacaatg gcctctttgc cagtgagaat ttccgtgaac
    16081 gtgcccgtga aaccctgcgg atttattcca tgaacaaggg gaaaactgca gaagaggtgg
    16141 ccactcagga agtagaagat gtcatgcacg gtatgatttt tgacggtcaa ctctaccgca
    16201 atgacctcaa caaagtcagt ttcgcgctcg attcctacca ggaccacttg gattccaagc
    16261 aagcctttcc gcaactggtc gcaaacacct ggggaggtcg cggagagtca gctctctttg
    16321 gtgacttggg ggtgaaagac atcgacaagg cccatgccat ttctgtattg ctggaccact
    16381 taggagctag tcaggcagac actatcgcct ttggtgacgc taaaattgat atttccatgc
    16441 tggactattg tgcagttgga gtggctatgg gcaatggcgg agcggaaatc ttggctatgg
    16501 cagatatgat aacggacgat gtagaagaag acggcctcta taatgccttt gaaaagttgg
    16561 gactacttaa acagtagccc tcagaataaa ttattgaatc ccttgcaaaa ccgcttacaa
    16621 tctgataaga taagagtagg attgttactg ataagcaggc aaaacctaag cagatagtaa
    16681 aggggctggg aacagcctta tttgctatat gcttgggttc ttttttatca gtcgagtaat
    16741 gaggtggtga aaatacatgc agatagataa agtctacaac aataacgttg ttcaagcgat
    16801 tgatgatcaa ggaagtgaac tgattgtcat ggggaaggga ctaggttttc agaaaaaagc
    16861 aggggaagaa ttagacacca gcaaaatcga gaaaaccttt gtcctgcaaa atgacaatca
    16921 acaggctgac ctttccaatc tctatcttca gatgggaagt agtgagacag aagtcgtcaa
    16981 tactattata gcgagagcgg aagaggtttt aggtgtttca tttgatcttt ctctttattt
    17041 ggcattggga gaccaccttc actttgtttt tcagagaagt cgtgaaggat tgagcataga
    17101 aaatcctctg gcttgggaga ttcggaaatt ctatccaaaa gaataccggc ttggactgga
    17161 agcacttgat gcgataaaag aaaatctggg attagaatta gaaaaagggg aagcttcttc
    17221 tattgcactt cacttgatta atgctcagaa gaatggtgct tttggcaagg aaacccaaac
    17281 cattagtaaa atcgtgactc agattttaga cattgtccga cttcattttg gtagtgtgac
    17341 ctacgaggag gataccagct atcatcgatt tgtaacacat attcagtatt ttgctcaacg
    17401 tgtggccaat ggtgtggtcg aaggagtcaa tgatgccttt ctctatgagc aggtcaaggc
    17461 taactatccc gattcatttg cttgtacgac taagattcgt cagcatattg cggaagttta
    17521 ccattttgaa atgtccaaag atgaacaagt ctatttgacc atccatatcc agcgcgtaaa
    17581 aacgagttag aataaaatca aaaaaaactt cagaaaacgc ttgcaaaaca gtttgtaatg
    17641 tgttattatt atttcaacaa aaggattgtt actggttagc aggcaaaacc taaatatata
    17701 caagatactc tttttgacgt agttcaaggg gcagtgtttg gtatatgttt aggtttttct
    17761 gtttttccca gaaaagaaag gagccgaaaa atggctaagg attatacaga tttagctaca
    17821 gatattgtag ctcatgttgg tggaaaagaa aacatcagca gtttgaaaca ctgcgtgact
    17881 cgtcttcgtt ttggtctcaa ggatgagagc aaggctgata cagactactt gaaggcgcgt
    17941 gatggcgttg tgacagtagt tcaagcaggt ggtcaatacc aagtggttat cggcaaccat
    18001 gtacctgatg tttatgcagc ggtgcaaaaa gttgctggta tctcagggga tggcgcctta
    18061 gatattgatg aaggcgatgg tccaaaagga aatctctttg aacgctttat tgatttgtta
    18121 tcaggtatct tccaagcctt tttggggcct ttggctgctg ctggtatcat taaaggtatt
    18181 gttgccatta tggcttcgcg aggcttgacg agtgataata gtgctatata tgctatctta
    18241 aatgcggcag gtgacggttt cttccaatac ttgccactgt tggtggctct gacatctgct
    18301 cgcaagttta agatgaatga atttacagcc ctagcaatcg gtatggcctt gatttaccca
    18361 accttgccag gttcgcttgc agcattgaaa gaggcaggac tggataatgt atttggtatt
    18421 ccatttgttt taccaacagc aggtagctac ttgtcaacgg ttatcccagc tattctcgca
    18481 acatgggtgg cttcaattat tgagaaaaac atccgtaaag tcacaccaga tgttgtcaaa
    18541 ctctttgttg ttccatttgt aactatcttg cttgctgttc cattgacctt cttagtggtt
    18601 ggtcctgtcg caaacttcat ctctgatgtc ttgtcaaatg catttactgc aatcatgaac
    18661 tttagtccat tgctctatgg tttgattctt ggtgcgactt ggcaagtttt ggttatgttt
    18721 ggaatgcact gggcagttgt cccattggca attatgcaag tagcatcaaa cggtatgtct
    18781 tcaattcttg taccagcctt acttccaaac tttacacaga ccggggttct tttggcaatc
    18841 atgttgaaga ccaaggagtc taaggttaaa acagtttcta tgcctgcatt ggtttcatct
    18901 atttttggtg tgactgagcc agctatctac ggtgtgaccc ttccaatgaa aacaccgttc
    18961 tttatctcat gtgctgtttc aggtgtgatt ggtgctgcca ctatgttctt caatgtaaca
    19021 ggttactctg taggtggtat gggtgtcttc ttgtatccgt ctctagttaa tccagcaaac
    19081 ggtgatatgt caggtatgaa tgctgccatt attttgacag tagttgcaat cgtcgcatcc
    19141 ttcgctatcc aaatggcgct tccagtacct tacttatatg gagaaccaac tgaaaaaaag
    19201 cccgttgaag aaacaaagga gtctgttcca gaattaaaag aaattaaaca agaaattatt
    19261 gctagtccac taatcggtaa agtagttaaa ttagaagatg ttcctgatgc agtctttgct
    19321 tcaggtgcta tggggaaagg gattgccatt gatcccctag atggtattct tgtttcacca
    19381 gctaaagctg aagtgaccct tgttttccca accaagcatg ccattggtct tcggacggaa
    19441 aatggggcag agcttctcat ccatatcggt atggacacag tctctctagc tggtaaaggc
    19501 tttgaatcct tcgtccaagt aggtgaccga gttgaagcag gacaaaaatt gctggaattt
    19561 gatctccacc aaatcaaagc agctgaccta ccggtcatca ctccaattat cgtgaccaat
    19621 acagctgact atgaggacat cttggtaacc caagagagcc aaatcaacag tggtgattac
    19681 ctgttgacaa cggtgaaata aaaaataaag tggttggcag tgccaaccac ttttttgaat
    19741 cttgcttagc gttgaagaaa atccttatcc tgctcaggaa tgcccgcctc atcactctga
    19801 tagcgttcag cggtgacagt cagctggtac ttactgcgta agtctaagat ctcctgcatc
    19861 attggggaag catggtggat gtccaaagca gcttggtctg tccagctatc aaccaagagg
    19921 atagaatggg gatcatcgag cggtgcaaag tattgataac gtgtattccc agcctgcttg
    19981 cgaatgcggt cggcaatgcc actagcttcc atttcctgag cgaaagcacg tgcattgtca
    20041 gctggtccag tatagtagag gtgcatggta atcatagtat aagatataga gggcgctaag
    20101 cggacacaga caaaatatag tcatttagtt tacttttagt actaggcaat gagctgcagg
    20161 cagtactgaa gtacgcaaag cgaattaaca aagtaataaa agaaaaacta aatgacgtag
    20221 gaaacagaac gacgacgcaa gcgcccagtt ctcgtttatc tttttggttt agtccgtagc
    20281 ccgtattcag ttcaaccaaa tacggaggcc ctagtccttt ctattattta tcaaaattag
    20341 tataggtcct attcttccgc agttgtttgc ggtagctgct aggtgtggta tggtagtatt
    20401 gcttgaactg gcggttgaaa ttggataaat tattaaagcc aacttcggtc gcaatttcaa
    20461 gcacaggttt gagagtgttt gtcaggagct cagtagctgc ccgcagtcgg acttggatga
    20521 taaattccat acaggaagtt cctgtttgtt gcttgaagat tgtcataaaa tgggtttttg
    20581 tatagcccat ttgctctgct agctgctcga tggtgagatt ttctgcataa tgttgttgga
    20641 tgtattcaat caacaaccgc agtttttcat ttttccgata catatcatcg gtattttttc
    20701 ggacgatgta gcggtagcgg tagagcaggt agaagaagtc aaagagtcgg ctcttgagag
    20761 gtagctcaaa gtaaggcggc tggtgtctga ccaactcaaa aatggtgagc aggcattgtc
    20821 taatctctgc gtagccaggg tcttggggct ggatgcgtgg aatacacttg aaaacatctg
    20881 tctgtaaggg gtgtaggtag agcatactgg tctgatctaa gtgagatgcc cccagcatat
    20941 ccaagtgaaa gagtagggta tccgtttcgt gcccccgttg ctcaatcgga tggatggaat
    21001 gcgcagcatt gggtcgaatc aggataatat caccagcctg actattgaaa taatcatagt
    21061 cgatatggta acgggctgtc cctccgtaaa catagttgat ttcaaattca ttgtgccaat
    21121 gaaagagaat gtcaggaatg ccatccatga cacaggtatg gtaatacttg tagggtaaca
    21181 aacgactatc gtagtcaatg gtgtgcttaa actgtttatc cgttaatggt ggttgcatac
    21241 cttcctcctt ttcgtaggat agtatcatta tagcatatta tttgagaaga aaagggtttc
    21301 aaatctgttt atactatatt tgttagaaaa aataagggag aagtaagatg tcacgttttc
    21361 caaaaaattt cctctgggga ggagctatcg cagccaacca ggcagaaggt gcctataatg
    21421 tggacggacg cggtttagtc cagacagacg ttacaacagg aggatctgtc aacagccccc
    21481 gctatacaac ctacattgat aaggacggca agccaggtaa atatgcttcc atgggacatt
    21541 tgggaggtca tctgccagaa ggggcgacct atgccgtcct agaagaccac tattatccaa
    21601 accacaaggc tgtggacttc taccaccgct ataaagaaga tatcaagctc ttcgcagaaa
    21661 tgggttactc cgttttccgt ttgtcgattt catgggcacg gattttccca aatggtgatg
    21721 atgcagagcc aaaccaagca ggtcttgatt tctatcgttc tgtctttgaa gaatgtcgca
    21781 aatatggcat tgagccattg gtttccattt ggcacttcga tacacctttg agcttggagc
    21841 aacgctatgg tggttggaaa aatcgtaagc tcgttgattt ttatgtcaag tatgcagaaa
    21901 ccattttcaa ggaatacaag ggtctcgtta aatactggtt gaccttcaat gaaattaacg
    21961 gcggtatcat gttcttggat ctctttggtg atgagatgac tgaccaggat tatcaagatg
    22021 cctaccaaag ccttcaccat caatttgttg cctcagccaa ggctgttcaa atcgggcatg
    22081 agattgaccc agaatacaag attgggaaca tgatttgtgg tattaccttc taccctggca
    22141 cctgtgaccc agcagatatc cttgccaacc aacacgcttg ggagcaaaac atctactatt
    22201 gtggtgatgt acaggcaaaa ggaaaatatg gtacctacgc taaacgcctt tgggcagagc
    22261 ataatgtggt ggttgagatg gctgaggatg acttggaagt tctggccaaa gggaaagtcg
    22321 atatgtacac cttctcatac tatatgtcta ccgttgtgac tacccacaca tctgaagaca
    22381 cggtttcagg caatttctca gcaggagcta aaaaccctta cttgacttac tcagactggg
    22441 gttgggcaca cgatccatct ggactccaat actaccttga aaaaatgtat gatcgctatg
    22501 aaattccact catggttgta gaaaatggtt taggagcctt tgatacagtt gaagaagacg
    22561 gttctattca cgacgattac cgtatcgact accaccgctc ccatgtcaat gccatggcag
    22621 atgccattgc caatggtgtt gatttgattg gctataccac ttggggctgt attgacctag
    22681 tatcagcagg aacaggtgaa atgcgaaaac gctacggctt tatctacgtt gatatggatg
    22741 atgctggaaa tgggacactt gctagaacac caaaagattc attctattgg tacaagaaag
    22801 tcattgccag caatggtgag gatgtagaat aaggaagacg gcgaagtgct gtttcagaac
    22861 gtagacaaac tcctaaaaaa tataaaaaat tgaaaaagtt tgcgaaagat agcaattcac
    22921 taaactctta gaaaggttga tatttcagtg tttctgagag ttttttattt tcaccataaa
    22981 gaaaaaagat tgaaaaaaat tgtccaaaat ggactttttc ttcaatctga gacggcgaag
    23041 tgccgttttt ctttggagag agcagaggat aaattgctag agtactagtt gtagcagtct
    23101 accagttgaa ttaacagtgt acaggcgact aataatgcca ccagactaat tttttcaatg
    23161 gaggcaggca cgagttgttc atcagctatt tccttactgt tacggaaaaa actgcagtgg
    23221 ttatttttgt aaccgtttgc taaact
//
LOCUS       DASFQS010000026        23242 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.026, whole genome shotgun sequence.
ACCESSION   DASFQS010000026 DASFQS010000000
VERSION     DASFQS010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23242
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.026"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(90..1349)
                     /locus_tag="U1041_000875"
     CDS             complement(90..1349)
                     /locus_tag="U1041_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEM4767996.1"
                     /translation="MKKYQVIIQDILTGIEEHRFKRGEKLPSIRQLSEQYHCSKDTVQ
                     KAMLELKYQNKIYAVEKSGYYILEDRDFQDHTVELNPADFQELPYEDFRICLNESLIG
                     RENYLFNYYHQQEGLAELISSVQSLLMDYHVYTKKDQLVITAGSQQALYILTQMETWA
                     GKTEILIENPTYSRMIELIRHQGIPYQTIERDLDGIDLEELESIFQTGKIKFFYTIPR
                     LHNPLGSTYDIATKTAIVKLAKQYDVYIIEDDYLADFDSSHSLPLHYLDTDNRVIYIK
                     SFTPMLFPALRIGAISLPNQLHDTFIKHKSLIDYDTNLIMQKALSLYIDNGMFARNTQ
                     HLHHIYHAQWNKIKDCLEKYALNIPYRISKGSVTFQLSKGILSPSIQHMFEKCYYFSG
                     QKADFLQIFFEQDFADKLEQFVRYLNE"
     gene            1469..2203
                     /gene="yaaA"
                     /locus_tag="U1041_000876"
     CDS             1469..2203
                     /gene="yaaA"
                     /locus_tag="U1041_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEM4767997.1"
                     /translation="MKIIIPNAKEVNTNLENASFYPLSDRSKPMLDAISQFDVKKLAA
                     FYKLNEAKAELEADRWYRIRTGQAKTYPAWQLYDGLMYRYMDRRDIDSKEENYLRDHV
                     RIATALYGLIHPFEFISPHRLDFQGSLKIGNQSLKQYWRPYYDQEVGDDELILSLASS
                     EFEQVFSPQIQKRLVKILFMEEKAGQLKVHSTISKKGRGRLLSWLAKNNIQELSDIQD
                     FKVDGFEYCTSESTANQLTFIRSIKM"
     gene            2309..3748
                     /locus_tag="U1041_000877"
     CDS             2309..3748
                     /locus_tag="U1041_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM4767998.1"
                     /translation="MKKRSGRSKSSKFKLVNFALLGLYAITLCLFLVTMYRYNILDFR
                     YLNYIVTLLLVGVAVLAGLLMWRKKARIFTAFLLIFSLVITSVGIYGMQEVVKFSTRL
                     NSNSTFSEYEMSILVPANSEITDVRQLTSILAPAEYDQENITALLDDISKMESTQLAT
                     SPATSYLTAYQSMINGESQAMVFNGVFTNILENEDPDFSSKVKKIYSFKVTQTVETAT
                     EQVSGDSFNIYISGIDTYGPISSVSRSDVNIIMTVNRATHKILLTTTPRDSYVAIADG
                     GQNQYDKLTHAGIYGVNASVHTLENLYGIDISNYIRLNFTSFLQLIDLVGGIDVENTQ
                     EFTSGGYNFPVGTVHLDAEQALIFVRERYSLANGDNDRGKNQEKVIAALIKKLSSPEN
                     LRNYQAILNSLEDSIQTDISIETIIGLVNTQLESGTQFTVESQALTGTGRSDLSSYAM
                     PGSQLYMMEINQDSLEQAKAAIQSVLDGN"
     gene            3765..4454
                     /locus_tag="U1041_000878"
     CDS             3765..4454
                     /locus_tag="U1041_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein CpsC"
                     /protein_id="HEM4767999.1"
                     /translation="MNNQEMNTIEIDILLLLKTIWRKKFLIIITALFGAGIAFVYSSF
                     LVTPQFDSTTRIYVVSQNVEAGAGLTSQELQAGTYLVKDYKEIILSQDVLTQVATELN
                     LNENLKEKVSVSIPVDTRIVSISVRDADPNEAARIANSLRTFAAQKIVEVTKVSDVTT
                     LEEAVPAEEPTTPNIKRNILLGLLAGGILATGIILAMEVLDDRVKRPQDIEEVMGLTL
                     LGVVPDSKKLK"
     gene            4464..5150
                     /locus_tag="U1041_000879"
     CDS             4464..5150
                     /locus_tag="U1041_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HEM4768000.1"
                     /translation="MATLEIARTKREIVNKTEEYFNAIRTNIQLSGADIKVVGITSVQ
                     SNEGKSTTAASLAIAYARSGYKTVLVDADIRNSVMPGFFKPITKITGLTDYLAGTTDL
                     SQGLCDTDIPNLTVIESGKVSPNPTALLQSKNFENLLATLRRYYDYVIVDCPPLGLVI
                     DAAIIAQKCDAMVAVVEAGHVKRSSLKKVKEQLDQTGTPFLGVILNKYDIANEKYSEY
                     GNYGHYGKKA"
     gene            5189..5920
                     /locus_tag="U1041_000880"
     CDS             5189..5920
                     /locus_tag="U1041_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine protein phosphatase"
                     /protein_id="HEM4768001.1"
                     /translation="MIDIHSHIIFGVDDGPETIEESLSLIGEAYRQGVRYIVATSHRR
                     KGMFETPEKVIMTNFLQLKAAVAEVYPEIRLCYGAELYYSKDILSKLEKKKVPTLNGS
                     RYILLEFSMNTPWKEIQEAVNEVTLLGLTPVLAHIERYDALAFHAERVEELIDKGCYT
                     QVNSNHMLKPALIGDRAKEFKKRTRYFLEQDLVHCVASDMHNLSSRPPFMREAYKLLT
                     EEFGKDKAKALLKKNPLMLLKNQAI"
     gene            5949..7775
                     /locus_tag="U1041_000881"
     CDS             5949..7775
                     /locus_tag="U1041_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM4768002.1"
                     /translation="MDLGTVTDKLLERNSKRLILMCMDTCLLIVSMILSRLFLDVIID
                     IPDERFILAVLFVLIFYLIISVRLKVFSLITRYTGYQSYVKIGLSLISAYSLFLIISM
                     ILWQTFSYRFILVSLFLSYVMLITPRIVWKVLHETRKNVIRKKDSPLRILVVGAGDGG
                     NIFINTVEDRKLNFEIVGIIDRDPNKLGTFIRTVKVLGNHNDIPRLVEELAVDQVTIA
                     IPSLNGKEREKIVEICNTTGVTVNNMPSIEDIMAGNMSVSAFQEIDVADLLGRPEVVL
                     DQDELNQFFKGKTILVTGAGGSIGSELCRQIAKFTPKRLLLLGHGENSIYLIHRELLE
                     KYQGKIELVPLIADIQDRELIFSIMADYQPDVVYHAAAHKHVPLMEYNPHEAVKNNIF
                     GTKNVAEAAKTAKVAKFVMVSTDKAVNPPNVMGATKRVAEMIVTGLNEPGQTQFAAVR
                     FGNVLGSRGSVVPLFKEQIRKGGPVTVTDFRMTRYFMTIPEASRLVIQAGHLAKGGEI
                     FVLDMGEPVQILELARKVILLSGHTEEEIGIVESGIRPGEKLYEELLSTEERVSEQIY
                     EKIFVGRVTNKQSDIVNSFINGLLQKDRNELKDVLIEFAKQE"
     gene            7861..8577
                     /locus_tag="U1041_000882"
     CDS             7861..8577
                     /locus_tag="U1041_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4768003.1"
                     /translation="MLGHRLVREKENRTKGGLYHKVQIELAFNSNHIEGSQLTHDQTR
                     YIYETNTIGFEENSTIKVDDIIETTNHFTAFDFLLDSFQDDLKETWIKEIHAILKRGT
                     SDSRKSWFQVGDYKSYPNEVGGRKTTLPEKVESDMQELLNSYHRLPETSFEDILDFHV
                     RFERIHPFQDGNGRVGRLIIFKECLKHGHVPFIIGDDMKYFYYRGLAEWGEQNGFLLD
                     TCLAAQDRFKQYLEYFRVED"
     gene            8595..9194
                     /locus_tag="U1041_000883"
     CDS             8595..9194
                     /locus_tag="U1041_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003075244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEM4768004.1"
                     /translation="MYPIIKRILSVIISGCSIIVLSPVLLLVALAIKLDSKGPVLFKQ
                     KRVGKNKKYFMIYKFRSMYVDAPSDMPTHLLKDPNAMITKVGGFLRKTSLDELPQLFN
                     ILKGEMAIVGPRPALWNQYDLIEERDKYGANDIRPGLTGWAQINGRDELEIDEKSKLD
                     GYYVQNMSLGLDIKCFFGTFLSVAKSEGVVEGGTGQKGK"
     gene            9194..10048
                     /locus_tag="U1041_000884"
     CDS             9194..10048
                     /locus_tag="U1041_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003075242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEM4768005.1"
                     /translation="MKRVLITGANSYIGTSFEKYVLEKGIDFEIDTLDLLEPNWKDYD
                     FSGYDSVFHVAGIAHFSKDESKKELYYKVNTELTEHVAKIAKQAGVGQFIFMSSIIVY
                     GDSTSGERVITKDTQPAPSDFYGDSKLQAEQRLEKLVGDNFRVVILRPPMIYGKGSKG
                     NYPKLSKLAQKTLVFPDFSNSRSMLHIDNLCEFIKQIIDLELSGLFCPQNSEYVNTSK
                     LVEAIAEVHGKKIYFTKTFNPIIKFFFHLDTVKKVFGNLVYEKEMSRYTFEYQINNFE
                     ETIRLTEE"
     gene            10065..11270
                     /locus_tag="U1041_000885"
     CDS             10065..11270
                     /locus_tag="U1041_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016621495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4768006.1"
                     /translation="MKKHILVVSQYFYPEQFRINDICTKLVERGYKVTVLTGIPNYPT
                     GSYYDGYHFFSKGEVFNGVEILRIPLIPRGKNKIGLVLNYLSFVLSGYVWAKLTKVDA
                     DAVFIYEVSPMTQALPGIWYSSKRNIPVLLYVMDLWPENVQIVGGIHNAQVIKYLDRM
                     VDYIYHNVDKILTSSQSFMKKIKQRGIDRDKLVFWPQYAEDYYSPVRVRIENEIVYGN
                     NLNITFAGNIGEAQGLGILPEVALELKNSDVTVMFNIIGEGRYKSTLIQEIERLKVES
                     CFNFVGQRKPEEIPYYFANSDASLIILAKNELFDMTIPAKLQSTMACGIPIIASLNGE
                     AAQIIKESQAGLVSEAGDVRGLIDNILEFSKLTHDKKEIFGMNALHYSETYFNRESLL
                     DELEKLVSE"
     gene            11296..12492
                     /locus_tag="U1041_000886"
     CDS             11296..12492
                     /locus_tag="U1041_000886"
                     /inference="COORDINATES: protein
                     motif:HMM:NF024831.1,HMM:NF025072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4768007.1"
                     /translation="MKILQVNTVISYGSTGIICQNIARGLIANGHDCLTVYGRGNDVE
                     DIPTKKIGNKFEQGLHYLRSHFLDQHGLGSRFATRQLIQIIRDYQPDVIHLHNIHGYY
                     VNYRILFEELRALAIPVVWLLHDQWAISGGSATSLEIIDNIYEIPKTATRSKGERRQY
                     PSLSRFSINHYYHNINYKNKYFTSLSQLTLVTPSKWLGDIVKKSFLSEIPLITIYNGV
                     NTNAFVEKTEETNERITILGVANAWSNDKGLGYFCRLSKDLGDKYRIILVGLDDKIST
                     PAKIIRVGKIDNKELLKYYQKADVFVNPTLRDNFPTVNIEAQLCGTPVITFDTGGAKE
                     AICTQTGKIVVQGDYEQLFVAITSMIPKNKYIATKTREHALAFSVENMVNDYIKLYQE
                     VVVCKL"
     gene            12508..13650
                     /locus_tag="U1041_000887"
     CDS             12508..13650
                     /locus_tag="U1041_000887"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4768008.1"
                     /translation="MEKKIGNVLFLTNVPSPYRVRFFDELGKHCNLTVLYQKKASSER
                     NEKWVEKEEGHYRSVFLTGISTGVDNAFCPSVVRYLNKTFDHIIICGISSPTEIFAIL
                     WCQFRGIPYYIEGDGAFVNDGNTIKGKLLSIFKKALIKPSIINFSTCIEHDKYYLCYG
                     SHKSRIARYRFSSISSNEILKNPIDLTSKQNLRNKLGVTEKKIVLYVGQFIPRKGLDI
                     LLHAATHFKNQSVGFYLIGSDVPREYLLLKAELGLDNVYFESFKTKDELKEYYLMSDV
                     FVLPTREDIWGLVVNEAMANGLPVVTTDRCNAGLELIKDGKNGYIVSVENSTSLAKAI
                     KHILASEGMGFAALEVIRDYTIETMVEDHIRILKKHEEKINGDECI"
     gene            13631..15022
                     /locus_tag="U1041_000888"
     CDS             13631..15022
                     /locus_tag="U1041_000888"
                     /inference="COORDINATES: protein motif:HMM:NF016800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEM4768009.1"
                     /translation="MEMNVYKSSQLERVVATLYLYFLPLRMIAPLSFLPNVFSGMAES
                     FDFVFHIIGLFLYLIYSHGVLRISTSKEYNLFNYFLFAILTLNLSSIIMANFIQLTYG
                     NYAEESAYSGILGMLLYFTQYALIVAYNIRVFNVLTLEKIQKILRNVCLFLLMLGYFQ
                     IFVLRFEGFFRELLNTIDFLDILWPEDTMWKLPLTSKEGAGAGVIFGAFVLPYLLALY
                     NKYTHKRYIIELLLWVPVLIMMNSTSAYFMVIAALIVFIFIDYQTNQRHSFVIAFVGF
                     LVLMITVLSLVGGANILYRILPNDISYLILEKTTDLTNGSTVSRLVPIVTNWNIFLNF
                     PLLGVGNGLQGYFYTTFFPEWAINVTGSDVMTFYTIAQSTIVNGGLFFPSLLSGYGIV
                     GFIIFIGLVKRIINKINSQDISDDFFIVFYKIAVFAIIIGGFQVDFVGDYVTWFVLSV
                     PFFYRKRIGNESL"
     gene            15103..16377
                     /locus_tag="U1041_000889"
     CDS             15103..16377
                     /locus_tag="U1041_000889"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768010.1"
                     /translation="MKKREKKKILVVMDSYPPTSSPNDICMDNVIQELKINYTVFCLV
                     KKKMGDKKYKEVDGVNVISYSKGPIDSFISWGLEHQNKLLSKTASTAKFLLTRVNQLF
                     TIPIYPIFWPFYQIRLAYKLLKECRKNNIHAVIAVCFPPESLFAGRFVKNKIRDLVYI
                     PYFIDAYSCGTYPKYISYKFAFSRKLGYEKWLTDNADEVIMMESSQSFHQKFSLQQIE
                     RYTFLNPPFLKEHDVEVVDFHPLLEEGKINIVYTGYLYLPDRDPSYIIDLISSWNRKD
                     VVLIFVGGGNCSDIIESKKTTFNGTLKHSNFLPHDEILTLLAGANVLLNLGVSNSNAI
                     SGKIFEYMSFGKPILTTYFKDDDASLMYLDKYPLSFTINQTQLSLEEASVESLVFVEK
                     HLGEQAEFGKIEKIFYNSTPEAVVRRIREHLL"
     gene            16374..17669
                     /locus_tag="U1041_000890"
     CDS             16374..17669
                     /locus_tag="U1041_000890"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4768011.1"
                     /translation="MKIGILFDDVGKAGLDYSAPPEGNPGVGGTQYCFLMLMYYLSNI
                     QQEDEIIVYCWNHKGSVFPKNKNLHIKYINEPEEAIELSVKDTIDIFLFNFSHMLTFQ
                     SLLEKSSLRCITWVHNWVRGKLLNAMVECSAVKRVVFLGQEHYDRYIDSPIMDKAVVL
                     PNMFNTEGYIRRDKDLSAVVTYVGALIPSKGFHALAAVWKDVIRAFPEAKLYVLGAGN
                     LYGTVDGGIEPVFGKLGIADREYEEQFLKYITDKDGKLLPSIHFLGNVGREKIDIYKK
                     TKVGIVNPTGRTEVCPISALEMGAAEVPVISKNINGLPDVVINGQTGLLVNSKKQLTQ
                     SIIELLSDDEKNKQLGEHARNHVFSNFNPENITQQWVRVFKDMLEDGEVEVISPSKNM
                     RNNFKWARVVLYNLKKIPLFHNLPAMIEIEDWISKRLYG"
     gene            17662..19170
                     /locus_tag="U1041_000891"
     CDS             17662..19170
                     /locus_tag="U1041_000891"
                     /inference="COORDINATES: protein motif:HMM:NF014051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEM4768012.1"
                     /translation="MDKKRLSLNLIASIFSYALSIFFSFYLTPYLVNHLGKELYGFYG
                     IANNLVSYIMVISMALNSMAAKYITVELVKGEKVRAKQYFTSIFISNVALSLVLVPIL
                     VILTIHLQDFLSISVGHLRQVQFLFAFVFLAMLIRLVSSIYGTATYAANRIDIRSYIE
                     MGKSILRVALYVVIFSLLDASIVHVGFILLVLELFNSIIQISLSKKLLPEMTIDFSYF
                     DIKLVFSTLKVGIWNSVNQLGDLLLSSSGLVLTNIWLGEVASGNVSIIQTMPALISGI
                     ITAINGVFMPRIAHKYAVSKTSDLLDEVQMSQRVTGAIITPIIILLMVFSYEFYNLWV
                     PGNDIELLQKLSIIDIARMMIIGVNWPVLNLTIVTDKVKFPSIVLIGLGVLNILIVNL
                     LISFTNLGVFAIVLSTLIITILFYGIAIPLYSSFIIKQPWSALYKPICQMIVATTVML
                     PVTLYIHSLFSIHSWKDFILSGFMAAVVSYTISICVFIGPKFIFKLIPKCYK"
     gene            19184..20221
                     /locus_tag="U1041_000892"
     CDS             19184..20221
                     /locus_tag="U1041_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM4768013.1"
                     /translation="MSLFSGKTLLITGGTGSFGNAVLNRFLATDIAEIRVFSRDEKKQ
                     DDMRHEFQAKMPEVAHKISFYLGDVRDLQSVKNAMHDVDYVFHAAALKQVPSCEFFPI
                     EAVKTNVIGTENVLTAAIDAGVESVICLSTDKAAYPVNAMGTSKAMMEKVVVAKSRTT
                     TKTKICCTRYGNVMCSRGSVIPLWIEQIKSGQPLTITDGSMTRFIMSLEEAVDLVLFA
                     FENGQPGDILVQKAPACTIQTQAEAVCELFGGDKEAIRVIGVRHGEKMYETLLTNEEC
                     ANAIDLGDFYRVPCDNRNLNYDKYFNQGDVERNPLTEFNSNNTELLSVEQTKEKIASL
                     AYIQEEMAKLG"
     gene            20228..21403
                     /gene="wecB"
                     /locus_tag="U1041_000893"
     CDS             20228..21403
                     /gene="wecB"
                     /locus_tag="U1041_000893"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014571812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEM4768014.1"
                     /translation="MTKYTEVNWKNNGKLKLLIIVGTRPEIIRLSEVIKKTRRYFDVV
                     LAHTGQNYDYNLNGIFFHDLNLEEPEVYLNAVGSDLGETMGNIIAESYKLMVAIQPDA
                     VLVLGDTNSCLSVIGAKRLHIPIFHMEAGNRSKDECLPEETNRRIVDIISDVNMAYSE
                     HARRYLADNGLPKERTYVTGSPMAEVLRVNLEKIESSDIHQRLGLEKGRYILLSAHRE
                     ENIDTDKNFISLFTAVNKMAEKYDMPILYSCHPRSKNKLESSGFVLDKRVIQHEPLGF
                     HDYNCLQMNAYAVVSDSGTLPEESSFFTSVDKPFPAVCIRTSTERPEALDKADFILSG
                     IDEIGLLQAVDVAVAMNEHKHLGLPVPDYVDENVSDKVVKIIQSYTNIVNKMVWRKY"
     gene            21415..22611
                     /locus_tag="U1041_000894"
     CDS             21415..22611
                     /locus_tag="U1041_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001028293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEM4768015.1"
                     /translation="MKILVTGAKGMVGTALVNHLKTIQSGKNRTRPNIHIQSIFEYDI
                     DSTIEELEQYCQEADFVFNLAGVNRPENIEEFMQGNFGFASQLLEQLKKYNSKAPIML
                     SSSIQATLIGRYGDGEYGKSKLAGEELFFQYGQEQGVKVAVYRFPNLMGHSRPNYNSA
                     VSTFCWAIANDQSYSVSDPKAEVELLYIDDLVDGMLDLLEGKEVYCNYEGLTPVEDIS
                     GKYAWIPTTHRVTLGEIIALLESFKQQPLTLMMPKIPANSFAKKLFSLYLTYLPTEKF
                     KYGLKMNVDDRGSFTELLHTADCGQVSINISKPGITKGQHWHSSKWEQFIVVSGRGLI
                     QQRNIVTGEFVEFEVSGDTIEAIYMIPGWTHNIINLSDTENLVTVMTCNEIFDPNRPD
                     TFFEEV"
     gene            complement(23101..>23242)
                     /locus_tag="U1041_000895"
     CDS             complement(23101..>23242)
                     /locus_tag="U1041_000895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEM4768016.1"
                     /translation="LTCLTSDARGGRRHAYMTVEEEQTFLSEQLASAVNGEFVTVETS
                     LG"
BASE COUNT         7397 a         3589 c         4878 g         7378 t
ORIGIN      
        1 acaattttgg aatgtagttt ccactatata gaataatccc cctcgtctct taagttcgag
       61 ggggattatt tgtatgagat tattggattt cattcattca aatatcttac gaattgctcc
      121 agtttatctg caaaatcttg ttcaaagaag atctgtaaga aatcagcttt ctgtccgctg
      181 aaataataac acttttcaaa catgtgttgg atgctaggag aaagaatccc cttgcttagc
      241 tgaaaggtca cgctcccttt ggaaattcga tacgggatgt tcaaagcgta tttctctaaa
      301 caatctttta ttttattcca ctgagcgtga taaatgtgat gaagatgctg tgtgttccgt
      361 gcaaacatac cgttatcaat gtagagcgag agagcttttt gcatgataag attggtatcg
      421 tagtcgatta gacttttatg tttgatgaag gtatcatgta gctgattagg aaggctgatt
      481 gcaccgattc ggagggcagg aaagagcatc ggtgtaaaag attttatgta gatgacacga
      541 ttatctgtat caagatagtg taaaggtagg ctatgactag agtcgaaatc cgccaaatag
      601 tcatcctcaa tgatgtagac atcgtattgc tttgctaatt ttacgatagc tgtttttgtt
      661 gctatatcat aggttgaacc gagagggttg tgcaagcgag gaattgtgta gaaaaacttg
      721 atttttccag tttggaagat actttccaat tcttctaggt caattccatc taaatcccgt
      781 tcaattgttt gataggggat tccttgatgt cgaatgagct ctatcattcg tgaataggta
      841 gggttctcta tcaagatttc cgtttttcca gcccaggttt ccatttgtgt gagaatatat
      901 agagcttgtt gactaccagc tgtgataacc agttggtctt tttttgtata gacatgatag
      961 tccattaaca gactttgaac ggaggaaatc aattctgcta atccctcttg ctggtgatag
     1021 tagttgaata ggtaattttc ccgcccaata agactttcgt ttagacaaat ccgaaaatct
     1081 tcatagggta attcttgaaa gtcagcagga ttgagctcta cagtatggtc ttggaaatct
     1141 ctatcttcta agatataata accgcttttt tcgacagcgt agatcttatt ttggtatttt
     1201 aattccaaca tagccttttg gacagtgtct ttgctacaat gatattgctc gctgagttga
     1261 cggatagaag gtaatttctc tccacgtttg aatcggtgtt cctctattcc agtcaaaata
     1321 tcttggatga taacttgata ttttttcatc taggccccct tttttataga ctatgttact
     1381 agctagtata taggaaaaat tgaagaaaga caacatctgg atggggttga gtttcaggaa
     1441 ttaagctact ctatggtata attaagtgat gaaaataatt atacctaatg caaaagaagt
     1501 aaatacaaat ctagagaatg cctcgtttta tcccctgtct gatcgaagta agccgatgct
     1561 ggatgccata agtcaatttg atgtaaaaaa gctggctgcc ttttataaat tgaatgaagc
     1621 aaaggctgag ttagaagctg accgttggta tcgaatcagg acaggtcaag caaaaaccta
     1681 tccagcctgg cagttatatg atggtcttat gtatcgttat atggataggc gagatataga
     1741 ttcgaaagaa gaaaattatc tacgtgacca tgttcgtata gcgacagcct tatacggatt
     1801 gattcatcct tttgaattca tttcacctca ccgcttagat tttcaaggga gcttaaagat
     1861 aggcaatcag tctttgaaac agtactggcg accgtattat gaccaagaag ttggtgatga
     1921 tgaactgatt ctctcgctgg cttcgtcaga atttgagcag gtattttctc cacagattca
     1981 gaaaagatta gttaaaattc ttttcatgga agaaaaagca ggtcagctaa aagttcactc
     2041 gactatatca aaaaaaggta gaggaagatt gctgtcctgg ttggctaaga acaatattca
     2101 ggaattatcg gatattcaag attttaaggt ggatggcttt gaatattgta cttccgaatc
     2161 aacggcaaac caacttacct tcatacgatc aatcaaaatg tgaaattatg aaaaagataa
     2221 cgttttccag cactaagtaa ggataggaaa atattaattt ctatgatata atgggtgcgt
     2281 tataagtaaa agtctaggaa ggttgtttat gaaaaagaga agcggacgaa gtaagtcgtc
     2341 caagttcaaa ttggtaaatt ttgcgctttt gggactttat gccattactc tatgtttgtt
     2401 cttagtgacc atgtatcgct ataacatcct agatttccgg tatttaaact atattgtgac
     2461 gcttttgcta gtaggagtgg cagtattggc tggattattg atgtggcgta agaaagcgcg
     2521 catatttaca gcattcttac ttattttttc actagtcatc acttccgtcg gaatctatgg
     2581 gatgcaagaa gttgtaaaat tttcaacacg gctaaattca aattcgacat tttcagaata
     2641 tgaaatgagc atccttgtcc cagcaaatag tgagattaca gatgttcgtc agcttactag
     2701 tattcttgct ccagccgaat acgaccaaga gaacatcacc gctttattgg atgacatatc
     2761 caaaatggaa tctactcaac tagcaactag ccccgcgacc tcatacctga cagcctacca
     2821 atctatgata aatggtgaga gtcaagcgat ggtcttcaac ggagttttta ccaatatttt
     2881 agaaaatgaa gatccagact tttcttcaaa agtgaaaaaa atatatagtt tcaaagtgac
     2941 tcagactgtt gaaacagcta ctgagcaggt gagtggagat agttttaata tctatataag
     3001 tggtatagat acttacggtc caatttcatc tgtttcgcgt tcagatgtca atatcattat
     3061 gactgtcaat cgtgcgacac ataagatttt attgacaact actccacgag attcatacgt
     3121 tgctatcgca gatggtgggc aaaatcaata cgataaacta acacatgctg ggatttatgg
     3181 tgttaacgcc tcagtgcaca ccttagaaaa tctttatggt attgacatta gtaactatat
     3241 ccgactcaac tttacttcct tcttgcagtt gattgatttg gttggtggta ttgatgttga
     3301 aaatacccaa gaatttacaa gcggagggta taatttccct gttgggacag tacatctaga
     3361 cgcagagcaa gcgctaatct ttgttcgtga gcggtattcg ttggctaatg gtgataatga
     3421 ccgtggtaaa aaccaagaaa aagtcattgc agccctcatc aaaaaattga gttcaccaga
     3481 gaatttacgt aattatcaag ctattttaaa tagtttagaa gattctattc aaacggatat
     3541 aagtattgaa acaattatag gcttggtaaa tacccaatta gaatcaggaa cacaatttac
     3601 agtagagtca caagcattga caggaacagg acgctcagat ttatcttctt atgcgatgcc
     3661 tggatcacaa ctttatatga tggaaattaa ccaagatagt ctggagcaag caaaggcggc
     3721 gattcagtca gtattggatg gaaattaaaa aaataggaga aaacatgaat aatcaagaaa
     3781 tgaatacaat cgaaattgat attttactct tactgaaaac gatttggaga aagaaatttc
     3841 ttattatcat cacagctctt tttggagcag ggattgcttt tgtctatagt agttttttag
     3901 taacccctca atttgactcc actacacgga tttatgtagt cagtcaaaat gttgaagccg
     3961 gtgcgggatt gactagccaa gagttacaag cgggtaccta tttggtaaaa gattataagg
     4021 aaattatcct atcacaagat gtactgacgc aggtagctac agagttgaac ttgaacgaga
     4081 acttaaaaga aaaggtttca gtttctattc ctgttgatac tcgtatcgtt tctatttccg
     4141 tgcgtgatgc ggatccaaat gaagcggcac gtattgcaaa tagccttcgc acctttgcag
     4201 cgcaaaagat tgttgaggtc accaaggtaa gcgatgtgac gacacttgaa gaagcagtcc
     4261 cagcggaaga accaaccact ccgaatataa aacgcaatat cttgcttggt ttattagctg
     4321 gaggtatctt agcaacggga attatcttgg ctatggaagt tttggatgac cgtgtcaaac
     4381 gccctcagga tattgaagag gtaatgggct tgaccttgct tggtgtagta ccagattcga
     4441 agaaattgaa ataggagaac aatatggcaa cgttagaaat tgcgcgtaca aaaagagaga
     4501 tagtaaataa aaccgaggag tatttcaatg ccatccgtac caacattcag cttagcggag
     4561 cggatattaa ggttgttggc attacctctg ttcaatcaaa tgaaggtaag agtacaactg
     4621 cggctagtct cgctattgcc tatgctcgtt caggttataa gaccgttttg gtggatgcag
     4681 atatccgaaa ttcagtcatg cctggtttct tcaagccaat tacaaagatt acaggcttga
     4741 cggattacct agcagggaca acagacttgt ctcaaggatt atgcgataca gatattccaa
     4801 acttaaccgt cattgagtca ggaaaggttt ctcccaaccc tactgccctt ttacaaagta
     4861 agaattttga aaatctactt gcgactcttc gtcgctatta tgattatgtt atcgttgact
     4921 gtccaccatt aggactggta attgatgcag ctatcattgc acagaaatgt gatgcgatgg
     4981 ttgcagtagt agaagcaggc catgttaagc gctcatcttt gaaaaaagta aaagagcagt
     5041 tggatcaaac aggcacaccg ttcttaggcg ttatcttgaa caaatatgat attgccaatg
     5101 agaagtatag tgaatacgga aactacggac attacggcaa aaaagcttaa tttctcagat
     5161 aatataagtt tgataagtag gtattagtat gattgatatt cattcgcata tcatatttgg
     5221 tgtggatgac ggtcccgaaa ctattgaaga gagcctgagt ttgataggcg aagcttatcg
     5281 tcaaggtgtt cgctatatcg tagcgacatc tcatagacga aaagggatgt ttgaaacacc
     5341 agaaaaagtt atcatgacta actttcttca acttaaagca gcagtagcag aagtttatcc
     5401 tgaaatacga ttgtgctatg gtgctgaatt gtattatagt aaagatatct taagcaaact
     5461 tgaaaaaaag aaagtaccca cacttaatgg ctcgcgctat attctcttgg agttcagtat
     5521 gaatactccc tggaaagaga ttcaagaagc agtgaatgaa gtgacgctac ttgggctaac
     5581 tcccgtactt gcccatatag aacgatatga tgccctagcg tttcatgcag agagagtaga
     5641 agagttaatt gacaagggat gctatactca ggtaaatagt aaccatatgc tgaagcctgc
     5701 tttaattggc gatcgagcaa aagaatttaa aaaacgcact cggtattttt tagagcagga
     5761 cttagtacat tgtgttgcta gcgatatgca taatttatct agtagacctc cgtttatgag
     5821 ggaggcttat aagttactaa cagaggaatt tggcaaagat aaagcgaaag cgttgctaaa
     5881 aaagaatcct cttatgctat taaaaaacca ggcgatttaa actggttact ctagattgtg
     5941 gagaaaaaat ggatttagga actgttactg acaaactgtt agagcgcaac agtaaacgat
     6001 tgatactcat gtgcatggat acgtgtcttc ttatagtttc catgattttg agcaggctgt
     6061 ttttggatgt tattattgac attccagatg aacgctttat tcttgcagtt ttatttgttt
     6121 taatattcta cctgattatc tcagttagac taaaggtttt ttcgttaatt acgaggtata
     6181 ctggatatca aagttatgtg aaaataggac tgagtttgat atccgcttat tcattatttt
     6241 taatcatttc aatgattcta tggcagacct ttagttatcg tttcatctta gtgtccttat
     6301 ttttgtcgta tgtaatgctc attactccga ggattgtttg gaaagtctta catgagacga
     6361 gaaaaaatgt cattcgaaag aaggatagcc cactaagaat cttagtagta ggtgctggag
     6421 atggcgggaa tatcttcatc aataccgtcg aagatcgaaa attgaatttt gaaattgtcg
     6481 gtataattga tcgtgatcca aataaacttg gaacatttat ccgtaccgtc aaagttttag
     6541 gaaaccacaa tgatattcca cgattggtag aggaattagc tgttgaccaa gtgacgattg
     6601 ccatcccttc tttaaatggt aaggagcgag agaagattgt tgaaatctgt aacactacag
     6661 gagtgaccgt caataatatg ccgagcattg aagacattat ggcggggaac atgtctgtca
     6721 gtgcctttca ggaaattgac gtagcagacc ttcttggtcg accagaggtt gttttggatc
     6781 aggatgaatt gaatcagttt ttcaaaggga aaacaatcct tgtcacagga gcaggtggct
     6841 ctatcggttc agagttatgt cgtcaaattg ctaagtttac gcctaaacgc ttgttgttgc
     6901 ttggacatgg agaaaattca atctatctca ttcatcgaga gttactggaa aagtaccaag
     6961 gtaagattga gttggtccct ctcattgcag atattcaaga tagagaattg atttttagca
     7021 taatggctga ttatcaaccc gatgttgttt atcatgctgc agcacataag catgttcctt
     7081 tgatggaata caatccacat gaagcagtga agaataatat ttttggaacg aagaatgtgg
     7141 ctgaggcggc taaaactgca aaagttgcca aatttgttat ggtttcaaca gataaagctg
     7201 ttaatccacc aaatgttatg ggagcgacta aacgtgttgc agaaatgatt gtaacaggtt
     7261 taaacgagcc aggtcagact caatttgctg cagtccgttt tgggaatgtt ctaggtagtc
     7321 gtggcagtgt tgtgccgcta ttcaaagagc aaattagaaa aggtggacct gttacggtta
     7381 ccgactttag gatgactcgt tatttcatga cgattcctga ggcaagtcgt ttggttatac
     7441 aagctggaca tttggcaaaa ggtggagaaa tctttgtctt ggatatgggt gagccagtac
     7501 aaattttgga attggcaaga aaagttattc tgctgagtgg tcatactgag gaagaaatcg
     7561 ggattgtaga atctggaatc agaccaggcg agaaactcta cgaggaatta ctatcaacag
     7621 aagaacgtgt cagcgaacag atttatgaaa aaatatttgt aggtcgcgtt acaaataagc
     7681 aatcggacat tgtcaattca tttatcaatg gattactcca aaaagataga aatgaattaa
     7741 aagatgtgtt gattgaattt gcaaaacaag aataaagaaa gtaaaagata tttttacttt
     7801 cctagagttt aaacgatgtt taaattctag gaaggttgaa aaactttcca gaggtaagat
     7861 atgttaggtc ataggttagt aagagaaaaa gaaaacagaa cgaaaggtgg tctctatcat
     7921 aaggttcaga tcgagctggc tttcaactca aaccacatcg aaggcagtca actaactcat
     7981 gaccagacac ggtatatcta tgagaccaat acgattggtt ttgaagaaaa ttcaaccata
     8041 aaggtggatg atattatcga aacgaccaat cattttacgg cttttgattt tctcttagat
     8101 agctttcaag atgatttgaa agaaacttgg ataaaggaga ttcatgctat cttgaagaga
     8161 ggaacctcag attctcggaa atcatggttt caagtcggag actataagtc gtacccaaat
     8221 gaagttggcg gacgtaaaac gactttgcca gaaaaagtag aatccgatat gcaagaattg
     8281 ctgaacagct atcaccgctt gcctgagact tcctttgagg atattcttga ctttcatgtt
     8341 cgatttgaac gcatccatcc cttccaagat ggtaacgggc gagtggggcg attgattata
     8401 ttcaaagaat gtctcaaaca tggacatgtc ccctttatca tcggagatga catgaagtat
     8461 ttttactatc gtggcttagc cgagtgggga gagcagaatg gtttcttgct ggatacttgt
     8521 ctagcagcac aagatagatt taagcaatat ttggagtatt ttagggttga ggattaagga
     8581 ttaaggagat tggaatgtat ccgattatta agcgtatttt atctgttatt atttcagggt
     8641 gttccattat tgttttaagt ccagttctat tattagttgc actggcaatc aaactggatt
     8701 caaaaggtcc agtactattt aaacaaaaac gagttggtaa gaataagaaa tacttcatga
     8761 tttataagtt ccgttcaatg tatgtggatg caccaagtga tatgccaact catttattaa
     8821 aagatccgaa tgctatgatt actaaagtag gaggctttct tcgaaaaacg agtttagatg
     8881 agcttccgca actatttaac attttaaaag gtgaaatggc tattgtcgga ccacgtcctg
     8941 ctttatggaa tcaatatgac cttattgaag aacgtgataa gtacggggca aatgatatcc
     9001 gacctggatt aactggttgg gctcaaatta atggtcgtga tgaattggaa atcgatgaga
     9061 agtcaaaatt ggatggatat tatgttcaaa atatgagtct agggttggat attaaatgtt
     9121 tctttggaac tttccttagt gttgctaaga gcgaaggagt agtcgaaggc ggaacggggc
     9181 agaaaggaaa gtaatgaaaa gagtattgat aacaggagca aactcatata tcgggacatc
     9241 tttcgaaaaa tatgttttgg aaaaaggtat tgattttgaa atagatacct tggatttatt
     9301 agagcctaac tggaaagact acgatttttc agggtatgat tctgtttttc atgttgcagg
     9361 gatagcacat ttttctaaag acgaaagtaa aaaagaacta tattataaag taaatactga
     9421 actaactgag catgttgcga agattgctaa gcaagcaggt gttggtcagt ttatatttat
     9481 gagtagcatt atcgtttatg gtgatagtac gagtggggaa cgagttataa ctaaggatac
     9541 ccaacctgca ccttctgact tttatggcga cagtaaattg caagctgaac agagactgga
     9601 aaagttagtg ggcgataatt ttagggttgt cattctcaga ccaccgatga tttatggtaa
     9661 aggttctaag ggaaattatc ctaaactttc aaagttagct cagaaaacac tagtttttcc
     9721 ggatttttca aattctagga gtatgttaca tattgataac ctctgtgagt ttattaagca
     9781 aattatagac ttagagttga gtgggctgtt ttgtccccaa aattcagaat atgtgaacac
     9841 ttctaagtta gttgaagcaa tagctgaagt acatggaaag aaaatatatt ttacaaagac
     9901 gtttaatcca atcataaagt ttttcttcca tttagataca gtgaaaaaag tatttggaaa
     9961 tttggtttat gaaaaagaga tgagtcgtta tacttttgag tatcagataa ataattttga
    10021 agagacaatt agattaacgg aagaataatt aatgaggtga gtgtttgaaa aaacatatct
    10081 tagtagtatc tcagtacttc tacccagaac agtttagaat taatgatatt tgtacaaaat
    10141 tagtagaaag agggtacaag gttacggttt tgacgggaat tcctaactac cctactggct
    10201 cctactacga tgggtatcac tttttctcaa agggagaggt tttcaatggg gtagagattt
    10261 taagaatacc tttaattcct agaggaaaaa ataagattgg actagttcta aattacctca
    10321 gttttgtttt atcaggatat gtttgggcaa aattgactaa agtagatgct gatgcagtat
    10381 ttatttacga ggtctctccg atgacacagg cgctaccagg gatatggtat agttctaaac
    10441 ggaacatacc tgtactactt tatgtaatgg atttatggcc cgaaaatgtt caaattgtag
    10501 gaggaatcca taatgcacag gttattaaat atttagatag aatggtcgat tatatttacc
    10561 acaatgtaga taaaatcttg acttcctctc aaagttttat gaaaaaaatt aaacagaggg
    10621 gaatcgaccg agataagtta gtattctggc ctcaatatgc agaggattac tattcaccag
    10681 tgagagtgcg catagaaaat gaaatagttt atgggaataa tttaaatatt acgttcgctg
    10741 gaaatatagg agaagcacaa ggcttaggaa ttttaccaga agttgctctt gagttgaaga
    10801 atagtgatgt gacagttatg ttcaatatta ttggtgaagg tcgttataag agcacattga
    10861 tacaggaaat tgagcgttta aaagtagaaa gttgttttaa ttttgttggt caaagaaaac
    10921 cagaagaaat tccttattac tttgctaata gtgatgcatc gctgattatc cttgctaaaa
    10981 atgaattatt tgatatgact ataccagcta agctacaatc tactatggca tgtggtattc
    11041 cgattattgc ttcactgaat ggagaagctg ctcagattat taaagaatct caagctggct
    11101 tagtcagtga agctggagat gttagagggc tcattgataa tattttagag ttttcaaaac
    11161 tcactcatga caagaaggaa atttttggaa tgaatgcact acactatagt gagacctact
    11221 ttaacagaga aagtttgttg gatgagttgg aaaaactggt atcagaataa tgagtaactt
    11281 gaagagtgaa aaagtatgaa aattttacag gtaaatacgg taatctcgta tggctctacg
    11341 gggattattt gtcaaaatat agcgcgaggt ctgattgcga acgggcatga ttgtttgacg
    11401 gtatatggac gtggaaatga tgttgaagat attcctacaa agaaaattgg gaataagttt
    11461 gagcaaggac tccattattt acgtagtcat tttttagatc aacatgggtt aggttctcgt
    11521 tttgcaacac ggcagttaat acaaattatc agagattacc aaccagatgt tattcatttg
    11581 cataatattc acggttatta tgtaaactat aggattttat ttgaagaatt gcgtgcattg
    11641 gctattccag ttgtttggtt attacatgat caatgggcaa tttctggagg ttctgcgact
    11701 tcattagaga ttattgataa tatttatgaa atacctaaaa ctgctacgcg ttccaagggg
    11761 gagaggcgtc aatatccgtc attgtctaga ttttcgataa atcattatta ccataatata
    11821 aactacaaaa ataagtattt tacctcattg tctcagttaa ctctagtcac gccttcaaag
    11881 tggttaggtg atattgtgaa aaaatctttt ttatcagaga tccccttaat tacaatctat
    11941 aatggtgtga atacaaatgc atttgtagaa aaaactgaag aaactaatga gagaattaca
    12001 attctaggag ttgcgaacgc ttggtcgaac gataaagggc ttggatattt ttgtagatta
    12061 tcaaaagatc tcggggataa gtatagaatt attttggtag gtttggatga taaaatatca
    12121 accccggcaa aaattataag agttgggaaa attgataata aagaattact caagtattat
    12181 cagaaggcag atgtatttgt aaatccgact ttgcgcgata actttccgac ggttaatatt
    12241 gaagctcagc tatgtggaac accagttatc acctttgata ctggaggagc gaaagaagcg
    12301 atatgcactc agactgggaa gatagttgtt caaggggatt atgaacagtt gtttgttgca
    12361 attacctcga tgattcctaa aaataaatat atagcaacga agacaaggga gcatgcatta
    12421 gcgtttagtg tggagaatat ggttaatgat tatataaaat tataccaaga ggtcgttgtt
    12481 tgtaaattat agaggagata gtgagaaatg gagaaaaaaa tagggaatgt tctgttttta
    12541 acaaatgttc cttcccctta tcgagtacgc ttttttgatg aattaggaaa acattgtaat
    12601 ttgacagtgt tatatcaaaa gaaagcctcg tctgaaagaa atgaaaaatg ggttgagaaa
    12661 gaagaagggc attatcgtag tgtctttctg accggaatat ctactggagt tgataatgca
    12721 ttttgtccaa gcgtagtgag gtacctaaac aaaacttttg accatataat catttgtgga
    12781 atttcttcgc ctactgaaat ctttgcaata ttgtggtgtc aatttagagg aataccctac
    12841 tatatcgagg gggatggggc ttttgtgaat gacgggaata caatcaaagg aaaattattg
    12901 tcaattttta aaaaagctct tattaagcca agtataatca atttttcaac ttgcatagag
    12961 catgataaat attatttatg ttatggttct cataaatcaa ggatagctag gtatagattc
    13021 tcttctattt cttctaatga gattttaaaa aatccaattg atttgacatc taaacaaaac
    13081 ttaagaaata aattgggagt gacagaaaaa aaaattgtcc tatatgttgg gcaatttata
    13141 cctagaaaag ggctggatat tttattgcat gcggcaacac attttaagaa tcaaagtgtg
    13201 gggttttatt tgattggtag tgatgtccca agagagtacc tgcttttaaa ggctgaactt
    13261 ggtttagaca atgtttattt tgaatctttc aaaacgaaag atgaactaaa agaatattat
    13321 ctgatgtcgg atgtgttcgt cttgcccacc agagaagaca tttggggctt ggttgtcaac
    13381 gaagcgatgg ctaatggttt accggttgta acaactgaca ggtgcaatgc tggcttagag
    13441 cttattaaag atggaaaaaa tggctatatt gtatcagtag aaaatagcac gagtttggca
    13501 aaagcaataa aacatatact tgccagtgag ggaatgggat ttgctgcgtt agaagtgatt
    13561 agagactata caattgaaac aatggttgag gatcatatta ggattttaaa aaaacatgag
    13621 gagaagataa atggagatga atgtatataa aagtagtcaa ttagaacggg ttgtagctac
    13681 tttatatttg tactttcttc cgttgcggat gattgcaccg ctttcttttt tacctaatgt
    13741 attttcaggg atggcagaga gttttgattt tgtcttccat attattggtc tttttctcta
    13801 tcttatctat tctcacggtg tgcttagaat tagtacctcc aaagaataca atctattcaa
    13861 ttactttttg tttgcaattc tgactttgaa tctatcctct attatcatgg ctaattttat
    13921 acaacttacc tatggaaatt atgcagagga aagtgcctat tctgggattt taggaatgct
    13981 tctttacttc actcaatatg ctttaatagt tgcttataat ataagagtat tcaatgtgtt
    14041 aactctggaa aaaatacaaa aaattttaag gaacgtatgc ctgtttttac tcatgttagg
    14101 ctatttccag atttttgtcc taagatttga agggttcttc agagaacttc taaataccat
    14161 tgatttttta gatatattgt ggccagaaga tacaatgtgg aagttgcctt taactagcaa
    14221 agagggtgca ggtgcgggcg ttatttttgg tgcctttgtg ttgccttatc ttcttgctct
    14281 gtataacaag tatacccata agagatatat tattgagttg ttgttatggg tgccagtctt
    14341 aattatgatg aatagtacaa gtgcgtattt catggtaatt gctgccctta tagtattcat
    14401 cttcatagac tatcaaacaa atcagagaca tagctttgtt attgccttcg ttggctttct
    14461 tgtgctgatg atcactgtat tgagtttagt tggaggagcg aatattttat atcgtatctt
    14521 accaaatgat atcagctatt tgatactaga aaaaacaaca gacttaacaa atggctccac
    14581 tgtttctcgt ttagttccga ttgtcaccaa ctggaatatc tttttgaatt ttccattgct
    14641 tggtgtagga aatgggttgc aaggctattt ttatacgaca tttttccctg aatgggcaat
    14701 caatgttact ggtagtgatg ttatgacatt ttatacgata gcccagtcaa caattgtcaa
    14761 tggaggacta ttcttcccta gtctcttatc agggtatggt attgtaggat tcataatatt
    14821 cattggtctt gtcaaacgta taataaataa aataaattcg caagacataa gtgacgattt
    14881 ctttattgtt ttctataaaa ttgctgtatt tgcgataatt ataggaggtt ttcaagtgga
    14941 ctttgttggg gattatgtca cgtggtttgt attgagtgtt ccattttttt acagaaaacg
    15001 gatagggaat gaatctttat aaaaataaaa gatacataat gctgcgacac tatattttaa
    15061 tattaccttg aataacatat tgtatatgtg ggaaagaaaa gtatgaaaaa aagagaaaag
    15121 aaaaaaatat tggtagttat ggactcgtat ccaccaacat catctccaaa tgatatttgc
    15181 atggacaacg ttatccagga gttaaagata aattatacag tattttgttt agtcaaaaaa
    15241 aaaatgggag ataaaaaata taaagaggtt gatggggtaa atgtaatttc ttattctaaa
    15301 ggaccaatag attcgtttat cagttggggc ttagagcatc agaataaatt attgtcaaaa
    15361 actgcttcaa cggctaaatt tctattgact cgtgtcaatc aattatttac aatacctatt
    15421 tatcctattt tttggccatt ctatcagata cggcttgcat acaaattatt aaaggaatgt
    15481 cgcaaaaata atattcatgc ggtaatagca gtttgctttc ctccagaaag cttatttgca
    15541 ggaaggtttg taaaaaataa aatacgagat ttagtatata taccttattt tattgatgcc
    15601 tattcttgcg ggacatatcc aaaatatatt tcctataaat ttgcattttc aagaaaattg
    15661 ggctatgaaa aatggttaac agataatgcg gatgaagtaa ttatgatgga gtctagtcaa
    15721 agctttcatc aaaaattcag tcttcaacaa attgaacgct acacttttct aaatcccccc
    15781 tttttaaaag aacacgatgt tgaagtagtg gatttccatc ctttattaga agaagggaag
    15841 ataaatatag tatacacagg gtacttgtac ttaccagatc gtgatccctc gtatatcatt
    15901 gatttgattt catcatggaa tcgaaaagat gtagtactca tatttgttgg tggtggaaac
    15961 tgcagtgata taattgaatc aaaaaaaact actttcaacg ggacattaaa acattccaat
    16021 tttttacccc acgatgaaat attaactttg ttagcagggg caaatgttct attaaaccta
    16081 ggggtttcaa attcaaatgc aatttctggg aaaatttttg aatatatgtc ttttggaaaa
    16141 ccaattctaa ccacttattt caaagatgat gatgcgtcac tgatgtattt agataaatat
    16201 cctttgagtt ttacaatcaa tcaaacacaa ttatcattag aggaggcttc tgtggaaagt
    16261 ttagtatttg ttgaaaaaca tctgggtgag caagctgaat ttggaaaaat tgaaaaaata
    16321 ttttacaata gtacaccaga agcagtagtg agaaggatac gggagcattt gctatgaaaa
    16381 taggaatttt atttgatgat gttggaaaag cgggattgga ctattcagcc cctccagaag
    16441 ggaaccctgg tgttggagga acacaatatt gttttctaat gctaatgtat tatctcagca
    16501 atatacaaca agaagatgag attattgtat attgctggaa ccataaggga agtgtatttc
    16561 cgaaaaataa aaatttacat attaagtata tcaatgaacc tgaagaagct atagaattat
    16621 cagttaaaga taccatcgat atttttctat tcaattttag tcatatgtta acatttcaat
    16681 cgttactaga aaaatcgtct ttaagatgca ttacttgggt acataactgg gttagaggaa
    16741 agctacttaa tgccatggtg gaatgttccg cagtcaagag ggttgttttt ctaggtcaag
    16801 aacactatga tagatatatt gatagtccca taatggacaa agctgtagta cttccgaata
    16861 tgtttaatac ggaaggttat attagaagag ataaggattt atcggcagtc gttacatatg
    16921 tgggtgcttt aattccaagt aagggtttcc acgcgcttgc ggctgtatgg aaagacgtta
    16981 tccgtgcttt tcctgaggca aaactatatg tattaggtgc aggaaatctt tatggcacgg
    17041 ttgatggagg aatagagcca gtatttggga agttaggaat tgctgataga gagtacgaag
    17101 aacagttttt aaaatatatt actgataaag atggaaagct attaccttcg attcattttt
    17161 tgggaaatgt tggacgagaa aaaattgata tatataaaaa aacaaaagtt ggtattgtaa
    17221 atccgacagg aaggacggag gtatgtccaa ttagtgcttt ggagatgggg gcggcggaag
    17281 ttccagttat ttctaaaaat ataaacggtt tgccagatgt ggtcataaac ggtcagacgg
    17341 gcttgttggt taacagtaag aagcaactta cacaaagtat tattgaactt cttagtgatg
    17401 atgagaaaaa caagcaacta ggtgaacatg ctagaaatca tgttttttct aattttaacc
    17461 ctgaaaatat tactcaacag tgggttcgag tcttcaaaga tatgttggag gatggagaag
    17521 tcgaagttat ctcaccttca aaaaatatga gaaacaattt taaatgggcg agggtggttt
    17581 tatataatct aaagaaaata cctctgtttc ataatttacc agctatgatt gaaattgaag
    17641 attggatatc aaaaagatta tatggataag aagagattat cactgaatct gattgcaagt
    17701 atattttcat atgcgttatc aatttttttc agtttttact taacccccta tttggttaat
    17761 catttaggaa aagagcttta cggtttttat ggtattgcga acaatcttgt cagctacata
    17821 atggtcatat ctatggcact taattcaatg gctgccaagt atataacagt ggaacttgta
    17881 aagggagaga aagttagagc aaagcaatat tttacatcta tatttatatc taatgttgca
    17941 cttagtctcg tgctggttcc tattctcgtt attttaacga tacatctaca agacttttta
    18001 tctatatcag ttggtcatct cagacaagta caattcttat ttgcttttgt ttttttagca
    18061 atgcttatcc gtttggtttc gtcaatttat ggaactgcta cctatgcagc aaatagaatt
    18121 gatatacgtt cctatatcga aatgggaaaa tctattctta gagtcgcact ttatgtagtt
    18181 attttctcac tactagatgc ttcgatagta catgttggtt ttattttatt ggtattggag
    18241 ctatttaatt ctattataca aatctcccta tcaaaaaaat tgctcccaga gatgactatt
    18301 gattttagct actttgatat taaattggtt ttttctacac taaaggtagg gatttggaat
    18361 tcagttaatc aactcggtga tttactttta tctagctccg gccttgtttt aaccaatata
    18421 tggttagggg aagttgctag tggtaatgtc tccattattc agacaatgcc agcattgata
    18481 agtgggatta ttactgctat aaatggcgtg tttatgccac ggattgcaca taagtatgct
    18541 gtttcgaaaa catccgatct attggacgaa gtgcaaatgt cacagagagt tacaggtgca
    18601 ataataaccc cgattatcat attgttgatg gtatttagtt acgaatttta taatttatgg
    18661 gtcccaggaa atgatattga gttacttcaa aaactatcta taattgatat tgcaaggatg
    18721 atgattattg gggttaactg gccagttctt aatttaacta tagtaacaga taaggtgaaa
    18781 ttcccatcaa ttgttttaat cggcttaggt gtgctgaata ttttgattgt gaatttacta
    18841 atctccttca ctaatttagg agttttcgca attgttttat caacacttat aataacgata
    18901 cttttctatg gtattgcgat tccactatac tctagtttta taataaagca accctggtct
    18961 gctctataca aacctatttg ccaaatgata gttgcgacga cagtcatgtt accggtcact
    19021 ttatatatcc attcactgtt tagtatacat agctggaagg attttattct ttcaggcttc
    19081 atggcggcag tagtttctta tacaatcagt atatgtgtat ttattggtcc gaaattcatt
    19141 tttaaattaa tcccaaagtg ttacaaatag taaggagaaa aaaatgtcat tattttcagg
    19201 aaaaacacta ttaattacag gtggaacagg ttctttcggg aatgctgtgt taaatcgctt
    19261 tttggcgaca gatattgcag aaattcgtgt tttttctcgc gatgagaaaa aacaagatga
    19321 tatgcgccat gaatttcagg ctaagatgcc cgaagttgct cataaaatta gtttctattt
    19381 gggagatgtt cgtgatttgc agtcggttaa aaatgccatg cacgatgtgg actatgtatt
    19441 tcatgcggct gctttgaagc aggtgccgtc ttgtgaattt ttccctattg aagcagtgaa
    19501 gacgaatgtg attggaacag agaatgtatt gacagcggct attgacgcag gtgttgaaag
    19561 tgttatctgt ttatcaacag ataaagctgc ttatccagtt aatgctatgg gaacttctaa
    19621 agctatgatg gaaaaagttg ttgtggctaa gagtcgaacg actacaaaaa cgaaaatctg
    19681 ctgtactcgt tatggcaacg ttatgtgttc acgtggttct gttatccctc tctggattga
    19741 acagattaaa tcaggtcagc cattgacaat cacagatggt agcatgacac gttttatcat
    19801 gagccttgaa gaagctgtag atttggttct ctttgccttt gaaaatggtc aaccaggaga
    19861 tattcttgtt cagaaggctc ctgcttgtac gattcaaaca caagcagagg cagtgtgtga
    19921 gttgtttgga ggagataaag aagcgattcg tgtcattggg gttcgtcatg gagaaaaaat
    19981 gtacgaaacc ttattgacaa acgaagaatg tgctaatgca attgatttgg gtgatttcta
    20041 tcgtgtgcct tgcgacaacc gtaatttgaa ttacgataag tatttcaatc aaggagatgt
    20101 tgaacgtaat ccactgacag aatttaatag caataataca gagttgttat cagtagaaca
    20161 aaccaaggaa aaaattgctt ccttggccta cattcaagaa gaaatggcaa agttaggata
    20221 agtaagaatg acaaaatata cagaagtaaa ttggaaaaac aatggcaaac tgaaactttt
    20281 gattattgtt ggaactcgcc cagaaatcat tcgcttgtca gaggttatta agaaaacccg
    20341 tcgttatttt gatgtggttc tagctcatac tggtcaaaac tatgattata acttaaatgg
    20401 catcttcttc cacgatttaa atttggagga gccagaggtc tatctaaatg ctgtaggtag
    20461 tgatttgggt gagaccatgg ggaatatcat tgcagaaagc tataaactga tggttgcgat
    20521 tcaaccagat gcagttcttg ttttgggtga taccaattct tgtctttctg ttattggtgc
    20581 taaacgcttg cacattccta ttttccacat ggaagccgga aatagaagta aggatgaatg
    20641 tctaccggaa gagaccaatc gccgtattgt cgatattatt tctgatgtca atatggctta
    20701 ctccgagcac gcccgtcgtt atctagctga taatggccta cctaaggaga gaacctatgt
    20761 gacgggttcg ccgatggctg aggttttaag agtgaattta gaaaaaattg agtcatcgga
    20821 tatccaccag cgtttgggtc ttgaaaaagg gcgctatatt ctgttgtctg cgcaccgtga
    20881 agaaaatatt gataccgaca agaacttcat cagtttgttc actgctgtaa ataagatggc
    20941 tgagaaatac gatatgccaa ttctgtattc ttgccatcca cgcagtaaaa acaagttgga
    21001 atcatcaggt tttgttttgg ataaacgtgt tatccagcat gagccgctag gcttccatga
    21061 ctataattgt ttacagatga atgcttatgc tgtcgtttct gattcaggaa ctctaccaga
    21121 agaatcgagt ttcttcactt cagttgacaa gcctttccca gcagtttgta ttcggaccag
    21181 tacggagcgg ccagaggcct tagataaggc agatttcatt ctttctggaa ttgatgaaat
    21241 tggtctcctg caggcggttg atgtggctgt agctatgaat gagcacaaac atttaggctt
    21301 gccagtacct gattatgtgg atgaaaatgt atcagataag gttgtaaaaa ttattcaatc
    21361 ctatactaac atcgtcaata agatggtttg gcgtaaatac taaggagact tcctatgaaa
    21421 attttagtaa caggcgcaaa gggaatggtt ggaacggcat tggtaaatca cttgaagacg
    21481 attcaaagtg ggaaaaacag aacgaggccc aatatccata tccagtccat ttttgaatat
    21541 gatatagatt ctacgattga ggaattagag cagtattgcc aagaggcgga ctttgttttt
    21601 aatcttgcgg gtgtaaatcg tcccgagaat attgaggaat ttatgcaggg taattttggc
    21661 ttcgccagtc agctattgga acagctcaaa aagtacaata gtaaggctcc tattatgcta
    21721 tcttcttcta ttcaggcaac cttaattgga cgctatggtg atggggaata cggaaaaagc
    21781 aagctggcag gggaggaatt gttctttcaa tatggtcagg aacagggagt aaaggtagca
    21841 gtttaccgtt ttccgaattt gatggggcat tccagaccca attacaattc ggctgtatca
    21901 acattttgtt gggcgattgc caatgatcaa tcttattcag tttcagatcc taaggcggaa
    21961 gttgaactgc tctacattga tgatttagta gatggtatgt tggatttgtt ggagggcaag
    22021 gaagtttatt gtaactatga ggggctaact ccagttgagg atattagtgg caaatatgct
    22081 tggattccaa ccactcatcg tgtcaccttg ggagaaatta ttgctctctt ggaatctttc
    22141 aagcaacaac cattgacctt gatgatgccc aagattccag ccaactcctt tgcgaagaaa
    22201 ttattttcac tctatttgac ttacttgccg acagaaaagt tcaaatatgg tctaaaaatg
    22261 aatgtggatg atagaggttc tttcacggag ttgttacaca cagctgattg tggtcaggtt
    22321 agtatcaata ttagcaagcc aggtattacc aagggtcaac attggcacag tagcaagtgg
    22381 gagcaattca tagtagttag tggcagaggt ctcattcagc agagaaatat tgtcacgggt
    22441 gaatttgtgg aatttgaagt gtctggagat accattgaag ctatctatat gattcctggt
    22501 tggactcata atattattaa tctttcggat acagaaaatt tagtcacggt catgacctgt
    22561 aatgagattt ttgatccgaa tcgaccggat accttttttg aagaagtttg ataaagtgac
    22621 agttttcttg aatatatggt aaaattctcc taattatgga acataactac gattaataat
    22681 ttctatgtgg tttttggaat agttcttttc caactcttta tcaagaatga tatgttttgg
    22741 tagtccgaaa tgttttcaga ataagtattg aagagtcagc tagaatgtga gggttaattg
    22801 tattttttga agttttacta taattacaat tgttattttt aatggattca ttttatatct
    22861 tagataggca agggttgtgg agatatttta agagtagtac tgataaatgg ttaataatag
    22921 ttgcatattt cgtaacagcc caataacaag gtatctatct actccctccc tcctccagta
    22981 tactgttaga gcccgtccca ttgactgttc cccaatattg ccactttgag aagaaaggca
    23041 ggaatgatat tctgatgaaa attcgtctcg gaaaagtgga agtcacattc tttcactcta
    23101 tcaaccaaga gacgtttcaa cagttacaaa ctctccgttg acagcagaag ctaactgctc
    23161 actcaaaaaa gtttgttctt cttcaactgt catataagcg tggcgacgac ctcctctagc
    23221 atctgaagta agacatgtta aa
//
LOCUS       DASFQS010000027        23080 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.027, whole genome shotgun sequence.
ACCESSION   DASFQS010000027 DASFQS010000000
VERSION     DASFQS010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23080
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.027"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            238..477
                     /locus_tag="U1041_000896"
     CDS             238..477
                     /locus_tag="U1041_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4768017.1"
                     /translation="MVPELIGEVLAVMMQLAKEGMTMVVVTHEMGFARAVADRVIFMG
                     GGQIIEEGRPEDIFDRPQEERTKQFLARIQKVDVE"
     gene            842..1783
                     /locus_tag="U1041_000897"
     CDS             842..1783
                     /locus_tag="U1041_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4768018.1"
                     /translation="MTTLADVARLANVSKMTVSRVINHPEQVTQELRTLVTAAMEELN
                     YKPNVAAKALAQQRTLIVQAVILEKMDVVEPYYIDLLAGIADELNHRNYTLQLVTNPS
                     QITDQCDGYIVTGARKDDYPWLKGLRKPLILFGENQEGLPFVDSDNHLATRSATQFAL
                     SKGYERIVFVGIDLPEAFEKGREEGYKDAMQGRETHLYRLENRSRVAEEFVKNLDYLP
                     ENTCFICASDRLALGVTRGLQALGKSIPNDVGVIGFDGFFLDRMSRPALTTMKQPIRQ
                     MGALSVKHLMTILDGKPLARQGHYCQATLIERETTPQ"
     gene            2069..8389
                     /locus_tag="U1041_000898"
     CDS             2069..8389
                     /locus_tag="U1041_000898"
                     /EC_number="3.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pullulanase"
                     /protein_id="HEM4768019.1"
                     /translation="MKKKSVQNMKRTGMLEMKQIFGIRKLNVGVASVGIAAALFLSGA
                     GQLVQAEEVVLPASTSSTILSEQDGGAVEATDSIVAEATAVTETADATAPEEAPIEEG
                     SIRLHFENVDETAPESQGLWTWGGVAEPSDGNQWPTDTANFSSSQVDDYGHYVDIKKS
                     ETPGTIGYLVLKNGEKITESDQKVELLVPEQNEAWIASDYSVSSYEPLKDENVLRINY
                     TREDNNYEGWGVWTWGDITEASSDWPTGAVDFKVGKYGAYVDIPLSNGLDSKLGFLLI
                     NQDNPDLAGNKTIDLAFADRKRHSQIFLRNDDDKVYTNPYFIEEKVELDTSKATPGTK
                     NVTIEASIKAPFNYNESGLVSVTVTNPENAEIVKMEVDTSAIGGGLVPISTELNRVTI
                     KATSSTAPGTYILPVKVYDKDNGYYETKLDVTITERIKADGEKDWDEQVIYFMMTDRF
                     YNGDTSNDKLVEGTASNPRGLYQGGDFKGVTAKLDYLKELGVDSIWLTPIVENIPQNV
                     GSATDGEYYAYHGYWASNFEKLNPHLGSLADFHELIDAAAEKGINIVVDVVLNHAGYG
                     TEETFVGMVRTKEEDIQGDDQLGSLSNLPDFKTEEAAVRNQLVAWQASWLERSTTAKG
                     NSIYGFRVDTVKHVDDTTWQHFKNELVDRDPDFHLIGETWGANYKDTKGDLGIGTMDS
                     LLDFGFKDIAKYLVNGQLKAAGKELEERSKVLTSAASLGQFLGSHDEDGFLYSLGGAE
                     KEGNLDKLKLAASLLITAKGQPVIYYGEEVGQSGQNNWPVYDNRYDFDWSKVETSDIT
                     DHYQKLLAFRNANSTLLSRGDTSTLAGNDSQGWLISKRSYQEQAAYLVFSTNTESKEM
                     ALEVSGQDVVVTDAYTGKSYQAIEKDGKWVVQVELPTIGQGGTMLLQTEAGDIVNASV
                     QGATEEPIEAGYFRVHFKTLPSDNLSSLGLWTWDDVEKPSSDLGAWPTGATNFSTAKQ
                     DDYGYYLDIKMKDETASKISLLINNTSGDNITGDKTIERISTTMNEAWFDENYQLSLY
                     QPLKEGYIRINYFRIDGNYDKKGLWIWGDVTDLTLGDWPNGIDFENQGKYGAYIDVKL
                     TDLPSSIGFLLLDESKSGDDVKIQQKDYSFKDLKNQTQIFLKDDDATIYTNPYFVNNV
                     RVTGVSHVSLTALEAAFTTLEGADKDSILEKLSVTDKNGQPVAVTDLVLDLTSNKVRV
                     LGDFNQENAGYTLKYGNDNFTTTMSWQLKDELYAYDGELGARVSQAGSVVDMTLWSPS
                     ADSVAVVLYDKDDQSKVVGKLAMTKGDKGQWDLELNSQSGLGIADYRGYYYHYEITRG
                     DQSVLVLDPYAKSLAEWNSDLADTDPSYQIAKAAIVDPAEVGPSDLNYATIPNFNQRE
                     DAIIYEAHVRDFTSDPAISDELTAQFGTFAAFAERLSYLKDLGVTHIQLLPVMSYYYV
                     NELKNAERMSEYASSNSNYNWGYDPQSYFAFTGMYSTDPTDPMKRIEEFKNLVNEIHK
                     QGMGVILDVVYNHTSKTFLFEDLEPNYYHFMEADGTAKSSFGGGRLGTTHYMSRRVLV
                     DSIKYLVDEFKVDGFRFDMMGDHDAEAIELAFTEAQKLNPNIIMLGEGWRTFTGDANQ
                     PVQPADQDWMSSTDTVAVFSDEIRNTLKSGYPNEGQPAFITGGAKSVESVFNNIKAQP
                     GNFLADDPGDVIQYIAAHDNLTLFDIIAQSIKKDPSIAENYTEIHQRQRLGNLLVLTA
                     QGTPFIHSGQEYGRTKQFRHPDYKEPVSEDKVPNKAHLLTNADGTPFDYPYYIHDSYD
                     SSDAVNKFDWTKATDEALYPENTRTQAFTKGLIALRKSTDAFRLGTKEEVEQKVSLIS
                     IPGQNGIATNDVVIAYQTIASNGDRYAVFVNADSKERSFVLSDSYKELLKGQVLVDGE
                     RAGVEALSDLVGVELTDSAVVLAPLTATVIRLPYIITEVPDTAPTAEEKPTLDFTRKE
                     RTEESVLPIAEQVRYDATLAKGQSYVLQEGKPGKRVLVYQDVLVDGKVIATNLLSETV
                     VDGEARILVRGSKEVIKEVAKSDAVVKQEVLKPSLSTPTTQVSEQTTSASNKESLPAT
                     GDRQSDLVLLGLGLAGLGLTVAAQGRTKKSEE"
     gene            8620..10068
                     /locus_tag="U1041_000899"
     CDS             8620..10068
                     /locus_tag="U1041_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006153412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HEM4768020.1"
                     /translation="MDFLQTPLNWFSQNILQNPAFFVGLLVLVGYALLKKKPHDVFAG
                     FIKATVGYMILNVAAGGLVTTFRPILAALNYKFQIDAAVIDPYFGLAAANGKIAEEFP
                     DFVSAATTALLIGFGVNILLVALRKVTKVRTLFITGHIMVQQAATVSLMVLFLIPALR
                     NQFGTAAIGIICGIYWAVSSNMTVEPTQRLTGGGGFAIGHQQQFAIWFVDKIAPKLGK
                     KEENLDNLKLPSFLNIFHDTVVASATLMLVFFGVILFILGPEIMANPEVITSGTPYNP
                     TKQAFFMYVVQTAFTFSVYLFILMQGVRMFVAELTNAFQGISSKLLPGSFPAVDVAAS
                     YGFGSSNAVLSGFAFGLIGQLITIVLLIVFKSPILIITGFVPVFFDNAAIAVYADKRG
                     GWKAAAILSFLSGVLQVALGAVCVGLLELSGGYHGNIDFEIPWLPFGYAFKYLGVAGY
                     VLVCLFLLAIPQLQFAKAKDKEAYYRGEAQAD"
     gene            10288..10566
                     /locus_tag="U1041_000900"
     CDS             10288..10566
                     /locus_tag="U1041_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000241478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM4768021.1"
                     /translation="MVKVLTACGNGMGSSMVIKMKVENALRQLGVTDFQSASCSVGEA
                     KGLAAGYDIVVASNHLISELEGRTKGHLVGLDNLMDDNEIKTKLQAVL"
     gene            10629..11114
                     /locus_tag="U1041_000901"
     CDS             10629..11114
                     /locus_tag="U1041_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4768022.1"
                     /translation="MNLQKSFTENNSIRLGLTAETWQEAVHLAVEPLIESGTATEEYY
                     DAIIASTEEYGPYYVLMPGMAMPHAQAGVGVLKDSFALITLTKPVAFSDGKEVSVLLT
                     LAATDPKIHTSVAIPQIIALFELENSIERLIACKTPEEVLAMVEESKNSPYLEGLDLE
                     S"
     gene            11125..11787
                     /locus_tag="U1041_000902"
     CDS             11125..11787
                     /locus_tag="U1041_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014622185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HEM4768023.1"
                     /translation="MKHIPNLQVALDHSDLQGAIKAAVSVGHEVDVIEAGTVCLLQVG
                     SELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMEAALKA
                     IKEVRGDKGEIQIELYGDWTYEQAQLWLDAGISQAIYHQSRDALLAGETWGEKDLNKV
                     KKLVDMGFRVSVTGGLDVDTLKLFEGVDVFTFIAGRGITEAADPAAAAREFKDEIRRI
                     WG"
     gene            11793..12656
                     /locus_tag="U1041_000903"
     CDS             11793..12656
                     /locus_tag="U1041_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HEM4768024.1"
                     /translation="MARPIGIYEKATPKHFTWKERLEFAKELGFDFVEMSVDESDARL
                     ARLEWTKEERLDLVKAIYETGVRIPTICFSGHRRYPLGSNDPALEAKSLEIMKQCIEL
                     AQDLGVRVIQLAGYDVYYEEKSPETRERFIKNLRKACDWAEQAQVMLAIEIMDDPFIN
                     SIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDIYSEFYLGHRSIAALHLKDTYAVTEN
                     SKGQFRDVPFGQGCVDWDNMFAVLKKTNYQGPFLIEMWSENCETVEETRAAIKEAQDF
                     LYPLIEKAGLN"
     gene            12656..13372
                     /locus_tag="U1041_000904"
     CDS             12656..13372
                     /locus_tag="U1041_000904"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001934215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HEM4768025.1"
                     /translation="MPKDLQEMRQRVYEANIALPAHGLVKFTWGNVSEVCRELGRIVI
                     KPSGVDYEKLSPENMVVTDLDGNVVEGDLNPSSDLATHVALYKAWPNIHAVVHTHSTE
                     AVGWAQAGRDIPFYGTTHADYFYGPVPCARSLTAEEVNTAYEKETGSVIIEEFERRGI
                     DPVAVPGIVVRNHGPFTWGKDPAQAVYHSVVLEEVARMNRYTEQINPRVEPAPSYIMD
                     KHYLRKHGPNAYYGQKGDEH"
     gene            13455..14072
                     /locus_tag="U1041_000905"
     CDS             13455..14072
                     /locus_tag="U1041_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017772020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768026.1"
                     /translation="MRKFLQDSLTEVAYYLELILSAILGLALLALSGLLLADLVGSLT
                     GGIQADNFIQSFLSKAMTLAVGVEFIKMLCKQSPSTVIEVLLVAIARQLIVEHGSSMD
                     YLIGIASVAILFAVRKYLFTQFDDSNNIIMRASQKVKVANIIARVKIPSEGTETLREF
                     VTRKLNEEEKTIAIGACVYLKNVALRIDNMHGDLITRVEIIKSIY"
     gene            14157..15845
                     /locus_tag="U1041_000906"
     CDS             14157..15845
                     /locus_tag="U1041_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HEM4768027.1"
                     /translation="MLLDKSSCALLRHLIGIQEPETIMAISKGLQQSRRKIYYHLEKI
                     NAAFPDHVEPIESLPRIGIRLSAEQKQACRQLLDSIDSYSYIMNMDERMQLMLLYICI
                     AHERITLEKLMDLTEVSRNTVLNDLNEIRSRLSKEQYQMTLYVSKSQGYDLACHPLTK
                     IQYIHSLLYSLFTEASKSFVSILEDKVSLFSGCQSLFSKDLAQFLSQQVYGIEKDLGK
                     KINRSEIELMLKILPYMLLTYRNMSLEQEEKDAIVREFALVYERIEYGVAQKISQSLE
                     EQFGLDLDEIEVSLIAVLLLSYRKDRDAHVTSQDFADLKKIVDVFIRHFELHSDFELE
                     KKEELAHDLLAHCKAMLFRKTYGILSRNPLVDQIRYKYDTLFRLTKSSSHILEEAWQI
                     QLTDEDIAYLTVHLGGALRRSSSRKLTSPTVFLICDEGVSVQKLLMKQCQHHLPEKTI
                     SAVFTTEQFKSVEDLLEVDFLISTNEVTDTDLPVIQVHPILDFDDVLRLIHFAKYRNL
                     TDSQKGFAIELDKLLASYVENGQEALELKQRLQNLIANELLASLASSDLETDLY"
     gene            15970..17061
                     /gene="ulaG"
                     /locus_tag="U1041_000907"
     CDS             15970..17061
                     /gene="ulaG"
                     /locus_tag="U1041_000907"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HEM4768028.1"
                     /translation="MAKVQDITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     NCGVWIKTPGGANVVMDLWSSRGKSTKKVKDMVWGHQMANMAGVRKLQPNLRVQPMVI
                     DPFAINELDYYLVSHVHSDHMDISTAAAIINNPKLDHVEFVGPVESGDIWEKWGVPAD
                     RIIRIAPGDSFEFKDIKVHAVESFDRTCLVTLPIEGYEENGGKLAGLPVTDELMARKA
                     VNYVFETPGGTIYHGADSHFSNYFAKHGRDFNIDVAINNYGDNPIGIQDKMTSIDLLR
                     MAENLRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPL
                     DKDRIEYHHPRGFDDCFLEDSNIQFKALL"
     gene            17162..19132
                     /gene="tkt"
                     /locus_tag="U1041_000908"
     CDS             17162..19132
                     /gene="tkt"
                     /locus_tag="U1041_000908"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM4768029.1"
                     /translation="MSQLSVNAIRFLGIDAIEKSKSGHPGVVMGAAPMAYSLFTKELR
                     INPAQPNWINRDRFILSAGHGSMLLYGLLHLSGFEEVTMDEIKNFRQWGSKTPGHPEF
                     GHTAGVDATTGPLGQGISTATGFAQAERFLAAKYNRDGFPIFDHYTYVICGDGDLMEG
                     VSAEAASYAGLQKLEKLIVLYDSNDINLDGETKDSFTEDVRARYNAYGWHTDIVTDGT
                     DVDAIFAAIEKAKVAGKPSLIEIKTVIGHGSPNKQGTNAVHGAPLGAEEAEATRKALD
                     WNYAPFEIPAEVYADFKANVADRGAAAYDAWVKLVEDYKVAHPELAAEVTAILEGRDV
                     VEVKPEDFPVYENGFSQATRNSSQDALNAAAKVLPTFLGGSADLAHSNMTYIKEDGLQ
                     DAANPLNRNIQFGVREFAMGTILNGMAAHGGLRVYGGTFFVFSDYVKAAVRLSALQGL
                     PVTYVFTHDSIAVGEDGPTHEPIEHLAGLRAMPNLNVFRPADARETQAAWYLSLTSKS
                     TPSALVLTRQNLTVEEGTDFDKVAKGAYVVYEVEGFDTIILASGSEVNLAVKAAKELE
                     TAGTKVRVVSVPSTELFDAQDVAYKEEILPNAIRRRLAIEMGATQSWYKYVGLDGKVL
                     GIDTFGASAPAQTVIDNYGFTVENVVKLVGEL"
     gene            19412..19933
                     /gene="tadA"
                     /locus_tag="U1041_000909"
     CDS             19412..19933
                     /gene="tadA"
                     /locus_tag="U1041_000909"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HEM4768030.1"
                     /translation="MNYTHEEKEYFMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRG
                     HNAREELNQAIMHAEVMAIQEANNVEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQV
                     IYGATNKKFGAAGSLYDILTDERLNHRVAVETGILEEDCAQIMQDFFRQRREKQKAEK
                     EALKAQQGTISDS"
     gene            19976..20065
                     /gene="ffs"
                     /locus_tag="U1041_000910"
     ncRNA           19976..20065
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="U1041_000910"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            20283..20825
                     /locus_tag="U1041_000911"
     CDS             20283..20825
                     /locus_tag="U1041_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768031.1"
                     /translation="MFVFAFPGMGKTTLAKQSSEIVDLEMSDIKYDNSSVRHLNKEER
                     KSTPRPIKDKNYKNIYVDKAYALHEEGKTVLVAMNFLVRMLLVMLVHGAVPFHIYIPH
                     PSLKEEYRQRYIQRGNNSKFIFEVMTIWYVSLVPLYLLSKIVPNMITVTQSGQVLADY
                     KTPHYDTMFVKNKQVTQTIS"
     gene            20907..22256
                     /locus_tag="U1041_000912"
     CDS             20907..22256
                     /locus_tag="U1041_000912"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEM4768032.1"
                     /translation="MTHITFDYSKVLGQFVGAQEVEYMQPQVTLADQMLRQGTGPGSD
                     FIGWLDLPENYDKEEFARIKEAAAKIQNESEVLVVIGIGGSYLGAKAAIDFLSNSFVN
                     LQTREERKAPQILYAGNSISSSYLADLVDYVADKDFSVNVISKSGTTTEPAIAFRVFK
                     ELLVKKYGQEEANKRIYATTDKAKGAVKVEADANGWETFVVPDDVGGRFSVLTAVGLL
                     PIAAAGADIDALMEGANAARTTYTSDKIAENEAYQYAAVRNILYRKGYVTEILANYEP
                     SLQYFSEWWKQLAGESEGKDQKGINPTSANFSTDLHSLGQFIQEGNRNIFETVVRVDK
                     PRKNILIPEMAEDLDGLGYLQGKDVDFVNKKATDGVLLAHTDGGVPNMFVTLPQQDEF
                     TLGYTFYFFELAIAISGYLNAINPFDQPGVEAYKKNMFALLGKPGFEELGAELNARL"
     gene            22322..23062
                     /locus_tag="U1041_000913"
     CDS             22322..23062
                     /locus_tag="U1041_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEM4768033.1"
                     /translation="MKKEFFVVGDVHGKFELLLDMLKKWNEERQQLIFLGDLIDRGEN
                     SKACLELVRQLVREKGAICLTGNHERMFLAWLRNPIDRYDHYRRNGGDTTINSLLERP
                     LDAPVDGLVDANAVMEQYGDLIDFVKSCPYHLETEGYIFVHAGVDLTLPDWRKTSNHD
                     KVWLRTPFHEAENTTGKMIVFGHTPVYNLYQTKLRISQIWTSPDGKMGIDGGAVYGGV
                     LHGIVLDATGLVQDYIVGAVNPRKEIED"
BASE COUNT         6742 a         4627 c         5385 g         6326 t
ORIGIN      
        1 gagatataaa gaccgagtag gtctcagatt gaagaaaaag tccattttgg acaattttct
       61 tcaatctttt ttctgtatgt tgaaaataaa aaaactctca gaaatacaaa aatataaatg
      121 tttctaagag tttaatgact tgctatcttt cgcaaacttc ttcaattttt tatattgtta
      181 ggagtttgtc tacgttctga gaccgagatc atctattttg atgagccaac ctcggccttg
      241 gttcctgagt taatcggtga ggtcttggct gtcatgatgc agttggcaaa agaaggtatg
      301 accatggtgg ttgtgacgca cgagatgggt ttcgcgcgtg cagtggcaga ccgagtgatt
      361 tttatgggtg gcggccagat tattgaagaa ggccgaccag aagacatttt tgaccgtcca
      421 caagaagaac gtactaagca attcttagct cgcattcaaa aggtagatgt tgagtaagct
      481 aagcaagtaa tttatcttat tcatttccat aatcgtacag aaaatggaca gaatttgaca
      541 aagatacttc aattgttaga cattgattgg tctagcagtt ggagtatttt ttgtttagag
      601 ggaatggata ttcttagata gtacttttag cacgaggcga tgagccgcag gcatagatga
      661 agttaggcaa ggtgaactaa ggaagtaata ggaggaaaac taaatgacga taaatgtatt
      721 cgaaaggtct ttacttttta gtaataaata gtatataata acctaaagaa aacgtttgca
      781 caattttgac tgtttgcttg ctaaaagata agcaacagaa atagaattag ggaggagttc
      841 tatgacgaca ttagccgatg tggctaggtt agccaatgta tcaaagatga ctgtttcgcg
      901 tgtcatcaac catccagaac aagttacaca agagctgcgg acgctcgtaa cagctgcgat
      961 ggaagaatta aactataagc caaatgtggc ggccaaggcc ttggcccagc aacggacact
     1021 gattgttcag gctgtcattc tcgaaaagat ggatgtggta gagccgtact atatcgacct
     1081 tcttgcagga atcgctgatg agcttaatca tcgaaattat accttgcagt tggtgaccaa
     1141 tccaagtcag attactgatc aatgtgatgg ttacattgtg actggtgctc gaaaggatga
     1201 ctacccctgg ctgaaagggt tgcggaagcc attgatttta tttggggaga atcaagaagg
     1261 ccttcctttt gtagattcag acaatcattt ggcgactagg tccgcaaccc agtttgcttt
     1321 atcaaaaggt tatgagagga ttgtttttgt agggattgac ttgcccgaag cctttgaaaa
     1381 agggagagaa gaaggctaca aagatgcgat gcagggccga gaaactcatc tctatcgatt
     1441 ggaaaatcgt tctcgtgttg cggaagaatt tgtgaaaaat cttgattatt taccagaaaa
     1501 cacctgcttt atctgcgcat cggatcgtct cgctcttggg gttacaagag gtttacaagc
     1561 tctaggaaag tctattccga atgacgttgg ggtgattggt tttgacggct tctttttaga
     1621 tcggatgtcc aggccagcct tgacgacgat gaagcagccg attcgtcaaa tgggggctct
     1681 tagcgtcaaa catttaatga cgatattgga tggcaagcct ctggctagac aggggcatta
     1741 ctgtcaggcg acgttaattg aaagggagac tacacctcag tagtctcttt tttaatcggc
     1801 agaccgtgta ggagcaaaag aggagggggc tgtttattct atttttgtta gatagtagat
     1861 taaaacttgt taccgctaac attcaagaaa acgtttgcaa aaactccttg gaattgtata
     1921 tactggtagt gtacaattca aacttattta tactcttcga aaatcaaaat cagacgttgt
     1981 tgacttgatt tgatgaactt cagttctatc tgcatctgcg tcgcctagtc tgtttttgat
     2041 tttcattgag tattatatgg aggagtctat gaaaaagaaa tccgttcaga atatgaaacg
     2101 aacagggatg ctagagatga aacagatttt tggcattcgt aaactaaatg taggtgtagc
     2161 ctctgttggg attgcggctg ctctgttttt aagtggggca ggtcaactag tgcaggcaga
     2221 ggaagttgtc ctccctgcgt caactagttc aacgattctt tcggaacagg atggcggcgc
     2281 ggtagaagct acagattcta tagtagctga agcgacagcg gtaacagaaa cagccgatgc
     2341 aactgctcca gaggaagctc ctatcgaaga aggcagcatt cgtctgcact ttgaaaatgt
     2401 agatgaaaca gcgccagaga gccaaggact gtggacttgg ggaggagtgg cagagccgtc
     2461 cgatggtaat caatggccaa cggatacagc gaatttttca agcagtcagg tagatgacta
     2521 cggccattac gttgatatta aaaaatctga gacaccagga acgattggct atctggttct
     2581 caagaatggg gaaaaaataa cagaatcgga ccaaaaagtg gagcttcttg ttccggaaca
     2641 aaatgaggct tggattgcta gtgattatag cgtgtctagt tatgagccgc tcaaagatga
     2701 aaatgtcctc cgtatcaact acactcgtga agacaataat tatgaaggtt ggggcgtttg
     2761 gacttggggc gatataactg aagcaagtag cgactggcca acaggtgccg ttgattttaa
     2821 agttgggaaa tacggtgctt atgttgacat tcctctttca aatggtttag attccaagct
     2881 tggatttctg ctaatcaatc aggataatcc agatttggca ggcaataaaa ccattgattt
     2941 agcctttgca gatcgtaaac ggcatagcca aattttcctt cgcaatgacg acgacaaagt
     3001 ctataccaat ccatatttta ttgaagagaa agtagaactt gatacaagta aagctactcc
     3061 gggaacaaaa aatgtaacca ttgaagcaag tataaaagca ccattcaact acaatgaaag
     3121 tggcttggta tctgtaactg tcaccaaccc tgaaaatgct gagattgtca aaatggaagt
     3181 tgatacaagt gccatcggtg gaggccttgt gccaatctct actgagctca atcgtgtgac
     3241 tattaaagcg acgtctagca cagcgccagg gacatatatt cttcctgtaa aggtctatga
     3301 caaggacaac ggttactacg aaacaaaatt ggatgtgacc attacagagc gtatcaaggc
     3361 agatggtgaa aaagactggg acgagcaagt catctacttc atgatgacag accgtttcta
     3421 caatggagac accagcaatg acaagctagt ggaaggaaca gcctccaacc cacgcggtct
     3481 ttaccagggc ggtgacttca aaggagtgac agccaagctg gactacttga aagaactggg
     3541 tgtggactct atctggttga ctccgattgt ggaaaatatt ccacagaatg ttggtagtgc
     3601 aacagatgga gagtactatg cttaccatgg ttattgggca tccaattttg agaaactaaa
     3661 tccgcatttg ggaagtttag ctgatttcca cgaattgatt gatgctgcgg cggaaaaagg
     3721 tataaacatt gttgttgacg tggtgcttaa ccatgctggc tatggtacag aagaaacctt
     3781 tgtaggcatg gtacggacca aggaagaaga tatacaaggg gatgaccaat taggttccct
     3841 atccaattta ccagacttca agacagaaga agctgcggtt cgtaatcaat tggttgcttg
     3901 gcaggcatct tggttggaac gctcaacaac tgctaaaggt aactcaatct atggtttccg
     3961 tgttgatacc gtcaaacacg ttgatgatac cacatggcaa catttcaaaa atgaattggt
     4021 ggatagagat cctgacttcc acttgattgg ggaaacttgg ggagctaact ataaagatac
     4081 caagggtgat ctgggtatcg gtactatgga cagtctgttg gactttggct tcaaggatat
     4141 tgccaaatat ctggtcaatg gtcaactaaa agcagctggg aaagagctgg aagaacgtag
     4201 caaggttctg actagtgcag cttctctggg tcaattcttg ggtagtcacg acgaagatgg
     4261 tttcctctac agtctcggtg gcgcagaaaa agaaggaaat ctggacaaac tgaaattggc
     4321 tgctagtctt ttgattacag ctaaaggtca gccagtcatc tactacggtg aagaagtggg
     4381 gcaatctggg caaaacaact ggccagttta tgacaaccgg tacgatttcg attggagcaa
     4441 ggtagagact agcgacatca cagaccatta ccaaaaatta ttggctttcc gcaatgccaa
     4501 ttcaacattg ctctcacgtg gtgatacaag cacccttgct ggaaatgata gccaaggttg
     4561 gttgatcagc aaacgcagtt accaagaaca agctgcctat cttgtcttct caaccaatac
     4621 cgagagcaag gaaatggcgc ttgaagtatc tggtcaggat gtagttgtca cagatgccta
     4681 tacaggaaaa tcttatcaag ctatcgagaa agatggtaaa tgggttgttc aagttgaact
     4741 gccaactatc ggtcaaggtg gcaccatgct ccttcagaca gaagcaggtg acatcgtcaa
     4801 cgcaagtgtg caaggagcga ctgaagagcc aattgaagca ggctacttcc gtgttcactt
     4861 taaaactcta ccatctgaca atctatctag cctaggttta tggacatggg atgatgtgga
     4921 aaaaccatcg tcagatcttg gtgcttggcc aacaggtgca accaatttca gtaccgctaa
     4981 acaggatgac tatggctatt atctagacat caagatgaaa gatgaaacag ccagcaagat
     5041 tagtctgttg atcaataaca cttctggtga taacatcaca ggtgacaaga ccattgaacg
     5101 gattagcacc acgatgaatg aagcttggtt tgatgagaat tatcaactca gcctctatca
     5161 accgcttaaa gaaggctaca tccgtatcaa ttacttccgt atcgatggca attatgataa
     5221 aaaaggtctc tggatttggg gtgatgtgac tgaccttacc ttgggtgact ggccaaatgg
     5281 tattgatttt gaaaaccaag gcaagtacgg tgcctatatt gatgtcaaat tgacagattt
     5341 accaagttcc attggcttct tgctattgga tgaaagcaag tcaggagacg atgtgaagat
     5401 tcagcagaaa gattatagct ttaaagattt gaaaaatcag acacaaatct tcctcaaaga
     5461 tgatgatgcg actatttaca ccaaccctta ttttgtcaat aatgtccgtg tgacaggcgt
     5521 ttctcacgtt agcctaacag ctttagaagc agcctttaca acgctggaag gtgctgataa
     5581 ggatagcatc ttggagaaat tgtctgtaac agataagaat ggtcagccag ttgcagtgac
     5641 ggaccttgtc ttggacctta ccagcaacaa ggtgcgagtc ctcggggatt tcaaccaaga
     5701 aaatgcgggc tataccctca aatatggcaa tgataacttc acaacaacta tgagttggca
     5761 gttgaaggat gagctctatg cttacgatgg ggagcttggt gcgcgtgtga gtcaggctgg
     5821 tagtgtcgtt gatatgactc tctggtctcc aagtgcagac agtgtagcag ttgttcttta
     5881 cgataaagat gaccaatcta aggtggtcgg taaattagcc atgaccaagg gcgataaagg
     5941 acaatgggac ctcgaattga acagtcaatc aggtcttggt atcgctgact atcgtggtta
     6001 ctactaccat tatgaaatca ctcgtgggga tcaatctgtt cttgttttag acccatatgc
     6061 taaatcttta gcggagtgga atagtgattt ggctgataca gatccatctt atcagattgc
     6121 caaagctgcg attgtggacc cagcagaagt tggtccaagt gatttgaact atgccacaat
     6181 tcctaacttc aatcagcgtg aggatgccat tatctatgaa gcacatgtcc gtgacttcac
     6241 atccgatcct gctatttctg atgaattgac agctcagttc ggtacctttg cagcctttgc
     6301 tgagcgtctc agctacctca aagacctggg tgtgacccat attcagttgc taccagttat
     6361 gagctactat tatgtcaatg aattgaaaaa tgcagagcgg atgagcgagt acgcatcaag
     6421 caacagtaac tacaactggg gttatgatcc acagagctac tttgccttta caggtatgta
     6481 ttctacagat ccgaccgatc caatgaaacg catcgaggaa ttcaaaaatc tggtcaatga
     6541 aattcacaaa caaggcatgg gtgtgatttt ggatgtggtg tataaccaca cgtctaagac
     6601 tttcttattt gaagatttag agccaaacta ttatcacttc atggaggcag atggtacggc
     6661 taaatcaagc tttggtggtg gtcgtctcgg aaccactcac tatatgagtc gccgtgtcct
     6721 cgttgattct atcaagtatc ttgtggacga gtttaaggta gatggtttcc gcttcgatat
     6781 gatgggggac catgatgccg aagcgattga gctggccttt accgaggctc aaaaactcaa
     6841 tccaaatatc attatgcttg gtgaaggatg gagaaccttt acaggtgatg ccaatcagcc
     6901 tgttcagcca gcggaccaag actggatgag ttcaacagat acggttgcgg tattctcaga
     6961 tgagattcgc aacacactta aatctggtta tccaaacgaa ggtcagccag cctttatcac
     7021 aggcggtgct aagagtgttg agtctgtctt caataacatc aaggcacaac caggcaactt
     7081 cttggcagat gatccgggtg atgtgatcca atatattgct gcacatgata acttgaccct
     7141 ctttgatatt atcgctcagt ccatcaagaa ggatccatca atcgctgaaa attacactga
     7201 aattcaccaa cgtcaacgtt tgggtaattt gctagtcttg actgctcaag ggacaccgtt
     7261 tatccattct ggtcaggagt atggacggac caaacagttc cgccatcctg attacaagga
     7321 gccagtttca gaggacaagg taccaaacaa ggcgcatttg ttgaccaatg cagatggtac
     7381 gccatttgac tatccatact acattcatga ttcttatgat tcatcggatg cggtcaacaa
     7441 gtttgactgg accaaagcga cagatgaggc gctctatcca gagaataccc gtactcaagc
     7501 ctttacaaaa ggattgattg ccttgcgcaa atcaacagat gccttccgtt tgggaacaaa
     7561 agaagaagtt gaacagaagg ttagcttgat ttcaattcca ggtcaaaatg gtattgctac
     7621 aaatgatgtg gtcattgcct atcaaaccat tgcaagcaat ggggaccgct atgctgtctt
     7681 tgttaacgca gacagcaagg agcgcagttt tgttctttct gatagttaca aagaattgct
     7741 aaagggtcaa gtgctggttg atggtgaacg tgcaggtgta gaagcattgt ctgatttagt
     7801 gggtgttgag ttgactgata gtgcagttgt gcttgcacct ttgactgcaa cggtgattcg
     7861 tttgccttat atcatcacag aagttccaga tacagcacct actgctgaag aaaaaccaac
     7921 cctagacttt actaggaaag aacgtacaga agaatctgtc cttccgattg cagagcaagt
     7981 tcgctatgat gcaactctcg caaaaggtca atcttatgtg cttcaagaag gtaagccagg
     8041 taagagagtc ttggtttatc aagatgtctt ggttgacggc aaggtgatcg ctactaactt
     8101 gttatcagaa acagttgtag atggcgaggc acgcatcctt gtccgtggta gcaaggaagt
     8161 gataaaagaa gtagcgaaat cagacgcagt tgtgaagcaa gaagtattga aaccaagtct
     8221 atctactcca acaactcaag tgtctgaaca aaccacaagt gcatcaaaca aagaaagcct
     8281 accagctact ggtgaccgac aaagcgattt agtgcttcta ggtctcggac ttgcaggact
     8341 tggtttgaca gtcgctgcac aaggaagaac taaaaaatca gaagaatagt atgctttcct
     8401 cccaagaggt tagggaccct atggttcttg acctcttttt tattttgtgg gcagaaacca
     8461 aatcgtcttt taaattttac gatttagaag tagtcaatag aaactttggt aaatagtcca
     8521 agagtgaaca caagcctgtg ctttatttgg tctttttgtt tccgcttaca taacttataa
     8581 taaaaccata aaaatcattt caaaaaagga gaatgaaaaa tggatttcct tcaaacccca
     8641 ttaaactggt tctcacagaa tatcctgcag aatccagcct tcttcgtagg tcttttggta
     8701 ttggtgggct atgccctctt aaagaaaaag cctcatgatg tttttgcagg gtttatcaaa
     8761 gcgacggttg gctacatgat tttgaacgta gcagctggtg gtttggtaac aaccttccgt
     8821 ccgattttgg cggccttgaa ctataagttc caaattgatg cggcagttat tgacccttac
     8881 tttggtcttg cagcagcaaa tgggaaaatt gctgaggagt tccctgattt cgtatcagca
     8941 gccactacag ctctcttgat tggtttcggt gtcaacatcc tcttggtggc acttcgtaag
     9001 gttaccaaag tacgtactct gttcatcact ggacacatca tggtacaaca agcggcaaca
     9061 gtctcattga tggtgctctt ccttatcccg gctcttcgca atcaatttgg tacagcagcg
     9121 attggtatca tctgtggtat ttactgggct gtcagctcaa acatgacagt tgagccaacc
     9181 caacgattga caggtggcgg tggatttgcc atcggtcacc aacaacaatt cgcaatctgg
     9241 tttgttgata agattgctcc aaaacttggt aaaaaagagg aaaacttgga caacttgaag
     9301 ttgcctagct tcctcaacat cttccacgat acagttgttg cttcagcaac cttgatgttg
     9361 gtcttcttcg gtgtcatctt gttcatcttg ggtccagaaa tcatggcaaa cccagaagtg
     9421 atcacttcag gcactccata caacccaact aaacaagcat tcttcatgta cgttgtacaa
     9481 acagccttca ctttctcagt atatctcttc atcttgatgc agggtgtacg tatgttcgta
     9541 gcagaattga caaatgcctt ccaaggtatc tcaagcaaac tgcttccagg ttcattccca
     9601 gcggtggacg ttgcggcttc ttacggcttt ggttcatcta acgcagttct ttcaggtttt
     9661 gctttcggtt taatcggtca gttgattaca atcgttctct tgattgtttt caagagtcca
     9721 atccttatca tcactggttt cgtacctgta ttcttcgata acgcagctat cgcagtgtac
     9781 gctgacaaac gtggtggttg gaaagcggca gccatccttt ccttcctctc aggtgtcctt
     9841 caagtagccc ttggtgcagt ctgcgtcggc ttgcttgaat tgagcggtgg ttaccacgga
     9901 aacatcgact tcgaaatccc atggttgcca ttcggttatg ccttcaaata cctcggtgtt
     9961 gctggttatg ttcttgtttg cttattctta ttggctattc cacaacttca atttgcgaaa
    10021 gcaaaagata aggaagctta ctatcgcggt gaggcacaag cggactaaca ctcttcgaaa
    10081 atcaaaagga tacgtcgtca acttgccttg gtgaactcta gttctaccgt cggctgcgtt
    10141 tcctagtctg cttctgattt tcattgagtg cctgttcttc agtaagacga gagatattcg
    10201 taaatcaaca gaacaaaact tcgtttatta cttggttcat taagaaaaac aacaaaatat
    10261 atttataaaa aacaaggaga aaataagatg gttaaagttt taacagcctg tggaaacggc
    10321 atgggttcat ctatggtcat caagatgaag gtagaaaacg cccttcgtca actcggcgta
    10381 acagattttc aatcagcttc ttgctcagtc ggtgaagcaa aaggtttagc ggcaggatat
    10441 gatatcgtag ttgcttcaaa tcacttgatt tctgagttgg aaggtcgcac gaaaggtcat
    10501 ttggttggtc ttgataacct catggacgac aacgaaatca aaacaaaatt acaagcagtg
    10561 ctataaatag ccgttagggg tagggagtct ccctccccct ttcatatagc gtgtagaagg
    10621 gaaaaactat gaatttacaa aaatcattta cggaaaataa ttccattcgc ttgggtttga
    10681 cagcggaaac ttggcaggaa gctgttcact tggcagttga acctttgatt gaaagtggca
    10741 ccgcaacgga agaatattac gatgccatca tcgcttcaac cgaagaatac ggtccttact
    10801 atgtgctcat gccaggtatg gctatgccac atgcccaggc tggtgtcggt gttttgaaag
    10861 attcctttgc cttgattacc ttgacaaaac cagtagcctt ttcagacggt aaggaagttt
    10921 ccgtcctctt gaccttggct gcgacagatc caaaaatcca tacttcagta gctattccgc
    10981 aaatcatcgc cctctttgaa ttggaaaatt caatcgaacg tttgattgcc tgcaaaactc
    11041 cagaagaagt attggcaatg gttgaagagt ctaaaaacag cccttactta gaaggtttag
    11101 atttagaaag ttaggagaaa aaacatgaaa catattccaa atttacaagt cgcccttgat
    11161 cactcagatt tgcagggagc gattaaggca gctgtctctg ttggtcatga agtggatgtt
    11221 attgaagcag gtacggtttg cttgctccaa gttggtagcg aattggtgga agttcttcgc
    11281 agtcttttcc cagacaagat tatcgttgca gataccaagt gtgcggatgc gggtggtact
    11341 gtagcaaaaa acaatgccgt tcgtggtgcg gactggatga cttgtatctg ttctgcaact
    11401 attccaacca tggaagcggc tttgaaagct atcaaagaag tgcgtggtga caagggcgaa
    11461 atccaaatcg aactctatgg tgactggact tatgaacagg ctcaactctg gttggacgca
    11521 ggtatttccc aagccattta ccaccaatct cgtgacgccc tccttgctgg cgaaacctgg
    11581 ggcgaaaaag acctcaataa agtgaaaaaa ttggttgaca tgggcttccg tgtttctgta
    11641 acaggtggtc ttgatgttga tacccttaaa ctctttgagg gtgtagatgt cttcaccttt
    11701 atcgcaggtc gcggtattac agaagcagca gatccagcag ctgcggcgcg tgaattcaaa
    11761 gacgaaatcc gtcgtatctg ggggtaaggc ctatggcacg accaatcgga atatatgaaa
    11821 aggcaacgcc caagcatttc acatggaagg aacgcttgga gtttgccaaa gaattaggtt
    11881 tcgactttgt ggagatgtcg gtggatgaga gcgatgctcg tttggctcgt ttggaatgga
    11941 ccaaggaaga gcgtttagac ttggtcaagg ctatctatga aacaggtgtc cgcattccga
    12001 ccatttgttt ctcaggtcac cgtcgctacc cgcttggctc caatgaccct gctctcgaag
    12061 ccaagtccct agaaatcatg aaacagtgta tcgaactagc tcaggacttg ggtgtccgtg
    12121 tcatccagtt ggctggttac gatgtttact atgaggaaaa atcgcctgaa actagagaac
    12181 gtttcatcaa gaatctccgc aaggcttgcg actgggcaga acaggctcag gtcatgttgg
    12241 ccatcgagat tatggatgat ccatttatca actccattga aaaataccta gccgttgaaa
    12301 aagaaatcga ctcgccttat ctctttgtct acccagatac gggaaacgtg tctgcttggc
    12361 acaatgacat ttacagcgaa ttttatctgg gacaccgttc tatcgcagcc cttcacctca
    12421 aggataccta tgcggtaact gaaaattcca aaggtcaatt ccgtgatgtc ccattcggtc
    12481 agggctgtgt ggactgggac aatatgtttg cagtcttgaa aaagaccaac taccaaggtc
    12541 cattcttgat tgaaatgtgg tctgaaaact gcgaaacagt tgaggaaaca cgtgcagcca
    12601 ttaaagaggc acaggatttc ctctatccat tgattgagaa agcggggttg aactaatgcc
    12661 aaaagattta caggaaatgc gccaacgggt ctatgaagcc aatatcgccc tacccgctca
    12721 cggacttgtg aagtttacct ggggtaacgt atcagaagtc tgccgtgaac ttggtcgcat
    12781 cgtcatcaag ccttctggtg tggactatga aaaattgtca ccagaaaaca tggtggtaac
    12841 ggacttggat ggaaatgtgg tagaaggtga cctcaaccca tcttctgact tggcgaccca
    12901 cgttgccctc tacaaggctt ggccaaatat acacgctgtt gtccatacgc attcgacaga
    12961 ggcagttggt tgggctcagg ctggtcgcga cattccattt tatggaacaa cgcacgcaga
    13021 ctatttctac ggtccagtac catgtgcccg ttctttgacg gccgaagaag tgaatactgc
    13081 ctatgaaaaa gaaacaggct cagtcatcat tgaggaattt gagcgccgtg gcattgaccc
    13141 agttgctgtt ccgggtattg ttgtccgaaa ccatgggcca tttacttggg gcaaggatcc
    13201 tgctcaggca gtttaccaca gcgttgtctt agaggaggtg gctaggatga accgctacac
    13261 agagcaaatc aatccacggg tggaaccagc accaagctat atcatggaca agcactatct
    13321 ccgtaagcac ggtccaaatg cctactacgg acaaaagggt gatgaacatt aagttcttgt
    13381 gtgaaaaaaa gtagggaaaa gtagcagact ccccaaaaag gagaactgct ttttctcttt
    13441 tgatgaggag aaagatgaga aagtttttac aagatagtct gacagaggtt gcctactatc
    13501 tggagttgat tttatcagcc attttaggat tagccctact agcattgtca ggtttgttgt
    13561 tggcggattt agttggttca ctgacgggtg gtattcaagc ggataacttt atccagagtt
    13621 ttttaagcaa ggctatgacc ttggcagtcg gggtcgagtt catcaagatg ctctgtaaac
    13681 aatcccctag tactgtcatc gaggtgctct tggttgccat tgcccgtcaa ctgattgtgg
    13741 aacatggctc aagtatggac tacttgattg gtattgcgtc ggttgccatc ttatttgcag
    13801 tgagaaaata cctctttacc cagtttgatg attccaacaa catcattatg agggctagcc
    13861 agaaggtcaa ggttgccaat atcattgctc gggtaaaaat tcctagcgag gggacagaaa
    13921 ccctgcgtga atttgtgacc cgcaaactca atgaagaaga aaaaaccatt gccatcggtg
    13981 cctgcgtcta tctgaaaaat gtagcactgc ggattgacaa tatgcatggg gatttgatca
    14041 cacgggtaga aattattaag agcatctatt gacagataaa aaacgctaca tatttatata
    14101 attgttagaa tctatattat aaatatgtta agatagaaag agaggaggga aaaacggtgt
    14161 tactagataa aagcagttgt gccttattgc gtcatttgat tggtatccaa gagccagaaa
    14221 ccattatggc tatttccaag ggcttgcaac aatcgcgtag aaaaatctat tatcatttag
    14281 aaaaaatcaa tgctgccttt ccagaccatg ttgagccaat cgaaagtcta cctcggatcg
    14341 gaatccgttt gtccgcagag caaaagcaag cctgtcgcca actcttagat tccattgatt
    14401 cctatagcta cattatgaat atggatgagc ggatgcagtt gatgctcctt tatatctgca
    14461 ttgcacacga acgaattacc ttggaaaaat tgatggatct gacagaggtt tcgcgaaata
    14521 ccgttctcaa cgatctaaat gaaatccgta gtcgattgag taaggaacag tatcagatga
    14581 ccctctatgt ttctaagtca caagggtacg atctggcctg tcatcccttg acaaaaatcc
    14641 agtatatcca ctctctactc tatagtttgt tcacagaagc gagcaagagt tttgtcagca
    14701 ttttggaaga caaggttagt cttttcagtg gttgccagtc ccttttttca aaagatttag
    14761 cccagttttt gtctcagcag gtttatggta ttgaaaaaga tcttggtaag aaaatcaatc
    14821 gttctgaaat tgaacttatg ctcaagattc taccctatat gttgctaact tatcgcaata
    14881 tgagtttgga gcaagaggag aaggatgcga ttgtccgtga attcgccttg gtctatgaac
    14941 ggattgagta tggtgttgct caaaaaatta gccagtccct agaagagcag tttggtcttg
    15001 atttggacga gatagaggtg tcgctaatcg ccgtcttgct cttatcttat cgaaaggatc
    15061 gggatgccca tgttactagc caggattttg cggatttgaa gaagattgtc gatgtcttca
    15121 tccgtcattt tgagttacat tcagattttg aattggagaa aaaagaggag ctagcccatg
    15181 atttgctggc tcactgcaag gccatgctat ttcgtaaaac ttacgggatt ttatcgcgca
    15241 atcctttggt tgatcaaatt cgctacaagt atgatactct ttttcgattg acaaaatctt
    15301 ctagtcatat tctggaagaa gcctggcaaa tccagttgac agatgaggat attgcttatc
    15361 tgacggtgca tttgggtgga gcccttcgtc gaagcagtag tcgaaagctg accagtccga
    15421 ctgtctttct tatctgtgat gagggagttt ctgtgcagaa attgttgatg aaacaatgcc
    15481 agcaccacct acctgaaaaa accatctctg ccgtctttac aacagagcaa tttaagagcg
    15541 tggaagacct gttggaggtg gacttcttga tttcgaccaa tgaagtgacg gatacggatt
    15601 tgcctgtgat acaagtccat ccgattctgg attttgatga tgtcttgcgt ttgattcatt
    15661 ttgccaaata ccgcaatctg acagacagtc aaaaaggttt tgccatagaa ttggacaaac
    15721 tcctagcgtc atatgttgaa aatggccagg aagccttgga attgaaacag cgtttgcaaa
    15781 atctgattgc caatgaatta ttggcaagct tagctagttc cgatttggaa acagatttgt
    15841 attagccatc tgcgtgcaaa agtccaaatg tgaacacaag cctgtgtttt atttggtctt
    15901 ttttttgtga ccttttgcgc atatactaga agcatagaaa cacaatcagc cttataggag
    15961 gaatgaaaaa tggctaaagt tcaagatatt acaagagaat cctggattct ttcaaccttc
    16021 ccagaatggg gaacttggct caatgaagaa attgaagaag aagtagtgcc agaaggcaac
    16081 tttgctatgt ggtggttagg caactgtggt gtttggatta aaacaccagg tggtgcgaac
    16141 gtggtcatgg acctttggtc atcacgtggg aaatccacta aaaaagtgaa agatatggtt
    16201 tggggacacc aaatggctaa catggccggt gtgcgcaaat tgcaaccaaa cttgcgtgtg
    16261 cagccaatgg ttatcgaccc atttgccatc aatgaattgg actactacct agtatcgcac
    16321 gtccacagtg accacatgga catcagcact gccgctgcca tcatcaacaa tccaaagttg
    16381 gaccacgtcg aatttgtagg accagttgaa agtggcgata tctgggaaaa atggggcgtt
    16441 ccagctgacc gtatcatccg catcgcaccg ggcgacagct ttgaattcaa agacatcaag
    16501 gtccacgctg tagagtcctt cgaccgtact tgcttggtga ccttgccaat cgaaggctac
    16561 gaagaaaacg gtggcaaact agcaggactt cctgtgacag atgaactcat ggctcgcaag
    16621 gcagtcaact atgtctttga aacacctggc ggaaccatct accacggtgc agactcccac
    16681 ttctcaaact actttgcaaa acacggtcgt gacttcaaca tcgacgttgc tatcaacaat
    16741 tacggtgaca acccaatcgg tatccaagac aagatgacat caatcgacct tcttcgtatg
    16801 gcagaaaact tgcgtgctaa ggtaatcatc cctgttcact acgacatctg gtctaacttt
    16861 atggcctcaa cagatgaaat cttgcagctc tggaaaatgc gtaaagaacg cttgcaatac
    16921 gatttccatc cattcatctg ggaagttggt ggcaagtaca cttatccact tgacaaagac
    16981 cgcattgagt accatcatcc acgtggcttt gacgattgct tcttggaaga ttcaaacatt
    17041 caattcaagg ccttgctata agaagacaag aggggcggga cgaaagtcct gccttttgaa
    17101 actgacaagc gaaaacgctt tatggtataa tagaactatg actttattaa aggagaataa
    17161 gatgtcacaa ctttcagtaa atgcaattcg tttccttggt atcgatgcca ttgaaaaatc
    17221 aaaatcaggt cacccgggtg tagtcatggg tgcagcacca atggcttata gcttgttcac
    17281 taaagaactc cgcatcaatc ctgctcaacc aaactggatt aaccgcgacc gctttatctt
    17341 gtcagctggt catggctcta tgttgcttta cggacttctt cacctgtcag gttttgaaga
    17401 agtgactatg gacgagatta aaaacttccg tcaatggggt tcaaaaacac caggtcaccc
    17461 agaatttggt cacacagcag gtgtagatgc gacaacaggt ccactcggtc aagggatttc
    17521 aactgcgaca ggttttgccc aagcagagcg tttccttgca gctaagtaca accgtgatgg
    17581 tttcccaatc tttgaccact atacctatgt aatctgcggt gacggggacc tcatggaagg
    17641 tgtttctgca gaagcggctt cttacgctgg acttcaaaaa ctagaaaaac tcatcgttct
    17701 ttacgattca aatgacatca acttggatgg cgaaacaaaa gactccttca cagaagatgt
    17761 acgtgcccgt tacaatgctt atggctggca tacagatatc gtgacagacg gtacagatgt
    17821 ggatgcaatc tttgctgcta ttgaaaaggc aaaagtagct ggtaagccat ctcttatcga
    17881 aatcaagact gttatcggtc acggttcacc aaacaaacaa ggtacaaacg cagtccatgg
    17941 tgcgccgctt ggtgcagaag aggcagaggc aactcgtaag gcacttgact ggaactacgc
    18001 accatttgaa atcccagccg aagtttatgc agacttcaaa gcaaatgtag cagatcgtgg
    18061 tgcagcagct tacgatgctt gggtgaaatt agttgaagac tacaaagtag ctcatccaga
    18121 attagctgca gaagtaacag ctatcttgga aggtcgcgat gtagtggaag tgaaaccaga
    18181 agacttccca gtttatgaaa atggattctc acaagcaact cgtaactcat cgcaagatgc
    18241 tcttaacgca gcagctaagg tcttgccaac cttcctcggt ggttcagctg acttggctca
    18301 ttctaacatg acctatatca aggaagatgg tttgcaggat gcagcaaacc cactcaaccg
    18361 caatatccag ttcggtgtgc gtgaatttgc tatgggtact atcttgaacg gtatggcagc
    18421 ccacggtgga cttcgtgtct atggtggtac cttcttcgtc ttctcagact atgtgaaggc
    18481 agctgttcgt ttgtcagccc ttcaaggtct tcctgtgact tacgtcttca ctcacgactc
    18541 tatcgcagtt ggtgaagatg gaccaactca cgagccaatc gagcacttgg caggacttcg
    18601 tgctatgcca aacctcaacg ttttccgtcc agcagatgcg cgtgaaacac aggcagcttg
    18661 gtacttgtca ttgactagca agtctactcc atcagccctt gtcctcactc gtcaaaactt
    18721 gacagttgaa gaaggaacag actttgacaa ggttgccaaa ggtgcttatg tggtttacga
    18781 agtagaaggc tttgatacga tcattcttgc atctggttca gaagtgaact tggcggttaa
    18841 agctgccaaa gaattagaaa ctgctggtac taaggtccgt gtggtttctg taccatcaac
    18901 tgagctcttc gatgctcaag acgtagctta caaggaagaa attcttccaa atgctatccg
    18961 tcgtcgtttg gcaattgaaa tgggtgcgac tcaaagctgg tacaagtatg tcggtcttga
    19021 cggtaaagtc cttggtatcg acacattcgg tgcctcagct ccagcccaaa ctgttattga
    19081 caactacggc ttcacagttg aaaatgttgt gaaattggtt ggtgaattgt aatagaaaat
    19141 gtcagagata gcctttcgag gctgtttttg aattttttta aaaattttct tgacaatatc
    19201 gacaatatat gatatattaa tacatgtaaa tatcaatatt gctcccccta ccttctcgac
    19261 tgaggaggta tttttatatt tttaagttaa tagaggggca gaattttgaa agaaatgtgt
    19321 gacaaggaag aagtagtgtt agattaattt tgatagcaga gaataaagaa gtgattttga
    19381 actgttatca gggctgtgct ataatagatt tatgaactat acacatgaag aaaaagagta
    19441 ttttatgact caagcattgc aggaagctag aaagtcgcta gaaaaggatg aaattccaat
    19501 tggttgtgtg attgtcaagg atggccagat tattggcaga gggcataatg cccgcgaaga
    19561 gctcaatcag gcaatcatgc acgctgaggt tatggcaatc caagaggcta acaatgttga
    19621 ggggaattgg cgcttgcttg attcgaccct ttttgtgacg attgaacctt gtgtgatgtg
    19681 tagcggagct attggcctag cacgcattcc gcaggtcatc tatggagcaa ccaacaaaaa
    19741 gtttggagct gcagggagcc tctatgacat tctgacagat gagcggctca atcaccgtgt
    19801 ggcagttgag acgggaattt tggaagagga ctgcgctcag attatgcaag attttttcag
    19861 acagaggcga gaaaagcaaa aagcagaaaa agaggccttg aaagctcagc aagggacaat
    19921 ttcggatagc tagtttacac tctaaacttg cactttcatc gatttgtgtt ataataataa
    19981 acggagcaac attcgtgcgt gaagcgggtc aggggaggaa tccagcagcc ctaagcgaag
    20041 tcgggtgtgt gctctttttg cgtacagtct aaaaaccctt tgaaatcaag ctttcagagg
    20101 gttttctttg gcttgttttt agaaataggg gcaactgcct ttgcaagtac ttttctctcc
    20161 gtctggggac tgatttttgg gattttctat tgatttatag ggaaaaagga gtaaaataga
    20221 tttcctctta agaaaacttt ttgttagctc tgctattcta cagaggaaaa ggaggaaagc
    20281 ctatgtttgt atttgctttt ccaggtatgg ggaaaacgac acttgccaag caatcttcag
    20341 aaattgtaga tttagaaatg tcggatatca aatatgataa ttccagtgtt cgtcatttga
    20401 ataaggaaga aagaaaatca actccacgtc cgattaaaga taagaattat aaaaacatct
    20461 acgtggacaa agcctatgcc ttgcatgagg aggggaagac ggtccttgtc gccatgaatt
    20521 ttctagtaag gatgctgttg gttatgcttg tacatggcgc tgtcccgttt cacatttaca
    20581 ttcctcatcc atctttaaaa gaagaataca gacaacgcta tattcagaga gggaataata
    20641 gcaaatttat ttttgaagtg atgacaatct ggtatgtgag cctggtccca ctatatttat
    20701 tgtcaaaaat agtgccaaat atgataacag tgacacagtc gggtcaagtc ttagcagact
    20761 ataaaactcc tcattacgac actatgtttg tgaaaaataa acaagttacg caaaccattt
    20821 catgaaaata aatgaaaatt cacaaatccc ttgaaaaaaa actgataaag cgttatcata
    20881 ttatggtaca taaatggagg aaaaacatga cacatattac atttgattat tcaaaagtct
    20941 tgggccaatt cgttggagct caagaagtag aatacatgca accacaagtt acccttgcag
    21001 accaaatgct ccgtcaagga acaggtcctg gtagtgactt tatcggctgg ttggatttgc
    21061 cagaaaacta tgacaaagaa gaatttgctc gtatcaagga agctgctgct aaaatccaaa
    21121 atgaaagtga agttttggta gttatcggta tcggtggttc ttacctcggt gccaaagctg
    21181 ctattgattt tttgagcaac tcatttgtaa acttgcaaac tcgtgaagag cgtaaagcgc
    21241 cacaaatcct ttacgctgga aactctatct catcaagcta ccttgctgac ttggtggact
    21301 acgttgctga caaggacttc tcagtaaacg tgatttcaaa atcaggtaca acaactgagc
    21361 cggctattgc tttccgcgtc ttcaaagaat tgcttgtcaa gaaatacggt caagaagaag
    21421 ccaataagcg tatctatgcg acaactgaca aggcaaaagg tgctgttaag gttgaagcag
    21481 atgcaaatgg ttgggaaact tttgtagttc cagatgatgt tggcggtcgt ttctcagtct
    21541 tgacagcagt tggtctattg ccaatcgcag cagctggtgc tgacattgat gcccttatgg
    21601 aaggcgcaaa cgcagctcgt acgacttaca catcagataa gattgctgaa aatgaagcat
    21661 accaatatgc agctgttcgt aatatccttt acagaaaagg ctatgtaaca gaaatcttgg
    21721 caaactacga gccatcactt caatacttca gcgagtggtg gaaacagttg gcgggtgagt
    21781 cagaaggtaa ggaccaaaaa ggtatcaacc caacatctgc taacttctca acagacttgc
    21841 actcacttgg acaatttatc caagaaggaa accgcaacat ttttgaaaca gtagttcgtg
    21901 ttgataaacc aagaaaaaat atcttgattc ctgaaatggc agaagacctt gatggtcttg
    21961 gctacttgca aggaaaagac gttgactttg taaacaaaaa agcaacggac ggcgtacttc
    22021 ttgcccacac agatggtggc gtaccaaaca tgtttgtcac tcttccacaa caagatgagt
    22081 tcacacttgg ttacaccttc tacttcttcg agttggcaat tgcgatctct ggttacctca
    22141 atgcaatcaa cccatttgac caaccaggtg tagaagccta caagaaaaac atgttcgctc
    22201 ttcttggcaa accaggattt gaagaactcg gtgcagaatt gaacgcacgt ttgtaagaaa
    22261 accaaactga tcggaaacgg tcagtttttc tttgcttatt aaatgtggta gaatagagtc
    22321 tatgaaaaaa gaattttttg tagtaggaga tgttcatggt aaatttgaac tcctactcga
    22381 tatgttgaag aaatggaacg aagagcgaca acagttgatt ttcctaggtg atttgattga
    22441 tcgcggggaa aattcaaagg cctgtcttga gttggttcga cagttggtgc gggaaaaggg
    22501 tgcgatttgc ttaacgggca atcatgaacg gatgtttctg gcctggttac gtaatccgat
    22561 tgaccgctat gaccactatc ggagaaatgg tggcgatacg accatcaatt ccttactgga
    22621 gcgccccttg gacgcaccag ttgatggtct ggtggatgct aatgcagtga tggaacaata
    22681 tggggacctg attgattttg tcaaatcttg tccctatcat ctggaaacgg aaggatatat
    22741 ctttgtccat gctggtgtgg acttgacttt accagactgg cgaaaaacta gtaatcatga
    22801 taaggtttgg ttacgtaccc ctttccatga ggccgaaaat accacaggga aaatgattgt
    22861 ctttgggcat acccctgttt ataacctcta ccagaccaag ctccgcatta gccaaatctg
    22921 gaccagtcca gatgggaaaa tggggattga cggtggagct gtttacggcg gagttttaca
    22981 tgggattgtg ctggatgcca caggtttagt tcaagattat atcgttggag ctgttaatcc
    23041 gagaaaagaa attgaagatt aagataatac atgaaaatta
//
LOCUS       DASFQS010000028        21784 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.028, whole genome shotgun sequence.
ACCESSION   DASFQS010000028 DASFQS010000000
VERSION     DASFQS010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 21784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21784
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.028"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..986)
                     /locus_tag="U1041_000914"
     CDS             complement(<1..986)
                     /locus_tag="U1041_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HEM4768034.1"
                     /translation="MNTKKWRTSLLIPGIVLFGTVALVNNVSAQEVKNTIISAKQPDG
                     GQATSKTVNVKIPAVVRLFGRELLENEFKFELREVNSEKLIDTTQNTKEGQVRFKNLS
                     FDKPGEYWYTISEVKNELSGVEYDSKYIVAKITVEDRNNGQLQAMIEFIADDNVFNNF
                     YTPAPAAASLSIKKVLEGRTLNTGEFEFVLKNEKGDEIEKVSNQADGSVNFSALTFTK
                     EGTYTYTVSEVDGGLGDIIYDKSDIKATVTVKDNNHGQLVSTVTYENSDQIFENILKP
                     GKLIAPTTDSVITDNEVSKEAMTDKEKGNIEPPKEQIANEEKDNIEASEKQMP"
     gene            1286..2284
                     /locus_tag="U1041_000915"
     CDS             1286..2284
                     /locus_tag="U1041_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004192896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4768035.1"
                     /translation="MKVLLYLEGKTVLEKSGIGRALQHQMEALDMAGIPYTTDLLGDY
                     DVIHINTYGPRSWLLLHAAKRSGKKVIMHGHSTKEDFQNSFIGSNTLAPFVGKYLASM
                     YQKADFVITPSEYSKKLIQSYGVTTPIIAVSNGIDLDKYKKDERKEAIFREHFKIEEG
                     QPVVVCAGLYFRRKGIEDFVKVAEKMPHVRFIWLGSINKWLIPSYIRKIVEGDHPANV
                     EFPGYFKGAVFQGAMSGADAFFFPSYEETEGIVVLEALASHQHVVLRDIPVYDGWIDE
                     NVAELGHTVDDFVDSIQKILNKQVDKREAGYQVAVSRSIDNVSHQLVDAYRQVLEM"
     gene            2285..3598
                     /locus_tag="U1041_000916"
     CDS             2285..3598
                     /locus_tag="U1041_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4768036.1"
                     /translation="MRIGLFTDTYFPQVSGVATSIRTLKTELEKLGHTVFIFTTTDED
                     VNRYEDWDIIRIPSVPFFAFKDRRVAYAGFTDALKIASRYKLDIIHTHTEFSLGILGK
                     MIAKELDIPVVHTYHTQYEDYVHYIAKGRIIRPGMVKYLVRAFLKDLDGVICPSEIVE
                     DLLMSYNVPISKRVIPTGIDLAKFDRPEIGKDETDELREQLGIASDETMLLSLSRISH
                     EKNIQAIVQAMPKILLENPKVKLVIVGGGPYTDDLQEMIAELNLDEHVQLTGMIAPSD
                     TALYYKAADFFISASTSETQGLTFLESLASGTPILAHSNPYLKNVVTDKMFGTLFVRE
                     QELADAVVEAIVATPPMNPYVLDKKLYEISSTNFGRKVFEYYLDLKISYDFRKEHTNQ
                     DSVAEALIKEAIYLPQKVVVKSTDTTAKILKKSVEQVKSIRNFFE"
     gene            3613..3987
                     /locus_tag="U1041_000917"
     CDS             3613..3987
                     /locus_tag="U1041_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768037.1"
                     /translation="MEKWQKTSWKAMCLAVLLILFMYAGIYLIAFHLNSDTMVSKGLV
                     VGNMLIYTPLVLFLLGLIYGVNKGFSIWLIALVFLLYPVTICFFQEWIVVYQIAYTLC
                     AIFGNGIGALLFSLRKKMRKNP"
     gene            4245..4562
                     /locus_tag="U1041_000918"
     CDS             4245..4562
                     /locus_tag="U1041_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like protein"
                     /protein_id="HEM4768038.1"
                     /translation="MLPDDLLKRCQDVRRAYRELELKHHEKEWSIEEDLLALTNDIGN
                     MNRLIMTKQGRYYDETPYTLEHKMAENIWWLIELADRLDIDIQKEMETFLTQKEELLG
                     IKK"
     gene            4713..6665
                     /gene="thrS"
                     /locus_tag="U1041_000919"
     CDS             4713..6665
                     /gene="thrS"
                     /locus_tag="U1041_000919"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEM4768039.1"
                     /translation="MLKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKL
                     IDTTRAIEEDGTLEIVTPDHEDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGF
                     YYDTDNAAGQISNEDLPRIQEEMMKIVKENFPSERREVTKEEALEIFKNDPYKLELIH
                     EHSDDEGGLTIYTQGEYVDLCRGPHVPSTGRIQIFELLNVAGAYWRGKSENPMMQRVY
                     GTAWFDKKDLKAYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRT
                     LERYITDKELASGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPM
                     NCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTP
                     EQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGA
                     MDEMGVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADG
                     EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVA
                     KELQDRGVRVHVDERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQ
                     TQSVSEFVDHILADIARKSRPAETAE"
     gene            complement(6744..7538)
                     /locus_tag="U1041_000920"
     CDS             complement(6744..7538)
                     /locus_tag="U1041_000920"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM4768040.1"
                     /translation="MQIYAVFGSSIVISKILFSSYTVDKIQPSHLVSNFLLPDTSMWY
                     IWFLILMASATLILHRLQLTEPVSLICIGLFTLFATLFGGPLNISNFPIGLQHLTSLP
                     LFYFLGIYFAKKEIHKKMVRQTVFHSLAVLVAIFYLIYLQFYQTYPNQHLALHTFLRF
                     ANGLAMTYLIVSIIITLERRLPSIIAWFGQYSLYFYLVHTYILTILTLLIKKYFLNFS
                     TPLLLLISFGLLLIINSLVLMIVKRIPILDKVFQGKVISYPQKKHE"
     gene            complement(7502..7783)
                     /locus_tag="U1041_000921"
     CDS             complement(7502..7783)
                     /locus_tag="U1041_000921"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM4768041.1"
                     /translation="MKRLTYIDQLKGFGILAVLFLHTVGYIRNALPYTDIPLWRLEAW
                     LHSFLMPFFVFVSGFSFYHFYLKPKPRNNTYIYIYIDCCKYTQSLAVVL"
     gene            complement(7906..8565)
                     /locus_tag="U1041_000922"
     CDS             complement(7906..8565)
                     /locus_tag="U1041_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4768042.1"
                     /translation="MNYVLELLKPSTFQLLWSGLKLTLYISSISVILSILFGMILAIM
                     RNGKNPIFKWIATIYIEFVRNVPNLLWIFTVFLVFQMKSTPAGITAFTIFTTAAMAEI
                     IRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRKMLPAIISQIVTVIKDTSFLY
                     SVIALQELFGASQILMGRYFEAEQVFALYLMVALIYFSINFAISSLSRYVAKSWASSI
                     E"
     gene            complement(8580..9278)
                     /locus_tag="U1041_000923"
     CDS             complement(8580..9278)
                     /locus_tag="U1041_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4768043.1"
                     /translation="MTVLTTSPYAWENWVSYFKDFPTFFQGFLFTLAISVGAFIMAMF
                     LGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYGLPLISNYVLMPSIYWT
                     AVICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQAETMRIIILPQAIPTILPP
                     LTNQVVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASW
                     GRRIEEKNKSAYSH"
     gene            complement(9293..10132)
                     /locus_tag="U1041_000924"
     CDS             complement(9293..10132)
                     /locus_tag="U1041_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4768044.1"
                     /translation="MDKKKINIFFAIRLLVFGLILLVFAKQPVAQTETPASITNSDQV
                     QAIIDRGVLRVGVKQDVPNFGYKNPDTGEFEGMEIDIARKIADELGVDIEFTPVTAQT
                     RGPLLDNGQVDMVIATFTITEERKLLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKT
                     IGVAQGSITRTLISELADKYGISVNFAELGSYPELSVSLRAHRTDAFSVDQSILSGYI
                     SSKSELMDFSFSASDYGIVTKLSNKDLNNYLNSLVEKWTADGSLQSIYDANGLKPVTE
                     TDE"
     gene            complement(10143..10904)
                     /locus_tag="U1041_000925"
     CDS             complement(10143..10904)
                     /locus_tag="U1041_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4768045.1"
                     /translation="MALVEFKDVNKYYGDYHALRNINLEFEPGQVVVLLGPSGSGKST
                     LIRTINGLEAIDEGTLIVNGHDISSTSIKELVSLRKEVGMVFQHFNLYPHKTVLENVT
                     LAPIKVLGIDKATAEKTAQKYLEFVNLWDRKDSYPAMLSGGQKQRVAIARGLAMKPEL
                     LLFDEPTSALDPETIGDVLAVMQKLARDGMNMIVVTHEMGFAREVADRIIFMAEGEVL
                     VDTTDVNGFFDNPTEPRAKQFLSKIINHESDKVKL"
     gene            11098..11802
                     /locus_tag="U1041_000926"
     CDS             11098..11802
                     /locus_tag="U1041_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005589489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4768046.1"
                     /translation="MKKILIVDDEKPISDIIKFNMTREGYEVVTAFDGREALEVFEAE
                     FPDIVILDLMLPELDGLEVARTIRKTSNVPILMLSAKDSEFDKVIGLEIGADDYVTKP
                     FSNRELQARVKALLRRSELAETQTNIESTGTPELVIGDLVILPDAFVAKKHGKELELT
                     HREFELLHHLAKHLGQVMTREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPE
                     YILTRRGVGYFIKGND"
     gene            11795..13144
                     /gene="vicK"
                     /locus_tag="U1041_000927"
     CDS             11795..13144
                     /gene="vicK"
                     /locus_tag="U1041_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     VicK"
                     /protein_id="HEM4768047.1"
                     /translation="MINQLRYLMTTAEFWFVVILIGFLIALTVLLIENYRDNKQIKQL
                     NQKVNALIEGNYADVLDMRGSPEITDMANSLNDLSEVIRLTHDNLEQEKTRLTSILSY
                     MSDGVIATDRIGRIIMINDMAQKQLGLSNPKQEQYHLLEVLDLSDRYTLRDLLAQTPE
                     IVIDHPNENEEFLTLRANFATIRSESGLISGLVVVLHDMTEQAKEERERRLFVSNVSH
                     ELRTPLTSVKSYLEALDEGALTESVAPSFVKVSLDETNRMMRMITDLLSLSRIDNQVG
                     QIDVELINFTAFVTFILNRFDQMKNADSDKVYTIVRDYQISPIWVEIDTDKMTQVLDN
                     ILNNAIKYSPDGGTITFSMKTTDSQLIVSVSDEGLGIPKADLPRIFDRFYRVDKARSR
                     AQGGTGLGLAIAKEIVKQHKGFIWAKSEYGHGSTFTIVLPYSKDIALDEWDDSDEEE"
     gene            13151..13954
                     /locus_tag="U1041_000928"
     CDS             13151..13954
                     /locus_tag="U1041_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM4768048.1"
                     /translation="MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLL
                     AEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMDIYANELTWQAMESKLGKIDVAQ
                     KHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIV
                     ANADAYLIESNHDVEILRAGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIY
                     LGHLSKENNIKELAHMTMVNQLAQADLGVGVDFQVYDTSPDTATPLTKI"
     gene            14211..15596
                     /locus_tag="U1041_000929"
     CDS             14211..15596
                     /locus_tag="U1041_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4768049.1"
                     /translation="MEMIKCIQLEKEFAGHSLFTIQQLSLQAGQKVGLVGNNGVGKST
                     FLKILLGLDRDFVGQIEVKADWAYVPQLQERSSLSGGEQVWKSIQEAFAQRPQLLILD
                     EPTANLDQEHQEKLIKQIKRYRGSLLVVSHDRHFLNQIASHIWHLEEGSIQVYTGNYE
                     AFVESRRARREGQQEAYEAYQKKVAQLKKAQKERQVKAQKMGKRKKGVSSSEWKVSAM
                     MGSYDSQSKSMAKSAKQLEKRIERLEKVSQPRREAHIKMESKGALDTDLHRLFLLQAG
                     QVLMDEVYLFDFPQIGMTFGEKLALVGANGSGKTSFVRKLLRKELAGYYNPKLKIAYF
                     AQDLINLEEEKTAFENISCTSLQDKMTILNLLGMLGLSYDKAQQKVANLSGGERVRLS
                     LAKVLLADANLLILDEPTNFLDMAAIEALETFLKEYEGSVLLVSHDQQFVETSVHSQW
                     EIVQACLVKKS"
     gene            15688..17760
                     /locus_tag="U1041_000930"
     CDS             15688..17760
                     /locus_tag="U1041_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEM4768050.1"
                     /translation="MKKRKNKPLEHDGNFISLRLNILFSIVIFLFLVLILRLADMQII
                     NHDFYSNKLSTASQKIISNGSIRGQIYDAQGKPLVENEIQQVVSFTRSNKMSAQEMKE
                     VANKLLQWVNVSDVTITQRDKADYYLADEEVYRQVVEALSEDKKYDSDGNYLSESTIY
                     SNAVDSIPAEALQYSEQDSKAIELFKQMNGATYFSTVNLVTDTLTAEQVAHIVANESQ
                     LPGISTTNNWQRTILPTSLSSIIGTVTSEQAGLPAEDAEYYLSKGYSSNDRVGTAYLE
                     KQYEEVLQGQREKKQINLDRNGNVESIETIQEGQQGNNIKLTIDLAFQDGVNAILKKY
                     FESELATGSALYSEGVYAVALEPSTGAVLAMSGYSHEKGSGEITEDALGTITSVFTPG
                     SIVKGATISSGWENGVISGNQVQLDEPIYFAGSAPITSWWAYGSFNIDATEALEYSSN
                     AYMVKIALGLLGQTYSANMYLNDGDTLTNAMTKLRSTFAEYGLGASTGIDLPLESTGF
                     LPDEYTTANFITNAFGQFDNYTPMQMAQYAATIANNGTRISPHLVEGIYGNNAQGGLG
                     ELIETVSGKEMNQVNISAEEMSLLRQGFYQVVNGSGRFNTGSAIGRGAAVTISAKTGR
                     AETYTTTASGDVVTAVNTNVVAYAPSDNPQIAVAVVLPNLTNQSSTTTNTITQEIINL
                     YQSLHPMN"
     gene            17769..18365
                     /gene="recR"
                     /locus_tag="U1041_000931"
     CDS             17769..18365
                     /gene="recR"
                     /locus_tag="U1041_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEM4768051.1"
                     /translation="MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFA
                     KNLLAAKRDLSYCSVCGNLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHG
                     LYHVLHGLISPMNGIGPDDINLKTLLTRLMDNEVTEVIVATNATADGEATSMYISRVL
                     KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL"
     gene            18470..19516
                     /locus_tag="U1041_000932"
     CDS             18470..19516
                     /locus_tag="U1041_000932"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEM4768052.1"
                     /translation="MSKETLILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFIT
                     QTGDFVKTQEFSQTPSADEKLMTNATIVEEQKIRPSDIYEEKAVVFPVLHGPMGEDGS
                     IQGFLEVLRMPYVGTNILSSSVAMDKITTKRILESAGIAQVPYVAVIEGENIDDKIAE
                     IEGKLTYPVFVKPANMGSSVGISKAEDLAGLRKALDLAFKYDSRVLVEQGVNAREIEV
                     GLLGNADVKTTLPGEVVKDVAFYDYDAKYIDNKITMEIPAKIDESIMDIMRDNAAKAF
                     RAFGGCGLSRCDFFLTEDGDIFLNELNTMPGFTQWSMYPLLWDNMGLAYPDLIEELVR
                     LAKEMFEKRESHLI"
     gene            19604..19984
                     /locus_tag="U1041_000933"
     CDS             19604..19984
                     /locus_tag="U1041_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM4768053.1"
                     /translation="MYQTTVKGDGLFQAISQGYGEPVRTFGVTEKGETPVSLVNIGLA
                     SCLTMCVQGYYASQEGNKTMSVQVESRLDNQRFEVLIGIGESVSEQKQKEILAYVEKK
                     CKVKALLREDLKFETSFYVLESVE"
     gene            19986..21062
                     /locus_tag="U1041_000934"
     CDS             19986..21062
                     /locus_tag="U1041_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768054.1"
                     /translation="MFLAIEEMRQNKLRYGLILGLLILISYLVFFLTGLAYGLMQENR
                     TAVDKWQADYVLLNSESNRLITASKIDTALLDQVDASDKALIRQQAGVAYVDENATSG
                     EKEKVNIFAVEADSFIVPNIVEGRLYEKTGEVLVDKTLSEVEGFGLGDQIYLSGSDEK
                     VTIVGYTDNAYFGVAPVVYMDFTVFAELMQADKQQAATSNLASAIVVRGDVASLPNEL
                     EKVAIADFIENLPGYKAQNMTFGFMIGFLIVISAIVIGIFIFVLTTQKSPIFGLMKIQ
                     GLSNSYISGSLLAQTFLLAGVGTVLGLAGTYLSSLVLPSAVPFENNWTFYIAIGLALV
                     VFALLGASFSVGSIFKVDPLRNLS"
     gene            21072..21740
                     /locus_tag="U1041_000935"
     CDS             21072..21740
                     /locus_tag="U1041_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768055.1"
                     /translation="MKTLIFENISKTFQDGSQTITALKPTNFSIEEGEFVAIIGPSGS
                     GKSTFLTLAGGLQTPTTGRVLINQSDYSDLPEKKRAKLRYKDIGFVLQASNLIPFLTV
                     EKQLTLVDKVNKKAEPNKRNELLSELGVDQLKNKFPKDLSGGERQRVAIARALYNDPA
                     LILADEPTASLDSNRAFEVVELLAKEAKERNKSIIMVTHDQRMIEKCDKVYEMKDGVL
                     TQVR"
BASE COUNT         6451 a         3923 c         4993 g         6417 t
ORIGIN      
        1 ggcatttgtt tttcagaggc ttcaatatta tccttctctt cattagctat ttgctcttta
       61 gggggttcga tatttccctt ctctttatcg gtcattgctt ccttagagac ttcattatca
      121 gtaataacgc tatccgtggt tggcgctatt aacttcccag gcttcaaaat attctcgaag
      181 atttgatcgc tattttcata agtcactgtt gagactagtt gtccgtgatt gttatctttc
      241 acagtgacag tggccttaat atctgatttg tcatagataa tatcgccaag tccaccatca
      301 acttctgaaa cagtgtaggt ataggttccc tcttttgtaa atgttagggc actaaagttt
      361 acagaaccat ctgcttgatt gcttaccttt tcgatttcat cgcctttttc attttttaaa
      421 acaaattcga attcaccggt gtttaaggta cgtccctcga ggactttttt tatcgaaaga
      481 ctagcagcag ctggagcagg tgtatagaaa ttgttaaaga cattgtcatc agcaataaat
      541 tcaatcattg cctgtaattg tccgttgttt cgatcttcta cagttatttt tgctacaata
      601 tattttgaat catactcaac accactaagc tcatttttta cttctgaaat tgtataccaa
      661 tattcgccgg gcttatcgaa tgatagattt ttaaatctaa cttgaccctc ttttgtattt
      721 tgagttgtat caataagttt ctcactattc acttctctaa gctcaaattt aaattcattt
      781 tctagaagct cacgaccaaa tagtcgtact actgctggta ttttgacatt aaccgtcttt
      841 gaagtagcct gtcccccatc aggttgtttt gcgctgatga tggtattttt tacttcttgt
      901 gccgatacat tattcactag agcaacagtt ccaaataata ctattcctgg tattaggagc
      961 gatgttctcc atttcttagt attcattatc ctttttcctt tctcaaagca tgatttatgt
     1021 agctaatctg tgtcgttata acatgcaaat tttacatcta aagtcctcaa taaattttga
     1081 atgcttagtg ccagaatgtg caccattcgt aaattataac atcttctaaa aaacattcaa
     1141 gctgtccttc tgcttttaaa atctgtttta tatgtttttt atgtaatcat atatttggga
     1201 ttatattctt tagtattggc ttttattgat acaaaaaata cggtttaaaa tatgaaaaaa
     1261 tgtaaaaaag ggctataatg gtattatgaa agtactattg tatttagaag gtaaaactgt
     1321 tttagagaaa tcaggaattg gccgggcact tcaacaccag atggaagcgc tagatatggc
     1381 aggcattcct tatacgacag acctgttggg agattacgat gtcattcata tcaataccta
     1441 tggtccacgc tcctggttat tgctacatgc agccaaacgg agtggaaaaa aggtaatcat
     1501 gcatggacat tccacgaagg aagattttca aaattccttt atcggttcga ataccctagc
     1561 tccttttgtg gggaaatatc tagcaagcat gtaccaaaag gcagactttg tcatcactcc
     1621 ttcagagtat tcaaaaaaac tcatccagtc ttacggtgtg acaacgccaa ttatagccgt
     1681 ttcgaatggt attgatttag ataaatataa gaaggatgaa cgtaaggaag caatctttcg
     1741 agagcatttt aaaattgaag aaggtcagcc agttgttgtc tgtgcaggac tttacttccg
     1801 acgtaaagga attgaagact ttgtcaaggt agccgaaaag atgccgcatg tccgcttcat
     1861 ttggctcggt tcaatcaata agtggctgat tccgtcatat attagaaaaa ttgttgaggg
     1921 agatcatcca gcgaatgtcg agtttccagg ttattttaaa ggtgctgttt ttcaaggtgc
     1981 aatgagcgga gcggatgcct ttttcttccc atcgtatgag gaaacagaag ggattgttgt
     2041 tctggaagct cttgctagtc atcagcatgt tgttctacga gatattccag tttacgatgg
     2101 ttggattgac gaaaacgttg ccgaattggg acatacagtg gatgattttg tcgattctat
     2161 tcagaaaatc ttaaacaagc aggttgataa acgtgaggcg ggctaccagg ttgcggttag
     2221 tcgctcgatt gataatgttt cccaccaatt ggtggatgcc tatcgacaag tattggagat
     2281 gtaaatgcgg attggattgt ttacggatac ctattttcca caggtttcag gagtcgcgac
     2341 ttcgattcgg actcttaaga cagagttgga aaaattggga catacggtat ttatttttac
     2401 gacgacagat gaggatgtga atcgctacga agattgggac attatccgaa ttcctagcgt
     2461 accttttttt gcctttaaag atcgtcgagt ggcctacgca ggttttacag atgccttaaa
     2521 aattgcaagt cgctataaac tagatattat tcatactcat acagaatttt ctttggggat
     2581 tttggggaaa atgattgcca aggaactaga tattccggtg gtacatactt atcacaccca
     2641 gtatgaagac tacgtacact atattgccaa gggtaggatt attcgtcccg ggatggttaa
     2701 atatttagta cgggcatttt taaaagattt agatggggta atttgtccta gtgagatcgt
     2761 tgaagatctt ttaatgagtt acaatgttcc gatttctaaa cgagtaattc cgacaggaat
     2821 tgacttggca aagtttgata gaccagaaat tggcaaggat gaaacagatg agttgcggga
     2881 acaactagga attgctagtg atgaaacgat gttgctaagt ctatctagga tttctcacga
     2941 gaagaatatc caagcaatcg ttcaggcaat gccaaaaatt ttgctggaaa atccaaaggt
     3001 gaagttggtc attgtcggag gtggacctta tacagatgat cttcaggaaa tgatagcgga
     3061 gcttaatcta gatgaacacg tccagttgac gggaatgatt gcaccaagtg atacagcact
     3121 ttattataaa gctgcggatt tctttatttc tgcttcgacc agtgaaacac agggactaac
     3181 tttcttagaa agcttagctt cgggaactcc tattttggca catagcaatc cctatttaaa
     3241 aaatgttgta acagataaga tgtttgggac actcttcgtt cgagaacagg agttggcaga
     3301 tgccgtcgtt gaggcgattg ttgctacgcc accaatgaat ccgtatgtgc ttgataagaa
     3361 gctctatgag atttcttcta cgaattttgg gcgcaaggtt tttgaatatt atctagattt
     3421 gaagatttcg tatgatttta gaaaagaaca tactaatcaa gatagcgtag cagaagcttt
     3481 gataaaagaa gctatttacc taccgcaaaa agtagtagtt aaatcaacag acacgacagc
     3541 aaaaatattg aaaaaatcag tcgaacaagt aaaatcaatc cggaatttct ttgaataatt
     3601 tggaggtttc aaatggaaaa atggcagaaa acaagctgga aggctatgtg cttagctgta
     3661 ctgcttattc tttttatgta tgctgggatt tatctgattg cttttcatct gaacagtgat
     3721 acaatggttt ctaaggggct tgtagttgga aatatgttga tttacacacc gctagttttg
     3781 tttttgcttg gtctcattta tggtgtcaat aaggggttct ctatttggct gattgccttg
     3841 gtttttctgc tttatcctgt aaccatatgt ttctttcaag agtggattgt agtctaccag
     3901 attgcctata ccctttgtgc tatctttgga aatgggatag gagctctgct attttctcta
     3961 agaaagaaaa tgaggaaaaa tccttgaaaa atcaggaaat cctgttataa tagcttttag
     4021 agacttatca attctaggaa atctttgaga gagtgtgcgg tgggtgcaag cacatagagg
     4081 ataggattga cactactcgg tatgatttta tgcaaacata aaagggtggt tcccttatcg
     4141 ccaatctgag gtagtcaggc ttgaagctgt ggctgcgaat gaaggtggaa ccacgttacg
     4201 acgtcctttt gcgagggcgt cgtgttttct tttgaggagg aatgatgctg cctgatgatt
     4261 tattaaaacg gtgtcaagat gtgcggagag cctatagaga gttggaactc aagcaccatg
     4321 agaaagagtg gtctattgag gaagacctct tggctttgac caatgatatt ggcaatatga
     4381 accgcctgat tatgaccaag cagggtcgtt actatgatga aacgccttat accttggagc
     4441 ataaaatggc tgaaaatatc tggtggttga ttgaactggc tgaccgactg gatattgata
     4501 ttcaaaaaga aatggaaacc tttttaactc agaaagaaga gttattaggg attaaaaaat
     4561 aaaaaataga aaggactagg gtctccgtat ttggttgaac tgaatacggg ctacggactg
     4621 ggccaaaaag ataaacgaga actagacgct tgcgtcgtcg ttctgtttcc tattttggct
     4681 gtgtccgctt aacgcccttt aaatcttata ttatgcttaa aattactttc ccagatggtg
     4741 ctgttcgtga gtaccaggct ggtgtgacaa cttttgaaat tgcagagagc atcagcaagt
     4801 ctttggcgaa aaaggcgctt gctggtaagt tcaatggtaa attgattgac actactcgtg
     4861 ctattgaaga ggacggcacg cttgaaatcg taacacctga ccacgaggat gccttggaca
     4921 tcttgcgtca ctcagctgcc cacttatttg cccaagcggc tcgtcgtctt ttcccagaca
     4981 tcaagttggg ggttggtcca gctattcagg atggtttcta ctatgatacg gacaatgcag
     5041 caggtcagat ttcaaatgaa gacctgccac gtattcagga agaaatgatg aagattgtca
     5101 aggaaaactt cccttccgaa cgccgtgagg tgaccaagga agaagctctc gaaatcttca
     5161 aaaacgatcc ttacaagttg gaattgattc acgagcactc tgatgacgag ggcggtttga
     5221 ccatctatac ccaaggcgaa tacgttgacc tctgccgtgg cccacatgtt ccgtcaacag
     5281 gtcgtatcca gatttttgaa ttgctcaatg tggctggtgc ttactggcgt ggtaagagcg
     5341 aaaatccaat gatgcaacgg gtttatggta cagcttggtt tgacaagaaa gacctcaagg
     5401 cttatcttca aatgcgtgag gaagccaaag aacgtgacca ccgtaaactt ggtaaggaat
     5461 tggatctctt catgatcagc caagaagttg gtcaaggttt gccattctgg ttgccaaacg
     5521 gagcaactat ccgtcgtacc ttggagcgtt acatcacaga taaagagttg gcttcaggtt
     5581 accagcacgt ttatacacca ccgttggctt ctgttgaact ctataagact tcaggtcact
     5641 gggagcatta ttcagaagat atgttcccaa ctatggatat gggcgacggt gaagagttcg
     5701 tacttcgtcc gatgaactgt ccgcaccaca ttcaagttta caaaaatcat gtgcgttctt
     5761 accgcgaatt gcctgtgcgt attgctgagc ttggtatgat gcaccgctat gagaaatcag
     5821 gtgcattgac tggtttgcag cgtgtacgtg agatgactct taacgacggt catatctttg
     5881 tcacacctga gcaaatccaa gaagagttca aaaaagctct ccagttgatc atcgatgtgt
     5941 acgcagattt caacctaaac gactaccgtt tccgcctgtc ttatcgtgac ccagaggata
     6001 aagagaagta ctatgacaac gatgagatgt gggaaaatgc ccagcggatg ctgaaaggtg
     6061 ccatggatga aatgggtgtg gactactttg aggctgaggg tgaagcagcc ttctacggtc
     6121 cgaagttgga tattcaggtg aaaactgccc tcggtaacga ggaaactcta tcaaccattc
     6181 agttggattt cctcttgcca gaacgctttg gtctgaccta tattggtgct gacggtgaag
     6241 aacaccgccc agtcatgatt caccgtggtg tcatctcgac tatggaacgc ttcacggcta
     6301 tcttgattga aacctacaag ggtgccttcc caacttggtt ggctccaacc caagtgacta
     6361 tgattccaat ctctgtggaa gctcacttgg actacgcttg gaaggttgct aaggaattgc
     6421 aagaccgtgg tgttcgagta cacgtggatg agcggaacga gaagatgcaa tacaagatcc
     6481 gtcagagtca gaccagcaag attccatacc agctcatcgt cggtgacaag gaaatggaag
     6541 acaatgctgt caacgttcgt cgctacggaa gcaaggcaac gcaaactcag tctgtatcag
     6601 aatttgtgga tcatatctta gcagatattg cccgtaagtc acgtccagct gaaacagctg
     6661 aataaataaa gcaagaagtc cgaaagggct tcttttttgc atgaaaaact cccaaccgat
     6721 tggctgggag tgcagtacac atgctattcg tgcttctttt gagggtagga aatcaccttc
     6781 ccttgaaata ctttatctag tataggaatt ctttttacaa tcatcaagac tagggaattg
     6841 atgataagga gcaatccaaa acttatgagc agcagcagag gtgtagaaaa atttaaaaaa
     6901 tatttcttta tgagaagagt aagaattgtc aggatgtagg tatgtaccag gtagaagtaa
     6961 agagaatatt gaccaaacca ggcaataata gaaggtaatc ttctttccag agtgattatg
     7021 atagaaacga tcaggtaggt catagccagt ccattagcaa accttaggaa ggtgtggagt
     7081 gctaggtgct gatttggata ggtttgatag aattgtaaat agatgagata gaagatggcg
     7141 accagaacag ccaagctgtg aaaaacggtc tgtctaacca ttttcttgtg aatttctttc
     7201 ttggcaaaat aaatacctaa aaaataaaat agtggtaaag aggttaggtg ttgtaacccg
     7261 attggaaagt tgctaatatt caatggaccg ccaaatagtg tagcgaaaag tgtaaaaaga
     7321 ccaatgcaaa tcagtgaaac tggttctgtt agttgcaacc gatggagaat aagagttgcg
     7381 gaggccataa ggattaaaaa ccaaatatac cacatagatg tatctggcag gagaaaatta
     7441 gaaacgaggt gactaggttg tattttatca acagtgtaac ttgaaaagag gattttgcta
     7501 attacaatac tactgccaaa gactgcgtat atttgcaaca gtcgatatat atatatatat
     7561 aagtattatt tctaggtttt ggttttaggt aaaaatgata gaaactaaag ccactgacaa
     7621 atacaaaaaa tggcataagg aaagagtgta gccaagcttc tagtcgccaa agggggatat
     7681 ctgtatatgg aagagcgttt cggatataac cgactgtatg cagaaataag acagctaaaa
     7741 ttccaaaacc tttcagctgg tcaatgtagg taagtcgttt cataagtttc tcctttattt
     7801 aactctaaac tatttgggaa cagaaccatt tccaaaatgg tttgagtata ttttctttga
     7861 ttatatcata aaaccagctt tcttgagaaa actggttcag attgtttatt caatactgct
     7921 agcccaagac ttagccacat aacgtgacag gcttgagatg gcgaagttga tgctaaagta
     7981 aatcaaggct accatgagat agagtgcaaa aacttgttct gcctcaaagt agcgtcccat
     8041 aaggatttgg ctagcaccga aaagctcttg caaagcgata acggagtaga ggaaactggt
     8101 atccttgata accgtcacaa tctgcgagat aatggctggt agcatcttac gaatggcctg
     8161 tggcatgatg atatagacca tgatttgtac tggggtaaaa ccctgtgaca agccagcttc
     8221 ggtctggccc ggtccgatgg cgtttagacc accacggata atctcggcca tggctgccgt
     8281 ggtaaaaata gtaaaagcag taataccagc aggcgttgac ttcatttgga agaccaagaa
     8341 aacggtgaaa atccaaagta ggtttggtac atttcgcaca aattcgatat agatggttgc
     8401 aatccacttg aaaattggat tttttccatt tcgcatgatg gcgagaatca ttccgaaaag
     8461 aatggacagg attaccgaaa tgcttgagat atagagggtt aacttcaaac cactccacaa
     8521 gagttggaag gttgaaggtt tgagtaattc taaaacataa ttcatcgttc aacctccttt
     8581 tagtgtgaat aggctgactt attcttttct tcaatgcgtc ggccccagct tgcaacaggg
     8641 aagcacatga tgaagtaaag aaaagcagca ccagcaaagg ctgggatgta gttggcattc
     8701 atagcagacc aagattttgt cataaacata atatcagctc cagagatgat ggcaacagta
     8761 gccgtattct taattaagtt cacaacttgg ttggtcaaag gtggaagaat ggtcggaatg
     8821 gcctgtggca aaatgataat ccgcatggtt tcagcttgag taaatccttg tgagagtgcg
     8881 gcttcagttt gcccagtagg cacagcctca atccctgcac gaatgacctc tgcgatatag
     8941 gcaccgtgat agagtccgac gcagataaca gctgtccagt agatggacgg catgagaaca
     9001 tagtttgaaa tcagtggaag tccataataa acaatcatga actgaaccaa cagcggcgtg
     9061 ttctgatagt attcaacata gacacgtgcg atgattttta aaactttatt tttacttgaa
     9121 gagagactac caaagacaat tcctaaaaac atggccatga taaaggcacc gacagaaatg
     9181 gctaaggtaa agagaaaacc ttggaaaaag gttggaaaat ccttgaaata actaacccag
     9241 ttctcccaag cgtaaggact agttgttaaa accgtcatat tgtttcacct ttctattcgt
     9301 cagtttctgt gactggtttg aggccattgg catcatagat gctttgtagg ctaccatcgg
     9361 cagtccattt ttctacgaga ctatttaagt agttgttaag gtctttgttg gataatttag
     9421 taacaattcc atagtcagaa gctgagaagc taaagtccat gagttcagat ttcgaactga
     9481 tatacccaga caggatagat tggtctactg aaaatgcgtc tgtacggtga gcacgtagcg
     9541 agacagagag ttctggataa gaaccaagtt ctgcaaaatt gacagagata ccatatttgt
     9601 ctgctaattc agagatgagg gtgcgtgtaa tggaaccctg agctactccg attgtctttc
     9661 catccaggtc ggtaaatgtc ttaattccac tatccttatt gaccaagaag ccgacagcat
     9721 cagtgtagta aggagttgtg aaattgtaga gcaacttacg ttcttcggtt atggtgaagg
     9781 ttgcgatgac catatccact tgaccgttat caagaagtgg tccgcgagtt tgtgccgtaa
     9841 cgggagtaaa ttcgatatct acacctaatt catctgcaat ttttcgagca atatcaattt
     9901 ccattccctc gaattcacca gtatcagggt tcttgtagcc aaagtttggg acgtcctgtt
     9961 tcactccgac gcggagcacg cctctatcga tgatagcttg aacttgatcg ctattggtaa
    10021 tggatgcggg tgtttctgtt tgagctactg gttgttttgc gaaaacgaga agaataagtc
    10081 cgaagaccaa taatctaatt gcaaagaaaa tgttgatttt tttcttatcc atagactacc
    10141 tcctagagtt ttaccttatc agattcatgg ttgataatct tactgaggaa ttgtttagca
    10201 cgtggttcgg ttggattatc gaagaagcca ttcacatctg ttgtatcaac taaaacttct
    10261 ccctcagcca tgaagatgat gcgatcagct acttcacgag caaagcccat ttcgtgtgtt
    10321 acgacaatca tgttcatccc gtcacgtgcc aatttttgca taactgcaag tacatcgccg
    10381 atagtttctg ggtccaaggc agatgttggt tcatcgaaga gtagaagctc aggtttcata
    10441 gctaagccgc gagcgatggc gacacgttgt ttttggcctc cggatagcat agcagggtag
    10501 gaatccttcc gatcccagag gttaacaaac tcaagatact tttgagcagt tttttcagct
    10561 gtagccttat cgattcccaa aaccttaatc ggtgctaaag taacattttc taacacggtt
    10621 ttgtgtgggt aaaggttgaa atgctggaaa accatgccaa cttctttgcg aagtgatacg
    10681 agctctttga tagaagtaga ggaaatatca tgcccattga cgatgagtgt tccttcatca
    10741 attgcttcta aaccgttaat cgtgcgaatg agagtagatt ttccggatcc ggaaggtcca
    10801 aggagaacga caacctgtcc aggttcgaat tccaagttga tattgcgtag ggcgtggtag
    10861 tcgccatagt atttgttgac atctttaaat tctactaaag ccataaaatt ctccttgcat
    10921 agtgtttttt aggtattccc atcttagcat tgcctatata caatgtcaag taaattctga
    10981 caatttaatg tgttgtatgt tataaaatat aacatagctg tgtcagatgg ttttgaaata
    11041 tgaatttttt aggtaagtct gatataatag aagaaataaa gcaaaggtaa gatactaatg
    11101 aaaaaaatat taattgtaga tgatgaaaaa ccaatctcag atattattaa gtttaatatg
    11161 acgcgtgagg gatatgaagt tgtgacagct ttcgatggac gtgaagcctt ggaagtattt
    11221 gaggctgagt ttcctgacat tgtcattttg gacttgatgt tgccagaatt ggacggacta
    11281 gaggttgctc gaacgattcg taagaccagc aatgttccaa tcttgatgtt atctgctaaa
    11341 gatagcgaat ttgataaggt tatcgggctt gaaatcgggg cggatgatta tgtgaccaaa
    11401 cccttctcta atcgcgaatt gcaggcgcgt gttaaggctc ttcttcgtcg tagtgaattg
    11461 gcagagacgc agacaaatat tgagtcaaca ggaactccag agttggtgat tggcgatttg
    11521 gtcattctgc ctgatgcgtt tgtcgctaag aagcatggca aagagctgga gctgacccat
    11581 cgtgagtttg aattgctcca ccatctggcc aaacacttag gtcaggttat gactcgagaa
    11641 catctattgg aaacagtttg gggttatgat tactttggtg atgtccgcac ggtggatgta
    11701 acgattcgtc gtctgcgtga gaaaattgaa gatacaccaa gccgaccaga atacattctt
    11761 actcgtcgcg gagtgggata ttttataaaa ggaaatgatt aatcaattac gttatttaat
    11821 gaccacagca gaattttggt ttgttgtcat tttgattggt tttctaattg ctctgacggt
    11881 ccttttgatt gaaaactatc gggataataa gcaaattaaa caactcaatc aaaaagtcaa
    11941 tgccttaatt gaggggaatt atgcagatgt gttagacatg aggggaagtc ctgaaatcac
    12001 agacatggcg aattccctca atgatctgtc cgaggtcatc cgcttaactc atgataattt
    12061 agaacaagaa aagacgcgtc tgacgtccat cctgtcctat atgagtgacg gtgttattgc
    12121 tacagaccgt atcggacgga tcatcatgat taacgatatg gcccagaaac agttggggtt
    12181 atctaaccca aagcaggagc agtatcacct gctagaggtt ttagatttat cagaccgtta
    12241 tacattgaga gatttgttgg ctcagacacc tgagattgtg attgatcacc ccaatgaaaa
    12301 cgaagaattt ttgactttac gtgctaattt tgccacgatt cgtagtgaga gtggtctgat
    12361 ttctggcttg gttgtcgtct tgcatgatat gaccgagcag gccaaggaag aacgggaacg
    12421 taggctgttt gtgtcaaatg tgagtcatga attgcgtacg ccattgactt ccgttaaatc
    12481 ctatctagag gctctggatg agggagcgct gacggagtct gttgcaccga gttttgtcaa
    12541 ggtatcctta gatgagacca accgcatgat gcggatgatt acagacctcc taagcttatc
    12601 gcgtattgat aatcaagttg gtcagataga tgttgaactg ataaacttta ctgcttttgt
    12661 gacctttatt cttaaccgtt ttgaccaaat gaaaaatgct gattctgata aggtctatac
    12721 gattgttcgt gactatcaaa tcagtcctat ttgggttgag attgatacag ataagatgac
    12781 tcaggtttta gataatatct taaataatgc cattaaatat tcgccagatg gcgggacaat
    12841 taccttcagc atgaagacca cagatagcca gttgattgta tccgtatcag acgaaggtct
    12901 ggggattccg aaagcagatt tacctagaat ttttgaccga ttttatcgcg tggacaaggc
    12961 acgatctcgt gcccaaggtg gtacaggtct tggtttagct attgcaaaag aaatcgtgaa
    13021 acaacataag ggctttatct gggctaaaag cgaatatggt catggctcaa cgtttacaat
    13081 tgtcttgccg tacagcaagg acatcgcact agatgagtgg gatgattcag atgaggaaga
    13141 ataggagaat atgatcggaa aaggttttaa ttatagtatt ttagcttcgg gatccagcgg
    13201 gaattgtttt tacctagaaa cagataaaaa gaaaatttta gtggatgctg gcttatcagg
    13261 gaaaaagatt accagtcttt tggcggaaat cgatcgaaag cctgaggata ttgatgctat
    13321 cctggtaacg catgaacata gcgatcacat ccatggtatc ggtgttctag cacgtaagta
    13381 tggcatggac atttatgcca atgaattgac ctggcaggct atggagagca aattgggcaa
    13441 gattgatgtg gctcaaaaac atatcttcga attgggtgct atgaagactt ttggcgacct
    13501 agatattgag tcatttggtg tcagtcatga tgcggcctgt ccgcaatttt accgttttat
    13561 gaaggatgac aaatcctttg ttatgttgac ggatacaggc tatgtcagtg atcgaatggc
    13621 tgggattgtg gcgaatgcag atgcctattt gattgagtcc aatcatgatg tcgaaatctt
    13681 gcgtgcgggt tcttattcct ggaatcttaa acaacggatt ttgtcggata aggggcacct
    13741 ttgtaatgaa gatggagctg atgccatgat tcgctcgttg ggaaatcgga ccaaaaagat
    13801 ttacctaggg catttgtcaa aggaaaacaa tatcaaggaa ttagctcaca tgaccatggt
    13861 taatcagttg gctcaggctg atttaggagt tggagtggat ttccaagtct atgacacatc
    13921 gccagataca gcgactccct tgaccaagat ttgacaaatt cattgaactt gtttagaata
    13981 aatatataaa atacgtgagg tgaagttaca tgaataatta agctacttat tagtcgttct
    14041 taaaacttgt aggaggttgt attaaccgat aatacgaggg ataagactgc tcataagggc
    14101 ttactattcg tgtgactttt tccataggga aaggtcatgt tttgcatggc ttttttctgt
    14161 gttcattata gaagtggtga gcccttttct aggtaagaaa agaggtctat atggaaatga
    14221 taaaatgtat tcaattagag aaggaatttg cgggacatag tttgtttaca atccagcagt
    14281 tgagtcttca agctggtcaa aaggttggtt tggttggaaa taatggtgtt ggcaagtcta
    14341 cttttttgaa aatcttacta ggactggata gggattttgt cggtcaaatt gaggtaaaag
    14401 cagactgggc ctatgtaccc cagttacagg aaaggagctc gctttcaggt ggggaacagg
    14461 tttggaagtc tattcaagag gcttttgccc aaagaccgca gttgttaatc ctggatgagc
    14521 cgacagctaa tctggaccaa gaacaccagg aaaagctaat caaacaaatc aaacgctatc
    14581 gaggtagtct actagttgtt agtcatgatc ggcattttct caatcaaata gccagtcaca
    14641 tttggcattt agaagaagga agtattcagg tctatacagg gaattatgag gcgtttgtag
    14701 aaagtcgccg ggctaggcga gaagggcagc aggaggccta tgaagcctat cagaaaaaag
    14761 tcgctcaact aaaaaaagcc caaaaagagc gtcaggtcaa ggctcagaag atggggaaga
    14821 gaaagaaagg tgtttcatcg tctgagtgga aagtcagtgc tatgatgggt tcctatgata
    14881 gtcaatccaa gtcaatggct aagtctgcta aacagttaga gaaaaggatt gagaggttgg
    14941 aaaaggtaag tcagcccaga agggaggctc atattaaaat ggaatcaaaa ggtgccttag
    15001 atactgattt acacagacta tttcttttgc aagcaggtca agttttgatg gatgaagtgt
    15061 atctatttga tttccctcag atagggatga cgtttggaga gaagttagcc ttagtggggg
    15121 cgaatggttc tggaaagacc agttttgtcc gaaaattatt aaggaaagaa ttggcaggct
    15181 attataatcc taagttaaaa attgcttatt ttgcacagga tttgataaac cttgaagaag
    15241 aaaagactgc ttttgaaaat attagttgta cctctcttca agataagatg acgattctca
    15301 atttattagg tatgttagga ctttcttacg ataaggctca gcagaaggta gcaaatctgt
    15361 ctggtggtga gcgtgttcgt ctctccttag ctaaggtatt gttggcggat gcaaatcttt
    15421 tgatattaga tgaaccgaca aattttctag atatggcagc tatcgaagct ttggaaacat
    15481 tcttgaaaga atatgaagga agtgtcctct tggtttccca tgatcaacag tttgtggaaa
    15541 catctgttca cagtcaatgg gagatagtgc aagcttgtct cgtgaagaaa tcataagaaa
    15601 atattttctg aaaaggaggc tctgtctaaa aaatattttt tgcctgtggt ataataagaa
    15661 ggatatttct agaatgaggt ctttgaagtg aaaaaaagaa agaacaagcc tttggaacac
    15721 gatgggaatt ttatttccct tcgtttaaat attttatttt ctatcgtgat tttccttttc
    15781 ctagttttga tattgcgttt ggcagatatg cagatcatca atcatgattt ttatagtaat
    15841 aagctgtcta ctgccagtca gaaaatcatt agcaatggct ctatccgtgg gcagatttac
    15901 gatgcgcaag gaaaaccttt ggttgaaaac gagattcagc aggttgtctc cttcacacgt
    15961 tccaacaaga tgtctgctca agaaatgaaa gaagtagcta acaaactctt gcagtgggtc
    16021 aatgtgtcgg acgtaacaat tactcaacgt gacaaggctg attattattt ggcagatgaa
    16081 gaagtttatc gtcaggtagt cgaggccttg tcagaagata aaaaatacga ttctgatggc
    16141 aactacctga gtgaatcgac aatttattct aatgcggttg atagtatccc tgctgaagca
    16201 ttgcaatatt ctgagcaaga cagcaaggcg attgagctat ttaagcagat gaatggagct
    16261 acttacttct ctactgttaa tttggtaaca gatactctaa cagctgaaca ggttgctcat
    16321 atcgtagcca atgaaagtca acttccaggc atttcaacga ctaacaactg gcaacggacg
    16381 attttaccaa cttccctcag ctctattatt ggtacagtaa cgagtgaaca ggctggtttg
    16441 cctgctgaag atgcggaata ctatctctcc aagggctact catcaaatga ccgtgtggga
    16501 actgcctacc tcgagaaaca atatgaagaa gtattgcaag gtcaacgtga gaaaaaacaa
    16561 atcaatctag atcgaaatgg aaatgtcgaa agtattgaga caatccaaga aggacagcag
    16621 ggaaataata ttaaactgac tattgattta gcctttcaag atggggtcaa tgctattttg
    16681 aaaaaatact ttgaaagtga gctggctact ggtagtgcac tttactcgga aggagtttat
    16741 gcagtcgcat tggaaccttc gacaggtgca gtcttggcca tgtctgggta tagtcatgaa
    16801 aaaggttcgg gtgagattac agaagatgcc ctcggtacta ttacaagtgt tttcacacca
    16861 ggttccatcg tcaaaggagc gacaatcagc tctggttggg aaaatggagt tatcagtggc
    16921 aatcaagtgc agttagacga accaatctat tttgcaggtt cagcaccaat tacatcttgg
    16981 tgggcctatg gtagttttaa tattgatgcg acagaggctc tagaatattc ttctaacgcc
    17041 tacatggtta agattgcttt gggactactt ggtcagacct actcagctaa catgtatttg
    17101 aatgatggcg atacattgac aaatgccatg actaagcttc gttcgacttt tgcagaatat
    17161 ggtcttggtg cttctacagg gattgacctt ccacttgaat ctactggttt tttacctgat
    17221 gaatatacca cagcgaactt cattaccaac gcatttggtc agtttgataa ctacacaccg
    17281 atgcagatgg cacagtatgc agcgaccatt gcgaataacg ggacacggat ttctccacac
    17341 ctcgttgagg gaatttatgg gaataatgcc caaggtggtt tgggagaatt aattgaaacc
    17401 gtatctggta aggagatgaa tcaggttaat atttccgctg aggaaatgtc tcttcttcgt
    17461 caaggtttct accaagttgt caatggtagt gggcgcttta atacaggtag tgctatcggt
    17521 cgtggtgcgg ccgtgaccat cagtgccaag actggtagag ccgaaaccta tacaacgaca
    17581 gcttctggtg atgtggttac tgcggtcaat accaacgttg ttgcttatgc gcctagtgat
    17641 aatcctcaaa ttgcggtagc agttgtccta ccaaacttga ccaatcaaag ttcaacaact
    17701 actaatacaa ttactcaaga aattatcaat ctatatcaat cacttcaccc aatgaattaa
    17761 ggaggcttat gctttaccct acacctattg ccaagttaat tgatagctat tctaaattgc
    17821 caggtatcgg tataaaaacg gctacccgtt tagcttttta tactattggc atggaggatg
    17881 atgtcgttaa tgaatttgct aaaaatttat tggcagctaa gcgagaccta tcttattgct
    17941 ccgtttgtgg taatctgaca gatcaggacc cctgtgccat ttgccaggac tcaacgcgag
    18001 accaatctac tattttgatt gtagaggata gtcgagatgt tacagccttg gaaaatattc
    18061 aagagtatca tggtctctac catgtcttgc atggcttgat ttctcccatg aatggtatcg
    18121 gaccagatga tattaatttg aaaaccctcc tcactcgcct gatggacaat gaggttacag
    18181 aagttattgt ggcgaccaat gcaacagcag atggagaggc tacatctatg tatatctcac
    18241 gtgtcctcaa acctgcggga atcaaagtaa cccgactagc tcgtggctta gcggtaggca
    18301 gtgatattga atatgcagat gaagtgaccc tgttgagggc tattgaaaat cgtacagagc
    18361 tatagcagtt ctgtagttag agacgttcct aattttaaga taggatagat atgatttgtt
    18421 aaattatgct atactaagag taatagcgtt ggtacaggaa ggaaaatata tgtcaaaaga
    18481 aaccttgatt ttactatatg gtgggcgttc tgcagagcgt gaggtgtctg ttctatctgc
    18541 cgaaagcgtc atgcgtgcta tcaattatga taaatttttt gtcaaaacct atttcatcac
    18601 tcaaactggt gactttgtaa agacgcaaga gttttctcaa acaccgtctg ccgatgaaaa
    18661 actcatgaca aacgcgacga ttgttgaaga gcaaaaaatc cgtccgagcg atatttatga
    18721 agaaaaggcg gttgttttcc ctgttcttca tggcccaatg ggagaagacg gatctattca
    18781 aggcttcttg gaagtgcttc gtatgccgta tgttggtacc aatatcttgt cttccagcgt
    18841 tgccatggac aagattacaa ctaagcgtat tttggaatca gcaggtattg cccaagtgcc
    18901 ttatgtggcc gttatagagg gtgaaaatat cgacgataag attgcagaga ttgaaggaaa
    18961 attgacttat ccagtctttg taaaaccagc taatatgggg tcaagtgtcg gtatctcaaa
    19021 agctgaggat ttagctggct tgcgtaaggc gcttgatctg gctttcaagt atgatagccg
    19081 tgtccttgtt gagcagggtg ttaatgcgcg tgagattgag gttggtcttt tgggaaatgc
    19141 tgacgtgaaa accacacttc caggtgaagt agtcaaagac gttgcttttt atgactacga
    19201 tgccaaatac atcgacaata agattactat ggaaatccca gctaagattg acgaatctat
    19261 catggatatc atgcgtgata atgctgccaa ggctttccgt gctttcggtg gctgtggtct
    19321 ttctcgctgt gatttcttcc taactgaaga cggagacatc ttcctcaatg agctcaatac
    19381 catgccagga tttacccagt ggtctatgta tccactcctt tgggataata tgggcttggc
    19441 ttacccagac ttgattgaag agcttgttcg tttggccaag gaaatgtttg aaaaacgcga
    19501 aagtcacctc atttaattat tatcaagatt ggaatcattc caatcttttt tcttgcaaag
    19561 gtttgcaaaa aggaataaaa tggaacaagt tctggaggtg tttatgtatc aaacgacagt
    19621 aaaaggggac ggtctgtttc aagctatctc tcaaggctat ggtgaaccag ttcgtacctt
    19681 tggggtgacg gagaaggggg aaacacctgt tagtctagtg aatatcggct tggcatcctg
    19741 tttgaccatg tgtgtgcagg gctattatgc tagccaagaa ggcaataaaa ccatgtctgt
    19801 tcaggtggag agtcgcttgg acaatcagcg ttttgaggtg ttgattggaa ttggtgagtc
    19861 ggtttcggag cagaagcaga aagagattct tgcttatgtg gaaaagaaat gtaaagtcaa
    19921 agctcttttg agggaagact tgaagtttga gacaagtttt tatgtcttag aaagtgtgga
    19981 gtaagatgtt tttagcaatt gaagaaatgc gacaaaataa gctgcgttat ggcttgattt
    20041 taggattatt aatcctgatt tcttacttgg tctttttcct gactggtttg gcttacggac
    20101 tcatgcagga aaatagaaca gcagttgata aatggcaggc agattatgtc ttgcttaatt
    20161 cagaaagcaa tcgtttgatt acagcatcca aaattgatac agccttgctt gaccaagtag
    20221 atgctagtga caaggccttg attcgccaac aagctggagt tgcctatgtg gatgaaaatg
    20281 ccacctcagg cgaaaaagaa aaggtaaaca tctttgccgt agaggctgat agttttatcg
    20341 tcccaaatat tgtagaaggt cgtttgtatg aaaaaacggg agaagtcctt gtagacaaaa
    20401 ccttgtcaga ggtagaaggt tttgggcttg gagatcaaat ctatctatca ggttctgatg
    20461 aaaaagtgac cattgtaggt tatacagaca atgcctactt tggagtggcg cctgttgtat
    20521 atatggactt tacggtattt gcagaattga tgcaggctga taaacaacaa gctgcaacga
    20581 gtaatcttgc cagtgccatt gtcgttcgtg gagatgtcgc ttctctacca aatgagctgg
    20641 aaaaagttgc tattgcagac tttattgaaa atctgccagg atataaggca caaaatatga
    20701 cctttggctt tatgatagga ttcttgattg tcatctcagc cattgttatt ggtattttta
    20761 tctttgtgtt gacaacacag aaatctccga tttttggctt gatgaaaatt caaggtcttt
    20821 caaatagcta tatttcaggt tctttattgg ctcaaacctt cctacttgct ggtgtgggaa
    20881 ccgtccttgg attggctggg acttatttgt catcccttgt cttgccaagc gctgttccat
    20941 ttgagaataa ctggaccttc tatattgcaa tcggcctagc actggttgta tttgccctat
    21001 tgggtgctag tttctctgta ggttctatct ttaaggtaga tccattacga aatctatctt
    21061 aggaggttgt tatgaaaaca cttatttttg aaaatattag taagaccttc caagatggca
    21121 gccaaactat tacggctctt aaaccaacaa attttagcat tgaagaaggc gaatttgttg
    21181 ccatcattgg accatctggt tctgggaagt caacattttt gaccttggca ggtggtttac
    21241 aaacaccgac aacgggtcgt gttttaatca atcaatcgga ctattctgat ttacctgaga
    21301 aaaaacgtgc caaattgcgc tataaggaca ttggttttgt cttgcaggct tccaatttga
    21361 ttccattttt aacagtcgaa aaacaattaa ccttggttga taaggtcaat aagaaagctg
    21421 aaccgaacaa gcgaaacgaa ctcctatctg aattgggtgt ggaccaactc aaaaacaagt
    21481 tccctaagga tttgtcaggt ggggagcggc agcgtgtagc aattgcacgt gcactctaca
    21541 atgatccagc tttgattcta gctgatgaac caacagccag tctagacagt aatcgcgctt
    21601 ttgaagtggt tgagttatta gctaaggaag ccaaagaacg gaacaaatcc atcatcatgg
    21661 taacacatga ccagcgcatg attgaaaaat gcgacaaggt atatgagatg aaagatggtg
    21721 tcctcactca agttcgataa aaagtggtat aatgggagcg ggaaagaact cgaaaggtca
    21781 aaaa
//
LOCUS       DASFQS010000029        21612 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.029, whole genome shotgun sequence.
ACCESSION   DASFQS010000029 DASFQS010000000
VERSION     DASFQS010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 21612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21612
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.029"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..119
                     /locus_tag="U1041_000936"
     CDS             <1..119
                     /locus_tag="U1041_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000410306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type A2 lantipeptide"
                     /protein_id="HEM4768056.1"
                     /translation="VSLEELDQIIGAGKNGVFKTISHECHMNSWQFLFTCCS"
     gene            148..303
                     /locus_tag="U1041_000937"
     CDS             148..303
                     /locus_tag="U1041_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000410306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A2 lantipeptide"
                     /protein_id="HEM4768057.1"
                     /translation="MKKDIELMSTIQEVSLEELDQIIGAGKNGVFKTISHECHMNSWQ
                     FLFTCCS"
     gene            842..1009
                     /locus_tag="U1041_000938"
     CDS             842..1009
                     /locus_tag="U1041_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006731084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A2 lantipeptide"
                     /protein_id="HEM4768058.1"
                     /translation="MNAKTNKEINYEAVATLQEVKIDDLDILLGGAGHGVNTISAECR
                     WNSLQAIFTCC"
     gene            1028..3808
                     /locus_tag="U1041_000939"
     CDS             1028..3808
                     /locus_tag="U1041_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002303301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 lantipeptide synthetase LanM family
                     protein"
                     /protein_id="HEM4768059.1"
                     /translation="MVGSEILYNQFNTFQKVVLERYFPELLLEDGDIIDEIGKKILDY
                     YRPTLIYLINEKRIEGSLVGSTPEIRYDFFNNVLCRKGIILDEIEQRFPEINHRVVLS
                     IQKYLSLVEFVKNTFISDFSELVAKKYINSTCVTPNISDIKLNVTGDIHNGDGVCIVS
                     YRGQKVVLKKKSAKPNILLARLDSRVSAYLDKEIHFIPSFLNKGNYFWEKFVISKPIN
                     SKNEAEEFYRRIGYLLGYSYILNISDLHFENLISSNLTPILVDVETIFSISPFDTLVG
                     NKATFHIIEKSRDSVLSTGLLPIADSDDVFGGDTSGVLGGTFFGEVKVVVNHNRDDIR
                     IEKKKYQIKNQEHLPYFLNSGGEKHYLNAVEYIEFIKEGFRELGNFFVKEKQYLKNLY
                     LNHSDIQTRILFRNTKDYSLIRQLLISPVYCDKSKVLFEKMSNKLNEYDCDMLIQSEK
                     NQLLNMDIPYFSTSINSCDITDGERKIWKLKISALNTALKKLERLSDELIEEQIDLIE
                     FSLKTTQALYSTELQEEYRKYDCTSVDDGILNEGINALVDIILDDEKYSLEDDSTNWL
                     TLKVNDHDAFELVPMDNSVYEGIAGMAIALSEAYDLVDPSRQERIMDCLKRILSTLLN
                     LYTKIENPTYFVGKLGVFSAISRISLITGQRLPDDIFKIRDQYCLNLNTSQADFLSSF
                     PNEIVAFRNTDTNIENLAQSLVKLKELGVNNNDYICWNRLEANNVSLAHGNLGVEVAL
                     LFLAYKSNRSEALDLFNKARTFENQQKLGEGWIDKRNGETSANWCHGSTGVLVARLAQ
                     LQLNDKYNILSDSEVEELRRDVEHAVKQIIEIGFDMTNFSLCHGTSGNLLALSYYLNY
                     MENCQSKKLKGIVDREYKKLHSFGLEKGWMCSFNTKYNVYGLMTGIPGILFSTAKYLK
                     EDKSLDILIPSV"
     gene            3831..5903
                     /locus_tag="U1041_000940"
     CDS             3831..5903
                     /locus_tag="U1041_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002268663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4768060.1"
                     /translation="MKIILQNNEEDCLLACYTMMLNDLGHRIPLHEVCNKDSLPADGL
                     SLSYLLTLNDRFGVTINAYRTSFDDLLKIYEETKRRMIIHWNNDHFVVLEKIKTDRVL
                     IVDPAIGRIRYHKSEFMEHYSGTMIMVNKGNEFKPERYNPIFWSYFKKTLQVKPISLF
                     ILSLLFIQASVLLFSINLRQMLTDEFKFSANLFLLSFVLVFQLLGYFVKNRALNKYNR
                     DFDKYYSKELFIRLLKKPLLYFRNHLSGGVSEKINLKSILRDNVTLKIIPSFISLISA
                     LVIFIYLMTISVKLTVILVVMISVYSIFSILLYYKQSEYNQTYLQYLIDFNSELQTDL
                     DDIDYIKIMRKEDKIFNSWVTVNNKVTTKYSQILRIENLSQLIGTIFNYISLSSIIVI
                     SVYYNNYIEVSLSDLLVYQTSISLLISAIEQVKGAIFEILRLEIYAEKQSDLLKDSAP
                     ITVPSSESNDYLIQTDNLNFSYGNKPIYKNINLTVKKGEKIAIVGKSGSGKSTLLLLL
                     AGMLRYNGSIRYGIVGFEDYISVVLQNMTLRKGSILENLEWTSNDLSPLYQILKDTAA
                     DEVISQLPNKIYSKLLKQGKNLSGGQIQKLLIAKSLIKDNGIVFWDEAFSNLDEHSKN
                     RIYENVLQSSRYSDKTMLIVSHHLDIVNFVDNVIFIDEESGEVIKDSHKNLMETNVNY
                     GKFICSSF"
     gene            6013..6921
                     /locus_tag="U1041_000941"
     CDS             6013..6921
                     /locus_tag="U1041_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768061.1"
                     /translation="MKNVIELRRLSKVYKDITTVDLEKITVREGEIYGFLGPNGAGKT
                     TTMKMILSLISPTSGEIIVTGSNIQNGKGYLKQIGSMIEEPSYYPNLTGYENLMVFQK
                     MVGFAKENIWPTLELVGLSEEKNRKKLVRDYSLGMKQRLALAFALVKKPKILLLDEPT
                     NGLDPAGIHEIRELIVKLAKEEGLTVFISSHILTEIEYIADRVGIINHGRLVYEGEIE
                     AIKANRWVEIGGDFSQNNIVQSLVEFGSVEVLGATASYVKISDIDNDKLADVVSYLTK
                     SGYRIFRVVRESETLEDIFLELTKEV"
     gene            6923..7687
                     /locus_tag="U1041_000942"
     CDS             6923..7687
                     /locus_tag="U1041_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768062.1"
                     /translation="MRGIYIEWLKSKRTKSFSIVTILIIVATLWNIVTFNSAFSSHPE
                     LKGVEILFSNQNVNLLMLPIAVCVFAARIVWNEREGQTFKLQFSNGHNLLTIFANKFL
                     FMVIIFSFMSILEVIAICIFGQQVGIRIPFSVILFQLFAQFLSVYSLICIYLFLAIVV
                     EKQGLLLALGLLGGFLGIVLTPRSYGFSSLINPITGFGSLAPYKYQSLGGGEFAYIFD
                     SQLFWKLIIYSVYCLLLYAIANLVLRKRGNKDGKLF"
     gene            7671..8405
                     /locus_tag="U1041_000943"
     CDS             7671..8405
                     /locus_tag="U1041_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768063.1"
                     /translation="MGSYFKAEWKKARKIQLLLIGMAFLTFSSFIGLGIYFSNRDVLV
                     EGTQSLVLWGQLTFYNSTLLYPPMLAIIAGLLIIPEFERKNLEMLKANQVSMWKLYFG
                     KLLCSFFIILPVQLVLLIIFIIAIHADGIILDLSLQTYIKWLLLSLLASVPIIILQSY
                     ITVKTRNFSKSIGIATVGSVLNFVLIFINEDLTKFFPYSQPMVALRSRALTDMSFGNL
                     SIFLVVNSIFSILFYKLTVDVLEKNN"
     gene            8571..8795
                     /locus_tag="U1041_000944"
     CDS             8571..8795
                     /locus_tag="U1041_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000286254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768064.1"
                     /translation="MYRRIRDIREDHDLTQQNVSDYLSITRSAYAKIERGEHTLSAEV
                     LIQLSNLYNVSTDYLLGQTDFPHRIKNNLK"
     gene            9073..9300
                     /locus_tag="U1041_000945"
     CDS             9073..9300
                     /locus_tag="U1041_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3173 family protein"
                     /protein_id="HEM4768065.1"
                     /translation="MRTATYKDLMNLGFPEHTSRDIIREAKRIAVKKFEEARKVDHNA
                     VQLSKSPFDNRRLGIAPAEIVEQLIGIPLSK"
     gene            9323..10525
                     /locus_tag="U1041_000946"
     CDS             9323..10525
                     /locus_tag="U1041_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4768066.1"
                     /translation="MVTKSSKKYKGVYCDNKGKIFYQIDLGIDPVTGKRVQKKARKNQ
                     YGKTFETMKEAYDELVRIKYEFANKVSLENYNMTFENYMNKIYLRAYKQKVQSVTYKT
                     ALPHHKLFIQYFGSKPLKAITPRDCEAFRLHIIENYSENYAKNLWSRFKACMGYAERL
                     GYISDMPCKALDNPRGKHPETPFWTYAEFQTFVKSFDLHDYEELQRFTAIWLYYMTGV
                     RVSEGLSLCWEDIDFENKFLKVHTTLEKDENGNWYRKDQTKTPAGERLIELDDITIEV
                     LQVWRKNQFANQETDFIISRFGDPFCKSTICRIIKRKAQQVGVPVITGKGLRHSHASY
                     LINVLKKDILYVARRMGHADKSTTLNTYSHWFNALDKTVSEEITQNIKSAGLDSILCQ
                     NSCQTSNL"
     gene            10708..11457
                     /locus_tag="U1041_000947"
     CDS             10708..11457
                     /locus_tag="U1041_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4768067.1"
                     /translation="MKSYKNYIFDFYGTLVDIRTDENKLEVWNQLTQIYNAFGCSYRP
                     RQLKNAYHRFVEEAERSLAETVSYQYVEIDLETIFIRLLTDAPNENQSTNKPTDLETF
                     GQVVATIFRVLSREKLEAYENTLTSLQTLKDREARLFILSNAQRIFTQAEIEQTGCAD
                     LMEKIYISSDFKMKKPEPAFLQLVLEENNLDVEETVMVGNDLTSDIAIAHELGMDSIL
                     LNTFPYSQEEIDSYRRLCWNFEVVGDIAELL"
     gene            11653..12987
                     /gene="trmFO"
                     /locus_tag="U1041_000948"
     CDS             11653..12987
                     /gene="trmFO"
                     /locus_tag="U1041_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000083753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HEM4768068.1"
                     /translation="MSQTHINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKPTPQHK
                     TDKFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRAGEAHRVPAGGAMAMDRENF
                     SQAVTDEIHNHPLIEVIRGEITDIPDDAITVIATGPLTSDALAEKIHALNGGDGFYFY
                     DAAAPIVDSSTINMDLVYLKSRYDKGEAAYLNAPMNKEQFTAFYEALISAEEAPLNSF
                     EKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPEDYKGPRDGEYKTPYAVVQLRQ
                     DNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQT
                     FATKKNPNLFFAGQMTGVEGYVESAASGLVAGINAVRRFRGEEPVIFPQTTAIGALPF
                     YITHTESKHFQPMNVNFGIIKELDGPRIRDKKERYEAIAERSLKDLEEFLAY"
     gene            13172..13996
                     /locus_tag="U1041_000949"
     CDS             13172..13996
                     /locus_tag="U1041_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM4768069.1"
                     /translation="MNKSYFYLDMKTHELEVPFTGRNRRIRVLLPKGYEEDTDTTYPV
                     VYFHDGQNVLYSKEAFSGHSWKAIPTIKRNPDIAKMIIVAIDNDGAERMHEYAAWKFS
                     EMGIPGIQFGGKGTLYAEFVMDVVKPFIDQEYRTKSDKAHTAMIGSSLGGNITQFMGL
                     AYQDQIGCLGVFSSANWLHQEAFDRYIERQNLDKDQRVYIYVGTEEADDTDKTLMAGN
                     IKQSYINSSLTYYRQLIAGGVDLDNIALEVVSGAVHSEEAWATYLPDCLRFLSEKW"
     gene            14025..14771
                     /locus_tag="U1041_000950"
     CDS             14025..14771
                     /locus_tag="U1041_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM4768070.1"
                     /translation="MHVEFLSHWSGNLGREMNLNRYGHAGIPVVVFASSGGSYNEYAD
                     FGMIEACRGSIEAGHVQFFTLTSHDKESWLADWKSIHDKAEAHRAYERYVIEEAIPFI
                     KHKTGWFDGMMTTGCSMGAYHALNFFLQHPDVFTKVIALSGVYDARFFNNNQDYGNDD
                     AVYQNSPSDYIWNQNDGWFIDKYRQADIIVCTGLGDWEQDGLDSFYNLKRAFEEKNIP
                     AWFDTWGTDVAHDWVWWRKQMPFFLHSIGL"
     gene            14789..15955
                     /locus_tag="U1041_000951"
     CDS             14789..15955
                     /locus_tag="U1041_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HEM4768071.1"
                     /translation="MNYLVISPFYPENFQPFTIELAKKEGVTVLGIGQEPYEQLPEEL
                     RNALIEYFRVEDLENIDEVKRAAAFLIYKHGPIDRVESHNEHWLENDAALREQFNIFG
                     AKPKHLKKTKFKSEMKKFFSKAGVPVVPGMVVKTEKDIEKAVKSIGFPMIAKPDNGVG
                     ASGTFKLTKKAGIETFKNAWDGQTAYFFEKFVNSSIITTYDGLVDHEGNVVFETGLTY
                     VHTPLELMLSRKDNAYFIEKELDPQLVKYGRAIIKAFGMKERFFHIEFFKDGKDYIAI
                     EYNNRMAGGFTVEAYNYAYSIDLFRDYANVVTGATVEERRFEPQYCLVATRRDTTEYV
                     HSADDIHQTFAGKIKTVKRMPDAFAELQGNDAYLLVTESKKELDEMIAYIGLTK"
     gene            16090..16230
                     /locus_tag="U1041_000952"
     CDS             16090..16230
                     /locus_tag="U1041_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768072.1"
                     /translation="MSFKFLQAKKMEEVVFSEKEKAELLEQAEFLEELSHNLQSMRFM
                     AY"
     gene            16243..16626
                     /locus_tag="U1041_000953"
     CDS             16243..16626
                     /locus_tag="U1041_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NisI/SpaI family lantibiotic immunity
                     lipoprotein"
                     /protein_id="HEM4768073.1"
                     /translation="MKKKVFGLLALGSIMLTACSSSSAGLSFDEGYQTFHYKGKDYAV
                     SKQEVAEDSIRGTEAKFMEWPVVKEESSVKETVSLNNLYTTSNKEWAIGVQGGYYKVD
                     LEDNIAESDRIDYQAVLDQVDLDSE"
     gene            16643..17395
                     /locus_tag="U1041_000954"
     CDS             16643..17395
                     /locus_tag="U1041_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018029787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768074.1"
                     /translation="MLLEINHLEKVYRTRFSKEETRALQDVDFKVEEGEFIAIMGESG
                     SGKTTLLNILATLDKPTRGSVILNNQDITKIKESKLADFRLRNLGFVFQDFNLLDTLS
                     IQDNIFLPLVLARASHQEMEKGLKALAPKLRIQDLLKKRPFELSGGQKQRVAIARSLI
                     TQPQIVLADEPTAALDYRNSEDLLNLFEDINRDGQTILMVTHSANAASHAKRVLFIKD
                     GRIFHQLYKAGKSNQDFAKEISLNMSALLGGE"
     gene            17396..19366
                     /locus_tag="U1041_000955"
     CDS             17396..19366
                     /locus_tag="U1041_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM4768075.1"
                     /translation="MFYLKLAGQNIRKSMGVFAPFVLASLVLFTLICSMFLLMLSPVM
                     KTMGSGAISIGLGVVVLTIFSVIMEIYSFNFLMKQRAREFGLYNMLGMNKKKVALIAS
                     LELIMIFLLVVVLGSVLAGVFANVLYLIFVNLTNYSDLHFSISPLAFAMTASLFAGIF
                     FLLELLAIRTIGKTSPLILFRASEKGEKEPRGNFLLAALGVLSLGVGYYLSLSSQSAG
                     VGVIIRFFIAVLFVIAGTYLFYISFMTWYLKARRKNKRYFYTPEHFITTSQMIFRMKQ
                     HATGLANITLLAVMAFVTIATTTSLYTGMSSMTSGLYPKETSITYKVADRSQGESAYQ
                     QSVLSHFPEKAEDSLSYLTYQAGLVYDGGKEIVISPETIANPDFSKIAFTYFVTQDDF
                     RKLGNDLPELAANQVAFIRPSEMPLLEKVTLGDSTFENVVNLDTAIFPDITNTLNAAV
                     MVVSDDTVLDAVREYYESNNPQGSLVSLDYRVFTDLTDEEVAKVGEQAGDTYNISDAN
                     GESFGYAMQKTDFNNMLMGLRGGFLFTGFLLGISFLLGAALIIYYKQYSEGHEDKKSY
                     KILQEVGMSAAAVKKTINSQTLTVFFMPLAMATLHFVISLVMLKQMLLTLGVTSSLMI
                     YTVSGITLLAVALIYFVIYKWTSRTYYRIIER"
     gene            19459..19710
                     /locus_tag="U1041_000956"
     CDS             19459..19710
                     /locus_tag="U1041_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HEM4768076.1"
                     /translation="MAAITLKVSEQDKLFMQAMAKFEGVSLSELIRTKTLEALEDEYD
                     ARVADIALAEYEADLAKGIEPISWEEMLEELGLTDEDLL"
     gene            19694..19960
                     /locus_tag="U1041_000957"
     CDS             19694..19960
                     /locus_tag="U1041_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEM4768077.1"
                     /translation="MKTCYKLVPTSRFIKQLKKLDKFTQKQITNYLSSHVTDNPRQYG
                     KALTANRSGQWRYRIGNYRVIVSIEDDKLIVTALEVGHRKEIYK"
     gene            19999..20667
                     /locus_tag="U1041_000958"
     CDS             19999..20667
                     /locus_tag="U1041_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002274458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4768078.1"
                     /translation="MMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVA
                     EIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFISSSDDEMNAVMAMNMGGDDFVS
                     KPFSLGILDAKIGAFLRRVNQFSKSSELSIDQFQLSLDGRFTNKSEQVQLSPTETKIL
                     SALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVG
                     YLVK"
     gene            20664..21605
                     /locus_tag="U1041_000959"
     CDS             20664..21605
                     /locus_tag="U1041_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4768079.1"
                     /translation="MITKFIREYRSFYFSYIVLSGSFILLFYLYQLPSEFLQNALLLS
                     LTLIILLTVGLFWKFRNRMRALEDYVHEEALPLLNKPVDLAYLNLIEAEKEATREQLL
                     EYKSREEDLQAMVKMWSHQMKVPLAALSLMSQTDNLNQQDVDHQLLRLDNYMANLLNY
                     LKLTNHASDFRFEQVEVREVVVDLVKKYRNQFLQKDISVTIDGNWLLKTDRKWLSFAL
                     SQIIDNALKYNKTGGKVAIELNNGISISDTGIGILAEDIPRLFDEGFTGFNGREHQKA
                     TGFGLYLTKRVLNQLELGINVESRVDVGTTVTITKVQ"
BASE COUNT         6916 a         3544 c         4471 g         6681 t
ORIGIN      
        1 aagtaagtct tgaagagttg gatcagatta ttggtgctgg aaaaaatgga gtttttaaaa
       61 ctatctcaca tgaatgtcac atgaattcat ggcagttttt attcacatgt tgctcgtaaa
      121 aaaatttttc aaagagaggc gactaaaatg aaaaaagata ttgaattaat gagtacgatt
      181 caagaagtaa gtcttgaaga gttggatcaa attattggtg ctggaaaaaa tggggttttt
      241 aaaactattt cgcatgaatg tcatatgaat tcatggcaat tcctatttac gtgttgttca
      301 taaatatata catttagata tctttgaagt tacgtaatgg aggatttcct ctgacaattt
      361 acagacagac tcaaaattat tttggtctgt ctttttttga taacgctggg catggctaca
      421 tttaagatga aagtactctg gggacacctg ctagcgagta acccaatagg actcaaaatg
      481 ctgactatta tgaggtggca aggataggga ggaatagtga aatggtggtt ctctgaacag
      541 aaatgttatg taaggtatat atggaggatg agaagaccaa aaattctaaa tacctagaaa
      601 cctacctagc aatgtgagag ttagggagct catatcttgt gtaaacgagg aaagatgcag
      661 gacttatccc tagaggtctc atgtgaagtt gatcgttgcc atagaagtga cgaatatttt
      721 gtaatgtata aatttattta aaatttatta tttcttaaac ttatctttaa gtaagagtac
      781 taaaattatc atatagagaa gtgcactgac taaactaata ttaaaaagaa ggtaaaaaat
      841 tatgaatgcg aaaactaata aagaaataaa ttatgaagca gttgctacac tacaagaagt
      901 aaaaatcgat gatctggata ttcttttagg aggagcaggt catggtgtta atactatttc
      961 tgcggaatgt cgttggaata gtttacaggc aatcttcaca tgttgttagt ttttggaggg
     1021 gaacagtatg gtgggtagcg aaattttgta caaccaattt aatacttttc aaaaagtagt
     1081 tcttgaaaga tactttccag aactattact ggaggatggt gatatcattg atgagattgg
     1141 gaaaaagatt ttagattatt atcgtccgac gctaatttat ttaataaatg agaagcggat
     1201 tgaaggaagt ctagtagggt ctacaccaga gattcgttat gactttttta ataatgtctt
     1261 atgtaggaaa ggtataatat tggatgagat tgagcaacgt ttcccagaaa taaatcatcg
     1321 cgttgtactc agtattcaaa aatatttaag tttggttgaa tttgtaaaaa atacatttat
     1381 ttctgacttt tcagaattag tagcaaaaaa gtacattaat agtacgtgcg tgactcctaa
     1441 cataagtgat atcaaactta atgttactgg agatattcac aatggtgacg gagtatgtat
     1501 tgtatcttac cgaggacaaa aggttgtatt aaaaaagaaa tcagctaaac caaacatact
     1561 tttggctcga ttagattcta gagtcagtgc ttatctagat aaagaaattc attttattcc
     1621 tagttttttg aataaaggaa attatttttg ggaaaaattc gtaattagta agcctattaa
     1681 ttcaaaaaat gaagctgagg aattttatcg tagaatcggt tatttattag gatattccta
     1741 cattttaaat atttcagact tacattttga aaatttaatc tcttcaaatc ttacacctat
     1801 tttggttgat gtcgaaacaa ttttttctat ctcaccattt gatacgttgg ttggtaataa
     1861 agcaacattt catattatag aaaaaagtag agactccgta ctttccactg gtcttcttcc
     1921 aattgctgac tcagatgatg tttttggcgg ggatactagt ggagttcttg ggggaacatt
     1981 ctttggggaa gtaaaagttg ttgttaatca taatcgggat gacatccgta tcgaaaagaa
     2041 aaaatatcag ataaaaaatc aagaacattt accctatttt cttaattcag gaggagagaa
     2101 gcattatctt aatgcggtag aatatattga attcattaaa gagggattcc gagaattggg
     2161 gaattttttt gtcaaggaaa aacaatacct taaaaatctt tatttaaatc atagcgatat
     2221 tcagactaga attttatttc gaaacactaa ggattatagt ttaatacgac aattactaat
     2281 atctcccgta tactgcgata agtcgaaagt gctatttgaa aaaatgtcaa ataaactaaa
     2341 tgaatatgac tgtgatatgt taatccagtc agaaaaaaat cagctattaa acatggatat
     2401 tccatatttt agcacaagca ttaatagctg tgatattaca gatggagaga gaaaaatttg
     2461 gaaattaaaa atctcagcgt taaatacggc tcttaaaaag ttagagaggc ttagtgatga
     2521 attaattgag gaacagattg atttgataga attttcacta aaaactacac aagctttgta
     2581 tagtacagag cttcaagaag aatatagaaa atatgactgt actagtgttg atgacggtat
     2641 attaaatgaa ggtattaatg cgttagtaga tatcatcttg gatgatgaga aatattcatt
     2701 ggaagatgat agtacaaatt ggttaacttt aaaagttaat gatcacgacg cttttgaatt
     2761 agttccaatg gataattcag tatacgaagg aatcgctggc atggctattg ctttatctga
     2821 agcttatgat ttagttgatc cttctagaca agagagaatt atggattgtt tgaagcgaat
     2881 actatcaact ttattaaatt tatatactaa aatagaaaat ccaacatact tcgttggaaa
     2941 attaggagtt ttttctgcta tttctagaat tagcttgatt acaggtcaga gacttccaga
     3001 tgatatattt aaaattagag atcaatattg tttaaattta aatacatcgc aagctgattt
     3061 tttatcaagt tttccgaatg aaattgttgc attcaggaat acagacacaa atatagagaa
     3121 tctagctcaa tcactagtta aacttaaaga attaggtgtc aataacaatg attatatatg
     3181 ttggaatcga ttagaagcaa ataatgtcag ccttgcccat gggaatttag gagtagaagt
     3241 agccttgttg tttttagcat ataaatctaa tcgttcagag gccttagatc tatttaataa
     3301 ggctagaact tttgaaaatc aacaaaaact aggtgaaggc tggattgata aaaggaatgg
     3361 tgaaacaagt gcgaattggt gccacggttc tacaggggta ttagttgcaa ggttggcaca
     3421 gctgcaatta aatgataaat ataatatttt atctgattct gaggtagaag aattgagaag
     3481 agatgtagag catgctgtaa aacaaattat tgaaattggt tttgatatga ctaatttttc
     3541 gctgtgccat ggtaccagtg gaaatttatt agctctcagt tattatttaa attatatgga
     3601 gaattgccag tccaaaaaac tcaaaggtat tgtagatcga gaatacaaaa agttacattc
     3661 atttggttta gaaaaaggct ggatgtgcag ctttaataca aaatataatg tttatggctt
     3721 aatgactggg attccaggaa ttttgttttc tacagctaaa tatctaaaag aagataaatc
     3781 gcttgatatt cttattccta gcgtatgagt tacagaaagg aagaaagacg atgaagatta
     3841 ttttgcaaaa caatgaagaa gattgtcttc tagcttgtta tactatgatg ttgaatgacc
     3901 ttggacaccg aatcccttta catgaagtct gtaataaaga ttcattacca gcagatggtc
     3961 taagtttatc ttatctacta actttaaatg atagatttgg agtgactata aatgcttatc
     4021 gaacttcatt tgatgattta ttgaaaattt acgaagaaac caaaagaaga atgattattc
     4081 actggaataa cgatcatttt gtagttctag aaaaaattaa aactgaccga gtcctaattg
     4141 tagatcctgc aattggccga attagatacc ataaaagtga gtttatggaa cattattctg
     4201 gaacgatgat tatggtaaat aaaggtaacg agtttaagcc agaaagatat aaccccattt
     4261 tttggagtta ttttaagaag acacttcagg tcaaacccat ttccttattt attttatctt
     4321 tgttatttat tcaagcaagt gtactattgt tttcaataaa tttaagacaa atgctaacag
     4381 atgagttcaa attcagtgca aatttatttt tactaagttt tgttcttgtt tttcaactgc
     4441 ttggatattt tgtaaaaaat agggcgctga ataagtataa tagggatttt gacaaatatt
     4501 atagtaaaga gttatttata aggcttttaa agaagccttt gttatatttt cgcaatcatt
     4561 taagtggtgg ggtttctgaa aagattaatc taaaatcaat attaagagat aatgttacat
     4621 taaaaattat accgtcgttt ataagtttaa tttcagcctt ggtaattttt atctatttaa
     4681 tgacaatctc tgtaaaatta acagtgattt tagttgtgat gatctctgtc tatagtatat
     4741 tttcgatact gttatattat aaacaaagcg aatacaatca aacgtatttg caatatctta
     4801 tcgattttaa ttcggaatta caaaccgatt tggacgatat tgactatata aagataatga
     4861 gaaaagaaga taaaattttc aattcttggg tgacagtcaa taataaagtc acaacaaaat
     4921 actctcaaat tttgagaatt gaaaatctat ctcaattgat tggaactata tttaactaca
     4981 tcagtttatc ttctattata gttatatcag tttattacaa taactatata gaagtatcac
     5041 tttcggactt acttgtatat caaactagca tttcattatt gatttcggca attgaacagg
     5101 tgaaaggagc aattttcgaa atacttcgat tggagattta cgctgaaaag caaagtgatt
     5161 tgttgaaaga ctcagcacca attactgtac cgagttcaga atcaaacgat tatttaatac
     5221 agactgataa cttaaacttt tcttatggta ataaaccaat ctataaaaat attaatctta
     5281 cagtcaaaaa aggagaaaaa attgctattg taggaaaatc ggggagtggt aaatctacat
     5341 tactgttact tctagcaggc atgcttcgtt ataatggctc tattagatat ggaatcgtag
     5401 gatttgagga ttatataagt gtggttttac agaatatgac gcttagaaaa ggaagtattt
     5461 tagaaaatct tgaatggact tctaatgatt tatctcctct ttatcaaata ttgaaagata
     5521 cggcagcgga tgaagtaatc tctcagctac ctaacaaaat atattctaaa ttgttaaaac
     5581 aggggaaaaa tttatcaggt ggacaaattc agaaattact tatagcaaaa tcattgataa
     5641 aagataacgg cattgttttt tgggatgagg cgtttagtaa tttggatgaa cacagtaaaa
     5701 atagaattta tgaaaatgta ttacagtctt ctaggtattc ggataaaaca atgctgattg
     5761 taagtcacca tttagatatt gtgaattttg ttgacaatgt tatattcatt gatgaggagt
     5821 ctggtgaagt gattaaagat agtcataaga atctcatgga aacaaatgta aattatggaa
     5881 aatttatttg ttctagtttt taagtaaacc ccagttctct taatgttatc tttaacttgt
     5941 gacagtacaa tagtagtgaa ataaaaaaga gaggaagagc cctaagagta ggcttatatt
     6001 aggtatgtag agatgaaaaa tgtaattgaa ttgcgtagac tatcaaaagt gtataaagat
     6061 attaccacgg tagacttaga aaagattacc gtccgagagg gtgaaattta cggttttctt
     6121 ggaccaaatg gggcaggtaa aacaacaact atgaaaatga tattgtctct gattagtcct
     6181 acttcgggag aaatcatagt aactggctct aatatacaaa atggcaaagg ctatctaaaa
     6241 caaattgggt caatgattga ggaaccttct tattatccta atcttacagg ttatgaaaat
     6301 ttaatggtct ttcagaagat ggtaggattc gcaaaagaaa atatttggcc aacattagag
     6361 ttagtgggat tgtcagaaga aaaaaatcgg aaaaaacttg tgagggatta ttcacttggt
     6421 atgaaacaaa gactagcact tgcttttgcg ttggttaaga aacccaaaat tcttttactt
     6481 gatgagccga ccaatggtct tgatccagcc ggcattcatg aaattcgaga attaattgtt
     6541 aaattagcta aagaagaggg attgacagta tttatttcta gtcatattct tacagagatt
     6601 gagtatattg cagacagagt tggaattatc aatcacggac gtttggttta tgaaggagaa
     6661 atcgaagcta ttaaagctaa taggtgggtg gagattggtg gagatttttc tcagaataat
     6721 atagttcaga gtttggttga gttcggttca gtagaagtat taggtgcaac tgcaagttat
     6781 gtcaaaataa gcgatattga taatgataaa ttagcagatg tagtaagtta tttaaccaag
     6841 agtggttatc gcatttttag agtggtcaga gagagtgaaa cactagaaga tatttttcta
     6901 gagttaacca aggaggtgta gcatgagagg tatatacatt gaatggttaa aaagtaaacg
     6961 aacaaaatct ttttcaatag taactatttt gattattgtt gcgacactat ggaatatcgt
     7021 tacgtttaat tctgcattct cttcccatcc agaattaaaa ggggtagaaa ttttatttag
     7081 caatcaaaat gtcaacctcc tcatgcttcc tatagcagtt tgtgtatttg ctgctcgcat
     7141 tgtatggaat gagcgtgagg gtcagacttt taagttgcaa ttttcaaatg gtcataatct
     7201 tctaactatt tttgccaata aattcttatt tatggttatt atctttagct tcatgtcaat
     7261 tctagaagtc attgctattt gtatttttgg tcaacaagta ggcatcagaa tcccgttctc
     7321 agttatttta tttcaacttt ttgcccaatt tctttcagta tattctttga tttgtatcta
     7381 tttattctta gctatagtag tagaaaaaca gggtctatta ttggcattag gtttgttagg
     7441 tggtttttta ggcattgttt tgactccaag aagttatggc ttcagtagtt tgattaatcc
     7501 tataacagga tttggtagct tagcacccta taaatatcag tctcttggtg gcggggagtt
     7561 tgcatacatt tttgatagtc aattattttg gaagttgata atttattctg tttattgttt
     7621 attgttgtat gctatagcca atctcgtttt gagaaagaga gggaataaag atgggaagtt
     7681 attttaaggc agaatggaaa aaagctagaa aaatccaact tttgttgatt ggaatggctt
     7741 ttctgacttt ttctagtttt attgggttag gaatatattt ttctaatagg gatgttttag
     7801 ttgaaggaac acaatcactg gttttatggg gacaattaac attttataat agcaccttgc
     7861 tctatcctcc gatgcttgct attattgctg gtttactgat tatacctgaa tttgaacgaa
     7921 aaaaccttga aatgttgaaa gcaaaccaag tctcaatgtg gaaattgtat tttggtaaat
     7981 tattgtgtag ttttttcatt attcttccag ttcaactagt attattaatt atttttatta
     8041 tagcaattca tgctgatgga attattctgg atttgagttt acagacgtat attaaatggc
     8101 tattattgtc acttttagca tctgttccaa taattattct tcaatcgtat ataacagtga
     8161 aaacaagaaa tttcagtaaa agtattggaa ttgcgacagt tggaagtgta ttgaattttg
     8221 tacttatctt tatcaatgaa gatttaacaa aatttttccc ttattctcag ccaatggttg
     8281 cactccgaag tagagcatta acagatatgt cttttggtaa tttatctatt tttctggtag
     8341 taaatagtat attttctatc cttttttata aattaacagt agatgttttg gaaaaaaata
     8401 attagtttta aataaatcgc ttctatataa catacaagtc actaggcttt tataggagtt
     8461 aaaaaagagg agaggtactc ctctttttta ataatctgtt tggtccaagc tggaccattt
     8521 tccgtctttt tataatttgt acagtatact ttttcttagg agaaagctta atgtatcggc
     8581 gaataagaga tatacgagag gatcatgact taactcagca gaatgtatcc gattatctta
     8641 gtattacacg ttcagcatac gcaaagattg agcgaggtga acatacatta tcggctgaag
     8701 tgctaataca actctcgaat ctttacaacg tcagtacaga ttatttgttg gggcaaactg
     8761 actttcccca ccgaataaag aataatttaa aatagtccct cctgatttgt tcattgacaa
     8821 ttgaataatt ctaggtggga ctttatttat ttgttgagca atagaatgta atgcgccagg
     8881 aaatgagcga aaatcattta ttcaaaaata ggatggtaac ctatctgcca tgacacaaat
     8941 aatgataatg atacttctga ccgttcaggc tgccatcgta aaaggacagc gggtgaaatt
     9001 cccatgattg aactaaccat tcaaatctca tctagcgtgt aaaaaaactt agtgatttga
     9061 ggagaaaagt gtatgagaac tgctacatat aaagatttaa tgaatttagg atttcctgaa
     9121 catacctcta gagacattat tcgagaagct aaaagaattg ctgtaaaaaa gtttgaagaa
     9181 gctcgcaaag ttgaccataa tgcggtacaa ttaagtaaat cgccctttga caatcgaaga
     9241 ctaggtatcg caccagcaga aattgtggaa caattaatag ggattccact atctaaataa
     9301 catttagaaa gtgagaatcc aaatggtaac aaaaagtagt aaaaaataca aaggtgttta
     9361 ttgtgataat aagggaaaga tattttatca gattgatctt ggaatcgacc cagtaactgg
     9421 caaaagggta caaaagaaag ctagaaaaaa tcaatatggt aaaacctttg aaacaatgaa
     9481 agaagcatat gacgaattag ttcgtataaa atatgaattt gccaacaaag tcagtttaga
     9541 aaattacaat atgacttttg aaaactatat gaacaaaatt tatttaagag cgtataagca
     9601 aaaagttcag tctgtgacat ataagacggc tcttcctcat cataaacttt ttattcaata
     9661 ttttggttca aagccattaa aagcaataac tcctagagat tgcgaggctt ttagattaca
     9721 tatcatagaa aattattctg aaaactatgc gaaaaattta tggtcaaggt ttaaagcttg
     9781 tatgggttat gcagaaagac ttggctatat ttcagatatg ccttgtaaag cattagataa
     9841 tcctagaggt aagcatccag aaactccatt ttggacctat gcggagtttc agacatttgt
     9901 caaatcattt gacttacatg attatgaaga attacaacga tttactgcca tctggttata
     9961 ttatatgaca ggtgtacgag tgagtgaagg tttatcttta tgttgggaag atattgattt
    10021 tgaaaataaa tttctaaagg tacatacaac cttggagaaa gatgaaaatg gaaattggta
    10081 tcgtaaagac caaacaaaga ctccagcagg tgaacgactt attgaattgg atgatattac
    10141 tattgaagta cttcaagttt ggcgaaaaaa tcagtttgca aatcaagaga cagattttat
    10201 catttcaaga tttggagatc ctttttgtaa atcaaccatt tgtcgtatca tcaaacgtaa
    10261 agcgcagcaa gtaggagtgc ctgttataac agggaaaggt cttagacata gtcatgcttc
    10321 ttatctaata aatgttttga aaaaagatat tttatatgtg gcaagacgaa tgggacatgc
    10381 tgataaatca acaactttga acacatatag tcattggttt aatgctttag ataaaacagt
    10441 ttctgaagaa atcacacaaa atattaaaag tgcaggactg gattcaattt tatgccaaaa
    10501 ttcctgccaa acttcaaatt tatgaactca aaccccttga tactgcacat ttaacaggtt
    10561 gtgcaattgt tactcttaaa taatagagtt tccaatcaaa ataaaaacct atcacttaat
    10621 gtggtaggtt ttttcgttct attgttgcaa gcgttttcgt tgtggggtat aatataaaaa
    10681 atgctgtcta aagattagga gaaagacatg aaaagttaca aaaactatat cttcgatttt
    10741 tatggtacat tggttgacat tcgtacagat gagaataaac tagaggtctg gaatcagcta
    10801 acacagattt acaatgcttt tggttgttcc tatcgaccgc gccagttgaa aaatgcctat
    10861 catcgttttg tagaagaggc agagagatct ctcgcggaaa cagtgagtta tcagtatgtc
    10921 gaaattgatt tagaaacaat cttcattcgc ctattaacgg atgcaccaaa tgaaaaccaa
    10981 agtactaata agccgactga tttagagact tttgggcaag tagtagccac gattttccgc
    11041 gtgctttcac gtgaaaagtt agaggcttat gaaaataccc taactagtct acagacatta
    11101 aaggacagag aagcgagatt atttattctc tccaatgctc aacgaatttt tactcaggca
    11161 gaaattgaac agacaggttg tgctgatttg atggaaaaaa tttatatctc ttctgacttt
    11221 aagatgaaga agcctgaacc agcatttctt caactggttt tagaggaaaa taatcttgat
    11281 gttgaggaaa cggttatggt tggtaatgat ttgacatccg atatagctat tgctcatgaa
    11341 ttgggaatgg attccatttt gctgaatact ttcccgtata gtcaggaaga aatcgactct
    11401 tataggagac tttgttggaa ttttgaggtt gttggagata tagcggagct attgtaaata
    11461 agcgatagaa tagtaaagaa tatacataaa atatattatg taaaaaggtg aaattacttt
    11521 catttcaatg aaggtagttt tgtcttttct agccattttc tggtatacta gataggtata
    11581 aaatttagaa aggttctgtt ttgggtcatt cccaaacagt agtcagatat tctggctaga
    11641 ggtattagtt tcatgtctca aacccacatt aacgttattg gagctggctt ggctggctca
    11701 gaagctgctt atcagattgc caagcgtggc attcctgtca aactctacga gatgcgtggt
    11761 gtcaaaccaa cgccccagca caagaccgac aagtttgcgg agcttgtttg ttccaactct
    11821 ttccgtggtg atagtttgac caacgctgtc ggtcttctca aggaagaaat gcgtcgtttg
    11881 gattccatta tcatgcgagc tggtgaagcc caccgtgtgc ctgctggggg tgccatggcc
    11941 atggatcgtg agaatttctc gcaagcggtt actgatgaga ttcacaatca cccgctgatt
    12001 gaggtcattc gcggtgagat tacggacatt cctgacgatg ctattacagt tattgcgacg
    12061 gggccgttga catctgacgc cttggcggag aagattcacg cgctcaatgg tggtgacggt
    12121 ttttacttct acgatgcggc agcaccgatt gtggacagct cgaccattaa catggacttg
    12181 gtttatctca agtcccgtta cgataaggga gaggctgctt atctcaatgc tccgatgaac
    12241 aaggaacagt tcaccgcttt ctatgaggct ttgatttctg ctgaggaagc accgctcaat
    12301 tcctttgaaa aagaaaaata ctttgaaggt tgtatgccca ttgaagtcat ggcaaaacgt
    12361 ggtatcaaaa ccatgctcta tggcccaatg aagccagttg gtctggaata tccagaagat
    12421 tacaagggac ctcgtgacgg tgaatacaag accccctatg ctgttgtcca actccgtcag
    12481 gacaacgcag caggtagcct ttacaatatt gttggcttcc agactcatct caagtggggc
    12541 gagcagaagc gggtcttcca aatgattcca ggactcgaaa atgctgaatt tgtccgctac
    12601 ggcgttatgc accgcaattc ctatatggat tcgccaaact tattggaaca gacctttgcc
    12661 accaagaaaa atccaaatct tttctttgca ggtcaaatga caggagtaga aggctatgtt
    12721 gagtctgccg cttctggctt agtggccggt atcaatgctg ttcgccgttt ccgtggcgaa
    12781 gagccggtca tcttcccgca aacaacagcc atcggagctc tgccattcta catcacccac
    12841 accgaaagca agcacttcca gcctatgaat gtcaactttg gcatcattaa ggagctggac
    12901 ggtccgcgta tccgcgataa gaaggagcgt tatgaagcaa tagcagagcg ttccctcaag
    12961 gacttggaag agtttttggc ttactaagat atttagacta tcgtcagaca ccttcgggtg
    13021 tctttttctt atgttaaaat caaaaaacac tcaaacaaaa aactagtttg ttcggaaagt
    13081 ccgaaaaaat gacttgaaat aactaaattt tctgaatatt tcagaaaatc tatggtataa
    13141 tactaaaaac actgtttaga aagagatgta tatgaataaa tcctactttt atttggatat
    13201 gaaaactcat gaattagaag taccatttac aggtagaaat agacgtattc gagtcctgtt
    13261 accgaaagga tatgaggaag atacggatac aacctaccct gttgtctatt tccatgatgg
    13321 gcaaaatgta ttgtatagta aagaagcatt ttcaggtcat tcttggaaag ccattccgac
    13381 aatcaagcga aatcccgata ttgccaagat gattatcgta gcgattgaca atgatggtgc
    13441 tgaacggatg catgaatatg ccgcatggaa gtttagcgaa atggggattc caggcattca
    13501 gtttggtggc aagggaacct tatatgccga atttgtcatg gatgtggtga agccctttat
    13561 cgatcaagaa taccgtacta agtctgataa ggctcacaca gctatgattg gttcatcttt
    13621 aggtggtaat atcacacaat ttatgggatt ggcttatcaa gaccagattg gctgtctggg
    13681 tgtcttttca tcagccaact ggcttcatca agaagcattt gaccgctata ttgaacgcca
    13741 aaacttagac aaggaccaac gagtttatat ctacgttgga acagaagaag ccgatgatac
    13801 agataaaacc ttgatggcag gaaatatcaa gcaatcctat atcaattcct ctctgactta
    13861 ctatcgtcaa ttgatcgctg gcggagtgga tttggacaat atcgccttgg aagtcgtttc
    13921 aggtgcggtc catagtgaag aagcttgggc aacttatttg ccagattgct tgcgcttttt
    13981 aagtgaaaaa tggtaataga ttagaaattg ttaggagtat gaatatgcat gtagaatttt
    14041 taagtcactg gtctggaaat cttggtcgag aaatgaatct aaatcgttat ggtcacgcag
    14101 ggattcctgt ggtagttttt gcctcatcag gcggttcgta caatgaatat gctgattttg
    14161 gtatgattga agcctgtcgc ggttcgattg aggctggtca tgttcaattt ttcaccctaa
    14221 ccagtcatga taaagaaagc tggttggcgg attggaaatc catccatgac aaggcagagg
    14281 ctcaccgtgc ctatgagcgt tatgtgattg aagaggctat tccatttatc aaacacaaga
    14341 ctggttggtt tgatggtatg atgacaactg gttgctcgat gggagcttat cacgcgctca
    14401 atttcttcct ccagcatccg gatgttttca caaaagtcat cgccctttca ggtgtctatg
    14461 atgctcgttt cttcaacaac aatcaagact atggcaatga cgatgctgtt tatcagaact
    14521 caccatctga ctacatttgg aatcagaatg atggttggtt tattgacaaa taccgtcaag
    14581 cagatatcat tgtctgcaca ggcttgggcg attgggaaca agatggtctg gactcattct
    14641 acaacctaaa acgtgccttt gaagagaaga atatcccagc ttggtttgat acttggggga
    14701 cagatgtggc ccacgactgg gtgtggtgga gaaagcaaat gccattcttc cttcattcta
    14761 tcggactata agctagaaag gactgcctat gaattatctc gttatttcac ctttttatcc
    14821 agaaaatttt caaccattta ccattgaatt ggctaaaaaa gaaggtgtta ccgttctagg
    14881 tattggacaa gaaccctatg aacaattacc agaagaactc cgcaatgctt tgatagaata
    14941 tttccgtgtg gaagatttgg aaaatatcga tgaagtcaag cgtgcagcgg ctttcttgat
    15001 ttacaaacat ggtccaattg accgtgtaga atcccacaat gagcattggc ttgaaaatga
    15061 tgcagccctc cgtgagcaat ttaatatctt tggtgccaaa ccaaaacacc tgaaaaagac
    15121 taaatttaag tcagagatga aaaaattctt ctcaaaagca ggggttccag tcgttcctgg
    15181 aatggttgtc aagactgaaa aagatattga aaaagctgta aaatcaattg gcttcccaat
    15241 gattgccaag ccagataatg gagtcggcgc ttccggaacc tttaaattga caaaaaaagc
    15301 tggtatcgaa acatttaaaa atgcttggga tggtcaaaca gcctatttct ttgaaaaatt
    15361 tgttaattca agcatcatca caacctatga cggattggtt gatcatgaag ggaatgttgt
    15421 ttttgaaaca ggtttgacct atgttcatac tccgctggaa ttgatgttgt ctagaaaaga
    15481 caatgcctac ttcattgaga aggagttgga tcctcaatta gtaaaatatg gtcgtgcgat
    15541 tatcaaagcc ttcggtatga aagaacgttt cttccacatt gaattcttca aagatggtaa
    15601 agactatatc gccattgaat acaataaccg tatggcaggc ggtttcactg tagaagctta
    15661 caactatgct tattcgattg accttttccg tgactatgcc aatgtggtaa ctggtgctac
    15721 agttgaggaa cgtcgatttg agcctcaata ctgcttggtc gcaactcgcc gtgatacgac
    15781 tgaatatgtt cactcagcag atgacattca tcagacattc gctggtaaga ttaagacagt
    15841 caaacgcatg ccagatgcct ttgcggaact tcagggaaat gatgcctatc tacttgtaac
    15901 ggaaagcaag aaagagttag atgaaatgat tgcctacatt ggtctaacaa aataaaacta
    15961 actgtaagac gccagaaatg gtgtcttttt ttcttacaaa cctgtaagtt ttcagttcag
    16021 aactgtaagg gagtgtgata gaactatttt ctataataga cttataagaa acagaaagaa
    16081 ggaaatcata tgtcattcaa atttttacaa gccaagaaaa tggaagaagt ggtattctca
    16141 gaaaaagaaa aggctgaact cttggaacag gcagaattct tagaggagtt atcccataat
    16201 ttgcaaagta tgcgatttat ggcatactag agggaggaaa ctatgaaaaa gaaagtattt
    16261 ggcttgctgg ctttgggcag tataatgcta accgcttgct cttcctcttc agcaggtctt
    16321 agctttgatg agggctatca aactttccat tacaagggaa aagactatgc cgttagcaaa
    16381 caggaagttg ccgaagatag cattcgaggg acagaagcca agtttatgga atggcccgtt
    16441 gtcaaagaag agagttctgt caaagaaaca gtttccttga ataatcttta cactacttct
    16501 aacaaggaat gggccatcgg tgtccagggt ggttattata aggtggattt agaagataat
    16561 attgctgaat cagaccgaat cgactatcaa gcagttcttg accaagttga tttagacagt
    16621 gaataaggaa ttaggagtaa ctatgttatt agaaatcaat catttagaaa aagtttaccg
    16681 cacgcgcttt tcaaaagagg aaactcgtgc cttgcaagat gtggatttta aggtagaaga
    16741 gggcgagttt atcgctatca tgggggaaag tggttcaggt aagacgactt tgctcaatat
    16801 tctagcaacc ctggacaagc cgacgagggg ctctgttatc ttaaacaatc aagacatcac
    16861 caaaatcaag gaaagcaagc tggcggattt ccgtttgcgt aacctaggtt ttgttttcca
    16921 agattttaat ctcttggata ccctgtccat ccaagataat atctttttac cactggtttt
    16981 ggctcgcgct agtcatcaag aaatggagaa aggtttgaaa gctctggcgc caaaactgcg
    17041 gattcaagat ttgctgaaaa aacgtccctt tgaactatct ggtggacaga agcagcgcgt
    17101 ggccattgcc cgtagtttga ttacccagcc acagattgtc ctagcagacg aaccgacggc
    17161 tgccctagat taccgcaatt cagaagactt actgaatttg tttgaagaca tcaaccgtga
    17221 cggtcaaacc attctcatgg taactcactc ggccaacgcc gccagccatg ccaaacgcgt
    17281 cctcttcatc aaggatggtc ggattttcca ccaattgtac aaggcaggta agagcaatca
    17341 agactttgcc aaggagattt cgctcaatat gtctgcactt ttagggggtg agtagatgtt
    17401 ttacctcaaa cttgctgggc aaaatatccg aaaatccatg ggtgtttttg ctcccttcgt
    17461 tttagccagt cttgtgctat ttactctgat ttgttccatg ttcttgctca tgctgagtcc
    17521 agttatgaag accatgggct caggtgccat ttctatcggt cttggtgttg ttgttctgac
    17581 cattttctcg gtcattatgg agatttatag ttttaatttc ttgatgaaac aacgggcgag
    17641 agaatttggt ctctataaca tgctggggat gaacaagaaa aaagtagcct tgatagccag
    17701 cctcgaattg ataatgattt tcttgctagt tgtggttctt ggttctgtct tagctggtgt
    17761 gtttgccaat gttctctact tgatttttgt gaatttgacc aattatagtg acttacactt
    17821 tagtatttca cctctggcat ttgccatgac cgcctctctc tttgctggta tcttctttct
    17881 cttggaattg ctagctattc ggaccattgg caagaccagt ccactgattt tgttccgagc
    17941 tagtgaaaaa ggggagaagg agccgcgtgg gaatttcctc ttggcagcac tcggtgtact
    18001 tagcctaggg gttggttact acctatcact ttcttctcaa tctgcaggag ttggcgtcat
    18061 cattcgtttc ttcatcgctg tgctctttgt catcgcgggg acctacttgt tctacatcag
    18121 ctttatgact tggtatttga aggctcgtcg gaaaaacaaa cgctattttt acacgccaga
    18181 gcatttcatt accacgtcgc agatgatttt ccgtatgaaa cagcatgcaa ctggtttggc
    18241 aaatattacc ctcttagcag tcatggcctt tgtgaccatt gcaacaacga cttcacttta
    18301 tactggcatg tcaagcatga caagtggtct ttatccaaag gaaacatcta ttacctacaa
    18361 agttgcggat agaagtcagg gtgaaagtgc ctatcagcaa tcggtgctca gccattttcc
    18421 agaaaaagcg gaagatagtc tgtcctacct gacctaccaa gctggtctgg tctatgacgg
    18481 tgggaaggag attgtcatta gtccagaaac cattgccaat ccagacttta gcaaaatagc
    18541 ctttacctac ttcgtcaccc aagatgattt ccggaagttg ggcaatgacc tgccagagct
    18601 ggctgccaat caagttgcct ttatccgtcc aagtgaaatg ccgttgctag agaaagtcac
    18661 tttgggagat agtactttcg agaatgtagt aaatcttgat acagctattt tccctgatat
    18721 tactaatacg ctcaatgctg ccgttatggt agtcagtgat gatactgtgt tggatgctgt
    18781 acgtgagtat tacgaatcca ataatccgca aggctctctt gttagtctag actaccgtgt
    18841 ctttactgac ttgactgatg aagaagtagc aaaagttggt gaacaggcag gtgataccta
    18901 taatatcagc gatgctaatg gagaatcttt tggttacgcc atgcagaaaa cagatttcaa
    18961 taatatgctc atgggcctca gaggcggttt cctctttaca ggtttcttgt tgggtattag
    19021 tttcttgcta ggtgctgcct tgattattta ctacaagcag tactcggaag ggcatgaaga
    19081 caagaaatcc tacaagattc tacaagaagt gggcatgagt gcagcagcgg tcaaaaagac
    19141 cattaactcg caaacactta cggtcttctt tatgccacta gctatggcga ccttgcattt
    19201 cgtgatttct cttgttatgc ttaagcaaat gctattgacc ttgggtgtca cctcttcgct
    19261 tatgatttat accgtcagcg gaattaccct actggcagtc gctctgattt actttgtcat
    19321 ttacaagtgg actagtcgca cctattaccg cattattgaa cggtagaaga agtctcgcct
    19381 tgtgcgagat ttcttgcatt ttcagggaaa tggtgttaca atggtaatac caaaggaata
    19441 ctataagagg taagaaaaat ggcagctatc acattgaaag tttctgagca ggacaagctc
    19501 tttatgcagg ctatggcaaa gtttgaaggt gtcagcttgt cagaactcat tcggactaaa
    19561 acccttgaag cccttgaaga tgagtacgac gcccgtgtgg cagacatcgc tctggctgaa
    19621 tacgaggctg acttggcgaa aggcattgag ccgattagct gggaggaaat gttggaagag
    19681 ttggggttga cggatgaaga cctgttataa actcgtacca accagtcgtt ttatcaaaca
    19741 attgaaaaag ttggacaaat ttacccaaaa acagattacc aactacctgt ccagtcatgt
    19801 gactgacaat cccagacaat acggaaaagc cttgactgcc aatcgttctg gtcaatggcg
    19861 gtaccgtatc ggtaattaca gggtcatcgt cagcattgag gatgataaat tgatcgtaac
    19921 agcccttgaa gtcgggcatc ggaaagaaat atataaatag aaagccaaga cctgtgtcct
    19981 ggcttttgca gaatgaagat gatgaaaaaa gagaagattt atattgttga agacgatgag
    20041 atgattgtcc agctcttgaa gcaacacctt ggcaaatctt atcaggtaga aagtgtgcag
    20101 aatttccgag ctgtcagtca ggaagtggcg gaaatcaaac cagacttggt gctgatggac
    20161 attagcctgc cttattacaa cggtttttac tggacgactg aaatccgtaa aaccatgacc
    20221 atgccgatta tctttatctc ttctagcgat gatgagatga atgcagttat ggctatgaac
    20281 atgggtggtg atgattttgt gtcaaagcct ttttcactgg gaattttgga tgccaaaatc
    20341 ggagccttct tgcgtcgggt taatcaattc agcaaatcga gcgaattgtc tatcgaccag
    20401 ttccagctta gtttagacgg acgatttaca aacaaatcgg aacaggttca actttcacct
    20461 acggaaacca agattttgtc cgccttgcta gaaagacaag ggcagattgt cagcaaggaa
    20521 gaacttttgg aaaaactctg ggaaaatgaa gaatttatcg accagaacac gctcaatgta
    20581 aacatgacca gactgcgtaa gaaggtgagc gaggtcggtt ttgaacgtat ccatacggtt
    20641 cgtggtgtgg ggtacttggt caaatgataa caaaatttat ccgtgaatac cggagttttt
    20701 atttctcata cattgttttg tctggaagtt ttatcttgct tttctatctc taccaattgc
    20761 ccagcgaatt tctgcaaaac gctttgctat tgtccctaac ccttatcatc ctactgacag
    20821 taggcctgtt ctggaagttt cgcaaccgca tgagagcctt ggaagactat gtccatgaag
    20881 aagcactgcc cctgcttaat aagcctgtgg accttgccta tctcaacttg attgaagcgg
    20941 agaaggaggc gacgcgggag cagcttttgg aatataagtc acgggaagag gacctgcaag
    21001 ctatggtcaa aatgtggtcc caccagatga aagtgccact ggctgccctg tctttgatga
    21061 gccagactga caatctcaac cagcaggatg tcgatcacca gctcttacgc ttggacaact
    21121 acatggccaa tctcctcaac tacctcaaac tgaccaacca tgccagtgat tttcgatttg
    21181 agcaggtgga agtaagagaa gtggtggtgg atttggtcaa aaaataccgc aatcagttct
    21241 tacaaaaaga catttcagtg accatcgatg gaaattggct actgaagacc gacagaaagt
    21301 ggcttagttt tgccctatca cagataatcg acaacgccct caagtacaat aagactggtg
    21361 gtaaggtagc cattgaactg aataatggaa tttccatttc cgatacggga attgggattc
    21421 tggcagaaga cattccacgc ctgtttgacg aaggttttac aggttttaat ggccgtgaac
    21481 accaaaaagc gacaggattt ggactttatt tgacaaagcg tgttttaaat caattagaat
    21541 taggtattaa tgtggaaagt cgagtagacg tcggcaccac cgtaaccatc accaaagtac
    21601 agtagaagct gt
//
LOCUS       DASFQS010000030        21370 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.030, whole genome shotgun sequence.
ACCESSION   DASFQS010000030 DASFQS010000000
VERSION     DASFQS010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 21370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21370
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.030"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            277..894
                     /locus_tag="U1041_000960"
     CDS             277..894
                     /locus_tag="U1041_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM4768080.1"
                     /translation="MSQDKWLEWAVRLQALAQTGLAYGKDVYDMERFEEIRQIAAEML
                     VEPSGQPLEVVKDLFCNETGYQTPKLDTRAAIFQEDKILLVQENDGLWSLPGGWCDVD
                     QSVKDNVVKEVKEEAGLDVEALRVVAILDKHKNNPAKSAHRVIKVFVLCRLLGGEFQP
                     NLETVASGFFSLDDLPPLSLGKNTAEQLALCLEASRSEHWETRFD"
     gene            904..1677
                     /locus_tag="U1041_000961"
     CDS             904..1677
                     /locus_tag="U1041_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HEM4768081.1"
                     /translation="MTYTGYLIDLDGTIYEGKKRIPAGERFIHRLQERQIPYLFVTNN
                     TTRRPETVQAMLAEHFNIETPLETIYTASLATVDYMNDLGKEKTVYVIGEDGLKSAIF
                     EAGYVEDTENPAYVVVGLDTQLTYEKLTIATLAIQKGATFIGTNPDLNIPTERGHLPG
                     AGSLIALLKAATRVEPTFIGKPEAIIMDKALEILGTERSQTVMVGDNYLTDIRAGIDN
                     GFPTLLVLTGFTKPEEVADLPLAPTHVLNSLDEWSFDEN"
     gene            1667..2296
                     /locus_tag="U1041_000962"
     CDS             1667..2296
                     /locus_tag="U1041_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01906 family membrane protein"
                     /protein_id="HEM4768082.1"
                     /translation="MRTKLQIIGTILFVLSAAVLGTIYLAWLVYPLEISFLGLEKVVY
                     MKAADISYNFNILMNYLTNPFASVLDMPNFSSSADGLKHFADVKHLFHLAQVVFLISL
                     PAVFYFWKEVVRKGYGKLYQAVFLWMAAVPVFIAVLGLLIGFDSFFTLFHQVLFPGDS
                     TWLFNPSTDPVIYILPAEFFLHCFLLFFVLYEIICGAWLLLLRKKGKKS"
     gene            2376..2552
                     /locus_tag="U1041_000963"
     CDS             2376..2552
                     /locus_tag="U1041_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEM4768083.1"
                     /translation="MSKTVVRKNESLDDALRRFKRAVTKAGTLQETRKREFYEKPSVK
                     RKRKSEAARKRKKF"
     gene            2657..3670
                     /gene="galE"
                     /locus_tag="U1041_000964"
     CDS             2657..3670
                     /gene="galE"
                     /locus_tag="U1041_000964"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEM4768084.1"
                     /translation="MSILVTGGAGYIGSHTVVELLKLGKEVVIVDNLSNSSILVLDRI
                     ETITGKRPTFYELDVADKEALRQVFENENIEAAIHFAGYKAVGESVAKPIMYYENNIM
                     STLALVEVMAEFSVKKIVFSSSATVYGLNNPSPLVETMPTSATNPYGYTKVMLEQILR
                     DVEVADKGWSIALLRYFNPIGAHESGLIGEDPAGIPNNLMPFIAQVAVGKRPELSVFG
                     NDYDTVDGTGVRDYIHVIDLALGHIKALEKISTTTGVHTYNLGSGQGTSVLELVQAFE
                     KVNGVPVPYKIVDRRPGDVATCYANADKAWKELNWKTEKTIEDMCRDTWNWQSKNPNG
                     YEG"
     gene            complement(3744..4109)
                     /gene="mscL"
                     /locus_tag="U1041_000965"
     CDS             complement(3744..4109)
                     /gene="mscL"
                     /locus_tag="U1041_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEM4768085.1"
                     /translation="MLKDLKAFLFRGNVIDLAVGVIIASAFGAIVKSLVEDVITPLFL
                     TPALKTAGAEKIADLSWNGVAYGNFLSAVINFLIIGTSMFFVVKAAEKAMPKKVEEPA
                     PAGPTQEELLAEIRDLLKK"
     gene            4291..6081
                     /gene="dnaG"
                     /locus_tag="U1041_000966"
     CDS             4291..6081
                     /gene="dnaG"
                     /locus_tag="U1041_000966"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM4768086.1"
                     /translation="MLSKDKITEIKQALNIVDVIGETVALTKAGRNYVGLCPFHGEKT
                     PSFNVIEDKQFYHCFGCGKSGDVFKFVEDVRGVSFADAAAILAEKAGFQVDVTPSYHQ
                     EEKRVSPHQVLYDIHRDAAKFYHALLMTTKMGEKARAYLHQRGLTDDVIKTFQLGLAP
                     AEQNILYQKLSGQYDEESLLNSGLFNPSENNIIYDAFQARIIFPLADEYGRIVAFSGR
                     IWTEEDRNNKQLAKYKNSRSTAIFNKSYELYHLDKAKAVIKKQREAYLMEGFLDVIAA
                     HRVGIDNAVASMGTALTREHVAHLAKFCKKIVLTYDGDKAGQAATMKALDELQDFQVE
                     IVSLPDNMDPDEFLQKNSEEALQQVLTKSRISDVEFLIQYLKPENPDNLQMQIEFVDK
                     ITPIIAKVSSITAQNSYIYKVADLLSDFDYNQVEQAVNAVRLNQRQERTQQVFQSQTG
                     QSYLPPVQTIARITSLIRTENHLLYRMVEHPYILNEFRLREDFYFATPELQAIYDMLK
                     KSGEITSFELSQLNDSAQQAWYRMQEERLPNEVSPHEIEELEIRRDKELLNKENQHLA
                     RKIREHSHVGNADIALDELQKLLDRRRQME"
     gene            6084..7202
                     /gene="rpoD"
                     /locus_tag="U1041_000967"
     CDS             6084..7202
                     /gene="rpoD"
                     /locus_tag="U1041_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEM4768087.1"
                     /translation="MTNKKDKKTEVTTFDVQVAEFIRNHKKQGSATDDEINDQLVIPF
                     TLDADGIDDLLQRIQDAGISIVDKDGNPSARAMQVEEEPGLSDEELLGSTSAKVNDPV
                     RMYLKEIGVVPLLTNEEEQELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQF
                     LDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVET
                     INKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDS
                     HLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLED
                     VGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED"
     gene            7651..7974
                     /locus_tag="U1041_000968"
     CDS             7651..7974
                     /locus_tag="U1041_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HEM4768088.1"
                     /translation="MTYTDDQIKDIQERIFHALEDVIDPELGIDIINLGLIYEIRFIE
                     GKAEIDMTLTTMGCPLADLITDQIHDVLKDVPEVTEVDVRLVWSPAWTVQKMSRYARI
                     ALGIK"
     gene            8601..9132
                     /gene="tnpA"
                     /locus_tag="U1041_000969"
                     /pseudo
     CDS             8601..9132
                     /gene="tnpA"
                     /locus_tag="U1041_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775157.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            complement(9276..9869)
                     /locus_tag="U1041_000970"
     CDS             complement(9276..9869)
                     /locus_tag="U1041_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEM4768089.1"
                     /translation="MYKFWQKTIQVLSVLTLIGTAIFLFWLYKIGILNDQNVLSDLIK
                     SQGALGSLSFLAIQIIQVVFPIIPGGVTTVVGFLVFHFWWGFFLNYLGISIGSIILFW
                     LARRYGKKFCLLFMSEDTFYKYESKIDNKRSYEIFFVLCMLSPISPADIVVMITGLTS
                     MSYRKFIMITLLCRPFSVVAYSFFWIYGSQWLQQLLG"
     gene            9978..10325
                     /gene="ssrA"
                     /locus_tag="U1041_000971"
     tmRNA           9978..10325
                     /gene="ssrA"
                     /locus_tag="U1041_000971"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            10328..10415
                     /locus_tag="U1041_000972"
     tRNA            10328..10415
                     /locus_tag="U1041_000972"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10362..10364,aa:Ser,seq:gga)
     gene            10525..11571
                     /locus_tag="U1041_000973"
     CDS             10525..11571
                     /locus_tag="U1041_000973"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEM4768090.1"
                     /translation="MIVNNLLTKEEVLMLNVQELAKTELHCHLDGSLSLSAIRQLAQL
                     AEISIPDKDEELRKLVSIEGKVDSLMTYLKTFDFIRPLLQTPEALELAAYDVLGQASE
                     DGVLYIELRFAPELSTDQDLTILEAVSAVLVGLNRGQEDFGVVAKLLVCGLKQTNTNQ
                     TKELFSAIADLAPKGLAGFDFAGNEADNPTHVLAELIDYTQSLGYPMTFHAGECGCVT
                     NVAQALTLGIKRIGHGTALSGHAEAIQAFVNSGATLEMCLTSNLQTGAAQTLADFPYE
                     QLVQAGAKITINTDNRTVSNTNLNKEYQLFIEYFGTTKEEFYQFNRNAIQASFASEEE
                     KANLLDVLAQKYNL"
     gene            complement(11619..12401)
                     /locus_tag="U1041_000974"
     CDS             complement(11619..12401)
                     /locus_tag="U1041_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768091.1"
                     /translation="MFKKLLKYEFQSVGKWYLGIYAGALVLSAILGFWLQALTLRAQA
                     GSTEPGGAEMVLFGTSFMTFGILIAALGLSTFFMVINRFRKNVYGRQGYLTMTLPVNS
                     HQIILSKLLASLVWYLLAGITIILSIGIVLAVLMLGSEEFVIPELQTLIQQIDWSVVF
                     AHLFYSLIESTMGILLIYFSISVGQLFKDHRLLFAILTYFGISIVLGVFGALIFTNYL
                     ENLYNAALPLYPSPILALINIILAFAYYFGTHFIMTKKLNLQ"
     gene            complement(12418..13125)
                     /locus_tag="U1041_000975"
     CDS             complement(12418..13125)
                     /locus_tag="U1041_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768092.1"
                     /translation="MNNAYTLVELQQVSKSYGGAVALNNVNLKLTAGKIIGLLGPNGS
                     GKTTLIKLINGLLQPEYGQVLINGRTPSPETKAIVSYLPDTTYLDENMKVSDAITFFT
                     DFYADFDKERALHLLQDLGIDLNSRMKHLSKGNKEKVQLILVMSRQAQLYVLDEPIGG
                     VDPAARDYILKTIVNNYSPTASVIISTHLISDVEQILDEVIFLQYGSVIRHENVDDLR
                     IESGESIDELFRQDFKA"
     gene            complement(13118..13492)
                     /locus_tag="U1041_000976"
     CDS             complement(13118..13492)
                     /locus_tag="U1041_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4768093.1"
                     /translation="MAWKFDNNMPIYIQISNTIKLQIVTNQLKSGDKLPTVRDLAEIA
                     GVNPNTVQRALSDLETEGFVYSVRTTGRFVTDNQELISQTRLHLAQKELENFVTNMLD
                     LGFNQDELTHQLDDYLKGVSYE"
     gene            13645..16755
                     /locus_tag="U1041_000977"
     CDS             13645..16755
                     /locus_tag="U1041_000977"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEM4768094.1"
                     /translation="MLAQLDTKTVYTFMDSMVTIENYVGKAKELGYHALGIMDKNSLY
                     AAYSFMESCNKMGLQPIIGCELDWKLQGGEQNVTTQLIALTTRGYRNLLKISTAKMTG
                     QDDFETIRQYLVDIAVVVPYFSGIEHLELGVNYYIGVTVDTPVQDFKQAILPIHTVRF
                     FEEEQLESLQVLHAIRDNIPLNQVADIDSRQKLLSADSLTNLFSNRFPQAVDNLRDLV
                     AGISYQLNTDLKLPRFNRDRPAVEELYERSYQGLEEKGLTNSLYKERLEKELSIIHQM
                     GFDDYFLIVWDLLRFGRSQGYYMGMGRGSAVGSLVAYALNITGIDPVKHNLLFERFLN
                     AERYSMPDIDIDIPDIHRADFIRYVRDRYGSTHAAQIVTYSTFGAKQAIRDVFKRFGT
                     PEYELSNITKKISFRDSLTSAYQRNAAFRQIINSKIEYQKAFAITQQIEGQPRQTSIH
                     AAGIVMSDEDLTDTIPLKIGDDMLVTQYDAHAVEANGLLKMDFLGLRNLTFVQKMAEG
                     VRERYQQEIDIAKIDLEDKKTLELFAAGRTKGIFQFEQPGAISLLRRVKPGRFEDIVA
                     TTSLNRPGASDYSDNFVKRKHGQETVDLLDPTIAPILQPTYGIMLYQEQVMQIAQVYA
                     GFTLGKADLLRRAMSKKNAQEMQAMEAEFLQGALKNGHAEENAREIFGMMAKFAGYGF
                     NRSHAYAYSALAFQMAYFKSHYTDVFFDVMLNHSSSAYIEDAMQFDFEVARLTINNIP
                     YHDKFDKSKVYLGLKTLKGLPKDLALWILDHRPYKSVEDFILRLPDNFKKKDLLIPLI
                     QIGLFDDFDANRKKIIENLDNLFVFAEAIGTFFAEESYSWTDAEDYSDSEKFMLEQEL
                     LGVGISPHPLVNICRESKRSFTDLADLAVGNRATVLVQIQAIRLIRTKKTGEQMAFLR
                     VTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQERDGQLQLVLEKLEPVSLEKF
                     WILLENREHDYAVARILDKYRGSIPVVLHYQDSNQTIQAEHHMVMKTPQLEEELSEFV
                     MKTIFR"
     gene            16840..17850
                     /gene="pfkA"
                     /locus_tag="U1041_000978"
     CDS             16840..17850
                     /gene="pfkA"
                     /locus_tag="U1041_000978"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HEM4768095.1"
                     /translation="MKRIAVLTSGGDAPGMNAAIRAVVRQAISEGMEVYGINEGYAGM
                     VAGDIHELSARSVGDIISRGGTFLGSARYPEFAKLEGQLKGIEQLKKHGIEGVVVIGG
                     DGSYHGAMRLTEHGFPAIGVPGTIDNDIVGTDFTIGFDTAVTTAMDAIDKIRDTSSSH
                     RRTFVVEVMGRHAGDIALWAGIASGADVIVVPEEDFNINDIVNRIKAGYDNGKKHSII
                     VLAEGVMPAAQFAEELKAAGDTSDLRVTELGHIQRGGSPTARDRVLASRMGAHAVKLL
                     KEGRGGLAVGIRNEQMVENPILGTAEEGALFSLTAEGKIVVNNPHKADLDLAELNRNL
                     SI"
     gene            17917..19422
                     /gene="pyk"
                     /locus_tag="U1041_000979"
     CDS             17917..19422
                     /gene="pyk"
                     /locus_tag="U1041_000979"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEM4768096.1"
                     /translation="MNKRVKIVATLGPAVEIRGGKKFGDDGYWGESLDVEASAQKIAQ
                     LITEGANVFRFNFSHGDHQEQGERMATVRRAEEIAGKKVGFLLDTKGPEIRTELFEDD
                     AKEFSYTTGEKIRVATKQGIKSTREVIALNVAGGLDVFDDVEVGKQVLVDDGKLGLKV
                     IEKDAEKREFIVEVENDGVIAKQKAVNIPYTKIPFPALADRDNADIRFGLEQGLNFIA
                     ISFVRSAKDVEEVRNILKETGNEHVQLFSKIENQQGIDNIDEIIEASDGIMIARGDMG
                     IEVPFEMVPVYQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGT
                     DATMLSGESANGKYPVESVRTMATIAKNAQTLLNEYGRLNSDHFNRASKTEVIASAVK
                     DACHSMNIKLVVTVTETGYSARSISKYRPDADILAVTFTEKVQKSLMLNWGVIPVVTN
                     RPDSTDDMFDLAERIAKEQGLVEAGDDIVIVAGVPVGVAGSTNTMRVRTVK"
     gene            19557..>21370
                     /locus_tag="U1041_000980"
     CDS             19557..>21370
                     /locus_tag="U1041_000980"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF020596.1"
                     /note="This family includes IgM or IgG-cleaving cysteine
                     proteases; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IdeS/Mac family cysteine endopeptidase"
                     /protein_id="HEM4768097.1"
                     /translation="MDIHIRFSLRKLAVGLVPVTFLFLANQSVLSAQAETISSLEEET
                     SLLEGDLVPQSLEIINVEEQGEKNNSEFTGLNILVESDNLAQGSENEVGPSELKNELL
                     EVKIDNLFESTSIEIHADMEEKVIPEHEDSSLPSNLPVAVQKDMVEQPISLYTSEDGQ
                     YREIIWAQGITPPSMGQGGDFKKEVTGEFIEYTVPYEAGKGYYDANKSLDASLEDLNL
                     CFAAVSSNMLHWWLEQNKEYVERYISEKYGADLGQQDYSLTDIRRYTDSFENQQNSRI
                     FNLFKAYYGRRLNGFVSDALVDLFINGYPPKSQGGVNLENPDLVPDKRGGFFHEVFKE
                     KMLTDRMFSGDYLYFGNLVRNNLENQGLLGLTYRTFGTTTHIVTVWGAEYDDKGLIRA
                     VYITDSDDQHDPIGLKRMGITRDSSGNPRLNNNIVKNSVGSYLDYVHTINLGRKHWET
                     YFNGLEDEKQTARQKLSEAKFGLLHAIHAQEEFSDKEERSYLALIEEKYFEGLKQINQ
                     AMAKQELSEILQSALQSLRIPMKSVGQALAYDRPFGNLIVHGNSVRHDLPLGHLSIHG
                     DSVRYDLPLGHLSIHGDSVKYDLPLGHLSLHGSSVTHE"
BASE COUNT         6580 a         3877 c         4736 g         6177 t
ORIGIN      
        1 gaaagtgact tgcttcgcag gtcttatttc caacctagaa cagcctttac gctgttctag
       61 caacctgcac ctcagttcct tgtctgaaag ctaattcatt tgactataat ggttctttgt
      121 caactgtagc ggtggatatt actcactaca gaaattatag agcctttctt catgcgtatg
      181 acctgtcgta tacagctggt ttctttctcg ctgattcggt ttgtggtata atgttgatta
      241 ttaagcaagt taggtaaaca ttgaatggag aatgtcatgt cgcaggataa gtggttggaa
      301 tgggccgtac gtttacaagc tttggctcag acaggcttgg cctatggaaa agatgtttat
      361 gatatggaac gatttgagga aatccgtcag attgcagcgg aaatgttggt agagccatct
      421 ggacagccct tggaggtggt gaaagacttg ttttgcaatg aaacaggcta tcagacaccc
      481 aagctggata cccgcgcagc tattttccaa gaggataaaa tcctactggt ccaggaaaac
      541 gacgggctct ggtccttacc aggtggttgg tgcgatgtgg accagtccgt caaggacaat
      601 gttgtcaagg aagtaaagga agaagcgggg ctggatgtgg aggctctacg agtcgtggcg
      661 attttggaca agcacaagaa caatcctgcc aagtcagctc accgcgtgat caaggtcttt
      721 gttctatgtc gtcttcttgg cggagagttt caacccaact tggaaacagt cgccagcggc
      781 tttttcagct tagacgattt accgccactt tcacttggga aaaatacagc tgagcagtta
      841 gccctttgct tggaagctag tcggtctgag cattgggaaa cacgatttga ttaaggagga
      901 aaaatgacat atacaggtta tttgattgat ttggatggta ccatttatga agggaaaaag
      961 cggattcctg ctggtgaacg ttttattcat cgcttgcaag aacgtcagat tccctattta
     1021 ttcgtgacca acaataccac acgccgtcct gaaacggtac aggctatgtt ggcggagcat
     1081 tttaatatcg agacaccgct tgaaacaatc tatacagcca gtctggcgac agtagattat
     1141 atgaatgact tgggcaagga aaaaactgtc tatgttattg gagaagacgg gctcaagtct
     1201 gccatttttg aggcaggtta tgtggaagat acggaaaatc cagcctatgt tgttgtcggt
     1261 ttggatactc agttgaccta tgaaaaactg accattgcca ccttggccat tcaaaaggga
     1321 gcgactttta tcggtaccaa tcctgacttg aacattccga ctgaaagagg tcatttgcca
     1381 ggagcaggct cactgattgc gcttttgaaa gctgctaccc gagtagagcc gacctttatc
     1441 ggtaagcctg aagccattat catggacaag gctctggaga ttttaggcac agaacgcagc
     1501 caaacggtta tggtgggaga taactacctg acggatattc gtgcaggaat cgacaatgga
     1561 tttccaactc ttttagtcct gactggattt accaagccag aagaagtagc agacttaccc
     1621 ctggctccaa cccatgtcct caacagccta gatgaatgga gttttgatga gaactaagtt
     1681 acagattatc ggaacgattt tatttgtctt atcggcagca gttctaggaa ccatctacct
     1741 agcttggcta gtttatccgc ttgagatttc ttttttgggg ttggaaaaag tggtctacat
     1801 gaaagcggcg gatatttcct ataattttaa tatcttgatg aactatctga ccaatccttt
     1861 tgcaagtgtt ttagacatgc caaatttttc atcatcagca gatggtctga aacattttgc
     1921 ggatgtcaag catctctttc atctggctca ggttgttttc ctgattagtt tgcctgcggt
     1981 tttctatttt tggaaagaag tggtgcgaaa aggatatgga aaattgtatc aagccgtctt
     2041 tctatggatg gcagcagtac ccgtattcat tgctgtacta ggtttgttga ttggtttcga
     2101 ttctttcttt actctctttc atcaagttct ttttcctggt gactcgacct ggctcttcaa
     2161 cccaagtacg gacccggtta tctacatctt accagcagaa ttcttcctgc attgttttct
     2221 cctattcttt gtcttgtatg aaatcatctg tggagcttgg ctattgctcc taaggaaaaa
     2281 ggggaaaaag tcgtgattat gtaaaaaagt tcttgacaat ccttttgatt gcagttataa
     2341 tagtatgtaa tttgaaattg aggggagtga aaaaaatgtc aaaaacagta gtacgcaaga
     2401 acgaatcact tgatgatgct cttcgtcgtt tcaaacgtgc ggttactaaa gctggtactc
     2461 ttcaagaaac acgcaaacgc gaattctacg aaaaaccatc tgtaaaacgt aaacgtaaat
     2521 cagaagcagc tcgcaagcgt aaaaaattct aattgaattt gaaaacggcc gaaaggctgt
     2581 tttttgttta cattttacaa caagtaacat ataataggga tatagaattt ttgtctaagt
     2641 gaaaaggagt aaagagatga gtatcttagt tactggtggt gcaggttata ttggtagtca
     2701 tacggttgtc gaattgttga agttggggaa agaagtggtt atcgtggata atctttcaaa
     2761 ctcaagtatt ttggttttag atcgcattga aaccatcact ggcaagcgcc caactttcta
     2821 tgagttggac gtggcagata aggaagcctt gcgccaagtt tttgaaaatg aaaacattga
     2881 ggcagccatt cactttgctg gctacaaggc agtcggtgag tccgtagcta agccaattat
     2941 gtactatgaa aacaatatca tgtcaaccct agctttggtg gaagtcatgg cagaatttag
     3001 tgttaagaaa attgtcttct cctcaagtgc gactgtttat ggcctcaata atccatcgcc
     3061 tttggttgaa actatgccaa ctagcgcaac gaatccgtac ggctatacca aagttatgtt
     3121 ggaacaaatc ttgcgtgatg tggaagtagc agacaagggg tggagtattg cccttctccg
     3181 ttatttcaac ccaatcggtg cccatgaatc tggcttgatt ggggaagatc cggctggtat
     3241 tcctaataat ttgatgccgt ttattgcaca ggtagcagtt ggtaaacgtc cagaactcag
     3301 cgtttttggt aatgattatg acacagttga tggaacaggt gttcgtgatt atattcacgt
     3361 cattgactta gcgctcggtc atattaaggc gcttgaaaaa atttcaacta ctacaggtgt
     3421 acatacttac aatcttggtt ctggtcaagg aactagtgta ctggaattgg ttcaagcctt
     3481 tgaaaaagtc aatggcgtgc cggtacctta taaaatcgtt gatcgtcgtc caggtgatgt
     3541 ggcaacctgt tacgccaacg cagacaaggc ttggaaagag ttgaactgga aaacagaaaa
     3601 aacaattgaa gacatgtgtc gagatacgtg gaactggcaa tcgaaaaatc caaatggata
     3661 cgaaggataa gaaaagatgc gggtagagta cctgcatctt ctatttttat gaacaaaaaa
     3721 caagcactag acctgctaaa atattatttt ttcaacaaat cgcggatttc tgcaagcaac
     3781 tcttcttgag ttggtccagc tggagctggc tcttcaacct tcttaggcat tgctttctca
     3841 gctgctttaa caacgaagaa cattgaagtt ccgataatca agaagttgat aacagcactc
     3901 aagaagttac cgtatgctac accgttccat gacaagtcag cgattttttc tgcaccagca
     3961 gttttcaaag ctggcgtcaa gaacaatgga gtaattacat cttcaaccaa tgatttaacg
     4021 attgcaccaa atgcagatgc aataatcaca ccgacagcca aatcaatcac gtttccacgg
     4081 aacaaaaagg ctttcaaatc ttttaacata tcctaaatat gtcctttcat aaatatttta
     4141 ctctatatat aataaccgtt aaaaattatt ttacaagtaa tttgtttcag aaattttaca
     4201 ttttcccgta tttagtatac aatagagtat gttaaactaa gggaagagtg ttcacttttt
     4261 aaattagcta gtatgatatg aggagggaat gtgctttcaa aggataaaat tactgaaata
     4321 aaacaagctc tcaatatcgt tgatgttatt ggtgaaacgg ttgctttgac taaggccgga
     4381 cgtaattatg tcggtctttg cccttttcat ggggagaaaa ccccgtcttt caatgtgatt
     4441 gaagataagc agttctacca ttgttttgga tgtggtaagt ccggagatgt attcaagttt
     4501 gtcgaagacg ttcgtggtgt ttcttttgca gatgcggcag ctatcttagc tgagaaggca
     4561 gggtttcaag tagatgtaac tccttcctat catcaagagg agaaaagggt tagtccgcat
     4621 caggtactgt atgatattca tcgggatgct gcaaagtttt atcatgccct tttgatgaca
     4681 accaaaatgg gtgagaaagc tagagcttat ctacaccaac gtggcttgac agatgatgtc
     4741 ataaaaacat tccagctagg cttagctcct gccgaacaga atattcttta ccaaaaacta
     4801 tcaggtcaat atgacgaaga aagtctattg aattcgggtt tgttcaatcc aagtgagaat
     4861 aatattattt atgatgcctt tcaagcgagg attattttcc ccttggcgga tgaatatggt
     4921 cgaattgtag ctttttcagg tcggatttgg accgaagaag atcgaaacaa taaacaatta
     4981 gctaagtata aaaactctcg tagtactgcg attttcaata aaagctatga attgtatcat
     5041 ttggacaagg ctaaagcggt tattaagaag caacgtgaag cctatctcat ggaaggtttt
     5101 ctagatgtca ttgctgctca tcgtgtaggg attgataatg cagtggcttc catgggaaca
     5161 gctttgacaa gagagcatgt tgcacatcta gctaagtttt gtaagaaaat tgttctgact
     5221 tatgatgggg ataaggctgg acaggctgct accatgaagg cgttggatga actacaagat
     5281 tttcaggttg aaattgtgag tttgccagat aatatggacc cagatgaatt tttgcagaaa
     5341 aattcggaag aagccttgca acaggtttta accaagtcac gaatcagcga tgtagaattt
     5401 ttgattcaat acttgaaacc tgaaaatcct gacaatctac aaatgcagat tgagtttgta
     5461 gataagatta caccaattat tgccaaagta tcatccatta cagctcaaaa ttcttatatt
     5521 tataaggtgg cggatttact ttctgacttt gattataatc aggtggaaca ggcagtaaat
     5581 gctgttcgtc tgaaccagcg ccaagagaga acacaacagg tatttcaatc acagactggt
     5641 cagtcttatt tgccaccagt ccaaacgatt gctcgtataa cgagtcttat tcgaacagaa
     5701 aaccatttac tttatcggat ggttgaacat ccttatattc tcaatgagtt ccgtttacga
     5761 gaagattttt attttgcgac gccagaattg caagctattt atgatatgtt aaaaaaatct
     5821 ggggaaatta ccagttttga actatcacag ttgaacgatt ccgctcaaca ggcttggtat
     5881 cgtatgcaag aagaacgttt acctaatgaa gtatctccac acgaaattga agaattagaa
     5941 attcggcgag acaaggaatt gttgaataag gagaaccagc acctagcacg gaaaatccgt
     6001 gaacattccc atgtgggaaa tgcagatatt gccctcgatg agttgcaaaa actcctcgat
     6061 agaagaagac aaatggagta aatatgacca ataaaaaaga taaaaaaaca gaagtaacta
     6121 cttttgatgt acaagttgcc gaatttatcc gtaaccataa aaaacaaggt tcagctacag
     6181 acgatgaaat caatgaccaa ctggttattc cgtttacgct tgatgctgat gggattgatg
     6241 acttgctcca acgtattcaa gatgccggga tttcgattgt tgacaaggat ggtaatcctt
     6301 ctgcgcgtgc tatgcaggta gaggaagaac caggattatc tgatgaagaa ttgctcggaa
     6361 gcacttctgc aaaagtgaac gacccagtcc gcatgtattt gaaagaaatt ggtgttgtac
     6421 ctcttttgac caacgaggaa gagcaagaat tggcattggc ggttgaagca ggtgacccag
     6481 aagcgaaaca acgtttggct gaagccaact tgcgtttggt tgtttccatt gccaaacgct
     6541 atgtcggccg tggtatgcag ttccttgatc ttatccaaga aggaaacatg ggcttgatga
     6601 aggccgttga taagtttgac tactctaaag ggttcaagtt ttcaacttat gcaacttggt
     6661 ggattcgtca ggctatcact cgtgccattg cggaccaagc gcgtacaatc cgtattcctg
     6721 ttcacatggt agaaaccatt aacaaattgg tccgtgaaca gcgcaatctc ttgcaggaat
     6781 tgggccaaga tccaactcct gagcaaatcg ctgagcgtat ggatatgacg cctgagaaag
     6841 ttcgtgaaat cctcaagatt gcacaagagc cagtgtcttt ggaaacccca atcggtgaag
     6901 aagatgatag tcatcttgga gattttatcg aagacgaagt cattgaaaat ccagttgatt
     6961 acacaactcg tgtcgtactc cgtgagcaat tagatgaagt cttggatact ctaactgacc
     7021 gtgaggaaaa cgtattgcgt cttcgttttg gtttagatga tggtaaaatg cgtacgcttg
     7081 aagatgttgg taaagtcttt aacgtaaccc gtgaacgcat ccgccaaatc gaagccaaag
     7141 ccctccgtaa actccgccac ccatcccgca gcaaaccact cagagatttt atagaggatt
     7201 gattttgtct gggagacaaa atcaaccgct cgctgaaaac aggaaacgag cgagagttcg
     7261 gggaggtttt gacacaaact tcgtttgctt catctccaac cttcaacagt ctcccagact
     7321 gttgaagcct gcccagaaat aagaaagcag gctaacccag tggtgtttta acccgagcct
     7381 agaaatagta aagtgaggct aacctccggg tgaggtgatc gacgtttctc atatcattcg
     7441 accataatga tgtgagaaac tagtaagtcg tctaggcaat tctattggga attgccgtta
     7501 gttgagtagc ttttcaaagc actcaacttt ggcgagttga accgctcccc ttgaaattag
     7561 aaagggagcg taacgtccag tggacttttt gacacaaact tggtttgttt cttttctagt
     7621 attgaacttg tgaacaagaa agagagaaaa atgacgtaca cagacgatca aattaaagac
     7681 attcaggagc gtatttttca tgctcttgaa gatgtgattg accctgagct aggtatcgat
     7741 attatcaatt tagggctaat ttatgaaatc cgatttattg agggcaaggc tgaaattgat
     7801 atgaccttga cgaccatggg ctgtccatta gctgatctaa ttaccgatca aattcatgat
     7861 gtactgaagg atgttccaga ggtaacggaa gtagatgtta gactggtttg gtcgccagcc
     7921 tggacagttc aaaaaatgag ccgttacgct cgaattgcat taggaataaa atagtttcaa
     7981 aaaagatgat ttcgaatatt cgaagtcatt tttttagaat tgttcatgat tttgttgaaa
     8041 aaatatcaat tttccacttg tcaaacaaga aaattcgtgt taaaatgaaa aagcctagga
     8101 aaagtagtca tacctattct agcaaatatc agacctatat gggatgagta gctctgctat
     8161 tgatcataac caaagcctac ggacaggcgg gtcgaatgcc gaagcgtggc gaaagccaca
     8221 ttattgatag ggttaaaagc ctacatttta taagttgatg ttgggaagtt tttcctaatt
     8281 tctagttttg tcagtgtggt gaaagcacac gtcatcttgt gaaacggtca ataaagtacg
     8341 tatatatttg cactggagag taggaaacgg taggcacata aactcaagag aagaataaaa
     8401 aacgtcaatt tggattgtag agcaggatga accctgctct ttttgctttg ttatgtgact
     8461 tttagtccgt tacgctccat aaggtgcgtg acaaataaac cacccgctat gcgggtgcgc
     8521 gatgaaggtt ataccaaaaa aactccaaac gcgatacaat aaaggtgttc aagcctattg
     8581 taaagcgaaa ggagaaaaat atggcgcaaa aggcacatag tttatcacat acaaagtggt
     8641 tgtgttctac cacattgtct ttacacctaa gtatagacga aaaatcatct ataatcaata
     8701 tcgaagtagt ttgggagaaa tattccgacg tttgtgtact tataaaggtg ttgaaattat
     8761 cgaaggtcat ctgatgccag accatgttca catgttagtc agtattcccc cgcggttaag
     8821 tgtatccagt tttatgggct atttaaaagg caagagtgct cttatgatgt ttgataaaca
     8881 cgccaatctc tctataaatt tggtaatcgt catttctggg cagagagctt caacaatttg
     8941 gggaattgtt gaagagtgta agttggactt aatgaagcca caattaagaa atatatacaa
     9001 gaataaagaa attatccagt ggatgatttc ttcacgagct taaaatctag aaagcgagtt
     9061 aaacatgatc tagcacttga taaattgagt gtaaaagagt atgaagattc ctttagggat
     9121 aatggcaagt agtacgaatg cctctttaag aggctagtga cgagtcaaaa gcagtgaggc
     9181 ttgaacaaag tgaaagccag cgtctttagg cgctggctgg tgatgtgggc ttatagccct
     9241 tgttcaaacc acccgttttc acgggtggtt atgacttatc ctaacaattg ctgcaaccat
     9301 tggctgccat agatccaaaa gaagctatag gccacaactg agaaagggcg acaaagtaaa
     9361 gtaatcataa taaatttccg atagctcatg cttgttaatc cagtaatcat caccactatg
     9421 tcagctggag aaatgggaga aagcatacaa agaacaaaga aaatttcata actacgttta
     9481 ttatcaattt tgctttcata tttgtaaaac gtatcttcag acatgaagag aagacaaaat
     9541 ttctttccat agcgacgagc caaccagaaa aggatgatac taccgattga aattccaaga
     9601 taattgagaa agaatcccca ccaaaaatga aatacgagga aacctacaac agtcgtaaca
     9661 ccgcctggaa taatcggaaa tacaacttga ataatctgaa tagctaaaaa ggagaggcta
     9721 cctaaagcac cttggctttt gattaaatcg cttaagacat tttggtcgtt caaaatgcca
     9781 atcttataga gccaaaacag aaaaatagca gtcccgataa gggtcaaaac acttaatact
     9841 tgaatggttt tttgccaaaa tttatacata cttttatttt accatatttc aaaaattttt
     9901 taaattgtaa ggaaaatgta aataattttg ctatttataa aaaattctgc tataatagtt
     9961 cctgtatcaa atcctacggg gttgttacgg attcgacagg cattatgagg cttgttctgc
    10021 aactcatcgg cagatgtaaa aatgccagtt aaatataact gcaaaaaata caaacactta
    10081 cgcattagca gcttaataac ctgcctgcgt gaccattcgc gaattgcttg tgtttgctga
    10141 ttggtcttaa aataacaagc tacgttggga ttgagtcagg ctgttccaaa agagatttac
    10201 tgactcgctt ggtctaggtt tgagttatgt atcgagccca agttaaagca agacataacc
    10261 tatggttgta gacgaataag ttagcaggtg tttggacgtg ggttcgactc ccaccagctc
    10321 catatatgga agattactca agaggctcaa gaggccgtgt tggaaacgcg gtaggcgtgt
    10381 aacagcgtgc gtgggttcga atcccatgtc ttccgtatgg caagaacgat gaaaatcgtt
    10441 cttttttctt gcacttgaaa ttatctaata agaataatgt tcattttttg tggagattgt
    10501 cttgtatttt gtcaaaaata tgatatgata gttaacaatc tacttacgaa agaggaagtg
    10561 ttgatgttga atgtacaaga attagccaag acagaattgc attgccattt ggatggttcc
    10621 ctatctttat cggcaatccg acaacttgcc caactggcag aaatttccat tccagacaag
    10681 gatgaggaac tcagaaaatt ggtcagtatc gaaggcaagg tggatagcct gatgacctat
    10741 ttgaaaactt ttgactttat ccgtccactc ttacaaaccc cagaagcatt ggaattagct
    10801 gcctacgatg ttctaggtca agcatcagag gatggagtcc tctatattga acttcgcttt
    10861 gcaccagaac tgtcgacgga tcaagacttg actattttag aagcggtctc agcagtttta
    10921 gttggactaa acagggggca ggaagatttt ggagtggttg ctaaacttct ggtttgtggt
    10981 ttaaagcaaa cgaatacgaa tcaaacgaag gaactctttt ctgctattgc tgatttggca
    11041 ccgaaaggat tggctggctt tgattttgcc ggaaacgagg cagacaaccc aactcatgtg
    11101 ctggctgagt tgattgacta cacacaatct ctaggttacc ccatgacctt ccatgctggt
    11161 gagtgtggtt gcgtgaccaa tgtagcccaa gctctgacct tgggtatcaa gcggattgga
    11221 cacggaacgg ctcttagcgg tcacgctgag gctattcagg cttttgtcaa tagcggagca
    11281 acgcttgaga tgtgcctgac ttcaaatctc cagaccggag ctgcccaaac tctagcagac
    11341 ttcccctatg aacagctggt tcaagcggga gcaaagatta ccatcaatac agataatcga
    11401 acggtttcca atacaaacct aaataaagaa tatcagctat ttatagagta ttttggaact
    11461 accaaggaag aattttatca attcaacaga aatgctattc aagcaagctt tgccagtgaa
    11521 gaagaaaagg cgaacttact tgatgtccta gctcaaaagt ataatttgta aaaagaaagc
    11581 tctaggccat gtcagaacga caggcaaaga gctttttctt attgcaaatt caatttcttg
    11641 gtcatgataa agtgtgtacc aaaatagtag gcaaaggcta ggataatatt gatcaaggct
    11701 aagattggac taggatataa tggtagtgcg gcattataaa ggttctctag ataattggta
    11761 aaaatgagag ctccaaacac accgagaaca attgaaattc cgaaataggt taaaatggca
    11821 aacagtagac ggtggtcttt aaacagttga ccaacagata tggagaagta gatgagtaag
    11881 attcccattg ttgactcgat aagtgaataa aataaatgag caaaaactac tgaccagtct
    11941 atttgttgaa taagagtttg tagctcaggg ataacaaatt cttcgcttcc cagcatgagg
    12001 acagctaaaa caatcccgat agaaagaata atggtaattc cagctaataa gtaccaaacc
    12061 aaagatgcca agagtttact tagaataatc tggtggctat ttacaggtaa ggtcatagtt
    12121 aaataaccct gacgtccata gacatttttt ctaaaacgat tgatgaccat gaaaaaagtt
    12181 gataaaccga gtgctgcaat taagataccg aaggtcatga aggatgtacc gaaaagaacc
    12241 atttcagcac cgccaggttc agtgcttcca gcttgtgccc gtaaggtcaa agcttgtaac
    12301 cagaatccaa gtattgcaga taggaccaat gcacctgcat aaattcccaa ataccattta
    12361 cctacggatt gaaattcgta tttcaataat tttttaaaca tagcaatctc cttctaacta
    12421 agccttaaag tcttggcgga agagttcgtc aatagactcg ccactttcaa tgcgaaggtc
    12481 atccacgttt tcatggcgaa taacgctacc atattgtagg aaaatgactt cgtccaaaat
    12541 ctgttcaaca tctgaaatca aatgcgtgga aatgattaca gaggcagtag gcgaatagtt
    12601 gttgacgatg gtttttaaaa tataatcacg agcagcaggg tcaacaccac caattggctc
    12661 atccaagaca tagagttgtg cctgacggct cattaccaag atcagctgaa ccttttcctt
    12721 gttccctttt gacaggtgtt tcatgcgact gttcaagtca atccccaagt cttgcaagag
    12781 atgtagggcg cgttccttgt caaagtccgc atagaaatct gtaaagaagg tgatagcatc
    12841 agaaactttc atattttcat caagataggt cgtatctggc aaataggata cgattgcctt
    12901 ggtttcaggt gaaggtgtac gaccgttgat aaggacttga ccatactcag gttgcaatag
    12961 tccattgatg agtttgatta acgtcgtctt accagaacca tttggtccca aaagtccaat
    13021 aatcttacca gcagtcaatt ttaagttaac attattgaga gccacagctc cgccatagga
    13081 ttttgaaacc tgttgtaatt cgaccagggt atatgcgtta ttcataagac actcctttca
    13141 aataatcatc taactggtgg gttaattcat cttgattgaa gcccaagtcc agcatattgg
    13201 tcacaaagtt ttcaagttct ttctgtgcca agtgaagtct ggtctgtgaa atcaattcct
    13261 gattgtctgt gacgaaacgt cctgttgtgc ggactgagta aacaaatcct tccgtttcca
    13321 aatcagacag ggcccgttgc accgtgtttg gattgacgcc agctatttca gccaagtcac
    13381 gcacggttgg caatttatct cccgatttca attgattggt cacaatctgt aattttatag
    13441 tattactgat ttgaatatat atgggcatat tgttgtcaaa tttccaagcc attattcttt
    13501 cctttctagg cattttcgcc aatacctatg ttctaacaaa ataatacaat aaaaaatgat
    13561 aaattgcaag tcttttgatt gaatttctta aaaatatttt cctagaatat ttggtataat
    13621 agaagaaata aaaaggagaa gaccatgctg gcacaactag atacaaaaac cgtctatacc
    13681 tttatggata gcatggtgac gatagaaaat tatgtaggca aggctaaaga gcttggttac
    13741 cacgcattgg ggataatgga taaaaacagt ctatatgcgg cttacagttt tatggaatcc
    13801 tgtaacaaaa tggggcttca accaattatt ggttgtgaac tggactggaa attacaggga
    13861 ggggagcaga acgtcactac tcaattgatt gctctgacaa ccagaggtta tcgcaatcta
    13921 ttgaaaattt cgactgctaa gatgacagga caagatgatt ttgaaactat tcgtcaatat
    13981 ttagtcgaca tagcagtggt tgttccttat ttttctggca ttgagcacct tgagttaggt
    14041 gttaactatt atatcggagt gacggttgat acaccagttc aagattttaa gcaagcaata
    14101 ctcccaattc atacggttcg tttttttgaa gaggaacaat tggaaagtct acaggttcta
    14161 catgctattc gagataatat tccacttaat caagttgcag atatagatag tcgacaaaag
    14221 cttttatcgg ctgatagctt aaccaatcta ttttctaatc ggtttccgca agcagttgat
    14281 aatttacgtg acttggttgc agggatttct tatcaattaa atacagattt aaaattgccg
    14341 cgttttaatc gtgatagacc tgcagtggaa gaattatacg agcgctccta tcaaggatta
    14401 gaagagaagg gcttgactaa ttcactgtat aaggaacgct tggaaaagga attatccatt
    14461 attcatcaaa tgggatttga tgattatttc ttgattgtat gggacctact tcgttttgga
    14521 cgtagccaag ggtactacat gggaatgggg cgcggttcag ctgttggaag cctagttgcc
    14581 tacgccttaa atatcacagg cattgatcct gttaagcata atcttctctt tgaacgcttt
    14641 ctcaatgctg aacgttattc aatgcccgat attgatattg atattccaga tattcatcga
    14701 gcagatttta ttcgttatgt acgagatcgt tatggttcaa cccatgctgc gcaaattgta
    14761 acctactcga cttttggagc taagcaggcc attcgtgatg tatttaagcg tttcggaaca
    14821 cctgaatatg agttaagtaa tattaccaag aaaatttcat ttagggatag tcttacttct
    14881 gcctatcagc gaaatgccgc ttttcgtcag attatcaata gtaagataga gtaccaaaaa
    14941 gcttttgcga ttactcaaca aattgaaggg caaccccgac agacttctat ccatgcagca
    15001 gggatagtga tgagtgatga ggacttgaca gataccatcc ctcttaaaat aggggatgac
    15061 atgctggtaa cccaatatga tgcacatgct gttgaggcga atggtctgtt gaaaatggat
    15121 ttccttggct tacgaaatct gacctttgtg caaaaaatgg cagaaggagt acgtgaacgt
    15181 tatcagcagg aaattgatat tgccaagatt gatttagaag acaagaaaac cttggaactt
    15241 tttgctgctg gtcggactaa gggaattttt caatttgaac agcctggtgc gattagcctg
    15301 cttcgaaggg tcaaacctgg tcgatttgaa gatatagttg caacaacgag tttgaataga
    15361 ccgggggcta gtgattattc ggataacttt gtaaaacgca aacatggaca agagacagtt
    15421 gatttgttgg acccaaccat tgctcctatt ttacaaccga cttatggtat catgctttat
    15481 caggaacagg tcatgcagat tgcacaggtc tatgcaggat ttacgcttgg caaggcggat
    15541 ttactccgca gggcgatgtc taaaaagaat gcccaggaaa tgcaggcaat ggaagcggaa
    15601 tttttacaag gagcactgaa aaacggacat gctgaagaga atgcaaggga aatatttggc
    15661 atgatggcca agttcgctgg ttatggtttt aaccgtagcc acgcctatgc ttattcagcc
    15721 ttagcctttc aaatggccta tttcaagagt cactatacgg atgtcttttt tgatgtcatg
    15781 ctcaatcatt ctagcagtgc ttatattgaa gatgcgatgc agtttgactt tgaggtagct
    15841 cgactcacga ttaacaatat tccttatcac gataagtttg ataaaagtaa ggtctaccta
    15901 ggattaaaaa cactgaaagg tttgcctaaa gatttagctt tatggatatt ggatcatcgt
    15961 ccctataagt ctgtagaaga ttttattttg cgcttgccag ataatttcaa gaaaaaggat
    16021 ttactaatcc ctcttattca gattggttta tttgatgatt ttgacgccaa tcgtaaaaag
    16081 attattgaaa atctagacaa tctctttgtc tttgcagagg caattggtac attttttgca
    16141 gaggagagtt atagttggac agatgcagaa gattacagcg acagcgaaaa atttatgcta
    16201 gagcaagaat tgctaggtgt tggtattagt ccgcatcctt tagtcaatat ttgtcgagag
    16261 tctaagcgta gttttacaga tttggctgat ttagcggttg gcaatcgagc gaccgttctt
    16321 gtgcagattc aagctattcg attgattcgt accaaaaaga ctggggagca gatggcgttt
    16381 cttcgagtga cagataccaa gaggacgctt gatgtgactc ttttcccaga atcttatcgc
    16441 caatacgctt ctattttgga agaaggggga atggggtaca tcacaggtag agtgcaagag
    16501 cgcgatggac agttgcaatt agttctagaa aaactagagc ctgtcagttt ggagaaattt
    16561 tggattcttt tggaaaatcg agaacacgat tatgccgttg ctcgtatttt ggataaatat
    16621 agaggaagca ttccagtagt acttcattat caagatagta atcagacaat tcaggctgag
    16681 caccacatgg ttatgaaaac gcctcaatta gaagaagagt taagtgaatt tgttatgaaa
    16741 acgatttttc gataaaaaaa tagcaaaaag tcaagcaagt ttaggttaag tatgttataa
    16801 tagggcagtt aaaatgaaaa gttaaaggag cattaacgaa tgaaacgtat tgctgttttg
    16861 accagtggtg gtgatgcccc tggtatgaac gctgctattc gtgcagttgt tcgccaagca
    16921 atttcagaag gaatggaagt ttatggaatc aacgaaggtt acgcaggtat ggttgcgggt
    16981 gatatccatg aattgtctgc acgttctgta ggtgatatta tttcacgcgg aggaacattc
    17041 cttggttcag ctcgttatcc agaatttgcc aaattagaag ggcaacttaa agggattgag
    17101 caattgaaaa aacatggtat cgaaggtgta gttgttatcg gtggtgatgg ttcttaccac
    17161 ggagcaatgc gcttgacgga gcatggtttc ccagctattg gtgtacctgg tacaattgat
    17221 aacgacatcg tgggtacaga ttttacaatc ggttttgata cagctgtaac aactgctatg
    17281 gatgcgattg ataaaatccg cgatacttca tcaagtcacc gtcgtacttt cgttgttgaa
    17341 gtaatgggac gtcatgcggg agacatcgct ctttgggctg gtattgcttc tggtgcagat
    17401 gttatcgttg ttccagaaga agacttcaat atcaacgaca ttgttaaccg tattaaagcg
    17461 ggctacgaca atggtaagaa acatagcatc attgttttgg ctgaaggtgt tatgccagct
    17521 gcacagttcg ctgaagaatt gaaagcagca ggcgatacaa gtgatcttcg tgtgacagaa
    17581 cttggtcata tccaacgtgg tggttctcca acagcgcgtg atcgcgtact cgcttctcgc
    17641 atgggtgctc atgccgttaa attgcttaaa gaaggacgtg gaggtcttgc agtaggtatc
    17701 cgtaacgagc aaatggttga aaatccaatt cttggtactg cggaagaagg agcattgttc
    17761 agcttgactg cagaaggtaa gattgtcgtg aacaatccac ataaagcaga tttggatctg
    17821 gctgaattga accgtaactt gtcaatctaa tttgacattt cattaaagtg ttattaaggg
    17881 tcataagacc attaaataaa aaggagtttt gttaagatga ataaacgtgt aaaaatcgtt
    17941 gcaacccttg gtcctgcggt agaaatccgt ggtggaaaaa aattcggtga tgatggttac
    18001 tggggtgaaa gccttgatgt agaagcgtca gcacagaaaa ttgctcaatt gattaccgaa
    18061 ggtgcaaacg tattccgttt caacttctca cacggtgacc accaagagca aggtgagcgt
    18121 atggcaactg tacgccgtgc ggaagaaatt gctggtaaaa aagtaggatt cttgttggat
    18181 acaaaaggtc cagaaatccg tacagaattg tttgaagacg atgcaaaaga gttttcatac
    18241 acaactggtg aaaaaatccg cgtagcaact aaacaaggca ttaagtcaac tcgcgaagtg
    18301 attgcattga acgttgctgg tggtttggat gtatttgatg atgttgaagt tggtaaacaa
    18361 gttcttgttg acgatggtaa actaggtctt aaagtcatcg aaaaagatgc tgaaaaacgt
    18421 gaatttattg ttgaagttga aaacgacggt gttatcgcta aacaaaaagc tgtaaacatt
    18481 ccttatacta aaattccttt cccagctctt gctgaccgcg acaacgctga tatccgtttc
    18541 ggtttggaac aaggtttgaa cttcatcgca atttcattcg ttcgttcagc aaaagatgtt
    18601 gaagaagttc gtaacattct taaagaaact ggtaatgagc acgttcaatt gttctcaaaa
    18661 atcgaaaacc aacaaggtat cgacaatatt gatgaaatca ttgaagcttc agatggtatc
    18721 atgattgctc gtggtgacat gggtatcgaa gtaccatttg aaatggttcc agtttaccaa
    18781 aaaatgatta tcactaaagt gaatgcagct ggtaaagcag ttatcacagc aacaaacatg
    18841 ttggaaacaa tgactgaaaa accacgtgca actcgttctg aagtatctga cgtattcaac
    18901 gcagttatcg acggtactga cgcaacaatg ctttcaggtg agtctgcaaa cggtaaatat
    18961 ccagttgaat cagttcgtac aatggcaact attgctaaaa acgcacaaac tcttcttaac
    19021 gaatacggtc gtttgaactc tgatcacttt aaccgtgcat ctaaaacaga agttattgca
    19081 tctgcagtaa aagatgcttg tcactcaatg aacatcaagt tggttgtaac agttactgaa
    19141 actggttact cagctcgttc aatctctaaa taccgtccag atgctgatat cttggcagta
    19201 acatttactg agaaagtaca aaaatcattg atgctcaact ggggtgttat cccagttgta
    19261 acaaaccgtc cagattcaac tgacgatatg tttgatttgg ctgaacgcat tgccaaagaa
    19321 caaggtcttg ttgaagcagg agatgatatt gttatcgttg ctggtgtgcc tgtaggtgtt
    19381 gcaggttcaa caaacactat gcgtgttcgt actgtgaaat aatgtataaa gaaaaagtct
    19441 attctatcaa gctccttagc ttgaatgata ggcttctttg aatatatggt atgattttgc
    19501 aaaattcaaa ttgtattgat ataatataag gtgactaagt tgaaagagat ggacatatgg
    19561 acattcacat tcgtttttcg ttgagaaaac tagcagttgg tttagttcca gtgactttcc
    19621 tatttctagc caatcagtct gttctatctg cccaagcaga aacgatttct agtctagaag
    19681 aagaaacttc cctgttggaa ggagacttgg taccacaatc gcttgaaatc ataaatgtag
    19741 aagaacaagg ggaaaagaat aatagcgagt ttacaggtct aaatatatta gtagaaagtg
    19801 acaacctagc tcaagggagt gagaatgaag taggcccttc tgagctgaaa aatgagttac
    19861 ttgaagtgaa aattgataac cttttcgagt ctacaagtat tgagatccat gcagatatgg
    19921 aagagaaggt cattcctgag cacgaagata gtagcctccc ttctaatcta ccagtagcag
    19981 tccagaaaga tatggttgaa cagcctatca gtctttatac tagcgaagat ggtcagtaca
    20041 gagaaattat ttgggcacaa ggtataacgc ctcctagcat ggggcaaggt ggtgatttta
    20101 aaaaagaagt aacgggagaa ttcattgagt ataccgtgcc ttatgaagcc ggaaagggtt
    20161 attatgatgc taataagagc ttggatgctt ccttagaaga tttgaacttg tgttttgcgg
    20221 cagtttcttc caacatgttg cactggtggt tggaacaaaa taaggagtat gtagaacggt
    20281 atattagtga gaaatatgga gctgatttag ggcagcagga ctattctttg actgatataa
    20341 gacgttacac agattctttt gaaaatcagc aaaatagccg aatttttaac cttttcaagg
    20401 catattacgg tcgtcgtcta aatggatttg tatcagatgc cctggtggat ctatttatca
    20461 atggctatcc cccaaagagt caaggagggg tcaatttaga aaatcctgat ttggtgcctg
    20521 ataaacgcgg tggctttttt catgaagtat ttaaggagaa aatgctgacg gataggatgt
    20581 tcagcggaga ttatctctat tttggaaatt tggttcgaaa taacttagaa aatcaaggtt
    20641 tacttggctt gacctatcga acttttggaa cgactactca tattgtgacg gtctgggggg
    20701 ctgagtatga tgataaggga ttgatccgag cagtatatat tacggattcg gatgaccaac
    20761 atgatcctat tggcttgaag cggatgggga tcacacggga ttcctctggc aatcctcgtt
    20821 taaataataa tatcgtgaaa aattcggttg gttcttatct ggactacgtt cataccatca
    20881 atcttggtcg gaagcattgg gaaacttatt ttaatggatt ggaagatgaa aaacagactg
    20941 ccagacagaa actttcagaa gctaaatttg gcttacttca cgcaatccat gctcaagagg
    21001 agttttctga taaggaagaa agatcttatc ttgccctaat tgaagaaaaa tattttgaag
    21061 gtttgaagca aatcaatcaa gctatggcaa agcaggaact atcagaaatc ttgcaatccg
    21121 ctctgcaaag tttacggatt cccatgaaat ctgttgggca agctctagct tacgatagac
    21181 cgtttgggaa tcttattgtt catggaaact cagttcgaca tgatttgccc ttaggtcatc
    21241 tatctattca tggtgattca gttagatatg atttgccctt aggtcatcta tctattcatg
    21301 gtgactcagt taaatatgac ttgcctttag gacacctatc tcttcatgga agctccgtca
    21361 cgcatgagca
//
LOCUS       DASFQS010000031        21343 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.031, whole genome shotgun sequence.
ACCESSION   DASFQS010000031 DASFQS010000000
VERSION     DASFQS010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 21343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21343
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.031"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            411..992
                     /locus_tag="U1041_000981"
     CDS             411..992
                     /locus_tag="U1041_000981"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEM4768098.1"
                     /translation="MAQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRD
                     AFGVVSSRIGMRREAVAIDDDMDIFGYIQKIQPRPYCVLIDEAQFLRRHHVYDLARVV
                     DELDVPVMAFGLKNDFRNELFEGSKHLLLLADKLDEIKTICQYCSKKATMVLRTQDGK
                     PTYEGAQIQIGGNETYIPVCRKHYFSPEIKDLP"
     gene            1464..2543
                     /gene="prfA"
                     /locus_tag="U1041_000982"
     CDS             1464..2543
                     /gene="prfA"
                     /locus_tag="U1041_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001028822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEM4768099.1"
                     /translation="MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSKEEAATR
                     DTVTAYREYKTVLQNIVDAEEMIKESSDDADLEEMAKEELKQAKADKEAYEEKLKILL
                     LPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGG
                     IKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDI
                     DPKDLRVDIYHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIR
                     ARVADHFAQIAQDEQDAERKSTIGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTIL
                     SGKMDEVVDALVLYDQTQKLEELNK"
     gene            2543..3376
                     /gene="prmC"
                     /locus_tag="U1041_000983"
     CDS             2543..3376
                     /gene="prmC"
                     /locus_tag="U1041_000983"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEM4768100.1"
                     /translation="MNYAQLFAAYEEQLVAIGEEAESLSFTFRGLKGLNFTEFLLLLR
                     QEVTPTDKEEIDAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPRPETEELVDLI
                     LQENSGAGLRVLDIGTGSGAIAISLAKARPDWEVVAVDISKDALAVAQENARTNQVSV
                     HFLESDVLQAVTGQFDIIVSNPPYISPDDTDEVGLNVLTSEPHLALFAEEDGMAIYRQ
                     IAEQAGAFLKENGKLYFEIGYKQGQDLTDLLALHFPKKRIRVLKDQFGQDRKVIADDN
                     G"
     gene            3363..3971
                     /locus_tag="U1041_000984"
     CDS             3363..3971
                     /locus_tag="U1041_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEM4768101.1"
                     /translation="MTMDKLRTILENGGAVILPTETVYGLFAQALNEDAVNRVYQLKQ
                     RPRDKAMNLNVSNLNDIYFFSQNTPFFLEKLYNRFMPGPLTIILKANKNVPFWVNSGL
                     DTVGFRLPNHKQTLRLISETGPLIGPSANISGNESGKKFSDIQAQFSVDLPGIEDDQA
                     LTGIDSTILDLSGQKARILRQGAISREEIQKAIPEIEFEVVL"
     gene            3968..4399
                     /locus_tag="U1041_000985"
     CDS             3968..4399
                     /locus_tag="U1041_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768102.1"
                     /translation="MIRPIEKGDLVVIREINAQSLGYDCSLEQTERQFFRCTSTLGHI
                     MLVYIDDISGAVQGYIHAQVYESLYSDTGLNILGLAVLPGHQGQGIGASLLKAVEQIA
                     QKEGYHFIRLNSAENRLQAHLFYEKNGYHSDKMQKRFIKHI"
     gene            4423..5682
                     /locus_tag="U1041_000986"
     CDS             4423..5682
                     /locus_tag="U1041_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEM4768103.1"
                     /translation="MIFDKVNYKEFDKEVWEAIQAEEKRQQNNIELIASENVVSKAVM
                     AAQGSILTNKYAEGYPGRRYYGGTECVDVVESLAIERAKEIFGAKFANVQPHSGSQAN
                     CAAYMALIEPGDTVMGMDLAAGGHLTHGASVSFSGQTYNFVAYNVDEETGLLDYDTIL
                     EQAKEVQPKLIVAGASAYARTIDFAKFREIADAVGAKLMVDMAHIAGLVAAGLHPNPV
                     PHAHITTTTTHKTLRGPRGGLILTNDEELIKKINSAIFPGIQGGPLEHVIAAKAVSFK
                     EVLDPAFKDYAQKVIENSKAMAEVFLANPNFKVITGGTDNHLFLVDVTKVVENGKVAQ
                     HLLDEVNITLNKNSIPYEKLSPFKTSGIRIGSAAITARGFGVEEARKVAQLTIKALEN
                     AENEKALEEVRQEVRALTDQFPLYEGS"
     gene            5682..6656
                     /locus_tag="U1041_000987"
     CDS             5682..6656
                     /locus_tag="U1041_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006153495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HEM4768104.1"
                     /translation="MDIFVKKAIIHQFSPDDTELVLADQLLTVSPKIEEYLRKKIERV
                     FSDEAKTGQFNPDNPFLDYLDGDLLTNSVKIANLWKEEFSISENLKTNDLIFIEFERN
                     GVEHFAFLRISLRENLAHVGLESGSPLKITQNNLPGAGSAPDEALIVNLQTRKYHLIE
                     KRIKHNGAFLNYFSDNLLQVTPAISAKKSIKAVEQTAQKIADNFHQGDFQFQSKVKSA
                     IFNNLEEDNELSPEKLADQLFDNNLTARLNFVDQLKEVIPDKISFDEIDSSRQLKKFE
                     NQKLSLSNGIELIVPNAIYEDAESVEFIQNDNGTYSILIKNIEDIKSK"
     gene            6657..7256
                     /locus_tag="U1041_000988"
     CDS             6657..7256
                     /locus_tag="U1041_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme family protein"
                     /protein_id="HEM4768105.1"
                     /translation="MKKLIRTLILLLLIFLGYKFYQTYSAVKQVMTYQTMVQEVLAEN
                     DTPANEELVLAMIYTETKGQEADVMQSSESATGYANTITDSRESIRQGIIYLTENLRL
                     AEEKGVEVWTAVQAYNFGPAYIDYIAEHGGEHTLSLAKEYSRTVVAPSLGNTTEETYT
                     YFHPLALLNGGKLYVNGGNIYYARQVRFNMHLMRLINLF"
     gene            7357..8115
                     /locus_tag="U1041_000989"
     CDS             7357..8115
                     /locus_tag="U1041_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM4768106.1"
                     /translation="MKRNVLITGASSGIGKAIAYVFAANGDNIIITGRRLDKLEEIKQ
                     DIERQYHVQVSVHSFDITNMEQTIVNCQKILEEVGQIHILVNNAGLALGLDKFQDYDL
                     TDMMTMIDTNIKGLLTVTRQLLPQMVENNEGHIINIGSTAGIYAYAGAAVYAATKSAV
                     KVLSDGIRIDTIDKNIKVTTLQPGIVETDFSQVRFHGDKERAATVYQGIDALQANDIA
                     SCTLFVANQPAHVQISDMTIMATKQATGFTIHRD"
     gene            8132..8881
                     /locus_tag="U1041_000990"
     CDS             8132..8881
                     /locus_tag="U1041_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor 1 (IF-1)"
                     /protein_id="HEM4768107.1"
                     /translation="MNRKYLALALGLLTIMSLSACQTEKKGSSASTSTADTQVSNANT
                     STSSTIQREISLSSMDIDALMQGNYDSILGTWQNSQGNSLVFNSKGLVADSQSLLGRG
                     KITDGIFETGYVDATIGDVTLLMIPKGTQANTTETDTTDSTRDRMIVISQETTADVVD
                     VYYRLTNSATSGIDPLKNTETGVQLDSGPKTIDYANSILGENNWRVIEGNYTRTESIP
                     YNILEGDDNARYTIYQNGVIINADYQIVYQP"
     gene            8903..9256
                     /locus_tag="U1041_000991"
     CDS             8903..9256
                     /locus_tag="U1041_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
                     /protein_id="HEM4768108.1"
                     /translation="MTFTSFEPTRNVQDFHLAAFAYYDGLDVIDQLKPGTPVQLVGEP
                     SNPHDSEAVAIFYQGTKLGYIPSDKNSLISRLIYFGHGDILEARIQMTNTENHPDRQF
                     RVVVKLKDNRKNDSR"
     gene            complement(9277..10224)
                     /locus_tag="U1041_000992"
     CDS             complement(9277..10224)
                     /locus_tag="U1041_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768109.1"
                     /translation="MDVLPSFFIFLFNKLNIFVDLKNIFCYTCVMKTSTLGKLLELPN
                     FHHFYTVPIRENTESSGNYIIVFEQDKQPVFVDLKNETGHTREVRFASHFDSAGLLVG
                     LGAIPINYWPTCQILGVKKNNNRRGLSLSSLMDGYGRLPIFKEMAERYRARGQSTIYD
                     PYRYSYTIDEKKVIKDNQLTLIPKKEYEKIKDFHPFLQTKHGNVYAVPCFYQDRKRNQ
                     ITKIYIMGWYFYEKQLKISWKPSHSRKSRWRSSLVSVDKLSDRFFFQGELYKKGTYPV
                     FLEDLTIKNKAYQHRLDREFAAFLSIIEEQKQRAQLRVK"
     gene            complement(10252..11040)
                     /locus_tag="U1041_000993"
     CDS             complement(10252..11040)
                     /locus_tag="U1041_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768110.1"
                     /translation="MAVLKYSKVLLLVLLIATGLSCIGIYWLGKEQNRLLNEQWHALN
                     IRIINDLGTKIDAIGGPQNPRIIGFFQRDDTTAISQRIGTASEEELKIAKPDNLFQKE
                     WIVLYPQTRSSPFENTSAYAVMKTSIKADWLHVTTSSETELDIFYEKADESLLTLEDL
                     VQDKESFRTTLKTILVSAKNEAEIQVQKDILEMFESDDWSAIPFAYTEKSLILEKAVI
                     SISAFVDSLNPYYFSEQTLADLRLSEESRQALEDSVDKTIITYP"
     gene            complement(11211..11528)
                     /locus_tag="U1041_000994"
     CDS             complement(11211..11528)
                     /locus_tag="U1041_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017649262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768111.1"
                     /translation="MTLKQYIGTRVRQIRKAKNLSQQQLSEKAEVGIDYISNLETKGS
                     NIKVDTLEKIISALEIEVSDFFQVVDSTTNYNVLNELNKLPIKKREELEEIILLMIKS
                     LQS"
     gene            11696..14128
                     /locus_tag="U1041_000995"
     CDS             11696..14128
                     /locus_tag="U1041_000995"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4768112.1"
                     /translation="MRRPKKVVESLAVTVAIGASVTNLQVNAEEIVTPVTESAETVVT
                     ATPTTISAEQVEQAKEVASADAEAVKVQDAVDKAAGEAVANETKAVEDLTEAVAKVST
                     AQDALPAAEADVATQTKAVTDAQAAVTKAEEVVASQEGDVAKAQATADAAKTAEAQTS
                     AKLEEAKAQPVVTAETVNTQIAATKSTIATKEAEVAETTTAIAATDAKLASAKEAVAN
                     YKPTTVTETVATTNYVELTGADRDMEDIVREQFPDLNPADYARQLETVIFDGEDTQTI
                     VLTPEQAAEYKATGSFTYVYDAKAVSEEAAKVIAELRRINGITLKPMRNTTQEDLELK
                     VTDSFVAFTQKRAQELLTNFSHGSSLVDPVNGYDMSRVGESLGKDFFDMTSAGSNKKK
                     NLSHAEVAYNMILSWFSDYENATGANFGHRFHMLDASGNIAIGMATDGDTQYFVLLSD
                     GHPRTVNYEQSVVNGKLTQTFNGNRLKYLPKRTFNYVVSTVVDDSQALKDAVAKLEAE
                     KSALLTQQAQATETLNQALISLASLEQAKTDVTLANTKRTVAIAEAQDAFDKASAAAK
                     TAATNLQQVLASYEASLSSLSTAKGDLKVAQDKLVTTQAKVAELKTLLATQDQLLADL
                     DAAKARLNDATLVKSESSALLVELTAKAKASQTEADRLATLFALQEQFNTVITDDTVT
                     ATPKDAPTVNEKPVLNIDDVIKATPKDEQTVSDLPVVKTDTDKELDLTVIGEEGNADK
                     EKTVVGPTVYKPQPGVTVQQTTSGEKVTYSRVERAHTLPNTGSEDNIVLMGIGFVLAG
                     LGLAGARRRRHG"
     gene            14173..14862
                     /locus_tag="U1041_000996"
     CDS             14173..14862
                     /locus_tag="U1041_000996"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768113.1"
                     /translation="MNTYSKEELMEMLGYSFQVLKAVKDLDDAILRVQDRAANKITGN
                     YIKLRSLYNKALAVFIIFCIVLGALQGKYALGMHSIFQFLLIYVVFWALFSPILAVIN
                     FVFKYFAKREFVKAETNDESNAYRQKGRELLKDKQFLEYKSIIPSTYFNMNDLYLLYS
                     YLENFRADNFKEAANLLSEEKHRDNVEYNQAMMKDSLLSIQNNVRYQSVMQTIQLLET
                     AKIRSSIDSLF"
     gene            complement(15193..16743)
                     /gene="guaA"
                     /locus_tag="U1041_000997"
     CDS             complement(15193..16743)
                     /gene="guaA"
                     /locus_tag="U1041_000997"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009880616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEM4768114.1"
                     /translation="MTKQDVQKIIVLDYGSQYNQLISRRIREFGVFSELKNHKITAEE
                     VRAINPIGIVLSGGPNSVYAENAFDIDPEIFELGIPILGICYGMQLITHKLGGKVVPA
                     GEAGNREYGQSNLQLKTESALFAGTPEEQLVLMSHGDAVTEIPADFHLVGLSADCPYA
                     AIENTERRIYGIQFHPEVRHSVYGNDILKNFAFGICGAKGDWTMENFIETEIEKIRQT
                     VGDKKVLLGLSGGVDSSVVGVLLQRAIGDQLTCIFVDHGLLRKNEGDQVMEMLGGKFG
                     LNIIRVDAAKRFLDLLAGVSDPEKKRKIIGNEFVYVFDDEASKLTDVEFLAQGTLYTD
                     IIESGTDTAETIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTALGMPDEVVWRQ
                     PFPGPGLAIRVMGEITEEKLQTVRESDAILREEIAKAGLDRDVWQYFTVNTGVRSVGV
                     MGDGRTYDYTIAIRAITSVDGMTADFAKLPWDVLQKISVRIVNEVDHVNRIVYDITSK
                     PPATVEWE"
     gene            17019..17717
                     /locus_tag="U1041_000998"
     CDS             17019..17717
                     /locus_tag="U1041_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003076949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4768115.1"
                     /translation="MKAAYITIHDKIKEQIDNGIWKIGQRLPSERDLADEFGVSRMTL
                     RQGITLLVEEGILQRKIGSGTYVASTRVQEKMRGTTSFTELVQLQGKTPSSKLLSYTR
                     TKPNEKEVEQLGLSRGEYVIRMERVRYADNVPVVYEVASIPERLIKNVPKEDVTNHFF
                     KTLMDNGYRIGTSKQTIFARLANEKVAQYLQISKNQAILALKQVSYLEDGQAFEFVNS
                     QYVGERFEFYLENN"
     gene            17821..18153
                     /locus_tag="U1041_000999"
     CDS             17821..18153
                     /locus_tag="U1041_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HEM4768116.1"
                     /translation="MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEE
                     FQVSRQAVYDNIKRTEKLLEDYEMKLHMYSDYVVRSQIFDEILNKYPEDAYLKEKIAI
                     LTSIDNRE"
     gene            18166..19740
                     /gene="ffh"
                     /locus_tag="U1041_001000"
     CDS             18166..19740
                     /gene="ffh"
                     /locus_tag="U1041_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000863601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEM4768117.1"
                     /translation="MAFESLTERLQSVFKNLRRKGKISESDIQEATKEIRLALLEADV
                     ALPVVKDFIKKVRERAIGHEVIDTLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPT
                     IIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPV
                     FELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAELREIKEFAQPNEI
                     LLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIKFTGT
                     GEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFNDF
                     IDQLDQVQNMGPMEDLLKMIPGMAGTPALANLKVDEREIARKRAIVSSMTPAERENPD
                     LLTPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQGVMSGDMNKMMKQMGINPNNLP
                     KNMPNMNGMDMSALEDMMGGAGMPDMSQLMGGAGMPDMSQMFGGGLKGKIGEFAMKQA
                     MKRQANKIKKAKKKRK"
     gene            19934..20602
                     /locus_tag="U1041_001001"
     CDS             19934..20602
                     /locus_tag="U1041_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SatD family protein"
                     /protein_id="HEM4768118.1"
                     /translation="MNYIAIIGDIVNSKQTSNRSSIQERLKQQLNRINHSFAQDFASP
                     FTITKGDEFQALCKPNPYIFLIIDQIQLAFRDEVEIRFGIGLGEILTAIDPKLSIGAD
                     GPAYWEARKAIDFIHDNHDYGTSKIAFSSEYKQIDRVINPLLTSSDFIKATWNRSQTD
                     LFETLISKKIYQEEFTQKPIAEKMKLSQSAFTKRLKSSGIKLYLRNRQTAMNLILQLS
                     QKEG"
     gene            20606..21343
                     /locus_tag="U1041_001002"
                     /pseudo
     CDS             20606..21343
                     /locus_tag="U1041_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909823.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
BASE COUNT         6812 a         4191 c         4293 g         6047 t
ORIGIN      
        1 ggtaaatttc acctgctttc tataagtaaa taattgacat cgcttacaat ttgtgctatt
       61 ctatacgtac attggaggtg ttggcttatg aactatgttt atcgtatggt gttttcattc
      121 ctgcttgccg gtctgttttt gtatctagtg ataactgttt tttaccaaac tatatgggaa
      181 ggccccttgt ttcttgcgtt ttccttcttc agcttaatct atggatgcat catgctatac
      241 aagtggaaac caaaagctgc taaaattatt tttgagtgtg tcggaaactt cttatcatta
      301 ccttggtcct aataacaaac aagctcaaat cgggcttgtt tttctatttc ctaaatggtc
      361 aaattatgat aaaatggaaa gagtgaaatt ttaagattgg aaagagaaaa gtggctcaat
      421 tatattataa atatgggacg atgaattctg gcaaaaccat tgaaattctt aaagtagccc
      481 ataactatga agagcaaggc aagcccgttg tcatcatgac ctctgccttg gatactcgtg
      541 atgcctttgg cgttgtttca agccgtattg gtatgcgacg tgaagcggta gcgattgacg
      601 atgatatgga catttttggc tacattcaga aaattcaacc acgtccctat tgtgttttga
      661 ttgatgaagc tcagttcctt cgtcgtcatc atgtttatga cttggcacga gtagtggatg
      721 aattagatgt acccgttatg gctttcggtc ttaaaaatga tttccgcaat gagctctttg
      781 aaggctccaa acacttgttg ctgttggccg ataagttgga tgagattaaa acaatctgcc
      841 aatattgttc caagaaagcc acgatggtgt tgcgaacgca agatggtaaa ccaacctatg
      901 aaggcgctca aattcaaatc ggtggcaatg aaacctacat tcctgtctgt cgcaaacatt
      961 atttttcacc ggaaattaaa gatttaccct aatttttgaa aatgaactga atttgcctat
     1021 gactctgtgc caattttcat gacttacata ctacggcaaa ggaattgaat acgggctacg
     1081 aactgtgcct gtttcatgac ctacatatta cagaaaggaa atgaacacgc cctacaagct
     1141 gtgtcaaaaa gataatttct ccaagtgttt gtaacacttg gtcaaaattc ctattttgac
     1201 tgtgcttgct taacgggctt tgtatcttaa tagaactgaa cacgccctac aagctaacta
     1261 gaagtgtgtt ctttccaaat ttttagaaag gaactgaatt cgggctacga actgtgcctg
     1321 tttcatgttc actatattac agagaggaac tgaatatgcc tacgactctg tggaaataga
     1381 taattcttcc tagaaaccga agtttctacg tcagaattcc taatttcctt tgagtcgctt
     1441 aacggcattt atatcttgat tttatgaaca tctacgatca attacaggcg gtagaagacc
     1501 gctacgagga acttggtgaa ttgttgtctg accctgaggt tgtcagcgat accaagcgtt
     1561 ttatggagtt gtctaaggaa gaagctgcaa ctcgtgatac agtaactgcc taccgcgaat
     1621 ataagactgt acttcaaaac attgtcgatg cagaagaaat gattaaagaa tcttctgatg
     1681 atgctgactt ggaggaaatg gctaaggaag aactcaaaca agctaaggct gataaagagg
     1741 cttacgaaga aaagctgaaa atccttcttt taccaaaaga ccctaacgat gacaaaaaca
     1801 tcatcttgga aatccgtggt gccgcaggtg gtgatgaagc tgccctcttt gctggagacc
     1861 ttttgaccat gtaccaaaag tatgcagaag gtcaaggctg gcgttttgaa gtcatggagg
     1921 cttcttataa tggtgtcggc ggtatcaagg aagtggttgc catggtctct ggtcaatccg
     1981 tttattcaaa actcaagtat gaatcaggag ctcaccgtgt ccaacgtgtc cctgtgacag
     2041 aaagccaagg tcgtgtccac acctcaacag caactgtcct catcatgcct gaagttgaag
     2101 aagtggaata tgacatcgat ccaaaagatc ttcgtgtcga tatttaccac gcatctggtg
     2161 ccggtggtca gaacgtcaac aaggttgcga ctgccgtgcg tatcgttcac ttaccaacca
     2221 atatcaaggt agaaatgcag gaagagcgta ctcagcagaa aaaccgtgaa aaggccatga
     2281 agattattcg tgcccgtgta gctgatcact ttgcacagat tgcccaagat gagcaggatg
     2341 cagagcgtaa atcaactatc ggtacaggag accgttcaga gcgtatccgt acctacaact
     2401 tcccacaaaa ccgtgtgaca gaccaccgta tcggcttaac cttgcaaaag ctggatacta
     2461 tcttgtcagg taagatggac gaagtcgtag atgcccttgt tctctacgat caaacgcaaa
     2521 aactagaaga gcttaacaaa taatgaatta cgctcaatta tttgcagcat acgaagaaca
     2581 attagtcgca atcggtgaag aggcagaatc cctgtccttc acctttcgtg gcttaaaggg
     2641 attgaacttt acggaatttc tcctcctgct ccgtcaggaa gttacaccga ctgacaaaga
     2701 agagattgat gcgatttttc agcaactttc ccagcaccga cctgcccagt acattatcgg
     2761 caaggctgat tttcatggct tggagtttgc agtggatgag cgagtcttga ttccaagacc
     2821 tgaaacggaa gaattagttg atttgatttt gcaggaaaat agcggagcag gtttgcgtgt
     2881 attagacatc ggtacaggaa gcggtgccat agctatttcc cttgcaaaag ctagacctga
     2941 ttgggaagtg gtagcagttg acatttcaaa ggatgcccta gcagtggctc aggaaaatgc
     3001 aagaaccaac caagtctctg ttcactttct agaatcggat gtcttgcaag ctgtgacagg
     3061 gcaatttgac atcattgttt ctaatccgcc ctatatctca ccagatgaca cagatgaagt
     3121 tggactcaat gtattgactt ctgagcctca tctggcctta tttgcggaag aagatggcat
     3181 ggctatctat agacaaattg cagagcaagc aggggcattt ttgaaggaaa atggaaaact
     3241 ctactttgaa attggctaca agcaagggca agacctaacc gacttactcg ctctgcattt
     3301 ccccaaaaag cgaattcgag tcctcaaaga ccaatttgga caggatagaa aggtcatagc
     3361 ggatgacaat ggataaactc cgaacaattc ttgaaaatgg tggtgctgtt atccttccaa
     3421 ctgaaacagt ctatgggctt tttgcccaag ccttgaatga agatgcagtc aatcgtgtct
     3481 atcagttgaa acagcgtccg agggacaagg caatgaactt aaatgtctca aatctgaacg
     3541 atatttattt tttcagtcaa aatacaccct tttttctgga aaaactgtat aatagattta
     3601 tgccaggacc gctaacgatt atcctgaaag caaacaaaaa tgttcctttt tgggttaatt
     3661 ctggactgga tactgttggt tttcgtcttc ccaatcacaa acaaacctta cgtttgattt
     3721 cagagactgg cccacttatt ggaccgtccg ccaatatttc aggaaacgaa agtggcaaga
     3781 agttttcgga catccaggca caattttcag ttgatttgcc tggcattgag gatgaccaag
     3841 ctctgacagg cattgattca acgattttgg acctttctgg gcagaaagcg cggattttgc
     3901 gccaaggtgc tatcagccgc gaagagattc agaaagccat tcccgaaata gaatttgagg
     3961 tagttttatg attcgtccca ttgagaaagg tgacttggta gtcatccgag aaatcaatgc
     4021 tcaatcctta gggtatgatt gttcattgga acaaactgag cgacagtttt ttagatgcac
     4081 gagcacattg gggcatatca tgttggtcta tatagatgac ataagtggcg cagtgcaagg
     4141 ttacattcac gcacaagtct atgaaagtct ctattcggat acaggcctca atattctcgg
     4201 actagctgtt ttgcctggtc atcaaggaca agggattgga gcaagcctgc tgaaagccgt
     4261 tgagcaaatt gcacagaaag agggctacca ttttattcgc ctcaattctg ctgaaaatcg
     4321 tctccaagcc catcttttct acgaaaagaa tggctatcac tccgataaaa tgcagaagcg
     4381 ttttatcaag cacatttagc ccaatacaaa ggagtaccgt atatgatttt tgacaaagtt
     4441 aactacaaag aatttgataa agaagtttgg gaagctatcc aagctgaaga aaaacgccaa
     4501 caaaataata tcgaattgat tgcgtctgaa aacgttgttt ctaaagctgt tatggcagct
     4561 caaggttcta ttttgaccaa taaatacgca gaaggttacc caggtcgtcg ttactatggc
     4621 ggtacggaat gcgttgacgt agttgaaagt ttagctattg aacgtgctaa agaaatattc
     4681 ggtgcaaaat ttgctaacgt tcagccacac tcaggaagcc aggccaattg tgctgcctac
     4741 atggccttga ttgagccagg agacactgtt atggggatgg acttagcagc gggtggtcac
     4801 ttgactcacg gtgcatcagt tagcttctca ggacaaactt ataactttgt agcttacaat
     4861 gttgacgaag aaactggctt gcttgattac gatacgattt tagagcaagc aaaagaagta
     4921 cagccaaaat tgattgtagc aggtgcttca gcctatgcac gtacaattga ctttgctaaa
     4981 ttccgcgaaa ttgcagatgc agtgggtgcc aaactgatgg tggatatggc tcatattgct
     5041 ggtcttgtag cagcaggtct tcatccgaac ccagtgccac atgcccatat tacaacaact
     5101 acgactcata aaactcttcg tggcccacgt ggtggtttga ttttgaccaa tgatgaagag
     5161 ctcatcaaga aaatcaactc agccatcttc ccaggcatcc aaggtggtcc attagagcat
     5221 gtcattgctg caaaagccgt atctttcaaa gaagttttgg acccagcttt caaagactat
     5281 gctcagaaag tgattgaaaa cagcaaggcc atggccgaag tcttccttgc aaaccctaac
     5341 tttaaagtca tcacaggagg aacagacaac catctcttcc tcgttgacgt gaccaaagtt
     5401 gttgaaaatg gtaaagttgc tcagcatctc ttggatgaag taaatattac tctcaataaa
     5461 aactcaattc cttacgaaaa actctcacca ttcaaaacga gcggtatccg tattggctct
     5521 gcggccatta ctgctcgcgg ttttggagta gaggaagctc gcaaggttgc acaactaact
     5581 atcaaagcac ttgaaaatgc agaaaatgaa aaagctcttg aggaagtccg tcaagaagtg
     5641 cgtgctttga cagatcaatt cccactttac gaaggttcat aatggatata tttgtaaaaa
     5701 aagccatcat acatcaattt agtcctgatg atacagagct ggtccttgcc gaccagcttt
     5761 tgactgttag cccaaaaata gaagaatatt tgcgtaaaaa gattgaacgt gtcttttctg
     5821 atgaagcaaa aacaggacaa tttaaccccg acaatccttt tcttgactat ttagatggtg
     5881 acctactgac caactctgtc aagattgcca atctctggaa agaagaattt tcaatttctg
     5941 agaatttaaa aaccaatgac ctcattttca tagagtttga acgaaatggt gttgaacatt
     6001 ttgccttttt gagaatctca ctgcgtgaaa atctcgccca cgttggtctg gaaagcggaa
     6061 gtcctttaaa aatcacccag aataatttac ctggagcagg ttcagcacct gatgaagcct
     6121 tgattgtcaa tcttcaaacg cggaagtatc atttgattga gaaaagaatc aaacacaatg
     6181 gagccttcct caattatttc tcagataatc ttctgcaagt tacaccagct atttctgcaa
     6241 aaaaatcaat caaagcagta gagcaaactg cacagaagat tgctgacaat ttccatcaag
     6301 gcgattttca atttcaatcg aaagtcaagt cagctatttt caacaatttg gaagaagata
     6361 atgagctttc acccgaaaaa ttggctgatc agttattcga taacaacctg accgctcgtt
     6421 taaatttcgt cgatcaactg aaagaggtca tacctgataa gatttccttc gatgaaattg
     6481 atagtagccg tcaacttaag aaatttgaaa atcagaagct atctttatca aacggaattg
     6541 agttgattgt gccaaatgca atctatgagg atgcagaatc ggttgagttt attcaaaatg
     6601 acaacgggac ctattctatt cttatcaaaa atattgaaga cataaagagc aagtaaatga
     6661 aaaaactgat acgtacgctg atacttcttt tgctgatttt tctcggttac aaattctatc
     6721 aaacctacag tgcagtcaag caagtgatga cctatcaaac tatggtacaa gaagtattgg
     6781 ctgaaaacga cacaccagct aatgaagaac tagtcctagc aatgatttac acagaaacca
     6841 agggacaaga agcagatgtc atgcaatcaa gtgagtccgc tactggctat gctaacacta
     6901 tcacggatag tagagagagt atcaggcaag gaattatcta cctaacagaa aacctacggt
     6961 tggctgagga aaaaggagta gaggtttgga cagcagttca ggcatataat ttcggtccag
     7021 cctacatcga ctatattgct gagcatggtg gagaacatac actctcttta gctaaagaat
     7081 actccagaac agtagtagca ccaagcttag ggaatactac agaagaaaca tatacctatt
     7141 ttcatccctt ggctttgcta aatggtggga agttatatgt aaatggtgga aatatctact
     7201 atgctagaca ggttcgtttt aatatgcacc tgatgcgcct cattaattta ttttaatacc
     7261 tatcaaactc atcggaaatc tgatgagttt ttaactacag catttttaca aactaggtaa
     7321 aattgtagta taataaagag aataggagac agagtgatga aacgaaatgt attgattaca
     7381 ggtgcaagta gtggtattgg caaagcaatc gcttatgtgt ttgctgctaa tggtgataat
     7441 atcatcatta caggacgaag attggacaaa ctagaagaaa ttaagcaaga tattgaaagg
     7501 caataccatg ttcaggtatc cgttcattca tttgatatta cgaatatgga acaaacaatt
     7561 gtaaattgtc aaaaaatctt agaagaagtc ggacaaattc atattttggt aaacaatgct
     7621 ggtctggcat tgggattgga caaattccaa gactatgatt tgactgacat gatgacaatg
     7681 attgatacca atattaaagg attactaact gtgacacgtc agttattgcc acaaatggtt
     7741 gaaaataatg agggtcatat catcaatatt ggatcaacgg ctggtattta cgcctatgca
     7801 ggagctgctg tctatgctgc aaccaaatca gctgtcaagg tgctttcaga cgggatccgt
     7861 attgacacga ttgataaaaa tatcaaggta actacgttac aacctggtat cgttgagact
     7921 gattttagcc aagtccgttt tcatggagat aaagagagag cagcgacagt ctatcaagga
     7981 attgatgctc ttcaagcaaa tgatattgcc agctgtactc tatttgttgc aaatcaacct
     8041 gcacacgtgc agatttctga tatgaccatt atggcaacca agcaggcaac tggctttact
     8101 attcatagag attagagggg agatagctag aatgaacaga aaatatttag cactcgctct
     8161 tggcttgctc actatcatgt cgctttctgc ctgtcaaact gaaaagaagg gcagttccgc
     8221 aagtacctca actgctgata cccaggtttc taatgccaat acaagcacgt catcaacaat
     8281 ccaacgtgag atttctctta gttctatgga tatagatgct ctaatgcaag gcaattacga
     8341 tagtatacta ggcacctggc aaaatagcca aggaaattca ctagtcttca atagcaaagg
     8401 attagtagca gatagccaat ccttacttgg ccgcggaaaa ataactgacg gaatttttga
     8461 aacaggctat gtagacgcaa cgattggcga tgtaacacta ttaatgattc ctaaaggaac
     8521 acaagcaaat acaactgaga cagacactac tgactctacg cgcgatagaa tgattgtaat
     8581 aagccaagaa acaacagcag acgtggtaga tgtctattat cgcttgacca attcagccac
     8641 tagcggtata gacccattaa aaaatactga aacaggcgta cagttggata gtggaccaaa
     8701 gacgattgat tatgccaact caattttagg cgaaaacaat tggcgcgtca ttgaaggtaa
     8761 ctacacgcgc accgaatcta ttccttataa tattttggaa ggcgatgata atgcccgtta
     8821 cactatttac caaaacggtg ttattatcaa tgcagattat caaattgttt atcaaccata
     8881 atgattctct aggaggttag acatgacatt cacatcattt gaaccaacac gcaatgtgca
     8941 agattttcat ttggcagcct ttgcctacta tgatggacta gatgtaatcg accaactcaa
     9001 gccaggaaca cctgttcagc tagtcggaga gccttcaaac ccacatgact cagaagctgt
     9061 agcaatcttt tatcagggca caaagttagg atatatccca tcggataaaa actcactaat
     9121 cagtcgctta atctattttg gacacggcga tattctagag gcacgtattc agatgaccaa
     9181 tacagaaaat catcctgatc gccagtttcg agtcgttgta aaactaaaag ataatcgtaa
     9241 aaatgatagt cggtaattta ccaacctacc cattttctac ttaacacgga gctgtgctct
     9301 ctgtttttgt tcttcaataa tgcttaaaaa ggctgcaaac tccctatcca ggcgatgttg
     9361 gtaggcctta ttttttattg tgagatcttc caggaacact ggataggttc cttttttata
     9421 caattctccc tgaaagaaga agcggtccga taatttatca actgaaacaa gagaagaacg
     9481 ccagcggctt ttacgagagt gagaaggttt ccaagatatt tttaattgct tctcataaaa
     9541 gtaccagccc ataatataga ttttagtaat ctgatttcgt tttctgtctt gatagaaaca
     9601 aggaactgca taaacatttc catgctttgt ttgcaaaaaa ggatggaaat cttttatctt
     9661 ttcgtattct ttctttggaa taagggttaa ttgattatcc ttaataacct tcttttcatc
     9721 aatagtatat gaataacggt aggggtcata aatggttgat tgtccacgcg ctctataacg
     9781 ctctgccatt tccttaaaaa taggtaaacg tccataacca tccatcagac tagatagact
     9841 aagtcctcgt cgattattat ttttcttcac accaagaatc tggcaggtag gccaataatt
     9901 gataggaatg gctcctaatc cgaccagaag accggcgctg tcaaaatgac tggcaaagcg
     9961 tacctcacga gtgtgaccag tctcattttt caaatcaaca aatacaggtt gcttgtcctg
    10021 ttcaaaaaca attatataat ttccagaaga ctccgtattt tctctaattg gaacggtgta
    10081 gaagtggtga aaatttggta attctagtaa ctttccaagt gttgatgttt tcataacaca
    10141 agtataacaa aaaatatttt tcaaatccac aaaaatgttt aatttgttaa acaaaaatat
    10201 aaagaagctg ggtaagacat ccatgacgac tttcccactc ccaccgttta ttcaaggata
    10261 ggtgataatt gtcttatcta ccgaatcttc taaagcctgg cgcgattctt ctgataaacg
    10321 caaatctgca agggtttgtt ctgaaaaata gtagggattt agactatcta caaatgcaga
    10381 aattgaaatg acagctttct ccaatatcag agatttttca gtgtaagcaa agggaatagc
    10441 cgaccaatca tcactctcga acatttctaa aatatctttt tgaacttgaa tttcagcctc
    10501 atttttagct gaaactagga ttgtttttag tgtagtacga aaactttcct tgtcttgcac
    10561 caagtcttcc aaggtcagca agctttcatc tgccttctca taaaaaatat ctaattccgt
    10621 ctctgacgaa gtagtcacat ggagccagtc agccttgata ctggttttca ttactgcata
    10681 ggcagaagta ttttcaaagg gactgctgcg cgtttgagga tagagaacaa tccactcttt
    10741 ctggaataga ttgtcaggtt tagctatttt cagttcctcc tcagaagctg taccaatccg
    10801 ctggctgata gcagtagtgt catctcgctg aaagaatcca atgatacgcg gattttgcgg
    10861 accaccaatg gcatcaattt ttgttcctag atcattaata atgcgtatgt tcaaggcatg
    10921 ccactgctca tttaatagtc tattttgctc ttttccgagc cagtagattc cgatacaaga
    10981 tagaccagtg gcaataagca agacaagtaa cagcactttc gagtatttca acacagccat
    11041 cacacctttc taaaacgttt tcatccatat attatcatat aaaaatataa aaagcaacta
    11101 ttttatggta ccacattaaa cggttacaca agtatataaa ttctaagttt acgacaggaa
    11161 aggccttagt tagcaaataa atactagcta aagccttttt gtactttcta ttatgattgg
    11221 agagatttta tcatcagtag aatgatttct tccagttctt cacgtttctt gattggaagt
    11281 ttgtttaact cgttcaatac attgtaattt gttgttgaat ccactacttg aaaaaaatca
    11341 gatacttcaa tttcaagagc agaaatgatt ttttcaagtg tatcaacttt tatatttgaa
    11401 ccttttgttt cgaggttgga aatatagtct attccgacct ctgctttttc acttaactgt
    11461 tgctggctca gattttttgc ttttcgaatt tggcgaacac gagtaccgat atattgtttt
    11521 aatgtcattt gatttcactc cctcattact atctaaatga tacgaggaaa taagaacgaa
    11581 tataaccagt cttcagacta aatattaatt attattttgt gtatagaaca acttttgtgc
    11641 tataatagac ttgaacaaaa atttttgttc ataaaaaaat taagagggga atcatatgag
    11701 aagaccaaaa aaagttgtcg aatctcttgc tgtaactgtc gccatcggtg catcagtaac
    11761 taatcttcag gtcaatgctg aagaaattgt aacacctgtt actgaatctg ccgaaacggt
    11821 cgttactgca acacctacta ctatttctgc tgaacaagta gagcaagcta aagaagtggc
    11881 atctgcagac gcagaagctg ttaaggtaca agatgcagtt gataaggctg ctggcgaagc
    11941 tgttgctaac gagacaaagg ctgttgagga tttgactgag gcagtagcta aggtatcaac
    12001 ggctcaagac gcacttccag ctgctgaggc tgacgttgcc actcaaacaa aagccgtaac
    12061 agacgcacaa gcagcagtaa caaaagcaga agaagttgtt gcatcacaag aaggtgatgt
    12121 tgcaaaagca caagcaactg cagatgccgc taaaactgca gaagcacaaa catcagcaaa
    12181 attggaagaa gcaaaagctc aaccagttgt aactgctgaa actgtgaaca cacaaattgc
    12241 agcaactaag agcacgattg caacaaaaga agctgaagtg gcagaaacta caacagctat
    12301 tgcagcaact gatgctaaac ttgccagtgc aaaagaagcc gttgcaaatt acaagccaac
    12361 aactgtaaca gaaacagttg caacaactaa ctatgtggaa cttacaggtg ctgaccgtga
    12421 catggaagac attgtccgtg aacagttccc agatttgaac cctgcagatt atgcccgtca
    12481 attggaaaca gtcatttttg atggtgaaga tactcagaca attgttttga caccagaaca
    12541 agctgctgaa tacaaggcaa caggttcatt tacatatgta tatgacgcta aggctgtatc
    12601 agaagaagct gcaaaagtca ttgctgaatt gcgtcgcatc aacggtatca ctttgaaacc
    12661 aatgcgtaat actactcaag aagatttgga attgaaagta acagatagtt tcgtagcttt
    12721 cacccaaaaa cgtgcccaag agttgttgac aaatttttca catggtagtt cattagtaga
    12781 cccagtaaat ggttatgata tgtcacgagt gggcgagtca ttaggtaaag acttttttga
    12841 tatgaccagt gcagggtcaa ataaaaaaaa aaatttgtct cacgctgaag tcgcttacaa
    12901 tatgatactt agttggttta gtgattatga aaacgcaacg ggtgcaaact ttgggcaccg
    12961 attccatatg ctagatgcat ctggtaatat tgctattggt atggcaactg acggtgatac
    13021 tcaatacttt gtactcctat ctgatggaca ccctcgcacc gttaattacg aacaatcagt
    13081 tgttaatggt aaattgacac agactttcaa cggtaaccgt ttgaaatact tgccaaaacg
    13141 tacgttcaac tacgtagtaa gtactgttgt tgatgacagt caagccttga aagatgctgt
    13201 agctaaactt gaagctgaaa aatcagcact tttgacacaa caagcacaag caacggagac
    13261 tttgaatcaa gcccttatct cacttgctag cttggaacaa gctaagacag atgttacact
    13321 tgcaaatact aaacgaacag tagccattgc agaagcacaa gacgcttttg ataaggcaag
    13381 tgcagccgct aaaacagcag caacaaactt gcaacaagtc cttgcatcat atgaagcatc
    13441 cctttcaagc ttgtcaacag ctaagggtga cttgaaagtc gctcaagata aattggtaac
    13501 tactcaagct aaggtagcag aattgaaaac cttgctcgct actcaagacc aattgcttgc
    13561 agacttggac gcagccaaag cacgcttgaa tgatgcgact cttgttaaga gcgaatcaag
    13621 tgcattgttg gtagaattga ccgcaaaagc taaagcatca caaactgaag cagaccgtct
    13681 agcaaccttg tttgcattgc aagagcaatt taacacagtc attactgacg atactgtgac
    13741 agcaacacca aaagatgcac caacagttaa tgaaaaacca gttcttaata tcgatgatgt
    13801 tattaaagca acgccaaaag atgaacagac agtatcagac ttgccagttg ttaaaaccga
    13861 tactgataaa gagctagatt taaccgttat tggcgaagag ggcaatgccg ataaggaaaa
    13921 aacggttgtt ggtccgacag tttataaacc acagccagga gtaactgttc aacaaacgac
    13981 tagtggagaa aaagtaactt attcacgtgt tgaacgtgct catacattgc caaatacagg
    14041 ctcagaggat aacatcgttt tgatgggcat tggatttgtc ttagctggtc taggtcttgc
    14101 aggagcaaga agacgtagac atgggtaaaa tggaactgat ttacaatatt gtgagtgtga
    14161 ggagataaat ttatgaatac ctattctaaa gaagaactca tggaaatgtt ggggtatagt
    14221 tttcaagttc tgaaagccgt aaaagattta gatgatgcta ttttaagggt gcaagataga
    14281 gcagctaata aaattacagg aaattatata aagcttcgct ctttgtataa caaagctctt
    14341 gcagttttta ttatattttg tattgtatta ggtgctctcc aaggaaaata tgcacttggg
    14401 atgcactcaa tctttcaatt tttattaatc tatgtagtat tttgggcact gttttcacct
    14461 atcttagctg taataaattt tgtttttaag tattttgcaa aaagagaatt tgtaaaagcg
    14521 gaaacaaacg acgagtcaaa cgcatatcgt caaaaaggaa gagagctact aaaagataaa
    14581 caatttcttg aatataaaag tattattccg tctacctatt tcaatatgaa tgacctttat
    14641 ctactttata gctatttgga aaactttaga gcagataatt ttaaagaagc tgccaattta
    14701 ttatctgaag agaagcatcg agacaatgtg gaatataacc aagctatgat gaaagatagt
    14761 cttctttcaa ttcaaaataa tgtacgctac caatccgtta tgcaaacaat ccaattactt
    14821 gaaacagcaa agattaggtc atctattgac tcattattct aagtaatgtg gtaaaacaga
    14881 attttgaact tcttaatatt agataaaaca gttgaattta aaattaagag atagtgaata
    14941 ataagcatca ctatctcttt ttgttacgag taatagataa aaaacgaagc ccaatctgag
    15001 cttcgtttgg agacaatttg gagacagttc aagtctatct tgattatctt cgtaccttta
    15061 tgacatatga caattcaaat actaattaaa aacaaatttc gtctgtttcc aagtttgcaa
    15121 cgctcttttg ttttcaagcg tcgggtaaat tagtctgatt gaattgctga tagagcctat
    15181 ccccaggctc tatcactccc actcaactgt tgctggtggt ttacttgtga tatcatagac
    15241 gatgcggttg acatggtcga cttcgtttac gatacggaca gagatttttt gaagaacatc
    15301 ccatggtagt ttggcaaagt cagctgtcat tccatcgaca gaagtgatag cacggatggc
    15361 gatggtgtag tcgtaggtac gaccgtctcc cataacacct acggagcgaa cgccagtatt
    15421 aaccgtgaaa tattgccaca catcgcggtc aagacccgct tttgcaattt cctcacgcaa
    15481 gatagcgtca gattcgcgaa cagtttgaag tttttcctca gtgatttcac ccatgacacg
    15541 aatggcaagg cctggtcctg ggaatggttg gcgccataca acttcatccg gcataccaag
    15601 agcagtaccg agagcacgaa cttcatcctt aaagagagta ttgagcggtt caatcaactt
    15661 gaactgcata tcttctggca gaccaccaac gttgtggtgt gatttgattg tctcagcagt
    15721 atccgttcct gactcgataa tatcggtata aagtgttcct tgcgctagga attcaacatc
    15781 agtcaacttg ctcgcttcat cgtcaaatac gtaaacaaat tcattaccaa tgattttacg
    15841 tttcttctca gggtcagata cgccagcaag taggtctaag aaacgcttag cagcatcgac
    15901 gcgaataata ttgaggccaa atttaccgcc caacatttcc ataacctgat cgccttcatt
    15961 cttacgtaga agaccgtggt caacgaagat acaggtcaat tggtcaccga tagcacgttg
    16021 aagaaggaca ccgacaacag atgagtcaac accgcctgaa agaccaagta gaactttctt
    16081 gtcaccaact gtttggcgga ttttctcgat ttcagtttca atgaagtttt ccatggtcca
    16141 gtcgcccttg gctccacaga taccaaaagc aaagtttttc aaaatgtcat tgccatatac
    16201 cgaatgacga acttctgggt ggaattggat accgtagata cggcgttccg tgttttcaat
    16261 ggcagcgtaa ggacagtcag cagaaagacc aaccaggtgg aaatcagcag gaatttcagt
    16321 tactgcatca ccgtggctca tgagtacaag ctgttcttct ggtgttccag caaaaagcgc
    16381 tgattcagtc ttcagttgaa gatttgattg accatattca cgatttccag cctcaccagc
    16441 aggaacaacc ttaccaccca atttgtgagt aatcaactgc ataccgtagc aaatacccaa
    16501 gattggaata cccaattcaa agatttctgg atcaatatca aaggcatttt ctgcgtacac
    16561 agagtttggt ccacctgaaa gaacgatacc aattggattg atagcacgaa cttcttcggc
    16621 agtaatcttg tgatttttca attctgaaaa gacaccaaat tcacgaattc gacgtgaaat
    16681 aagttggttg tactggctac cataatccaa tacaataatt ttttggacat cttgttttgt
    16741 catgtttttc cctttcgttt tgaaaaaaat tcaaatacta gtagttagtt taacataaaa
    16801 gcgaacattt tccaaatttt atttgttaaa tatctgtttt gcaaactatg agtgataata
    16861 aaaatgttag tgttcgtatt tttactgttt ttactcactt tattttaggt aatctgactt
    16921 cattgtttgc ctaggagaat tttaccaata gagtgtggcc tgaattagcc aaacgccttt
    16981 atttttggta aactagaaag gagagaaagg ctagataaat gaaagcagca tatatcacaa
    17041 ttcacgataa aattaaggaa caaatcgata acggaatctg gaaaattggt caacgtttgc
    17101 caagtgaacg cgatttagca gatgaatttg gtgtttctcg tatgacgctc cgtcaaggaa
    17161 tcacactttt agtggaagaa ggtattctac aacgcaagat tggttccggt acttatgtcg
    17221 ccagtacacg ggttcaagaa aagatgcgag gcacgacttc ctttactgaa ttagtacaac
    17281 tccaaggaaa gacgccaagc agcaaattat tgtcctatac acgaaccaaa cctaatgaaa
    17341 aagaagttga acagttaggt ttatcccgtg gcgagtatgt tattcgaatg gagcgggtcc
    17401 gctatgcaga taatgttccc gtcgtgtatg aggttgccag cattcctgaa cgcttgataa
    17461 aaaatgtccc caaagaagat gttaccaacc atttctttaa aacacttatg gacaatggtt
    17521 atcgaattgg aacgagcaaa caaaccattt ttgcgcgttt agccaatgaa aaagtggctc
    17581 aatatttaca aatttctaaa aaccaggcta ttctcgcact aaaacaagta tcttatctcg
    17641 aggatggtca agcatttgaa tttgtaaata gtcagtatgt tggggaacgt ttcgaattct
    17701 atttagaaaa caattaacat aaaaataatt atgtaaaaca ttttttaaaa tccgtaatct
    17761 ttctagtgat gacggatttt cttatttata aaatatggaa tttttgatat aataaagttt
    17821 atggaaattg aaaaaaccaa ccgaatgaat gccttatttg aattctatgc agccttgctg
    17881 acagacaagc aaatgaacta cattgagcta tattatgcag atgattatag tttggctgag
    17941 attgctgagg aatttcaagt tagccgtcag gcggtctatg ataacattaa acgaacagaa
    18001 aaattactgg aagactacga gatgaaacta catatgtatt ctgactatgt agtacgtagc
    18061 cagattttcg atgaaatact gaacaagtat ccagaagatg cttatttgaa ggaaaaaatc
    18121 gctattctaa ccagtattga taatagagaa taagaggaga agtatatggc ttttgaaagc
    18181 ttaacagaac gtttacagag tgtttttaaa aatctgcgtc gtaagggaaa aatttctgag
    18241 agtgatattc aggaagcaac taaggaaatt cgtttggcct tactagaagc cgacgttgcc
    18301 ttgccagttg taaaagattt catcaagaaa gtacgtgaac gtgccattgg tcatgaagtt
    18361 attgacactc tgaaccctgc tcaacaaatc atcaaaatcg ttgatgaaga attgacggct
    18421 gtattaggtt ctgaaacttc agaaattatc aaatcaccaa aaattccaac tatcattatg
    18481 atggctggtt tgcagggtgc tggtaaaacg accttcacag gtaagttggc taataaactc
    18541 aagcaggaag aaaatgcccg tccactcttg attgctgccg atatttaccg tccagctgcc
    18601 attgaccagt tgaagaccct tggtcaacaa attgatgtac ctgtattcga gttgggcaat
    18661 caagtccctg ccctggagat tgtacgccaa ggtttagaac aagccaaagc taatcataat
    18721 gactacgttc tgatcgatac agcgggtcgt ttgcagattg accaagccct tatggccgaa
    18781 ttgagagaaa tcaaagagtt tgctcagcca aatgaaatcc tcttggtcgt cgatgctatg
    18841 attggtcagg aagctgccaa cgttgcgcgt gagttcaatg atcaactggc tattactggt
    18901 gtgattttga ccaagattga cggcgataca cgtggtggtg cagccttgtc tgtccgtcac
    18961 attactggtc agccaatcaa attcaccggt actggtgaaa aaatcaccga catcgaaaca
    19021 ttccacccag accgtatgtc ctcacgtatt ctgggcatgg gtgacatgct gaccttgatc
    19081 gagaaggcaa gcaaagagta cgacgagaag aaatcactag aactcgctga aaaaatgcgt
    19141 gagaacacct ttgatttcaa cgatttcatt gatcagctgg accaagttca gaatatggga
    19201 ccaatggaag acctgctgaa gatgattcca ggtatggctg gtaccccagc ccttgccaac
    19261 ttgaaagttg acgagcgtga aattgcacga aaacgagcaa ttgtatcctc tatgacgcca
    19321 gctgaacgtg aaaatcctga tttgttaaca cctagccgtc gtcgtcgtat tgctaacggt
    19381 tctggaaata gctttgtcga agtcaataaa tttattaagg atttcaacca agcgaaaacc
    19441 atgatgcagg gtgtcatgtc aggcgacatg aacaaaatga tgaaacaaat gggaatcaac
    19501 ccaaataatc tccctaaaaa catgccaaac atgaacggta tggatatgtc tgctctggaa
    19561 gatatgatgg gcggtgcagg catgcctgat atgagccaac tgatgggagg agctggtatg
    19621 ccagacatgt cccaaatgtt tggaggcggt ttgaaaggta aaataggcga gtttgctatg
    19681 aaacaagcca tgaaacgcca agccaataaa atcaagaaag ccaaaaagaa gagaaaataa
    19741 tctcttcttt tttacttttt attcgaagaa gtaagataca gcgctataaa atagaagtag
    19801 caaagcagga aaaatgattt ttgaacccca acactttcca ttataacgga aatattcaaa
    19861 aatatccttt ttagtggaca atttttatat tgtccgttat aatggaaata taatagaaat
    19921 cagaggacaa gttatgaatt atatcgcaat aataggagat attgtcaatt caaaacagac
    19981 ttcaaaccgc tctagtattc aagaaaggct aaaacagcag ctaaatagaa tcaatcattc
    20041 cttcgctcag gacttcgcat cgccatttac cattacaaag ggagatgaat ttcaagcctt
    20101 atgcaagcct aacccttata tttttttaat aattgaccaa atccaactag cctttcgtga
    20161 tgaggtggag attagatttg gaattggttt gggtgagatt ctaacagcta tcgatcccaa
    20221 gctaagtatt ggagcagatg gtccagctta ttgggaagca cgcaaggcta ttgacttcat
    20281 tcacgacaac catgactatg gcaccagcaa aattgcattt tcatctgaat acaagcaaat
    20341 cgatcgtgtg attaacccct tgctaacttc tagcgatttc atcaaagcta cctggaatcg
    20401 ttcgcaaacg gatctgtttg agaccttaat ctccaaaaaa atctatcaag aagaattcac
    20461 acaaaagcca attgctgaga aaatgaaact cagtcaaagc gcctttacca aacgtttgaa
    20521 atccagcgga atcaaactct acctgcgaaa tcgccaaact gccatgaatt tgattctcca
    20581 gctcagtcag aaagaaggat agagcatgtc attttcagtc atttctagct atcttattca
    20641 acatccagtt ttaaccgcct tgcttatcgc ccacttttta agtgatttca ccttccaaag
    20701 tcaagcactg gcggatgcta aaaagctgtg tttgaaagcc cttttcatgc accttttcat
    20761 tgtttctctc cctcttctta ttctagcctt acttaccccc gttcaaaacg gagatttatt
    20821 tttttcaagt ttggctgagc catcttgcga ttgactatgt caaatatttt ctcaacaaac
    20881 accattggat aaaggactcc tgggaagctg gagcattcct agctgatcaa ttgctacata
    20941 tcatctctat catcattctt tatcacacta tcggtgtcaa tgtcacttca cactcactct
    21001 ggattgaacc aaattatctc ctcctgcaaa tcctttttat cctcctgatt agcaagcccg
    21061 tcaatattct tttcaaactc tactttggca aatatcaggt agcggaagga gaagaaaagc
    21121 agactgtgac aggtgccgga gccttaattg gtcaattgga gcgcctcata atcggaattt
    21181 ttctgcttct ggggcaatac acagctatcg ggctggtatt tacagcaaaa tccatcgcac
    21241 gctatgataa aatatctaaa agccaagcct ttgctgaata ctacttaatt ggttcgctat
    21301 ttagtatcat cagtgtccta gtattgtacg ttttattgat ttt
//
LOCUS       DASFQS010000032        21183 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.032, whole genome shotgun sequence.
ACCESSION   DASFQS010000032 DASFQS010000000
VERSION     DASFQS010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 21183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21183
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.032"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(87..896)
                     /gene="yidA"
                     /locus_tag="U1041_001003"
     CDS             complement(87..896)
                     /gene="yidA"
                     /locus_tag="U1041_001003"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HEM4768119.1"
                     /translation="MSIKLVAIDIDGTLLNSQHQITAEVHSAIQEAKKAGVKIVIATG
                     RPISGVQAILEELNLTEAGDYVITFNGGLVQDAATGEDIVKDTLTYEDYLDIESAARK
                     LMLPMHASTKEGIYTANRNIGKYTIYESTLVSAPIFYRTPEEMADKEIIKTMMVDEPE
                     ILDAAIPLLPTSLTEKYNVAKSAPFYLEITPKTVNKGQAIIHLAEKLGLTMDQTMAIG
                     DQENDRPMLEVVGNPVVMENGNPELKKIAKYITKSNDESGVAHALREWVLK"
     gene            complement(886..2199)
                     /locus_tag="U1041_001004"
     CDS             complement(886..2199)
                     /locus_tag="U1041_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM4768120.1"
                     /translation="MIEKVFRDPVHNYVHVDHELIYKLINTKEFQRLRRIKQLGTTSY
                     TFHGGEHSRFSHCLGTYEIARRITQKFEDKYPQIWDTNESLLTMVAALLHDVGHGAYS
                     HTFERLFDTDHEEMTCAIITSPETEINALLKQVSPEFPDKVASVIKHTYPNKQVVQLI
                     SSQIDVDRMDYLLRDSYFTGANYGEFDLTRILRVIRPTENGIAFKESGMHAVEDYVLS
                     RYQMYMQVYFHPASRSMEVLLQNLLNRAKLLYTSEQEFFARTSPRLLPFFEHRIRLTD
                     YLSLDDGVMNTYFQSWIDGPDRILSDLAQRYINRKVLKSITFKAEEEEALDRLRSLVA
                     DVGFDPEYYTAIHHNFDLPYDIYRPNAEKKRTQIEIYRKDETLVELSSLSPIVHSLSG
                     TIHGDSRFYFPKEMLEETGIFAPQIADFNSHIHNDHFIIGESNEH"
     gene            2298..3185
                     /locus_tag="U1041_001005"
     CDS             2298..3185
                     /locus_tag="U1041_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEM4768121.1"
                     /translation="MNNQIILLTIQVFIVALILWMLYTILSYAKKHDISLKEKFWTGF
                     GIGYVTDLLDTLGIGTFATTTTMFKLTKLVEDDRKIPATMTTAHIIPVLVEALLFITI
                     VEVDMVTLIAMAAAAFTGAFVGAKVTQKWDTKKVQRILGILLIIAACFMVYRMITNPG
                     ADLTNEVKGLTGWKLAVGIAFDFMVGMLMSMGLGNYAPELIFFSLMGISPAVALPVMM
                     LNAAMIMTAGAKQFIQSGRVNWPGVPGIIVGGVLGVLTAAFFLSNLDINNLKILVVFV
                     AAYTGFTLLRSSFVTRIKK"
     gene            3197..3583
                     /locus_tag="U1041_001006"
     CDS             3197..3583
                     /locus_tag="U1041_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HEM4768122.1"
                     /translation="MDIHLRNEINLEGQIEVVDQQFQVEVKEKDGNLYLIYSNDEAEK
                     VVIKCDEEELVMTRFSTPKSIMRFISGKEAIVTIPTPLGIQHFVTDTKRYQLNRSDQS
                     VQLQYELKGLENQQLFASYDLEISWK"
     gene            4060..6744
                     /locus_tag="U1041_001007"
     CDS             4060..6744
                     /locus_tag="U1041_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010922034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEM4768123.1"
                     /translation="MSKEQKRDLFYTQSEEQVLSSMGSSLDGLSSDEASKRLADYGRN
                     ELDEGEKRTLLAKFLDQFKDLMIIILIAAAILTVITEGSHGLTDAIIILAVVILNAAF
                     GVYQEGQAEAAIEALKNMSSPVARALRDNHVVEVDSKDLVPGDIVLLEAGDVVPADMR
                     LLEANSLKIEEAALTGESVPVDKDLSAVLAEDAPIGDRVNMAYQNSNVTYGRGLGVVT
                     NTGMYTEVGHIAGMLANADETDTPLKQNLHQLSKVLTYAVLVIAAVTMAVSVFVRGEG
                     ILPALMTSVALAVAAIPEGLPAIVTVVLSLGTQVLAKRNSIIRKLPAVETLGSTEIIA
                     SDKTGTLTMNQMTVEKVYTNGQLVDAKEALDASNTTLRVMNFANDTKVDPTGKLIGDP
                     TETALVQFGLDQNFDVREVLVSEPRVTELPFDSTRKLMSTVHQQAAGNFFVAVKGAPD
                     QLLKRVTQIEENGTIRPITDADKQAILATNKDLAKQALRVLMMAYKYVDAIPELESDV
                     VENDLVFSGLVGMIDPERPEAAEAVRVAKEAGIRPIMITGDHQDTAEAIAKRLGIIDP
                     NDTEDHVFTGAELNELTDEEFQKVFKQYSVYARVSPEHKVRIVKAWQNDGKVVAMTGD
                     GVNDAPSLKTADIGIGMGITGTEVSKGASDMVLADDNFATIIVAVEEGRKVFSNIQKT
                     IQYLLSANTAEVLCIFLATLFGWDVLEPVHLLWINLVTDTLPAIALGVEPAEPGIMTH
                     KPRGRNSSFFSGGVLSSIIYQGILQTALVLGVYGFALLYPEHSIYEEIHADALTMAYV
                     TLGLIQLVHAYNVKSVYQSVFTVGLFKNKLFNWSIPFAFLLLMATIVVPGFSNFFHVS
                     VLSPTQWLVTIIGSGLMVVVVEIVKFVQRKLGLDEKAI"
     gene            complement(7022..7411)
                     /locus_tag="U1041_001008"
     CDS             complement(7022..7411)
                     /locus_tag="U1041_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768124.1"
                     /translation="MRVIIHYPKTIKQLSSQKLPLLVDGKIAGTVTQGKILSLPITQP
                     SVTLSIRGGKKSSIQVKDGDRVQIVENSKYFTLYYFSLAIVPIALLFNLPTLVKTILL
                     ILALAITLLGQEIFPKYIINTEKSSDH"
     gene            7546..7962
                     /locus_tag="U1041_001009"
     CDS             7546..7962
                     /locus_tag="U1041_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEM4768125.1"
                     /translation="MNYLQNYILSKSSYLPSDKLFILQKELEDLDDEALNVLMMVEMR
                     QPLVALILAIFFGEFGVDRFYVGNKELGFAKLIAFAVSFVTLFILIGFLLFLGLYLWK
                     FIDCFLIMRACKEANFERLMLQIHQYKAFQHSNQTF"
     gene            8132..8620
                     /locus_tag="U1041_001010"
     CDS             8132..8620
                     /locus_tag="U1041_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM4768126.1"
                     /translation="MQTKKMSMFLFFSYLLLLTWMIVFKMDLSIVYGRYGYASINLIP
                     FAGTAVYDGVLDFPEILFNIVSFIPFGIYMEMLFRKASWVANLCLIMLVSLCFEVLQY
                     LLLLGVADITDLLANGLGGAIGINIMYVLTSIWREKAYVRMNIFCFVLTFFVILIAYS
                     AM"
     gene            8661..9788
                     /gene="queG"
                     /locus_tag="U1041_001011"
     CDS             8661..9788
                     /gene="queG"
                     /locus_tag="U1041_001011"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEM4768127.1"
                     /translation="MNIKEEIIKLSQEIGISKIGFTTADDFAYLEKSLRASQEEGRSS
                     GFEHKNIEERIRPKLSLESAKTIISIAVAYPRHLPVKPQKTQYKRGKITPSSWGLDYH
                     YILQDKMERLARGIEKLTDGLEYKAMVDTGALVDTAVARRAGIGFIGKNGLVISKEFG
                     SYMFLGELVTNLEIEPDQPVDYDCGDCNRCVAACPTSCLLGDTTMNARRCLSFQTQDK
                     GMMDMEFRKKIKTVIYGCDICQICCPYNKGISSPPVVEIDPDLAEPELIPFLDLSNGQ
                     FKEKFGLIAGSWRGKNILQRNAIIALANSNDRSAIPKLLEIIDKKQNPVHMATAIWAL
                     GQLVKQPNDEVVSFIAGISSDNDDVIAEQTAFLNMVKDLQM"
     gene            9823..10918
                     /gene="prfB"
                     /locus_tag="U1041_001012"
     CDS             join(9823..9894,9896..10918)
                     /gene="prfB"
                     /locus_tag="U1041_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775232.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEM4768128.1"
                     /translation="MDTAEIRQKIEELGKKLTSFRGSLDLEGLEEEIAILENKMTEPD
                     FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEKLAE
                     LDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFTV
                     ETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVE
                     VMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRT
                     QYGNRDQAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDH
                     RTGYEVAQVDKVMDGDLDGFIDAYLKWRIS"
     gene            11061..11753
                     /gene="ftsE"
                     /locus_tag="U1041_001013"
     CDS             11061..11753
                     /gene="ftsE"
                     /locus_tag="U1041_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012130521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEM4768129.1"
                     /translation="MGIIEMKDVSKKYGNGTTALRGVSVNVEAGEFAYIVGPSGAGKS
                     TFIKLLYREEKLDKGSLKVGKFDLAKIKKRDVPLLRRSVGVVFQDYKLLPKKTVFENI
                     AYAMEVIGEKPRNIKKRVMEVLDLVGLKHKIRSFPNELSGGEQQRIAIARAIVNNPKV
                     LIADEPTGNLDPENSWEIMNLLERINLQGTTILMATHNSQIVNTLRHRVIAIEDGRVV
                     RDEAEGEYGYDE"
     gene            11746..12675
                     /locus_tag="U1041_001014"
     CDS             11746..12675
                     /locus_tag="U1041_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768130.1"
                     /translation="MSNRFFRHFIESLKSLKRNGWMTIAAISSVAITLTLVGLFASVI
                     LNTAKLASDLEQNVRINVYLRANSTDQAETIVNEAGETVANPDYQKVYNQITALENVQ
                     SVTYSSKDEQLQKLTATLGDTWNLFQGDANPLYDAYIIDTTEPQYVKTVATEIAKIDG
                     VTEVRDGEVETERIFKLANLVRTWGLAATGLLLFTAVFLISNTIRITIISRSREIQIM
                     RLVGAKNSYIRGPFLWEGAWVGLLGAILPSVLVYSLYKMIYTSVNASLASQDLSLISM
                     NVFVPGMIGALFVIGIIIGSLGSVISMNRYLKI"
     gene            complement(12728..12880)
                     /locus_tag="U1041_001015"
     CDS             complement(12728..12880)
                     /locus_tag="U1041_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HEM4768131.1"
                     /translation="MPTLILFLIIVILFSLAIRSLIKGKGSCGDCSCDCTIKQEMNES
                     SHHRHP"
     gene            complement(12880..15024)
                     /gene="feoB"
                     /locus_tag="U1041_001016"
     CDS             complement(12880..15024)
                     /gene="feoB"
                     /locus_tag="U1041_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEM4768132.1"
                     /translation="MTKHIALAGNPNSGKTTLFNLLTGTNQRVGNWPGVTVERKSGTI
                     KKRKHLLIQDLPGIYSLSPYTPEERVARDYLIADQPAAILNVLDATNLERNLYLTLQL
                     LEMGLPIVIALNMTDALKSQGRSINSDQLSYQLGVPVQPISALKKLGISQLLHEVEKI
                     TNQQAEPIYPQYDKQFEAGLAQVIDLLSDSIPNHQKRFYAIKLLEQDQVILDQLQLNA
                     QDMLVLTEIIAILEKIYADDIEAIIVNQRYQFIEKITELVTKDSDKAFNLSDNIDRLV
                     TNRFLALPIFAAVMWLTYFLSIQTVGTMGTDWVNDVLFGELVPGLIQENLDRFEIAGW
                     LQSLVLDGIIAGCGAILGFVPQIFVLFVCLGILEDIGYMSRVAFVMDRIFRRFGLSGK
                     SFIPMLISTGCGVPGVMASRTIENEQDRKITIMTATFMPCSAKLPIISLVAGAFFPDN
                     HWIAPSAYFVGMAAIVLSGMALKKTKQFGGVASPFIMELPSYHLPKLSTVLRYAFDKA
                     LSFIKRAGTIIFVTNIIIWFSSSYNWSLQMVETDESILASIGRSFSLLFAPLGFGNWR
                     ATVAAITGLLAKETVIATFGILYKLGETTEENPELWGLLQQDYTALSAYSFLVFNLLC
                     APCFAAIGAIHREMGEAKCTWIAIGFQTGLAYASSLVIYQIGLVLIYGQLPTVWTFIA
                     IFLIITAIYSLVKKPTNTLPIVTLKTLEKGEY"
     gene            complement(15021..15491)
                     /locus_tag="U1041_001017"
     CDS             complement(15021..15491)
                     /locus_tag="U1041_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEM4768133.1"
                     /translation="MKLQNLQVGQSYLVKDCLTQDDIRKHLAHLGLKVGEEIRIISKT
                     KTNAIFQVKASRLALDREIIESLVLIEKSATEIINLSEAPIGSSAKVMDIYATGALRR
                     RLMDMGLTKNTQLFLKKVAPLGDPIEITLRGYELTLRKSEAQMIGVQITSEVRK"
     gene            15660..15732
                     /locus_tag="U1041_001018"
     tRNA            15660..15732
                     /locus_tag="U1041_001018"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15693..15695,aa:Thr,seq:ggt)
     gene            16145..17872
                     /locus_tag="U1041_001019"
     CDS             16145..17872
                     /locus_tag="U1041_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768134.1"
                     /translation="MFKLIFDYVKQHKWLYLVVVVTLIIYDITLLIPTQIIQRMVDTL
                     TKNGLTERILVQEMGLLLLVTFLNYGMGFIWHLKLFQASVNFKFDMQQRAFKKMVTMR
                     TPFYEKFRSGDVMTRFSTDVDGLMEMVGYGLMIVVYSGGMLAFIIPTMLLIDWKISFL
                     AILPMIFMAVAFFFIGRKQDLAIDANREAVAQLNNEVLEVVEGIRVTRAYSKKAAQKA
                     QFQERTKELADGGDRITTLQSLYNPLATVGLGLSTILVLVLGAGAVKSGQLSLGQVIA
                     LQLYVSSLLEPFWTLADFILVYQTGKTSFEKLQELIETGDDLEVDGSVEIAELDSISF
                     KNYSFSYPQSDRPSLQEINWTLKAGQTVGIVGKTGSGKTSLVRQLLRQYPVGQGEFLV
                     NHQSVLDFKRSSLEQKIGYVPQEHILFSKSVRENIAFGKRDSSLEEIEAAIATAAFSQ
                     DLERMSHGLDTMIGERGVSISGGQKQRISIARAFLREPDLLILDDSLSAVDARTEGQI
                     IQNIQKERAGKTNVIVTHRLSAVNHADWVLVMDEGRIVEEGRPADLLAQEGWYYEQYQ
                     RQQSQEGGE"
     gene            17872..19611
                     /locus_tag="U1041_001020"
     CDS             17872..19611
                     /locus_tag="U1041_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768135.1"
                     /translation="MKVLGFLLKQIGRVKWLFTFAVVCYLAASSLLRFAPLIIQKAID
                     GPLRALSEGQPFQESLFLQMSSQYVAMIFLGALGYYLSMRILMHSANRIAEYLRNQAY
                     DVMQRLPISYFDDKPAGKIATRIVNDTETLRNQFYGTLVNVFNSFVRLLLTYGIVFYL
                     NPSLGSALLLLIPVFIGIQFIYKKLTDKPMKDFYDARSEVNTQVNETMNGASLIQLYG
                     QEERVLAEFEATADKMRRADNQIIWAQSSSTWTLLEFLKFLVVTGILTIIGYQFLQGQ
                     SSLSPGKLFVYIDYIEGIFVSLGALVKQFPNLLRSIETGKRLMGLLEEETEPDSSAEL
                     TVTDGQVVFNQVTFAYEVGKPILKGISIQADKGETIALVGHTGSGKSSIMNLLYRFYD
                     PQEGQVLIDGKNIRDYSRESLRSHMGIVLQDPYLFTGTIASNIAMNEEEADREKIAQS
                     LEKVGAGPMLARLEKGMDEPVVEKGAAFSSGERQLIAFARTLYSDPKILILDEATSHI
                     DTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQNADQILVLDQGRIIEHGKHEELVARD
                     GVYAQMHEIQAKV"
     gene            19665..20360
                     /locus_tag="U1041_001021"
     CDS             19665..20360
                     /locus_tag="U1041_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4768136.1"
                     /translation="MKALIFDVDDTLYDQIQPFERALERHIEVAREQIEPLYLSFRRY
                     ADEVFEATAIGKMSLKDSHIYRMKHALADFGYQVSDATALAIQIDYDYFQGQIELSPV
                     FPEIFSWCQAQGIAMGIITNGPYRHQLRKIRTMGLVNWFELEHVLISGQVGITKPNPA
                     IFQLMEERLGLSGVDICYLGDSFENDVVGAKAANWKAIWFNHRKRVEPTAPYQADKVV
                     TDWDELVEVIQSF"
     gene            20514..21083
                     /locus_tag="U1041_001022"
     CDS             20514..21083
                     /locus_tag="U1041_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002925829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEM4768137.1"
                     /translation="MELPMTQAFFPIHTLETVSPELRENLATVKKNNGGYIPNLIGLL
                     ANSPTALETYQTVSGINRRSSLNPTEREVVQITAAVANGCGFCVAGHTAISIKQVKMP
                     DVILQALRQGTPIETDAKLDALARFTLAVIHEKGKVEQPLLEEFFQEGFTAENALDVV
                     LGVSLATLCNYANNLINTPINPELQAYAL"
BASE COUNT         5913 a         3896 c         4926 g         6448 t
ORIGIN      
        1 gttacctagt actaaaagta aactaaaaga ctataacaaa aagcatcgga ttttgaattc
       61 gatgcttttt ttgatatttt aagaggctat ttcagtaccc attctctaag agcgtgggct
      121 acaccgctct catcatttga cttcgtaatg tatttggcga ttttcttcaa ttcaggattt
      181 ccgttttcca tgacaacagg attaccaaca acttccaaca ttggacggtc attttcttgg
      241 tcaccgatgg ccatggtttg atccattgtt agtccaagct tctcagctag atgaatgata
      301 gcttgtccct tgttaacagt tttaggggta atttccaaat aaaatggtgc tgattttgct
      361 acgttgtact tctcagtcaa gctagtcggt agaagtggaa tagcagcatc aagaatttct
      421 ggctcatcaa ccatcattgt tttgatgatt tccttgtcag ccatttcttc aggagtgcga
      481 tagaaaatgg gtgcacttac taatgtggat tcgtaaatgg tgtatttacc gatgttacgg
      541 ttagcagtat agatgccttc cttggtgctg gcatgcattg ggagcatgag tttacgggca
      601 gcagattcga tgtcgagata atcctcataa gtcaaggtat ctttgacaat atcctcacca
      661 gttgctgcat cttggactaa gccaccgtta aaagtgatga cgtagtcacc tgcttctgta
      721 agattgagtt cttctaaaat tgcttgaaca ccggaaatgg ggcgaccagt agcaataaca
      781 attttaacgc ctgctttctt tgcttcttgg attgctgagt gtacttcagc tgtaatttgg
      841 tgttgactat ttagtagtgt accatcaata tcgatggcga caagtttaat gctcatttga
      901 ttctccaatt ataaaatgat cgttatgtat gtggctgtta aaatcagcta tttgaggtgc
      961 gaaaattcct gtttcttcta acatttcttt tgggaaatag aagcgactat cgccatggat
     1021 tgtgcctgat aaggaatgga caattggtga cagagaggat agttctacca aggtttcatc
     1081 tttgcgataa atctcaattt gagtccgttt cttttctgca ttcggtcggt aaatgtcata
     1141 cggcaaatca aagttgtggt gaatagcagt atagtattct gggtcaaacc cgacgtctgc
     1201 gaccaggcta cgcaggcggt ccaaagcttc ctcttcttcg gccttgaaag tgatggattt
     1261 gagcactttc ctattgatat agcgctgggc taagtcagat aatatacgat ctggtccatc
     1321 tatccatgat tgaaagtaag tattcataac tccatcatca agactgaggt agtcggttag
     1381 acggatacga tgctcaaaaa aaggtaatag ccgaggtgaa gttcgtgcaa aaaactcctg
     1441 ttcactagta tatagtagtt tggcacgatt gagtaaattc tgcaatagga cttccataga
     1501 gcggcttgct ggatgaaaat agacttgcat gtacatctgg tagcggctga gaacgtagtc
     1561 ttctactgca tgcataccag attccttgaa ggcaattcca ttttctgtcg ggcgaatgac
     1621 acgtaatatc ctagttaggt caaattcacc atagttcgca cctgtgaagt aggaatctcg
     1681 caatagataa tccattcggt caacatcaat ctgactcgaa atgagttgaa cgacctgttt
     1741 atttggatag gtgtgtttga taacactagc aaccttgtct ggaaactcag gtgaaacttg
     1801 tttcaacaga gcattgattt ccgtttctgg actagtaata atagcacagg tcatttcctc
     1861 atggtctgta tcaaatagac gctcgaaggt atgagaatag gctccgtgtc cgacatcatg
     1921 gagtaacgca gcaaccatgg tcagtaggga ctcgtttgta tcccagattt gtggatactt
     1981 gtcttcaaat ttttgagtaa tccgtctggc gatttcgtag gtgccaaggc agtgcgaaaa
     2041 gcgactatgc tcgccaccat ggaaggtata ggaagtagtc cctagttgct tgatgcggcg
     2101 tagtcgctga aattcttttg tattgataag tttataaatc agctcatgat caacatgtac
     2161 atagttatga actggatcgc gaaatacttt ttctatcata gtttcattat aacaaaaaag
     2221 ggagataaat tcctgatttt tctaaaacac aaggatattg ctatgtacca aatggaatct
     2281 tttggtataa tggagaaatg aataatcaaa ttatcttatt aactattcag gtctttattg
     2341 tagccctaat tctttggatg ctttacacaa ttctatccta tgctaaaaag catgatattt
     2401 ctctaaaaga gaagttttgg acaggatttg gtatcggtta tgttactgat ttgctagaca
     2461 ccttggggat tggaaccttt gcaacgacaa ccactatgtt taaactgaca aagttggtgg
     2521 aagatgatcg taaaattcct gcgaccatga caacggcgca catcatacca gtcttagtag
     2581 aggcgctatt gtttattacg atagttgagg ttgatatggt cactctgatt gctatggcag
     2641 cagcggcatt tacgggtgcc tttgttggtg ccaaggtaac tcaaaaatgg gatacaaaga
     2701 aagttcaacg aattcttggg attttactaa ttattgcagc ctgtttcatg gtctatcgca
     2761 tgattactaa ccctggcgca gatcttacca atgaagtaaa gggcttaact ggttggaaac
     2821 tggctgtcgg tattgccttt gattttatgg tgggaatgct gatgagtatg ggactgggta
     2881 actatgctcc tgagttaatt ttcttctcat tgatgggaat tagtccagcg gttgctcttc
     2941 cagttatgat gttgaatgct gctatgatta tgacagctgg tgccaagcag tttatccaat
     3001 caggacgagt aaactggcca ggagttccag gaatcattgt cggtggggtg ctaggtgttt
     3061 tgacagctgc tttcttccta tcaaatttag atattaataa tttgaaaatt ttagttgtct
     3121 tcgttgcagc gtatacaggc tttactctgc ttcgttcatc ctttgttact aggattaaaa
     3181 aatagtagga ggaactatgg atattcattt acgaaatgaa attaatctgg aggggcagat
     3241 tgaagtagtg gatcagcaat ttcaagtgga agttaaggaa aaagatggga atctttatct
     3301 catttatagt aacgatgaag ctgaaaaagt tgtcataaaa tgtgacgaag aagagttagt
     3361 gatgacacgt ttttcaactc cgaagtctat tatgcgattc atttctggta aagaagctat
     3421 tgtgaccatt cctacaccat taggaatcca gcattttgtg accgatacaa aacgttacca
     3481 attaaaccgt tcggatcaaa gtgtccagtt gcaatatgaa ttaaagggat tggagaacca
     3541 gcagcttttt gcttcctatg atttggaaat ctcgtggaaa taatctctta tttccagaaa
     3601 aatattcttg aatttctcgg gatttttgat ataatagtta acaaatcgag ggagtagcta
     3661 gcggaaaatt ccgtgatatt gtcgtcaatc cgacttgttt ccggcaatat attaaatagc
     3721 gagacttgtt ttagaacctg tcttcgcaag taaggtattt ttagataaga gatagttttg
     3781 tgtctatcaa ggcagttttt tgaaggaata ctgactgtat ttcaaaaaaa aactaatatt
     3841 caatgaaaat caaagtcagg ctaggcgacg ccgatgcaga ttgaactaaa gttcatcaat
     3901 tcaagtcaac aacgcctgag tttgattttc gaagagtata aagatgagtg acagaaaact
     3961 agccctagat agaagtgccg agctgtgaag agaggttctc attaaacagg tctctttttt
     4021 atttgttagg taaaaaaggg accgagaagg agaaggaaat tgtcaaaaga acaaaaacgc
     4081 gatttgtttt atacacagag cgaagagcaa gtattgtcaa gcatggggtc ttctttggac
     4141 ggtttgtcta gtgatgaggc aagcaaacgt ctagcagact acggtcgtaa cgaattggat
     4201 gagggtgaaa aacgcacact cttagctaaa ttcttggatc agttcaaaga cttgatgatt
     4261 attattttga ttgcagcagc aatcttgacg gtgattacag aaggttcaca cggtttgaca
     4321 gatgccatta tcatcttggc cgtggttatc ttgaacgctg cctttggtgt ttatcaagag
     4381 ggtcaagctg aggcagccat tgaggcgcta aaaaacatgt caagcccagt tgcgcgtgca
     4441 cttcgtgaca atcatgtagt cgaagttgat tctaaagact tggtaccagg tgacatcgtc
     4501 ttgcttgaag caggtgatgt tgtccctgcc gatatgcgtt tgttggaagc taactccctc
     4561 aaaatcgaag aggcagctct tacaggtgag tctgtaccag ttgataaaga tttgtcagca
     4621 gttttggctg aagatgcacc gattggtgac cgtgtcaaca tggcctacca gaactcaaac
     4681 gttacttacg gccgtggtct tggtgtggtt acaaatacag gtatgtacac agaggttggg
     4741 cacatcgctg gcatgcttgc taatgctgat gagactgata caccattgaa acaaaacttg
     4801 caccaattat ctaaggtctt gacatacgca gttcttgtca ttgctgcggt aacgatggct
     4861 gtttcagtct tcgtacgtgg agaaggtatc ttgcctgctc ttatgacttc tgtagctctt
     4921 gcggttgcgg ccattccaga aggtttgcca gctattgtaa cggttgtcct ttcacttggt
     4981 actcaagtat tggctaagcg taactcgatc atccgtaagt tgcctgctgt tgaaacactt
     5041 ggttcaactg aaatcatcgc atcagataag actggtactt tgactatgaa ccagatgact
     5101 gttgaaaaag tctatacaaa cggtcaattg gtggatgcta aagaagcttt ggatgcaagc
     5161 aatacaacgc ttcgtgttat gaactttgcc aacgatacaa aagttgaccc aactggtaag
     5221 ttgatcggtg acccaacgga aacggcactt gttcaatttg gtttggatca aaactttgat
     5281 gttcgtgaag tcttggtttc tgagcctcgt gtgactgaac tgccatttga ctcaacacgt
     5341 aaattgatgt caactgttca ccaacaagct gctggaaact tctttgttgc tgttaaaggt
     5401 gctccggacc aattgctcaa acgtgtaacg caaattgaag aaaatggtac aatccgtccg
     5461 attaccgatg cggataaaca agccattctt gccactaaca aggacttggc taagcaagcc
     5521 cttcgtgtct tgatgatggc atacaagtat gttgatgcta ttcctgagtt ggaatctgac
     5581 gttgttgaaa atgaccttgt cttctcaggt ttggttggta tgattgaccc tgagcgtcct
     5641 gaagcggcag aagctgtccg tgttgctaag gaagctggta tccgtccaat catgattacg
     5701 ggtgaccacc aagatacagc tgaggcgatt gccaagcgtc ttggtatcat tgatccaaat
     5761 gatacagaag accatgtatt tacaggtgca gagctcaacg aattgacgga tgaagagttc
     5821 cagaaagtct tcaagcaata ctctgtgtat gcgcgtgtat ctccagaaca taaggttcgt
     5881 atcgttaagg cttggcaaaa tgatggtaag gttgttgcca tgactggtga cggtgttaac
     5941 gatgcgccat cacttaagac agccgacatc ggtatcggta tgggtatcac aggtacggaa
     6001 gtttcgaaag gtgcctctga tatggtcctt gcagatgaca actttgcgac tattatcgtt
     6061 gcggtggaag aaggacgtaa ggtcttctca aacatccaaa aaaccatcca gtacctcttg
     6121 tctgctaaca cggcagaagt attgtgtatc ttccttgcaa ccctcttcgg ttgggacgtg
     6181 ttggagccag ttcatcttct ttggatcaac ttggtaacag atactcttcc agcgattgcc
     6241 cttggtgttg aacctgctga accaggtatt atgacacaca aacctcgtgg acgcaattca
     6301 agcttcttct caggtggtgt ccttagctct atcatctatc aaggtattct acagaccgct
     6361 ttggtattgg gtgtctatgg atttgccctg ctttacccag aacacagcat ttatgaagaa
     6421 atccatgcag atgctttgac aatggcttac gtgacattag gtttgatcca actggttcat
     6481 gcatacaatg ttaagtctgt ttatcagtcc gttttcacag ttggtttgtt caaaaataaa
     6541 ctcttcaact ggtcaattcc atttgctttc cttttgttaa tggcgacaat cgttgttcca
     6601 ggatttagca atttcttcca tgtatccgtt ctctctccaa cccagtggtt ggtaaccatt
     6661 attggttcag gcctcatggt tgtcgttgta gaaattgtta aatttgttca acgtaagttg
     6721 ggattggatg aaaaagctat ctaatatagt tattcagctt atcttttatt acttcgttaa
     6781 ctcgccttgg gagtgggaaa gaactcaact agtcaaaaaa gagttcgtct tcccaccccc
     6841 gcacagttga ttaggtcaga tttagagtgt gaaacacgaa caaatctgcc aatcaaccac
     6901 tgcgctgaga tgttgacacg aactctgaga agtggctttg gactttttgc ccagcctcct
     6961 gcgcctcgtt gccttgcact aaaaccaaac tgaagactat atcatttgaa aaagctcaga
     7021 tttagtggtc tgagcttttt tctgtattga taatgtattt tgggaagatt tcttgtccca
     7081 ataaagtaat ggctagtgct agtatgagga ggatggtttt gacaagagtt ggtaagttaa
     7141 acagtaaggc gattggtacg atagccaagc tgaaatagta gagagtgaag tatttgctat
     7201 tctccactat ttggacccta tcgccgtctt taacttgaat gcttgatttt ttaccccctc
     7261 gaatgcttag tgtaacagat ggttgtgtaa ttggtaagct tagaatttta ccttgagtaa
     7321 ctgtcccagc aatttttcca tctaccagaa gcggaagctt ttgggaggat agttgtttga
     7381 tagtttttgg ataatgaata ataactctca tatgaacctc cttgtaatcc agtttcatta
     7441 tagcaaaaaa atggaaaaat gtaaacgatt tctgacgctg ttttccccta caggcttgct
     7501 tgaagaataa gaaactgcta taattttgaa gaggtaggag tttatatgaa ttatcttcag
     7561 aattatattt taagtaaaag cagttatttg ccatctgata agttattcat tctgcaaaaa
     7621 gaactagaag atttagatga tgaggcttta aacgttctta tgatggttga gatgcgtcaa
     7681 cctcttgtcg ctcttatttt ggctattttc ttcggtgagt ttggtgtcga ccgtttttat
     7741 gtcgggaata aagaattggg atttgccaag ctgattgctt ttgcagtatc ttttgttacg
     7801 ctatttatct tgattgggtt cttgttattt ttgggacttt atttgtggaa gtttattgat
     7861 tgcttcttaa tcatgcgagc atgtaaggaa gcgaactttg agcgtttgat gctacaaatc
     7921 catcaatata aggcttttca gcatagcaat cagacatttt aagtaagata tttttgggaa
     7981 taaggggagg cttggtagtg tcttcctttt ctgtttttag taggctgtaa agtacttgta
     8041 atatggaacg agctttgtca cagaagtgac attttataga acagcattta tgatataatg
     8101 ataaaatatg ctagttgaga ggagaatttc tatgcagaca aagaaaatga gtatgttttt
     8161 atttttttcc tatctccttt tacttacttg gatgattgtc tttaagatgg acttgagcat
     8221 cgtatatgga cgctatggtt atgctagtat aaacttaatt ccgtttgcag gaacagcggt
     8281 ctatgatgga gtgctggatt ttccagaaat tctatttaat attgtaagtt ttattccctt
     8341 tggtatttat atggaaatgc tatttcgcaa ggcatcgtgg gtggctaatc tatgtttgat
     8401 tatgttagtg agtctctgtt ttgaggttct gcaatatctt cttttgcttg gggttgcaga
     8461 tataactgat ttactggcta acggcttagg gggagcaatc ggtattaata tcatgtatgt
     8521 cttgaccagt atttggcggg agaaggccta tgttcgtatg aatatttttt gttttgtgct
     8581 aacgtttttt gttatattaa tagcttattc agctatgtag gttttgctaa atatatccaa
     8641 agtttgctaa aatgaatata atgaatatta aggaagagat tattaaatta tctcaggaaa
     8701 tcggaatctc gaagattggt tttacaacgg ctgatgattt tgcttatttg gagaaatcac
     8761 ttcgtgctag tcaggaagag gggcgttcgt caggatttga acacaagaat atcgaagaac
     8821 gtatccgtcc caaactgtcg ttagaatctg ccaaaaccat catttctatc gcggtagctt
     8881 atcctcgaca tttgcctgtc aaaccgcaga agacccaata caaacgtggg aagattaccc
     8941 ctagttcatg ggggcttgat taccactata tcttgcaaga taagatggag cgtttggcac
     9001 ggggaattga gaaactgacg gatggtttgg aatacaaggc tatggtagat acaggagctt
     9061 tggtggatac agcggtcgct cgtcgtgcag gaattggctt tatcgggaag aatgggctag
     9121 tcatttctaa ggaatttggt tcctatatgt ttctaggaga attagtgacc aatctagaaa
     9181 tcgaaccaga tcagccagtc gactacgact gtggggactg taatcgttgt gttgcagcct
     9241 gtccgacgtc ttgtctatta ggtgatacga ctatgaatgc ccgtcgttgc ttgtcctttc
     9301 agacccagga taagggtatg atggacatgg agtttcgtaa gaaaatcaag acggtcatct
     9361 atggttgtga tatttgccag atttgttgtc cttacaacaa gggaatttcc agtccgcctg
     9421 tggtggagat tgatccagat ttggctgagc cagagctgat tccctttttg gatttgtcga
     9481 atggacagtt caaggaaaaa ttcggtctga ttgctggttc ttggagggga aaaaatattc
     9541 tccagcgcaa tgccatcatt gccttagcta atagtaatga tcgctctgcc attcccaaac
     9601 tcctagaaat catcgataaa aaacaaaatc cggtccacat ggcaacggct atctgggcct
     9661 tggggcaatt ggtcaaacag cccaatgatg aggtggtttc ctttatcgca ggtatttcat
     9721 cagacaatga tgatgtcata gcagagcaaa cggcctttct caacatggtc aaggacttgc
     9781 aaatgtgata taataaatat tatgaataaa aatgaggtgt atatggatac agcagaaatt
     9841 cgccaaaaga ttgaagaact tggcaaaaaa ttaacttctt ttagggggtc tctttgactt
     9901 agaaggtcta gaagaagaga ttgccattct tgagaacaag atgacggagc cagatttctg
     9961 gaatgataat ttggcagccc agaagacgtc tcaggagttg aatgaattaa aaaacaccta
    10021 cggaaatttc catcagatgt tggatttata tgatgaatcc gaaattttgc tagattttct
    10081 agcagaagat gagtctgttc gggatgagtt ggttgaaaag ttagcggaat tggacaaaac
    10141 catgactgct tatgaaatga ccttgctctt gtcagaaccc tatgatcaca ataacgctat
    10201 cttggaaatc catccaggtt cgggtggtac cgaggcacaa gactggggag aaatgctcct
    10261 gcggatgtat cagcgttatg gaaatgccaa aggttttaca gtagaaacat tggattatca
    10321 agctggtgat gaggcaggta ttaagtccgt gactctaagc tttacaggtc caaatgctta
    10381 tggtttgctt aagtcagaaa tgggtgttca tcgtttggtg cgtatctcac cttttgactc
    10441 agcaaaacgt cgccatactt cctttacatc tgtagaggta atgcctgagt tggacgatac
    10501 cattgaaatt gaaatcagag atgatgaagt gaagatggat accttccgct caggtggtgc
    10561 cggtggacag aacgtcaaca aggtttcaac aggtgtgcgt ttgacccata ttccgacagg
    10621 tattgtgact cagtcaactg ttgaccggac ccagtatggc aaccgtgatc aagctatgaa
    10681 actcttgcaa gctaaattgt atcaattgga gcaggagaag aaggctgcag aggtcgactc
    10741 actcaagggt gacaagaaag agataacttg gggaagtcag attcgttctt atgtctttac
    10801 accttataca atggtaaaag accaccgtac tggttatgag gtggctcaag tcgataaggt
    10861 tatggacgga gacttggacg gctttataga tgcttattta aaatggcgaa ttagctaaga
    10921 acctgtattt acaagtgaag tgcttataaa taagagatag tttttcgctc atcaaggaag
    10981 ttttttgaaa gaatacggac tgtattttga aaaaaacgtt ctcaaatcta aagaaaggac
    11041 tgtctaagac aggaaatcct atgggaataa tagaaatgaa agacgtttcc aagaaatatg
    11101 gaaacggaac gactgccctt cgcggagtat cagtcaatgt tgaagcggga gaatttgcct
    11161 acattgtagg tccttctggt gcaggtaagt caacctttat caaactcttg tatcgggagg
    11221 aaaagctcga taaggggagt ctaaaggttg gtaagtttga ccttgcaaaa attaaaaaga
    11281 gagatgttcc tcttctacgt cgtagtgtag gagtggtttt ccaagactac aaactcttac
    11341 ctaaaaagac tgtctttgaa aatattgctt atgcgatgga agttatcggt gaaaaaccac
    11401 ggaatattaa gaaacgtgta atggaagttt tagatttggt tggtttgaaa cacaagattc
    11461 gctctttccc aaatgaactt tcaggtggtg agcaacagcg gattgctatt gcccgtgcca
    11521 ttgtaaataa tcctaaagta ttgattgctg atgaaccaac tggtaacttg gaccctgaaa
    11581 actcttggga aatcatgaat ctattggagc gaattaactt acaggggaca acgattttga
    11641 tggcgacaca caatagtcag attgtaaata cacttcgtca ccgtgttatt gcgattgaag
    11701 atggtcgtgt agtacgtgat gaagcggaag gagaatatgg atacgatgag taatcgattt
    11761 tttagacact ttattgagtc attgaagagt ttgaagcgaa atggttggat gacgattgca
    11821 gccatttcat ctgtagccat tacccttacc ttggttggtc tatttgcttc agttattttg
    11881 aacacagcaa agctcgcttc ggatttggaa cagaatgtac gtatcaatgt atacttgaga
    11941 gcgaactcaa ctgatcaagc tgagacgatt gtgaacgaag caggagagac ggtagctaat
    12001 ccagattatc aaaaggtgta caatcagatt acagccttag aaaatgtaca atctgttact
    12061 tattcaagta aggatgaaca gttgcagaaa ttaacagcta ccttgggaga tacttggaac
    12121 ctattccaag gagatgccaa tccactttac gatgcttata tcattgatac gactgaaccg
    12181 cagtatgtaa aaactgttgc aacagagatt gctaaaattg atggtgttac agaggtacgc
    12241 gatggggaag ttgaaacgga acgtattttt aaattagcta atctagttcg tacatgggga
    12301 ttggcagcaa ctggcttatt gctgtttact gctgttttct tgatttccaa tactattcgg
    12361 attaccatta tttctcgtag ccgtgaaatt cagattatgc gtctggttgg tgctaaaaac
    12421 agttatatcc gtgggccatt cctctgggaa ggtgcctggg taggtctcct cggagctatt
    12481 ttgccttctg ttttagtcta ttctctttat aagatgatct atacttcagt aaatgctagt
    12541 cttgctagtc aagatttgtc tctgattagt atgaatgtct ttgttccagg aatgattggc
    12601 gcactttttg taattggtat tattattggt tccttgggat cagtcatttc catgaaccgc
    12661 tacttaaaaa tttaatagac aagctacatg taaaaaggtc tgcacaataa tgaggcagac
    12721 ctttttgtta tggatgtcta tggtgagaag attcgttcat ctcttgctta atagtacagt
    12781 cgcaggaaca atctccgcag gatccttttc ctttgatgag actgcgaata gcaagagaaa
    12841 ataagatgac gatgatgaga aagaggataa gtgtgggcat taatattctc ctttttctaa
    12901 tgtttttagc gtgacgattg gaagagtgtt ggttggtttt ttcactaggc tgtagatagc
    12961 tgtgataatt agaaagatag cgataaatgt ccagacggtt ggtaattgtc cgtagataag
    13021 tacaagacca atctgataga taaccaaact acttgcatag gctaaacctg tttggaaacc
    13081 gatagcaatc catgtacact tggcttctcc catttcacgg tgaatggcac caatagccgc
    13141 aaaacaaggg gcacagagga gattgaagac taggaaggag taggctgata acgctgtata
    13201 gtcttgttgt aaaagccccc agagttcggg attttcttcg gttgtttctc ctaatttata
    13261 gaggatacca aaggtggcaa tgacggtttc cttggctaag agacctgtaa tggctgcaac
    13321 agttgctcgc caatttccga aaccaagtgg ggcaaagagg agagaaaaac tgcgtccaat
    13381 ggaggctaag atactctcat ctgtttctac catttgtaaa gaccaattat aggaactgct
    13441 gaaccaaata atgatgttgg tcacaaatat aatggtacca gctcgcttga taaaactaag
    13501 tgccttatcg aatgcatatc ggagaaccgt actgagtttc ggtaagtgat aagatggtaa
    13561 ttccatgata aaggggcttg cgactccacc gaactgcttg gtctttttta gtgccattcc
    13621 ggataggacg atggcagcca taccgacaaa ataggcgctt ggagcaatcc aatgattgtc
    13681 aggaaagaaa gcaccggcta ccagcgaaat gataggaagt ttggcagaac agggcatgaa
    13741 ggttgcggtc ataatggtga tttttcggtc ctgttcattt tcaatagtcc ggcttgccat
    13801 gactccagga acgccacagc ctgtggaaat caacatggga ataaaggatt tgcctgatag
    13861 accaaaacgt ctaaaaatcc tatccatgac aaaggcgact cggctcatat agccgatgtc
    13921 ttccaagatt cccaagcaga cgaagaggac gaaaatttgt ggtacaaaac ctagaatggc
    13981 tccgcatcct gcaataatgc catcaaggac cagagattgt agccagccag cgatttcaaa
    14041 tcgatctaga ttttcctgaa taaggcctgg aacaagctct ccgaagagga catcatttac
    14101 ccagtcagta cccattgtac caaccgtttg aatagacagg aagtaggtca gccacatgac
    14161 tgccgcaaag atagggaggg caagaaaacg attggtaaca agtcggtcta tgttatcaga
    14221 caggttaaag gccttatcgc tgtcttttgt gaccagttct gtgattttct cgataaattg
    14281 gtagcgttga ttaacgataa tggcttctat atcgtctgcg taaatttttt ccaaaatggc
    14341 aatgatttcg gttaaaacaa gcatgtcttg cgcattgagt tgtaattggt ctagaatgac
    14401 ttgatcttgt tcgagtagct taatggcgta gaagcgtttt tgatgatttg ggatggaatc
    14461 cgataatagg tcaataactt gggcgagacc ggcttcaaat tgtttgtcat actgaggata
    14521 gattggctcg gcttgttgat tggtaatttt ttctacttca tggaggagct gggatatacc
    14581 tagctttttt agtgcactga taggctgtac aggaactccc agttgatagg agagctggtc
    14641 gctgtttatt gagcgacctt gacttttcag ggcgtctgtc atattgaggg cgataacaat
    14701 aggaaggccc atttctaata actgcaaggt cagatagaga ttccgctcca agtttgttgc
    14761 atcaaggacg ttgaggatag cagctggttg gtccgctatc aaataatctc tggcaacccg
    14821 ttcttctggt gtgtagggag acagcgagta gatacctggt aaatcttgaa ttagtaaatg
    14881 ttttcgcttt ttgatggttc cagattttct ttcaacggtg actccaggcc agttaccgac
    14941 acgttggttg gttcctgtta ggaggttgaa aagagttgtt tttccgctat ttggatttcc
    15001 tgcaagggcg atgtgttttg tcatttcctc acctcgcttg tgatttgaac accaatcatt
    15061 tgcgcttcgg atttgcgtag tgtcagctcg tatcctctca aggtaatttc gattggatcg
    15121 cccaggggag cgactttttt gagaaatagc tgcgtgttct ttgtaagtcc catatccatg
    15181 aggcgacgac ggagtgcacc tgttgcatag atgtccatga ccttggctga gctaccaata
    15241 ggtgcctcgg atagattgat tatttccgta gctgactttt ctattaaaac cagagattca
    15301 ataatttctc tgtctagggc tagacggctt gccttgactt ggaaaattgc attggtcttg
    15361 gtttttgaaa tgatgcgaat ctcttctccg acttttaaac ccaagtgcgc taagtgttta
    15421 cgaatatcat cttgcgttag gcaatctttg actaaataag attgtccaac ttgaaggttt
    15481 tgcagtttca tatcgtttcc tttgtgattt ttataacaat agtatagcac aattccttaa
    15541 aagtgtcaga taatttttag gaatagctta ttttctcttt attttgctct ttatttttct
    15601 caatatttcc aaaaaatcca ttgacttttt ttagagatat gatatactag tcaggtactg
    15661 ctggtttagc tcagtcggta gagcgcatcc atggtaagga tgaggtcgcc ggttcaatcc
    15721 cggcaactag cataaaataa cgttgaaaac ccttgaaaca caagggtttt tgttgtgtct
    15781 gccccaaatc tgcccctaat atcaaaaaaa tcttgacttg tcagtttatt atgttagaat
    15841 agggcttaga aaaaagaaag gagtaaaaca aatgaacaca caacttgtcc ttcagcaagc
    15901 tattttttat catacactcc tttctaagca ggaaaacagg gctcattgaa agacttttga
    15961 agttttcgtg ggcctactct ggaatagtgg gaaagtcaag catgtcttat catggtcagg
    16021 tgggcttttc agggctattc gagggttggt ctatttttgt ggactgaggt atgactgggt
    16081 ggagtgatag acacctaggc ttttttgtgc ttagaaagga atagttttaa cttaaaggag
    16141 aaatatgttt aaattgattt ttgattacgt caagcaacac aagtggctct acttggtggt
    16201 tgttgtgacc ttgattattt acgatatcac cctcttgata ccaacgcaga ttattcagcg
    16261 gatggtggat acgctgacca agaatggctt aactgagcgc attttagttc aagagatggg
    16321 actcttgctc ttggtgacct ttctcaatta tgggatgggc tttatctggc atcttaagct
    16381 ttttcaggcc tcggtcaatt tcaaatttga tatgcaacaa cgagccttta aaaagatggt
    16441 gactatgcgg acaccttttt atgaaaaatt tcggtctggg gacgtcatga cccgcttttc
    16501 tacggatgtt gatgggctga tggagatggt cggatacggg ctcatgattg tggtctattc
    16561 cgggggtatg ttagcattta tcattcctac catgcttttg attgactgga agatttcctt
    16621 ccttgctatt ttaccgatga tttttatggc agttgctttc tttttcattg gtcgcaagca
    16681 ggatctggct attgatgcca accgtgaggc agttgcacag ctcaataatg aggttttgga
    16741 agttgtcgag ggtattcgtg taacccgggc ctatagcaaa aaggcagctc aaaaggctca
    16801 gtttcaggag cgaaccaagg aattggcgga tggtggggac cggattacta ccctgcaatc
    16861 cctttataac cccctggcta cggtcggtct gggtttgtcg actatcctgg tcttggtgct
    16921 tggagcaggg gcagtcaagt ctggtcagct cagcctgggg caggtcatcg ccctccaact
    16981 ctatgtcagt tccctcctag agcctttctg gaccctggcg gatttcatac tggtttacca
    17041 gactggtaaa acttcatttg aaaaactgca ggagctgatt gaaacaggag atgacttgga
    17101 agtggatggc tcggtagaaa tagccgagct ggatagtatt tctttcaaga actacagctt
    17161 tagctatcct cagtcggacc gtccgagttt gcaggagatt aactggacct tgaaagccgg
    17221 tcagacagtc gggattgttg ggaaaacggg ttccggcaag accagcttgg ttagacaatt
    17281 gttacgtcag tatccagttg ggcagggaga gtttcttgtt aatcatcagt ctgtcctgga
    17341 cttcaaacgc tcaagcctgg agcaaaaaat tggctatgtt ccccaagaac acattctctt
    17401 ttcaaaatca gttagggaaa atattgcctt tggtaagcgt gacagtagtt tggaagaaat
    17461 tgaagcggct atcgcaaccg cagcctttag ccaggactta gagcggatga gtcatggact
    17521 ggacaccatg attggcgagc ggggtgtgtc tatttctggt ggtcagaaac aacggatttc
    17581 tattgcgcgt gcctttttac gagagccaga cttgctcatt ttagatgatt ccctgtcagc
    17641 agttgatgct cgaacagaag gccagattat ccaaaatatc cagaaagaac gtgcaggcaa
    17701 gacaaatgtc attgtgaccc accgcctgtc tgctgtcaac catgcggact gggtgctagt
    17761 catggacgag ggtcgcattg tcgaagaagg acgaccggcc gacctgctag cccaagaagg
    17821 ctggtactat gaacaatacc agcgccaaca aagtcaggaa ggaggagaat aatgaaggtt
    17881 ttaggatttt tattgaagca aattggtcgc gttaagtggc tctttacgtt tgctgtagtc
    17941 tgttacttag cagcttctag cctcttgcgt tttgccccac ttattattca aaaagccatc
    18001 gatggacctt tacgggcctt gagtgaaggc caacccttcc aagaatccct tttcttgcag
    18061 atgtcaagtc aatatgtggc catgattttc ttgggtgcac ttggttatta cctctccatg
    18121 cgaattttga tgcactctgc caataggata gcagagtatt tgcgcaacca ggcctatgat
    18181 gttatgcagc gcctgcctat ttcttatttt gatgacaaac ctgccggaaa gattgccact
    18241 cgtattgtta acgatactga aaccttgcgc aatcagtttt acggtactct tgttaatgtc
    18301 tttaatagtt ttgttcgctt gcttcttacc tacgggattg ttttctacct caatcctagt
    18361 ctaggttctg ctctcttgct actaattcca gtctttatcg gtattcaatt tatctataaa
    18421 aagttgacag ataagcctat gaaagacttt tacgatgcgc gaagcgaggt caatacacag
    18481 gtcaatgaaa ccatgaatgg tgctagtttg atccagctct atgggcagga agagagagtg
    18541 ctagctgagt ttgaagcgac agcagataag atgcgccgtg cggataacca gattatctgg
    18601 gcccaatcca gctcgacatg gaccttgttg gagtttctga aatttctggt tgtgacaggg
    18661 attttaacca ttattggcta tcaattttta caaggtcaat cgagcttgtc accgggtaaa
    18721 ttatttgtct atattgatta tattgaaggg atttttgtgt cccttggtgc cttggtcaag
    18781 cagtttccaa atctccttcg gtcgattgaa acaggtaaga ggttgatggg cttgctggaa
    18841 gaagaaacgg agcctgatag tagtgctgaa ttgacggtga cagacggtca ggtggtcttt
    18901 aaccaagtga cctttgccta cgaagttggc aagcctattc tcaagggcat ctccattcag
    18961 gctgacaaag gagaaaccat tgctctggtg ggccacacag gatcaggcaa gtcctccatt
    19021 atgaacctcc tctaccgttt ctatgatcct caggagggtc aggttttgat tgatgggaaa
    19081 aacatccgtg actattcaag ggaaagcctg cggagtcata tggggattgt cctacaagat
    19141 ccttatctct tcaccggcac aatcgccagc aacatagcca tgaacgagga agaggcggat
    19201 agggagaaga ttgcccagtc gcttgaaaaa gttggggcag ggcccatgct ggctcgattg
    19261 gagaaaggca tggatgagcc cgttgtcgaa aaaggtgcag ctttctccag cggtgagcgg
    19321 cagctgattg cttttgctcg caccctttat tccgatccaa aaatcttgat tctggacgag
    19381 gcgacttccc atatcgatac ggagacagaa gagattatcc agcacgctat ggaagttgtc
    19441 aaagaagggc ggaccacctt tatcatcgcc caccgacttt ctaccattca aaatgcagac
    19501 cagattcttg tcttagatca aggtcgaatt attgaacatg ggaaacatga agaattggtt
    19561 gcacgtgatg gagtatatgc tcaaatgcat gagattcaag caaaggtgta ataagcagtt
    19621 aaaaattcca agctttggct ggaatttttt gctataattg actcatgaaa gccttaattt
    19681 ttgatgtaga tgatacgctt tatgatcaga ttcaaccgtt tgaacgtgct ttggaaagac
    19741 acattgaagt agcaagggag caaattgaac cactctacct ttcctttcgc agatatgcgg
    19801 atgaagtatt tgaagcgaca gcaattggaa agatgagtct gaaagacagt catatttatc
    19861 ggatgaaaca tgctttggca gattttgggt atcaggtgtc tgatgcaaca gccttagcta
    19921 ttcaaataga ttatgattat tttcaagggc agatagagct cagtccagtg tttccagaaa
    19981 tattttcatg gtgtcaggcg caaggaattg caatggggat tattacgaat ggaccttata
    20041 gacatcagtt gagaaagata cgcacgatgg ggttagttaa ttggtttgag ctagaacatg
    20101 tcctaatttc tggacaagtt ggtatcacaa agccaaatcc tgctattttt caactaatgg
    20161 aagaacgttt ggggctgtca ggcgtagata tttgttatct aggggattcg tttgaaaatg
    20221 atgtggtagg agcgaaagct gcgaattgga aggcaatttg gtttaatcat agaaagagag
    20281 tagagccaac agctccgtat caggcagata aagtggtgac agattgggat gaactggtcg
    20341 aagttatcca gtctttctag tggtttctac aagggattat caatttttta taggtgtgat
    20401 aggtaaaata tattagcaga atacctgtct ttatgatagt ataaaatgta agcatagaag
    20461 tataggtgtg aatccaagca gatttttatt cctactctat gaaatttttt gaaatggagt
    20521 tacctatgac acaagctttc tttcctatcc atactctaga gactgttagt ccagaattac
    20581 gagaaaacct tgcgactgtc aagaaaaata atggcggtta tattcctaat ctcatcggtc
    20641 ttttagccaa ttctcctaca gccctagaaa cctaccaaac tgttagtggt atcaatcgcc
    20701 gtagtagtct gaatccgaca gagcgtgaag tggtacaaat tacagctgcc gttgccaatg
    20761 gctgtggatt ttgcgtggca ggtcatacgg ctatttctat caagcaggtt aagatgcctg
    20821 atgttattct acaggctcta cgccagggaa ctcccataga aacggatgca aaattagatg
    20881 ctctcgctcg atttactctg gctgttatcc atgaaaaagg caaggttgaa cagcccttgc
    20941 tagaggaatt tttccaagag ggcttcacgg ctgaaaatgc cttggatgtg gtgttaggag
    21001 tcagtcttgc aactctttgt aattatgcca acaatctcat caacactcct atcaatccag
    21061 aattacaggc ctatgctttg taggagttcc agcagaatat gtatcgaaaa ctagttagga
    21121 cgtttacgtt atcctaacta gtttttttga attaaccaag tgtgattttc ctaatataca
    21181 ttt
//
LOCUS       DASFQS010000033        20830 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.033, whole genome shotgun sequence.
ACCESSION   DASFQS010000033 DASFQS010000000
VERSION     DASFQS010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20830
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.033"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            58..1647
                     /locus_tag="U1041_001023"
     CDS             58..1647
                     /locus_tag="U1041_001023"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEM4768138.1"
                     /translation="MSKTIQAITNQIWSMANELRGNMDASEYKNYILAFMFYRYLSEH
                     QERFLVEDEIISPAPGETVQDAYAREAVGNDLVEHLENTASHLGYAIAPEDTWARLVA
                     KIDNSEIVASDYQTIFDHFNANVELNQDAMEDFRGVFNDINLGDSRLGNSTVARAKSL
                     NSIVKLIDSIEYKNDEGKDILGEIYEYLIGQFAASAGKKGGEFYTPHQVSKILAKIVT
                     LGLEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMH
                     QVGYSNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPYSAKWDNRESKLKDPR
                     FMEYGKLAPASKADFAFILHSLYHLNNTGTMAIVLPHGVLFRGAAEGHIRKLIIEKNY
                     LDAVIGLPANLFYGTGIPTTILVFKKNRQTRDVFFIDASKEFEKGKNQNHLSDDMVEK
                     IVETYHNRQSLDKYAHLASIEEIVENDYNLNIPRYVDTFEEEEEIDLGQVTQQLEQDR
                     LEIRALEDKIRQQLKTLGVDF"
     gene            complement(1698..2972)
                     /gene="serS"
                     /locus_tag="U1041_001024"
     CDS             complement(1698..2972)
                     /gene="serS"
                     /locus_tag="U1041_001024"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000884256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEM4768139.1"
                     /translation="MLDIKRIRTDFDGVAAKLATRGVAAETLADIKELDAKRREILVT
                     VEELKAERNTVSAEIAQAKRNKENADDKIAAMQKLSAEVKNLDAQLLEIDEKLNAILT
                     VLPNTPHDSVPVGADEEENVEVRRWGTPREFTFEPKAHWDLGENLDILDWERGAKVTG
                     ARFLFYKNLGARLERALYNFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTF
                     ELADTNFVLIPTAEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR
                     LHQFHKVEMVKFATPEQSYDELEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTY
                     DLEVWIPAQNAYREISSCSNTEDFQARRAQIRYRDAADGKVKLLHTLNGSGLAVGRTV
                     AAILENYQNEDGSVTIPEVLRPYMGGVDVIKP"
     gene            complement(3188..3562)
                     /locus_tag="U1041_001025"
     CDS             complement(3188..3562)
                     /locus_tag="U1041_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF956 family protein"
                     /protein_id="HEM4768140.1"
                     /translation="MAQSLNKHVKLSTTGVSYLSLAGGTVGKFLLGDQALEFYADNNV
                     ENYVQIPWTSIIQIGANVSNKKISRHFEIYTDSGKFLFASKDSGKILKIAREHIGNEK
                     VVKLPTLMQTIGRKISNLFAKK"
     gene            complement(3626..4537)
                     /locus_tag="U1041_001026"
     CDS             complement(3626..4537)
                     /locus_tag="U1041_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter family
                     subunit IID"
                     /protein_id="HEM4768141.1"
                     /translation="MTEKIQLSVKDRKAICWRSTFLQASWNFERMQNLGWAYTMVPAI
                     KKLYTKKEDQIAALKRHMEFFNTHPYVAAPIVGVTLALEEERANGADIDDAAIQGVKI
                     GMMGPLAGIGDPVFWFTVRPILGALGASLAVSGNILGPILFFGLWNAIRMGFLWYTQE
                     FGYKSGKEITKDMSGGILQDITKGASILGMFILAVLAQRWVSIGFNFTVSEVPLSEGA
                     YIEWDKLPEGYEGIQKAFELVGQGLSQTPTKVTTFQQNLNGLIPGFMHLLLTFLCMWL
                     LKKKVSPITIIVGLFAFGIVARLFGIM"
     gene            complement(4559..5365)
                     /locus_tag="U1041_001027"
     CDS             complement(4559..5365)
                     /locus_tag="U1041_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HEM4768142.1"
                     /translation="MSDISIISAILVVVVAFLAGMEGVLDQFQFHQPIVACTLIGLVT
                     GNLTAGVMLGGTLQLVALGWSNIGAAIAPDAALASVAAAIILIKGGDFSATAISVAQG
                     LAIPLAVAGLFLTMLVRTASVALVHGADAAAERGDFGALERYHLIALSLQGLRIAVPA
                     ALLLAIPTEAVQAALESMPAWLSGGMNVGGGMVVAVGFAMVINMMATREVWPFFAIGF
                     ALAAVSQLTLIALGAIGVSLAFIYLNLSKKGGNGGGAGSNDPIGDILEDY"
     gene            complement(5415..6407)
                     /gene="manX"
                     /locus_tag="U1041_001028"
     CDS             complement(5415..6407)
                     /gene="manX"
                     /locus_tag="U1041_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002308759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HEM4768143.1"
                     /translation="MSIGIIIASHGEFAAGIHQSGSMIFGEQDKVQVVTFMPSEGPDD
                     LYAKLNAAVDAFDADDEILVLADLWSGSPFNQASRVAGENPDRKFAIITGLNLPMLIQ
                     AYTERMINAAAGVEEVAANIIKEAKDGVKVLPEELQPTEAAPVADVATTTPQGAIPPG
                     TVIGDGKLKINLARIDTRLLHGQVATAWTPASKADRIIVASDTVAQDDLRKQLIKQAA
                     PGNVKANVVPIKKLIEVSKDPRFGNTHALILFETPQEALEAIEGGVEIKELNVGSMAH
                     STGKTMVNTVLSMDKDDVATFERLRELGVKFDVRKVPNDSPKDLFDLINKADVK"
     gene            complement(6629..7441)
                     /locus_tag="U1041_001029"
     CDS             complement(6629..7441)
                     /locus_tag="U1041_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4768144.1"
                     /translation="MKKKIIAIDLDGTLLNNDSQLSDYTISTIKKVRQAGHTVLIATG
                     RPYRMAEKFYQQLELDTPMINFNGSLVHIPGKKWQWEQNILIDKKYLLEFLKEEETFE
                     ADFIAGEYKNKFYITQKNLDKIDPALMGVEQITPDTLIKPELITSDPHSILMQTRATD
                     KYELAKEMNAYFKDELEINTWGGPLNILETCAKGVNKATALSYVLNLYQATPSDLIAF
                     GDEHNDVEMLDLAGTAYAMKNCSDTLRPHADRLTAFANFEDGVARELENLFL"
     gene            7785..9245
                     /locus_tag="U1041_001030"
     CDS             7785..9245
                     /locus_tag="U1041_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM4768145.1"
                     /translation="MDQFFKLKEQGTTVSTEIMAGLTTFFAMSYILFVNPSVLSVAGM
                     PTQAVFLATIIASAVSTLVMGLFANVPYALAPGMGLNAFFTYTVVIGLDFTWQEALAM
                     VFLCGLFNVLITVTKVRKSIIKAIPISLQHAIGGGIGVFVAYLGFKNSNLITFLTSGS
                     DIITVNGVAPADATAETFSNGVFSVLAGGGVVPSISTFTDPSVLLTVFGLLLTAVLVI
                     KNVRGAILIGIIATTLAGIPAGVVDLSTIDFANNNIGTAFAELGTTFLAAFDGLSSLF
                     ADSSRLPLVLMTIFAFSLSDTFDTLGTFIGTGRKTGIFSEEDEKALENGTGFNSKMDK
                     ALFADAIGTSIGALFGTSNTTTYVESAAGISAGGRTGLTAVTTAVLFLLSILILPFIG
                     IVPNAATAPALIIVGVMMVSSFLDVDWSQFEDALPAFFAAFFMALCFSISYGIAAAFI
                     FYCLVKVSTGKAKEIHPILWGATALFILNFIILAIL"
     gene            complement(9594..10454)
                     /gene="metF"
                     /locus_tag="U1041_001031"
     CDS             complement(9594..10454)
                     /gene="metF"
                     /locus_tag="U1041_001031"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEM4768146.1"
                     /translation="MIGQTPSLSFEIFPPKPAVGNEKIIQTLDEMQGLAPHFISVTCS
                     NNNLNVEETTVKLANHVRNELQIPTIAHLPAAYLTKEKVQSILHSLNEIGVHQILALR
                     GDIIEGLPPKEDFQYATDLISFIKEEAPHFDIIGACYPEVHPESPNSVSDIKNLKKKV
                     DAGCSTLVTQLFFDNEAFYNFQEKCSLADIEVPIIAGIMPIINRNQALRLLKTCENIH
                     LPRKFKAILEKYEHNPESLRAAGLAYAVDQIVDLVTNDVAGIHLYTMNNAETARTIHQ
                     ATHSLFKHYS"
     gene            complement(10458..12707)
                     /gene="metE"
                     /locus_tag="U1041_001032"
     CDS             complement(10458..12707)
                     /gene="metE"
                     /locus_tag="U1041_001032"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009729869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEM4768147.1"
                     /translation="MTTTIIGFPRIGENRELKFITEKYFRNEIPQEELLTAAKDLRAK
                     HWTIVKEAGITEIPSNDFSHYDNVLDAAVLFNIVPKAVQELDLTDLEKYFALARGYQG
                     EKGDVRARPMKKWFNTNYHYIVPAIEKDTEIKLAGHKIFDEFQEAKNLGITTRPVLIG
                     PFTLLQLTDFEEGATATDFADSLVAAYGQVFEKLAELGAEKIQLDEPSLVKDLTTEEK
                     ALFLRLYQTLLADKKGLQVLIQTYFGDVRDIYTELTNLPVDAIGLDFVEGKETAALVA
                     TGFPADKTLYAGIVNGKNIWRNNYEKSLAVLDGIPAENVVLTTSCSLLHVPFTTANEE
                     FEPAILNHFAFAVEKLSELRDLDAIRNGQGDTVLAANKELFALERVGRDTALADRLAG
                     LTDADYTRLPVFAEREAIQREKLNLPLLPTTTIGSFPQTKEIRSTRLAFRKGNISEEE
                     YDAFVKTQTDEWIAWQEEVDFDVLVHGEFERNDMVEYFGENLSGYLFSKNGWVQSYGM
                     RGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKE
                     STLQIALAIKEEVLDLEAAGIKIIQIDEAALREKLPLRRSDWYSEYLDWAISAFRLVH
                     STVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLVILDELKAKNFQTQVG
                     PGVYDIHSPRVPAVDEIAHTIQAILAKVPKEKVWINPDCGLKTRGESETKASLIHLTQ
                     AAKTARKEL"
     gene            12999..14570
                     /locus_tag="U1041_001033"
     CDS             12999..14570
                     /locus_tag="U1041_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4768148.1"
                     /translation="MKKKWLTGLLSTVAVLTLAACASSGSSTASSSSNSVADSETFTY
                     AINGDPSSTNPINTSDRWGLTLTNFIYSPLIRVEADGTYVNELADSYEVAEDGLSITV
                     KLRQDVKWSDGESFNADDVIFTYEQKIKKENGGSDGLYINDQPVTLEKLDDYTVKFVL
                     PAVSAPALDNIVTETYIIPQHVFKDEADFSASQLTATPVGTGPYKFVEYKHGEYIKLA
                     ANEYYYKGEAEIDNLVLRIIESADTTKVALQTGEVDAAFVLPSDIQDLSTDTITTYAY
                     SENRVGYLGLNTSTEELKDVKVRQALLYALNKEEFNQAAYLDKKYYENPYSFLPVANP
                     YVTEDVEKYEQNLEKAKQLLSEAGVSNLTLNLGYAGSDAAQTLQATLIQQQLSAIGVT
                     LELAGGDSTALFTELKKEGSTAYDLFLGGYIMGNDPDQYARLFKTGGASNYFKLSSND
                     VDSLFEQGAVELDQTKREQIYDDLQATLADQAAIYPIVDNKKVLAVNNRVKNVEEAGL
                     IPIYTFEDPSKLTIE"
     gene            14660..15622
                     /locus_tag="U1041_001034"
     CDS             14660..15622
                     /locus_tag="U1041_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768149.1"
                     /translation="MFRYIIKRILQAIPLLLLISFIVFSLIQLAPFDVIDSMTTPNMS
                     QEQIDLLKVKYGLDQPFLVQYAVWLKGLLTGDLGFSLMTQHSIGVDLVEKIPNTISLV
                     LPAYVTALILAIILGLLAASQRGKWVDKFIDAFASVGIAVPTFWFAMILIYFFGYKWQ
                     VFPFIGMYTLGKEGNLLDFLAHFTLPYVTLTMAFLPELIRFIRASAIVEVEKDYVTVQ
                     EAFKASRFEIFGKHVARNVLIPIVTQIGMALPMLVTGAIITETIFAWPGVGPYLTSAT
                     KSLDYPVIMAVMLLSATLVILGNLLSDILYAVVDPRIWKGGEGQ"
     gene            15625..16449
                     /locus_tag="U1041_001035"
     CDS             15625..16449
                     /locus_tag="U1041_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016613556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768150.1"
                     /translation="MKQFKEIVKSSPLYLFSILFILFLLFLSLIAPLIPIDPNVTNVS
                     QMNQGPSAAHWFGTDQVGRDYFIRVIYGGRISLLVGLLAMTASVTIGSLVGITAGYLG
                     GKWDNAIMRFVDVLSSIPWLVLVIVLSVFLKPGLTTIIIVIGGFSWMSIARMLRAETL
                     KAKVADYVGYAAFIGLKKPVIVWRHIFPAILPTLIVTASTSISSAIMTESALSFLGMG
                     IQQPLASWGSLLQNAQSTLQSAPHMAILPGLFILLTIYSFNNIGDLIRDCLEREVY"
     gene            16449..17309
                     /locus_tag="U1041_001036"
     CDS             16449..17309
                     /locus_tag="U1041_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768151.1"
                     /translation="MSKQLIEISNLTIVNKKRNGQSILVKGIDLSIPKGKIVGIVGES
                     GSGKSLSMKSLMGILPKGLEASYDRFELDGKQVRNPKVLPLSMIFQDPMTSLNPLRTV
                     GFHLQEVLRRFQPKLTKEERDRTIHEMLEKVGIEHPELRLKQFPFEFSGGMRQRIMIA
                     MALLTKPDLLIADEPTTALDVTIQAQILALLKELQEQLGLTVVIVSHDFSVIAGICDL
                     VYVMRNGLVVEHGTVDSIFSQPLHAYTQSLLRAARLEASLGAVLADSEDSQLIQVSPG
                     HWVRKEEKNE"
     gene            17302..18183
                     /locus_tag="U1041_001037"
     CDS             17302..18183
                     /locus_tag="U1041_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768152.1"
                     /translation="MNKEVLVQVSDVSKTYSKKNWFGQEQHVDALNGVNVSIYKGETL
                     GLVGESGSGKSTLSKIVLGLEKASQGRVDFPGLTADELNNQALQVIYQDPYSSLNPYL
                     SALELVKEPLYSLPKKEAEEKALAMLERVGILGDAVHKRPKSFSGGQRQRIGIARAVV
                     SHPKFIVCDEPTSALDVSIQATILDLLNQLQEDLGLTYLFISHDLNLVHEFADRIAVM
                     YKGSLVEIGPAKDIFQNPQHPYTRYLLQSNLSLDPLEARAQLQELSQTGLIKDFVTDG
                     VWTQVDKEHFVLKATDK"
     gene            18268..18957
                     /locus_tag="U1041_001038"
     CDS             18268..18957
                     /locus_tag="U1041_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEM4768153.1"
                     /translation="MGKVIIGISGNEQEFPTKSGRVYVTVARELADSVRQAGGVPMVI
                     PMGTPDLAKDYIEMIDKLILSGGQHVDPSLYGQKRLIDSDDYLLERDAFELALIEEAL
                     RQGKPIFAVCRGMQLLNVALGGSLEQEVADHWQEGIEGTSHRLQVKPKSRVSQLFSQG
                     SSINSFHHQRIKDLAPGLVATGLDPRDGTIEAYESKGKQALFGIQWHPEFLYNDCKQH
                     RDLFQYLVDVF"
     gene            19069..19890
                     /locus_tag="U1041_001039"
     CDS             19069..19890
                     /locus_tag="U1041_001039"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768154.1"
                     /translation="MLKKCQESKGFGSIRKGIHGAVGVLALGLLFSTTDVVFADEVSE
                     NTPTTASSEQVINTSETLILTAENDVEIPTEIVGNEGTSEVETTTGTNSPTVGAVPST
                     DVEASNVSGESISTKPESNTNLEANISSTSSPATDRAAEVLEDRTAPKLVSYTLDKTE
                     YQAGEIVTLTIDSEDESNLTYVSSKLISSDGTQSLYFSSSNFEKLANGLYRSVLTGSI
                     PENRPSDVYYIEYINLGDEIGNNVIYYDSSKNTWAEHTFVPLSMTVTGTVTDRTR"
     gene            19901..>20830
                     /locus_tag="U1041_001040"
     CDS             19901..>20830
                     /locus_tag="U1041_001040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768155.1"
                     /translation="MVLLVEDNSNITSVNLVFESESGTLRFGENITNIEQLEGNRKRL
                     TLSETIHYSYLPGQYDLRYLYLTDIYGNTSYLSTVDSLPAKTIVVNQANDVENLNPVV
                     ETTIVTNIEVVEKSSGRVLIRTNFHGEDLEAMKQVIREAISAYENEHGVTFDLLGAGG
                     TQISSRSVTVGNRTQTEVIRSYQQLVVNTSDNPLPEIEKKLLPEGVIYDNSTIRQALY
                     TIQFKDGESVVKESRRVANSTIDNVIRDESNGIDERAYYFESVEVSQGFTTIFSSDLN
                     YNGPFYEIVVNLKSSSKVENIEVDSPVEETPPSS"
BASE COUNT         5939 a         3952 c         4606 g         6333 t
ORIGIN      
        1 tcagcgaaaa tgagatttcg agtaaaaaat gaaacaacat gaaaggatta caaaaacatg
       61 tcaaaaacta ttcaagccat taccaatcag atttggtcca tggccaatga attgcgagga
      121 aacatggatg cttcggaata taagaactat atcctagcct tcatgtttta tcgctaccta
      181 tctgagcatc aagagcgttt cttggtggaa gatgaaatta tcagtcctgc tccaggagaa
      241 actgttcagg atgcctatgc acgagaagca gttgggaatg acttggtaga gcatttggaa
      301 aatacagctt ctcaccttgg atacgcgatt gcaccagaag atacctgggc aagactggta
      361 gccaaaattg ataacagtga gattgtagcg agtgactacc agacgatttt cgatcatttt
      421 aacgccaatg tcgaactcaa tcaggatgct atggaagatt tcagaggcgt ctttaatgac
      481 atcaatctag gggactctcg tttgggaaat tcaacggttg cgcgtgcaaa atccttgaac
      541 agtattgtga aattgattga tagcattgag tataaaaatg acgaaggaaa ggatattctg
      601 ggagaaatct atgagtatct tattggacag tttgccgctt cggcaggtaa aaaaggtgga
      661 gaattttata ccccgcatca agtgagtaag attttagcca agattgttac tttaggtttg
      721 gaaaaatcag atactagctt ctctgtttac gatccaacca tgggttcagg gtctttgcta
      781 ctaacagtgc gtaatgaact acctcagggc cagcatatca aattctatgg ccaagaaatg
      841 aacacaacta cttataactt ggcgcggatg aacctgatga tgcatcaggt cggctacagc
      901 aatatgattt tgaataatgc tgatacctta gaaagtgact ggccggacgg ggtcgatgaa
      961 cttggaatcg atcagccacg tagttttgat gcggtcgtcg caaacccacc ctactctgct
     1021 aaatgggaca atcgtgagtc caaattgaag gatccacggt ttatggaata cggtaagtta
     1081 gcaccagctt ctaaagcgga ctttgctttt atcttacaca gtctttatca tctgaataat
     1141 acagggacca tggccattgt tttaccacac ggagtgctct ttaggggagc agcagaaggt
     1201 catattcgca aactgattat tgagaaaaat tatctggatg cagttattgg cttgccagct
     1261 aacctgtttt atggcacagg cattccaacc actattctag tcttcaaaaa aaatcgtcag
     1321 accagggatg tcttctttat cgatgcgagc aaggagtttg aaaaagggaa gaaccagaat
     1381 cacctttccg atgacatggt agaaaaaatt gtagagacct atcataatcg tcagtctctt
     1441 gacaaatatg ctcatttggc atcaatagaa gaaattgtag aaaacgacta caatctaaat
     1501 attcctcgtt acgtcgatac ttttgaggaa gaggaagaga tcgatctcgg gcaagtaacg
     1561 cagcaactag aacaagatag actagagatt cgggctctag aagataagat tcgtcaacaa
     1621 ttaaagactt tgggagtaga tttttagata aatgaaaaga gcgagtagga tttttcctcg
     1681 ctctttcttt gtatgtctta aggtttaatc acatcaaccc cacccatgta tggacggaga
     1741 acttctggaa tggtgacaga accatcttcg ttttgatagt tttcaaggat ggctgcaacc
     1801 gtacgaccaa ccgctagacc agatccgtta agggtgtgga gcaatttgac cttaccgtca
     1861 gcagcatcgc ggtagcggat ttgggcgcga cgggcttgga aatcctcggt atttgaacaa
     1921 cttgagattt cacggtaggc attttgggca ggaatccaga cttccaagtc gtaggtctta
     1981 gcagctgaga agcccatatc gcctgtacag agggctaaaa cgcggtatgg caagcctaat
     2041 ttttgaagga tattttctgc gtttgcggtc attttttcca attcatcata agattgttct
     2101 ggtgtggcaa atttgaccat ttcaaccttg tggaattggt ggaggcggat cagaccacgg
     2161 gtatcacgac cagcagaacc agcttcagaa cggaaagatg gactcatggc tgtgaagtag
     2221 attggtaggt ctttttcttc caaaatctcg ttgcggtagt agttggtcaa tggcacttcc
     2281 gcagttggga tgaggacgaa gttggtatcc gccaactcaa aggtatcttc cttgaatttt
     2341 ggatattgtc cagtaccaaa catagagtca tggttgacca tgtaaggtgt gatgatttcc
     2401 tggtagcctt ctgcgatatg ctcgtccaac atgaagttgt agagggcacg ctccaagcgg
     2461 gcacccaagt ttttgtagaa gaggaagcgg gcaccggtta cttttgcccc acgttcccag
     2521 tccagaatat ccaagttttc gcccaagtcc cagtgtgctt ttggctcgaa ggtaaattca
     2581 cgcggagttc cccaacgacg aacttctacg ttttcttctt catccgcacc aacaggaaca
     2641 gaatcatgtg gcgtatttgg aagaacagtg agaatagcgt tcaatttttc atcgatttcc
     2701 aaaagctgag cgtctaagtt tttcacttcc gcagacaatt tctgcatagc agcaatcttg
     2761 tcgtcagcat tttccttgtt gcgttttgct tgggcaatct ctgctgaaac tgtgttacgt
     2821 tcagctttta attcttctac agtaaccaag atttcacggc gttttgcatc caattccttg
     2881 atgtctgcca aggtttcggc agccacacca cgagtagcta atttggcagc cactccgtca
     2941 aaatctgtac gaatacgttt gatatctagc atagatgtct cctttagaat aaaaaaacac
     3001 agaatgagag atgctggagc gatatttacc gcggttccat ccagcttcac attctgtgca
     3061 ctttaagtat gtcattttta gccaacggta gaatttcaca actttttcct atctgctcac
     3121 agcgaccgca gactttctgg aaggagccag atgctactta tccgtttcta ctattatact
     3181 tgatttttta ttttttggca aatagattcg aaatttttct gccgatagtt tgcataagag
     3241 tcggtaattt cacaactttt tcattgccga tatgctcgcg ggcaatttta agaatcttac
     3301 cagaatcttt agatgcaaaa aggaattttc cgctatcagt atagatttcg aagtggcgac
     3361 tgattttctt gttggaaaca ttggcaccga tctgaatgat agatgtccaa gggatttgaa
     3421 cataattttc aacgttgtta tcagcataaa attccagagc ttgatctcct agcaggaact
     3481 taccaaccgt tccacctgca agactgagat aggaaacgcc tgttgtggat agtttgacgt
     3541 gtttatttaa tgattgtgcc atagttacct catttcttgt tttattatac cataaaaccc
     3601 cgcatgagcg gggtttctta atggattaca taattccaaa taggcgagct acgataccga
     3661 atgcaaacaa accaacgatg atagtgattg gagaaacttt tttcttcaac aaccacatgc
     3721 ataggaaggt aagaagcaag tgcatgaatc ctgggataag accgttcaag ttttgttgga
     3781 aagtagtaac tttagttgga gtttgtgaca aaccttgacc aaccaattca aaggcttttt
     3841 ggataccttc gtagccttct ggcaatttat cccactcgat gtaagcacct tctgagagtg
     3901 gaacttcaga aaccgtgaag ttgaagccga tagataccca acgttgagca agtacggcaa
     3961 ggatgaacat accgaggata gaagcacctt tagtaatgtc ttggaggata ccacctgaca
     4021 tatctttagt gatttcttta cctgatttgt aaccaaactc ttgagtgtac cataggaagc
     4081 ccatacggat agcgttccaa agaccgaaga agaggattgg gccaaggatg ttacctgaca
     4141 cagcaagtga agcacctagg gcaccgagga taggacgtac tgtaaaccag aatactgggt
     4201 cgccgatacc agcgagaggt cccatcatac cgattttcac accttggata gcagcgtcat
     4261 cgatgtcagc accatttgca cgctcttctt caagggcaag tgttacaccg acgataggtg
     4321 cagcaacgta tgggtgtgtg ttaaagaatt ccatgtggcg tttaagagcc gcaatttgat
     4381 cttctttctt agtgtaaagt tttttgatgg ctggaaccat tgtgtaagcc caacccaagt
     4441 tttgcatacg ctcaaagttc catgatgctt gaaggaaggt tgaacgccag caaatcgctt
     4501 tacgatcttt tactgaaagt tgaatttttt ctgtcatgat tgtgttcttc ctttcttctt
     4561 agtagtcttc taggatgtcg ccgattgggt cgttagaacc agctccgcca ccgtttccac
     4621 cttttttaga aaggttaagg tagatgaagg caagagatac accgatagca ccaagagcga
     4681 taagtgtcaa ttggctaaca gcagcaagag cgaaaccgat agcgaagaat ggccatactt
     4741 cacgagtagc catcatgttg ataaccatag cgaaacctac ggcaacaacc ataccaccac
     4801 cgacgttcat accacctgac aaccaagctg gcatagattc aagagcagct tgaacagcct
     4861 cagttgggat agcaagaaga agggcagcag gaacagcaat acgaagacct tgaagtgaaa
     4921 gggcaatcaa gtggtagcgc tcaagtgcac cgaaatcacc acgttctgca gcagcgtcag
     4981 caccgtgtac aagggcaaca gatgcagtac gtacaagcat tgtaaggaaa agacctgcaa
     5041 cagcaagagg gatagcaaga ccttgagcaa ctgagatagc agttgctgag aagtcaccac
     5101 ccttgatcaa gatgatagcg gcagcaacag aagcaagggc agcgtctggt gcaatcgcag
     5161 caccgatgtt tgaccagcca agggcaacaa gttggagagt tcctccaagc ataacacctg
     5221 ctgtaaggtt accggtaacg agaccgatga gagtacatgc aacgattggt tgatggaatt
     5281 ggaattggtc aaggacacct tccatacctg caagaaaggc cacgacaacg accaaaattg
     5341 cagaaataat tgaaatatct gacatagtta taatcctttc atatttctga taatcacaca
     5401 gtgttaatca gttattattt aacatctgcc ttgttaatca agtcaaacaa atcttttggt
     5461 gaatcgtttg gaactttacg aacatcgaat ttgacaccga gttcacgcaa gcgttcaaag
     5521 gttgcaacat cgtccttatc catagaaaga acagtgttca ccattgtttt acctgttgag
     5581 tgagccatcg aaccaacgtt caattccttg atttctacac caccttcgat tgcttcaaga
     5641 gcttcttgag gtgtttcaaa gagaatcaaa gcgtgtgtgt taccgaagcg aggatcttta
     5701 gaaacctcaa tcagtttctt gataggaacg acgtttgctt taacgtttcc tggagccgct
     5761 tgcttgatca attgtttacg aaggtcatct tgtgccactg tatctgaagc gacgatgata
     5821 cggtcagctt tagaagcagg agtccaagca gtagcgacct gaccatgcaa gagacgagta
     5881 tcaatacgag ccaagttgat tttcaactta ccatcaccga taacagttcc gggagggatt
     5941 gcaccttgtg gagtagttgt tgctacatct gctacaggag cagcttcagt tggttgtagt
     6001 tcttctggaa gaaccttcac accatccttg gcttccttaa taatgtttgc cgcaacttct
     6061 tccacgccag cagcagcgtt aatcatacgc tctgtgtaag cttggataag cattggcaag
     6121 tttagaccgg tgatgatagc aaacttacga tctggatttt caccagctac acggcttgct
     6181 tggttgaatg gagaaccact ccaaaggtca gccaaaacca agatttcatc atcggcatcg
     6241 aatgcgtcca cggcagcatt gagcttagca tataaatcat ctggtccttc acttggcatg
     6301 aaagtaacaa cctgtacttt atcctgttcg ccaaagatca ttgaacctga ctgatgaata
     6361 ccagcagcaa attcgccatg acttgcaata atgattccaa tactcattat tgatcctcct
     6421 aaatttttct tgttcatgta aaaaccattg aatgggcttt catgttcgaa ctgtaacatt
     6481 ataaaacgtt ttcagtgcat ttgtcaagag aaattatgtt aaaagtgcaa aatgtttcca
     6541 aaacttttca taatcatgtt tcagaaaagt gataaaaata tgcaatgaat atgataaaaa
     6601 cctgacagtt tatcaggttt tttgatgtct ataaaaatag gttttctagt tcacgtgcga
     6661 caccatcttc aaaattagca aatgctgtca atctgtcggc atgtggacga agtgtatcgc
     6721 tacaattttt catggcatag gctgtgcctg ctaggtctag catctcaaca tcgttgtgct
     6781 catcgccgaa ggcaattaag tcgctaggag tggcttggta gaggttaaga acatagctca
     6841 gagcggttgc cttattgaca ccttttgcac aagtttcgag gatatttaat ggtccgcccc
     6901 acgtattgat ttctaactca tccttgaaat aggcattcat ttcttttgca agttcgtact
     6961 tatcagttgc acgagtctgc ataaggatgg aatgaggatc actagtgatt aattcaggtt
     7021 tgatgagtgt atctggagta atctgttcaa cccccatcag agccggatcg atcttgtcta
     7081 agttcttttg agtgatgtag aatttattct tgtattcacc agcaataaaa tctgcctcga
     7141 atgtttcttc ttcttttaga aattcgagta ggtatttttt gtcgattaaa atattttgtt
     7201 cccattgcca tttctttcca gggatgtgga ctaaagaacc gttgaaatta atcatgggag
     7261 tatccagttc tagctgttgg taaaattttt cagccattcg ataggggcga cctgtggcga
     7321 taagaacggt gtgtcctgct tggcggacct tctttatagt tgagatggta taatcagata
     7381 attggctatc attattgagc aatgtgccgt ccaaatcgat agctatgatt tttttcttca
     7441 tatttagtag cattcctttc tagattcgtt atgttagctt ttaatagtga ataatgttta
     7501 ggtagtagct agattgctga gaaattgttt tatgcgtcaa agaatacgac ttgtaggtag
     7561 ccatatcttg aactaataat ttccagtata acaaaaggag ataataaaag caaagaagcg
     7621 ataaattttg tatagatttt tgtaagtctg caacgttcgg gatttacgta tgttttgagt
     7681 cgaaaatcaa taaaataacg ttttcaagat tgaaaaactt gaaattagaa tgttttttga
     7741 ttataatgtt tttattgttc gtaaattaaa ggagaaatga aaaaatggat caatttttta
     7801 aattgaaaga acaaggaacg actgtttcta cggaaattat ggcaggactt acgactttct
     7861 ttgccatgtc atatatcttg tttgttaacc ctagtgtgtt aagtgttgct ggaatgccaa
     7921 cacaggctgt tttcttggct acaataattg ccagtgctgt atcaacgctt gttatgggat
     7981 tatttgctaa cgtaccttac gccttggcac caggtatggg gttgaatgcc ttctttactt
     8041 atacagtggt tattggtctt gattttactt ggcaagaagc tttggcaatg gttttcctct
     8101 gcggtttgtt taatgtttta atcactgtta ccaaggttcg taagagcatt attaaggcaa
     8161 ttccgattag cttgcaacat gccatcggtg gaggtatcgg ggttttcgtt gcctatcttg
     8221 gttttaaaaa ctctaattta atcaccttct tgacatctgg ctcagacatt atcactgtca
     8281 atggtgttgc acctgctgat gcgacagcag aaactttttc aaatggtgtt ttctctgttt
     8341 tggcaggtgg aggtgttgtt ccatctattt caacctttac tgatccaagt gttctcttga
     8401 cagtgttcgg tcttcttttg acagctgttc tggttattaa gaacgtgcgt ggtgcaattt
     8461 tgattggtat tattgcaacg actttagctg gaattccagc aggtgttgtg gacctgtcta
     8521 caatcgattt tgcaaacaac aatatcggta cagcctttgc ggagcttggt acaactttcc
     8581 tagcggcttt tgatggtcta tcttcgctct ttgctgactc aagccgtcta ccacttgttt
     8641 tgatgactat ctttgcattc agcttgtcag atacctttga tacacttggt acctttatcg
     8701 gtacaggtcg taagactggt attttctcag aagaagatga aaaagctctc gaaaatggta
     8761 caggctttaa ctctaagatg gacaaggcgc tctttgcaga tgcgattggt acctctatcg
     8821 gtgcactatt tggtacttca aatacaacga catatgttga atcggctgca ggtatctctg
     8881 caggtggtcg tactggtctg acagctgtta caactgctgt tctcttctta ctatcaattt
     8941 tgattttacc attcattgga attgtgccaa atgctgcaac agctccagcc ttgattatcg
     9001 tcggtgtcat gatggtttca tccttccttg atgttgattg gagccagttt gaagacgctc
     9061 ttccagcctt ctttgccgcc ttcttcatgg cgctttgctt ctctatctct tacggtattg
     9121 cagcagcctt tatcttctat tgcttagtaa aagtttcaac tggtaaggct aaagaaattc
     9181 atccaatcct ttggggtgcc acagctctat ttattctgaa tttcatcatt ctagccatct
     9241 tgtaatctgt ttattatcct tgaactgatc ttcatttgaa ggtcagtttt tttatttacg
     9301 attaaaatat atgggagtca atgtgattta ttcagcagaa tgctgtcttg aatattgtaa
     9361 attgaaaacg gatggagttt atttttttcc atttcgtcgc ttctctgtct cttcttagag
     9421 ccatttttac tccttgtgac tgtattttaa atggctgttc attattgtaa gcaagatgtc
     9481 acatacctag acatctgctg gaaaatgtca tgatggggtg aaaaatttat catgtagtct
     9541 ttgggagtca cagggcatag aataacccct gagcttgggc tcaggggagt tttctaacta
     9601 taatgtttga atagcgaatg agttgcttga tggatggtgc gggccgtttc ggcattgttc
     9661 atagtgtaga gatggatacc agccacatca ttggtcacta agtcaacaat ttgatctaca
     9721 gcataggcca gacctgctgc ccgaagagat tcaggattgt gctcatattt ttctaaaata
     9781 gctttaaact tacgagggag gtgaatgttt tcacaggttt tcaagagtcg aagtgcctga
     9841 ttcctgttga tgataggcat aatacctgcg ataataggca cctcgatgtc tgctagagaa
     9901 catttctcct gaaagttata aaatgcttcg ttatcgaaga agagttgagt taccaaggtt
     9961 gagcaaccgg catcaacttt ctttttcaaa tttttgatgt ctgagacaga atttggtgat
    10021 tctggatgta cttctggata acaggctcca ataatgtcaa aatgtggggc ttcttccttg
    10081 ataaaggaaa tcaagtcagt tgcatactgg aagtcctctt tagggggaag accttcaata
    10141 atatcgccac gaagtgctaa aatctgatgc acaccaattt cattgagaga atgaagaatg
    10201 gattggacct tttcttttgt caagtaagca gctggcaaat gtgcgatagt tggaatctgc
    10261 aattcattgc gaacatggtt agctaacttg acagtagtct cttctacgtt caaattgtta
    10321 ttgctgcatg taacactgat aaaatgaggg gccaaacctt gcatctcatc gagagtttgg
    10381 ataatctttt cattgcctac tgctggtttt ggaggaaaaa tttcaaatga gagacttggg
    10441 gtttgaccaa tcataaatta gagttccttt ctggctgtct tagctgcttg agtcaagtgg
    10501 ataaggctag cttttgtttc tgattcgcca cgagtcttga gtccgcagtc tgggttaatc
    10561 caaacttttt ctttcggtac tttagcaagg atggcttgga ttgtgtgtgc aatttcatca
    10621 actgcaggga cacgtggaga gtggatatca tagacaccag gacctacctg agtttggaag
    10681 tttttagcct tgagttcatc tagaataaca agatttgaac ggctggcttc aaaggagata
    10741 acatccgcat ccatattgtc gatggcagga atgatgtcag taaattcgct atagcacatg
    10801 tgagtgtgaa tttgtgtatc tggtgcaaca gttgagtgta ccaaacggaa ggcagaaatt
    10861 gcccagtcaa gatattcgct gtaccagtcg ctgcgacgaa gtggcaattt ttcacggaga
    10921 gcagcttcat cgatttggat aatcttgatt ccagctgctt caaggtcgag aacttcttcc
    10981 ttgatagcaa gggcaatttg aagggttgat tccttgatag agatatcttc acgtgggaat
    11041 gaccagttga ggatggttac aggacctgtc aacatgcctt tgactggttt attggtacgg
    11101 ctttgagcat agctagacca tttaacagta attgggttca agcgtgttac atcaccccag
    11161 atgattggtg gtttgacccc acgcataccg taggattgta cccaaccgtt tttactgaag
    11221 aggtagccag acaggttttc accgaagtat tctaccatgt cgttgcgttc aaattcaccg
    11281 tgaaccagta catcgaagtc aacttcttcc tgccatgcaa tccactcatc tgtttgagtt
    11341 ttgacaaatg catcgtattc ttcttctgag atatttcctt tacggaaagc taagcgtgtg
    11401 ctgcgaattt ctttggtttg agggaaagag ccaatcgttg ttgttggaag aagtggtaag
    11461 tttagcttct cgcgttgaat agcttcgcgt tctgcaaaga caggcaagcg agtgtagtct
    11521 gcatctgtca aacctgctaa gcggtctgca agcgctgtgt cacgccccac acgttcaagg
    11581 gcaaagagtt ccttgttggc agcaagcaca gtatctcctt gaccatttcg gatagcatct
    11641 aagtcgcgca attcgctcag tttttcaact gcaaaggcga aatggttaag gatagctggt
    11701 tcaaattctt cattggctgt tgtaaatggt acatgaagta gtgagcaaga agttgttaga
    11761 acgacatttt cagctggaat accatccaaa acagccaggc tcttttcata attgttgcgc
    11821 cagatgttct taccgttgac gataccagcg tagagggtct tgtcagctgg gaaaccagtt
    11881 gcaacaagtg cagcagtttc cttaccttct acaaagtcaa gaccgatggc atcgactggt
    11941 aggtttgtca attcagtgta aatatcacga acatcaccga agtaggtttg gataaggact
    12001 tgcaagcctt ttttatctgc caagagtgtt tggtagagac gtaggaaaag ggctttttct
    12061 tctgttgtca aatccttgac caagctaggc tcgtctaact ggattttttc cgcaccgagc
    12121 tctgccaatt tttcaaagac ttgtccgtag gctgcaacta agctgtcagc gaaatcagta
    12181 gctgtcgcac cttcttcaaa atcagttaat tgtaagagtg tgaatggacc aatcaaaact
    12241 ggacgagttg tgatgcccaa gttctttgct tcttggaatt catcgaaaat cttatgaccg
    12301 gctagtttga tttctgtatc tttttcaata gctggaacga tatagtggta gttggtgttg
    12361 aaccattttt tcatcggtct agcacgaacg tccccttttt ctccttgata accacgtgca
    12421 agagcgaagt atttttcaag gtcagtcaag tcaagctcct gaactgcttt tggtacgatg
    12481 ttgaagagaa cagctgcatc caaaacattg tcatagtggg agaagtcgtt gcttgggatt
    12541 tcagtaatgc ccgcttcttt gacaatagtc cagtgcttgg cacgcaagtc cttagctgcc
    12601 gtcaatagtt cttcttgtgg aatttcattt ctaaagtatt tttcagtgat aaattttaat
    12661 tcgcggtttt caccgatacg tgggaagccg ataattgttg ttgtcatgag atttcctcca
    12721 aaatatttct atgctcttat cctaacagaa aaaataccac ttgtataatt gtaaaaaatt
    12781 agatgttgtt atagttttta gttataacaa ccttggttaa gatttcgttt taataatgcc
    12841 tactatatag tccgattttt ttcttcttca actcttcgta ataaagtgta gattgtttcg
    12901 ttatagtttt tcttaatgag ttgataaata ttatttattt gtcaaaattt taaatccttg
    12961 gtagactagt actacttttt gaaattggag gaagtgttat gaagaagaag tggctaacag
    13021 gcttattatc tacagtagca gtactaacct tggcagcttg tgctagtagc ggttcatcaa
    13081 ctgcatcatc aagctcaaac tcagttgccg attcggaaac ttttacttat gcaattaatg
    13141 gagatcctag ttcgacaaac ccaatcaaca ctagtgaccg ttggggctta accttgacta
    13201 actttattta ctctccactt attcgtgttg aagcagatgg tacttatgta aatgaattgg
    13261 cagattccta tgaagttgcc gaagatggtc taagtatcac cgttaaactc cgtcaagatg
    13321 tcaagtggtc tgatggggaa agtttcaatg ctgatgatgt catctttact tatgaacaaa
    13381 aaattaaaaa ggaaaatggt ggttcagacg gtctttatat aaacgaccaa ccagttacgc
    13441 ttgaaaagtt ggatgattac acggttaaat tcgttctgcc agctgtttct gcaccagcct
    13501 tggacaatat tgttacggaa acatacatta ttccacagca cgttttcaag gatgaggcag
    13561 acttctcagc aagccaattg acagcgacac cagtgggaac tggtccgtac aagtttgtag
    13621 aatacaagca tggtgaatat atcaaacttg cagctaatga gtactactac aagggagaag
    13681 ctgaaattga taacctcgtt ttgaggataa ttgaaagtgc tgatacgact aaagtagcct
    13741 tacaaacagg tgaagtagat gcggcctttg tattgccttc tgatattcaa gatttgagta
    13801 cggatactat tacaacctat gcctacagtg aaaatcgtgt cggttatctt gggctcaata
    13861 cttcgactga agaattgaag gatgtaaaag ttcgtcaagc cttgctttat gccttaaata
    13921 aagaagagtt taaccaagct gcttacttgg ataaaaaata ctatgaaaat ccatattcat
    13981 tcttgcctgt tgccaatcca tatgtgacgg aagatgttga gaaatatgag cagaatttgg
    14041 aaaaagcaaa acaactctta tctgaagcag gtgtcagcaa tctgacttta aatcttggtt
    14101 atgcaggttc tgatgcagct caaactttac aggctacctt aattcaacaa caattgtcag
    14161 caattggtgt gacacttgaa ttggcaggtg gggactctac agcactcttt acagagttga
    14221 aaaaagaagg ttcaacagct tatgaccttt tcttgggtgg ctatatcatg ggaaatgacc
    14281 ctgatcaata tgcccgccta ttcaaaactg gtggagcttc aaactacttc aaattgtctt
    14341 caaacgatgt tgacagcctc tttgagcaag gagctgttga attggatcaa acgaaacgcg
    14401 aacaaatcta tgatgatttg caagcgacac tggctgacca agctgctatt tacccaatcg
    14461 tagataacaa gaaagtgttg gcggtgaaca accgtgtgaa aaatgtagaa gaagcgggtt
    14521 tgattccaat ttatactttt gaagatccgt cgaagttaac aattgaatag tctttgtatg
    14581 ctggtatgac cagcaaagag gagaaggagt ggtaaaaagt ggaaactcct cccctctttt
    14641 tcgtgttttt ggaggatata tgtttcgtta tattataaaa agaatcttgc aggccattcc
    14701 cctcttgctg ctgatttctt ttattgtctt ttctttgatt caattggcac cgtttgatgt
    14761 catagattcg atgacaacgc caaatatgag tcaagaacaa attgatttat taaaggtaaa
    14821 atatggtttg gatcaaccgt tccttgttca atacgctgtc tggctgaagg gattactgac
    14881 tggagattta ggtttttcac taatgactca acactcgatt ggagttgatt tagttgaaaa
    14941 aattccaaat accatttcat tggtcctgcc cgcatatgtg acggccctaa tcctagcgat
    15001 tattctgggt ttgcttgcgg cgtcccaaag gggtaaatgg gtggacaagt tcattgatgc
    15061 ctttgcttct gtaggaattg cagtcccgac cttctggttt gccatgattt taatttactt
    15121 ttttggatat aaatggcagg tcttcccatt tattgggatg tataccttgg gaaaagaagg
    15181 aaaccttctt gattttctgg cacattttac cttaccctat gtgaccttga caatggcatt
    15241 cttaccagaa ttgattcggt ttattcgagc ctcagcaatt gtagaagttg agaaagatta
    15301 tgtgaccgtt caagaggctt tcaaagccag ccgatttgag atatttggga aacatgtggc
    15361 ccgcaatgtt ttgattccta ttgtgactca aattgggatg gccttgccga tgctggtaac
    15421 aggtgctatt attacagaga ctatttttgc atggccggga gttggtccct atttgacttc
    15481 agctacaaag agcttagatt atccggttat aatggcagtc atgcttttgt ctgcgacctt
    15541 agttattcta gggaatctct tatcagatat tctctatgct gtggtggatc cgcgtatttg
    15601 gaaaggagga gaaggtcaat gattttgaag caatttaagg agattgtaaa gagttcgcca
    15661 ctctatttat tctcgatttt gtttattctt tttctactat ttttatcctt aattgcgcca
    15721 ctgataccta tagatccaaa tgtgaccaac gtaagtcaga tgaaccaggg tcctagtgca
    15781 gcgcattggt ttggtacaga tcaggtggga cgtgattact tcattcgagt gatttatggt
    15841 ggtcgcatct cactcttagt tggattattg gcaatgactg catcagttac gatcggaagt
    15901 cttgttggta ttacagcagg ctatcttgga ggaaaatggg ataatgctat tatgcggttt
    15961 gtcgatgtcc tatcatccat accttggttg gttttagtta tcgtcctcag cgtctttctg
    16021 aaaccaggat tgactacgat tatcattgta ataggtggtt tttcttggat gagtattgct
    16081 cggatgttgc gtgctgaaac attgaaagca aaagtggcgg attatgttgg gtatgctgcc
    16141 tttattggtt taaagaaacc agtgattgtc tggcggcata tctttccagc aatccttccg
    16201 actttgattg tgaccgcttc aactagtatt tcatcagcta ttatgacgga atcagccctc
    16261 agcttcttag gaatggggat tcaacaaccc ctagcatcct ggggaagtct cttgcaaaat
    16321 gcccagtcta ccttgcagag tgctcctcat atggcaatat tgcctggact ttttatccta
    16381 ttgaccattt attcatttaa caatatcggt gatctgatac gggattgcct tgaaagagag
    16441 gtctactaat gtcaaaacaa ctaatcgaaa taagtaacct caccattgtc aataaaaaga
    16501 gaaatggaca atcgatactg gtgaagggga ttgacctgtc tattcccaaa ggaaaaattg
    16561 taggtattgt cggagagtct ggttcaggta agagcttgtc gatgaagtct ctgatgggca
    16621 ttttaccaaa aggtttggaa gcaagctatg atcgatttga attggatgga aagcaagtac
    16681 gtaatccaaa ggttttgcct ttgtctatga tttttcaaga tccaatgact tcccttaatc
    16741 ccttgcggac agtaggtttt catttgcagg aagtattaag acgttttcaa cccaaattga
    16801 ctaaggaaga acgggacaga actatccatg aaatgttgga aaaggtggga attgaacatc
    16861 cagaattacg acttaagcag tttccttttg aattttcagg aggtatgcgt caaaggatca
    16921 tgattgccat ggccttgttg accaagccgg atttgttaat cgcagacgag ccaacaacag
    16981 ctttagatgt aaccattcag gctcaaatct tggccttgct caaagaatta caggaacagt
    17041 tggggttgac agttgtgata gtgagtcatg atttcagtgt tattgctgga atctgcgact
    17101 tggtttatgt catgaggaat ggattggttg tggaacacgg aacggttgat tctatctttt
    17161 cacaaccctt acacgcatat acccagtcac tattaagagc agctcgtttg gaagccagtc
    17221 ttggagcggt tttagccgac tccgaagata gtcagttaat tcaagttagt ccaggacatt
    17281 gggttagaaa ggaggagaag aatgaataag gaagttctag tacaggtttc ggatgtgagc
    17341 aaaacttact ctaagaagaa ttggtttggg caagagcaac atgtcgatgc tttgaacggt
    17401 gtaaatgtgt ccatttataa aggtgagaca cttggtctgg ttggtgaatc aggcagtggc
    17461 aaatcgacac tttctaaaat tgtcttaggt ttggaaaagg ctagtcaagg ccgggttgat
    17521 tttcctggtt tgacggcaga tgagttgaat aaccaggccc tgcaggttat ttatcaggat
    17581 ccatattctt ctctcaatcc ctacctgtcg gccttagaac tggtcaaaga acctctctac
    17641 tcacttccta agaaggaggc ggaagagaag gctctagcta tgctggaaag ggtgggaatt
    17701 ctgggggatg ctgtacacaa acgcccaaaa tcttttagtg gtggtcaacg ccagcgaatt
    17761 ggcatcgctc gtgcagttgt ttctcatcca aaatttatcg tctgtgatga accaacttcg
    17821 gctcttgatg tgtcgataca ggcgaccata ctggatttgt tgaaccagtt gcaagaggat
    17881 ttaggactga cctatctctt catttctcat gatttaaact tggtgcacga attcgcagat
    17941 cgtattgcgg tcatgtacaa gggaagcttg gttgaaattg gaccagcaaa ggatattttt
    18001 caaaatccac aacatcccta tactcgttac ctcttgcaat caaatttaag ccttgatccg
    18061 ctggaggcac gggctcagtt gcaagagcta tctcaaactg ggcttataaa ggattttgta
    18121 acagatggtg tatggactca ggtggataag gagcattttg tactaaaggc aactgataaa
    18181 taatttttat cagcccataa aagttctata ttagacaggc ttagttggtc atgttacaat
    18241 atataaaatc gtagaaagga gtttcttatg ggaaaggtga ttattggaat ttcaggaaat
    18301 gagcaagaat ttccaactaa atctggtcgc gtatatgtaa cggtagcgcg tgaattggca
    18361 gacagcgttc gtcaggcagg tggtgtgcca atggttattc ctatgggaac tcctgatcta
    18421 gctaaagact atatcgaaat gattgacaag ttgattttgt caggtggtca gcatgtggat
    18481 ccaagtctct acggtcaaaa acgcttgatt gatagtgatg attacctctt ggaacgtgat
    18541 gcatttgagt tagccttgat tgaagaggcc cttcggcaag gaaaacctat ttttgccgtt
    18601 tgccgtggca tgcagttgct caatgttgct ctaggtggta gtttagagca ggaagtggct
    18661 gatcattggc aagagggtat cgagggaaca tctcatcgtt tacaggttaa accgaagagt
    18721 cgtgtcagtc agttgttctc tcaaggtagc tccattaatt ccttccatca tcagcgaatt
    18781 aaagatttgg caccaggttt ggtggcaact ggactagatc cacgagatgg aaccattgag
    18841 gcctacgaaa gcaaggggaa acaagccttg tttggtattc aatggcatcc agaatttctc
    18901 tacaatgact gcaagcaaca tagagactta tttcagtatt tggtggatgt gttttagtca
    18961 tattctttgc actcaagtaa ttgagtgttt ttttgtaata atttgccagt aaatacttta
    19021 taaatcagat aaaattgtat ataataacac taattaaagg aggattatat gttaaagaaa
    19081 tgccaagaat ccaaaggttt tggaagtatt agaaaaggaa tccatggggc agtaggagtg
    19141 ctggctctag gtttgctgtt ttctactacg gatgttgtct ttgctgatga agtgagtgag
    19201 aatactccca caacagcaag ttctgaacaa gtcataaata cttcagaaac tcttatatta
    19261 actgcagaaa atgatgtcga aataccaacc gaaattgtag gaaacgaggg gacttcagag
    19321 gttgaaacca cgacaggtac aaattctccg acagtaggag ctgttccttc aactgatgta
    19381 gaagcaagta atgtaagcgg agagtcaatt tcgactaaac cagaatcaaa tacgaattta
    19441 gaggccaata tttcatcgac cagctctcca gcaacagata gagcagcaga ggtattggaa
    19501 gaccgtacag caccaaaact ggtttcttat acattagata aaacagagta ccaggcggga
    19561 gagatcgtaa ctctaacaat tgattcagag gatgagagta atctcactta cgtatcatca
    19621 aaattaatat cttcagatgg aacccagagt ctctactttt cttctagcaa tttcgaaaag
    19681 ttagcaaatg gcttatatcg ttcagtatta acaggctcca ttccagaaaa tcgtccaagt
    19741 gatgtttatt atatagaata tataaatctt ggagatgaga ttggcaataa tgttatttac
    19801 tacgattctt cgaaaaatac atgggcagaa catacatttg taccactttc aatgacggtt
    19861 actggtacag tgaccgaccg tacaaggtga gacagttgaa gtggtacttt tagtggaaga
    19921 taattcgaat atcacatctg ttaatctcgt atttgaaagt gagtcaggaa cactccgatt
    19981 tggcgaaaat attacaaata ttgagcaatt ggagggaaat cgaaaaagac tgactttatc
    20041 tgaaacaatt cactattctt atttaccagg acaatatgat ctgagatatt tatatctgac
    20101 agatatttat ggtaatacga gttacttatc cactgttgat agtttgcctg cgaaaaccat
    20161 tgttgtcaat caggctaatg atgtagaaaa tttaaatccg gttgttgaaa cgacaatagt
    20221 aaccaatatt gaggttgttg aaaaatcaag tgggcgagta ctgattcgca caaatttcca
    20281 tggtgaagac cttgaagcaa tgaaacaagt gattcgtgag gcaatttcag catatgaaaa
    20341 tgaacatggt gtaacatttg atttacttgg tgctggtggg actcaaatct cttcaaggtc
    20401 agttactgtt ggaaatcgga ctcaaacaga ggtaatacgt tcataccagc aactagttgt
    20461 aaatacatcg gataaccctc tgcctgaaat tgagaaaaaa cttctaccag aaggtgtgat
    20521 ctacgataat tcaactatca ggcaagcctt atatactatt caatttaaag atggtgaatc
    20581 agtagttaaa gagagtcgtc gagttgcaaa ctccacaatt gataatgtca ttcgtgatga
    20641 aagtaatggt attgatgaaa gggcatatta ttttgaatct gttgaggtaa gtcaaggttt
    20701 cactacaatt tttagtagcg atttgaatta taatggtccc ttttatgaaa ttgttgtcaa
    20761 tttgaaatca agctcgaaag tagaaaatat agaagtagac tcaccagtcg aagaaacgcc
    20821 gccatcttca
//
LOCUS       DASFQS010000034        20806 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.034, whole genome shotgun sequence.
ACCESSION   DASFQS010000034 DASFQS010000000
VERSION     DASFQS010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20806
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.034"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(24..2537)
                     /locus_tag="U1041_001041"
     CDS             complement(24..2537)
                     /locus_tag="U1041_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DnaQ family
                     exonuclease/ATP-dependent helicase"
                     /protein_id="HEM4768156.1"
                     /translation="MEFVWSFFREREYAIMNSMKDRRTSNRYAVVDLEATGTGADAKI
                     IQIGIVLVENGEIIDSYATDINPYELLDDHIKNLTGITDQQLSHAPDFGQVASTIYDM
                     IGDAIFVAHNVKFDANLLAEALFFEGYELLTPRVDTVELAQLFFPTFDKYSLGNLAEH
                     LDLGLDQAHTAISDALATARLLIKIQEKIKSLPRTVVEKILDLADNLLFESRMVIDEM
                     VPYLEETISTSLESVHGLVLKKPVKDQPAYHLSEDFVTNLALLGLHERKKQTAFAQVV
                     EKRLADAEKVHFIQAQAGLGKTYGYLLPLLAKSDQPLLVIVPTKLLQEQIMEKEGSKL
                     KEIFRIPIVSLKSPKHFIKLDNYWKTLQRQDDNRLVNQFKMQVLVWLCETTTGDLDEL
                     KQKQRYQAYFDEIVHDGNVEPESLFWGWDFWQGLNQQALSSRLLITNHAYFLSHLKDQ
                     DPLMNNRLVVIDEAQKFLLAAENLATDSQDITALLQVLQSKKDKSDSLLDQRLYESCQ
                     FELNHLLTRFRQHGQREVSKDELGQVKQNLAELQDVDLQDLDQLLDVYDHFWLEEKYL
                     EDKRIAYLRGSKDSLLNVATYLPDTKIFCISATLTISKKVSLADLLGFEQVTLDLIPT
                     QTVTNQQLLFPTHLPDILAWTKEEHAAYLATTLGEIAELGRPILVLFTSISLLLQVSD
                     LLEDNNIPHLAQHKHGQEMTLKRKFERGECQILLGTGVFWEGVDFASQNQLIQVITRL
                     PFDNPKDRFIQKINHHLREEGKNPFYDYSLPMMMIKLKQAIGRTNRHDKQDSLVLVLD
                     PRVHTKRYGQQILSFFEKDYSMLSVDAKEIEGAIQDFFE"
     gene            2601..3239
                     /locus_tag="U1041_001042"
     CDS             2601..3239
                     /locus_tag="U1041_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM4768157.1"
                     /translation="MLIHKSVNPVAFQNTYYLENDSHLLVVDPGSDWPKIQAMIEKIG
                     KPIAAILLTHTHYDHIMSLDILRESYDFPPVYVAESEASWLYTPEMNLSGLPRHDDME
                     NVVCRPAENIFQYQEDYQFDGFHFKVVPTPGHSIGGVSFIFPEDECVITGDALFRETV
                     GRTDLPTSNFDDLITGIREHIFTLPNHYTVHPGHGQNTSVGHEKNFNPFFRL"
     gene            complement(3284..3625)
                     /locus_tag="U1041_001043"
     CDS             complement(3284..3625)
                     /locus_tag="U1041_001043"
                     /inference="COORDINATES: protein motif:HMM:NF013590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768158.1"
                     /translation="MFDGLEVYGGRINGQLTLSENLADLGGIQIALATLKKEEPSANL
                     KEFFEHYARSRREMVAVDYGLYQLQVDTHSPEEFRVNLQLQQMDDFYKVYHIQEGDPM
                     YRAPEERLVMW"
     gene            complement(3631..5298)
                     /locus_tag="U1041_001044"
     CDS             complement(3631..5298)
                     /locus_tag="U1041_001044"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013590.1,HMM:NF017464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HEM4768159.1"
                     /translation="MIKQGLLRLVLLGFSCLLAACGGQKIRDDQTQVEKAEPTIQTNF
                     YQAINKDWLNGGWLSSGTPFYNEFTRLQMEVDEQLKSDFDKMVAGQLEPQSEDLVEFI
                     KLYQQGLDFTKREEDGVRVARMILDEMMGITSFSELKSLSQDWIRKDYPLPYGLDVIA
                     NPRNTSERMLILLPPQTILPDKSYYEDRTVREKLMDSYRISVRHILEKCGYSDEEATA
                     LVEGAIAFDNRLVDTLPASENVHSDWGPVNAEELRTFSQVKNYSPALSIGEQLVGLVG
                     LEPEEVYVSNPSYFEQLSQFIKEENFSEYRSWALVSQAMKLAPYLTGEIMQTAGRFHA
                     EVQGFSASYPNDYMTYLDVTGMFKESLGVYYGHNYADETDLLAIQEMAEAISRTYQER
                     ILANKWLSQATKQAAIKKLENITYHIGYPRELSDWTKSLKVREDLSYIENVLAITIQA
                     RTGVFERYSQPIDRQTWASNVSASEVTAAYAPSQNAIYIPTAILQAPYYDKNQSVAEN
                     YGGIGKIIAHEFVHAFDATGANFDETGSLKDWWIERDRLAFEEKIKP"
     gene            complement(5359..6381)
                     /locus_tag="U1041_001045"
     CDS             complement(5359..6381)
                     /locus_tag="U1041_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEM4768160.1"
                     /translation="MLEHSIDIHLKHPDDLFSLFGSNERHLRLMEQELGVVIHARTEK
                     VQVIGQEEHVEQARLVIQSLLVLVNRGLIINTPDVVTAISMVKNDEIEKFVALYEEEI
                     IKDNYGKPIRVKTLGQKLYVDSVKRHDIVFGIGPAGTGKTFLAVTLAVTALKRGQVKR
                     IVLTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQILGKEQTTRLMEREIIEIAP
                     LAYMRGRTLEDAFVILDEAQNTTIMQMKMFLTRLGFNSKMIVNGDISQIDLPRKVKSG
                     LIDATEKLSKIPQIDFVHFSAKDVVRHPVVAQIINAYEQEALAADGRASFETIGELKK
                     EQDAEE"
     gene            complement(6776..13672)
                     /locus_tag="U1041_001046"
     CDS             complement(6776..13672)
                     /locus_tag="U1041_001046"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017180.1,HMM:NF019142.1,HMM:NF019216.1,
                     HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4768161.1"
                     /translation="MKQYRHSIFSIRKLSIGVVSLCIGSGLLLSSLSGLQVEASERIA
                     KSNQEIHFQYLLEEELSPEEKNRIVQNLPEELRQEATYFVVYRPHPSKVLPVTGEVVS
                     QVAGWLAAGFLLIGIRAISSKKARVTSLLYITISGTVLPVLQIEALQSHALARFNQTV
                     TVKAGDVLPDGKLKLDSYDFVGYIVEEGKTSDANITLPNLDNLQKSTGLDEPNLTDKE
                     IPNSTEPSLPQILIKYREEKIPMEMKRVVVDDPELAIGQERLEAGVAGYYLHRYEESW
                     LGDNLQSSRLIEVIEEVGKPEILYRGTKVEELPEQPIETQVPDHAPTAQPPVRLEYEL
                     QERVDQQVLPILEERIETDRLAQGETETVEGQTGLLEITYQDVIVDGKVIASNEVSRT
                     GTPAINRKVYVGTRVDSKEVEPLTHSIPEAIIVSEEVPIPFEREQRSDPTMAVGTSRV
                     EAGKEGLSREIYAELNGVRTHLKSEEITPAQPEITYVGSAVDEVTEEELPLVERIVEL
                     ADQYTDYILEVQAGYPGRRKTISRNGEVIRVETEEGQEKIVHIGIKPIEGTVIENLSQ
                     TLDYGTVYQAAPNLAFGVRQETEGQAGQEVFEVTYRTIKGQKTEEIRRKRISYTTPVD
                     KVITVGTQATEEEVREALPAIYEADDTIPLGQQTPFFAGREKVTVYRTTYVLDEETGQ
                     VSSQRDQGTLREAGESPVIRVGTQPKVETLREPLPVVYQADTTRPTTSEPVRQAGRDK
                     VSTLTTTYSVNPNTGEVTASESVRKVTDEGQSTVITVGTQPTVREVSQTLPTVYRARE
                     DMEPPYRKEVVTAQERRLGYRTNYVVNPQTGERLPQAEESFVISEGRAAIIEVGTKST
                     VVSEKVPHQVIRQDDFTLPEGEEVEGPAGRDGSITRTTSYRLNEATGELETLSVQIVE
                     VAAQNQVIRVGKKVEEVPPKPLEKPTVRLASERAGGALVVNEETSQADLYYHVTDPDN
                     TLQSIRLEIYNGQELVKTVEKNYDGGVDGSLQVTDLQHYAAYQARLSYRYRTQDGQAD
                     ETVATLPFEISPKSIEFNRVSKRELFYRDQAGEFQQVTGLLQAPSDLSNYFVRYISPD
                     SKEFLWAVDTITENGNQFDIAVRLPKLVQARDQADSNQLESLDKFQVSKIVLAQDSYV
                     DFQQLIQAMKARPDGTFKLAADLVASPTTDTVYVENFRGRLEGLDGKVYRILNLNKPL
                     FQTMTGARVENILLENVALESGDARAAALAITANTSQIQNVHVTGRIQSYVGAAGLVY
                     ESNSSQFDSVSFKGELVLNEHRTSNQITSGGLVGRLMSGSSLRKAYVNLTSTFTPRIS
                     MQDRLGGLVGTAILSTIDSVFVEGQVTNTEQTNTLAGLVAVGYMPSISNVASALKLPE
                     TGLLVGTRTTVLVQENVSTGVEDNGHKAQQKSTEELKQILSTWGLDRVMQPIQDASGN
                     LDQASHQQVAYHLLRNGREDRKVAYENMSKLLPFYDRHTIVRMGNKLATDSVFVTKSI
                     QSIVALKDKEVVTDFSAQPSQVNKLLVYFTDKDVQVFDLAYQGAYDQTGVLEYRLGTD
                     LLFTPYQWVSGQNSTSLVATLRNSFKDLDVESDAYATKTKMAGYLEELRFKLGKQDLT
                     ISMKQLYLKRTQQLLKDNLDQELGSFLASQWVTNGATSAINAYMQKQVEDNKESIWLA
                     LTYLARYYGIDFDKLNLRNLAIYQPHFYGQSLSTLDWLKEVGNLTYKELAPFAAPITF
                     KKIFEKQVGVGQDLFAYLELNRQLFSPEKTDANWFKESSKAFIHEEVSISNPSKSVQV
                     YEQIKGNSDYHRYILPLLNLPEEDQLYLVSLPNVLVFGSYGRYVDHQLQISQPELYLA
                     KVKEIQEQRIPKHAQIWNRYMEFIKSLVSDAARQSIESKLITVREGYNIKDPAGKPLR
                     GDENDRRRWAAEFGDSYSIIDDFFGPTELYYGSFEMSGAADFEFKKYIIYGNVDLLTS
                     TGNSTFTHEMIHILEDEILNLAGRRQGQESESYAMGLLQSIATSNGYYYGFNMTEELA
                     ANASHNSSPSRLTSKEDLQKYLKGSFDTTYFLDALEAEEMLKLPKDQYKTLLRRIELE
                     LGETYSQNGHTYRDAFDKIRNLSESEWQAINLTKVEDLVTHNLQLANTINNIGTYLRD
                     NDKNYYFVSLYYPIYAGLLNNQGTVGGLQFRRTALELLAEKGWDQGFIPYVSNQLVQE
                     AQTNGKALTDEYIWNKLMPDYQDYASFKKARYQTSLTQKNTMKLIQISWQGQQYELKN
                     GQEIQALMKSAILADLASPQSSFQRQQLKEVLYKAFHEVSQEFKQSIFLP"
     gene            complement(13891..>20806)
                     /locus_tag="U1041_001047"
     CDS             complement(13891..>20806)
                     /locus_tag="U1041_001047"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017180.1,HMM:NF019142.1,HMM:NF019216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4768162.1"
                     /translation="HHLPTIDFQVQDKVEEIALEIPEEQIETDELAIGQSRVEEGQAG
                     SLRISYQEVLVDGQVVARKEISREEVPSTPKRTYIGTRRDEKYVAPAKLELPTVTIRT
                     QEEEIAFERKEVLRPDWPLGKVEVVAGKKGKQLHTYAVIEGVETLLKTEVLEQAEAEI
                     TYKGVNRPETTTEEIVIDFTERVISDPEQYTDYRQIEVTGEQGLKRLHKENGQLVNEE
                     IVKPAKEQVVRVGTKPIKGQVEKESLRTIEFTRRYESNDQLDYGQTRTKQPGQSGQEK
                     VISTYQTIKGVEGQFISSRIVPVRPVQDEIIEVGTKPQIRIEQEEPVIEYVPEPAKER
                     NVQTVLQEGHAKETTYRTVYNLDANSGQVIPIQLPGTVSHPGQVRRNSVGTKPTITKK
                     ALPFTEETIPNSTLYVGERVIVRPGRAGEEITTVHYTLDPRTGETSASQPLIQVIAAV
                     TQVVQVGTKAVDRTEETVDSRAIEFKTEYRADSTLPYPQREELQAGSNGLERITTTRH
                     YVRDKEVGEPSRVSEVVKAVQNRIIKVGTKPVVRRVETDFTRVYEADPNRSLNERHVK
                     QSGIKQETTYTKNYVLNTETGAVTEQAETSQVTRSARQEIVQVGTRPVDRTERVELSP
                     ITRQNAELVKGTENVIHEGSPTIRVYRTNYSVDPTTGQITTHPEVLVSETAGRAREVE
                     IGTKEPEQPVTPPTENEESCPIIPDNSDGGTCEAPTDPTEKPSSPDLECILNPTDQCW
                     PEEPEEVNQETVAQLRAKMEKLMSYRSRFRNPSWHTYIDAVYNESEKIIQSGVAADIR
                     TQLDAIDADLEFVIDAQIPKISTDANSGASRAENIELITDANGGTAPRYEDNPTPVTP
                     NPDQGSGTEKPVETPIPPVPPVDQEQPVPPVNPPVTPIPELEQPRPGIPDAKPVVPDT
                     PPVAPDSQPATPVPEPEQPNISETEPVSPEKPEETTEETVEDVNKPLLRVRDNKNHYQ
                     LFTKERSTKVFYALENKQENFNKGTARLYVNKELIKTVDFTKEKLEARFGKLLPNVDY
                     RIETEMEYRASDGTVKTAKLEDIVSVDFEERHFEIKNIDEAEVWKNENGKLVRKVSIK
                     VEPNDDHNYFIKLKSDESKDIFLPVVSIDEESLSGKRHFKLQAKFTNPEERRQKLSTY
                     HDTVTVYLPRESRERYSTFGNLLNAMKTQPFGTFELQQDLTASEVVLSDTDKSYLKNQ
                     FHGTLRGNGFTIHDLKVPLFDDLRGTVSDLNLKAVDIHLPKETKVGALAMKSENARVN
                     NVFAEGNVLSDSMVGGLVGEADRTQFTNVSYTGSLLSIGKNDSKLGGIAGWLGAGKIE
                     KGYVDATISAASSNVKAGGLVGQMENANTQILSSFATGRIITTKTKDTEVGGLVGAVL
                     QGNNIRIADSIAAVKAVNGHKVYGESQQGDTIFSNIKVVENLSTGEDNPNISLASSDD
                     VKANIEDRGLIKSHPTMQVSKTQNVFDIAYANEKYTLTDRKQAYENMEKLLPFFTRDV
                     IIQHANRLESSDSLVTKKLVDVVPMIDKTPVFDIIQNKDDINRLLLHFEDGTTEKHYL
                     VKKKELGSGAVVEYHLLDKNISYTPETYVRNTDIGSMIFELQNQFGAIQFKSDEVNKV
                     LGLPAYQPEKERQLLFLEESFERVKSNISTHLTDLISNYNLVGLDNSTIREYLKSYIS
                     KNKVQLLLGLAYMDKWYDIQFGDVKAKNLMMKKADFFGQNVNSLDQLIRIGSMGAEML
                     KPKNNYALASQVIAKESIDGDLFDYLEGYRKAFVPDKTTNDWFRTTTKATIIETNSRV
                     PEVLEKQTNPTKDIYKNGFYDKMASNHWMYKEMALILLAMPSKDIFILTDMANTLIGT
                     YAKLSGSDTDKENRLKQIAKEWAGHADYLYNILPEAHKEKMFRRVVTWDNKYIENTWR
                     DPADVSYYNMRIPAMKNFYIPLGHPHANRETGAHADYTIDNIYYFRHEATDPDGARVY
                     THEMTHVADDDTILLGHGKRTSLDYEVYARGLFESITWGDQDKLGLNTIYDFSPNEQQ
                     RYGRRLTNLSPERFKSSKDLQDYMKGYLDVIYTLDILEAEAVLSSSNSYAKQNWFNQL
                     ETQDRNSTVVKQANRTPTTLDQLIDSGMVSKRSYGLGSVTTENNYLVVNAFNPIYGSL
                     NNDGTSRNEYEVRKIAFELLAEYGYENGMVPYLSNQYQAELGKTEENRRIRDDELISK
                     ITGSTYSNSATFRKAMFEKRKQNLEKLKSVTLVGTGIQSGEGYFYGGTRTVSASELRQ
                     LMQEAVEHDANNNKYYSSNGHDVREQSRVYSLKAAILNGYLRETNDFRESIYKDTP"
BASE COUNT         5608 a         4747 c         3899 g         6552 t
ORIGIN      
        1 gagccttgcg gctccctttc aacttattca aaaaaatctt gaatagctcc ttctatttct
       61 ttcgcatcca cacttaacat tgaataatct ttctcaaaga aggacagaat ttgctgtcca
      121 tagcgtttgg tgtgaacacg cgggtccaaa accaagacta gtgaatcttg tttgtcatgg
      181 cgattggtac gcccgatggc ttgtttgagc ttaatcatca tcataggcag gctgtaatcg
      241 taaaatggat tcttcccttc ctcacgcaga tggtgattga ttttctggat aaaacggtcc
      301 ttgggattgt cgaatggcaa gcgtgtaata acctgaatca attgattctg actggcaaag
      361 tcaacgccct cccagaatac acctgtgccg agtaaaattt ggcattcccc tcgttcaaat
      421 ttgcgtttga gagtcatttc ctgtccatgc ttgtgctggg ctaggtgggg aatgttattg
      481 tcttctaaca aatccgacac ctgcaagagc agagaaatcg atgtgaacaa gaccaaaatc
      541 ggtcgtccca gctctgctat ttctcctaaa gtagtagcca aataagctgc atgctcctcc
      601 ttggtccaag cgagaatatc ggggagatgg gtcggaaaaa gcagctgctg gttggtcaca
      661 gtttgagtcg gtatcaaatc caaggtgacc tgctcaaagc ccagcaaatc cgccagactg
      721 acctttttgc tgatggtcaa ggttgcgctg atgcagaaaa tcttagtatc tggcaggtaa
      781 gtagccacat ttaagaggct gtccttggag ccccgcaaat aagcaatccg tttgtcctca
      841 agatactttt cctccagcca aaaatggtcg tagacatcaa ggagttggtc caggtcttgt
      901 aggtcaacat cttgtaactc agccagattc tgcttgactt gacccagttc gtcttttgaa
      961 acttctcgct gcccatgctg gcgaaaacgg gtcaagaggt ggttgagttc aaactggcag
     1021 gattcgtaga gccgttggtc taatagacta tctgacttat cttttttgct ctgcaatact
     1081 tgcaaaagag ctgttatatc ctgagaatcc gtcgctagat tttcagcagc caagaggaat
     1141 ttctgggcct cgtcgatgac cactaaacga ttgttcatca gtggatcttg atccttgaga
     1201 tgactgagga aataggcgtg gttggtgatg agcaaccggc tggataaggc ttgctggttc
     1261 aaaccttgcc aaaaatccca gccccagaag agactttctg gttccacatt tccgtcatgg
     1321 acaatctcat caaaataggc ttgatagcgc tgtttttgct taagctcatc caaatcacct
     1381 gtcgtggttt cgcataacca gacaagcacc tgcattttga attgattgac caggcgatta
     1441 tcatcctgcc tctgcagggt tttccagtag ttgtctaact tgataaaatg cttgggcgat
     1501 tttagagaga ctatgggaat acgaaatatc tctttaagct tactcccctc tttttccata
     1561 atctgctctt gaaggagctt ggtcggtacg atgaccaata aaggctggtc tgacttagca
     1621 agtaaaggca agagataacc gtaagtcttc cccaagcctg cctgtgcttg aataaaatgt
     1681 actttttctg catctgccaa gcgtttttct actacttgtg cgaaagctgt ttgctttttg
     1741 cgttcgtgca gaccaagaag ggcaagatta gttacaaaat cttccgataa gtggtaggct
     1801 ggctggtctt ttactggctt tttcaaaacc aagccgtgaa cactttctaa actggtcgaa
     1861 atcgtttctt ctaggtaagg caccatctca tcaatgacca tcctggattc aaagagcaga
     1921 ttgtccgcta aatcaagaat cttttcaaca acagttcgag gtaaactctt gattttctct
     1981 tgaattttga taagaagtcg agccgttgcc agagcatctg aaatagccgt gtgtgcctgg
     2041 tccagaccca agtccaaatg ctctgctaga ttgcccagac tgtatttatc aaaagtcggg
     2101 aaaaataatt gtgccaattc caccgtatcc acacgcggtg tcagcagttc atagccttca
     2161 aaaaagagtg cttctgccaa gagattggca tcaaatttga cattatgcgc tacaaaaata
     2221 gcatctccaa tcatgtcata aatggtactt gctacctgac caaaatcggg agcgtgactt
     2281 agctgttggt ctgtgatacc tgtcagattc ttgatatgat catccagtag ctcataggga
     2341 ttgatgtccg ttgcataact gtcaatgatt tctccatttt caaccagaac aatcccgatt
     2401 tgaatgattt ttgcatcggc acctgtacca gttgcttcca aatccacaac ggcataccga
     2461 ttgcttgttc ttctgtcttt catactgttc attatagcat attccctctc acggaaaaag
     2521 ctccaaacaa attccatgaa gtcgttggaa ttttttgtta gactactaat ataaaaactg
     2581 tttctgtgag gagaaatacc atgcttattc ataaatctgt caaccctgtt gcctttcaaa
     2641 atacctacta ccttgaaaat gatagccacc tacttgtcgt tgacccaggt agtgactggc
     2701 ctaaaatcca agctatgatt gaaaaaattg gtaaaccaat tgcggctatt ctcctgactc
     2761 acactcacta tgaccatatt atgagtttgg acatcctgcg tgaaagctac gattttccac
     2821 ctgtctatgt ggctgaaagt gaagccagct ggctctacac accagagatg aatctgtcag
     2881 gtctacctcg tcatgatgat atggaaaatg tggtctgccg acctgctgaa aacatcttcc
     2941 aataccaaga agactatcag tttgacggtt ttcatttcaa ggtagttcca acacctgggc
     3001 actctattgg tggtgtttcc tttatcttcc cagaggatga atgtgtcatc actggagacg
     3061 cacttttccg tgaaactgtg ggacgcacag acctgccaac cagcaacttt gatgacctaa
     3121 ttactggtat cagagaacat atctttaccc tgccaaacca ctacaccgtc catccaggtc
     3181 atggtcaaaa taccagcgtt ggacatgaga aaaatttcaa tccatttttt agactgtaaa
     3241 aataagtact gcccagttct gattgaacca ggcagttttt aatttaccac ataaccagtc
     3301 tctcttcggg tgccctatac attgggtcac cttcttgaat atggtagact ttataaaaat
     3361 catccatttg ctgtaattgg agattgaccc gaaattcctc aggagaatgt gtgtctacct
     3421 gaagttgata aaggccataa tcaaccgcaa ccatttctcg acggctacgg gcatagtgct
     3481 caaaaaattc ttttagattt gctgacggtt cttctttttt gagcgtagcc aaggcaatct
     3541 gtattcctcc caaatccgca agattttcag atagagtcag ttgcccattt attctaccac
     3601 cataaacttc cagaccatca aacaagtcta ctagggcttg attttttctt caaacgctag
     3661 tctatctcgc tctatccacc agtcttttag actaccagtc tcatcaaaat ttgctcctgt
     3721 ggcatcaaag gcatgaacaa actcatgagc gataattttg ccaatcccgc cataattctc
     3781 ggctacagat tgatttttgt cataataggg agcttgtaaa atagccgtcg gaatataaat
     3841 agcattctga ctaggagcat aggcggctgt tacttcactt gccgatacat tgctagccca
     3901 agtttgtcta tctattggct gactataacg ctcgaaaaca cctgttctag cttgaatcgt
     3961 aatagccaaa acattttcaa tataagacaa gtcttcacgc acctttaatg acttggtcca
     4021 gtcgctcaac tcccttggat agccgatatg ataagtgata ttttctaatt ttttaattgc
     4081 ggcttgcttg gtggcttgac tgagccattt attggctaga atcctttctt gataagtcct
     4141 agagattgcc tcagccattt cctgaatggc aagtaagtcc gtttcatcgg catagttatg
     4201 accataataa acacccaaac tttccttgaa cattccagtc acatccagat aagtcatgta
     4261 atcatttgga taggaggctg aaaacccttg gacttctgca tgaaatctcc ctgctgtctg
     4321 catgatttcc ccagtcaaat agggagctaa cttcattgct tggctaacca aagcccatga
     4381 tcgatattct gagaaatttt cttccttgat aaattgggat aattgttcaa aatagcttgg
     4441 attagaaaca taaacttcct ccggttccaa gcccaccagt cctactaatt gttctccaat
     4501 cgataaagct ggagagtagt ttttgacctg tgagaatgtt ctaagttctt ctgcgttcac
     4561 aggaccccaa tcactatgca cattctcact agctggtaga gtgtcaacga gtcgattgtc
     4621 aaaagcaatg gcaccttcaa ccaaagcagt agcctcctcg tctgagtagc cacatttttc
     4681 caaaatatgt ctcacagata tacggtaaga atccatgagt ttctcacgaa cagtcctgtc
     4741 ttcatagtag gacttatcag gcagaatcgt ctgaggtggt agtaaaatta gcattctttc
     4801 agatgtgttt cgtggattgg caatcacatc aagaccatag ggcaatggat agtccttacg
     4861 aatccaatct tgactaagcg atttcagctc ggaaaacgaa gtaattccca tcatttcatc
     4921 cagtatcatt ctagctactc tgacaccatc ttcttccctt ttggtaaaat caagaccttg
     4981 ctgatacaac ttgataaatt ctactaaatc ctcagactga ggctctagct gaccagctac
     5041 cattttgtca aaatccgatt ttaattgctc atctacttcc atttgcaatc ttgtaaactc
     5101 attgtagaat ggtgtaccac ttgataacca gccaccattt aaccagtcct tgtttatggc
     5161 ttgataaaaa ttagtttgga tagtcggttc tgctttttca acttgtgttt ggtcatctct
     5221 tattttctga ccaccacagg cagctaagag acagctaaaa ccaagcaaaa ccaatctcag
     5281 tagaccttgt tttatcacgc gtcactccct catttgtttt ccacaaacta tttcgacaga
     5341 caaagatgca gaaaataatt actcctccgc atcttgctct ttcttcagct ccccaatcgt
     5401 ctcaaaactt gctcgaccat ccgcagccag agcctcctgc tcgtaagcgt taataatctg
     5461 ggcaacgact ggatggcgaa ccacatcctt ggctgaaaaa tgtacgaaat caatctgtgg
     5521 aattttgctt agtttctctg tcgcatcaat caggcctgac ttaaccttgc gtggcaggtc
     5581 aatctggcta atgtctccat tgacaatcat cttggaatta aagcccagac gggtcaggaa
     5641 catcttcatc tgcataatgg tagtattttg cgcctcatcc aagataacaa aggcatcttc
     5701 cagcgtccga ccccgcatat aggccagcgg tgcaatctca ataatctctc gctccattag
     5761 gcgcgtggtc tgctccttgc ccaaaatctg gtagagggca tcatagaccg ggcgcaaata
     5821 aggatctact ttttctttta agtcccctgg taaaaagcct aaactttcgc ctgcttccac
     5881 cgcaggacgg gttaggacaa tccgcttgac ctgtccccgc ttgagggctg ttacagctag
     5941 agtaaccgcc aagaaggtct taccagtacc agctggtcca attccaaaca cgatgtcatg
     6001 acgctttacg ctgtccacgt agagtttttg tccaagggtc tttacgcgaa tgggtttgcc
     6061 gtagttgtcc ttgataattt cttcttcgta gagggcaacg aatttctcaa tctcatcatt
     6121 tttgaccata gaaatagccg tgaccacatc aggcgtattg atgatcaagc cccgattgac
     6181 caaaaccaat agggactgga taaccaaacg agcctgttcg acatgctctt cttgcccaat
     6241 cacttgaact ttttccgtcc gtgcatgaat aaccacacct agttcctgtt ccatcaatct
     6301 cagatggcgt tcattggacc caaaaaggct aaatagatca tctggatgtt ttaagtgaat
     6361 atcaatcgaa tgttctagca agaaacttct cctttggtag tttttctatt attataccaa
     6421 aattttccac caactgaatt ttcgaggtaa aaagaaaaca gtgaatatac gcgattcact
     6481 gtttcataga gtccgaacta tttatttcta tgtagggtaa cacagtaggg aggatgttcg
     6541 gctcttcaaa ccttcaattg tttgacactg gacagaacaa acgaatccag tagcatataa
     6601 tcaaaggtaa atgttgttag gattattttc atcctacata cctattatac cccccccgat
     6661 aaaatcaagt attttgaggg atgtagtcca tttatttata ccgctatcaa taaaagggat
     6721 taggggggaa tgactaacag tttctctgta tcctctattt tcgtagaaat actatctacg
     6781 gtaagaaaat actttgttta aattcttggc tcacttcatg aaaggccttg tacaagactt
     6841 cttttagctg ctgtcgttgg aagctacttt gcggacttgc caaatctgct agaattgccg
     6901 acttcatcaa agcttgaatc tcttgtccat ttttgagttc atactgttga ccttgccatg
     6961 aaatttgaat tagtttcatg gtatttttct gggtcaaact agtctgataa cgagctttct
     7021 tgaagcttgc atagtcttgg taatcaggca taagcttgtt ccaaatgtat tcatctgtta
     7081 aagctttacc attggtctga gcctcttgaa ctaattgatt gctcacgtat ggtatgaatc
     7141 cttgatccca acctttttca gctaaaagtt ccaaggcagt acgacggaac tgaagtcctc
     7201 caaccgttcc ttgattgtta agtagacctg cataaatcgg atagtagagc gatacaaagt
     7261 agtaattttt atcattgtct ctcaagtaag taccgatatt attgattgtg ttcgccaatt
     7321 gaagattatg agtaaccaga tcttctacct tagtcaagtt aattgcttgc cattcggatt
     7381 cacttagatt tcgaatttta tcaaatgcgt cacgatatgt gtgaccattt tgactataag
     7441 tttctcccaa ttccaattct attctacgca agagagtttt gtactgatct tttggcaatt
     7501 tcagcatttc ctcagcctct aaggcatcta agaaataagt ggtatcaaag gagcctttga
     7561 gatatttctg caaatcttcc ttgctagtta aacggcttgg actagagtta tgactggcat
     7621 ttgcagccaa ttcttccgtc atgttaaaac cataatagta accatttgaa gtagcgatag
     7681 actgcaagag acccattgca taagattctg attcctgacc ttgacgtctt ccagctaagt
     7741 tcaaaatctc atcttctaaa atatgaatca tttcatgcgt aaaggtagaa tttcctgtag
     7801 atgttaacaa gtccacattg ccatagatga tatacttctt aaattcaaag tctgccgccc
     7861 ctgacatctc aaaactacca tagtaaagtt ctgtcggtcc aaagaaatca tctataatgc
     7921 tgtaggaatc gccaaattcc gctgcccaac gacgacggtc attctcatcc ccccgtaatg
     7981 gttttccagc aggatccttg atattatatc cttcacgaac tgtgattagc ttagattcga
     8041 tagattgacg tgcagcgtca gataccaagg acttgataaa ctccatatat ctgttccaaa
     8101 tctgggcgtg ttttggaatc cgttgttctt gaatttcttt gaccttagct aggtacagtt
     8161 cgggctgact gatttgtaac tgatgatcta catatcgacc atagctacca aaaacaagaa
     8221 cgtttggaag tgaaacgagg taaagttggt cctcctctgg taggttcaac aacggcaaga
     8281 tataacggtg atagtcacta ttacctttaa tttgttcata aacctgtaca gacttagacg
     8341 gattacttat acttacttcc tcatgtataa aggctttgct agactcttta aaccaatttg
     8401 catctgtttt ttcaggtgag aataactggc gattcaactc taagtaagca aaaagatcct
     8461 gtccaactcc tacttgtttt tcaaatatct ttttgaaagt gattggtgct gcaaatggtg
     8521 ccaattcttt gtaagttaga ttaccaactt ctttcaacca atccaaagtt gaaagagatt
     8581 gtccatagaa atgcggttgg taaatagcta aattacgcaa gttaagttta tcaaagtcta
     8641 taccgtagta gcgtgccaaa taggtcaagg caagccagat ggattcttta ttgtcttcaa
     8701 cttgtttctg catataggca ttaatggctg aagtagcccc atttgtcacc cactgactag
     8761 ctaaaaatga acctaattcc tgatccaaat tatcttttaa tagttgctgg gttctcttca
     8821 gatagagttg tttcatacta atggttaaat cttgtttacc aagtttaaat cgtaactctt
     8881 ccaaataacc agccattttt gttttagttg cataagcatc agattctaca tccaagtctt
     8941 tgaaactatt acgaagtgtc gctacaagag atgtgctatt ttgtccactt acccactggt
     9001 atggtgtaaa gagtaaatct gttcctaaac gatattctaa tacacctgtt tggtcatatg
     9061 ctccttgata agctaagtca aagacttgaa catctttatc tgtgaagtaa accaaaagtt
     9121 tgtttacttg gctcggttgg gcagaaaaat ctgtcacaac ttccttatct tttagggcaa
     9181 caattgattg aatagacttg gttacaaata ctgaatcagt tgctaattta ttccccattc
     9241 gaacgatagt gtggcgatca tagaatggca agagtttaga catattttca taagcaacct
     9301 tcctatcttc tctaccattg cgtaagaggt gataagccac ttgctgatga cttgcttggt
     9361 ccaaattacc tgaagcatcc tgaatcggtt gcataaccct atccaagccc catgtagaaa
     9421 gaatctgctt aagctcttct gttgatttct gctgcgcctt gtgaccatta tcctcaactc
     9481 ctgtcgatac attttcttgc accaatacag tagttctggt tccgaccaaa agccctgttt
     9541 ctggcaattt taatgcggag gcaacattgg aaatacttgg catataacca actgcaacaa
     9601 gcccagctag agtattggtc tgctcagtat tagtcacttg tccctctaca aagactgaat
     9661 caatagtaga taaaatagca gttccaacta gtcctcccaa cctatcttgc atagagatac
     9721 gtggtgtaaa ggtagacgtc aagttcacat aggccttgcg caagctacta ccagacatca
     9781 acctaccaac caagccacca gaagtaattt gattgctagt tcggtgctca ttcaagacca
     9841 attctccctt gaaggaaacc gaatcaaatt gactactatt cgactcatag accagacctg
     9901 ctgcacctac ataagattga atacgaccag tcacatgaac attttgtatc tgactagtat
     9961 ttgcagtgat agctaaagca gctgctcgag catccccact ctccaatgct acattttcaa
    10021 gtaggatatt ttcaaccctt gctcctgtca ttgtttggaa caatggctta ttcaaattga
    10081 gaatacgata gaccttacca tccaagcctt ccaaacgacc acggaagttt tccacgtaaa
    10141 ccgtatcagt agttggacta gctaccaaat cagccgctaa tttgaaggtg ccgtctggtc
    10201 gtgccttcat ggcttgaatc aattgctgga agtctacata actatcttga gccaaaacaa
    10261 tcttcgaaac ttggaattta tccaggctct ctagttgatt ggaatctgcc tgatctctag
    10321 cctgaactaa ttttggcaaa cgaaccgcta tatcaaactg attgccgttt tccgtaatcg
    10381 tatcaactgc ccataaaaat tccttagaat ctggacttat gtaacgaaca aaatagttgg
    10441 ataggtcact cggtgcctgt aaaagtccag tcacctgctg gaattctcct gcttggtcac
    10501 gatagaacaa ttctctcttg ctaactctgt taaattcaat cgacttagga ctaatttcaa
    10561 atggcaaagt agcaaccgtt tcatctgcct gaccgtcttg ggtcctataa cgataggaca
    10621 gacgagcctg ataagctgca tagtgctgca aatctgtgac ttgaagcgaa ccatctaccc
    10681 caccatcata atttttttca acagttttaa cgagttcttg gccattatag atttctaggc
    10741 gaatgctttg caaagtattg tcaggatcag tgacatgata gtataaatca gcctgtgatg
    10801 tttcttcatt taccaccaag gcaccaccag cacgttcgct agccaaacgg accgttggtt
    10861 tttcgagtgg tttcggtggc acttcttcaa cttttttacc aactcgaata acttgatttt
    10921 gagcagcaac ctccacaatt tgtaccgaca atgtctctag ctctcccgtc gcttcattca
    10981 agcgatacga tgtcgttctg gttatgctac catctcgacc ggctgggcct tcaacttcct
    11041 caccttctgg caaggtgaaa tcatcctgac gtataacttg atgagggact ttttcactca
    11101 caactgtcga ttttgtacca acctcgatga tagctgcacg accttcagat atcacaaagg
    11161 attcttcggc ttgtggaaga cgctcccctg tctgaggatt aaccacatag tttgtacgat
    11221 acccaagtcg gcgttcttga gcagtgacca cttcttttcg ataaggcggt tccatatctt
    11281 ctctcgccct atatacggtt ggaagagtct gactaacttc acgaactgtt ggttgtgtac
    11341 caactgtgat aactgttgat tgaccctcat ctgtcacctt acgaactgat tcacttgcag
    11401 taacctctcc tgtgtttgga ttaacgctat aggtggtagt aagtgtcgat accttatctc
    11461 gacctgcttg gcgaactggc tcactagtcg tcggacgggt tgtatctgcc tgataaacga
    11521 ccggcaaagg ctcgcgaaga gtttccactt tcggctgggt accgactcga atgactggtg
    11581 attcacctgc ttctcgtaga gtaccttggt cacgttgact gcttacctga ccagtttctt
    11641 cgtctaatac ataagtagtc cgatatacgg tcaccttctc tcttccagcg aagaatgggg
    11701 tttgttgtcc gagtggaatg gtatcatcag cctcatagat tgctggcaag gcttctctga
    11761 cttcttcttc ggtagcctgt gtaccaactg tgataacttt atcaacggga gttgtgtaag
    11821 aaattcgttt tcttctaatt tcttctgttt tttgaccttt gatggtacga taggtcactt
    11881 caaaaacttc ttgacctgcc tggccctctg tttcctgcct aacaccaaaa gctaagtttg
    11941 gagcagcttg atagacagtt ccgtagtcta atgtctgaga aagattttca ataacagttc
    12001 cctcaatcgg cttgatgcct atgtgaacaa ttttttcttg cccttcttca gtctctactc
    12061 ggatgacttc cccgttgcga gaaatagttt ttctacgacc aggatatcct gcctgcactt
    12121 ccaaaatata atctgtatat tggtctgcaa gttcaacgat acgttcaaca agtggaagtt
    12181 cctcttcagt aacttcatcc acagcacttc ctacataggt tatctctggt tgagcaggtg
    12241 tgatttcctc acttttcaaa tgggtgcgta ctccattcaa ctcagcataa atttccctag
    12301 aaagaccttc tttcccagcc tcaacacgac tagtacctac tgccatagtt ggatctgaac
    12361 gttgttctct ctcaaatgga ataggcactt cttcactaac aataattgct tctggtatac
    12421 tgtgggtcaa tggttccact tctttagagt ccacacgtgt gccaacgtaa accttgcggt
    12481 tgatagctgg agttcccgta cgactgactt cgttactggc tatgacctta ccgtctacaa
    12541 tcacatcctg ataggtgatt tccaaaagac ctgtttgacc ttcgacagtc tctgtctctc
    12601 cttgggctaa gcgatctgtt tcaatacgct cttctaaaat aggcaagact tgttggtcca
    12661 ctcgctcttg caattcatac tccaagcgaa cagggggttg agcggtgggg gcatggtcgg
    12721 gaacctgggt ttcgataggt tgctcgggaa gctcttcaac ctttgttcca cgatagagga
    12781 tttcaggctt acctacctct tcaatgactt ctattaagcg actagactgg agattgtctc
    12841 ccaaccaact ttcttcatat cggtgaagat agtagccagc aacaccagcc tctagacgct
    12901 cctgcccaat agctaactca ggatcatcta ctaccactct tttcatttcc atcggaatct
    12961 tttcttcacg gtatttgata agaatttgtg gtaatgatgg ttcagtagaa tttggaattt
    13021 ccttatcagt taagtttggc tcatccaaac cagttgattt ttgtaagtta tcaagatttg
    13081 gaagagtaat attcgcatca ctggtcttcc cttcttcaac aatataaccc acaaaatcat
    13141 aggaatctag ttttaattta ccatcaggca agacatcccc agctttgacc gtcaccgtct
    13201 gattaaaacg agctaaggca tgactctgca gtgcctcaat ctgtaaaaca ggtaggactg
    13261 tcccagaaat agtaatatag agcaaacttg taactctggc tttctttgag ctaattgccc
    13321 gtattccaat aagcaaaaaa cctgccgcta accaacctgc tacctgagag acaacctctc
    13381 ctgtcacagg taggactttg gaaggatgcg gacgataaac cacaaaatag gtcgcctctt
    13441 gacgcaattc ctctggtaga ttctgaacaa ttctgttttt ctcttctgga cttaactcct
    13501 cttctaagag gtactggaaa tgaatttctt gattggactt ggcaatcctc tcactcgctt
    13561 ctacctgtaa tccagatagg cttgataaga gaagtccact accaatgcag agtgaaacca
    13621 ctccgataga taatttcctt attgaaaaga tggagtgtcg atattgtttc attttctaaa
    13681 ccttctcctt tatacaatat agaattaaga tatcgctttt attatatcac gaattcgcaa
    13741 attaacattc atcaattatg caatcacact agctccgcta aaaatttcct ttctatattt
    13801 ctgtaagatt taatagaata cctttctgac aaaaaagcca agcagtgaac atcctgtcca
    13861 ctgctcatct atttgtgcat aattcactct ttatggagta tccttgtaga tagactccct
    13921 gaagtcattc gtttcacgaa gatagccatt tagaatagct gcttttaagc tgtagacacg
    13981 ggattgctct ctaacatcat gaccattcga tgagtaatac ttattgttat tagcatcatg
    14041 ctcaacagct tcttgcatca actgtcgaag ttcgctagcg gacacagtac gagtaccacc
    14101 gtagaaataa ccttcaccac tttgaattcc agtacccact agagtgacag atttcaattt
    14161 ttccaaattc tgtttacgtt tttcaaacat cgcttttcgg aaagttgcac tgttcgaata
    14221 ggtagaacct gtaatttttg aaattaactc atcatctcta atacgacgat tctcttcagt
    14281 tttacccaat tcagcttgat attgattaga tagataagga accataccat tttcataacc
    14341 atactccgct aagagttcga aggcaatctt ccgcacttcg tactcgttac gactagttcc
    14401 atcgttgttt aaagaaccat aaatcggatt aaaagcgttc actactaaat aattgttttc
    14461 tgttgtaacc gatccgagac cataagaacg cttagaaacc ataccactat caattagttg
    14521 atcaagcgta gtaggagttc tattagcctg ttttactact gtagaatttc tatcttgagt
    14581 ctccagttgg ttaaaccaat tctgttttgc ataactattt gaagaggata aaactgcctc
    14641 agcttccaaa atatccaagg tatagataac atctaagtag cccttcatat agtcttgtaa
    14701 atctttagac gatttaaatc tctctggact caaatttgtc aatcgtctac cgtatctttg
    14761 ctgttcgttt ggactaaaat cataaatagt attcaagcct aacttatctt gatctcccca
    14821 agtaatagac tcaaataaac cacgcgcata gacttcgtag tccagactag tacgttttcc
    14881 atgcccaagc aaaatagtat catcatcagc tacgtgagtc atttcatgag tatagacacg
    14941 tgctccatca ggatctgttg cctcatgtct aaaatagtaa atattatcaa tcgtataatc
    15001 agcatgtgct cctgtttccc tattggcatg cggatgtcct agaggaatgt aaaaattctt
    15061 catagctggt attctcatgt tatagtaaga aacatctgct ggatctcgcc aagtattttc
    15121 aatatattta ttatcccatg tcactactcg acggaacatt ttttccttat gtgcctctgg
    15181 tagaatattg taaagatagt ctgcatgacc tgcccattct ttagctatct gttttagacg
    15241 attttcctta tcagtatcac taccacttaa tttagcatag gtaccaatca aagtattggc
    15301 catatcagtc aagataaaga tatccttgct tggcatagct aggagtatca aggccatttc
    15361 cttgtacatc caatggttgc tagccatttt atcatagaaa ccattcttat aaatgtcctt
    15421 ggtcggattg gtttgttttt ctagcacttc tggcactctt gaattggttt caataatagt
    15481 agccttggtc gtcgttctaa accagtcatt cgtcgtttta tctggaacaa atgccttacg
    15541 ataaccttct agatagtcaa acaaatcacc atcaattgac tccttggcaa tcacttgact
    15601 tgcaagagca tagttgttct tcggtttcaa catctctgct cccatgctac cgatgcggat
    15661 gagttgatcc agagaattaa cattctgacc aaagaaatct gccttcttca tcatcaagtt
    15721 cttagctttg acatcaccaa actgaatatc gtaccacttg tccatatagg ccaaaccaag
    15781 taggagctga accttgtttt tgctgatata agacttcaga tattcccgaa tagtcgaatt
    15841 atccaagccg actagattgt agttggaaat caaatcagta agatgagttg agatattaga
    15901 cttaacacgt tcaaaggatt cttccaagaa taacaactgt cgttctttct ctggttgata
    15961 agctggtagt cctagaacct tattcacttc atctgacttg aactgaattg caccaaactg
    16021 attctgcaat tcaaaaatca tagatccaat atctgtattt cggacatagg tttctggagt
    16081 atagctgata ttcttatcta ggagatggta ttcaacaaca gccccactac ctagctcttt
    16141 cttcttaaca agataatgtt tctcagtcgt tccatcttca aagtgtagga gcaaacgatt
    16201 gatgtcgtct ttgttttgta taatatcaaa gactggagtc ttatcaatca tcggaacaac
    16261 atctaccaat ttcttagtaa ccagagagtc actactttct aaacgattag cgtgctggat
    16321 aatcacatct cgtgtgaaga aaggaaggag tttttccatg ttttcgtagg cttgcttgcg
    16381 gtctgttaaa gtgtatttct cattagcata agcaatatcg aatacattct gagttttaga
    16441 cacctgcatt gttggatgac tcttaataag acctctatct tctatattag ctttaacatc
    16501 atcagaactt gccagactaa tatttggatt atcctcacct gttgaaaggt tttctacgac
    16561 cttaatattg gagaatatgg tatctccttg ctgactttcg ccatacacct tatgaccatt
    16621 tacagctttc actgctgcaa tactatcagc aatacggata ttattccctt gcaagactgc
    16681 accaactagt ccaccaactt ccgtatcttt tgtcttggtt gtaataatcc tacctgtcgc
    16741 aaagctcgaa aggatttgcg tattggcatt ttccatttga ccaaccaagc caccagcttt
    16801 cacattcgaa gaggcagctg aaatggtcgc atctacatag cccttttcaa tcttaccagc
    16861 accaagccag ccagcaatac cgccaagctt actatcattt ttaccgatac ttaacaagga
    16921 accagtataa ctcacattcg taaactgcgt tcgatcagcc tcaccaacta accctccaac
    16981 catactatca gaaagaacat ttccttcagc aaatacgtta tttaccctcg cattctctga
    17041 tttcatggcc aaagcaccga ctttcgtttc cttcggcaga tgaatatcta ctgcttttag
    17101 gttcaaatca gagactgttc ctcgcaaatc atcaaatagc ggtactttca ggtcgtgaat
    17161 ggtgaaacca ttacccctaa gagttccatg gaattgattt ttcagataag atttgtctgt
    17221 atccgacagc acgacttctg atgccgtcaa atcttgttgg agttcaaagg taccaaatgg
    17281 ttgagttttc attgcattta acaaattacc aaatgtactg tatctctctc tagattctct
    17341 cggtaaataa accgtcacag tatcatgata ggtgcttagt ttttgccgtc tttcctctgg
    17401 attggtgaat tttgcctgta gtttgaaatg acgtttacca ctcaatgatt cttcgtcaat
    17461 gctcacaact ggtaagaaaa tatccttaga ctcgtctgat ttgagtttga tgaaataatt
    17521 atgatcgtca ttcggctcta ccttaatcga aacctttctc accaatttac cattttcatt
    17581 cttccaaact tctgcctcat cgatgttctt gatttcaaaa tggcgttctt caaagtcaac
    17641 cgaaactata tcttcaagtt tagctgtctt cacagttcca tcgcttgcac gatactccat
    17701 ttctgtttca attcgatagt caacattagg taatagtttt ccaaaacgag cttctaattt
    17761 ttctttagtg aaatctactg ttttgataag ttccttgttc acatacaatc ttgcagtccc
    17821 tttattaaag ttctcttgct tattctctag tgcatagaag acttttgtgg atcgttcttt
    17881 tgtgaacagt tggtagtgat ttttattatc acgaaccctc aacaaaggct tattcacatc
    17941 ctcaaccgtt tcttcagttg tttcctctgg tttttccgga gaaactggtt ccgtttcgga
    18001 tatattaggt tgctctggct ctggaactgg agttgctggt tgtgaatcag gtgccactgg
    18061 tggagtgtct ggtaccactg gcttagcatc tggaatacct ggtcttggct gctccagttc
    18121 tggtattggt gttactggtg gattcaccgg aggaactggc tgttcttggt caactggtgg
    18181 cactggtgga atcggagtct ctacaggttt ctctgtgcca ctaccttggt ctggattagg
    18241 ggtaacagga gtcggattat cctcatatct aggagcagtg ccaccgttgg catctgtaat
    18301 caattcaata ttttcagctc tgctagcccc gctattggca tctgtactta tttttggaat
    18361 ttgtgcatct ataacaaatt caagatcagc atcaatagca tctaattggg tacgaatatc
    18421 cgctgctaca cctgattgaa taatcttttc tgattcattg taaacagcat caatataagt
    18481 atgccaactt ggatttctaa atcgtgaacg ataagacatc aatttttcca tcttcgcacg
    18541 aagttgagca actgtctctt gattaacttc ttccggttcc tctggccagc attgatcagt
    18601 tggattcaga atacattcaa ggtcaggtga acttggtttt tcagtcggat cagttggagc
    18661 ttcacaggta ccaccatccg aattatcagg aataatcgga caagattctt cattttctgt
    18721 tggtggtgta actggttgct ctggctcttt agtgccaatt tcaacttctc ttgcccgtcc
    18781 cgctgtttca gaaacgagaa cttctggatg agtagtaatt tgacccgttg taggatctac
    18841 agaataattt gtccggtaga ctcttatcgt tggactacct tcatgaataa cattttctgt
    18901 tccttttacc aattcggcat tttgtctagt aatcggtgat agttccactc tttccgtccg
    18961 gtctacagga cgagttccaa cctgaacaat ttcctgtcta gcagagcgag tgacttggct
    19021 ggtctctgcc tgttctgtta ccgctcctgt ctcagtatta agaacatagt ttttagtata
    19081 ggttgtttcc tgcttgatgc cagattgttt aacatgacgc tcgttcagac ttctgtttgg
    19141 atccgcttca tagacacgag tgaaatctgt ctctacacgg cggacaactg gtttggttcc
    19201 gactttaata atgcgatttt gaacagcttt aacaacttca cttacccgag aaggttcacc
    19261 gacttctttg tcacgaacat aatgacgagt agtagtgatt cgctccaaac cattactacc
    19321 ggcttgtagc tcctctcgtt gaggatatgg taatgtagaa tctgctcgat attctgtctt
    19381 aaattcaatg gcacgactat caaccgtctc ctcagttcgg tccacagctt tcgtaccaac
    19441 ttgtacaacc tgtgtcactg cagcaatcac ttgaatcaga ggctgacttg cactggtctc
    19501 gccagttctt ggatccaagg tataatgtac tgtcgtaatt tcttccccag ctcttccagg
    19561 tcggacaatc acacgctcac caacatagag agtggaatta gggattgttt cttctgtaaa
    19621 tggcaatgct ttcttagtaa tagtcggctt agtacctaca ctgttccttc gaacttgacc
    19681 tggatgacta accgttcctg gcagttgaat cggaatcacc tgaccactat tggcatccaa
    19741 attatagaca gttcgatagg ttgtttcttt tgcatgacct tcttgaagaa ccgtttgaac
    19801 attccgttcc ttagctggtt ctggtacgta ctctatcaca ggttcttctt gttcaatccg
    19861 aatctgtggt ttcgtgccaa cttcaataat ctcatcttga actggtctaa ctggaacaat
    19921 ccgactagaa atgaattgcc cctctacacc tttgattgtc tgataagtcg aaatgacctt
    19981 ttcttgaccg ctttgacctg gctgcttggt tctagtctga ccatagtcga gttggtcatt
    20041 gctctcatac cgtcttgtaa attcaatggt gcgaaggctt tctttttcta cctgcccttt
    20101 aataggcttg gtaccgacac gaaccacttg ttccttagct ggtttgacaa tttcttcatt
    20161 gacaagctga ccattttcct tatggagacg ttttaatccc tgttcaccag taacttcaat
    20221 ctgacggtag tcggtgtatt gttctgggtc tgaaattaca cgctcggtaa aatcaatgac
    20281 aatctcttct gtagtcgttt ctggacggtt gacaccctta tatgttatct cagcctctgc
    20341 ttgctccagt acttccgtct tcagtaaggt ttcaacaccc tcaatgactg cataggtatg
    20401 gagctgtttc ccttttttcc cagctactac ctcaacctta ccaagaggcc aatccggtcg
    20461 aagaacttct tttctttcga atgcgatttc ctcttcttga gtccgaatgg tcaccgttgg
    20521 aagttctagt ttggctggag caacatattt ctcatctcgt ctggtgccga tgtaggttcg
    20581 ttttggtgtt gaaggaactt cctcacgact aatctcctta cgggctacaa cctgaccatc
    20641 aaccaagact tcctgatagg aaatgcgtag acttcctgct tgaccctctt caacgcgact
    20701 ctgaccaatc gccaactcat ctgtttctat ctgttcttcg gggatttcta aagcaatctc
    20761 ttccaccttg tcctgaactt gaaaatcaat ggtcggtaag tgatgg
//
LOCUS       DASFQS010000035        20498 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.035, whole genome shotgun sequence.
ACCESSION   DASFQS010000035 DASFQS010000000
VERSION     DASFQS010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20498
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.035"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            146..1180
                     /gene="hrcA"
                     /locus_tag="U1041_001048"
     CDS             146..1180
                     /gene="hrcA"
                     /locus_tag="U1041_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEM4768163.1"
                     /translation="MITQRQNDILNLIVELFTRHHEPVGSKALQEMIASSSATIRNDM
                     AKLEQLGLLEKAHTSSGRMPSRAGFQYFVNHSLNLEHIDEEDVYQVVKAFDFEAFKLE
                     DILERASQVLADLTGYTSVILDVEPTSQQLTSFDIVQLSSHDALAVLTLDQSKPVTVQ
                     FAIPKNFLTRDLEVLKRLVDERFVGQTVLAIHYKLRTEIPQVVQRYFTTTDNVLDLMD
                     YIFSNLFQESVFISGKVASLTYGNLATYQLLDSPQLLAPELRQGLAPDQQTSISVAEH
                     SDPALADVTVIHHRFPIPYRGMGQMSLLGPVDMNYRRQMSLINIISRVLFMKLTDYYR
                     YLSSNHYEVN"
     gene            1193..1705
                     /gene="grpE"
                     /locus_tag="U1041_001049"
     CDS             1193..1705
                     /gene="grpE"
                     /locus_tag="U1041_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEM4768164.1"
                     /translation="MSEEIKNEEIVEGVEATEEVVETPEKSELDLANERAEEFENKYL
                     RAHAEMQNIQRRANEERQTIQRYRSQDLAKKILPSLDNLERALQVEGLTEDVKKGLEM
                     VQESLIQALKEEGVEEVATDVFDPNLHMAIQTVPATDDCPAEHIAQVFQKGYKLHERL
                     LRPAMVVVSE"
     gene            1932..3755
                     /gene="dnaK"
                     /locus_tag="U1041_001050"
     CDS             1932..3755
                     /gene="dnaK"
                     /locus_tag="U1041_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEM4768165.1"
                     /translation="MSKIIGIDLGTTNSAVAVLEGTEAKIIANPEGNRTTPSVVSFKN
                     GEIIVGDAAKRQAVTNPDTIISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAE
                     EYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDK
                     DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDHMVAEFKKEN
                     GIDLSADKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGAAGPLHLEMTLTRAKFD
                     ELTYDLVERTKIPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKS
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSK
                     SQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDK
                     NGIVSVKAKDLGTQKEQTIVIQSNSGLTDEEIDRMMKDAEANAEADKKRKEEVDLRND
                     VDQAIFATEKTLKETEGKGFDAERDQAQAALDELKAAQEANNLDDMKAKLENLNEKAQ
                     ALAVKLYEQAAAAQQAAAGQEGAQTANNAGDDVVDGEFTEK"
     gene            4342..5478
                     /gene="dnaJ"
                     /locus_tag="U1041_001051"
     CDS             4342..5478
                     /gene="dnaJ"
                     /locus_tag="U1041_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEM4768166.1"
                     /translation="MNNTEFYDRLGISKDASQDEIKKAYRKLSKKYHPDINKDPGAED
                     KYKEVQEAYETLSDPQKRSAYDQYGPAGANGGFGGGAGGFGGFDGAGFGGFEDIFSSF
                     FGGGGATRNPNAPRQGDDLQYAVNLKFEEAIFGVEREVSYNREATCRTCTGSGAKPGT
                     SPVTCGRCHGSGVINVDTQTPLGTMRRQMTCDVCHGRGKQIKDPCTTCHGTGHEKQAH
                     TVTVKVPAGVETGQRIRLAGQGEAGFNGGPYGDLYVVIQVQPSDKFEREGTTIHYKLN
                     LNFVQAALGDTVHVPTVHGDVDMVIPEGTQTGKTFRLKGKGAPSVRGGVIGDQYVTVN
                     IVTPTGLNDRQKAALKEFAAAGNIDVKPHKKGFFDKVKDAFDEL"
     gene            5571..7016
                     /locus_tag="U1041_001052"
     CDS             5571..7016
                     /locus_tag="U1041_001052"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEM4768167.1"
                     /translation="MWKDATEMALAVRTGQVSAKELVADAIERIEEENPALNAVVSKQ
                     YEQALQEAETGDFQDKPFGGVPLLLKDLGQNEEGHLSTAGSRLFQNYRAGHTDKLVQA
                     FKDMGFIILGRTNTPEFGFKNISDSSLHGPVKLPLDLSRNAGGSSGGAAAAVASGMVP
                     LAAASDGGGSIRIPASFNGLIGLKPSRGRIPVGPISYRGWQGASSNFALTKSVRDTKH
                     LLYHLQTYQVEAPFPLALLSEQSLLAPQDKPLKIAYSLESPIGSSVSADAKQAVLSLL
                     PQLEALGHQITELASPILDGLEVMQAYYLMNSVETAQMFDEIEAGLGRPMTPDDMEIM
                     TWAIYQSGQTIPAKLYSKVLQDWDRYSAIMADFHQHYDLLLTPTVADVAPKLNQFTHS
                     QEMLDRLLHMQELAMAEQQSLIWEMFADSLAWTPFTQQVNITGQPAISLPTYKTPQGL
                     PIGVQFTAAKGREDLLLHVADQLEQARLLHL"
     gene            7138..8013
                     /locus_tag="U1041_001053"
     CDS             7138..8013
                     /locus_tag="U1041_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000751024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4768168.1"
                     /translation="MLKKVLASALLVSTLTLAACSSSSSNTSSSSAEQTQWEKIQEAG
                     VLKVATPGTLFPTSYYNDAKELVGYEIDMINEIGKRLKLEIEYQEIGVAEAFTAVDSG
                     KVDISVNNFDMTEARKEKYNFSIPYKYSVGGYIVREDGSSGIEAADLSDWTDKKAGGG
                     AGTQYMKIAEKQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVMAIKWANANFP
                     DIKVKMGDAKYNPTEQGIVMSKADTSLKEKIDEALEAMKADGTLKAISEKYYAGQDLT
                     VPVENADELPVIEVE"
     gene            8104..8775
                     /locus_tag="U1041_001054"
     CDS             8104..8775
                     /locus_tag="U1041_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4768169.1"
                     /translation="MDINWQAVFNADIAREAIPQILEGLPYTLSLSLIGFALGTFCGF
                     FVALMRMSKFGPLRWLAMAHISLMRGIPLMVLLFFIYFGLPFMGLQLDAISASIIAFT
                     SMSSAYISEIIRASLSAIDKGQWEAARSLGLRTNVIYRKIIIPQAFRIALPPLSNVLL
                     DMVKSTSLTAMITVPEIFNKAKIVGGAKSDYMTVYICVALIYWVVCTLYAFGQLKLEK
                     RLATY"
     gene            complement(8813..9283)
                     /locus_tag="U1041_001055"
     CDS             complement(8813..9283)
                     /locus_tag="U1041_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768170.1"
                     /translation="MKKYISLFALCMMIPCLSACHSVTSEVNKEIQNELTAAPIETEK
                     ALKTDESLAKIENFQQIVEITTSKGEFSLESPFSGKIYLMATKENLEKLSKEEFTLNE
                     HSFSTIDAGSSNDFNIRYKKQTYFTVQSLSVQDLEDFEYTKSSSTSAILVFYPD"
     gene            complement(9295..9801)
                     /locus_tag="U1041_001056"
     CDS             complement(9295..9801)
                     /locus_tag="U1041_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HEM4768171.1"
                     /translation="MNKKIFFNIVIQLLTFIRYGLIALTGLIMLALLILLIGGKPIQN
                     SLRLDVPLPIIVLILIISILLVACFIYMATILKKLLINFQTGTIFSTENVVYTKIILG
                     TLIIWTSIQFASAFFLSYLDLKNVSDLYDFSLSDYFINGVLIIIALLAKMVLEKGVLL
                     QAENDEII"
     gene            complement(9803..10018)
                     /locus_tag="U1041_001057"
     CDS             complement(9803..10018)
                     /locus_tag="U1041_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768172.1"
                     /translation="MDMIRVNLDKILKDRQMTSKDLAEQVGITEANLSILKTGKAKGI
                     RFNTLMSICRILDCQPGDILEYVREGK"
     gene            complement(10020..10544)
                     /locus_tag="U1041_001058"
     CDS             complement(10020..10544)
                     /locus_tag="U1041_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768173.1"
                     /translation="MKTNLLKITGIVAACVRYFFYFMIALYAFITLVGLGGHSFVIDS
                     WEYTFNKPIDQISVWIILLTTGLILVVLVALSHIAHLLQKLCKLLLEEDYFASASLEL
                     YQKLFISLLVLTAGQFCLTTLFFLTHDTVPNTFLNLRWSDFILNALFIFLTYFVWRLV
                     QKGRQLATENSEFI"
     gene            complement(10678..12546)
                     /locus_tag="U1041_001059"
     CDS             complement(10678..12546)
                     /locus_tag="U1041_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011528775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEM4768174.1"
                     /translation="MTLVNNLKNHLHIVTTSLCLLLILIGIFLLQTNQGATPILFISA
                     FVIGGYQSAKEGISELIFDKHLSVDLLMILAAIGSGLIGYWMEGALLIFIFSLSSTLE
                     ELAMEKSKNAIAALMNMTPPTARKIEENGDITVLDTVAIRIGDLLQVRKGDTVPLDAT
                     LISPQSIFDESMITGEPLPAEKMAGAAVIGGTINQGPTVTVQVTAEKGDALFDKIVQM
                     VENAQESKSQTATFIENMEDTYVKVVLVVVPLFILFAHFALGWDWLTAFYRGMILLTI
                     ASPCALVASSSPATLSAISRAARKGMIIKGGDIADNIANLEAIVFDKTGTLTIGKPEV
                     VGACYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIALQSLEDVTGNGLVAGY
                     QGDSWKIGKAGFVVDSLVRPLSVDLVAQIDEAESTGKTLVYVSQNDVLVAIFMVEDSL
                     KPESKQLIAQLKEMGVTPILLTGDQEKTAHYVASQVGIERVIANCLPTDKATIIQELQ
                     TEFASVGMVGDGINDAPALAQANVSYAMGSGTDIAMESADIVLMEDLTRIPYSIRLSK
                     KMRGIIKQNIVFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK"
     gene            complement(12695..13156)
                     /locus_tag="U1041_001060"
     CDS             complement(12695..13156)
                     /locus_tag="U1041_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEM4768175.1"
                     /translation="MELHSHLNAENQTAFEHVIQHLKEKGVRITETRKAVVAYIIDSD
                     DHPSAEMIYKDLLPNYPNMSLATVYNNLKLLLEEGFVTELKRTNDNTTYYDFMGHEHL
                     NVICEVCGKITDFMDVEIPSLKREAHEQTGYKITKEVLSVYGICPDCQLNS"
     gene            13316..14065
                     /gene="truA"
                     /locus_tag="U1041_001061"
     CDS             13316..14065
                     /gene="truA"
                     /locus_tag="U1041_001061"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEM4768176.1"
                     /translation="MTRYKAIISYDGHDFSGFQRQPHARTVQEEIEKTLVRLNSGQPV
                     TVHGAGRTDAGVHAYGQVIHFDLAGSRDAEKLRFALDTQTPEDIDVVSVEQVADDFHC
                     RYAKHSKTYEFLVDIGRPKNPMMRHYATFYPYDLDLSLIEEAIQDLVGTHDFTGFTAS
                     GTSVEDKVRTITAATMEYDQRRQFLIFTFSGNGFLYKQVRNMVGTLLKIGNGRMPVGQ
                     IKRILAEKDRGLAGPTAAGNGLYLKEIIYED"
     gene            14055..14816
                     /locus_tag="U1041_001062"
     CDS             14055..14816
                     /locus_tag="U1041_001062"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004184219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEM4768177.1"
                     /translation="MKTKYILALSGNDIFSGGGLHADLTTYAVHKLHGFVAVTCLTAM
                     TEKGFEVIPTDAAVFAQQLASLKDVPFSAIKIGLLPTVEIAEQALAFVKAHQEIPVVL
                     DPVLVCKETHDTEVSQLRDELLKFLPYVSMITPNLAEAQLLLQKDIKTVEEMKQAAVA
                     LYDFGAKAVVIKGGNRLGGPEAVDVFYDGQEIVVLQSPLLSENNVGAGCTFASSIASQ
                     LLLGQEPLEAVRLSKDFVHAAIEKSDDYGVIQYEK"
     gene            14806..15291
                     /locus_tag="U1041_001063"
     CDS             14806..15291
                     /locus_tag="U1041_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4768178.1"
                     /translation="MRNKKTQELVLLAILTALSLVLAFIHVPTPTGFFTLLDVGVFFT
                     AFYLGKKEGAIVGGLAGLLIDFLLGYPHWAFFSLVFHGAQGYFAGWTGKKRILGLVLA
                     TLSMVGGYFVASSFMYNVADAVTSLMSNTLQNTVGLVVGYVLAQAIERIGAVNHVIKG
                     N"
     gene            15272..15838
                     /locus_tag="U1041_001064"
     CDS             15272..15838
                     /locus_tag="U1041_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01440 family protein"
                     /protein_id="HEM4768179.1"
                     /translation="MSLKEIKEQTQQVVQEVLELSNLQKGQIFVLGLSSSEVIGGHIG
                     KNSSLEVGEVVVETILEILELKGIYLAVQGCEHLNRALVVERELAIQKDLEIVNVLPT
                     LHAGGSGQLAAFKYMKDPVEVEFITAQAGVDIGDTAIGMHIKHVQVPIRPSLREIGQA
                     HVTALASRPKLIGGVRAAYQEDKIRKGS"
     gene            15838..16452
                     /locus_tag="U1041_001065"
     CDS             15838..16452
                     /locus_tag="U1041_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1349 domain-containing protein"
                     /protein_id="HEM4768180.1"
                     /translation="MKEFTVKDLVWTRPPRQFTISDEEITITTHPQTDLWQKTYYHFV
                     NDNAPVLQMETEEDYFSFTVKTDFAGSHTRFDQCGIVLYQDSENWLKCSIEYENDDFQ
                     HLGSVVTNHGFSDWATTAISSQIKSMWFRLSRRGADYCFENSEDGIHFKQMRVCHFHQ
                     GTGKIAFGLYACSPENSSFTARFTNMELSDCKWQAHDGQEPDEI"
     gene            16726..17157
                     /locus_tag="U1041_001066"
     CDS             16726..17157
                     /locus_tag="U1041_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM4768181.1"
                     /translation="MDTKFSVALHILTMISESKEILSSQALAESVGTNASYIRKVIAL
                     LKNAGLITSHQGRSGYQLSKSPKDISLLEIYLATQEVEHIRLFQIHQNANLTCPVGQH
                     IEGAMVPIFSSVEQELENQLSRQSLDNVITNLYQSAQATRI"
     gene            17237..18238
                     /locus_tag="U1041_001067"
     CDS             17237..18238
                     /locus_tag="U1041_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEM4768182.1"
                     /translation="MKAAQHTSYNKNNITLNLTEIAKPQIKPNQVLVKVTAAGVNPLD
                     NMISRGDVKLIVPYKLPQTAGNELVGLIEEVGATVTNFAAGDRVFGRLPLDSIGAFAE
                     YVAVDAQALAKVPAYLTDEEAAAVPLTALTIMQALDLIGAQAGKTIFISGGTGGVGGM
                     AIPIAKAKGLTVITNGDAASAERVLSLGADQFIDYKTEDYTKTLNNVDYVLDTLGGAE
                     TEKQMTIMKKGGQLVSLRAMPNGEFAKRMNLPKWKQILFGLAGRSFDKMAKKYGVHYH
                     FIFVESNGRQLQEVADIFSKLEIKPSIDTVYPFEEVNAALDKVANGRSRGKTVLSFN"
     gene            18264..19109
                     /locus_tag="U1041_001068"
     CDS             18264..19109
                     /locus_tag="U1041_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM4768183.1"
                     /translation="MSYITTKNQYITVSNNKIAYRELSKGKSDLPLVMLVHLAATLDN
                     WDPKLLDLLAEKHHVIVLDLPGVGASQGKVAPTIPGMAEQAVSIIKALGHEKINLLGL
                     SMGGFIAQEIVRLDSQLVNRLILAGTGPRGGFEVDKVTGKTFRYMLKAGLERVDPKRY
                     IFYNHDEAGRLEAEKVLGRMGQRSAAHADKDMNVPGFLTQLKAIKRWGREPQDDMTFI
                     TQPTLIVNGDKDMQVPTENSYTMHEKIKNSQLIIYPNAGHGSIFQNAEEFSKTLLAFL
                     EESNA"
     gene            19102..19239
                     /locus_tag="U1041_001069"
                     /pseudo
     CDS             19102..19239
                     /locus_tag="U1041_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637456.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     gene            19380..20009
                     /locus_tag="U1041_001070"
     CDS             19380..20009
                     /locus_tag="U1041_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019335829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HEM4768184.1"
                     /translation="MKIAVVAANGKAGSLIVKEAAARGFEVTAIVRSENKTVAQQVLQ
                     KDVFDLTADDVIRFDAVVDAVGAWTADTVHMVPDAAKHLAAILKDSQTRLLVVGGAAS
                     LYVNPEHTLTVADVTEFPAEVLPVLNAHKEALEALRQVDDVNWTYVSPAGDFQADGER
                     TGRYILGGEELVLNSKGESVISYADYAIGMIDEIASGNHLKARISLVSE"
     gene            20019..20468
                     /locus_tag="U1041_001071"
     CDS             20019..20468
                     /locus_tag="U1041_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM4768185.1"
                     /translation="MQISNKFTIAIHALAFIHLFQDQQRVTSKVLANSIQANPVIIRS
                     VLSGLKDAGIVDAKQGSGGFRLAKPLDDISLYDIFVTVDNIDKKGLFNFHENPHPDCI
                     VGGNIHAAVDDKLVQVQTAMEKELKTMYMSDVLVDLEKAIEEKAKRT"
BASE COUNT         5883 a         4270 c         4834 g         5511 t
ORIGIN      
        1 gcactctagg taaaagagtg ctaatttttt gtctttttct cttgacaatc cattttttcg
       61 gcgtataatg agagtataaa gtttagcact cgatatgtca gagtgctaaa gttaaaaatc
      121 aatcgtgttc atgaaaggag cggagatgat tacccaacgt caaaatgata ttttgaatct
      181 gattgttgaa ttgtttacgc gccatcatga gccagttggt tctaaggcct tgcaggagat
      241 gattgcttca agttcggcta ccattcgtaa tgatatggct aagctggagc agttgggcct
      301 gctggaaaag gcccacacgt caagtggtcg gatgcccagt cgggctggtt ttcaatactt
      361 tgtcaaccac tcgctcaatc tggaacatat cgatgaagaa gatgtttatc aagtggttaa
      421 ggccttcgac tttgaagcct tcaagctgga ggacatcttg gagcgggcaa gtcaggtcct
      481 agcggatttg acaggctaca cttcggtcat cttagacgtg gagccgacca gtcagcagct
      541 gacttccttt gacattgtgc agctcagtag ccacgatgct ctggcagtct tgactctgga
      601 ccagtccaaa cctgtcactg ttcagtttgc tattcctaag aacttcttga ctagggattt
      661 ggaagtgctc aaacgcttag ttgatgagcg cttcgttggg cagacggtct tggcaatcca
      721 ctacaagttg cggacggaga ttcctcaggt ggtgcagcgt tactttacca cgacggacaa
      781 tgtcttggat ctcatggatt acatcttttc caatctcttc caagaatcgg tctttattag
      841 tggaaaagtt gcctcgctga cttacggtaa tctagctacc taccaactct tggatagtcc
      901 tcagttattg gcaccagagt tgcggcaggg cttggctcca gaccagcaga ccagcatttc
      961 cgtggcggaa cattctgatc cagccctagc ggatgtgacg gtcattcatc atcgctttcc
     1021 aatcccctat cggggtatgg gccagatgag tttgcttggt cctgttgaca tgaactaccg
     1081 caggcagatg agtttgatca acatcatcag ccgcgtccta tttatgaaat taaccgatta
     1141 ctaccgttat ctaagtagta atcattacga agtcaattag aaggagaatg ctttgtcaga
     1201 agaaatcaaa aatgaagaaa tcgtagaagg ggttgaggca acagaagaag ttgtggagac
     1261 acctgaaaaa tcggaattgg atttggcaaa tgagcgtgca gaggaatttg aaaacaagta
     1321 cctccgtgcc cacgctgaaa tgcaaaatat ccaacgccgt gctaatgaag aacgccaaac
     1381 cattcagcgt taccgttcgc aagacttggc caagaaaatc ttgccaagct tggataactt
     1441 ggagcgtgcc cttcaagtcg aaggcttgac agaagatgtc aaaaaaggct tggaaatggt
     1501 acaggaaagc ttgattcaag ccctcaaaga agaaggggtg gaggaagtcg caaccgatgt
     1561 ctttgaccca aatcttcaca tggctattca aacagttcca gccacagacg actgcccagc
     1621 agaacacatc gcacaagtct tccaaaaagg ctacaagtta catgaacgct tgctgagacc
     1681 ggctatggta gtggtgtcag aatagtcgct ctgctatttt ccaaaaaaga aaacttgacc
     1741 gaaatgtcgt gcacagtagt ttgcaaccaa tcgcttcgtc gcgaggctcc tagctcttgg
     1801 gcaaactttg tgtcggtaac tctaaggtcg ctaaagcgac aagagttact cgaaaactat
     1861 gaaaaaacct cgtctgcaat gacggtaaac tatgaatgaa taaaagaaaa ctaaaataag
     1921 aggtaacaca catgtctaaa attatcggta ttgacttagg tacaacaaac tcagcagttg
     1981 cagttcttga aggaactgaa gcaaaaatca tcgcaaaccc agaaggaaac cgcacaactc
     2041 cgtctgttgt gtctttcaaa aatggtgaaa tcattgttgg tgacgccgct aaacgccaag
     2101 cggtaaccaa cccagacacc atcatctcta tcaaatcaaa aatgggaact tctgaaaaag
     2161 tttcagcaaa tggcaaagaa tacacgccgc aagaaatctc agcaatgatc cttcaatact
     2221 tgaaaggcta cgctgaagag taccttggtg aaaaagtaac caaagccgtt atcactgttc
     2281 ctgcttactt caacgatgct caacgtcaag caaccaaaga cgctggtaaa atcgcaggtc
     2341 ttgaagtaga acgtatcgtc aacgaaccaa ctgcagcagc ccttgcttat ggtttggata
     2401 agactgacaa agatgaaaaa atcttggtat tcgaccttgg tggcggtaca ttcgacgtat
     2461 ctatccttga acttggtgac ggtgtctttg acgtacttgc tacagcgggt gacaacaagc
     2521 tcggtggtga cgactttgac caaaagatta tcgaccacat ggtagcagaa ttcaagaaag
     2581 aaaacggtat cgatttgtca gctgacaaga tggcccttca acgtttgaaa gatgcagctg
     2641 aaaaagctaa gaaagacttg tcaggcgtga cttcaactca aatcagcttg ccgttcatca
     2701 ctgcaggtgc agcaggtccg cttcacttgg aaatgacatt gactcgtgcg aaatttgacg
     2761 aattgactta cgaccttgta gaacgtacaa aaattcctgt tcgtcaagct ctttcagatg
     2821 caggtctcag cttgtcagaa attgacgaag ttatcctcgt cggtggttca actcgtattc
     2881 cagcagttgt agaagctgtt aaggctgaaa ctggtaaaga gccaaacaaa tctgtaaacc
     2941 ctgatgaagt tgttgctatg ggtgcggcaa tccaaggtgg tgtcatcact ggtgatgtca
     3001 aagatgttgt tcttcttgac gtaacaccat tgtcactcgg tatcgaaaca atgggtggtg
     3061 tatttacaaa gctcatcgac cgtaacacaa ctatcccaac ttctaaatca caagtcttct
     3121 caactgcagc ggacaaccag ccagctgttg acatccacgt gcttcaaggt gagcgtccaa
     3181 tggcagcaga caacaagact cttggtcgtt tccaattgac tgacattcct gcagcacctc
     3241 gtggtattcc acaaatcgaa gtaacattcg acatcgacaa gaacggtatc gtttctgtaa
     3301 aagctaaaga ccttggtacg caaaaagagc aaactatcgt tatccaatca aactcaggtt
     3361 tgacagatga agaaatcgac cgcatgatga aagatgcaga agcaaacgct gaagcagata
     3421 agaaacgtaa ggaagaagtg gaccttcgta acgatgttga ccaagccatc tttgcgactg
     3481 agaaaacgct taaagaaact gaaggcaaag gcttcgacgc agaacgtgac caagcccaag
     3541 cagcccttga tgagttgaaa gcagcccaag aagcgaacaa cttggatgac atgaaggcta
     3601 aacttgaaaa cctcaacgaa aaagcccaag cccttgcggt gaaactctac gagcaagctg
     3661 cagcagcaca acaagcagct gcaggccaag aaggtgccca aacagctaac aacgcaggcg
     3721 atgatgtggt ggatggcgag tttactgaaa agtagtaaaa acgttcgggg aacgttttta
     3781 gcctgcgagc cagaaatgag aaacgagcag ttggtcctgt ggactatttt agcccgtgag
     3841 ccagaaatga gaaacgagcg gttggactgg gagacctttt tatcctgact tcttgaaaat
     3901 tagtaggaag tcggttaagg ttcttaactc gaacccagtt ctcaacttcc cgataataga
     3961 aatcattcgt caataaaatt tccaatcaca gaggttgcaa cccagcctct gtttttaggt
     4021 aaataccctt ctaactttta cagaattgaa tacgcctacg actctttgaa aaaagataaa
     4081 ctttacctag atgcgaggca tcgtcggaca gtttcctatt tttctttgag tcgcttaacg
     4141 gcttaatatc ttcatagaaa gaaaagtgtt cgtaactgaa cacgggctac tttctaattt
     4201 tcaaagaaag gaatacaagt tcgtttattc gaacacaggc taaaaaccta gtgaaaaaga
     4261 taaacttcct agtgtgtttt acacactgcg tcagtttcct attttcatac ggttttctta
     4321 acgccttttg tatcataaac tatgaacaac acagaatttt acgatcgtct ggggatttct
     4381 aaggatgctt ctcaggacga gattaagaag gcttatcgga agctttcaaa gaaataccat
     4441 ccagatatta ataaggatcc gggtgcggag gataaataca aggaagtcca agaggcttat
     4501 gagactctga gcgaccctca aaaacggtct gcctatgacc agtatggtcc tgctggtgcc
     4561 aatggaggct tcggcggagg agcaggtgga tttggtggtt tcgacggagc aggtttcggt
     4621 ggctttgaag acattttctc tagcttcttt ggtggaggtg gtgcgacgcg caatcctaat
     4681 gcacctcgtc aaggggatga cttgcaatat gcggtcaatt tgaaatttga agaagcgatt
     4741 tttggtgtgg aacgtgaagt ttcctataac cgtgaggcaa cttgtcgaac ctgtacaggt
     4801 tcaggtgcca aacctggaac aagtccagta acctgtgggc gttgtcatgg ttctggagtg
     4861 atcaatgtgg acacccaaac tccacttgga accatgcgtc gtcaaatgac ctgtgatgtc
     4921 tgtcatggtc gcggaaaaca aatcaaagac ccatgtacaa cctgtcatgg aactggtcat
     4981 gaaaaacaag cccatacggt aacagtcaag gtgccagctg gtgtggaaac tggtcaacgt
     5041 attcgcttgg caggtcaagg tgaagcaggt ttcaatggag gtccatacgg agatctctac
     5101 gttgtcattc aggtccaacc ttcagacaag tttgaacgtg aaggaaccac tattcactat
     5161 aaactgaacc tcaactttgt ccaagccgca cttggagata cagttcatgt gccaacggtt
     5221 cacggtgatg tggatatggt cattcctgaa ggtacccaga ctggtaagac cttccgactc
     5281 aaaggaaaag gtgcaccaag tgttcgtggt ggagtcatcg gtgaccaata tgtgacggta
     5341 aatatcgtca ctccgacagg tttgaatgac cgccaaaaag cagctcttaa agaattcgcg
     5401 gcagcaggaa atattgatgt caaaccccat aaaaaaggat tttttgacaa ggtaaaagat
     5461 gcttttgatg agctgtaaat tgcttttatc ggcatactca aaatcagtaa gcgtggcttg
     5521 ctgatttttt actttcatga taagctaata aaaaatacaa ggagatgtct atgtggaaag
     5581 atgcgacgga aatggccttg gctgttcgaa caggtcaggt ttctgctaaa gaattggtag
     5641 cggacgctat tgaacgaata gaagaggaaa atcctgctct caatgctgtc gtcagcaagc
     5701 aatatgagca agccctgcaa gaagcagaaa caggggactt tcaagataag ccctttggtg
     5761 gtgttcctct tttgttgaaa gatttggggc aaaatgaaga agggcacttg tcaacagcgg
     5821 gctctcgtct attccagaat taccgagcgg ggcatacaga taaattggta caggctttca
     5881 aggatatggg tttcatcatc ttgggccgga ccaatacgcc agagtttggt tttaagaaca
     5941 tatctgactc cagcctacat gggccagtca agttgccgct agatttgagc cgaaatgcag
     6001 gtgggtccag tggtggtgca gcagcggcag tagcttctgg tatggtacct ttggcagcag
     6061 cttcagatgg tggcggttct atccgtattc ccgcctcctt caatggtttg attgggctca
     6121 agcccagtcg gggtcggatt ccagttggac caatttctta tcgaggttgg cagggcgctt
     6181 ccagcaactt tgctctgact aagtcagtcc gcgataccaa acaccttctt tatcacttgc
     6241 agacctatca ggtggaagct ccctttcctc tggctctcct gtctgagcag agtctccttg
     6301 caccgcaaga taaacctctg aaaattgcct acagtctgga atcgccgatt ggcagttcgg
     6361 tttctgctga tgccaaacag gctgtcttgt cccttctgcc tcagttagaa gcactggggc
     6421 accagattac cgagctagca agtcctattt tagacggcct tgaagtcatg caggcctatt
     6481 acctgatgaa cagtgttgaa acagctcaga tgtttgacga gattgaagcg gggctgggtc
     6541 gtcccatgac ccctgatgac atggagatca tgacctgggc catttaccag agcgggcaga
     6601 ccatcccagc taaactctat tctaaggtct tacaggattg ggaccgctac agtgccatca
     6661 tggcggactt ccaccagcac tacgatctcc ttctgacacc gaccgtcgca gatgtagcgc
     6721 caaagctaaa ccagttcact cactcgcaag agatgctgga ccgcttgttg cacatgcagg
     6781 agttggcaat ggcagagcag cagagtttga tttgggagat gtttgcagat agtctggcct
     6841 ggacaccctt tacccagcag gtaaacatca ccggccaacc ggctattagt ttgccaactt
     6901 ataagacccc gcaaggcctg ccaatcggcg ttcaattcac agcagccaaa ggtcgagaag
     6961 acttgttact ccatgtggca gaccagttgg aacaggcgag gcttcttcat ttataatttc
     7021 tctatttttc agttcaatta tttgccaaaa cgttttcaaa atgttaacct gtaaaagttg
     7081 gtgggttaac accgaaaaag taaaaaggaa gctatagctt ccaaaggaga ttgttttatg
     7141 ttgaaaaaag ttttggcctc agctctcttg gtttctacat tgaccttggc agcatgttct
     7201 agctcaagtt cgaatactag cagttcttct gctgaacaga ctcaatggga aaaaattcaa
     7261 gaagctggtg tcttgaaagt tgctacacca ggtaccctct tcccaacttc ttactacaac
     7321 gatgctaaag aattggtcgg ttatgaaatt gacatgatca atgaaattgg taaacgtttg
     7381 aaattggaaa tcgaatacca agaaatcgga gtggcagaag cctttacagc tgtggacagt
     7441 ggtaaagttg atatttctgt taacaacttt gacatgacag aagcacgtaa ggaaaagtac
     7501 aacttctcta ttccttacaa gtattcagtt ggtggctaca tcgtccgtga agatggttca
     7561 tcaggaatcg aagcagctga cctgagcgac tggactgata aaaaagcagg tggtggcgca
     7621 ggtactcagt acatgaaaat tgctgaaaag caaggcgcag agccagttat ctatgacaac
     7681 gtaaccaatg atgtttactt gcgtgatgtt tcaacaggcc gtacagactt cattccaaac
     7741 gactactaca cacaagtcat ggccatcaaa tgggcaaatg ccaacttccc agatatcaaa
     7801 gtgaagatgg gtgatgcaaa atacaaccca acagaacaag gtattgtcat gagcaaggct
     7861 gacacaagct tgaaagaaaa aattgacgaa gctcttgaag cgatgaaagc tgacggaact
     7921 ttgaaggcaa tttctgagaa atactatgca ggacaagatt tgacagttcc tgttgaaaat
     7981 gcagatgagt tgccagttat cgaagttgaa taagacctcg taacaaatta aatgcatctt
     8041 gtatagactt tgtcagtcac agactggcaa ggtctatctg gtttttagga aagaggagaa
     8101 gatatggata ttaactggca ggcagttttt aatgcagata ttgcaagaga ggctattcca
     8161 cagattttgg agggacttcc ctacactcta tccctatccc taattggttt tgccttgggg
     8221 actttctgtg gattttttgt agccctcatg cggatgtcta agtttggacc cttgcgttgg
     8281 ttggctatgg cccatatttc tctcatgcgt ggaattcccc tcatggttct tcttttcttc
     8341 atttattttg gtttgccgtt tatggggcta caactagatg ccatctctgc atctattatc
     8401 gcctttacct ccatgtctag tgcctacatt tctgaaatta ttcgtgcatc tctttcggcc
     8461 attgataagg gacaatggga ggcggcgcgt tccctgggct tgcggaccaa tgtgatttac
     8521 agaaaaatca ttattcccca agcctttcgg attgcccttc caccgctgag caatgtcctc
     8581 ttagacatgg tcaaaagtac ctctctgaca gccatgatta cggtaccaga gattttcaac
     8641 aaggccaaga tagtcggcgg agccaagtct gattacatga cagtttatat ctgtgtagcc
     8701 ctcatttatt gggttgtctg tacactttat gcatttggtc agctcaagct agaaaaacgc
     8761 ttggcgacgt attaaaaaaa atcctcggtt cttttgaatc gaggaatttt tgctagtctg
     8821 gatagaagac aagaatagca gaagtggaag aggatttggt gtattcaaaa tcctccagat
     8881 cttgaacgga taagctttga acagtgaagt aagtttgttt tttatagcga atattaaaat
     8941 cattgctact accagcatcg atagttgaga aactatgttc gtttagagta aactcttctt
     9001 ttgagagttt ctcgagattt tcttttgttg ccattaaata gattttgcca gagaaaggag
     9061 attcaagaga gaattctcct ttggatgtcg tgatttcgac aatttgctga aagttctcaa
     9121 tcttagccag actttcgtct gtttttagag ctttttctgt ttcgatggga gctgctgtta
     9181 gctcgttttg tatttcttta ttcacttctg aagtgacaga gtgacaagca cttaagcaag
     9241 ggatcatcat gcagagtgca aagagggaaa tatacttttt catcatgggc tcctttatat
     9301 aatttcatca ttttcagctt gtaaaagcac acctttttcc aacaccatct ttgctagtag
     9361 tgcaataata atcagcacac catttatgaa gtagtcacta agtgaaaaat catataaatc
     9421 acttacattc tttaaatcta ggtaagatag gaaaaaagca cttgcaaatt gtatgctagt
     9481 ccatatgatt aaggttccta aaattatctt tgtatagact acattttcag ttgagaaaat
     9541 agttcctgtt tgaaagttga tgagcaattt tttgagtatg gtggccatgt agataaagca
     9601 ggctaccaat aggatactta tgattagaat aagaacaatg ataggcaagg ggacatctaa
     9661 tcgtagacta ttttgaatag gtttcccgcc tataagtaga ataagaagtg ccaacattat
     9721 cagtcccgtt aaggcaatca atccataacg aataaacgtt agcaactgta tgacgatgtt
     9781 gaaaaagatc tttttgttca tgctatttcc cctccctcac atattccaaa atatctcctg
     9841 gttggcagtc taggatgcgg cagatgctca tcaaggtatt gaagcgaatg cctttggcct
     9901 tacctgtttt gagaatggac aggttggcct ctgtaatgcc gacttgttct gccaagtctt
     9961 tagaggtcat ttgacgatct ttgagaatct tatctaagtt tacgcgaatc atgtccatat
    10021 cagataaact cactgttctc agttgctaat tgtcgccctt tttgaaccaa tctccagaca
    10081 aaataagtca ggaagataaa gagagcattg aggataaagt ctgaccagcg aagattgagg
    10141 aaggtgtttg gaacagtatc atgtgtcagg aaaaacaaag tggttaggca aaattgacca
    10201 gcagtcaaga cgagcaaact gatgaagagt ttctgataaa gttccagact agctgaagcg
    10261 aaataatctt cttccagaag caatttacat aacttttgaa gcaagtgggc aatgtgactg
    10321 agtgctacta agacaactag aatcaatcca gttgttaaaa ggatgatcca gacactgatc
    10381 tggtcaatgg gtttgttaaa ggtgtattcc caagagtcta tcacaaagga gtggcctcca
    10441 agacctacca aggtaatgaa ggcatagaga gcaatcatga aatagaagaa atagcgaaca
    10501 caagcagcca caatgccagt tattttgagt agattggttt tcatagcaaa cctccgatta
    10561 ttattgtttt atgataatat tatctttaaa attattataa aacaataatt tctgaaatgc
    10621 aagcgttttt ttaaaaaaga ataataagaa aaccgccaac tacctggcgg ctttctgcta
    10681 tttaaaatac aagagtctca gtccgttgag aatgaccaaa atcgttgatc cttcgtggcc
    10741 caccacaccg agtgggaggt tgatagactg gaagaggttg gagatgataa gaagggcaat
    10801 gacagatagg gcaaagacga tattttgctt gatgatgccc cgcattttct tagatagacg
    10861 gatggagtaa ggaatccgtg tcagatcttc catgagtacg atgtcggctg actccatagc
    10921 gatgtccgtt ccgcttccca tagcatagct gacattggct tgggcaaggg caggagcgtc
    10981 gttgataccg tcgcccacca taccgacaga cgcaaactcg gtttgcagtt cttggataat
    11041 agtagccttg tccgtcggca agcagttggc aatgacccgc tcgataccga cctgactcgc
    11101 cacgtaatga gcagtctttt cttggtcgcc cgtcaggaga attggcgtca ctcccatttc
    11161 tttcaactgg gcaataagct gcttgctctc aggcttcaaa ctatcttcca ccatgaagat
    11221 cgccacaagg acatcatttt gactaacata gaccagggtt tttccagtgc tttctgcctc
    11281 atcaatctgt gcaactaagt ccacagacag cggacggacc aagctatcca ccacaaagcc
    11341 tgccttaccg attttccagc tgtcgccctg atagcctgcc accaagccgt ttccggtcac
    11401 gtcttctagg ctttggaggg caatagcaga gctgtcagcc gtataggtca tgagagcctg
    11461 agcgattggg tgactcgatt gtttttcaac tgcctgaaca acctgcttga taagctcttc
    11521 atcgccaaga tagcatgccc ctacaacctc aggtttacca atggttaggg tacccgtctt
    11581 gtcaaagacg atggcttcta gattggcgat gttatccgca atatcaccgc ccttgataat
    11641 catgcccttg cgtgccgcac ggctgatggc agaaagtgtt gcgggtgaag aagaagctac
    11701 gagggcacaa ggagaagcga tggtcaagag aatcatgcca cggtagaagg cagttaacca
    11761 gtcccagccc agtgcaaaat gggcaaagag aatgaagagc ggtactacca ccaaaacaac
    11821 cttgacatag gtatcttcca tattttcaat gaaagtcgct gtttgtgatt tagattcttg
    11881 ggcgttttca accatttgga cgattttatc gaatagggca tcgccttttt cagctgtaac
    11941 ttgaacggtc acagttggac cttggttaat ggttccgccg ataacagcag cgccagccat
    12001 tttctccgca gggagcggct cgcctgtaat catggattcg tcaaagatgg attgcggact
    12061 gatgagggtg gcgtccagtg ggaccgtgtc acccttgcgg acttgcaaga ggtcgccgat
    12121 gcggatggct acggtgtcta agacagtaat gtcaccattt tcctcgattt tgcgagccgt
    12181 tggaggcgtc atgttcatca gagctgcgat agcattttta cttttctcca tggctaattc
    12241 ttccaatgta gaagacaggg agaagatgaa gatgagtaga gccccttcca tccagtagcc
    12301 aatcagacca gagccgatag ctgccaaaat catgaggagg tcaaccgaca ggtgcttgtc
    12361 gaaaatcagc tcagaaatgc cttccttggc tgactggtag cccccgatga caaaggctga
    12421 aatgaagagg atgggtgtgg ctccctgatt agtttgaagt aagaaaatcc cgatgaggat
    12481 caacaacaga cagaggctgg ttgttacgat gtgaagatgg ttttttaggt tgtttacaag
    12541 agtcatagtt agttccttat ttataatcat tatcgtttcg ataagttaat tataacagtt
    12601 ctaaatagaa aatcaagagt tttttagaat aattataaat aagatttgtc agacaattca
    12661 aagagaaaag aaaaaagcaa ccagtggctg ctttctagct attgagttga cagtcggggc
    12721 agataccata cacagacaag acttccttgg taatcttata acctgtttgt tcgtgggctt
    12781 cgcgtttgag gctagggatt tcgacatcca tgaaatcagt gatttttcca cagacttcac
    12841 aaataacatt gaggtgttcg tgccccataa agtcgtaata agtagtatta tcattggtcc
    12901 gtttcaattc ggtcacgaac ccttcttcca atagaagttt gaggttgtta tagacagttg
    12961 ccaaactcat gttaggatag ttgggcagga ggtctttgta tatcatttca gcacttggat
    13021 gatcgtcgct atcaatgata taggctacaa cagccttacg tgtttctgta atgcgaacac
    13081 ctttttcctt taagtgttga ataacatgct caaaggcagt ttggttttct gcgttaaggt
    13141 gagagtgtag ttccattcgt gcctcctgtt cttttcaaga ataattctaa tttacttttc
    13201 ttcattataa tcctttttat gaaagctgtc aaacttagaa ggggtccatc tgtgctagta
    13261 cagtttttgt tttataggct tgtatttgca agtttgcttg tgctacaatc agaacatgac
    13321 acgatataag gcaattattt cctacgacgg acatgacttt tctggtttcc aacgccagcc
    13381 ccatgcccgt acagttcagg aagaaatcga aaaaacgtta gtaagattga atagtggcca
    13441 gcctgtaacc gttcatggtg caggtcgtac agacgcagga gtgcacgctt atggtcaggt
    13501 gattcacttt gacttggctg gcagtcgaga tgctgagaag ctccgctttg ccctagatac
    13561 tcaaacccct gaggatattg atgtggtcag tgtggagcag gtggcggatg attttcattg
    13621 ccgctatgct aagcacagca agacctacga gtttctggtg gatattgggc ggcctaagaa
    13681 tcccatgatg cgccactatg cgaccttcta tccctatgat ttggatttga gcttgataga
    13741 agaagctatt caggacttgg tggggaccca tgattttaca ggctttacgg cttcagggac
    13801 ctcggttgaa gacaaggtgc ggaccattac ggcggcgact atggaatacg accagcggcg
    13861 gcagttcttg atttttacct tttcaggcaa tggttttttg tacaagcagg tgcgcaatat
    13921 ggtcgggacc ttactgaaaa ttggcaatgg tcgcatgcct gtgggacaga ttaagcggat
    13981 tttggcagaa aaagatcgtg gtttggcagg tccaactgcg gcaggcaacg gcctctatct
    14041 aaaggagatt atttatgaag actaagtata ttttggcgct ttcgggcaac gatattttca
    14101 gcggtggcgg tctccatgcg gatctgacga cctacgctgt ccacaagctg catgggtttg
    14161 tggcggtgac ctgcttgaca gctatgacgg aaaaaggttt tgaggtcatt ccgacggatg
    14221 cggcggtgtt tgcccagcaa ctggctagtt tgaaggatgt acccttttct gcgattaaga
    14281 ttggcttgct tcccacggtg gaaatagcag agcaggcttt ggcgtttgtc aaggctcacc
    14341 aggagattcc tgtggtcttg gacccagtct tggtctgcaa ggaaacgcat gatactgagg
    14401 tcagccagtt gcgagatgaa ctcttgaaat tccttcccta tgtcagcatg atcacgccaa
    14461 atctggcaga agctcagcta ttgctccaaa aagacatcaa aacggtggag gagatgaagc
    14521 aggcggcagt ggccttgtat gactttggtg ccaaggcggt ggtcatcaag ggcggcaatc
    14581 gtctgggtgg cccagaggcg gtcgatgttt tctacgatgg tcaggaaatc gtggtgctcc
    14641 agtcgcctct gttgtcagaa aacaacgtgg gggcgggctg tacctttgcg tccagcattg
    14701 ccagtcagct tttgctgggt caagagcctt tggaggcggt cagactgtcc aaggactttg
    14761 tccatgcggc gattgaaaaa tcagatgatt atggggtgat tcaatatgag aaataaaaaa
    14821 acgcaggaat tggtcttgct cgctatttta acagccttga gtttagtttt ggcctttatt
    14881 catgtgccaa caccgacggg attttttact ttgttggatg tgggtgtctt ctttaccgcc
    14941 ttttacttgg gcaagaaaga gggagcgatt gtcggcggtt tggcagggct attgattgac
    15001 ttcttgttgg gctatcccca ttgggcattc tttagtctag tattccacgg ggctcaaggt
    15061 tactttgcgg gttggacagg taagaaacgg attctcggtt tagtcttggc gacgctctct
    15121 atggttgggg gctattttgt ggcatctagt ttcatgtata atgtagctga cgctgttaca
    15181 agtctgatga gtaatactct gcaaaacaca gttggtttgg tagttggtta cgtcttggct
    15241 caggcaatag aaagaattgg tgcagtaaat catgtcatta aaggaaatta aggaacagac
    15301 ccagcaagtt gtgcaagaag tcctagaact cagcaatctt caaaaggggc agatatttgt
    15361 tctaggtttg tcttctagtg aggtcattgg tgggcatatt ggcaaaaatt ctagtttgga
    15421 agttggtgag gtggttgttg aaaccatctt ggaaatcctg gagctaaaag gtatttatct
    15481 agctgtccaa ggttgtgaac acctcaatcg tgccttggtg gtggagcgtg aattagcaat
    15541 tcagaaggac ttggaaatag tcaatgtcct cccaactctt catgcaggtg gttctggtca
    15601 gttggcggcc ttcaagtata tgaaggaccc ggtggaagtc gagtttatca ccgctcaggc
    15661 tggtgtagat atcggcgaca cagctatcgg catgcacatc aagcacgtcc aagttccgat
    15721 tagacctagc ctgcgtgaaa ttggacaggc ccatgtcaca gctctcgcca gccgaccaaa
    15781 actaatcggc ggagtccgag cagcctatca ggaagataag atacggaaag gttcataatg
    15841 aaagaattta cggttaagga tttagtgtgg acccgtccac cgagacaatt cactatttca
    15901 gatgaagaaa ttaccattac cacccacccc cagacggatt tgtggcagaa gacctattac
    15961 cattttgtga atgacaatgc tcccgtcttg caaatggaaa cggaggagga ctatttttcc
    16021 tttactgtga agacggattt tgcgggtagt catactcgat ttgaccagtg tggaattgtc
    16081 ctttatcaag attcggagaa ttggctaaag tgttcgatag aatatgaaaa tgatgacttc
    16141 caacacttgg gaagtgtggt gaccaatcac ggcttttctg actgggcaac taccgcaatc
    16201 agttcacaaa tcaaatccat gtggtttagg ctcagtcgca ggggagctga ttactgtttt
    16261 gaaaattccg aagatggtat ccacttcaaa caaatgcggg tttgccattt tcatcaaggg
    16321 acggggaaaa tagcttttgg gctatatgcc tgttcaccag aaaactccag ttttacagct
    16381 cgctttacca atatggaatt gagcgactgc aaatggcagg cccatgacgg acaagagcca
    16441 gatgaaatat agtgagagtc ttaggtaagt agtgacagaa aaatagttga aactcagact
    16501 cttctaaaat caaaatgatc cgtagtcaac tcgccttgaa gaactcctgt tcaatcttcg
    16561 ccttcgtttc ctaggctact tttgattttc attgagtatc aggaagtaac tttcgactag
    16621 taagagagtt actttttttt atcttttgag ccaaatcctt gcccaaaagt ctggcttttg
    16681 ataaacttgt tcctgtaaat gatacaagaa cagaaaggaa accagatgga tacaaagttt
    16741 tcagtagccc ttcatatact gaccatgatc agtgagagca aggaaatact tagctcgcaa
    16801 gccttagctg agagcgttgg caccaatgcc agctacatcc gcaaggtgat tgcacttttg
    16861 aaaaatgcag gcttaatcac ttcgcaccaa ggccgttcag gctaccaatt gagcaagtcc
    16921 cctaaggaca ttagcttatt ggaaatctac cttgcgacgc aagaagtgga gcatattcgt
    16981 ctatttcaga ttcaccagaa tgccaatctt acttgtccgg ttggacagca tatagaaggt
    17041 gcaatggttc ccatcttttc cagcgttgaa caagaactgg aaaatcaact cagtcgtcaa
    17101 tccttagata atgtgattac taatctctat caatctgcac aagcaacccg aatctgacct
    17161 cggtcagatt ttataaaccc aaacatagac ctgtaagtga tacaggaaca aataaaagaa
    17221 tagaaaagag aagaacatga aagcagcaca acacacatct tataacaaaa acaacatcac
    17281 ccttaacctt acagaaattg ctaaaccaca aatcaaacct aaccaagtcc ttgtcaaagt
    17341 gaccgcagca ggcgttaacc cattggacaa tatgatttca cgcggagatg tgaaattgat
    17401 tgttccttac aaattgccac aaacggctgg aaatgaacta gttggcttga ttgaagaagt
    17461 cggtgcaact gtaaccaact ttgcagcagg tgatcgtgtc ttcggtcgtc ttccgcttga
    17521 tagtatcggt gcttttgctg agtatgtagc agttgatgca caagctcttg ctaaggttcc
    17581 tgcctacctg acagatgaag aagcagctgc cgttcctctg acagccttga ccattatgca
    17641 ggcacttgac ctcataggtg cgcaagcagg caagaccatc ttcatctcag gcggaactgg
    17701 tggtgtaggc ggtatggcta ttccaattgc caaagccaag ggcttgaccg tcattactaa
    17761 tggtgatgca gcaagtgcag agcgggtgtt gtcattgggt gcagaccagt ttatcgatta
    17821 caagacagaa gattacacaa aaacacttaa caatgttgac tatgtcttgg acacacttgg
    17881 tggtgcagaa acagagaaac aaatgacaat catgaaaaaa ggtggacagc tggtttccct
    17941 tcgtgccatg ccaaatggag aatttgccaa acgcatgaat ttgccaaaat ggaaacaaat
    18001 cttgtttggt ctagctggtc gttcatttga caaaatggca aaaaaatacg gtgttcacta
    18061 ccatttcatt ttcgtagaga gcaatggtcg ccaattgcaa gaagtagcag acattttcag
    18121 caagctcgaa atcaaaccat ctatcgatac cgtttatcca tttgaagaag tcaacgcagc
    18181 acttgataag gttgccaacg gtcgttcacg cggaaaaact gtcctcagtt tcaactaaaa
    18241 aataaaatat acagggaaaa atcatgtcat atattacaac caaaaaccaa tacatcaccg
    18301 tttcaaataa taaaatcgcc tatcgtgagc tcagcaaggg caagtcagac cttcctttgg
    18361 tcatgctggt tcacctagcc gcgaccttgg acaactggga tccaaaattg ctggatttgc
    18421 tggctgaaaa gcaccatgtg attgtcctag accttcctgg cgtgggagct agtcaaggca
    18481 aggtggctcc gactattcca ggaatggctg agcaggctgt ttctattatc aaggctttgg
    18541 gtcatgagaa aatcaatttg ctaggtctat ctatgggtgg ttttattgct caagaaatcg
    18601 ttcgtctgga tagtcagctg gtcaaccgtt tgattttagc aggtacaggt cctcgtggtg
    18661 gttttgaagt tgataaggtg actggaaaaa ccttccgcta tatgctgaag gctggtttgg
    18721 agcgtgtgga tccaaaacgc tacatcttct acaatcatga tgaagcaggt cgtttggagg
    18781 cagaaaaagt cttgggtcgt atggggcaaa gaagtgctgc tcatgcagac aaggacatga
    18841 atgttccagg atttttgacc cagctgaaag ctatcaaacg ctggggaaga gagccgcaag
    18901 atgacatgac ctttatcacc caaccaactc tgatcgtcaa cggtgataag gacatgcagg
    18961 ttccaacaga aaattcttat actatgcatg agaagatcaa aaatagccaa ttgatcatct
    19021 atccaaatgc aggccacggc tcgatcttcc aaaatgcaga agagttttca aaaaccttac
    19081 tagccttttt ggaggaaagc aatgcctaaa accattttaa tcactggttc gacggatgga
    19141 atcggcaaac acctagccat gaaattggcg agtgaaggtc atgaagtcat cttgcacggg
    19201 cgaaatagcg aaaagctccg tgtagccctc agtgatattc tacgataaat gaacctacca
    19261 acaattttcg gaaaaagttg taacaaaacc cttgacaact tttgggagtt aggatatact
    19321 agtctacgta aagttgtaat aaagaaattt acaacaaaaa catttcggag gaaaagaaaa
    19381 tgaaaatagc agtagtagca gcgaacggta aagcaggtag cttgattgta aaagaagcgg
    19441 cagcacgtgg ttttgaagta acggctatcg ttcgtagtga aaataagaca gtcgcacagc
    19501 aggttcttca aaaggatgtt tttgacttga cagctgatga tgtgattcgt tttgatgcgg
    19561 tagtggatgc agtaggtgcc tggacagcag acactgtgca tatggttcct gatgcagcca
    19621 aacatttggc ggctattcta aaagattcac aaacacgctt gcttgtggtt ggtggagcag
    19681 caagcctcta tgttaatcca gaacatacct tgactgtggc agatgtgaca gagtttccag
    19741 cggaagtatt gcctgtgcta aatgctcaca aggaagcact tgaggccctt cgtcaagtag
    19801 atgatgtcaa ctggacctat gtaagtccgg caggtgattt ccaagcagac ggcgaacgga
    19861 caggtcgcta tattcttggc ggtgaagagt tggtcttgaa cagcaaggga gaaagcgtta
    19921 tttcctatgc agattatgct attggtatga ttgacgagat tgcatcaggt aatcatctca
    19981 aagcacgtat cagccttgtc agtgagtaga agagttctat gcagatctca aataaattta
    20041 ccattgccat tcatgccttg gcttttatcc atctctttca agatcagcag cgtgttacca
    20101 gcaaggtttt ggcgaacagc attcaagcca atcctgttat cattcgctcg gttctatctg
    20161 gtttgaagga tgcgggaatt gtagacgcta agcagggtag cggcggtttt cgtttagcaa
    20221 agccacttga tgacattagc ctttatgaca tctttgttac ggttgacaat atcgataaga
    20281 aaggcttgtt taattttcat gaaaatcccc atcccgactg tatcgtaggg gggaatatcc
    20341 atgctgctgt ggacgacaaa ctcgtccaag tccagacagc tatggagaaa gaattgaaaa
    20401 ctatgtatat gtctgatgtc ctggttgacc tagaaaaagc cattgaagaa aaagcgaaaa
    20461 ggacttaaat gggagtggga aagaactcga ccattcat
//
LOCUS       DASFQS010000036        20004 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.036, whole genome shotgun sequence.
ACCESSION   DASFQS010000036 DASFQS010000000
VERSION     DASFQS010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20004
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.036"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..776)
                     /locus_tag="U1041_001072"
     CDS             complement(<1..776)
                     /locus_tag="U1041_001072"
                     /inference="COORDINATES: protein motif:HMM:NF016529.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4768186.1"
                     /translation="MKQNSGQTVHRFSLRKTSFGLVSATIASLFMLFSFSSERQVFAE
                     DSAKTVHYRYIAEDELTASEKQLIVNELPKLVEESDNAYYLIYKPKQSVSEGILPATG
                     DEWFGQVTGALVGAGLLILAIRKGRKGKKEFAGLFILGATGSLLLAPPAFSLTNQTLA
                     RFNQELSISVGEQLPEPMAIEGYRYIGYIKESKSDEIVKPIHPNSYLPGTDNAVNPDK
                     PSLAVEHVDSVQTEPVAYDTLEFPNNELLAGETVVSQEGV"
     gene            complement(1555..2340)
                     /locus_tag="U1041_001073"
     CDS             complement(1555..2340)
                     /locus_tag="U1041_001073"
                     /inference="COORDINATES: protein motif:HMM:NF017946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4768187.1"
                     /translation="MTRYFYLYIHFMKLQWKRYIQYRKDAVIGIIGYSVNTVISIYIL
                     KVFLDNLSNFPGWSTNELVLLFGFVTMARAGWNFIFINTLFIGDYVREGTFDVLLLRP
                     VNTLLLIIFSKIDFESIGEFCIGLIIFWMALLTEFETLSAWFILKIILLLIGSILCYA
                     AIHLFVNSLTFFIKDVYSINFIVWRLDETTRYPNSIYPGWLSKLLWFIPYAFIGYFPL
                     MSITKSLPFLADLGTISAGYIIFLLVYKIVWKFSISRYHSYRQ"
     gene            complement(2343..3119)
                     /locus_tag="U1041_001074"
     CDS             complement(2343..3119)
                     /locus_tag="U1041_001074"
                     /inference="COORDINATES: protein motif:HMM:NF017946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4768188.1"
                     /translation="MNVLAYTIAEFRRRKSYRVSTILTILGAFLVVAIQISVWTSVVT
                     ENTSSQLVLYAVISRMMFILFPDHRTASIISEMIQKGDTAVYFLRPHSFMGMHFFRQV
                     GSFVYDLIFVVTPLTFALFFYSFVTGISLVPEMVLSFIMSALLGLLISFLFGYLLGLL
                     SIRFNQILGVLEFYDALLMLFGGSVLPISFFPEMLQKLIVLTPFYAMLSVPSSILSAL
                     LPAQYVLQQLCLQMFWVLLLVLFISMYQKKLFKVMNYYGG"
     gene            complement(3457..5004)
                     /gene="purH"
                     /locus_tag="U1041_001075"
     CDS             complement(3457..5004)
                     /gene="purH"
                     /locus_tag="U1041_001075"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006146083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEM4768189.1"
                     /translation="MTKRALISVSDKNGIVELAQELTKLGWEIISTGGTKVALDQAGV
                     TTIAIDDVTGFPEMMDGRVKTLHPKIHGGLLARRDMDSHLQAANDHEIALIDLVVVNL
                     YPFKETILRPDVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYPTVLGEIAEQ
                     GQTTYPTRQRLAAKVFRHTAAYDALIADYFTKQVGEDKPEKLTITYDLNQPMRYGENP
                     QQHADFYQNALPTAYSIAAAKQLNGKELSFNNIRDADAAIRIIRDFKDRPTVVALKHM
                     NPCGIGQAETIEQAWDYAYEADPVSIFGGIVVLNREVDAATAEKMHPIFLEIIIAPSY
                     SAEALAILTNKKKNLRILELAFDAQDASEVEKEFTGVVGGLLVQDQDVVVESPADWQV
                     VTERQPSEQEWAAMEFAWKSSKYVKSNGIIITNDKMTLGVGPGQTNRVASVRIAIEQA
                     KDRLDGAVLASDAFFPFADNVEEIAVAGIKAIIQPGGSVRDQDSIDMANKYGLTMVFT
                     GVRHFRH"
     gene            complement(5029..5187)
                     /locus_tag="U1041_001076"
     CDS             complement(5029..5187)
                     /locus_tag="U1041_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003032041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolecarboxamide
                     formyltransferase"
                     /protein_id="HEM4768190.1"
                     /translation="MIKKVISFILVFVLAALLFNSIIFVNLENPARLILAYGLSLILS
                     GFLMTQIK"
     gene            complement(5184..5741)
                     /gene="purN"
                     /locus_tag="U1041_001077"
     CDS             complement(5184..5741)
                     /gene="purN"
                     /locus_tag="U1041_001077"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEM4768191.1"
                     /translation="MKRIAVFASGNGSNFQVIAKQFEVVFVFSDCRNAYVLERAEKLG
                     VPTFTFELKEFSDKQAYEEALIQLLDQHQIDLVILAGYMKIVGPTLLAQYEGRIINIH
                     PAYLPEFPGAHGIEDAWQAGVSESGVTVHWVDSGIDTGQIIQQVRVPRLADDTLETFE
                     ARIHEAEYQLYPAVLEEFGAKRRVL"
     gene            complement(5738..6760)
                     /locus_tag="U1041_001078"
     CDS             complement(5738..6760)
                     /locus_tag="U1041_001078"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009729529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEM4768192.1"
                     /translation="MTNKNAYAQSGVDVEAGYEVVERIKKHVVRTERLGVMGALGGFG
                     GMFDLTKLDVKEPVLVSGTDGVGTKLMLAIQYDKHDTIGQDCVAMCVNDIIAAGAEPL
                     YFLDYIATGKNEPAKLEQVVAGVAEGCVQAGCGLIGGETAEMPGMYGEDDYDLAGFAV
                     GIAEKSQIIDGSKVQEGDILLGLASSGIHSNGYSLVRRVFADVSGDALLPELNGRALK
                     DVLLEPTRIYVQQVLPLVKAGLVNGIAHITGGGFIENVPRMFADNLAAEIEEDKIPVL
                     PIFTALEKYGNIKHEEMFEIFNMGIGMVLAVSPDKVDSVCQLVDEEVYTIGRIIAKED
                     KSVVIK"
     gene            complement(6816..8270)
                     /locus_tag="U1041_001079"
     CDS             complement(6816..8270)
                     /locus_tag="U1041_001079"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009908857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEM4768193.1"
                     /translation="MTYEVKSLNEECGVFGIWGHPQAAQVTYFGLHSLQHRGQEGAGI
                     LANDGGHLRRHRGTGLIAEVFKNPADLEVLKGNAAIGHVRYATSGSASINNIQPFLFD
                     FADMQVGLAHNGNLTNAVSLKAELEKNGSIFSSSSDTEILMHLIRRSHNPDFIGKIKE
                     ALNTVKGGFAYLIMLEDKLVAALDPNGFRPLSIGKMKNGAWVVASETCAFEVVGADWV
                     RDVEPGEIVVIDDSGIQYDSYTRDTQLAVCSMEYVYFARPDSVIHGVNVHTARKNMGR
                     RLAQEFKHEADIVVGVPNSSLSAAMGFAEESGLPNEMGLIKNQYTQRTFIQPTQELRE
                     QGVRMKLSAVSSVVKGKRVVMIDDSIVRGTTSRRIVQLLRDAGAKEVHVAIGSPELKY
                     PCFYGIDIQTRRELISANHTVEEVCEIIGADSLTYLSLEGMIEAIGIETDAPKGGLCV
                     AYFDGEFPTPLYDYEEEYLRSLEEKTSFYIENVK"
     gene            complement(8273..11992)
                     /locus_tag="U1041_001080"
     CDS             complement(8273..11992)
                     /locus_tag="U1041_001080"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001042262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEM4768194.1"
                     /translation="MAKRIFVEKKADFQIKAEALRKELTHNLQLTSLTSVRLVQVYDV
                     FHLEEDLLEQAIKHIFTEQMTDKVLSEAELGLEGAVYFAIEALPGQFDQRAASSQEAL
                     LLLGSRQEVRVNTGQLYILNGDVREEELAAIKNYLLNPVDSRFKDLDAPLVAQEFSVS
                     DTVIPSLDFFDSYGAEEFASYKREAGLAMEVEDLLFIQDYFKSIGRVPTETELKVLDT
                     YWSDHCRHTTFETELKSIDFSASKFHKQLQATYDKYLAMRTELGRTDKPQTLMDMATI
                     FGRYERANGRLDDMEVSDEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGG
                     AATCIGGAIRDPLSGRSYVYQAMRISGAGDITQPLTATRSGKLPQQIISKTAAHGYSS
                     YGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKENVVREKPVAGDVVILLGGKTG
                     RDGIGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGAVTRLIKKSNDFGA
                     GGVCVAIGELADGLEIDLDKVPLKYAGLNGTEIAISESQERMSVVIRPQDVDTFIAAC
                     RQENIHAVVVAKVTEKPNLVMTWNGQTIVDLERSFLDTNGVRVVVDAKVVDNAVNLPE
                     TRTTSAETLQEDLKDLLSDLNHASQKGLQTIFDSSVGRSTVNHPLGGRHQLTPTESSV
                     QKLPVQQGVTTTASVMAQGYHPYLADWSPYHGAAYAVIEATARLVATGANWSKARFSY
                     QEYFQRMDKQAERFGQPVAALLGSIEAQIQLGLPSIGGKDSMSGSFEDLTVPPTLVAF
                     GVTIADSRKVLSPEFKATGENIYYLPGQILSEDIDFALIKSNFETFEKWQSDYVITAA
                     SAVKYGGVLESLALMSFGSQLGAEIELAELETSLTGQLGGFVFTSKEDIPDAVKIGQT
                     TTDFTLVVNGVNLAGQDLQVAFEGKLEEVYPTEFEQATELQDVPAITSSSVIQAKERV
                     EVPVVYIPVFPGTNSEYDSAKAFEQAGAKVNLVPFVTLDAASIENSVDTMVDNIAKAN
                     ILFFAGGFSAADEPDGSAKFIVTILRNAKVRSAIEQFIEKRGLIIGICNGFQALVKSG
                     LLPYGNFEEAGETSPTLFYNDANQHVAKMVETRIANVNSPWLAGVQVGDIHAIPVSHG
                     EGKFVVTDEEFAILRDNGQIFSQYVDFTGQPSMDSKYNPNGSSHAIEGITSRNGQIIG
                     KMGHSERYEDGLFQNIPGKKDQGLFVSAVRYFTGK"
     gene            complement(12005..12712)
                     /locus_tag="U1041_001081"
     CDS             complement(12005..12712)
                     /locus_tag="U1041_001081"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEM4768195.1"
                     /translation="MKTDLLYSGKAKDIYATADGDQIVAVYKDQATAFNGGKKEQIVG
                     KGRLNNLISSLIFEKLNEAGVKTHFIKRLSDTEQLNRKVEIIPLEVVLRNVTAGSFSK
                     RFGVEEGIALSTPIVEFYYKKDELDDPFINDEHIAFLNLASPEEIAYIKEETRRINSF
                     LKDLFAQIGLTLVDFKLEFGVDSSGQILLADEFSPDNCRLWDADGNHLDKDVFRRGLG
                     ELTEVYEVVLAKLQEVR"
     gene            complement(12830..13078)
                     /locus_tag="U1041_001082"
     CDS             complement(12830..13078)
                     /locus_tag="U1041_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEM4768196.1"
                     /translation="MTREQIYQRVVELIQDEKGEDFQVQPESILADNIAADSVEIMEF
                     VLTLEDEFGVDVPDAAIERFETLSDIVDFIYEELQKRS"
     gene            complement(13071..14078)
                     /gene="plsX"
                     /locus_tag="U1041_001083"
     CDS             complement(13071..14078)
                     /gene="plsX"
                     /locus_tag="U1041_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEM4768197.1"
                     /translation="MKRIAVDAMGGDHAPQAVVEGVNQALAAFPDIEIQLYGDEAKIK
                     QYLTATERVSIVHTTEKINSDDEPVKAIRRKKEASMVLATKAVKDGQADAVLSAGNTG
                     ALLAAGVFVVGRIKNIDRPGLMSTLPTMDGKGFDMMDLGANAENTAHHLYQYGILGSF
                     YAEHVRGVKQPRVGLLNNGTEDTKGTPVHQEAYKLLAEDKSINFIGNVEARELLNSVA
                     DVVVTDGFTGNAVLKTIEGTAKSIVGQLTGSIKNGGLRAKLGGLLVKPTLKKALGAMD
                     YKKAGGAVLLGLKAPVIKAHGSSDAQSIFYTIKQTRSILEAGIVEKSVTKFSVVEESH
                     D"
     gene            complement(14075..14857)
                     /gene="recO"
                     /locus_tag="U1041_001084"
     CDS             complement(14075..14857)
                     /gene="recO"
                     /locus_tag="U1041_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEM4768198.1"
                     /translation="MERIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKFR
                     LVASIQPLTYADFIVKINDDGLSYIEDFHQVQPFKAINADIFKLSYATYILALADAAL
                     QDKVYDPALFSFLVKTLDLMESGLDYEVLTNIFEIQLLGRFGVSLNFHECAFCHRVGL
                     PFDYSYKYSGVLCPQHYQQDERRAYLDPNVPYLLDQFQAISFDELETISIKPEMKRKL
                     RLFIDQLYEEYVGIHLKSKKFIDDLSSWGQIMKPGTENEETE"
     gene            complement(14844..16022)
                     /locus_tag="U1041_001085"
     CDS             complement(14844..16022)
                     /locus_tag="U1041_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4768199.1"
                     /translation="MDLLNRFNKNLNRIEVSMIRQFDQSISDVPGILKLTLGEPDFTT
                     PDHVKEAAKAAIDANQSYYTGMAGLLELRQAAAEFVAEKYNLHYNPENEILSTIGATE
                     ALSASLVAILEAGDTVLLPAPAYPGYEPIVNMVGADVVEIDTTANHFVLTPEMLEEAI
                     IEQGDKLKAVILNYPANPTGVTYSREQIQAFADVLRKYPVFVLSDEVYAELTYTGQPH
                     TSIAEFLPEQTILIQGLSKSHAMTGWRIGLIMSQAPIIAQIIKSHQYLVTAASTAMQY
                     GAVEALKNGKDDALPMRAEYVKRRDYIIEKMADLGFKIIKPDGAFYIFAKIPAGYNQD
                     SFSFLQDFARKKAVAFIPGAAFGQYGEGYVRISYAASMEKIQTAMARLKEYLEENGTN
                     "
     gene            complement(16109..17077)
                     /locus_tag="U1041_001086"
     CDS             complement(16109..17077)
                     /locus_tag="U1041_001086"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HEM4768200.1"
                     /translation="MAFTDLKLFALSSNQKLAEQVSKKIGIPLGKSSVRQFSDGEIQV
                     NIEESIRGTHVYILQSTSSPVNDNLMEILIMVDALKRASAESVNVVMPYYGYARQDRK
                     ARAREPITSKLVANMLQTAGVNRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERR
                     GMVGDGYVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMNTSEVMNIIGDIKDK
                     TCILIDDMIDTAGTICHAADALADAGATAVYASCTHPVLSGPAMDNISKSAIKKLVVL
                     DTIEIAEDRLIDKIEHISTAELLAEAIIRIHEKRPLSPLFEASRVK"
     gene            complement(17180..18421)
                     /locus_tag="U1041_001087"
     CDS             complement(17180..18421)
                     /locus_tag="U1041_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4768201.1"
                     /translation="MKKKILATIMLSTVVLSNANYVAVISANDVDSQIAAKNQQISEL
                     TAQQAEAQQQVDAIQGQVDAIVSEQAKLTEENTRLEAESQALAADIERLSADIVSRDG
                     ALKEQARSAQVDGSASSYINTILDSKSIVDAVSRVNAMREIVSANNRMLEQQKADKEA
                     IAEKQKANQEAITTLAANRQKLEDDAQVLQVRQAELEAAKLNLAVQKATAEDEKNSLL
                     AQKAAAEEAARQAAARQAEYQAQQAALAQQQVASVSAPVVSTPVETTVTETVATVSQS
                     TPTVSTPTTSISSGSGSSAAANNARYDASSYPIGECTWGVKSQLSWVGPYWGDAKQWL
                     ASARAEGFSTGSTPQVGAIAVWTGGYYGHVAVVTAVQSSTSIQVVESNYMGRRYIGNH
                     RGWFNPTTTSEGAVYYIYPPY"
     gene            complement(18506..19021)
                     /gene="mreD"
                     /locus_tag="U1041_001088"
     CDS             complement(18506..19021)
                     /gene="mreD"
                     /locus_tag="U1041_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEM4768202.1"
                     /translation="MRNKMIEIFMFPILFFILLLDGQISTLVTNWSVGLFTISSHLVL
                     MLAIFYANYVSLGFSLFIFTLLGLVYDISYLNLIGIATTTLPLVLYCIYFFFQGAVSK
                     RGINILILLVAIFQFEFISYSFARIFHITNLSVFIFVFNKLLPSLLFNLVLFFVLQPS
                     FERLFGITNKT"
     gene            complement(19011..19847)
                     /gene="mreC"
                     /locus_tag="U1041_001089"
     CDS             complement(19011..19847)
                     /gene="mreC"
                     /locus_tag="U1041_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEM4768203.1"
                     /translation="MNKFSKLVVVVSIFLLLSFSLLFVTFSKGLQVPYLNNIVRVVVT
                     PIQSVISVPTRFFSEQKDVLTDLMNAYEENKQLKEAIMSLEGMAAENTSLKEENASLR
                     SSLGVVSDFPEKQLIPGSVLVRTPSAWSEHIAINIGETSGVTSNALVVANGGLVGIVS
                     SLSSDSAVVTLFTNSDEFTKLPVKISVDSKEIYGILSGYDADTNSFIINQLNSADEIA
                     VGSNVVTSDLAGATSANIQIGKVLSVKSNSNSLNREVYVEPTASFSNIYSVLVVGQTN
                     AQ"
     gene            complement(19907..19994)
                     /locus_tag="U1041_001090"
     tRNA            complement(19907..19994)
                     /locus_tag="U1041_001090"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19958..19960),aa:Ser,seq:gct)
BASE COUNT         5932 a         4821 c         3733 g         5518 t
ORIGIN      
        1 tcaactcctt cttggctgac aactgtctca ccggctagga gttcgttatt cggaaactca
       61 agggtatcat aagcgacggg ttcagtttga acactatcta catgctcaac tgccaaactt
      121 ggtttatctg gattgacagc attgtctgta cccggtaaat aagagttagg atgaatcggt
      181 tttactattt catcactctt actttccttt atgtaaccaa tatatctata gccctcaata
      241 gccatcggtt ctggcaattg ttcacctacg ctgatagata attcctgatt aaatcgagcc
      301 aaggtttgat tggttaaaga aaaggcagga ggtgctaata acaatgagcc tgtcgcccct
      361 aaaatgaaca atcccgcaaa ctcttttttc cccttacgac ctttacggat agccaaaatc
      421 agcaaccctg ctccaacaag tgctcctgtt acttgcccaa accattcatc acctgtagcg
      481 ggcaaaatgc cctctgatac tgactgcttt ggcttataaa tcaagtaata ggcattgtca
      541 ctttcttcta ctaatttcgg taattcattt acgattaatt gcttttctga cgctgttaat
      601 tcatcttcgg caatatagcg ataatgcact gttttggcac tatcttcagc aaatacctgt
      661 ctttctgaag aaaatgaaaa cagcatgaaa agactagcaa tggtagcaga tactagtcca
      721 aacgatgttt ttctcaaaga aaagcgatga acggtctgtc cagaattttg tttcatataa
      781 tacttcctta atattttata gaaaaatcaa aagcaaacat tttcggcctc acgtgcattt
      841 agaaaaaaga aaagaattgc gtgcaagcta tcccaaattt cctctgcgaa agatagtctg
      901 attttgatta agtggtcagt ttgtttcagt agcccacctt gaacgaaaga tggttggcag
      961 ttgagctagc acttggttaa accattaaag taaaactgaa ggactataat acgcatatta
     1021 aaaaatctct ctaatccaat attaaaagat tacagagttc caatttacct ttataccatc
     1081 agttcctatt tcaagaccag gtgtagctcc cagtacctat tctcaaaatc tatgccaaat
     1141 ctcagtatag cgattgtatc gcaataatac caactactga ctgacaattc acacaccttt
     1201 ttgttagatg gtacattccc ccttccccag tttcaaaaat cttgttgatc tcgctacaca
     1261 tgggatatga tatagaatcc tcttgcaagc acagcaaaaa taaacaaaac ctatctcact
     1321 ggctagagtc gcaattagct aactgttcct agtcttttag cttgatagct ggtaaactga
     1381 aaacctgctg gaaatcttca tgcgtcaaag caataaaaga ccgactgaat agctatctgt
     1441 agacttctgg tttcacgcac cattatacta gaatctgagg aatgttgcaa cacagatagt
     1501 cataaatcat tatgttattc ttattttctc cgattccaaa ataaatccct aaatttactg
     1561 cctataacta tgataacgac taatactaaa tttccaaaca atcttataaa caagtaaaaa
     1621 gatgatatag ccagcagaaa tagtccctaa atctgctaag aaaggtaacg attttgttat
     1681 tgacatcagt gggaaatatc caataaatgc atatggaatg aaccataata attttgataa
     1741 ccagccagga taaatactat ttggatagcg agttgtttca tccagtctcc aaacaataaa
     1801 gttaatggaa tacacatctt tgataaaaaa tgttaatgag ttaacgaaga ggtggattgc
     1861 tgcgtaacat aaaatactac ctattagtaa aaggatgatt ttcagtataa accaagcaga
     1921 tagcgtttca aattctgtaa gcagtgccat ccaaaatatt atcagaccaa tacaaaactc
     1981 gccaatactt tcaaaatcta tctttgaaaa aatgatgagt aatagggtgt ttactggcct
     2041 aagtaataag acatcaaatg ttccttctct gacataatct ccaataaata aggtgttgat
     2101 gaaaatgaaa ttccagccag ctctggccat tgttacaaat ccaaacaaga gtactaactc
     2161 atttgtagac catccaggaa aatttgatag attatctaaa aatactttta aaatatagat
     2221 tgatataaca gtgttcacgc tatagcctat tattccaatg acggcatctt ttctatattg
     2281 gatatacctc ttccattgaa gtttcataaa atgaatatac aagtaaaaat atcttgtcat
     2341 cactaacctc cataatagtt catcacttta aatagcttct tctgatacat agaaataaat
     2401 aaaaccagaa ggagaaccca aaacatctgt aagcacaatt gttgtaaaac atattgggct
     2461 ggtaataaag ccgataaaat agatgaagga actgataaca tagcatagaa aggagttaaa
     2521 acaataagtt tttgcaacat ttctggaaaa aagctaatag gtaatactga gccaccaaaa
     2581 agcatcaaca aggcatcgta aaattctaaa acacctaaaa tctgattaaa acggatagat
     2641 aaaagcccta agagatagcc aaataaaaat gaaatcaata gacctaatag agccgacatg
     2701 ataaaagata gcaccatttc aggaacaaga gatattcctg taacgaatga ataaaagaaa
     2761 agagcaaacg tcaagggagt gactacaaaa atcaaatcat aaacaaatga acctacttgt
     2821 ctaaaaaaat gcatccccat aaaactatgg ggtcttaaaa aatagactgc cgtatcacct
     2881 ttttgaatca tctctgaaat aatggaggcg gtacgatgat ctggaaaaag aatgaacatc
     2941 atcctagaaa tcactgcata tagaacgagt tgagatgatg tgttttcagt gactacactg
     3001 gtccaaaccg aaatctgaat ggctacaacc aaaaaggcac caagaattgt caaaattgta
     3061 ctcaccctat acgattttcg tctcctaaat tctgctattg tataagctaa tacattcacc
     3121 ttgatgtctc cttatccaat aataatatat ccgctaaact tgcatctgta atatgataat
     3181 ctctgatttt ttggtctttg acaaactctt gaagtaaatc taatttctct tcttcaatca
     3241 acatttcagt cattgaagcg aggctgggta aaaactagcc aataactaaa aaatacacag
     3301 acaaattgag ctgcttcaga tgaaattcaa ccaaactgtc tgtgtttttc tttctgttta
     3361 tactctcttg gactaatttc ttagccaatt tcgtaagatt catgctcatt agaaggaatc
     3421 ctatctcagt ttttcccagt ctctagatat agtctctcaa tgtctaaaat gtctgactcc
     3481 tgtaaagacc atggtcaagc cgtatttatt ggccatgtca atggagtctt ggtcacggac
     3541 ggatccaccc ggctgaatga tagccttgat acctgccact gcgatttctt ccacgttatc
     3601 agcaaatggg aagaaggcat ctgacgccaa aacagctccg tctaaacgat ccttggcttg
     3661 ctcgatagcg atgcggacgg acgccacacg gttggtttgc cccggtccca cgcccaaggt
     3721 catcttgtca ttggtgatga tgatgccgtt ggacttgaca tacttggaag acttccaggc
     3781 gaactccatg gccgcccact cttgctcgga cggttgacgc tcggtcacca cctgccagtc
     3841 cgctgggctt tccaccacca catcctgatc ctgcaccaag agtccgccga caacgcctgt
     3901 gaactctttt tccacttcgc tggcatcctg tgcatcaaag gccaattcca aaatccgaag
     3961 atttttcttt ttattggtca aaatcgctag cgcttctgcc gagtagctcg gtgcgatgat
     4021 gatttctaag aaaatcgggt gcatcttttc agccgtcgca gcatccactt ccctgttcag
     4081 tacgacaatg cctccgaaaa tcgatactgg gtcagcttca taagcgtaat cccaagcttg
     4141 ctcaatagtc tctgcctgcc cgataccaca agggttcatg tgtttgagag ccacaacagt
     4201 tggacggtcc ttgaaatcac ggataatacg gatagccgca tccgcatctc gaatattatt
     4261 gaaggacaat tccttaccgt ttagctgttt agcagctgca atagagtaag ctgtcggaag
     4321 ggcattttgg tagaaatccg catgttgctg gggattttca ccgtaacgca tgggctgatt
     4381 aagatcataa gtaatcgtta atttttcagg cttatcttcg cctacctgct tggtaaaata
     4441 atctgctatt agggcatcat aagctgcggt atgacggaaa accttagctg ccaaccgctg
     4501 acgcgttggg taggtcgtct gaccctgctc tgctatttcc cctaaaaccg tcggataatc
     4561 tgctggatcc accacaacgg ttacgctagc gtggtttttg gctgctgaac gaagcataga
     4621 tggcccgccg atgtcgatgt tctccaccgc caagtcgtag gtcacatctg gacgtaaaat
     4681 agtctctttg aagggataaa ggttgaccac taccaagtca atcagggcaa tttcatggtc
     4741 gttggctgct tgcaggtggc tgtccatatc ccgacgagcc agcaagcccc cgtgtatttt
     4801 cggatgaagg gtcttgacac ggccgtccat catctcagga aaaccagtca catcgtcaat
     4861 ggcgatggta gttacaccag cctgatccaa ggcaaccttg gtacctcctg tcgagatgat
     4921 ttcccagcca agcttggtca attcttgggc aagttctacg atgccattct tatctgatac
     4981 gctaatcagt gcgcgttttg tcatgatttc tccttttcct taccagaact acttgatttg
     5041 ggtcatgagg aatcctgata aaatcaagga tagaccataa gccagaatca aacgggctgg
     5101 attttctaag tttacaaaaa taatgctatt aaacagcaga gctgccaaaa caaataccaa
     5161 aataaatgag atgactttct ttatcataac actcttcttt tcgccccaaa ctcctccaaa
     5221 accgctggat agagttggta ctccgcttca tgtattcttg cttcaaaggt ttccaaggta
     5281 tcatcggcta gtctaggcac tcgaacttgc tgaataattt gtcctgtgtc aataccacta
     5341 tccacccagt ggactgttac gccactttca gatacaccag cctgccaggc atcttcaatc
     5401 ccatgagcac ctggaaattc cggcaagtag gctgggtgga tattaatgat acgaccttcg
     5461 tactgagcca gcagggttgg tcccacaatc ttcatatagc ctgccaagat caccaagtca
     5521 atctgatgct ggtctaagag ttggatgagt gcttcttcgt aggcctgctt atctgaaaac
     5581 tctttgagtt caaaagtaaa ggttggtaca cctagttttt cagctcgttc caagacatag
     5641 gcgtttctgc agtctgaaaa gacaaaaacc acttcaaact gttttgcgat gacttggaaa
     5701 ttggagccgt tgcctgatgc aaacactgct attcgtttca tttgatgacc acactcttat
     5761 cttccttggc gatgatgcga ccaatggtgt aaacttcctc gtcaactagt tgacagacgc
     5821 tgtcaacctt gtctggacta acagccagta ccattccgat acccatattg aagatttcaa
     5881 acatttcttc atgtttgatg ttgccatatt tttcaagtgc tgtaaagatt ggaaggactg
     5941 gaatcttatc ttcttcaatc tcagctgcaa gattatcagc aaacatacgg ggaacatttt
     6001 cgataaagcc gccgcctgtg atgtgggcaa tgccgttgac taggcctgct tttaccagag
     6061 gcaatacctg ctggacatag atacgggtcg gctctaagag aacatccttc agagctctgc
     6121 cattgagctc tggcaacaga gcgtccccag aaacatccgc aaacacgcga cgaacaagag
     6181 aataaccgtt ggagtgaata ccgcttgagg ccaagccaag aagaatgtcg ccttcctgga
     6241 ccttactgcc gtcaataatc tgagacttct ccgcaatacc gacggcaaag ccagccaggt
     6301 catagtcatc ctcgccgtac ataccaggca tttcagccgt ttcaccgcca atcaatccgc
     6361 aaccggcttg gacacagcct tcagccacac ctgctactac ctgctctagc ttggctggct
     6421 cattttttcc agtcgcaatg tagtcaagga agtaaagcgg ctctgcacct gctgcgataa
     6481 tgtcgttgac acacatggcc acgcagtcct gaccaatcgt atcatgcttg tcatactgga
     6541 ttgctagcat gagcttggtg ccgacaccgt ctgtcccaga taccaagact ggctctttga
     6601 catccagctt agtcaggtca aacataccgc caaaaccacc gagggctccc ataacaccca
     6661 agcgttctgt ccgaaccaca tgcttcttga tgcgttcgac aacttcatat cccgcttcga
     6721 cgtcaacgcc cgattgggcg taggcatttt tatttgtcat tttgattcct ttcaacagtt
     6781 tacaggtctg tcaagtaacg ttgacacatc tgtctttact tgacattttc aatgtagaaa
     6841 ctcgttttct cttctaggct gcgaaggtat tcttcctcat agtcatagag aggcgttgga
     6901 aattctccgt caaagtaggc tacacagagc ccgccttttg gtgcatcggt ttcgatgccg
     6961 atggcttcaa tcatcccctc aagagaaagg taggttagac tatctgcccc aataatctca
     7021 cagacttcct caacggtatg gttggctgaa atcagctccc gacgggtctg aatatcaata
     7081 ccatagaaac acgggtactt gagttctggg ctgccgatag ccacatggac ttcttttgcc
     7141 cctgcatcac gaagaagctg gacaatgcgg cggctagttg taccgcgaac aatagagtcg
     7201 tcaatcatga ccacacgctt gcctttgaca acgcttgaaa cagctgacaa cttcatacga
     7261 acaccctgct ctcgcaattc ctgtgtcggc tgaataaatg tccgttgggt atattggttt
     7321 ttgattagcc ccatttcatt tggcaaacca gattcctctg caaatcccat agccgcagat
     7381 agggaggagt ttggcacacc aaccacgata tctgcttcat gtttgaactc ctgtgccaaa
     7441 cgacgaccca tgttttttct ggccgtgtgg acattgacac catgaataac cgagtccggt
     7501 cgggcaaaat agacatactc catagagcaa acagccagtt gcgtatctct tgtatagcta
     7561 tcatattgaa ttcctgaatc atcaatgacg acaatttcac caggctccac atctcgcacc
     7621 cagtcagccc ccactacttc aaaagcacaa gtttcgctag caactaccca ggcaccattt
     7681 ttcatttttc caatagaaag tgggcggaaa ccatttgggt ccaatgccgc aaccaatttg
     7741 tcttccagca taatcaagta ggcaaagccc cctttaacag tattgagggc ttccttaatt
     7801 tttcctatga aatccggatt gtgactacgg cgaatcaaat gcatgaggat ttctgtatca
     7861 gaagaagaag agaaaatgga accatttttt tcaagttcag ccttcaaact gactgcattg
     7921 gtcaaatttc cattatgtgc caaacccacc tgcatatctg caaaatcaaa taggaagggc
     7981 tggatattat tgatagaagc agagccagaa gttgcatagc ggacatggcc aatggcagca
     8041 tttcctttca gaacctccaa atccgctgga tttttaaaga cttctgcaat taggcctgtt
     8101 ccgcgatggc gacgtaaatg cccaccatcg tttgctaaaa tccctgctcc ttcttgccct
     8161 cggtgctgca aactgtggag gccaaaatag gtcacctgag cagcctgcgg atgtccccaa
     8221 atgccgaaaa ctccacattc ttcattgagt gatttaactt cgtatgtcat agttattttc
     8281 ctgtaaaata gcgaactgct gaaacaaaga gcccttggtc tttcttacct ggaatgtttt
     8341 ggaaaagacc gtcctcgtaa cgctccgaat gccccatttt cccgataatc tgaccgttgc
     8401 gactggtaat cccctcaatg gcatggctag aaccatttgg attgtactta gaatccatac
     8461 ttggctgtcc tgtaaagtca acgtactgac tgaaaatctg accattatct cgcaagatag
     8521 cgaattcttc gtcagttacc acgaatttcc cttccccgtg agaaactggg atagcgtgaa
     8581 tgtcgccgac ttggacacct gccaaccacg gtgagttgac attggcaatc cgcgtttcca
     8641 ccattttagc aacgtgctgg ttggcatcgt tgtaaaagag ggtcggactg gtttctcccg
     8701 cctcctcaaa gtttccatac ggcaacaagc ccgatttgac aagggcctgg aaaccattac
     8761 agataccgat gatgaggcct cttttttcga taaattgttc aatagcagag cggaccttgg
     8821 cgtttcgtaa gatggtcacg ataaacttgg cagacccgtc tggctcatcc gcagcggaga
     8881 atccacctgc aaagaataga atattcgcct tagcaatatt gtcaaccatg gtgtcaaccg
     8941 agttttcaat gcttgctgca tctaaagtca caaatggaac cagattaacc ttggcaccag
     9001 cctgttcaaa ggccttggca gaatcatatt ctgagtttgt acctgggaag actggaatgt
     9061 aaaccacagg tacttcaact ctttccttgg cttgaataac cgatgaactg gtaattgctg
     9121 gaacatcctg caactccgtc gcctgttcaa attctgttgg gtaaacttct tctagtttgc
     9181 cctcaaaagc tacttgcaag tcctgtccag caaggttgac accattgaca accagtgtaa
     9241 agtctgtagt ggtttgccca attttcacag catctggaat gtcttctttg gatgtgaaga
     9301 caaatcctcc gagctggcct gtcaagctgg tttcaagctc cgccaactcg atttctgcac
     9361 cgagctggct accaaaggac atgagggcta gactttctaa gacaccgccg tacttgactg
     9421 cactagcagc cgtaatcaca taatcgctct gccatttttc aaaagtctca aaattagact
     9481 tgatcaaggc aaaatcaatg tcttctgaca aaatctgacc tggtaagtaa taaatgttct
     9541 cgccagtcgc cttgaactca ggtgagagaa ccttgcggct gtctgctatt gtcacaccaa
     9601 aggcaaccag ggtcggcggt acagtcaagt cctcaaagct accagacatg gaatccttgc
     9661 caccgataga cggcaggcca agctgaatct gagcctcgat agagccaagc aaagccgcta
     9721 ctggctgacc gaaacgctct gcctgtttgt ccattcgctg gaaatactcc tgataggaga
     9781 agcgagcctt ggaccagtta gcccctgttg ccaccaagcg agccgttgct tcgatgaccg
     9841 cataggcagc cccgtggtaa ggggaccagt ctgccagata aggatggtaa ccctgagcca
     9901 tgacggatgc cgttgtcgtc acaccctgtt ggacaggtag tttctgcacc gaactttctg
     9961 tcggtgtcaa ttggtgacga cctccgagtg ggtggttgac cgttgagcga ccaacagatg
    10021 agtcaaagat agtctgcaaa cctttttgac tagcatggtt gaggtctgat agaaggtctt
    10081 tcaagtcctc ttgtagcgtt tcagcagatg ttgtacgtgt ttccggcaag ttgacagcat
    10141 tgtcaactac ttttgcatca actactacac gaacaccatt tgtatcaagg aaagaacgtt
    10201 ccaaatcaac aatggtttga ccattccaag tcatgactag atttggtttt tcagtcactt
    10261 tggctacaac aaccgcatgg atattttcct gacggcaggc tgcgatgaag gtatcgacat
    10321 cttgaggacg gataacgaca ctcatccgct cttgcgattc agaaatagcg atttccgttc
    10381 cattcaagcc tgcatatttt agaggaacct tatccaaatc gatttcaaga ccgtctgcca
    10441 gctcaccaat agctacgcag acacctcctg caccaaagtc attagatttt ttaatcaagc
    10501 gagtcacggc accattgcgg aacaagcgtt ggattttgcg ttcttcaatg gcatttcctt
    10561 tttggacttc cgcaccagcc gtttccacag actcgactgt ctgtaccttg gacgatcctg
    10621 ttgctccacc gataccgtca cggcctgttt tgccacccaa caagatgacc acatcgcctg
    10681 cgactggttt ttcacggacc acattttcct ttggagcagc accaacaacg gcacctagtt
    10741 ccatgcgttt tgcgacaaaa cctgggtgga aatattcacg cacataagtg gtcgcaagac
    10801 cgatttgatt tccataagaa gaataaccat gtgccgctgt ttttgaaatg atttgctgtg
    10861 gcaatttccc tgagcgagta gccgtcagag gttgggtaat atcgcccgca cctgaaattc
    10921 gcatggcctg ataaacatag gaacgacctg acaatggatc acgaatggca ccaccgatac
    10981 aggttgcggc accaccgaaa ggctcgattt ctgttgggtg attatgggtt tcattcttga
    11041 acatgaggag ccatggctct ttcacgccat ccacatccac ttcgatttcc accgagcagg
    11101 cattgatttc atctgacact tccatgtcat ccagacgacc atttgcccgc tcataacgac
    11161 caaaaatcgt cgccatatcc ataagcgtct gcggtttgtc tgtccgacct aactctgttc
    11221 gcatagccag atacttgtca taagtcgcct gcaattgctt gtggaatttt gaggctgaaa
    11281 agtcaataga cttgagttcc gtttcaaatg tcgtatgacg gcagtggtcg ctccaatagg
    11341 tgtccaaaac cttgagttct gtctcagttg gcactcgacc aattgacttg aagtaatcct
    11401 gaatgaagag cagatcttcc acttccatag ccaaaccagc ctcacgcttg taagacgcaa
    11461 attcctctgc cccgtagcta tcaaaaaagt ccaaacttgg aatgacggta tctgacaccg
    11521 aaaactcctg ggctaccaaa ggagcatcca ggtccttgaa acgcgaatcc acaggattga
    11581 gcaaatagtt cttgatagca gctaactctt cttcccgcac atcgccattc aagatataga
    11641 gctgacctgt attgacacgc acctcctgac gactacccaa taagagaagg gcctcctgac
    11701 tgctggcagc ccgctggtca aactgcccag gaagtgcctc aatcgcaaaa taaacagccc
    11761 cttccaagcc cagctccgct tccgacaaga ccttgtccgt catctgctcg gtaaagatat
    11821 gcttaatagc ttgctccagc aagtcctcct ccaaatgaaa gacatcataa acctgcacca
    11881 gacgtacact cgtcaaactt gtcaactgta aattatgagt caactccttg cgaagagcct
    11941 ccgccttaat ctgaaaatcc gccttcttct caacaaaaat ccgcttcgcc attttttcca
    12001 atccttatct cacttcttgt aactttgcca atacgacctc gtaaacctcg gtcaactccc
    12061 cgagaccccg acggaaaaca tccttgtcca gatggttgcc atccgcatcc cacaaacgac
    12121 aattatccgg agaaaactca tccgccaata aaatctgacc agacgagtca accccaaatt
    12181 ctagtttgaa atccaccaaa gtcaacccaa tctgagcaaa caagtctttc aagaaactat
    12241 tgatacgccg tgtttcttcc ttgatatagg cgatttcttc tggactagct agattaagaa
    12301 aagcaatatg ttcgtcgttg ataaaaggat catccaactc atctttttta tagtaaaatt
    12361 ccacgattgg agtgcttaat gcaattcctt cttccacccc aaagcgtttt gagaaagacc
    12421 cagctgtcac atttcgcaaa acaacctcca gcggaataat ctccactttt ctatttaact
    12481 gctccgtatc agacagtcgc ttgataaaat gtgtcttaac tccagcttca ttcaattttt
    12541 caaaaatcaa agatgaaatc agattattga gccggccctt gcccacaatc tgttctttct
    12601 taccaccatt aaaagccgtc gcctggtcct tgtaaaccgc aacaatctgg tcaccatcag
    12661 ccgtagcgta gatgtctttt gcttttcctg aatagagaag gtctgttttc atgagaatgt
    12721 tcgcctttca taaaatattc tagtcttttc gtttattcta tcacataaca ttcgcgtaaa
    12781 aaagcattta acggtatttt gtaaaaaaat aaagaaaaac gcccgtaaac tacgaacgtt
    12841 tctgtaattc ttcataaata aaatccacaa tatcagacaa ggtttcaaag cgctcaatcg
    12901 cggcatctgg aacatcgaca ccaaactcgt cttccaaagt caaaacgaat tccataattt
    12961 ccaccgaatc cgctgcgata ttatctgcca aaatagattc aggttgaacc tgaaaatctt
    13021 ctcccttttc atcctgaatc aattcaacaa cccgctgata aatctgctct ctagtcatga
    13081 ctttcctcca ctactgaaaa tttggtaacc gatttttcga caataccagc ctccaaaata
    13141 gaacgtgtct gcttgatggt atagaaaatt gactgggcat cgctggaacc gtgagccttg
    13201 ataacaggtg ccttcagacc aagcaagaca gcaccgccag ccttcttata atccatagcc
    13261 cccagtgcct ttttaagagt cggtttgacc aaaagaccac ccaatttagc acgcagaccg
    13321 ccatttttga tagagccagt caactgacca acgatggatt tagccgttcc ctcaatggtt
    13381 ttcagcacag cgtttcccgt gaaaccatct gtcacaacca catccgccac gctgttgagc
    13441 aactcacgcg cctccacatt tccgataaag ttgatggact tgtcttccgc caagagttta
    13501 taagcctctt ggtgaactgg cgtgcccttg gtatcttccg taccgttgtt caaaagtccc
    13561 acacgaggtt gtttgacccc acgcacatgc tccgcgtaaa atgagccgag gataccatac
    13621 tgatagaggt gatgggctgt attttcagca tttgccccca aatccatcat atcaaatccc
    13681 ttaccgtcca tagtaggaag agtggacata agaccaggac ggtcgatgtt cttgatgcga
    13741 ccgacgacaa agacacctgc cgccaacaga gcacccgtat ttccagccga taagaccgca
    13801 tctgcttgac catccttgac agccttggtc gctaggacca tcgaagcctc ttttttccga
    13861 cgaatagcct tgaccggctc atcatctgaa ttgattttct ccgtcgtatg gacgatgctg
    13921 acacgctctg tcgctgtcaa atactgcttt attttggcct catcaccata aagttgaatt
    13981 tcaatgtctg gaaaggcagc caaggcttga ttgacacctt ctaccactgc ctgaggggcg
    14041 tggtccccac ccatagcatc tactgcaata cgtttcattc tgtttcctca ttttctgttc
    14101 ctggtttcat aatctgcccc caagaagaca aatcatctat aaatttcttg gatttcaagt
    14161 gaatccccac atattcctcg tacagctggt caataaaaag ccgtaatttt cgcttcatct
    14221 caggcttgat ggaaatggtt tctagctcat caaaggaaat agcctgaaat tgatcaagta
    14281 gatagggaac attggggtcc aaataagccc gtcgctcatc ttgttgatag tgttgcggac
    14341 acaagacacc gctatacttg taagaataat caaaaggcag accaacccga tgacaaaaag
    14401 cacactcgtg aaaattcaga ctgactccaa aacgtcccaa gagctgaatt tcaaagatat
    14461 tggtcaagac ttcataatcc aaacccgact ccatcaagtc caaggtcttg accaaaaaag
    14521 aaaagagagc tggatcataa accttatcct gcaaggccgc atctgccaag gccaagatat
    14581 aggtcgcata gctgagtttg aaaatatcag cattgatcgc cttaaaaggc tggacttgat
    14641 gaaaatcctc aatataagac agcccatcat cattgatttt gacgataaaa tccgcatagg
    14701 tcaaaggctg gatagaagct accagcctga acttagaggc atgtttcacg aaaaacattc
    14761 gcttgccagc cttctctgta aaaatcttga ccagcttatc atcttctcga aaattccgat
    14821 tatataggac taatcccctg gtttcaattc gttccatttt cttctaaata ttccttcaaa
    14881 cgagccatag ctgtttgaat cttctccata cttgctgcgt aggaaattcg cacatagcct
    14941 tctccatact gaccgaaggc tgcgcctgga ataaaggcca ccgctttctt tctcgcaaag
    15001 tcttgcaaga agctaaagga atcttgattg taacccgcag gaatttttgc aaagatgtaa
    15061 aatgctccat caggcttgat aattttaaag cccaagtccg ccatcttctc gatgatgtaa
    15121 tccctacgct tgacgtactc cgcccgcatc ggaagagcgt catccttacc gtttttcaag
    15181 gcctcaaccg caccatactg catagcagtt gacgccgctg tcacaagata ctggtggctc
    15241 ttgataattt gagcgatgat gggagcctga ctcataatca agccaatccg ccaacctgtc
    15301 atggcatgag acttggacaa tccctgaatc aaaatggtct gttctggcaa aaactccgca
    15361 atcgaagtat gaggctgacc agtgtaagtc aactccgcat atacctcatc tgataggaca
    15421 aagacaggat acttacgcaa gacatccgca aaagcctgaa tctgctcacg tgagtaggta
    15481 acacctgttg gattggcagg atagttgaga atgacagctt ttagcttatc cccctgctca
    15541 ataatcgcct cttccaacat ctctggcgtc aagacgaaat gattggctgt cgtatcgatt
    15601 tcaacaacat cagctcctac catattaaca ataggctcat aaccaggata ggcaggggca
    15661 ggcagaagaa ctgtatcccc agcctccaaa atagcaacta aactcgctga cagagcttct
    15721 gtcgcaccga ttgtagagag aatttcattt tctggattat agtgcaaatt atatttttct
    15781 gccacaaact cagctgctgc ctgacgcaac tccaaaagac cagccatacc agtataataa
    15841 ctctggttag catcgatagc agccttagcc gcttctttaa catgatcagg cgttgtaaaa
    15901 tcaggctctc ccaaggtcag tttcaaaatc cctggaacat ccgaaataga ctgatcaaac
    15961 tgacgaatca tcgaaacctc aatccgattc aaattcttat taaaacgatt taataaatcc
    16021 attctgccac ctcaaaaaca tataaaacta ttataataca ttttgaaaat aaatgtaaaa
    16081 aagaagagtc atttgactct tctcatacct atttaacacg acttgcctca aacaaaggtg
    16141 acaaaggacg tttttcatga atacgaataa tcgcttccgc taataattct gccgttgaaa
    16201 tatgttcgat tttatcgatt aagcgatctt ctgcaatttc aattgtatca agaacaacca
    16261 atttcttaat tgctgactta ctaatgttat ccatagcagg ccctgacaat actgggtgcg
    16321 tacatgaagc ataaacagct gttgcccctg catctgccaa agcatccgct gcatgacaga
    16381 tggtacccgc agtatcaatc atatcatcaa tcaatataca agttttatcc ttaatatcgc
    16441 caataatgtt catcacttct gatgtattca tcttatcaac actacggcgt ttatcaataa
    16501 tagcaatcgg tgtcttcaag aactgtgcta acttacgggc acgtgtcaca ccaccatggt
    16561 caggtgatac aacaacatag ccatcaccta ccataccacg acgctcaaaa taatccgcaa
    16621 tcaatggagc acccatcaaa tgatcaacag gaatatcgaa gaatccctga atctgcgcag
    16681 catgcaaatc aattgtcaac aaacgattga ctcccgctgt ttgtaacata ttggcaacta
    16741 attttgaagt gattggctca cgagcacgag ctttacgatc ctgacgtgca tagccatagt
    16801 aaggcattac aacgtttact gattcagcag atgcacgttt aagagcatcg accataatca
    16861 aaatctccat taaattatca ttaactggtg agctagtgga ttgaagaata tacacgtgag
    16921 ttccacgaat ggattcctca atatttacct gaatctcacc atctgaaaat tgacgaacac
    16981 ttgattttcc tagaggaatt cctatttttt tcgacacctg ttcagctaac ttctgatttg
    17041 acgaaagagc gaacaatttt aagtcagtaa acgccatgac agcctcctat atatttctac
    17101 ctttactatt ttaacccttt ttccttcatt tttcaaacaa aaatagagcg caaatccaca
    17161 cgctctattt gaaaatttct taatatggag ggtaaatgta gtaaactgca ccttcagatg
    17221 tagttgtagg attaaaccaa ccacggtggt taccaatata acgacgaccc atgtagtttg
    17281 attcaacaac ttggatactt gttgaagatt gaacagcagt aacaaccgct acgtgcccat
    17341 aataaccacc tgtccaaaca gcaatcgcac ctacttgtgg agtagaacct gtactaaaac
    17401 cttcagcacg tgctgatgct aaccactgtt tagcatctcc ccagtaagga ccaacccatg
    17461 aaagttgaga tttaactccc caagtacact caccaattgg gtaagatgaa gcgtcataac
    17521 gcgcattatt tgctgccgct gaactacctg aacctgatga tatagacgtt gtaggtgtgc
    17581 ttaccgttgg tgtagattgt gatactgtcg caaccgtttc agtcactgta gtttctactg
    17641 gcgttgacac gactggtgct gatactgagg ctacttgttg ctgtgctaga gctgcctgtt
    17701 gtgcttgata ctccgcttga cgagctgccg cttgacgagc tgcttcttct gcagctgcct
    17761 tttgcgccaa caatgaattt ttctcatctt cagcagtagc tttctgcaca gccaaattta
    17821 acttagcagc ttccaattca gcctgacgca cttgcaatac ttgggcgtca tcttccaatt
    17881 tttggcgatt agctgccaaa gtagtgattg cctcttggtt tgccttttgt ttttcagcaa
    17941 ttgcttcctt atcagctttt tgttgttcca acatacggtt attagctgaa acaatctcac
    18001 gcattgcatt aacacgagaa acagcatcaa cgattgattt tgaatctaaa attgtattaa
    18061 tatagcttga agcagagcca tcaacttgag cactacgcgc ctgctctttt aaagcaccat
    18121 cacgtgacac aatatcagct gacaaacgct caatatctgc cgccaatgcc tgcgattctg
    18181 cttccaaacg agtattttct tctgttaatt tcgcctgttc actaacaatt gcatcaactt
    18241 gtccttgaat agcatcaact tgttgttgag cttcagcttg ttgtgctgtc aactcactaa
    18301 tctgttgatt ttttgctgca atctgactat ctacatcatt cgcactaatc acagctacat
    18361 aattagcatt agatagaacg actgtactta acataattgt agccaagatt tttttcttca
    18421 tatccgaaca taactcctct atactttctg actctctcat tttatcaaaa aaattgcgta
    18481 agtatattac gcaattatta catttctatg tcttgtttgt tattccaaat aaacgctcaa
    18541 atgacggttg tagtacgaaa aataagacca aattgaatag tagacttgga agtaatttat
    18601 taaaaacaaa gataaacaca gacaagtttg ttatatgaaa aatgcgagca aatgagtaac
    18661 taataaattc aaattgaaaa atagctacta gtaaaatcaa aatattaatt cctcgcttgc
    18721 tgacagcacc ttgaaagaag aaatagatgc aatataaaac taaaggaaga gttgtagtag
    18781 caataccaat cagattaaga taactaatat catataccaa acctagcaaa gtaaatatga
    18841 ataatgaaaa accaagagat acataattag cataaaaaat agctaacata agtaccaaat
    18901 gacttgaaat agtaaataat ccgaccgacc aatttgttac caacgttgaa atctgtccat
    18961 caagtaataa aataaagaac aagatgggaa acatgaatat ttctatcatt ttattgcgca
    19021 tttgtttgac ctaccactaa aaccgaataa atgtttgaaa aactagctgt cggctcaaca
    19081 tatacttctc tatttaaact gttactattt gatttaaccg ataaaacttt accaatttgg
    19141 atatttgccg aagtcgcacc agccaaatca ctcgttacaa cattgctacc cactgcaatt
    19201 tcatcagctg agttcaactg attaatgata aaactatttg tatctgcatc atagcccgat
    19261 aaaataccat aaatttcctt agaatcaaca gaaattttca caggcaactt cgtgaattca
    19321 tccgaattcg taaataaggt aacaaccgcc gaatctgaac tcaatgaact cacgattcca
    19381 actaatccac cattagcaac cacaagtgca ttagatgtca caccactagt ctcaccaata
    19441 ttaattgcaa tatgctccga ccacgctgaa ggagtcctca ccaaaactga tcctggaata
    19501 agttgttttt caggaaaatc agataccaca cctaaactgc tacgaagcga tgcattctct
    19561 tctttcaagc tagtattttc agcagccatc ccttcaaggc tcataatagc ttcctttaat
    19621 tgtttatttt cctcgtaagc gttcatcaaa tctgtcaaga catctttctg ctcagaaaaa
    19681 aatctagtag gcactgaaat aaccgattga attggcgtta caacaaccct aacgatatta
    19741 tttaaatatg gtacctgtaa ccccttagag aaagtcacaa acaaaagaga aaatgacagt
    19801 aataaaaaga tagaaacaac tactactaat tttgaaaatt tattcataat agaccctcac
    19861 caagatacaa taaaacgaga atatcaagcg ataatctcgt tcactacgga gaataaggga
    19921 ttcgaaccct tgcgccagtt acccgaccta acgatttagc aaaccgtcct cttcagcctc
    19981 ttgagtaatt ctccatcaat ataa
//
LOCUS       DASFQS010000037        19650 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.037, whole genome shotgun sequence.
ACCESSION   DASFQS010000037 DASFQS010000000
VERSION     DASFQS010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 19650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19650
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.037"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(15..296)
                     /locus_tag="U1041_001091"
     CDS             complement(15..296)
                     /locus_tag="U1041_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEM4768204.1"
                     /translation="MRKVKMIASGRVQGVGFRWSVQFLAVEIGDIYGRVWNNDDGTVT
                     ILAQSDNAEKLSHFIHEIRKGPSRMAKVTYLDITLANFEDYKDFQVAYR"
     gene            427..1167
                     /locus_tag="U1041_001092"
     CDS             427..1167
                     /locus_tag="U1041_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEM4768205.1"
                     /translation="MEIIRSKANHLVKQVKKLQQKKYRTSSYLIEGWHLLEEALAAKV
                     PIEHILVSEEHVHRVAGLSNVTVVSSDIMQDLADSRTPQGVVAQLSLPNQTLPDVLTG
                     KFLVLEDVQDPGNVGTMIRTADAAGFDGVFLSDKSADIYNMKVLRSMQGSHFHLPVYR
                     MPMTAIFSALKSNQLQILATTLSSQSVDYKEVTPNPSFALVMGNEGQGISTFVADEAD
                     QLVHITMPGQAESLNVAIAAGILLFSFI"
     gene            1214..1696
                     /locus_tag="U1041_001093"
     CDS             1214..1696
                     /locus_tag="U1041_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM4768206.1"
                     /translation="MVAYKQDKEYMHYVGHLIATPKVQKLGKIPHHYYSTRLEHSINV
                     SYTSYKIAKKFGWDAKSTARGGLLHDLFFYDWRDTKFNKSHAWVHPRIAKRNAQKLIQ
                     LNKLEEDIIVKHMFGATIAPPRYKESWIVTCVDKYWAVREWSLPLQHKWKNRKVFRFQ
                     "
     gene            1718..2419
                     /locus_tag="U1041_001094"
     CDS             1718..2419
                     /locus_tag="U1041_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEM4768207.1"
                     /translation="MNNDSFIINQVDNTALNRFFGKIYGVVAMGIGLSALVSFLAVTV
                     FQSLLLSLLSAGSIIMMLIMIGQIALVVSASAMAAKNSPMALPMFLAYSVTNGITISM
                     ILMFYTSETVVLAFVSAALMFAIMAVIGMTTKKNLSGMAQALRAALWGIIIASVINIF
                     LRSSGLSFMMSIISVLVFSGLIAYDNQRIRNVFEQTSGNVGQGWVVSMALQLYLDFIN
                     LFLNLLRIFGGLSRD"
     gene            complement(2470..3801)
                     /gene="pepC"
                     /locus_tag="U1041_001095"
     CDS             complement(2470..3801)
                     /gene="pepC"
                     /locus_tag="U1041_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014607929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase C"
                     /protein_id="HEM4768208.1"
                     /translation="MSTLDFDFTERLYANYLANPSLQATENAVSHNGLLKSLETRQSA
                     IDNDYVFSIDLTKDAVSNQKASGRCWMFAALNTFRHKLISDFKLENFELSQAHTFFWD
                     KYEKSNWFLEQIIATADQEIGSRKVKFLLDTPQQDGGQWDMVVALFEKYGVVPKSVYP
                     ESISSSASRELNQYLNKLLRQDAQILRDLLAKGASPEEVQTQKENLLQEIFNFLAVNL
                     GLPPRSFDFAYRDKDNVYHRDTNVTPQAFYEKYVGLKLSDYVSIINAPTTDKPYNKSY
                     TVELLGNVVGAPAVRYLNVEMNRFKELAIAQLKAGESVWFGSDVGQSSNRQTGIMATN
                     TYDFSSGLGIHFHQDKAGRLDYSESLMTHAMVLTGVDLDDNEQPLKWKVENSWGDKVG
                     DKGYFVASDSWMDEYTYQIVVRKEFLTQEELAAYQAQPQVLAPWDPMGALA"
     gene            3935..5182
                     /locus_tag="U1041_001096"
     CDS             3935..5182
                     /locus_tag="U1041_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEM4768209.1"
                     /translation="MTKTPFVSKEVLETITEQFPTPFHLYDEKGIREKARALNAAFSW
                     NKGFKEYFAVKATPTPAILKILQEEGCGVDCATDVEVLMSEKLGFKDIMFTSNDTQAQ
                     EFVYARKVGATINLDAYEHIEFLKNVAGIPETVCLRYNPGGIFSLGTDIMDHPEESKF
                     GMTKEQLMKGYKELKELGVKEFGIHAFLASNTVTNDYYPVLARQLFELALEIREETGV
                     TLDFINLSGGIGVNYRPEQEPNDIAVIGKGVRKVYEEILTPAGMGHVKIFTELGRFML
                     APHGHLITKVLHRKETYRTYIGVDASAANLMRPAFYGAYHHITNITRPDAPIEVVDVV
                     GSLCENNDKFAVNRELPRAEVGDTLVIHDSGAHGFSMGYNYNGRLRSSEILLQEDGTA
                     RMIRRAETPEDYFATIYGFEFDK"
     gene            5285..5521
                     /locus_tag="U1041_001097"
     CDS             5285..5521
                     /locus_tag="U1041_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HEM4768210.1"
                     /translation="MDIGLAILLIVLAFAGGVALGIYLSRKQVENYIADKPILDENAL
                     RLMMSQMGQKPSEAKVQQVLRQIKSQQKVASKKK"
     gene            5611..6405
                     /gene="racE"
                     /locus_tag="U1041_001098"
     CDS             5611..6405
                     /gene="racE"
                     /locus_tag="U1041_001098"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002931399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEM4768211.1"
                     /translation="MDNRPIGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGP
                     RPAEQIREYTWQLVNFLLTKNVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGASA
                     AIKATQTGKVGVLGTAMTIQSDIYREKIQALSPETQVDSLACPKFAPLVESNSHQSSL
                     AKKVVYETLRPLVGKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLL
                     NYFQINRSRTEKDIQHRFYTTASPAAFKEIAESWMGIDIHVEHVEL"
     gene            6402..7412
                     /locus_tag="U1041_001099"
     CDS             6402..7412
                     /locus_tag="U1041_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-triphosphate diphosphatase"
                     /protein_id="HEM4768212.1"
                     /translation="MTDKIYEYRDEHNWFIGKASFANLFGSFGENGREQEIYQIGQLF
                     DKLIAGNYEDENFNQCVNIEVIKLQSDFALFQFACDVLNELNNRQFKVLQHQGAILVT
                     ENDKLLLVHLPQAGVSTADFFGQDKGLASVGDSILIATKNEGKTKEFRKFFERFGYQV
                     ENLNNYPDLPDVAETGMTFEENARLKAETIAELTGKMVLADDSGLKVDALGGLPGVWS
                     ARFSGPDATDELNNAKLLHELAMVFDLKNRSAQFHCTLVMAAPNRDSLVVEADWEGFI
                     GMDLRGENGFGYDPLFLVGETGKTSAELTLEEKNKISHRAQALEKLVEAFPIWQEQAK
                     QS"
     gene            7385..7912
                     /locus_tag="U1041_001100"
     CDS             7385..7912
                     /locus_tag="U1041_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM4768213.1"
                     /translation="MAGASKTILVMSDSHGDRQIVEEIKNHFLGKVDAIFHNGDSELD
                     SQDSLWDGIQVVNGNCDYFGGYPDQLITQLDGVTIAQTHGHLYGINYGWQRLDYWAQE
                     VDADICLYGHLHVPDAEVRGKTLFLNPGSVSQPRGLVRECLYALVTIYDDHFHVDYYN
                     RQHQLYPALTKDISR"
     gene            7909..8367
                     /locus_tag="U1041_001101"
     CDS             7909..8367
                     /locus_tag="U1041_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM4768214.1"
                     /translation="MIAREFEAFLLDQEETFLTPADKLAVIIDTHNIDHAKLLLSHMT
                     YSRVPVVTEDGRFFGTIGLTEIIKYQAEHELSDDELNTDISLIAKTDEETVGLDYDLT
                     EVMRKLVDQSFLPVLGENREFLGIITRKSILKAINALLHNFPLASKEGKK"
     gene            8364..9095
                     /gene="xerD"
                     /locus_tag="U1041_001102"
     CDS             8364..9095
                     /gene="xerD"
                     /locus_tag="U1041_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEM4768215.1"
                     /translation="MKQAIGEFIQTKKVSVNSQKSYTYDLQQFVELTKGDIDQQSLLL
                     YQQSLLDLKPAAQRRKLSTVNQFLYFLYERGHLDRFYKLQAMAGPARVKKKLESEDLS
                     LLFQESPWLEGQLIALLIAYLGLTPSEIAELTSQQVNLDFQVLTVEKGVTKRVLSIPK
                     ELVGYLEGHLTGQYVFDKKGQNYSRQWFFNRLTEFVQSIGKSDWTAQKLREQYILAQI
                     REGKSLDQIAKQLGLKTSMSLEKFR"
     gene            9095..9814
                     /locus_tag="U1041_001103"
     CDS             9095..9814
                     /locus_tag="U1041_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEM4768216.1"
                     /translation="MDIKLKDFEGPLDLLLHLVSKYQMDIYEVPITEVIEQYLAYIAT
                     LQAMRLEVAGEYMVMASQLMVIKSRRLLPKVVEQTDPEDDPEMDLLDQLEEYRKFKLL
                     SEKLGEQHDERANYFSKPKLDLIYDDVQLAKDKTVIDIFLAFSKVMAEKQASLRQSHA
                     TIARDEYKIEDMMDLVRSRFQVAPRIELRQLFQESQDINEVITIFLATLELVKVHEII
                     LEQKETFGDIYLVRSEDESLS"
     gene            9798..10367
                     /locus_tag="U1041_001104"
     CDS             9798..10367
                     /locus_tag="U1041_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein B"
                     /protein_id="HEM4768217.1"
                     /translation="MNRLAEIEVLLFVAGEDGLSLRNLAEMLELQPTAVSQQLEKLSE
                     KYMADQASGLALLESSNRYKLVTKKEYANLLRIYAKTPINQTMSRALLETLSIVAYKQ
                     PITRIEVDDIRGVNSSGAISKLQAFDLIRENGKKEVLGRPNLYVTTDYFLDYMGINSL
                     EELPDVSELDLVEQETELFLERNELEDEN"
     gene            10357..11091
                     /locus_tag="U1041_001105"
     CDS             10357..11091
                     /locus_tag="U1041_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM4768218.1"
                     /translation="MRINKYIAHAGVASRRKAEELIKQGRVTVNGQVVRELATTIKSG
                     DIVEVEGQPIYNEEKVYYLLHKPKGVISSVSDDKGRKTVVDLLPTVKERIYPVGRLDW
                     DTSGVLILTNDGDFTDKMIHPRNEIDKVYLARVKGIANKEVLRPLTRGVVIDGKKTKP
                     AVYEIIKVDPVKNRSVVELTIHEGRNHQVKKMFEAVGLQVDQLSRTRFGNLDLTGLRP
                     GEYRKLNKKDISKLHTLAVTKPVKKK"
     gene            11088..11327
                     /gene="yidD"
                     /locus_tag="U1041_001106"
     CDS             11088..11327
                     /gene="yidD"
                     /locus_tag="U1041_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002272085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEM4768219.1"
                     /translation="MTKLLIGLVRFYQKCISPLFPPSCRYRPTCSSYMIEALQKHGIK
                     GFLMGLARIGRCHPFVEGGEDPVPDRFSLKRNKQK"
     gene            11824..13599
                     /locus_tag="U1041_001107"
     CDS             11824..13599
                     /locus_tag="U1041_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4768220.1"
                     /translation="MKRMKNIALTGIGLLSIATLTACQTKEKTSDVALTFKSEVTHEG
                     QTIEGGSLKYALVASAPSTGILIDELSQTAVDSTFAGMVDISMFGYDSARTLDDSGLA
                     KAEFDVDAKTVTVSLTGKDYKWSDGEAFTIDDYIFTIEQLASPDYTGVRADTTYTNII
                     GFEEFQAGTASEISGVKKVDDYTVVLSVKDMSPSMMYAGGGVPYLVMPKHIFKDIAVK
                     DWESSEYSRTAKVVGMGPYKVKEIVNGESVTYVPNEYYFKGKVKLDSYRIDIVSPDTI
                     VAEMRAGNYDIADMPTDQYESYKDLSNITLLGSLDGIYNYIGFNLGKYDDASGKNVTN
                     PNAKMNNVKLRQAMGYALDNAVIGEKLYNGLYHPTNSLIISFFGDVHDSELAGYSYNP
                     EKAKKLLDEAGYKDVDGDGMREDAEGKSLTISVAAQKSTETQETMVQQYLTWWKEIGL
                     NVELYTGRTIEYNTFYESIAANDEGIDVYLAAWIAGLDPDPTSLWGPEAMYNYTRFVS
                     DENTALLNKITSAESFDEQKNIENYKAWQEYAFEQAFAIPTFERESITAVNKSVKYYD
                     VYIGSDSKSGHENLELTAEKGIAAE"
     gene            13986..14531
                     /locus_tag="U1041_001108"
     CDS             13986..14531
                     /locus_tag="U1041_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEM4768221.1"
                     /translation="MNIETLEYIEEIAKNHIVLFEPQIPQNTGNIARTCAATNSPLHI
                     IKPMGFPIDDRKMKRAGLDYWDKLDVRFYDNLAEFMDYASKQGRVHLVSKFADKTYSD
                     EDYNDGNIHYFLFGREDKGLPEDFMREHPEKAIRIPMNDEHVRSLNVSNTACMIVYEA
                     LRQQQFVGLDLVHTYDGDKLK"
     regulatory      14581..14917
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            14977..15534
                     /locus_tag="U1041_001109"
     CDS             14977..15534
                     /locus_tag="U1041_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4768222.1"
                     /translation="MTNTRKMTIIAILSAVSFLLMYLKFPLIPTASFLEVDFSLVPIL
                     FGLLVLDMKSSFAILLVRTFLKLILNNQGPSTIIGLPMNIAAMSVFILAVAYFWKNDQ
                     ALKNYLKAATIATIGSTAVMLVLNYVYAVPVYAAFANFDIKEILGLTNYLLMMVLPFN
                     LLQGIVLSAIFYICYKAAQPILKKV"
     gene            15559..16212
                     /locus_tag="U1041_001110"
     CDS             15559..16212
                     /locus_tag="U1041_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEM4768223.1"
                     /translation="MKNKQIHLRNASFFALAFVILGYVVKFYPSTLAGFDSTVQSAIR
                     GNLPSGASQFWTSITVLGNTVIILAITLILATIFYYYKKWRIEAYFLLASFAAMGVAS
                     TALKYVYQRPRPSIEWLIDTIGYSFPSWHTASTMMIAGAVVIIVHQRMKKGIARLVLQ
                     AMLILLAVLVAVSRIYIGVHYPTDIIGGWLLAVTLLQMMYPFYDQKRFEWRFQSKQK"
     gene            complement(16420..18219)
                     /locus_tag="U1041_001111"
     CDS             complement(16420..18219)
                     /locus_tag="U1041_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEM4768224.1"
                     /translation="MKIKWLSVIRVIGLVFVLLYHFFIKYFPGGFVGVDLFFTLSGYL
                     TTALLIDEFAKHKKIDIVSFFRRRFYRILPPLVLTILLVLPLALLVRNDFIANIGNQI
                     AAALGFMTNFFEILSGGSYENQFSPHLFVHTWTLAIEVQYYLVWAGLVWYLTRISKSV
                     GQLRGSIFLTSISLFSLSFLAMSISSFFVDNFSTIYYSSFTHTFPFFLGSILATIAGI
                     GNTTTAFQQQVNTLTIKQTIGLFLGGLGVELLLLFTLQFSSIWTYLIGFLLSSLATAT
                     MIFAARVLHEKTEDVKEPAIILFFASISYDIYLFHWPLLIIFTQLTNATIAAGLSFVF
                     STILSTISFYILEPYIAGKVGSLFGLPIDLKPYKKWLLGSFACLTIVGLGICLFAPKL
                     GSFEQESMVSNLYQAQTQLNTTRSAAENAKATSFEIQKGVIIFGDSVTVRASAAIQTA
                     LPDAQIDGTVSRNLSEIANLINLYKQNNSLKETVVVALGTNTTDNYQELLDQLVKDFP
                     KGRRLIFVTPYDGNFPPSESISYQTGQYEKELAEKYDYISIADWYQAAKDNPPIWYNT
                     DLVHFNLESNGGEVFAQTIKNAVEAVTDGPIKN"
     gene            complement(18209..18631)
                     /locus_tag="U1041_001112"
     CDS             complement(18209..18631)
                     /locus_tag="U1041_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768225.1"
                     /translation="MKEFKLPSIKWHDITSHFTRPKLEILSLIIILICALSVFTGRIA
                     SKRAMTFNNGALQYNGYVVANKMNGQGKLTFDNGDVYEGQFTNGIFHGQGTYTSASGW
                     VYTGQFKNGYADGKGKLTTEGQAIYEGTFKQGIYQYEN"
     gene            complement(18763..19197)
                     /locus_tag="U1041_001113"
     CDS             complement(18763..19197)
                     /locus_tag="U1041_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEM4768226.1"
                     /translation="MKKIVFVCLGNICRSPMAEFVMKDLTNQFHIESRATSNWEHGNP
                     IYPGTQKIFQKHKIPYDKTKTSQQISQADFEEFDVIIGMDSNNVRDLQKMAPAHAQNK
                     IFQFAEKSVPDPWYTGDFDETYEMVKKGCQNWLDRLQSFDQE"
     gene            complement(19367..19579)
                     /locus_tag="U1041_001114"
     CDS             complement(19367..19579)
                     /locus_tag="U1041_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEM4768227.1"
                     /translation="MSEEKFDAKLEQLSGSAKEVIGKLTGDKEIEVEGLVEKGIGKAK
                     ELVEDAKDGLEGAINGIKNAFDKEEK"
BASE COUNT         5740 a         3732 c         4376 g         5802 t
ORIGIN      
        1 aaaatataca agttttatct atacgccacc tgaaaatcct tatagtcttc gaagttggct
       61 agggtgatat ctagataggt aactttggcc atacgagaag gccctttccg aatttcatgg
      121 ataaaatggc tgagcttctc agcattatct gactgagcta aaatggtgac agtcccatca
      181 tcattattcc aaactctgcc gtagatgtcg cctatttcca cagctaaaaa ttgaacagac
      241 caacgaaagc cgactccttg cacacgacca gatgcaatca tttttacctt tcgcataagt
      301 ttctcctttt gacaagacat ttactttatt atatcatggt tgggtaagac tgttcaaaaa
      361 tcaagataat tgatttagcc gttggaaaat tgaagttgct gagcagtaaa agaaaaaggg
      421 gcattcatgg agatcattcg ctcaaaggcc aatcatttgg tcaagcaggt taagaaatta
      481 caacagaaaa aataccgtac ttcttcttat ttgattgaag gttggcattt gttggaggag
      541 gctttggcag ccaaagtacc tattgaacat atcttggtat cagaagaaca tgttcatcgg
      601 gttgctggct tatccaatgt aacagttgtc agttcagata ttatgcagga cttggcagac
      661 tcacggacac cgcaaggggt agtagctcaa ctttccttac caaatcagac cttacccgat
      721 gtcttaacag gaaaattttt ggttctggag gatgtgcagg accctggaaa tgttggtacc
      781 atgattcgta cagctgatgc agctggtttt gatggagtat ttctatcgga taagtcggca
      841 gatatttaca atatgaaggt tctgcgttcc atgcaaggga gtcatttcca cttgccagtt
      901 tatcggatgc cgatgactgc tattttttct gctttgaaaa gcaatcagct acaaatcttg
      961 gcaacaaccc tctctagtca gtcggttgac tataaggaag ttacgccaaa tccgagtttt
     1021 gccttggtca tgggaaatga aggtcaagga atttcaactt ttgtagccga tgaggcggat
     1081 caacttgtcc atattaccat gccagggcag gcggaaagcc tcaatgtagc aattgcggcg
     1141 ggtattctat tgtttagctt tatttaagcc aattgtacta tagtgtggta taatattcca
     1201 acgaggttaa cgaatggttg catataaaca agataaagaa tacatgcatt acgtggggca
     1261 cttgattgcc acacccaagg tgcaaaaatt ggggaaaatt cctcatcatt attactccac
     1321 gcgcttggaa cattccatca atgtctctta tacaagctat aagattgcga aaaaatttgg
     1381 ttgggatgct aagtcaacag ctcgtggtgg tctattgcat gatttattct tctatgactg
     1441 gagagatacc aaatttaaca agagccatgc ttgggttcat ccacgaattg ctaaacgcaa
     1501 tgctcagaaa ctcattcaac tcaataaact agaagaagac atcattgtga agcatatgtt
     1561 tggtgcgaca atcgctcctc ctcgctacaa ggaatcctgg attgtgacat gtgtggataa
     1621 gtattgggct gtgagagagt ggagtctgcc cttacaacac aagtggaaaa atcgtaaggt
     1681 ctttcggttt caataagatg atttaaagga gaatagtatg aataacgatt catttattat
     1741 taatcaggtg gataataccg ccctcaaccg tttcttcggt aaaatttatg gtgtggttgc
     1801 catgggaatt ggtctgtcag ctctagtttc tttcttggct gtgaccgtct ttcaatcttt
     1861 attgcttagt ctgctgagtg caggctccat catcatgatg ctgattatga ttggtcagat
     1921 tgccttggtt gtttctgctt cagcaatggc agctaaaaat agcccaatgg ctctaccaat
     1981 gtttcttgcc tactcagtaa caaatgggat taccatcagt atgatcttga tgttctatac
     2041 cagcgaaaca gttgttcttg cctttgtgtc agcggctctt atgtttgcta tcatggctgt
     2101 aattgggatg acaacgaaga agaatctttc tggtatggct caggcattgc gtgcagctct
     2161 atggggaatt attattgcaa gtgttattaa tatcttcctt cgtagctctg gtctaagctt
     2221 tatgatgtct atcatttctg ttttggtatt ctcaggtttg attgcttatg acaaccaacg
     2281 tatccgcaat gttttcgaac aaactagtgg taatgttggc cagggttggg tcgtatccat
     2341 ggcgcttcag ctctatcttg acttcatcaa cctcttcctc aatctactcc gtatctttgg
     2401 tggtttgagt agagactaat tatgacatat aaaaaaagag ggttgccctc tttttttata
     2461 tgtcgtttgt tatgctagag ctcccattgg atcccatgga gcaaggactt gtggttgagc
     2521 ttgataagct gctagttctt cttgtgtgag gaattctttt cggacaacaa tctgataagt
     2581 gtactcgtcc atccagctat ctgatgcgac gaagtatccc ttgtcaccaa ccttgtcacc
     2641 ccaagagttt tccactttcc atttgagagg ttgctcattg tcatctaaat caacaccagt
     2701 taagaccata gcgtgggtca tcaagctctc ggagtagtct aatcttccag ccttgtcttg
     2761 atggaaatgg atacccagac ctgaagagaa gtcgtaggtg ttggttgcca taataccagt
     2821 ttgacgattg ctactttgac cgacatcgga accaaaccaa acggactcac cagctttgag
     2881 ttgggcaata gctagttctt taaaacggtt catttctaca ttgaggtagc ggacagcagg
     2941 ggcaccaaca acgttcccca acaattcgac tgtataagat ttattgtagg gtttgtcagt
     3001 tgtaggagca ttgataatgg agacatagtc agatagtttc aaaccaacgt atttctcgta
     3061 gaatgcctga ggtgtcacat ttgtatcgcg gtgataaaca ttgtctttat ctctatatgc
     3121 aaaatcaaag ctgcgtggag ggagtccaag gttgacggct aggaagttaa agatttcttg
     3181 aagtaagttt tctttttgtg tttgaacctc ttccggagaa gctccttttg caaggaggtc
     3241 acgcaagatt tgtgcatctt gacggagcaa tttgttaagg tactgattga gctcacggct
     3301 ggcactggat gagatagatt ctggatagac ggatttcggt accacaccat atttttcaaa
     3361 taaggcaaca accatatccc attgaccgcc atcttgttga ggagtatcca ataagaattt
     3421 taccttacgg ctaccaattt cttggtcagc tgtggcaatg atttgttcga ggaaccagtt
     3481 ggacttttca tacttatccc aaaagaaggt atgggcctgt gatagctcaa aattctccag
     3541 tttgaagtca gagatgagtt tgtggcggaa ggtgtttaat gcagcaaaca tccagcaacg
     3601 tccagaagcc ttttggtttg aaacagcgtc ctttgtcaag tcaattgaaa agacatagtc
     3661 attgtcgatg gcgctttggc gtgtttctaa ggatttcaaa agtccgttgt ggctaacggc
     3721 attttcggtt gcctgtaggc ttggattagc tagatagttg gcatacaagc gttctgtaaa
     3781 atcaaaatct agtgttgaca tatattactc cttttttaat gataatcaca ttatagcgct
     3841 cataatttat tttgcaagta tttggtggag ttgaaagcta cagttcctca catatttgtg
     3901 atataataag aaaaatattt gatgaggtag agatatgacc aagacaccat ttgttagtaa
     3961 agaagtttta gaaaccatta cggagcaatt tccgactcct tttcatttgt atgatgaaaa
     4021 aggcattcgc gagaaggcgc gtgcccttaa tgcagctttt tcatggaaca aaggctttaa
     4081 ggaatatttt gcggtcaaag cgactccaac tccagctatt ttaaaaattc ttcaagaaga
     4141 aggttgtgga gtggattgtg ccaccgatgt ggaagtgctg atgagtgaaa aattgggctt
     4201 caaggacatc atgtttacat ccaatgatac ccaagcgcaa gaatttgtct acgcgcgaaa
     4261 agttggggcg accattaacc tggatgccta tgagcacata gaatttttga aaaacgtagc
     4321 tggcattcca gaaacggtct gcctgcgtta taatccaggt ggtatattct cactgggaac
     4381 ggatattatg gaccatcctg aagagtctaa gtttgggatg accaaggaac agttgatgaa
     4441 gggctacaag gagttaaaag aacttggtgt caaggaattt ggtattcatg cctttctagc
     4501 ttcgaataca gtaacaaatg actactatcc tgtcttagct cgtcaactct ttgaattagc
     4561 cttggaaatt cgtgaggaaa caggtgtgac cttggacttc atcaacctat caggtgggat
     4621 tggggtcaac tatcgtcctg agcaagaacc aaacgacatt gctgtcattg gtaagggtgt
     4681 ccgtaaggtt tacgaggaaa ttctcacgcc agctggtatg gggcatgtca aaatctttac
     4741 agaattgggt cgctttatgt tggcgccaca cggtcacttg attacaaagg tgctccatcg
     4801 taaggaaact tatcggacct atatcggtgt ggatgcttcg gctgccaatc ttatgcgtcc
     4861 agccttctat ggcgcctacc accatatcac taatatcacg cgcccagatg cgccaatcga
     4921 agtggtggat gtggtaggtt ccctctgtga aaacaacgac aagtttgcgg ttaatcgtga
     4981 attaccacgg gcagaagtag gagatacctt ggtcattcat gacagtgggg cccacggctt
     5041 ctccatgggc tacaactata atggtcgctt gcgttcgtct gaaattcttt tacaggaaga
     5101 tggcacagct cgtatgattc gtcgtgctga aacacctgag gattatttcg caaccattta
     5161 cggttttgaa tttgacaagt aagtcttgga aaagcttgct aaatttggta taatagattc
     5221 attaagagat tgtcgcagga caattccgaa tgaattattt ttagaagagt caggagattg
     5281 acagatggat atcggtttag ctattttatt gattgtattg gcatttgcag gtggtgtagc
     5341 cttggggatt tacttgtctc gcaaacaagt tgaaaactac attgctgaca aaccaatttt
     5401 ggatgagaat gctttgcgtt tgatgatgag ccaaatgggt caaaagccaa gcgaagcaaa
     5461 agtacaacaa gtacttcgcc aaatcaagag ccaacaaaaa gtggcaagca agaaaaaata
     5521 atcaaactgg gactgggata ttcattccca gatcccattt tttgagtaga aaagaaaggc
     5581 tagtcagatt ttctggctat tctcaatgtt atggataatc gaccaatagg ttttttagat
     5641 tcaggtgttg ggggattaac ggttgcgcgt gagttaatgc gccagcttcc ccatgaagaa
     5701 atcgtttata taggggactc ggcacgggca ccttatggac cacgtccagc ggaacaaatc
     5761 agagaatata cttggcagtt ggtcaatttc cttttgacaa aaaatgtaaa aatgattgtc
     5821 tttgcctgca atacggcaac agcggtagcc tgggaagaag tcaaggaaaa gttggatatt
     5881 cctgttttgg gagtgatttt accaggtgct tcggcagcta ttaaggcaac gcaaactggt
     5941 aaggtgggtg tcttaggaac ggctatgacc attcaatccg atatctatcg tgaaaaaatt
     6001 caggctcttt ctccggaaac gcaggtagac agtttggcct gtcccaaatt tgcaccactg
     6061 gttgagtcca atagccacca atccagtctt gccaaaaagg ttgtttatga gacacttcga
     6121 ccacttgttg ggaaagtgga cactttggtt ttgggctgca cccattatcc cctacttcgc
     6181 cctatcatcc agaatgccat gggcaaggat gtcaagctga ttgacagtgg ggcagagtgc
     6241 gcgcgagata tttctgtttt attaaattat tttcaaatca accgtagccg taccgaaaag
     6301 gatattcagc acagatttta cacaacagct agtccggcag cttttaaaga aatagctgaa
     6361 agctggatgg gcattgatat tcatgtggag catgtagaac tatgacagac aagatttacg
     6421 aatacagaga tgagcacaat tggtttatcg gaaaagctag ctttgccaat ctatttggtt
     6481 catttggtga aaatggcaga gagcaggaaa tttaccagat tggtcaattg tttgacaaac
     6541 taattgctgg taattatgaa gatgagaatt ttaaccagtg tgtcaacatt gaagtgatca
     6601 aacttcagtc ggactttgcc ctcttccaat tcgcctgtga tgttttgaat gagttaaaca
     6661 atcgccagtt caaagttctc caacaccaag gggctattct ggtaacagag aacgacaaac
     6721 tgctcttagt ccatctgccc caagcaggag ttagcacggc agatttcttc ggtcaagaca
     6781 agggattggc aagcgtggga gatagcatct tgattgccac taaaaatgaa ggtaagacca
     6841 aggaattccg taagtttttt gagcggtttg gttaccaggt cgagaacctc aacaactacc
     6901 ctgacctgcc agatgtggct gaaactggga tgacttttga ggaaaacgca cggcttaagg
     6961 ctgaaaccat agcagagctg acaggcaaga tggtcttggc tgatgattca ggtttgaagg
     7021 ttgatgcgct tggcggactg ccaggggtct ggtctgctcg tttttcaggt ccagatgcca
     7081 cagacgagct caataatgcc aagctcttgc atgagttggc tatggtcttc gacttgaaaa
     7141 atcgttctgc tcagttccac tgcaccctag ttatggctgc tccaaatcgt gatagtttgg
     7201 ttgtcgaagc tgactgggaa ggctttatcg gtatggacct ccgtggggaa aatgggtttg
     7261 gatatgatcc acttttcctc gtaggtgaaa caggtaagac ctcggcagaa ttaaccctag
     7321 aagaaaaaaa taagatttcc caccgtgcac aagcactaga aaaattagtg gaggcatttc
     7381 caatatggca ggagcaagca aaacaatcct agtcatgagt gattctcatg gggacagaca
     7441 gattgtagaa gagattaaaa accactttct tggcaaggtc gatgccatct ttcacaatgg
     7501 tgattcggag ctggacagtc aagatagtct atgggatggc atccaagtgg taaatggcaa
     7561 ctgcgactac tttggtggct accctgacca gctcattact caattggatg gtgtgactat
     7621 cgctcagact catggtcatc tttatggcat taattacggc tggcaacggt tggattattg
     7681 ggcacaggaa gtggatgcgg atatttgttt gtatgggcat ctgcatgtgc ctgatgcgga
     7741 agtgcgtggc aagaccctct tcctcaatcc tggctccgtt agtcaacctc gtggtttggt
     7801 cagagaatgt ctctatgctc ttgtgaccat ctatgatgat catttccatg tggattacta
     7861 caatcgacag caccaacttt acccagcatt gacaaaggat atttcaagat gattgcacga
     7921 gaatttgaag cctttttatt ggaccaggaa gaaactttct tgacaccagc agataaattg
     7981 gctgttatta tcgataccca taatattgat catgctaaat tgttgctcag tcacatgacc
     8041 tattctcgtg tgcctgtagt aacagaagac ggtcgtttct ttgggaccat tggcttgacg
     8101 gaaattatta aataccaggc tgagcatgag ttgtcagacg atgaattgaa cacggatatt
     8161 tccctgattg caaagacgga tgaagaaacg gtaggtctgg attatgattt gacagaggtc
     8221 atgcgcaagc tcgtcgacca atccttccta ccagttcttg gagaaaacag ggaatttctg
     8281 gggattatta cccgtaaatc tattctgaaa gctatcaatg cccttctgca taattttccc
     8341 ttggcatcaa aagaaggcaa gaaatgaagc aggctatagg agagtttatc cagactaaaa
     8401 aggtcagtgt caacagtcaa aaatcctata cctatgacct acagcaattt gtggagttga
     8461 ccaagggcga catagatcag cagtcactct tgctctatca gcagtccctg ctagacttga
     8521 aacctgctgc tcagagaaga aagctatcga ccgtcaatca atttctctat tttctttatg
     8581 aaagaggtca cttggacagg ttttacaagc tacaggctat ggcaggaccg gctcgtgtca
     8641 aaaagaagtt ggaaagcgaa gacctgtctt tactctttca agaaagtcct tggctagaag
     8701 gtcagctcat cgcacttttg atagcctatt taggcttgac acctagtgaa atagcagagc
     8761 tgaccagcca gcaggttaat ttggattttc aagttctgac agttgagaaa ggtgtgacca
     8821 agcgtgttct gtccattccc aaggaattag ttggctacct tgaagggcat ctgacagggc
     8881 aatatgtctt tgacaagaaa ggtcagaact attctcgtca gtggtttttc aatcgcttga
     8941 ccgaatttgt tcaatccatt gggaagtcgg attggactgc tcaaaaattg cgagagcagt
     9001 atattctagc tcaaatcaga gaaggaaaat ccctggacca aatcgctaag cagttgggac
     9061 taaaaacaag catgagtttg gaaaaattta gataatggat ataaaattaa aagattttga
     9121 aggacccttg gatctcttac tgcatctggt atccaagtac caaatggata tttacgaggt
     9181 tccaattaca gaggtcattg aacaatacct ggcctatatt gcgaccttgc aagccatgcg
     9241 cttggaggtg gcgggagagt atatggtcat ggccagtcaa ttgatggtca ttaaaagcag
     9301 gaggctcttg ccaaaagtcg ttgaacagac agaccctgag gatgacccag aaatggacct
     9361 cttggatcaa ttggaagaat accgcaagtt caagctactc agcgaaaaac tgggagagca
     9421 gcatgatgaa cgggccaatt atttttcaaa acccaaatta gatttgattt atgatgatgt
     9481 tcagctggcc aaggataaga ctgtcatcga tattttcctt gccttttcta aggtcatggc
     9541 tgaaaaacaa gccagtcttc gtcagtcaca tgcaaccatt gctcgggatg agtataaaat
     9601 cgaagacatg atggaccttg tccgcagtcg tttccaagtt gctccccgca ttgaactgcg
     9661 tcagcttttt caggagagcc aggatatcaa tgaagtgatt accatatttc ttgccacctt
     9721 ggagttggtt aaggttcatg agattatctt ggaacaaaag gaaacctttg gagatattta
     9781 tctagtaagg agtgaagatg aatcgcttag ctgaaatcga agtcctgctt tttgtggcag
     9841 gtgaggatgg cttgagttta cgcaatttgg ctgaaatgtt ggaattgcag cccacagctg
     9901 tcagccagca attagaaaaa ctcagtgaga aatacatggc cgaccaggca tcaggcttgg
     9961 ctctcttaga atcctccaat cgctataaat tggttaccaa aaaagaatat gcaaaccttc
    10021 tgcgtatcta tgccaaaaca ccaatcaatc agaccatgtc gcgagccctt ttagaaacct
    10081 tgtcaatcgt agcctataag caacccatta ctcggattga agttgatgat attcgcggag
    10141 ttaattccag cggtgccatc agtaaattgc aggcttttga cctcattcgt gagaatggga
    10201 agaaagaggt acttggcaga cctaatcttt atgtcacaac ggattatttt ctggattaca
    10261 tggggattaa cagtctagaa gaattgcctg atgtatcaga acttgacttg gtggagcaag
    10321 aaaccgagct attcctagaa agaaatgagt tagaagatga gaattaacaa atacattgcc
    10381 cacgctggtg tagccagtcg tcgtaaggca gaagaattga ttaagcaagg tcgtgttacc
    10441 gtcaatggtc aagttgtccg tgagttggca acgactatta agtctggtga tattgtggaa
    10501 gtggaaggcc agccgattta caacgaggag aaagtgtatt acctactcca taagccaaaa
    10561 ggtgttattt ccagtgtgtc agacgacaag ggaagaaaga cggttgtgga tttgttgcca
    10621 acggtcaaag aacggattta tcctgttggt cgtttggact gggatacttc aggtgtcctg
    10681 attttgacca atgacggtga ttttacggat aagatgattc accctcgaaa tgagattgac
    10741 aaggtctatt tggcgcgtgt caagggtatt gccaataagg aagtactccg tcccttgacc
    10801 cgaggtgtcg tcattgatgg caagaaaacc aagcctgccg tttacgaaat tatcaaggta
    10861 gaccctgtta aaaatcgctc tgtggtcgag ttgaccattc atgaagggcg taatcatcag
    10921 gttaagaaga tgtttgaagc tgttggtctg caggtggacc aactttctcg tacccgcttt
    10981 gggaatttgg acttaactgg tttgcgtcca ggagaatacc gaaagctcaa taagaaagac
    11041 atcagcaaac tgcatacact agcagttaca aaaccggtga agaaaaaatg accaagctcc
    11101 ttataggctt agtcaggttt taccagaaat gcatttctcc cctttttccg ccctcttgtc
    11161 gctaccgtcc gacttgttca agttacatga tagaggcctt acagaaacat ggaatcaagg
    11221 gatttttgat gggtttggct cgaattggtc gctgtcatcc ctttgtggaa ggtggggaag
    11281 atcctgtgcc ggacaggttt agtttgaaaa gaaataagca gaagtagggc aacctacttt
    11341 ttgttttgta taaatatagg tttttaggtt gcctttagta ctctctcaaa aggtttgggg
    11401 aaccttttaa ggctggagat agggcgaagc aagttcgcct caatattaac agtccactgg
    11461 actgttatag ccaatcaatc actgcgctca gatgttgaca cgaacgctga gaagcgaggt
    11521 tggtcttttt gcccagcctc cgctcgtcga aggaatcaaa gataaaccaa atgactctcc
    11581 gttttgttac agacaagact atacttatcc gagttcattg agtattgggc ttagtggact
    11641 atcataaaaa acgaagaagc agtagtggct gaagaggtac tcttttttac ctctattcgc
    11701 tgctattttt agttaaaatg gaaaaaagtg agaatactca aaggcgaaca ttgttggtaa
    11761 gatagttgca tatttatgct aaatcgtgct atactattca aaataaataa atggggtagg
    11821 gatatgaaaa gaatgaaaaa catcgcttta actggtatcg gtctgctttc tattgcaacg
    11881 ttaacagctt gtcaaactaa agaaaagacg agcgatgttg ctctgacatt taaatcagaa
    11941 gtgacacacg aaggacaaac tattgaaggc ggaagtctca aatatgcctt ggtagcttcg
    12001 gcgccttcga ccggtatctt aattgatgaa ttatcgcaga cggcggtaga ctcaaccttt
    12061 gcaggcatgg ttgatatttc tatgtttgga tatgattcag ctcggacgtt agacgattca
    12121 ggccttgcta aggcagagtt tgatgtagac gcaaagacag ttaccgttag tttgacaggc
    12181 aaggactata agtggtccga tggggaagcc ttcaccatcg atgattatat tttcacaatc
    12241 gaacaactag ctagtccaga ctatacaggg gttcgtgcag atactaccta tacaaatatc
    12301 attggctttg aagaatttca ggctggaaca gcaagtgaaa tttcaggtgt taagaaggtt
    12361 gatgattata cggtagtcct ctcagtgaaa gacatgtctc catccatgat gtatgctggt
    12421 ggtggagtac cttatttagt catgccgaaa cacattttta aagacattgc agtcaaagat
    12481 tgggaatcaa gtgagtattc tcgtacggca aaagttgtcg gtatgggtcc ttataaggtc
    12541 aaggaaattg tcaatggcga gtcggtgacc tatgtaccaa atgagtacta ctttaaaggg
    12601 aaagttaagc tagatagtta caggattgat attgtttcac cagatacgat tgttgcagaa
    12661 atgagagcag gcaattatga tattgctgat atgccaacag accagtacga atcttacaag
    12721 gacttatcaa atattacttt gctaggtagt ctggatggta tttacaatta tattggcttt
    12781 aatcttggta agtacgatga tgctagtggt aagaatgtga ccaatcctaa tgctaagatg
    12841 aataatgtta aattgcgtca agcaatggga tatgcgttgg acaatgcggt gattggagag
    12901 aaattatata acggcttgta tcacccgaca aactcactaa ttatctcttt ctttggagat
    12961 gttcacgatt cagaactagc tggctatagt tataatcctg aaaaggctaa aaaacttctc
    13021 gatgaggcag gatataaaga cgtagatgga gacggtatgc gtgaagatgc tgaaggaaaa
    13081 tcgcttacca tcagtgttgc agcacagaaa tcaaccgaaa cgcaagaaac catggtacag
    13141 caatacctta catggtggaa agaaattggt ttgaatgtgg aactctatac aggaagaact
    13201 attgagtaca atactttcta tgaatcaatt gctgccaatg atgaggggat tgatgtctat
    13261 cttgctgctt ggattgccgg cctagatcca gacccgacat cattgtgggg acctgaagcg
    13321 atgtacaact atactcgctt cgtttcagat gaaaacacag cacttttaaa taaaattacc
    13381 tctgctgagt catttgacga acaaaaaaat attgaaaact acaaagcttg gcaagaatat
    13441 gccttcgaac aagcctttgc aattccaacc tttgaacgtg aaagtattac tgccgttaac
    13501 aaaagcgtta aatattacga cgtttatatc ggttcggaca gtaaatcagg acatgaaaat
    13561 cttgagttga ctgcggaaaa agggattgca gcagaataaa tgtaagaaag gggagtttat
    13621 ttgctctcct ttttcatttt ctatgaaaat ttgaaaaaaa tgtggcaaaa ctcttgcttt
    13681 tcagccttct ttaagctaca atagtatcac gatttcattg atttaactca aacctgttgt
    13741 gagttaagtg aatgaatcat cattcaccat gctgtttgct gagcttgact ccgggcagtg
    13801 tggctatttt tttgtctttc ttgccatagg agacagtcga gtctttttac tcaatgaaaa
    13861 tcaaaaaaag aaactagaca acaagcagca gactgtattg gtatacggta aaatgcagct
    13921 gacatggttt ggatttgatt ttcgagggta ttcgtgttta gtgaaatgtc accagagagg
    13981 ttcttatgaa tattgaaaca ttagagtata tagaagaaat agccaaaaac cacattgtct
    14041 tatttgaacc acagattcca cagaatacag gcaatattgc tcgaacttgt gctgcaacca
    14101 atagtcctct ccatatcatt aagcctatgg gatttccaat tgatgaccgt aagatgaaac
    14161 gtgcaggact agattattgg gataagttag atgttcgctt ctatgacaat ttagcagaat
    14221 ttatggatta tgccagcaaa caaggacgcg ttcacttagt atctaaattt gctgataaaa
    14281 cctattcgga tgaagactat aatgatggga acattcatta tttcttattt ggccgtgaag
    14341 ataagggctt gccagaagat tttatgcgtg aacatccaga gaaggctatc cgtattccaa
    14401 tgaatgatga acatgtgcgt agtcttaatg tctctaatac agcgtgtatg attgtatatg
    14461 aggctcttcg gcagcaacag ttcgttggtc tagatttggt tcacacctat gatggggaca
    14521 agttaaaata gtgaaaactt accaagctct tgcaaatgca aggctttttt ggtatgatga
    14581 aatagtcttc agggcagggt gagattcccg accggcagtg atttttttga ttcttgcttt
    14641 tctttttctc tcattcgtcg ttgaccaggc ttgcctaact ccagttatgc cttcgccttg
    14701 tcgcctagac tgatagaaaa atcttaagca acactcaaaa aaagtgtttt tgtttcattt
    14761 tagggctagg caaggaggtg cagactatac taagggtatg tcaagccgac ttaacgaagc
    14821 cataaaatag aaagaaagac acgtacagtc tgcgagcgaa agctgatgtg gtgcaattcc
    14881 acaaccgaca gtaaagtctg gatgggagaa gacgaagtgg aggctttttg cctgctcttc
    14941 cacgcttctt caattttcaa aaattggagg aaccttatga caaacacacg caaaatgacg
    15001 attatcgcca ttctctcagc agtatccttt ctgctcatgt atttgaaatt tccgctgatt
    15061 ccaacagcca gtttcctgga agtggatttt tctctcgtac cgattttatt tggtctgctt
    15121 gttttagata tgaagtctag ttttgctatc cttttggtac gaacttttct caaactgatt
    15181 ttaaataatc agggaccatc gacaattatt ggcttaccga tgaatattgc agctatgtca
    15241 gttttcattt tagcagtagc ttatttctgg aaaaatgacc aagcgttaaa aaattattta
    15301 aaagcagcga ctattgcgac aattggttcg acagcagtga tgctggtatt aaattacgtt
    15361 tatgcggtgc ctgtctatgc agcctttgca aattttgata ttaaagaaat cttgggtctg
    15421 actaactatc ttttgatgat ggtacttcct tttaatcttt tacaagggat tgtgctttca
    15481 gcaatatttt atatctgtta caaagcagct caacctattt taaagaaagt ttaaccttta
    15541 taaggtaaac tatactgtat gaagaataaa caaatccatt tacgaaacgc atcttttttt
    15601 gctctagcct ttgtgatatt gggctatgta gtaaaatttt atcctagtac cctagcaggt
    15661 tttgactcaa ctgtccagtc tgccattcgt ggaaatttac caagtggagc cagtcaattt
    15721 tggacctcta ttactgtttt aggaaatacg gttattattt tagctattac cttgattcta
    15781 gctactatct tttactacta taaaaaatgg aggatagaag cttatttcct acttgctagt
    15841 tttgcggcga tgggtgtggc atccacagcc ctgaaatatg tctaccaacg tccgcgtcca
    15901 agtattgaat ggttgattga taccatcggt tactcatttc ctagctggca tactgcatca
    15961 actatgatga ttgcaggagc agttgttatt attgttcacc agaggatgaa gaaaggcata
    16021 gctagacttg tgctacaagc catgttgatt ctacttgctg tcctggtagc tgtatcccgt
    16081 atctatattg gggttcacta tccgacagat attatcggcg gttggctact tgccgtcact
    16141 cttttacaaa tgatgtatcc attttatgac caaaaacgct ttgaatggcg tttccaaagt
    16201 aaacaaaaat agtcaatttg acaccaactc ctactgtaaa aggtaggagt tttaacttgt
    16261 catcttcgct ttgccgtccg ttgtagaagt ggcttatttc acaagattta ttgagactga
    16321 gctcaggcac agcgccattt ctcagagttc gcgctggact tatcggaaaa tcgtacaaaa
    16381 atcctccgag aaattctcag aggatgatga tgtataaatc tagtttttga ttgggccatc
    16441 agtaacggct tcaacggcat tttttatcgt ttgggcgaag acttcacctc cattactttc
    16501 aagattgaaa tgaacaaggt cggtattgta ccaaattggt ggattatcct ttgcagcttg
    16561 ataccagtct gcaatggaaa tgtaatcata tttttcagcc aattctttct cgtattgacc
    16621 agtttgataa gaaatggatt cgctcggagg gaagtttcca tcgtaaggag tgacaaaaat
    16681 aaggcgacgt cctttaggaa aatctttgac tagctggtct agtagttcct gataattatc
    16741 cgtagtattt gtacctaggg ctacaactac agtctctttc aagctattat tttgcttata
    16801 aagatttatc aaattagcaa tttcagagag atttcgactg acagttccat cgatctgtgc
    16861 atctggtagc gcggtctgta tggcagcact tgcgcgaaca gtaacagaat cgccaaagat
    16921 gataactcct ttttgaattt caaaactagt agctttagcg ttttcagcag cagatcgtgt
    16981 tgtatttagt tgggtctgag cttgataaag attgctaacc atgctctctt gttcaaaact
    17041 tcctaatttt ggtgcaaaca gacagatacc taagccaact atggtcaagc aagcaaagct
    17101 accaagaagc cattttttat atggttttaa atctatgggt aatccaaaca agcttcctac
    17161 ttttccagca atatatggtt ctagaatata gaaggaaata gttgatagga tagtagaaaa
    17221 aacaaaggat aatcccgcag cgatagtggc atttgtcagt tgtgtaaaga taatgagtaa
    17281 gggccaatgg aagaggtaga tatcataaga aatacttgca aagaagagga taattgcagg
    17341 ttctttgaca tcttcggttt tctcgtgaag tacccgagca gcaaaaatca tagttgctgt
    17401 agctaaactg gatagaagaa aaccaattag ataggtccag atggaactga attgaagagt
    17461 aaagagaaga agaagttcta ctcctagtcc tccaagaaac agacctatag tttgtttgat
    17521 agtcaatgta ttcacttgtt gctggaaggc ggttgttgta tttccgatac cagcgatggt
    17581 tgcgagaata ctaccgagga aaaatgggaa ggtatgtgtg aagctcgagt agtaaatggt
    17641 tgagaaatta tccacaaaga aacttgagat agacattgct aaaaaactta gcgagaagag
    17701 gcttatagat gttagaaaaa ttgatccacg tagttgcccc acacttttgg agatgcgagt
    17761 cagataccaa actaaaccag cccagacaag gtaatactga acttctatgg ctagtgtcca
    17821 agtatgcaca aatagatgag gtgaaaattg attctcgtaa ctaccacctg atagaatttc
    17881 aaagaagttt gtcatgaatc cgagcgcagc ggctatctga ttgccgatat tggcaatgaa
    17941 atcattgcgg acaagcagag caagtggaag aaccaaaaga atcgttaaaa ccagaggggg
    18001 gagaatgcga tagaatcttc ttctaaaaaa gctgacaata tctatttttt tatgttttgc
    18061 aaactcatca atcaaaaggg cggttgtcaa atatccagac agggtaaaga agaggtcaac
    18121 cccaacaaag ccacctggga aatatttgat aaagaaatga tagagtagga caaagactaa
    18181 tccaatcaca cgtataacag ataaccattt aattttcata ttgataaatc ccctgtttaa
    18241 aagttccttc gtagatagct tgtccttcgg tggtcaattt tccttttcca tcggcatagc
    18301 catttttaaa ttgcccggta taaacccacc cacttgcaga tgtgtaggtt ccttgaccgt
    18361 ggaaaattcc atttgtaaat tgtccttcgt agacatctcc attatcaaag gtcaattttc
    18421 cttgaccatt cattttattt gcgaccacat aaccgttgta ctgcagggcg ccattattga
    18481 aagtcatggc tcgcttgctg gcaattcgcc ctgtaaatac agagagggca cagatgagga
    18541 tgataataag ggagaggatt tcaagttttg gacgggtgaa atgacttgtt atatcatgcc
    18601 attttatgct aggtaatttg aactctttca tcgttttact ctttcatagg atttgaccga
    18661 cgctaatcag ttctttctag gatacagtaa gaaattatca gttcagtcag aaatagttta
    18721 ccattttttt acaaatatta caaaaatatt acatagaaaa tcttattctt ggtcaaatga
    18781 ctgtaacctg tccaaccagt tttgacaacc tttctttacc atttcgtagg tttcgtcaaa
    18841 atctccagta taccaagggt ctggtacgga tttttctgcg aattgaaaaa tcttattttg
    18901 ggcatgtgct ggtgccattt tctgtaaatc tcggacatta ttgctgtcca taccgatgat
    18961 aacatcaaat tcctcaaagt ctgcttgaga gatttgttga gaagttttgg tcttgtcata
    19021 gggaatcttg tgcttttgga aaattttctg tgttccaggg tagataggat taccatgttc
    19081 ccagtttgaa gtagcacggc tttcaatgtg aaattgattt gtcaaatctt tcatgacaaa
    19141 ttcagccata gggctacgac aaatatttcc aagacagaca aaaacgattt ttttcataga
    19201 ttctcctttc gtggcataag aaaagagaag gcagactcga caggtaaatg tctgagttcc
    19261 cctctcttgc atatttttgt tcgggctata ggtaaaagac caaattaagt gtaatgttca
    19321 ttatcaaaca gtgcacgacc aatcctacct atattgaact ctttgtttat ttctcttctt
    19381 tgtcgaaagc atttttgatg ccattaatgg caccttcaag cccatctttt gcatcttcga
    19441 ctagctcttt tgctttgcca attcctttct caacaagtcc ttcaacttcg atttccttgt
    19501 cgccggtcag cttaccaatt acctcttttg cagagccaga tagctgttct agttttgcgt
    19561 caaatttttc ttctgacata aaatccctcc tcgatataca catatggggg cgatgaggct
    19621 gggcaacaag cccaggacca cttctcagag
//
LOCUS       DASFQS010000038        18928 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.038, whole genome shotgun sequence.
ACCESSION   DASFQS010000038 DASFQS010000000
VERSION     DASFQS010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18928
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.038"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..2649
                     /locus_tag="U1041_001115"
     CDS             <1..2649
                     /locus_tag="U1041_001115"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:TIGR04320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HEM4768228.1"
                     /translation="ATTAITLATVGASTVSADTQYGIVLNRVTGEWQTVNRTTGEIVK
                     SEPNGTYSTYDEANAGLSSWLETQASTVETPVAETTAVETPKTSADVKPALDAQQAVV
                     DATAQDATNAQADAAATNQAVATAQADVDTATQAVKDAEANTANATPENIAANQADQT
                     ANLADQATNATETDEVNAEIVDQTGKVADAQTAVDTAQAEKDAADANVTAKETDVKAA
                     QDALSGTGLAEAQATLDQATKDVATATTALDTATKAANAAKKTDADRQSAIDAATTDV
                     AVKTDAVTTASAKLTAAQDAVKQTTDALTKATDAVKSAQDALALANVDTVTFTGTKQD
                     IDNFKESLNMWNQNKTDQLWKNTLIGDGVKMAQGFNTTISPADKNEIVNFNALTDEQI
                     QELALYNLQVVNAVREQLDLPKLELNTGSMKAAQDQMNKYVARNKNILTSGHLPGDYF
                     GENGGPIALAKYGTSMTMYDVKQAIYEFVMVQAFMDAPSNWGHSKNLQTGASDFGASF
                     GIIAGELYSINVFGVYTGAEITNPNDTTTLQAALTKAQADQAQAQTASDAAKAELTKA
                     SSDYATALEAKTAAEKALADATATPLQTQVAENNLRLATIALQNAEARKADAQKAVDN
                     LSANLADKKAALDTAKADLAQVQATATAKAEVLETAKANLATQQATLDSLNKDKAALL
                     AEKDRLVEEAKALAEELDGYMNAPVRLANAQATLTEKQAALTEAQAKAETAQNKLETV
                     TAKLAAEESKLAELQAEYDKLKDLEDKAKDNVIATLPDGTIVAIPKDAPTAVEKPAID
                     VDAVKDAITKGQDVTVVDGEVVVTNPQAGVTVTQTATGEKVTYSRVDRAKTLPNTGEQ
                     TSLLALAGVAVLSSLGLASARRRKQG"
     gene            2935..3636
                     /locus_tag="U1041_001116"
     CDS             2935..3636
                     /locus_tag="U1041_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768229.1"
                     /translation="MKTVGKFFAKKLASLLVLLLVLGMGIFWFRNSILAWFQGTHKVQ
                     YEFVIKKFEAESKLVVAGAEVDTTANQTFENNKLKEWPDWTEPITKLFVGREMSVDIP
                     VQTEFKLVLEGIGQSDVQIQNNTLTFKKPVLVEVDSQQHGEIKISNNSNGLLDKAVDV
                     FTSGQKAQEFLNDKSQEAIYKTSEEVLNDTGRQEKVAAFAETALENLLNLNSEEKLEV
                     EIEVADLNFQIVDKK"
     gene            3750..5030
                     /locus_tag="U1041_001117"
     CDS             3750..5030
                     /locus_tag="U1041_001117"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEM4768230.1"
                     /translation="MKLQKPKGTQDLLPQDSAKWQYVENFTRSIFKQYNYAEIRTPIF
                     EHYEVISRSVGDTTDIVTKEMYDFYDKGERHITLRPEGTAPVVRSYVENKLFAPEVQK
                     PAKFYYMGPMFRYERPQAGRLRQFHQIGVECFGSSNPATDVETIAMAYHFFEELGIKD
                     IRLHLNSLGNPESRAAYRQALIDYLTPLKDQLSKDSQRRLEENPLRVLDSKEKEDKVA
                     VENAPSILDYLDEESTAHFEAVKSMLDSLGIAYTIDTNMVRGLDYYNHTIFEFMTEVG
                     GNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVLEKQGIELPLDTQLDVYIA
                     VLGQEANSGALELVQAIRKQGFRAERDYLDRKLKAQFKSADVFGAKAIITLGGSELES
                     GLVVVKNNQTRSQVETSLETLKTDFASILEELEK"
     gene            complement(5109..6134)
                     /gene="adhP"
                     /locus_tag="U1041_001118"
     CDS             complement(5109..6134)
                     /gene="adhP"
                     /locus_tag="U1041_001118"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEM4768231.1"
                     /translation="MKAVVVNPESTGVVVVEKELRPLEAGEALVQIEYCGVCHTDLHV
                     ANGDFGKVPGRVLGHEGIGIVTEIAPDVTSLKVGDRVSVAWFFQGCGTCEYCTTGRET
                     LCRTVKNAGYSVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTCYKAIKEAHL
                     EPGQWIAIYGAGGLGNLAVQYAKKVFNAHVIAVDINNDKLELAKEVGADVIINGLEVE
                     DVPGYIKEVTGGGAHSTVVTAVSKVAFNQAIDSVRAGGYVVAVGLPSEYMDLSIVKTV
                     LDGIKVVGSLVGTRKDLEEAFHFGAMGLVVPVVQKRPVDDAKAVFDEMAAGTIQGRMV
                     LDFCHHH"
     gene            6580..9231
                     /gene="adhE"
                     /locus_tag="U1041_001119"
                     /gene_synonym="adhC"
     CDS             6580..9231
                     /gene="adhE"
                     /locus_tag="U1041_001119"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000763984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HEM4768232.1"
                     /translation="MADKKVVSPEEKLVEARKHVDELVQKGLVALDEFRKLGQEEVDY
                     IVAKASVAALDKHGELAMHAFEETKRGVFEDKATKNLFACEHVVNNMRHTKTVGVIEE
                     DEVTGLTLIAEPVGVICGITPTTNPTSTAIFKSLIALKTRNPIVFAFHPSAQESSAHA
                     ARVVYEAAVAAGAPENCIQWITKPSMEATSELMKHDGIATILATGGNAMVRAAYSCGK
                     PALGVGAGNVPAYVEKSANIRQAAHDIVMSKSFDNGMVCASEQAVIIDKEVYDEFVAE
                     FKSYKTYFVNKKEKALLEEYCFGVKANSKNCAEGKLNADIVGRPAAWIAEQAGFSVPE
                     GTNILAAEVAEIGEKEPLTREKLSPVIAVLKVDGRAEGLEAARQMVEFHGLGHSAAIH
                     TEDAELAKEFGTIVRAIRVIWNSPSTFGGIGDVYNAFLPSLTLGCGSYGRNSISDNVS
                     AMNLLNIKKVGRRRNNMQWFKVPSKTYFERDSIQYLQKCRDVERVMIVTDRAMVELGF
                     LDRIIEQLDLRRNKVVYQIFSDVEPDPDITTVYKGTELMRTFKPDTIIALGGGSPMDA
                     AKVMWLFYEQPTVDFHDLVQKFMDIRKRAFKFPELGKKSKFIAIPTTSGTGSEVTPFA
                     VISDKANNRKYPIADYSLTPTVAIVDPALVLTVPAHVTADTGMDVLTHATEAYVSTVA
                     NDFTDGLALQAIKLVFENLESSVKNADFVSREKMHNASTMAGMAFANAFLGISHSMAH
                     KIGGRFHTVHGRTNAILLPYVIRYNGTRPAKTATWPKYNYYKADEKYQDIARLLGLPC
                     STPEEAVAAYAQAVYDLGERIGIQMNLKAQGIDEKELKEHSRELALLAYEDQCTPANP
                     RLAMVDHMQEIIEDAYYGYKERPGRIK"
     gene            9779..11263
                     /locus_tag="U1041_001120"
     CDS             9779..11263
                     /locus_tag="U1041_001120"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006595200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEM4768233.1"
                     /translation="MTLVYQSTRDAKNTVSASQAILQGLATDGGLFTPISIPAVDLDF
                     SVLKDASYQEVAKLILSAFLDDFTADELDYCINNAYDSKFDTPVIAPVVKLKGQYNLE
                     LFRGSTIAFKDMALSILPYLMTTAAKKHGLENEIVILTATSGDTGKAAMAGFADVPGT
                     QIIVFYPRDGVSKVQELQMTTQTGANTHVVAIDGNFDDAQTNVKHMFNDEALRAKLAA
                     KKLQFSSANSMNIGRLVPQIVYYVYAYAQLVKTGEIAAGDKVNFTVPTGNFGNILAAY
                     YAKQIGLPVGKLICASNDNNVLTDFFSTGVYDKNRTFRVTTSPSMDILVSSNLERLIF
                     HLFGNDAGKTAELMEALNKAGQYDIQGADADILSLFAAAFATEEETAAEIKRVYDESN
                     YIEDPHTAVASAVYKQYVEQTGDQTPTVIASTASPYKFPVVAVEAVTGQSGLTDFEAL
                     AKLHEISGVALPPAVDGLETAPVRHTTVVAAAAMQAEVERYLGV"
     gene            11391..13151
                     /locus_tag="U1041_001121"
     CDS             11391..13151
                     /locus_tag="U1041_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEM4768234.1"
                     /translation="MAQEQEKISREKKKALLKRLKERIKPKMKLVYLAAFLSWVQFLM
                     RIISFYLIAKGFVTYCEGGQVDLVRFVLILLGLNAFGYGAALIAKRLQGLGSQFARDS
                     LKQSFFEALLAKDGRFESKATAADVFNIASQGIDSLDTYYSYYMASSLRTQFNCATVL
                     LLVFLIFPLGAVIFILALPLIPISIIAMQKRSKRIMNRYWGSYMDVGNLFLDDLKGLN
                     TLYSYQADATYEKTFNEQAEDFRDATMELLSFQLQAVGYMDAVMYLGIGLSGFVAVNS
                     LAAGNLSLFSMLFFVLIATEFFAPIREQGYGMHLVMMNTKMADRIFGFLDSMTAEREI
                     DSVHVPVFDSLKLENLAFAYGEKPVLKDISMTMTAGKVYALAGKSGQGKTTLAQLLLG
                     RLRADKGAIYLGEQEISTVSQLSLNEQVLYVSGQSTLLNQSIYDNLRMAVDWSKEDIL
                     AWADQHGVLQFVKNLPDGLDTIVGDDGAFLSPGQRQQVICARAVLAKRSLYIFDEVTS
                     SVDQDNEGLIYDLINLVAKDAIVIIITHKMKQVEQADDILFLSAEGAVTGNHATLYQT
                     SSAYGQLVNQQRELEEAVYG"
     gene            13144..14805
                     /locus_tag="U1041_001122"
     CDS             13144..14805
                     /locus_tag="U1041_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768235.1"
                     /translation="MDKKEMPTGVLIPRLLQSMKHLLPRIAVAVCFAVLGQVVTIAIP
                     VMLVYLAFDALAGNPAPLWTLGALILLALLRGAFRYGEHYFGHYVAFHTLAAYRRLIF
                     AKLRALTPGKLDRQDSGSLLKMIGEDIEALEVFFAHTIAPICTGILVALGLTVYFGLS
                     SWGLAFLALVTYALLAIAIPNRFAQQLQPLLKEQNASRKDYVSYFIESLKSMKDLMQF
                     QQTDERFANLTQKSQEVNGQERKVAQTNFMQYAVSFLVVGLSIMGFAWLTFDLVGSQS
                     LDLATGVALLVSFTSSFAPFLELSRLPLGFKRAMNAGRNIYALLDEKEAERTGELVEV
                     SVTDIAIEQLDFDYDDRETGLYRNLSVQFEQGRIIGLVGESGAGKSTLMKLIMRWYDW
                     QQGQIRLSGLDSRKVDKAHLQGSFAYVPQVPQIFCQTIRENLVLGRTDVLDETIMDLA
                     EKCHMKERILATPQGLDTIVEASDFSAGEGQRLELMRALLKNADCYIFDEPTSNLDSL
                     NEARFIQLVKEHCQGMVFLISHRSSTMACADTIFRLEDGQLVKEK"
     gene            14806..15399
                     /locus_tag="U1041_001123"
     CDS             14806..15399
                     /locus_tag="U1041_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MptD family putative ECF transporter S
                     component"
                     /protein_id="HEM4768236.1"
                     /translation="MKKLQVKDLMVTGAFAALYFVCVGLGTLLSLVFDRSGNMMYAPA
                     GAALLAGPVYMLLVAKVGKFGSISLVGAVMACFFFLSGYMTAAFLPSLTFGFLAEMVA
                     KSGHYKQKWTNLFSYIIFSFGNLGPIILMWFMRDAYEANLLARGKSAEYIARVMLDFT
                     PENVLWLSTTIILTALISGLFGQYMLQRYFKQSGYLS"
     gene            15396..16055
                     /locus_tag="U1041_001124"
     CDS             15396..16055
                     /locus_tag="U1041_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM4768237.1"
                     /translation="MKLDARTKIILVIFTSFTYGMRLTILENAVLVLGLSLLFWFSGK
                     RKMAIMSPIAYSIFCLLSYITFLPAWLTHLLLVLTYTWPPLLAGHLLLMTTSGYELIH
                     GLRKWHLPEVFLLTLGVMFRFLPAIKQDARTICASLKVRGIFLRKRDVVCKPLQYMEF
                     FLVPLMMSLLRTAQELTVASLTKGLAVSTKSPAYIRSSWTVLDWSLCLCCLGFLILVR
                     L"
     gene            16019..17446
                     /locus_tag="U1041_001125"
     CDS             16019..17446
                     /locus_tag="U1041_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768238.1"
                     /translation="MLSRFSDSRPAVTVKNVALTYSGADKPALQIEDLTIPEGQCVVL
                     CGESGSGKSSFLKVLNGLTPEYYPAQLSGQIFLGDLDLQKSSLEEISRHIASVFQHPS
                     TQFFHSQVLQELVFPCENQGLSREEIENRLAWVMELFGLASLSQRTISSLSGGQQQRL
                     ALAVAAMQGTDVLVLDEPTANLDQEGIAIVEDILKTLKSQGKTIIIAEHRLSYLSQLA
                     DRYLYFQDGQVVTDYPASDFLHRTEECRQDMGLRCYDSEPYGRAIAELADQFVNDKEG
                     LLVENLSVSQKENTLYEIEKLCLAPGQVVGLVGANGSGKTSLARYLVGLAEDKKSRIS
                     WQGQILSSRQRLEKTAFVMQDVRLQLFAESVERELTLGRKNRAVDEHLVARFGLSDLL
                     ERHPVSLSGGEQQRVMIVASLLADKEIFIFDEPTSGLDLRRMQQVASALVDLKMKNKL
                     VLLISHDEELLNLVCDKIVDIKQLK"
     gene            17452..18732
                     /locus_tag="U1041_001126"
     CDS             17452..18732
                     /locus_tag="U1041_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4768239.1"
                     /translation="MNKQTYKEILTIAFPAMGENLLQMLMGVVDSYLVASIGIVALSG
                     VSLANNILAVYQAVFIALAAAVSSRLAQALGEGGSEGIGGTASESVKFTVFIGLLLGI
                     FSVLAGPIVLTSLGAESEVVQAGGLYLILVGGGAPFLGLMTSLSAILRTLGEPRFPMY
                     ISLLSNVLNALFSAFAVFVLHAGVAGVAIGTVLSRLIGCSLLWSRLPISLKPWTWSFD
                     KELLRLALPATGERLMMRAGDVVVVALITSLGTAVVAGNAIGETLTQFNYMPAMSIAT
                     ATIILTAQHRQDQLAVQRIFKTSLHLSLIFMLLMAATTYFAGPFLTSLYSREPQVVQA
                     SQTVLLYSMLGVPVTAATLILTALWQGLGNAKLPFYATSLGMWLVRIGLAYLLVGIFQ
                     LGLQAIWIATIVDNAFRAGLLYVQYKRVGKVKTD"
BASE COUNT         5344 a         3966 c         4390 g         5228 t
ORIGIN      
        1 gcaactactg ctatcaccct tgcaaccgtt ggtgcgtcta ccgtatcagc agatacacaa
       61 tacggtattg ttttaaaccg tgtgactggt gagtggcaaa ctgtcaatcg taccacaggc
      121 gaaattgtaa aatctgaacc aaacggtaca tactctacat atgacgaagc aaacgcaggt
      181 ttatcctcat ggttagaaac tcaagcatca actgttgaaa caccagtagc agaaactaca
      241 gctgtcgaaa cacctaaaac atcagctgat gttaaaccag ctcttgatgc tcaacaagct
      301 gttgttgatg ctactgctca agatgcaact aacgctcaag ctgatgcagc cgcaactaac
      361 caagctgttg ctactgctca agcagacgtt gatactgcaa cacaagcagt caaagacgct
      421 gaagcaaata ccgcaaacgc aacaccagaa aacattgcag caaaccaagc tgatcaaaca
      481 gctaaccttg ctgaccaagc tacaaacgct actgaaacag atgaagtcaa cgctgaaatt
      541 gttgaccaaa ctggtaaagt cgcagacgct caaactgctg ttgatactgc tcaagcagaa
      601 aaagacgcag ctgatgctaa cgtaactgct aaagaaactg acgtaaaagc agcacaagac
      661 gccctttctg gcactggtct tgctgaagct caagcaaccc ttgaccaagc aactaaagat
      721 gtcgctacag caactactgc tcttgatact gcaactaagg ctgccaacgc tgctaagaaa
      781 acagatgcag accgtcaaag tgcaattgat gcagcaacaa ctgacgttgc agttaaaaca
      841 gatgctgtaa caactgcgtc agcaaaattg actgccgcac aagatgctgt taaacaaaca
      901 actgatgcac taactaaggc tactgatgct gtcaaatcag cacaagatgc tcttgctctt
      961 gcaaatgttg atactgttac gttcacagga actaaacaag acattgacaa ttttaaagaa
     1021 tcactcaata tgtggaacca aaacaaaacc gaccaattgt ggaaaaacac attgatcggc
     1081 gatggtgtca aaatggcaca aggttttaac acaactatta gtccagctga taaaaacgaa
     1141 attgtcaact ttaatgcctt aacagatgaa caaatacaag aacttgcact atacaatcta
     1201 caagtcgtaa acgctgttcg tgaacaactt gatttgccta aactcgaatt aaatacaggt
     1261 tcaatgaaag ctgctcaaga ccaaatgaac aagtacgtag ctcgcaacaa aaatatctta
     1321 acatctggtc atttaccagg cgattacttt ggcgaaaacg gtggcccaat tgcactggct
     1381 aaatatggca catcaatgac tatgtacgat gtgaaacaag caatttacga atttgtaatg
     1441 gttcaagcct ttatggatgc gccatcgaac tggggtcact caaagaatct ccaaacagga
     1501 gcatctgatt ttggtgcatc atttggtatc attgctggtg aattgtactc aatcaacgta
     1561 tttggtgtct acacaggtgc agaaatcacc aatcctaacg atacaacaac acttcaagcc
     1621 gctcttacta aagcacaagc tgaccaagct caagcccaaa ctgcatcaga cgcagctaaa
     1681 gctgaattga ctaaagcaag ttcagattac gctaccgcac ttgaagcaaa aaccgcagca
     1741 gaaaaagctc ttgctgacgc tactgcaaca ccgcttcaaa cacaggtagc agaaaataac
     1801 ctacgtcttg caacaattgc acttcaaaat gctgaagctc gcaaggcaga tgcacaaaaa
     1861 gcagttgaca acttatcagc aaatcttgct gataagaaag ctgcacttga tacagcgaaa
     1921 gctgaccttg ctcaagtaca agctactgct actgcaaaag cagaagttct tgaaacagct
     1981 aaagctaacc ttgctacaca acaagctaca cttgatagct tgaacaaaga caaagcagca
     2041 cttcttgcag aaaaagaccg cttggttgaa gaagcaaaag cacttgctga agaactcgat
     2101 ggttacatga acgcaccagt acgccttgct aacgctcaag caaccctcac agaaaaacaa
     2161 gctgctctaa ctgaagcaca agctaaagct gaaacagcac aaaacaaact tgaaactgtt
     2221 actgctaaac ttgcagcaga agaaagcaaa ttagctgaac ttcaagctga gtatgacaaa
     2281 ctcaaagacc ttgaagacaa agcaaaagac aatgtgattg caacacttcc agacggaaca
     2341 atcgttgcaa taccaaaaga tgctccaact gctgttgaaa aaccagctat tgacgtagat
     2401 gcagtcaaag acgctattac taaaggtcaa gatgtaacag ttgttgacgg ggaagttgtg
     2461 gtgacgaacc cacaagcagg tgtcaccgtg acacaaacag ctactgggga aaaagtgaca
     2521 tactcacgtg tagaccgtgc taagaccttg ccaaacacag gggagcaaac aagtttgttg
     2581 gcactcgcag gtgtggcagt attatctagt cttggtcttg caagtgcaag aagacgcaaa
     2641 caaggatagg tagcgaatat gaaaaaaatc ttcttactat gacagtagga agattttttt
     2701 ggattgccaa aattattgaa aagcttgttc tattccgaca gttttgggaa atttttaatg
     2761 atttctttta ccgttaattg gaatggtgat gtttattgag aagggttaaa acagaaaaaa
     2821 tctaggactt tgctaaaata gtcaaaaaag aaagaaaata cttgacagca tatatatata
     2881 tatatataat ggttatagga caagttccaa ttattcaata taaaggagaa ctgtatgaaa
     2941 acagttggaa agttttttgc gaaaaagttg gctagcctct tagtcttgct gctggtttta
     3001 ggtatgggta ttttctggtt tagaaatagc atcctagcat ggttccaggg aacccataag
     3061 gttcaatatg aatttgtcat taagaagttt gaagcggaaa gcaagctggt tgtagcaggt
     3121 gctgaggtgg atacgactgc caaccagacc tttgaaaaca ataaattaaa ggaatggcca
     3181 gactggacag aaccgattac caagctcttt gtaggacgtg aaatgtctgt tgatattcct
     3241 gtgcagacgg agttcaagct ggtcttggag ggcattggtc agtctgatgt tcagattcaa
     3301 aacaatacct taaccttcaa gaaacctgtg cttgttgaag ttgattctca gcaacatgga
     3361 gaaatcaaaa tcagcaataa tagcaatggt ctgctagaca aggctgtcga tgtcttcact
     3421 tctggacaaa aggctcagga atttctaaat gacaaatccc aagaagccat ttacaagaca
     3481 agcgaggaag tattgaatga cacaggacgc caagaaaaag tagcggcctt tgcagaaaca
     3541 gctttagaaa acctcctcaa tctcaactcc gaagaaaaac ttgaggttga aatcgaagtt
     3601 gcagacttga atttccagat tgtggataag aaataacttt ttaaacaagg tcgtgtcagt
     3661 aggcacggct ttttgtctgc tctgccattt ccaaaaaaga ctaaaatatg ataaaataag
     3721 gggcaagata tagagaagtg agaagaccta tgaaactaca aaaaccaaaa ggaacacagg
     3781 atttactacc gcaggattct gctaaatggc agtacgtgga aaactttacc cgcagcattt
     3841 tcaaacagta caattacgct gagattcgca caccgatttt cgagcattac gaggtgatca
     3901 gccgttcggt tggcgatacg acggacattg tgaccaagga gatgtacgat ttctatgaca
     3961 agggagagcg tcatatcacc ctacgtccag aagggacagc accggttgtt cgttcttatg
     4021 tagaaaataa gctctttgcc ccagaagtac aaaaacctgc taagttctat tacatgggcc
     4081 caatgttccg ttacgagcgc ccacaagctg gtcgtctgcg ccagttccac cagattggtg
     4141 ttgagtgctt tggctctagc aacccagcaa cagatgtgga aaccattgct atggcctatc
     4201 acttctttga agagttggga atcaaggaca ttcgcctcca cctcaacagt ctgggcaatc
     4261 ctgagagccg tgccgcttat cgccaggctt tgattgatta tctgacaccg ctcaaagatc
     4321 agttgtctaa agatagtcag cgccgtctag aagaaaatcc cctgcgtgtt ctggattcta
     4381 aagagaaaga agacaaggtc gctgtggaaa acgcaccgtc tatcctggac tatctggacg
     4441 aagaaagtac tgctcacttc gaggcagtca agtccatgct ggacagctta ggtattgctt
     4501 acaccattga caccaacatg gtgcgtggtt tggactacta taatcatact attttcgagt
     4561 ttatgacaga agtgggtggt aacgacctga ccatctgtgc cggtggacgt tacgacggtt
     4621 tggtgaccta ctttggcgga ccagaaacgc cagcttttgg ctttggtatg gggattgaac
     4681 gtctcatcct agtccttgaa aagcaaggca tcgagctccc tctcgacacc cagttagatg
     4741 tttacatcgc ggttttaggt caggaggcca atagcggagc gttggagctg gttcaagcca
     4801 tccgcaagca aggcttccga gcagagcgtg actatctaga ccgcaagctc aaggcccagt
     4861 tcaagtcagc agatgtcttt ggagccaagg ccatcattac acttggtgga agcgagctag
     4921 aaagcggact ggttgtggtt aagaataacc agacaagaag tcaagttgaa acaagcttgg
     4981 aaacactcaa aacagatttt gcaagtattt tagaagaatt ggagaagtag tagcctgggc
     5041 tgctactttt ttataaagaa aaaagagaag cgactgttgg gtcgcttcta gctttagtgg
     5101 agaacaaatt agtgatggtg acagaaatct aagaccatac gaccttgaat agttccagca
     5161 gccatctcat caaagactgc tttggcatcg tccactggac gtttttgaac gacaggaaca
     5221 accaagccca tagcaccgaa gtggaaggct tcttctaggt ctttacgagt accaaccaga
     5281 gagccgacaa ccttgatacc gtctagtact gttttgacaa tgctgagatc catatattca
     5341 gatggaagtc cgacagccac cacatagcct cctgcacgaa cgctgtcaat agcctggttg
     5401 aaggcaacct tagaaacagc cgttacgaca gttgagtgag caccgccacc agttacttcc
     5461 ttgatatagc caggcacgtc ttccacttca agaccattga tgatgacatc tgcaccgact
     5521 tccttggcta attccaattt gtcattattg atatctacag caataacgtg ggcattgaac
     5581 acttttttag cgtattgtac agcaaggttt ccgagtccgc cagcaccata gatagcaatc
     5641 cattgacctg gttccaagtg agcttcttta atcgctttgt agcaagtaac gccggcacaa
     5701 gtgatagaac ttgcttgagc tggatcaaga ccttctggaa cttttactgc atagtctgct
     5761 gttacaatac attgctcagc cataccaccg tcaacagagt agcctgcatt ttttacagtg
     5821 cggcagaggg tttcacggcc agtagtacag tattcgcaag taccacagcc ttggaagaac
     5881 caagcaacgc tgacacggtc gccgaccttc aagctggtca catcaggagc gatttctgta
     5941 acaataccga ttccttcgtg accaagaacg cgaccaggaa ccttaccaaa atcaccattg
     6001 gcaacgtgta agtctgtgtg acaaacaccg caatactcaa tctgaaccag agcttcgcca
     6061 gcttcaagtg gacgaagttc tttttcaaca acgacaacac cagtagattc tggattaaca
     6121 acaactgctt tcatggcaga cctcctattt attgcagcac attttttgaa tgtgttaata
     6181 tagatatttt cttgttaata atatcacaat gtgaacaaaa atgcaagagt agagaaggag
     6241 ggacaaatga atataaaatt gaaaattatc acgtaattac tacaaaattt tcaaaaaaat
     6301 ctatttacat ggaagcgttt tcttgataaa ctagtatcgt aaatgttaga gaaagaataa
     6361 atgataaaga tttgtcttag tttatgtatt tttcgcccaa acaaagcaga aacaaatctg
     6421 aatgttttct gaaaaaaaga aaaagtaagc gttttccata acaaaacaga aaaaatgtga
     6481 aaaaattaac aatttctctt tacaaataaa ataaaaaata gtagaataac attgtgaaaa
     6541 agttaacaaa tagttagcga gtatatttgg aggaacacaa tggctgataa aaaagtagta
     6601 tcaccagaag aaaagttggt agaagcgcgc aagcacgtcg atgagcttgt tcaaaaaggt
     6661 ttggttgctc ttgatgagtt ccgtaaactt ggtcaagaag aagtagacta tattgtagcg
     6721 aaagcttcgg ttgcagccct tgataaacac ggtgaattgg caatgcacgc ctttgaagaa
     6781 accaagcgtg gtgtattcga agacaaggct actaagaact tgtttgcctg tgagcacgtt
     6841 gtcaataaca tgcgccacac gaaaactgtt ggtgttatcg aagaagatga agtgacaggt
     6901 ttgactttga ttgctgagcc ggtcggtgtt atttgtggta tcacaccaac aacaaaccca
     6961 acttctacag caatctttaa atcattgatt gccttgaaga cacgtaatcc aattgttttt
     7021 gccttccacc catctgcgca agaatcttct gctcatgcag ctcgtgttgt ctatgaagca
     7081 gctgtggcag caggtgctcc tgaaaactgt atccagtgga ttacaaaacc atctatggaa
     7141 gcaacttctg aattgatgaa gcatgatggc attgcaacga tccttgcaac tggtggtaac
     7201 gccatggtgc gtgcagctta ctcttgtggt aaacctgccc ttggtgtagg tgcaggtaac
     7261 gttccagcct atgttgaaaa atcagcaaat atccgtcagg cagcacatga catcgttatg
     7321 tctaagtcat ttgacaacgg tatggtctgt gcgtcagaac aagcagttat cattgataaa
     7381 gaagtttacg atgagtttgt agcagagttc aaatcttaca aaacttactt cgttaataag
     7441 aaagaaaaag ctcttcttga agaatactgc ttcggtgtaa aagccaacag caaaaactgt
     7501 gctgaaggta aattgaacgc agacatcgtt ggtcgcccag ctgcatggat tgctgagcag
     7561 gccggcttct cagttccaga aggtacaaac atcttggcag ctgaggttgc tgaaatcggt
     7621 gagaaagaac cattgactcg tgagaaattg tcacctgtta ttgccgtctt gaaagttgat
     7681 ggtcgtgcag aaggtcttga agcagctcgc caaatggttg aattccacgg tctcggtcac
     7741 tctgcagcta ttcatacgga agacgcagaa ttggcgaaag agtttggtac aatcgtacgt
     7801 gctatccgtg ttatttggaa ctctccatct actttcggtg gtatcggtga tgtttacaac
     7861 gcattcttgc catcattgac acttggttgt ggttcttacg gacgcaactc aatcagtgat
     7921 aacgtaagtg ctatgaactt gctcaacatc aagaaagtag gaagacgtag aaataatatg
     7981 caatggttta aagttccttc taaaacatac ttcgaacgtg actctatcca atatctccaa
     8041 aaatgccgtg acgttgaacg tgtcatgatc gttacagacc gtgccatggt agaacttgga
     8101 ttcctagatc gtatcatcga acaattggac cttcgtcgta ataaagttgt ttatcaaatc
     8161 ttctcagacg ttgagccaga tccagacatc acaacggttt ataaaggtac agaattgatg
     8221 cgtaccttca aaccagatac aatcatcgca ctcggtggtg gttcaccaat ggatgctgcc
     8281 aaagttatgt ggctcttcta cgaacaacca acagttgatt tccatgacct agttcaaaaa
     8341 ttcatggata tccgtaaacg tgccttcaag ttcccagaac ttggtaagaa atctaagttt
     8401 atcgcgattc caactacatc aggtacaggt tcagaagtaa caccgttcgc cgtaatctct
     8461 gataaagcaa acaaccgtaa atacccgatc gctgactact cattgacacc aactgtggca
     8521 atcgttgacc cagcactcgt attgacagta cctgcacacg ttacagcaga tactggtatg
     8581 gacgtattga ctcacgctac agaagcatat gtttcaacag tagcaaacga ctttacagat
     8641 ggtttagcac ttcaagctat caaactagta tttgaaaacc ttgaaagctc agtgaagaat
     8701 gctgactttg tatcacgtga gaaaatgcac aacgcatcaa ctatggcagg tatggccttc
     8761 gccaacgcat tcctaggtat ttctcactca atggctcata agattggtgg acgtttccat
     8821 actgttcacg gtcgtacaaa cgctatcttg cttccatacg ttatccgcta caacggtact
     8881 cgtccagcta agacagctac atggcctaag tacaactact ataaagcaga tgaaaaatac
     8941 caagacatcg ctcgtcttct aggcttgcca tgctcaacac cagaagaagc tgttgcagca
     9001 tacgcacaag cagtttacga cctcggtgaa cgcatcggta tccaaatgaa cttgaaagca
     9061 caaggtatcg acgagaaaga actcaaagaa cactctcgcg aattggctct tcttgcctac
     9121 gaagatcaat gtaccccagc taacccacgt ctagcaatgg ttgaccacat gcaagaaatc
     9181 atcgaagatg cctactacgg ttacaaagaa cgtccaggtc gcatcaagta aggattttcg
     9241 tcacgataca tcgttaaagc tccttgccta actttagtta tgcctacgtc gctttgcctt
     9301 gtctcgttta gaaaatcatt ccttgatgat tttaggaaaa actgatttca aaatgaatgt
     9361 gcggaggata actgtcgtca tgatacgtcg ttaaagctcc ttgcctaact tcagttatgt
     9421 ctacgtcgct ttgccttgtc tcgtttagaa aatcatccct tgatggtttg ggtagtttcg
     9481 tcaatctgcc tagaaagact taggactaga aaaagtctag gtaggagtag caaatcgtat
     9541 cctactcagt tgaacggagt acgatttata ggtaaattgc ctccaaatat cgtaagacaa
     9601 tcctctattg aaaaataggg gattgtttgt ttagaaataa tggtggagat tctgtaaaaa
     9661 gtgaaagtgg ttggaaagtt agggtttagc cgagaaaaag agacttttct atctatcttt
     9721 cacaattttc tgtcaattta tggtagaata gaaaaaatag atttttacgg ggaatattat
     9781 gacactagtt tatcaatcaa cacgtgatgc aaaaaatact gtatcggcta gtcaggcgat
     9841 tttacaaggc ttggcgaccg acggtggttt gtttacaccg atttctattc cagccgttga
     9901 cttggacttc tctgttctca aagacgcttc ttatcaagaa gttgccaagc tgattttgtc
     9961 ggctttcttg gatgatttta cggcagatga actggactac tgtatcaaca atgcctatga
    10021 cagcaagttt gacacgccag ttattgcccc agttgttaag ctaaaaggtc agtacaactt
    10081 ggaacttttc cgtggctcaa ccattgcctt taaggatatg gctctgtcca tcctgcctta
    10141 cttgatgacg actgcggcga aaaagcatgg tttggaaaat gagattgtca tcttgacagc
    10201 gacttcaggt gatacaggca aggcggctat ggctggattt gcggacgtcc ctggcacgca
    10261 aatcatcgtc ttctatccac gtgacggtgt gtctaaggtt caggagttgc agatgaccac
    10321 gcagacaggg gctaatacgc acgtggtggc cattgacgga aactttgacg atgcccagac
    10381 aaatgtcaag cacatgttca acgatgaggc ccttcgtgcc aagttggcgg ctaagaaact
    10441 ccagttttca tcagccaact ccatgaacat cggccgcttg gtgccacaga ttgtttatta
    10501 tgtctatgcc tatgctcagc tggtcaagac tggcgagatt gcggcgggtg acaaggttaa
    10561 cttcaccgtt ccgacgggta acttcggtaa tatcttggcg gcttattacg ctaagcagat
    10621 cggtctgcca gttggcaagc tcatctgtgc ttccaacgat aacaatgtcc taaccgactt
    10681 cttctcgact ggcgtttatg acaagaaccg taccttccgc gtgaccacca gtccgtccat
    10741 ggacatcttg gtgtcctcta acttggagcg gttgattttc catctctttg gtaatgacgc
    10801 tggcaaaaca gccgagctca tggaagcatt gaacaaggct ggccagtatg acattcaagg
    10861 ggctgacgcg gatatcctct ctctctttgc tgccgccttt gcgacagaag aagaaaccgc
    10921 tgcggaaatc aagcgtgtct atgacgagtc aaactacatt gaagatccac atacggctgt
    10981 tgcctcagct gtctataaac agtatgtgga gcaaacaggc gaccagactc cgacagtgat
    11041 tgcatcaact gctagtcctt acaagttccc tgtggttgcg gttgaggctg tgacaggcca
    11101 gtcaggcttg accgactttg aagcccttgc aaaattgcat gagatttcag gtgtagccct
    11161 gccaccagct gtggacggct tggaaacagc acctgtccgt cacactaccg ttgttgcagc
    11221 agcagcaatg caggctgagg tggaacgcta tttgggtgtt taatctataa atgattgcta
    11281 acaaactgtt cagctgagca gtttgttttc tttgtattgt ttaaattaaa atttacagac
    11341 aattcaaaga atggtatact agatgtaaat acttgtagat gaggtggcct atggcacaag
    11401 aacaggagaa aatctccaga gaaaagaaaa aagccctctt gaagcggctc aaagaacgca
    11461 tcaaacccaa gatgaagctg gtttatttgg cagcctttct atcctgggtc caatttttga
    11521 tgcggattat ttccttctac ctgattgcta agggctttgt cacctactgc gagggcggac
    11581 aggttgattt agtacggttt gtcctcatct tgctaggtct caatgccttt ggttatggtg
    11641 cggctttgat tgccaagcgt ttgcagggct tgggttccca gtttgctcgg gattcactca
    11701 agcagtcttt ctttgaggct ctcttggcca aggacggtcg gtttgagtca aaagcgacag
    11761 cggcggatgt ctttaatatc gcttcgcagg ggattgatag cctggatacc tactattctt
    11821 actacatggc ttcttccttg cggacccagt ttaactgtgc gactgtgctc ttactggtct
    11881 ttctgatctt tccattgggg gcagtcattt tcatcttggc tttgcctctg attcccattt
    11941 ccatcatcgc tatgcagaag cggtccaagc ggatcatgaa tcgctactgg ggatcctaca
    12001 tggatgtggg caatcttttc ctagacgacc tcaagggcct caataccctc tattcctatc
    12061 aggcggacgc gacttatgag aaaaccttca atgagcaggc cgaggacttc cgcgatgcga
    12121 ccatggagct actcagcttt cagttgcaag cggtgggcta catggatgcg gtcatgtatc
    12181 tggggattgg cttgtctggt tttgtggcgg tcaatagcct agcggcaggc aatctctccc
    12241 tctttagtat gcttttcttt gtcctcattg cgacggagtt ttttgcaccc atacgggagc
    12301 agggctacgg tatgcacttg gtgatgatga ataccaagat ggcggatcgc atttttggtt
    12361 tcttggacag catgacagcg gagcgggaaa tcgattctgt ccatgtgcct gtttttgata
    12421 gtttgaaact ggaaaatctg gcctttgcct acggagaaaa gccagtcttg aaagatattt
    12481 caatgaccat gacggctggt aaggtctatg ccttggcggg caagtctggt caggggaaaa
    12541 cgaccttggc ccagctgctc ttgggacgct tgcgggcgga taagggagcg atttacttgg
    12601 gtgagcagga gatttcgact gtcagccagt tgtctctgaa tgagcaggtc ctctatgtat
    12661 cgggtcagtc aaccctactc aaccagtcta tctatgataa cttgcggatg gcggttgatt
    12721 ggtccaagga ggatatcttg gcttgggcag atcagcatgg ggtcttgcag tttgtcaaga
    12781 atctgccaga cggtttggat acgattgttg gcgatgatgg tgctttcttg tcgcctggtc
    12841 aacgccagca ggttatctgt gcccgtgcgg ttttggcaaa acgctccctt tatatctttg
    12901 acgaggtgac gtccagcgtc gatcaggaca atgaaggttt gatttatgac ctcattaact
    12961 tggtggccaa ggatgcgatt gttattatta ttacacataa gatgaagcag gtggagcagg
    13021 cagatgatat tctcttcttg tctgcggagg gggctgtgac aggcaaccat gccacgcttt
    13081 atcagactag ctcggcttat ggtcagctgg ttaatcaaca aagagaattg gaggaagccg
    13141 tttatggata agaaagaaat gccaacaggt gtgctgattc cgagactctt gcagtccatg
    13201 aagcacctct tgccacggat tgcggtggcg gtttgttttg cggtcttggg acaggtggtg
    13261 accattgcta ttccagttat gctggtctat ctggcttttg atgcacttgc tggcaatcct
    13321 gctccgctat ggaccttggg agccctcatt ctcctagctc ttttacgtgg tgccttccgc
    13381 tatggtgagc attactttgg tcattatgtg gcctttcata cgctggcggc ctatcgtcgt
    13441 ttgatttttg caaaactgcg ggccctgact cctgggaaat tggatcgaca ggacagcggt
    13501 agcctgctta agatgattgg ggaggacatt gaggccttgg aggttttctt tgcccatacc
    13561 attgccccga tttgtacagg gattttggtg gctcttggct tgacggtcta ttttggtcta
    13621 tctagttggg gtttggcttt tctggctctg gtgacctatg ctcttttagc gattgccatt
    13681 cccaatcgtt ttgctcagca gctgcagccc ttgctcaagg agcaaaatgc cagtcgcaag
    13741 gactatgttt cctactttat tgaaagtctc aagagcatga aggacctcat gcagttccag
    13801 cagacagatg aacgctttgc caatctgacg cagaaaagcc aagaggtcaa tggtcaggag
    13861 cgaaaggtcg cccagaccaa cttcatgcag tatgccgtat ccttcttggt agttggtttg
    13921 tctatcatgg gctttgcctg gctgaccttt gacttggtag gtagtcagag tttggactta
    13981 gcaacaggag tagccctgct ggtttctttc actagctcct ttgctccctt cttggagctc
    14041 agccgtctgc ctcttggttt caagcgagcc atgaatgctg gtcgcaatat ctatgctctt
    14101 ttggatgaaa aagaagcaga gcgaacaggt gagcttgttg aggtcagcgt gacggacatt
    14161 gctatcgagc aactggactt cgactatgat gaccgagaaa cagggctcta tcggaacctg
    14221 tctgtccagt ttgaacaggg gaggattatt ggtttggtcg gtgagtccgg tgcaggaaaa
    14281 tccaccttga tgaaattgat catgcgatgg tatgattggc agcaaggtca aatccgcctg
    14341 tctggcttgg atagtcggaa ggtagataag gctcatttac aaggctcctt tgcctatgta
    14401 ccacaggtgc cacaaatctt ctgccagacc attcgagaaa atcttgtctt gggacggacg
    14461 gatgtgttgg atgaaaccat catggacttg gcagaaaaat gccacatgaa ggaacggatt
    14521 ttggcaacac cgcagggctt ggatacgatt gtggaagcca gtgacttttc agcaggagag
    14581 ggacaacgct tggaactcat gcgggccttg ctcaaaaacg cggactgcta tatctttgat
    14641 gagccaacta gtaatctaga ttcgctcaat gaagcccgct ttatccaact ggttaaggaa
    14701 cattgtcagg gcatggtctt cttgatttct catagaagct cgaccatggc ctgtgcggat
    14761 accattttcc gcttggaaga cgggcaatta gtaaaggaaa agtaaatgaa gaaattacaa
    14821 gtaaaagatc tgatggtaac aggggctttt gctgccctct actttgtttg tgttggtcta
    14881 ggaaccttgt tgagcttggt ttttgatcgt tcgggtaaca tgatgtatgc acctgctgga
    14941 gcagcccttt tggcaggacc tgtttatatg ttattggtag ccaaggttgg taaatttggt
    15001 tcaattagtc ttgttggagc agtaatggcc tgtttctttt tcctatcagg ctatatgaca
    15061 gcggcctttc tgccaagttt gacctttggt tttttggcag aaatggtagc gaagtcaggt
    15121 cactataaac aaaaatggac caatcttttt agctatatca ttttctcttt tggaaactta
    15181 ggacctatta ttcttatgtg gttcatgcga gatgcctatg aggccaatct cttggcacgt
    15241 ggaaaatcag cagaatacat cgctcgtgtc atgcttgatt tcactccaga gaatgtgcta
    15301 tggttgtcaa cgaccattat cttaacagct cttatcagtg gtttgtttgg tcaatatatg
    15361 cttcagcgct attttaaaca atcaggttat ctttcatgaa attagatgct cgtacaaaaa
    15421 ttattctcgt catcttcact agttttacct atgggatgag gcttacaata ttagaaaatg
    15481 cagtgctggt cttaggcctt agcctgcttt tctggttttc tggaaagcgg aaaatggcta
    15541 taatgagtcc gatagcctat tctatttttt gtctgttgtc ctatattaca tttttaccag
    15601 catggctgac gcatttgttg cttgtattga cctatacatg gcctccgctt ttggcaggac
    15661 atctattact gatgacgaca agtggttacg aactcattca tggcttgcgg aaatggcacc
    15721 tgccagaggt atttcttttg acgttgggag taatgtttcg tttcctacct gccattaaac
    15781 aggatgctcg tacgatttgt gcctctttga aggttagagg aattttttta aggaagagag
    15841 atgtggtttg taagccactc cagtacatgg agtttttctt ggttcccttg atgatgtctc
    15901 tcttgcgaac agctcaggaa ttgacagtag ccagtctgac aaaaggtttg gctgtatcta
    15961 cgaaatcacc tgcatatatt cggtcgtctt ggaccgtgct agattggagt ctttgtttat
    16021 gttgtctcgg ttttctgatt ctcgtccggc tgtgacggta aaaaatgtag cattaactta
    16081 ttcaggggca gataaaccag ccttgcagat agaggatctg accattccag aaggccagtg
    16141 tgttgtttta tgtggggaga gtggctctgg gaagtctagt tttctcaagg tgttaaatgg
    16201 tttgacgcca gaatattatc ctgctcagct ttcgggacaa attttcttag gggacttgga
    16261 tttacaaaaa tctagtctgg aagaaatatc ccggcacatt gcttcagtct ttcagcatcc
    16321 gtctactcaa ttttttcata gtcaggtctt gcaggaattg gttttccctt gtgaaaatca
    16381 gggtttgtca agagaagaaa tcgagaatcg cctggcttgg gttatggaat tatttggttt
    16441 ggcttctctt agccagcgaa cgatttccag tctatcaggt ggtcagcaac aacgtctagc
    16501 cttggccgtt gcagccatgc aagggacaga tgtcttggtt ttagatgagc cgactgccaa
    16561 cctagatcag gaagggattg cgattgtaga ggacatcttg aaaactttaa aaagccaagg
    16621 caagaccatt attattgccg agcatagact gtcttatctc agtcaattgg cagatcgcta
    16681 tttatatttt caagatgggc aagtggtgac ggattatcca gccagcgact tcctccatcg
    16741 gacagaagaa tgccgtcagg atatgggact gcgttgttat gactcggagc cttatgggcg
    16801 ggcaatagca gagctggcag accagtttgt taatgataaa gagggtttac ttgttgaaaa
    16861 tttatcggta agtcagaaag agaatactct ctacgagatt gaaaaactct gcttggcacc
    16921 aggacaggtg gtgggtttgg ttggagcgaa tggttctgga aaaacaagcc ttgctcgtta
    16981 tctggtcggt ttagcggaag ataagaagag taggatttct tggcaaggtc aaatcttatc
    17041 tagtcgccag agattggaaa aaacagcctt tgttatgcag gatgttcgac tccaactatt
    17101 tgcggaaagt gttgagcgag aacttactct tgggaggaaa aatagagctg tcgatgaaca
    17161 tttggtagct cgttttggcc tatcggattt gttggagaga catccggtca gtttatcggg
    17221 tggtgaacaa cagcgcgtga tgatagtagc tagcttactg gcagataagg aaattttcat
    17281 ttttgatgaa ccgacgagcg gtttggattt gagacgaatg cagcaagttg cttccgcttt
    17341 agtagactta aaaatgaaga ataagttggt tttgttaatt tctcacgatg aagagctatt
    17401 gaatctggtt tgtgataaaa tagtagatat taaacagttg aaatagtgat tatgaacaaa
    17461 caaacctata aagaaatttt aaccattgcc tttccagcca tgggggaaaa ccttctccag
    17521 atgttaatgg gggtagtaga ctcttatcta gtagccagta ttggcatcgt agccttgtct
    17581 ggagtttccc ttgctaataa tattttagcc gtctatcagg cggtttttat tgccctagca
    17641 gcagcggtgt cttctcgttt ggctcaggct ttgggtgaag ggggttcaga aggcattgga
    17701 ggaactgcta gtgaaagtgt caagtttaca gtttttatcg gtctcctttt aggaattttt
    17761 tcagttctgg caggtccaat agtacttact agcttggggg cagagtcaga agtggtacag
    17821 gctggaggtc tttatttgat attggttggt gggggagcac cttttttggg actcatgaca
    17881 agtttgagtg caatcttacg aaccttgggg gaaccacgtt ttcctatgta tatcagcctg
    17941 ctctcaaacg ttctaaatgc actattttca gcatttgcag tctttgtgct tcatgcaggt
    18001 gtagctggag ttgcgattgg cacggtctta tcgcggttga ttggttgtag cctgctttgg
    18061 tctcgcttac caatttcttt aaaaccatgg acctggtcct ttgataaaga actgcttaga
    18121 cttgccctgc cagcaactgg tgaacggttg atgatgcggg ctggagatgt ggtggttgtt
    18181 gccttgataa ctagccttgg aacagcagtt gtagcaggca atgctattgg agaaacgcta
    18241 acccagttta actatatgcc agccatgagc attgctacag caaccattat tttgacggct
    18301 caacatcgac aggatcagtt agcggttcaa aggattttta aaacgagttt gcacctatca
    18361 ctcatattta tgcttttgat ggcggcaacg acttattttg caggtccgtt tttgaccagt
    18421 ctgtattcaa gagagcctca agtagttcaa gccagtcaga cagtcctact ctattctatg
    18481 ctcggagttc ctgttacagc agctaccctt attttaactg ccttgtggca gggcttgggc
    18541 aatgccaagc tacccttcta tgcaactagt ttagggatgt ggctggtccg cataggtctt
    18601 gcttatttgc ttgtaggtat ctttcagttg gggttgcagg ccatttggat agcaaccata
    18661 gtagacaatg cctttcgtgc aggacttttg tatgttcaat ataagagggt aggaaaagtt
    18721 aaaacggatt aaggaatatc taagaaaact ttcagtttcg tttaagtttg tagatatata
    18781 ctatcatcaa gctagaaata gcgaaattct ttttcatata atctcctaga agacagtcga
    18841 ctgcggtcgg ctgttttcgt gtttctatgt gttttgaaaa ttttatccat ttacatggaa
    18901 atttatggtc gtttagacaa tacctttg
//
LOCUS       DASFQS010000039        18865 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.039, whole genome shotgun sequence.
ACCESSION   DASFQS010000039 DASFQS010000000
VERSION     DASFQS010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18865
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.039"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            91..642
                     /locus_tag="U1041_001127"
     CDS             91..642
                     /locus_tag="U1041_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1836 domain-containing protein"
                     /protein_id="HEM4768240.1"
                     /translation="MKQTIPYWHELPDLDLYLDQVLLYVNQVVNSQESLEQKSLYSMK
                     INSSLGNEADDRTGVHQGKLTTDNVDIRRVLTAAMINNYVKHKQIEKPVKKKYQKQQV
                     ARLIALTILKNVFSIQEISQTLNLLLQSSNSETLYNHFVDCMRNEENEETPDIIRYAC
                     QSIKLYYKTRQLTMELERSHHES"
     gene            632..1282
                     /locus_tag="U1041_001128"
     CDS             632..1282
                     /locus_tag="U1041_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEM4768241.1"
                     /translation="MNPSLKLSLQLSFGEEVANSVTHAVGALLMLILLPITAIHSFQD
                     YNVTAVVGMSIFVISLFLMFLSSSIYHSMPYASTHKYILRIIDHSMIYIAIAGSYTPV
                     ALSLVGGWLGYLIVGLQWGLTIFGILYKIFAKKINEKFSLFLYLFMGWLVVFILPAIL
                     QKTGLIFGILMLAGGLSYTIGALFYAKKKPYFHMIWHLFILLASALQYIAIVYFML"
     gene            complement(1315..2325)
                     /locus_tag="U1041_001129"
     CDS             complement(1315..2325)
                     /locus_tag="U1041_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM4768242.1"
                     /translation="MTVFFWLFLAAIGLFALVYFWERRSIFISLFALNILIWALAWIV
                     STGILENNEILRLLAIALAMLLALAFLSGPFVLLITLYLNGFRILKREGVRFHNFLSL
                     GLAIGLTFYLFIAPSVASTLSGISFFNMVFVYVGFLVSYAIIISMLYTTSSFINLVNL
                     LPGKLDYVVVLGAGLIGDKVTPLLASRIDKGIAIYQKQPGSKLIMSGGQGPDEIIAEG
                     QAMANYALEKGVPAEDILIENQSTNTEENLKYSYALMKPGSRFALVTNYYHVFRALLL
                     ARKLKIKCIGYGAKTKFYFSLNAFIREFVGYVVMSRKTHLVFLSIVSALYLIGVIISL
                     MY"
     gene            complement(2328..3101)
                     /locus_tag="U1041_001130"
     CDS             complement(2328..3101)
                     /locus_tag="U1041_001130"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEM4768243.1"
                     /translation="MATIKEVTALLTQVDSLDSPVWADLAQDDRAGVQVAIKKRRKEL
                     EKEAAEDVRLEAMLFYEKALYENGVEFIAGIDEVGRGPLAGPVVAAAVILPKGCKIRY
                     LNDSKKIPKSKHEAIYQEVMERAVAVGVGVKDAAVIDQVNIYEATRLAMLEALGQLSR
                     EPEHLLIDAMKLDTPIPQTSIIKGDANSLSIAAASIVAKVTRDKMMADYDKEFAGYGF
                     AKNAGYGTAEHLEGLNKLGITPIHRKTFEPIKSMLAGGN"
     gene            complement(3088..3939)
                     /gene="ylqF"
                     /locus_tag="U1041_001131"
     CDS             complement(3088..3939)
                     /gene="ylqF"
                     /locus_tag="U1041_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002962311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEM4768244.1"
                     /translation="MAIIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPM
                     LTKIVGDKPKLMILNKVDLADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAK
                     SLMKEKIERLRERGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQ
                     WLKSNKDLEILDTPGILWPKFEDQEVGLKLALTGAIKDQLLPMDEVTIFGLDYFKANY
                     PERLQERFKGMDLEQETPELIMDWTKKLGFRDDYDRFYNLFVKDVRDGRLGTYTLDKV
                     SDLDGND"
     gene            complement(4031..5551)
                     /locus_tag="U1041_001132"
     CDS             complement(4031..5551)
                     /locus_tag="U1041_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4768245.1"
                     /translation="MFYKRRETKTGKIRFEVGDSYKDPLTGKWKTASVSYYKDTSSAR
                     KKAEFELQEKIENLLNVTQSKINVETILTFKDLREAWFESWCVSVKKQTADREKLVLK
                     RLGEIIGDDYLLTSIKPLLLEKILKDYIRIYDCSASTFSHIRSSLNKILNYGVLHQIY
                     QYNPLLAVKINVSKSKKRKAKLRKKMQFLEVHELLVFFEELSKRRNPNYYDLAIFLLF
                     TGIRIGEAGAVVESTVDLEKAILDVSRSLQSHDLKVDDFYYDETKTDESERYVRLPQI
                     AIDAYLRALHRSKEFDKYMLKNPKKSFRKSSSVFRTEYGSPITSHSFREIISRIETDL
                     KKNCMERYGFEWKKHVTPHSFRHMHITYLQRGDVPVPLKEIMERVGHVNPETTMGYSH
                     STIESQNLSIIVMEKFALDNNFNFKDLKIWKCKYSQSVFELIEENIEQKSLECSLSTF
                     RTLIGINESYAPRHITANILPRVKEDISKYIDHFEIITIRKQDTSQKVDGYKFVWG"
     gene            complement(5641..5880)
                     /locus_tag="U1041_001133"
     CDS             complement(5641..5880)
                     /locus_tag="U1041_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEM4768246.1"
                     /translation="MTKVVKIKYIPVENSIAEWATKKCLIKRWDGLNIHTLNRWLSEM
                     RENKKFKHYVINPTHKLVFINLDGFEEFLTWKEKN"
     gene            complement(6207..7100)
                     /locus_tag="U1041_001134"
     CDS             complement(6207..7100)
                     /locus_tag="U1041_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM4768247.1"
                     /translation="MAVKYALGVDIGGTKVAVGLVNDTGHVAYSLKVPSNKESSETLF
                     QCVCTAIRELLNSQQLNIEDISGIGVGLPGKVDVENGIAVFQNNIPWENFPVVKRLQE
                     EFGNIPIKIDNDVKVAAYAEYRLLSLEANDMFGYITISTGIAATNIINNTILRGSGFA
                     GEIGFMPVRSFGRTSGLEISCSGPAIERQGKQMYGEDLSTKAVFDNWRKGDITASAII
                     ANARDGMVQAIHNMICLLDPKIIVLGGSVAQNNPDFIDDIKTVLRLSLHHEQKHILNN
                     VIISKIDSGNNGIIGSAFLVQ"
     gene            complement(7102..8979)
                     /locus_tag="U1041_001135"
     CDS             complement(7102..8979)
                     /locus_tag="U1041_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-N-acetylgalactosaminidase"
                     /protein_id="HEM4768248.1"
                     /translation="MKIENKNVARYFKLEDGKFYTSHILNKKVDEPIGNEKCTEFVVY
                     FCDGSQLSSEDFTAHVVEQTNESLLVSFYHSEIQLTIFYSKREDVLVKEVTILSSINT
                     INYIDVERFSFTNLEHVYLPKKQEDIKEMAGFSGYYVELGQPIYAKSFFLGMEFPMGE
                     NRIEDQTYFSRYYVGHEIKEPKKIWPVVIGASSGFEKPSIQKDFFTYIRGIAQPSYFR
                     KQYNSWYDHMTAIDEGIIVKSFEEISHGFEDNGVKLDAYVVDDGWCDYQSVWEFNEKF
                     PNGLTKVKALVNNLGASLGLWIGPRGGYNGTEVIMSDWLEAHPEFGSKNALSNDVNIG
                     DFKYLEGMKQKMLDYQKKYDISYWKIDGWLLKPDKPDSSGEFAMHTMIPVYEFLIDLL
                     KDLRAERGDRDCWLNLTSYVNPSPWFLQWVNSLWIQISQDVGFTENAGNDIQRMITYR
                     DCQYEEFLTKRDIQLPLWSLYNHEPVYASTAHTWYMDHQMYASVEEFEDYLMFISTRG
                     NAFWEFHYSYTMFDEERWKANARAVKWIGNNYSTLKHSQTIGGKPSAFEIYGYRCIDE
                     EAGKEILSLRNPASHSATIQLDNINLSDYQLVRGDYTALTETEYELAPYTILIAEKVG
                     K"
     gene            complement(8969..10303)
                     /locus_tag="U1041_001136"
     CDS             complement(8969..10303)
                     /locus_tag="U1041_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003066419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HEM4768249.1"
                     /translation="MTKNSLQEINKRTEWFRKDRFGMFIHWGLYSIPGKGEWIRSHQQ
                     LSIDDYEPYFEAFNPVKYNPREWAKAAKAAGMKYMVLTAKHHDGFCLFDSAYTDYKST
                     NTQIRKDLVAEFVESVREEGLKVGLYFSLIDWYHPDYPKYGDMIHPMRENEAFKDEKI
                     DFDNYLTFLHNQVEEIVTKYGKLDILWFDYSYGEMFGEKWRATDLINLVRKHQPDVVV
                     DNRLETSGEGFGSIVTDEINIYSGDFVSPEQLIPHEGIRNIHGEPIPWELCLTMNNNW
                     AYNPTDHFYKSSKTLIRKLVECVSKNGNMILNVGPDALGVINQESQDILTDFGKWLDK
                     NGESIYGCGVSSLPKPEWGYYTQKGNTVYAHVFEQPIGPLALIGIDESKVKRMSFLHD
                     GSEVKISKSWTTNAYEGICFAQYGDIPHFTYPLPDSIDSVIKIELVGDDSED"
     gene            complement(10300..11139)
                     /locus_tag="U1041_001137"
     CDS             complement(10300..11139)
                     /locus_tag="U1041_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001819555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4768250.1"
                     /translation="MDNRLNGLSKSGKLIIYIYMAITCLISVFPILWIFLSSLKADPM
                     KNPGISLPTDLSFDGYIKVFTELHVLDYFWNSFKVVSISVIISIIMISMSSYVIARMD
                     FRGKKLITAMLYSTLFIPATAMTFPVYRLVNVLGIYNTPVALIFVYSCSGIAMSFFII
                     KNYFAIIPKELEEAAEIDGASYAQTFWKVMLPIARPGILTAAILAFINNWNEYYWASM
                     LIINKDELTVPALLGQFTTSFNTNYNGLFSAIVVIILPPILLFAFASKYFIEALGGGA
                     VKG"
     gene            complement(11150..12070)
                     /locus_tag="U1041_001138"
     CDS             complement(11150..12070)
                     /locus_tag="U1041_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4768251.1"
                     /translation="MAKKTMTLQNRKAQKQRFIFLFLLPTLVCFFLFYFYSVVTIFAT
                     SFTKWDYTNLTSPEFLGFGNLFANYKYIFSEYPFFLEALKNSITWAIIGVVVQVPLAL
                     SVAIALSKKLAGWKLSRNLYIIPSIISSAAMGLIFLQIYNPNYGVVNQVIRFFNPEFS
                     DAILLTPGLNIIAMTCAYIFFAGTSTIMILGQIFAIPQEIHEAAILDNITGWRREWYI
                     TIPMIKETLKTVSIMAATSGFLLYNEVFFLTNGAAGTKSISFIIRELAVSSSRTQYAR
                     ANTIGVIQILGGMLIILCINLIFKEGKRRK"
     gene            complement(12125..13423)
                     /locus_tag="U1041_001139"
     CDS             complement(12125..13423)
                     /locus_tag="U1041_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4768252.1"
                     /translation="MKKSLLKCGALCLFASVILAACGSSSGTSSSTEKASGGDDTVLE
                     FYHGYHHSEEEWPAAKVMRDLYDEFAKKHATGDVEFKPTPVNGSLTDIMNNKVASGEF
                     PDMIDLAGNDVSLAAIEQSLVLDLKPYIDDNGLEKNVGLNYTQNDVNGKIYTVHDQLL
                     TLGLWYNADIFSKAGAKTPDQWTKWSDFTEAMALVRKQGVYAFGAGEPAIRLFNTVLG
                     SSEAGSKLLEGPLTSEGIDSKEFAEALKLVMTEVQANGSANAGGDANVYSTDFTENKS
                     AVFFNGVWAAGGLKDNAALKPGLYAGNVAISSAGGGITISSKLSEEEEKLALEFVKYM
                     TSDEVQTTIFEKVGANPASQAIDTAQIASGSDDATVKLLGEATSMANNADVTVPTVVS
                     VWGGDVRTAIINALTESAADGVNIDQKVKETQDILKALIG"
     gene            complement(13440..14078)
                     /locus_tag="U1041_001140"
     CDS             complement(13440..14078)
                     /locus_tag="U1041_001140"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001286141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HEM4768253.1"
                     /translation="MEKERKELIKYGKKLVTEGLTKGTGGNLSVFNREKGLMAITPSG
                     IDFFEIKEEDIVIMDLEGRVVEGEKLPSSEWYMHLIQYQQREDIDAVIHAHTTYGTVL
                     AVIREPLPASHYMIAVAGKDVRVAEYATYGTKELAENAAEAMKDRRAVFLANHGILAG
                     AQDLLNAFNIIEEVEYCSKIYCVAKSMGEPVILPDEEMELMAEKFKTYGQRK"
     gene            complement(14099..15886)
                     /locus_tag="U1041_001141"
     CDS             complement(14099..15886)
                     /locus_tag="U1041_001141"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HEM4768254.1"
                     /translation="MTLYPKIGIRPTIDGRQGGVRESLEEKTMQMALAAKDLIESNLR
                     YADGTPVQCLLASRTIGGQGDAGVVYDEFARDNVVATLSVTPSWCYGTETMDMDPHTI
                     KAIWGFNGTERPGAVYLAAAMSGYAQKGYPAFKIYGHDVQDLDDNSIPADVAEKILLF
                     AKGAIAAGQMKGKSYVNIGASSMGIAGSQVTTSFFEDYLGMLVEFVDMTEILRRMELE
                     IYDKEEYEKALAWIKEYCKEGVDINAGKEFPEVITKSKVIPADKDWEFIAKQTLIIRD
                     ILFGNPRLAEIGWEEEARGRNAISGGFQGQRQWTDWLPNGDFAEAILASTFDWNGPRP
                     VTAFATENDTLNATAMLFGTLLTNKAPIFSDVRTYWSPEAVKRVTGQELTGRAKDGIL
                     HLINSGASALDGSAAARDEAGQPTMKEFWNMTEEDIKACLEATDWCRANYEYFRGGGY
                     SSHFKTQGELPVTLIRVNLVKGVGPSLQIAEGYTCPLDDEVHRILDERTDKTWPTTWF
                     APNLGESGFETVYDVMNHWGSNHGAFVHGHIGAEVITLASMLRIPVALHNIPRERIFR
                     PSIFDGVGTKDLEAADFKMCEVLGPLYSK"
     gene            complement(15870..17297)
                     /locus_tag="U1041_001142"
     CDS             complement(15870..17297)
                     /locus_tag="U1041_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HEM4768255.1"
                     /translation="MKTVLAIDLGATSGRGILYSIENGKLISREVHRFNNSIQKVKGR
                     LCWDIESLVKSVKKCIRMSQEQSELSSVGIDTWGVDFTLLDVNGEMIAQPVSYRDRRT
                     ESILDEIARYSSLNDLYFKTGNQLMEINTLFQLIACKFQTPEEYFKADKLLMISDYLN
                     FVLTGEVAIERSIASTMQMINPLTQDWNHEILKTFEISELLLPKLVSEGNILGNISDE
                     ILNNEITVINVCQHDTASAVAAIPHEEENLLYVSCGTWSLIGTELKAPILTDSALKYN
                     FTNEAGYDGTTRFLKNCTGLWIIEELKKSFLKLGKDFSYDEITEMVNNVESCVPTFDT
                     DASTFASPGNMIEKIVCYFSDEGIKVSTDPAILFKIVYQSLAEKYKEVIIQLEEITGN
                     IYKRIDLIGGGSKSEYFSQLVADVTGKTVVTGLYEATSIGNALVQFKALGYVEDMKEA
                     KKLVKESITFNHFYPKKEEKNDTLS"
     gene            17456..18223
                     /locus_tag="U1041_001143"
     CDS             17456..18223
                     /locus_tag="U1041_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000588554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM4768256.1"
                     /translation="MSRDKRLKEITNILHSRKRIDVKQLEKLTFSSTSTLRRDLIYLE
                     EQGLIKRKHGEVVLNAFNTVELAHSIRETENRSEKKIIAELAKDFVGPGMCMYLDSST
                     TVYELCPFLSTIDNLIIFTNGLNTAQLLSELSNPTMKIFVTGGEVKHHSASVVNHSME
                     NSLLEHFSIDLAFCSARGIDEEYVYEASFSQAIAKKSIIDKAKETILLIDSSKFRISG
                     FFKINNLKQYKTIISDKLPDESLLTSAEKYEVEWIAD"
     gene            18400..18744
                     /gene="mobC"
                     /locus_tag="U1041_001144"
     CDS             18400..18744
                     /gene="mobC"
                     /locus_tag="U1041_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HEM4768257.1"
                     /translation="MEKRTRPNQLKIRLSDKELSQVRQKYGQSRSKSMRHFVLKCILE
                     TSIYEVDMQPFRELQHLLSKTSTNVNQIAKKVNTYSLVYKEDITTIQNEILFFNVIVK
                     CNKKQYICNIMY"
BASE COUNT         5648 a         4080 c         3182 g         5955 t
ORIGIN      
        1 ttcggaaagg aagcatcctt tttctttact ttattttttt aaaattatat aatctagtta
       61 tcattactag ataaaagaga gtagataata atgaaacaaa ccatccccta ctggcatgaa
      121 ctgccagact tggacctcta tttagaccaa gttctgctgt atgttaatca agtagtcaat
      181 tctcaggaaa gccttgaaca gaagagttta tactcaatga aaatcaacag tagcctagga
      241 aacgaagccg atgatagaac tggggttcat caaggcaagt tgacaacgga taatgttgat
      301 attcgaagag tattgactgc tgccatgatc aataactatg tcaaacataa acagattgaa
      361 aaacctgtta agaaaaaata tcaaaaacag caagttgccc gcttgattgc cttgactatc
      421 ttaaaaaatg tcttttcgat tcaagaaatc agtcagacct taaatcttct tctccagtct
      481 agcaattcag aaaccttata caatcatttt gttgactgca tgcgaaacga ggaaaatgaa
      541 gaaacgcctg acatcattcg ctacgcttgt caatccatca aactctacta caaaacccgt
      601 caactcacta tggagttaga aaggagtcac catgaatcct agtttaaaat tgagcctgca
      661 actatccttt ggagaggagg ttgctaacag tgtcacacat gcagtagggg ccttgcttat
      721 gctgatttta ctccctatta ctgctatcca ttcttttcaa gattataacg tgacagcggt
      781 agtcggcatg tccatctttg ttatcagtct ttttctcatg tttctgtcat cctctatcta
      841 ccactccatg ccctatgctt ctactcacaa atacatcctg aggattatcg accatagcat
      901 gatttacatt gccattgccg gaagttacac acccgtcgcc ctatccttag tcggtggttg
      961 gctgggctat ctgattgttg gtttgcagtg gggattgact attttcggta tactctataa
     1021 aatttttgct aaaaaaataa acgaaaaatt cagcctcttc ctctatcttt tcatgggctg
     1081 gttggttgtc tttatcttgc cagccattct tcaaaaaact ggacttattt tcggaatttt
     1141 gatgctggct ggtggactat cttatactat tggagccctc ttctacgcca agaaaaagcc
     1201 ctactttcac atgatttggc atctctttat cctactagct tcggcacttc agtatatcgc
     1261 cattgtctac tttatgttat aagaaaacag cttctaatca cctagaggct gtttttaata
     1321 cattaaactg atgatcactc caatcaagta aagggctgac acgatgctca aaaagaccaa
     1381 atgcgtcttt cggctcatga ctacatagcc tacaaattcc cgaatgaagg cattaaggct
     1441 aaagtaaaat ttggtttttg cgccatagcc gatacatttg attttcaatt ttcgggccaa
     1501 tagcagagct ctgaaaacat gatagtaatt ggttacaagt gcaaatcgac tgccaggttt
     1561 catcagggca taggagtatt tcaaattttc ttctgtgttg gtcgattggt tttcaatgag
     1621 aatgtcttca gcaggcactc ctttctccaa ggcataattt gccatagctt gaccttcagc
     1681 tatgatttca tcaggacctt gtccgcctga catgatgagc ttactgccag gctgtttctg
     1741 gtagatcgct atgcctttgt caatccgcga agccaaaagt ggtgtcacct tgtcaccaat
     1801 caatccagct cccagcacca ccacataatc cagcttccct gggaggagat tgaccaaatt
     1861 gataaagcta gatgtcgtat aaagcatact gatgataatg gcataggaca ctaaaaatcc
     1921 aacatagaca aataccatat taaaaaaact gataccagaa agggtgcttg ctacagacgg
     1981 cgcgataaag agataaaaag ttaagccgat agccaatcct aacgataaaa agttatgaaa
     2041 acggacacct tctcgcttca aaatccgaaa accgttcaga tagagggtaa tcagcaagac
     2101 aaatggacca cttaagaagg ctagagccaa taacattgcc agagcgattg ccaataaccg
     2161 caagatttcg ttattttcta aaatacctgt tgaaacaatc caagccaaag cccagatgag
     2221 gatgttcaag gcaaataggg agataaaaat cgaccgtcgc tcccagaaat agacgagagc
     2281 aaatagaccg atagccgcta aaaataacca gaaaaagact gtcaagacta gtttcctcct
     2341 gctagcatag acttaatggg ctcaaaggtc ttacggtgaa tgggcgtgat gcctagcttg
     2401 ttcaagcctt ctaaatgctc tgccgttcca tagccagcat tcttggcgaa gccatagcca
     2461 gcgaactcct tgtcatagtc cgccatcatc ttatcccgcg tcaccttggc aacgattgaa
     2521 gctgctgcga tagacaggct attggcatcc cccttgatga tggaagtttg cggtatgggc
     2581 gtatccaact tcatagcatc tatcaagaga tgttcaggct ctcgactcaa ctgccccaaa
     2641 gcctccaaca tagctaacct ggtcgcctcg tagatgttga cctggtcgat aacagctgca
     2701 tctttgacgc ctacaccgac tgctaccgct cgctccatga cttcttggta gatggcttcg
     2761 tgcttggact tagggatttt tttggagtcg ttgaggtagc ggattttgca ccctttgggc
     2821 aagatgaccg ccgctgccac cacaggacct gctagaggcc ctcggccgac ttcgtcgatt
     2881 ccagcaatga actccacccc attttcataa agggcttttt cgtaaaatag catagcttct
     2941 aagcggacat cttctgccgc ttctttttcc agctccttac ggcgtttctt gatggcaacc
     3001 tgaacccctg ctcgatcatc ctgagctaag tccgcccaga cagggctgtc tagactatct
     3061 acctgagtca gcagagcagt cacttcctta atcgttgcca tctaagtcac tcaccttgtc
     3121 caatgtatag gtgcccaaac gcccgtctcg aacgtccttg acaaagagat tgtaaaaacg
     3181 atcataatca tcacggaagc ccagtttctt ggtccagtcc atgatgagtt caggcgtttc
     3241 ctgctccaaa tccatgccct tgaaccgctc ttggaggcgt tctggataat ttgccttgaa
     3301 atagtccaaa ccaaaaatgg tgacttcgtc cataggcaaa agttggtcct tgatagcccc
     3361 agtcaaagcc aacttgagac cgacttcttg gtcttcaaac ttaggccaga gaatacctgg
     3421 tgtatcaagg atttcaaggt ccttgttgga cttgagccac tgctgcccct tggtcacacc
     3481 tggtttgtta ccgacaacgg caatcttctt cccagccaga cggttcatga gggtggattt
     3541 tccagcgttt ggaataccga taatcatggt ccgcagggtt tctttttgaa tgcctctctc
     3601 gcggagacgt tcaatcttct ctttcatcag actcttagca gcgtcggtca cctttttcac
     3661 cgtcgcttgc tcttttgagt tgatggcaag ggtgcgaatg ccctgacctt caaagtagct
     3721 ctgccattct tttgtacgaa cagggtcagc caaatcgacc ttgttgagaa tcatgagctt
     3781 gggcttgtcg ccgacaatct tagtcaacat gggattttgg ctggataggg gcagacgggc
     3841 atcgaccaaa atggtcacga aatcaacgtg cttgatgttc tcctgcacct gcctgcgagc
     3901 ttttgacatg tggcccggaa accattgaat aattgccatg tagtaaaaat cctttcgtag
     3961 caagggtttg aggcccttgg tttttaaaaa tgcacaaaaa accaaaaata aaccaaaaat
     4021 ttaaataaaa ctatccccaa acaaatttat agccatcaac tttttgactt gtatcttgtt
     4081 tcctgatagt aatgatttca aaatggtcaa tatattttga aatatcttct tttactcttg
     4141 gcaatatatt ggctgttatg tgtctaggtg cataactttc atttattcct attagcgttc
     4201 taaatgtact caaagaacat tccaaacttt tttgttcgat attctcttcg attaactcaa
     4261 atactgattg cgagtattta catttccaaa tttttaaatc tttaaaattg aagttgttat
     4321 ccaatgcaaa tttttccatc acaataatag atagattttg agactctata gtactatggc
     4381 tatagcccat agttgtttca ggattcacat gtcccacacg ttccatgatt tccttgagag
     4441 gaacgggtac atcccctctc tgaagatatg taatatgcat atgtctaaag gaatgtggcg
     4501 ttacatgttt tttccactca aatccatatc gctccataca attctttttc aaatctgttt
     4561 caattcttga tatgatttct ctaaaagaat gtgaagttat aggagagcca tattctgtcc
     4621 taaatacaga tgatgatttc ctaaatgatt ttttaggatt ttttaacata tacttatcaa
     4681 actctttact tctatgcagc gcccgtaaat aagcatcaat tgctatttgc ggaagacgaa
     4741 catatctttc agactcatct gtttttgtct catcgtaata aaagtcatct acctttaagt
     4801 catgtgactg caatgaacgt gaaacatcta atatagcttt ttctaaatct acagttgatt
     4861 ctacaacagc tcctgcttcc ccaattcgaa taccagtaaa taaaagaaaa attgctaaat
     4921 catagtagtt tggatttctc ctcttgctaa gctcttcaaa gaagaccaat aattcatgaa
     4981 cttctaagaa ttgcattttc tttctcaatt ttgctttacg tttcttactt ttggatacgt
     5041 ttattttaac tgctaaaagt ggattatatt ggtaaatctg atgtaacaca ccgtaattta
     5101 gaattttatt caagctactt cgaatatgtg aaaacgttga agccgagcaa tcataaattc
     5161 gaatatagtc tttcaaaatt ttttccaaaa gtaacggttt tattgaggtt agaagataat
     5221 cgtcacctat aatttcaccc aatcttttca gtaccaattt ttctctatct gctgtttgtt
     5281 ttttgactga gacacaccac gactcaaacc aggcttctct caaatcttta aatgtgagta
     5341 ttgtctcgac attaattttt gattgagtaa cattgagtaa attttcaatt ttttcctgta
     5401 attcaaattc tgcttttttt cgtgcagagc tagtatcctt atagtaagaa acagatgctg
     5461 ttttccattt cccagttaga ggatccttgt aagaatcacc aacttcaaat ctaatttttc
     5521 ctgtttttgt ttcccttctt ttataaaaca ttctgaactc tctttctttt taaaagagaa
     5581 aatatgatag ccaatagaat taactcactc tattttatca catcttcgga aaattatcgg
     5641 ctaatttttc tctttccaag taaggaactc ttcaaatcca tctaaattga taaataccag
     5701 tttatgagta ggatttatta catagtgctt aaatttttta ttctctctca tttcagaaag
     5761 ccatcgattt agtgtgtgta tatttagtcc atcccacctt tttatcagac attttttggt
     5821 agcccactct gcaatactgt tttcaactgg tatgtacttt atttttacta cttttgtcat
     5881 tatttcctcc tcaaaagata agtagcaaaa aaattgagac aagtttcatg acattggtgg
     5941 gttgattcgg acatcaacat aggaatctca cctgctccat ttttcgacta gagcctgaac
     6001 gttcagaagt atcattacac tctctttgta aatttatttc ctccccattt agtaagtgaa
     6061 taattccatt gctggtttca ctttaaaaaa aaaagagcaa aatttcatga tttacatctt
     6121 gaaattttgc tcaattttta ttacttaact attatgttta acagttgata ttcaattctt
     6181 caaatttcct actagcatct tttatattat tggactagga acgcagaacc aattattcca
     6241 ttatttccac tatctatttt tgagatgata acattattca aaatatgttt ttgttcatga
     6301 tgtaaagata gtcgcaaaac tgtctttatg tcatcaataa aatctgggtt attttgtgca
     6361 acactaccac ccaaaacgat tattttagga tccagtaaac aaatcatatt atgaatcgct
     6421 tggaccatgc catctctcgc attagcaata atagccgatg ctgtaatatc acctttacgc
     6481 caattatcaa acactgcctt ggttgacaaa tcttcaccat acatttgctt tccttggcgt
     6541 tcaatggctg gtcctgagca ggagatttct agaccacttg ttcttccgaa acttcgaact
     6601 ggcataaatc caatttcacc cgcaaagcca gaacccctta gaattgtgtt atttatgata
     6661 tttgtagctg cgataccagt agaaattgtg atataaccaa acatatcatt ggcttctaga
     6721 gacagtaatc tatactcagc atacgctgct actttcacat cattgtcaat ttttattgga
     6781 atatttccaa attcttcttg aagtcgctta acaacaggaa aattctccca tggaatatta
     6841 ttttgaaaaa ctgcgattcc attttcaaca tcaacttttc ccggcaagcc aacaccaatc
     6901 cctgaaatat cctcaatatt cagttgctga ctgtttagta gttctcgaat agctgtacac
     6961 acgcattgaa ataaggtttc tgacgactct ttattgctcg gcacctttag actataagcc
     7021 acatgacctg tatcatttac cagtcctaca gcaacttttg ttccaccaat atctacacct
     7081 aaagcatatt ttactgccat gttattttcc taccttctct gcaatcagaa ttgtatatgg
     7141 agctagttca tactctgttt ctgtcagagc tgtataatct cctctaacca attgatagtc
     7201 ggaaagattg atattatcta actgaatagt cgctgaatga ctagctgggt tccgaagcga
     7261 aagaatttct ttccctgctt cttcatcaat acatctgtaa ccataaattt caaacgctga
     7321 cggtttgcca ccaatcgttt gactatgttt tagtgttgag tagttgttcc ctatccactt
     7381 gactgcacga gcattggcct tccatcgctc ctcatcaaac attgtatagg aataatggaa
     7441 ctcccagaaa gcattcccac gagtggaaat aaacattaga taatcttcaa actcttctac
     7501 actggcatac atttgatggt ccatgtacca ggtatgagcc gtactcgcat agacaggttc
     7561 atgattatat agactccaaa gaggcaattg aatatctcgt ttggttaaga attcttcata
     7621 ttggcaatca cgataggtaa tcatccgttg aatatcattc ccagcatttt ctgtaaagcc
     7681 aacatcctgc gaaatttgta tccaaaggct gttgacccat tgtagaaacc atggactagg
     7741 gttgacataa gaagtcaagt ttagccagca atctctatct ccccgctccg ctctcaagtc
     7801 ttttaagagg tcaattaaga actcatagac aggaatcata gtgtgcatgg caaattcacc
     7861 actagagtct ggtttatctg gcttcagcaa ccaaccatcg attttccagt agctgatgtc
     7921 atatttcttc tggtaatcca acattttttg cttcatgcct tccaaatatt taaaatcacc
     7981 aatattgaca tcgtttgata aagcattctt gctaccaaat tctgggtgtg cttctaacca
     8041 gtcactcatg ataacttctg taccgttata acctccacgt ggtccgatcc aaagaccaag
     8101 gctagcaccc aaattattta cgagagcttt tacctttgtt agaccgttag ggaacttttc
     8161 attgaactcc caaacacttt ggtaatcaca ccagccatca tcaacgacat aggcatctaa
     8221 cttcacacca ttatcttcaa agccatgtga aatttcttca aaacttttta caatgattcc
     8281 ttcatcaatg gcagtcatat ggtcatacca agaattgtat tgttttctga aataacttgg
     8341 ttgggctata ccacgaatgt aagtaaagaa gtctttttgt atacttggct tctcaaaccc
     8401 agatgatgca ccaataacaa ccggccagat tttcttaggt tctttaatct cgtgtccaac
     8461 ataatagcga gaaaaatagg tctggtcttc tatcctattt tcccccattg gaaattccat
     8521 gcccaagaag aaagacttgg cataaattgg ctgtcccaac tctacataat aaccagaaaa
     8581 tccagccatt tctttgatat cttcttgctt tttaggaaga tagacatgtt ctaaatttgt
     8641 aaaactaaac cgttccacat caatatagtt gattgtattt atggatgaca gaatcgtcac
     8701 ctctttgaca agaacgtctt cacgttttga ataaaatatg gttaactgga tttctgaatg
     8761 atagaaactc accaaaagac tttcattggt ttgttcgact acatgagctg taaaatcctc
     8821 agagctgagt tggcttccat cacagaaata aacaacgaat tccgtacatt tttcgttccc
     8881 aataggctcg tcgacctttt tattcaagat atgggaagta taaaacttcc catcttctaa
     8941 tttaaaatag cgtgctacat ttttattttc aatcttcact atcatcacct actaattcaa
     9001 tttttatcac actatcaatg ctatctggca atggataagt aaagtgagga atatcaccat
     9061 actgtgcaaa gcaaatccct tcatacgcat tagtggtcca actcttagaa atcttcactt
     9121 cacttccatc atggaggaaa ctcattcttt tgactttgct ttcatcgata ccaatcaggg
     9181 caagagggcc aattggctgt tcgaagacat gagcatacac cgtgttccct ttttgagtat
     9241 agtagcccca ttctggttta ggtaatgaac taacgccaca accataaata gactcaccat
     9301 tcttatctaa ccattttcca aaatcagtta aaatatcttg actttcttga ttgataacac
     9361 ctagtgcatc tggacctaca ttcagaatca tattcccatt cttacttaca cactcaacca
     9421 acttacgaat aagtgtcttg gacgatttgt agaaatgatc cgtaggattg taggcccagt
     9481 tattattcat tgttaagcaa agttcccaag gaattggctc tccatgtata tttcgaattc
     9541 cctcatgagg tatgagctgt tccgggctaa caaagtcacc agaataaata ttgatttcat
     9601 ctgttacaat acttccaaat ccttctcctg atgtttctaa ccgattatct acaaccacat
     9661 ctggttgatg cttgcgtaca agattaatca aatctgttgc acgccatttc tcgccgaaca
     9721 tttctccgta agaatagtca aaccatagaa tatccagttt gccatacttg gttacgattt
     9781 cttccacttg attgtgtaag aaagtcaagt agttgtcaaa gtcaatcttc tcatctttaa
     9841 aggcttcatt ctcacgcata ggatgaatca tatcgccata tttcggataa tctggatgat
     9901 accagtctat cagactgaag tatagaccta cttttaatcc ttcttctcgt actgattcaa
     9961 caaattcagc tactaagtct ttcctgattt gtgtatttgt agatttgtag tcagtatagg
    10021 ctgagtcaaa caagcaaaat ccatcatggt gcttggcggt caagaccata tatttcatac
    10081 ctgctgcttt tgctgccttc gcccactctc tcggattgta ctttacagga ttaaatgctt
    10141 caaaatatgg ctcatagtca tcaatggata attgttgatg actgcggatc cactcccctt
    10201 ttccagggat tgaatagagc ccccagtgaa tgaacattcc aaagcggtct tttcggaacc
    10261 actctgtacg tttgttaatt tcttgtaaac tattttttgt catcctttta ctgctcctcc
    10321 tccaagggct tcaataaagt atttacttgc aaatgcaaat agtaaaattg gtggtaagat
    10381 aatcacaaca attgctgaaa agagaccatt atagttagta ttaaagctag ttgtgaattg
    10441 accaagcaag gctggaaccg tcagctcatc tttattgatg atcaacattg atgcccaata
    10501 gtattcattc cagttattta taaaagctaa aattgctgct gttaaaatac caggtctagc
    10561 aataggtaac attactttcc aaaatgtctg ggcatagctc gctccatcaa tttcagcagc
    10621 ttcttccaac tccttaggta ttattgcaaa gtaattcttt atgataaaga aactcatggc
    10681 aataccgcta caagagtaga caaaaatcag agctactggc gtattatata tccccaaaac
    10741 atttaccaaa cgatagacag ggaaagtcat agctgttgca gggataaata gagtggagta
    10801 caacattgct gttatcagct ttttcccacg gaaatccatc cgagcaataa cataagaaga
    10861 catggaaatc atgataatac tgataatcac agatatggaa acaactttaa aactgttcca
    10921 aaaataatct aatacatgta attcagtaaa aactttgata taaccatcaa aacttaaatc
    10981 agttggcaaa ctaatgcctg gatttttcat aggatccgct tttaatgagg atagaaatat
    11041 ccataatatt ggaaacactg aaattaaaca agtaatcgcc atatagatgt aaataattaa
    11101 ttttcccgat ttagaaaggc cattcaaacg attgtccata tgctctatct cactttctac
    11161 gtttaccttc tttgaatatc agattgatac acaaaatgat taacattccg cctaaaatct
    11221 gaatcacacc tatagtgtta gctctggcat attgtgtacg agaactagat accgctaact
    11281 cccttatgat aaaactgata ctttttgttc cagctgcacc atttgttagg aagaatactt
    11341 cgttatacaa taggaaaccc gaagttgcgg ccataatcga aacagtcttt aatgtttctt
    11401 ttatcattgg aatggtgata taccattctc ttctccaccc tgtaatgtta tctagtattg
    11461 ctgcttcatg aatctcttgg ggaatggcga aaatttgacc caatatcatt attgtcgatg
    11521 tccctgcaaa gaaaatatat gcacaagtca tcgcaataat attcaaacca ggtgtcaata
    11581 aaatagcatc tgaaaattca ggattaaaaa agcgaataac ttgattaact actccataat
    11641 ttggattgta aatttgtaga aaaatcaaac ccattgcggc actagaaata atactaggta
    11701 tgatataaag gtttcgagat agtttccaac cagccaattt ttttgataag gctatagcaa
    11761 ctgataaagc taatgggact tgaactacta cacctataat tgcccatgta attgaatttt
    11821 tcagtgcttc caaaaagaaa ggatattcac taaaaatgta cttatagttg gcaaaaagat
    11881 tgccaaaacc tagaaattct ggactggtta aattcgtata atcccactta gtaaaggatg
    11941 ttgcaaaaat agttaccacc gaataaaagt agaagagaaa gaaacaaact aatgttggga
    12001 gtaaaaatag aaaaataaat cgttgtttct gtgccttcct attttgtaag gtcatggttt
    12061 tctttgccat aaaatactca ctttctaaaa aagggctaag gaatacatcc ttagccctgt
    12121 tattttagcc gataagggct ttcaagatgt cttgtgtttc ttttactttc tgatcgatat
    12181 tgacaccgtc agcagcactt tcggtcaatg cgttgataat tgcagtacga acgtcaccac
    12241 cccaaacaga tacaacagta ggaacagtta catctgcatt gtttgccatt gatgtcgctt
    12301 cacctaagag ttttacagta gcgtcgtcag aaccgcttgc aatttgagca gtatcaatcg
    12361 cttggctagc tgggttcgct cccacttttt cgaaaattgt agtttgaacc tcgtcactgg
    12421 tcatgtattt tacaaattcc aatgcaagtt tttcttcttc ctcagatagt ttacttgaaa
    12481 ttgtaatacc gccaccagct gaactaatcg caacattacc agcgtacaat cctggtttca
    12541 aagctgcatt atctttcaaa ccacctgcag cccatacacc gttgaagaag actgctgatt
    12601 tattttcagt aaaatcagtt gaataaacgt tggcatcgcc acctgcatta gctgaaccgt
    12661 ttgcttgcac ttctgtcata accaatttaa gtgcttctgc aaattctttt gaatcaattc
    12721 cttcagaagt tagaggacct tctaatagtt tactgccagc ttcagatgag ccaagtacag
    12781 tgttaaagag acgaattgcc ggctctcctg caccaaaggc atatactcct tgtttacgaa
    12841 ccaaggccat agcttcagta aaatcactcc acttggtcca ttggtcagga gttttagccc
    12901 cagcttttga gaaaatatct gcattgtacc aaagacctaa ggttaataat tggtcgtgga
    12961 ctgtatagat ttttccgttc acatcatttt gtgtatagtt tagaccaaca tttttttcca
    13021 atccattatc atcgatatat ggtttcaaat ccagaaccaa actttgttca atagctgcta
    13081 gcgaaacatc gttaccagcc aagtcaatca tatctgggaa ttcaccactt gcaaccttgt
    13141 tgttcatgat gtctgtcaag cttccattca caggagttgg tttgaactca acgtccccag
    13201 ttgcgtgttt tttagcaaat tcatcataaa ggtcacgcat gactttggct gctggccatt
    13261 cttcttcgct atggtgataa ccatgataga attctagaac tgtatcatca ccacctgaag
    13321 ctttttcagt acttgaacta gttcctgacg acgacccaca agcagcaaga atgactgacg
    13381 caaacaaaca caatgcaccg catttcaaca aacttttttt cattttaggt tcctccgtat
    13441 tatttccttt gtccgtaagt tttaaatttt tcagccatca attccatttc ttcatctggg
    13501 aggatgactg gttcacccat gcttttagca acacaataaa ttttagaaca gtattcaacc
    13561 tcctcaatga tattaaaggc atttagtaag tcctgagcac ctgccaagat accgtggttg
    13621 gcaagaaaga ctgcacgtct gtccttcata gcctccgcag cattttcagc caactcctta
    13681 gtcccatatg tggcatattc tgctactcgg acatctttac cagctaccgc aatcatataa
    13741 tggctagctg gtaacggctc tcttattact gccaaaacag ttccataagt tgtgtgggca
    13801 tgaatgactg catcgatatc ttccctttgc tggtattgaa tcagatgcat ataccactca
    13861 cttgaaggaa gtttttcacc ttcaactact cgaccctcca agtccatgat gacgatatct
    13921 tcttccttga tttcaaagaa atcaattcca gatggagtga ttgccattaa acctttttca
    13981 cggttaaata cgctcagatt cccaccagta cctttggtta agccttcagt aactaacttt
    14041 ttgccgtact ttataagttc ctttctttct ttttccatga acataaagtg ttctccttct
    14101 atttactata tagcggtcct aaaacctcac acatcttgaa atctgctgct tccaaatcct
    14161 tagtaccgac accatcaaaa atgcttggac ggaaaattcg ttcccttgga atattgtgga
    14221 gggctacagg aattcgcaac atactagcca gagtgataac ttctgcacca atgtgcccat
    14281 gaacaaaggc tccgtgatta gacccccaat gattcatgac atcatagacg gtttcaaacc
    14341 cagattcacc aagattagga gcaaaccagg ttgttggcca agttttatct gtccgttcat
    14401 ccaagatgcg gtgcacttca tcatccaacg ggcaggtgta gccttctgca atttgtaaac
    14461 ttggaccaac acccttgact agattgacac gaatcaaggt cacaggcaac tcaccttgag
    14521 ttttgaagtg agaagaatag ccacctcctc ggaaatattc gtagttagct cgacaccagt
    14581 ctgtcgcttc cagacaggct tttatatcct cctctgtcat attccagaac tctttcatgg
    14641 ttggctgacc agcttcatct cgtgctgcgg cacttccatc aagggctgaa gcacctgagt
    14701 tgatcaggtg aagaatacca tcttttgcac gacctgttag ctcttgacct gtcacccgtt
    14761 tgaccgcctc tgggctccaa taagtccgaa catcagagaa aattggagcc ttattggtta
    14821 ggagggttcc aaataacatg gcggtcgcat tcaaagtatc attttctgtt gcaaaggcag
    14881 tcacaggacg tggaccattc cagtcaaaag tggaagccag aatcgcttca gcaaaatcac
    14941 cgtttggcaa ccagtctgtc cactgacgtt gaccttggaa accacctgaa attgcatttc
    15001 tgccacgagc ttcctcttcc cagccaatct ctgctaagcg aggatttcca aagagaatat
    15061 ctcggataat caaggtttgc ttggcaataa attcccaatc cttgtcagct ggaatcacct
    15121 tggacttggt aatcacttct gggaattcct ttccagcatt gatgtcaaca ccctctttac
    15181 aatattcctt aatccaagca agagcttttt catattcttc tttatcgtag atttccaact
    15241 ccatgcggcg aagaatttca gtcatgtcca caaattcgac caacattccc agatagtctt
    15301 caaagaagga tgtggtaacc tgagaacccg caattcccat tgaagaagct ccaatgttta
    15361 cataggactt acccttcatc tgaccagcag caatggctcc cttggcaaat agcaagattt
    15421 tttcagctac atcagcagga atgctattgt catctaagtc ctgcacatca tgaccataaa
    15481 tcttgaatgc tgggtaaccc ttttgagcgt agccactcat ggctgcggct agataaactg
    15541 ctccaggtcg ctctgtccca ttaaatcccc aaatggcttt aatcgtatgt ggatccatat
    15601 ccatggtttc tgttccatag caccaacttg gtgtgacaga aagggtagca actacattgt
    15661 cacgagcaaa ctcatcgtag acaacacctg catcgccctg accaccaata gtgcgactgg
    15721 ccagcaaaca ttgaacaggg gttccgtctg cgtaacgcaa attggactca atcaaatcct
    15781 tagcagccag agccatttgc atggtttttt cttctaagga ttcccttaca ccgccctgtc
    15841 gaccatcaat agttggacgg attccaattt taggataaag tgtcattttt ttcctccttc
    15901 tttggataaa aatggttaaa tgttatagac tcttttacaa gtttcttggc ttctttcata
    15961 tcttcaacat agccaagagc cttaaactga acgagggcgt taccgattga ggttgcttca
    16021 tacagaccag taaccaccgt cttacctgta acatctgcta ctaattgtga gaaatattct
    16081 gacttggaac caccgcctat taagtcaatt ctcttataga tgttccctgt tatctcttcc
    16141 aattgtatga tgacttcttt atatttttca gccaaacttt gataaactat cttaaataga
    16201 atcgctgggt ctgttgatac ttttatcccc tcatctgaaa aataacagac aattttttca
    16261 atcatgttac ctggacttgc gaatgtcgaa gcatctgtgt caaatgttgg aacacaactt
    16321 tccacattgt tcaccatctc tgtaatttcg tcgtatgaaa aatcttttcc taattttaag
    16381 aacgattttt ttaattcttc aataatccaa agtccagtac aatttttcaa aaatctagta
    16441 gtcccatcat agccagcttc atttgtgaaa ttatacttca gtgcactatc ggtaagtatt
    16501 ggggctttca gttctgtccc gataagtgac caagttccac aagagacata gagtaagttt
    16561 tcctcttcat gtggaatcgc tgctaccgca cttgctgtat catgctgaca aacattgatt
    16621 actgttattt cattattcaa tatttcgtcc gatatgttac caagtatatt tccttcggat
    16681 actagtttcg gtaaaagtaa ttctgaaatt tcaaatgttt ttaaaatttc atgattccag
    16741 tcttgtgtca atgggttaat catttgcatt gtggaagcaa tgcttctttc aattgcgacc
    16801 tcacctgtca atacaaaatt taagtaatct gaaatcatta acagtttatc agctttgaaa
    16861 tattcttcgg gggtttgaaa tttacaagca atcaattgaa atagtgtgtt aatctccatc
    16921 aactgattac ccgttttaaa atacaaatca tttagagaag aatatcttgc aatctcatct
    16981 aatattgatt cagttcgcct atctcgatag gatactggtt gagcaatcat ttctccattt
    17041 acatccaata atgtaaaatc aacaccccat gtatcaattc caacagaaga taattctgac
    17101 tgttcttgag acattctgat acatttttta acacttttta ccaagctttc tatatcccaa
    17161 cacagtcttc ccttcacttt ttgtattgaa ttgttgaatc gatgaacttc tctcgaaatc
    17221 agttttccat tttcaataga atataggatt cctcttcccg acgtagctcc aaggtcaata
    17281 gccaatacag ttttcatttg aacctccttt ctgttaccgc tttcatgatt ttattttaat
    17341 atatacaaac ttctattaca atacttgaac agtagattga aaattattca aaatattgac
    17401 ataaaatcgc catttttgtt cagaatatgt tattatgtac ttaagaggtg ttagtatgag
    17461 tagagataaa cgattaaaag aaataacaaa tattcttcac agtagaaaga gaatagatgt
    17521 aaaacaactt gaaaaattaa ctttctcaag tacatcaact cttcgtagag atttaatcta
    17581 tcttgaagaa caaggtctca tcaaaagaaa acatggggaa gtggtgctaa acgcatttaa
    17641 taccgtcgaa cttgctcata gtatcagaga gactgaaaat aggtcagaaa agaaaatcat
    17701 tgctgagctt gcaaaagatt ttgttggacc agggatgtgt atgtacttgg attcaagcac
    17761 aactgtttat gaattatgtc cgttcctttc aacaattgac aatctaatta tctttacgaa
    17821 tggacttaat actgctcagt tgctttctga actttctaat ccaacaatga aaatatttgt
    17881 cactggcggt gaggtcaaac accattctgc ctcagtcgta aaccatagta tggaaaatag
    17941 tcttcttgaa cattttagta tagaccttgc tttttgttct gcaagaggaa ttgatgaaga
    18001 atatgtttat gaagcttctt tcagtcaagc cattgcaaaa aaatctatta ttgacaaggc
    18061 taaagagaca atattactga ttgatagttc gaaatttcgg atatccggat ttttcaaaat
    18121 taacaatcta aaacaatata aaaccataat ctcagacaag ctacctgatg aatccttatt
    18181 aacttctgcc gaaaaatatg aagttgaatg gattgccgac taataataca aactatatat
    18241 cagcttaccg ctctacaact ttgaactctt gtagcaagca cagtaagtgg gtaccctctt
    18301 acgataaaat taacgaagca ggcgcctttg gctctgcttt tttcgttaca ttttacttgt
    18361 tagggagaac cctaagaccc cgataggaag gaatagacaa tggaaaaacg tactagacca
    18421 aaccaattaa aaattcgact ctcggataaa gaactctctc aagtgcgaca aaaatatgga
    18481 caatctcggt caaaatcaat gcggcatttc gtcctcaagt gtatccttga aacatcgatt
    18541 tatgaagtcg atatgcaacc atttagagag ttacaacatc tcctttcaaa gacctccact
    18601 aatgtcaacc aaattgccaa gaaggtcaat acttactccc ttgtttataa agaggacatt
    18661 acgacaatcc aaaacgaaat acttttcttt aatgttatag taaaatgtaa caaaaaacag
    18721 tacatttgta atataatgta ctgattttat ttcatttaac tataattcaa ccattgaata
    18781 attgccatgg ggtcctccta aatatgattc attgaaaaaa gccgtaaaaa cggctttaga
    18841 ttgaagaaaa agcccatttt ggaca
//
LOCUS       DASFQS010000040        18718 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.040, whole genome shotgun sequence.
ACCESSION   DASFQS010000040 DASFQS010000000
VERSION     DASFQS010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18718
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.040"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..435
                     /locus_tag="U1041_001145"
     CDS             <1..435
                     /locus_tag="U1041_001145"
                     /inference="COORDINATES: protein motif:HMM:NF020049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEM4768258.1"
                     /translation="GLIIGVSGNTVQTIEQNLVGNLSVGGPAQYSSQQISNLVGWFYP
                     PYSDSTAVVTQASSGNLGKVKDEQGTMTVKVSLLNVRDKPGLDGKVVATYTYGEQFNY
                     DSVYIADGYIWVSYVSRSGVRRYVAAGEESNRRNVVPYGTFK"
     gene            760..1170
                     /locus_tag="U1041_001146"
     CDS             760..1170
                     /locus_tag="U1041_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018379152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM4768259.1"
                     /translation="MEKVCNLVKVILIGRLTAQPELTQTPTGKNLTRVTVAVNRRFKT
                     ENGEREADFLNVIFWGKLAETLVSYGSKGSLISIDGELRTRKYEKDGSNHYVTEILGQ
                     SFQLLESRAQRAMRENNTGDDLADLVLEEEELPF"
     gene            complement(1289..1534)
                     /locus_tag="U1041_001147"
     CDS             complement(1289..1534)
                     /locus_tag="U1041_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768260.1"
                     /translation="MKFFRDLKIDYLESRFSVHESFAEWFLKRKLGFWGKMIFAYLLW
                     LVWLLLFSHPHYIIFFFYGVLLLSLIIMLIEWWKYRK"
     gene            1731..2012
                     /gene="groES"
                     /locus_tag="U1041_001148"
     CDS             1731..2012
                     /gene="groES"
                     /locus_tag="U1041_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEM4768261.1"
                     /translation="MLKPLGDRIVVKIEEKEQTVGGFVLAGASQEKTKEASVLAIGQG
                     IRTLNGDLVAPAVAVGDTVLIDAHAGLEVKDGDQNVHIIREADILAIVE"
     gene            2023..3645
                     /gene="groL"
                     /locus_tag="U1041_001149"
     CDS             2023..3645
                     /gene="groL"
                     /locus_tag="U1041_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940029.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEM4768262.1"
                     /translation="MAKEIKFAADARESMVRGVDILADTVKVTLGPKGRNVVLEKAYG
                     SPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREG
                     LKNVTAGANPIGIRRGIEAAVATAVEALKAQASPVSNKAEIAQVAAVSSRSEKVGEYI
                     SEAMERVGTDGVITIEESRGMETELDVVEGMQFDRGYLSQYMVTDNEKMVAELENPFI
                     LITDKKISHIQDILPLLESILQTNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKA
                     PGFGDRRKAMLEDIAILTGGTVITEDLGLDLKDATIEALGQAVKVVVDKDGTTIVEGA
                     GNPEAIANRVAVIKSQIEGTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKL
                     RIEDALNATRAAVEEGIVAGGGTALVNVIDSVAKLELKGDDETGRNIVLRALEEPVRQ
                     IAYNAGYEGSVIIDKLKNSELGTGFNAATGEWVNMIEAGIIDPVKVTRSALQNAASVA
                     SLILTTEAVVANKPEPVAPAMPQGMDGMGMGY"
     gene            3876..4289
                     /gene="rpsL"
                     /locus_tag="U1041_001150"
     CDS             3876..4289
                     /gene="rpsL"
                     /locus_tag="U1041_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEM4768263.1"
                     /translation="MPTINQLVRKPRKSKVEKPKSPALNVGYNSRKKVQTNVSSPQKR
                     GVATRVGTMTPRKPNSALRKFARVRLSNLIEVTAYIPGIGHNLQEHSVVLLRGGRVKD
                     LPGVRYHIVRGALDTAGVNDRKQGRSKYGTKRPKG"
     gene            4306..4776
                     /gene="rpsG"
                     /locus_tag="U1041_001151"
     CDS             4306..4776
                     /gene="rpsG"
                     /locus_tag="U1041_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011285383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEM4768264.1"
                     /translation="MSRKNQAPKREVLPDPLYNSKLVTRLINRVMLDGKRGTAASIVY
                     GAFDQIKEATGNDALEVFETAMENIMPVLEVRARRVGGSNYQVPVEVRPERRTTLGLR
                     WLVTIARNRGEHTMIDRLAKEIMDAANNTGAAVKKREDTHKMAEANRAFAHFRW"
     gene            5092..7173
                     /gene="fusA"
                     /locus_tag="U1041_001152"
     CDS             5092..7173
                     /gene="fusA"
                     /locus_tag="U1041_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEM4768265.1"
                     /translation="MAREFSLEKTRNIGIMAHVDAGKTTTTERILYYTGKIHKIGETH
                     EGASQMDWMEQEQERGITITSAATTAQWNNHRVNIIDTPGHVDFTIEVQRSLRVLDGA
                     VTVLDSQSGVEPQTETVWRQATEYGVPRIVFANKMDKIGADFLYSVSTLHERLQANAH
                     PIQLPIGSEDEFRGIIDLIKMKAEIYTNDLGTDILEEDIPAEYLEQAQEYREKLVEAV
                     AETDEELMMKYLEGEEITNEELKAAIRKATINVEFFPVLCGSAFKNKGVQLMLDAVID
                     YLPSPVDIPAIKGINPDTDAEEERHASDEEPFAALAFKIMTDPFVGRLTFFRVYSGVL
                     NSGSYVMNTSKGKRERIGRILQMHANSRQEIETVYAGDIAAAVGLKDTTTGDSLTDEK
                     AKVILESIHVPEPVIQLMVEPKSKADQDKMGIALSKLAEEDPTFRVETNVETGETVIS
                     GMGELHLDVLVDRMRREFKVEANVGAPQVSYRETFRASTQARGFFKRQSGGKGQFGDV
                     WIEFTPNEEGKGFEFENAIVGGVVPREFIPAVEKGLVESMANGVLAGYPIVDVKAKLY
                     DGSYHDVDSSETAFKVAASLALKEAAKSAQPTILEPMMLVTITAPEDNLGDVMGHVTA
                     RRGRVDGMEARGNTQIVRAYVPLAEMFGYATVLRSATQGRGTFMMVFDHYEDVPKSVQ
                     DEIIKKNGGNA"
     gene            7380..8390
                     /gene="gap"
                     /locus_tag="U1041_001153"
     CDS             7380..8390
                     /gene="gap"
                     /locus_tag="U1041_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008090210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEM4768266.1"
                     /translation="MVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPVMLAHL
                     LKYDTTQGRFDGTVEVKDGGFEVNGKFVKVSAEREPGNIDWATDGVDIVLEATGFFAS
                     KEKAEQHIHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPM
                     AKALHDAFGVQKGLMTTIHAYTGDQMVLDGPHRGGDLRRARAAAANIVPNSTGAAKAI
                     GLVIPELNGKLDGAAQRVPVPTGSVTELVATLDKKVTAEEVNAAMKAAATESFGYTED
                     QLVSSDIVGISFGSLFDATQTKVIEVDGEQLVKVVSWYDNEMSYTAQLVRTLEYFAKI
                     AK"
     gene            8646..9845
                     /locus_tag="U1041_001154"
     CDS             8646..9845
                     /locus_tag="U1041_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEM4768267.1"
                     /translation="MAKLTVKDVELKGKKVLVRVDFNVPLKDGVITNDNRITAALPTI
                     KYILEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVAFIAGATRGAELE
                     AAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAH
                     ASNVGISANVEKAVAGFLLENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLE
                     KADKVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGKLILPVDSKEANA
                     FAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQA
                     GTIGVMDAIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPG
                     LAALTEK"
     gene            10653..11168
                     /locus_tag="U1041_001155"
     CDS             10653..11168
                     /locus_tag="U1041_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM4768268.1"
                     /translation="MFKKYTFDPKKFRLGMRTFKSGLAVFLVILLFGYMGWEGIQIAA
                     LTAVFSLREDFDQSVHFGASRILGNSIGGFYALLFFILDRLFLDHFWVTAVFVPIFVM
                     LTIMTNVAMNNKAGIIGGVSALLIITLSIPAGDTIQYVFIRVFETFIGVFIAILVNYD
                     VNVIKKRFQDK"
     gene            11244..11615
                     /locus_tag="U1041_001156"
     CDS             11244..11615
                     /locus_tag="U1041_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4768269.1"
                     /translation="MREKEFRRSLAIFPIGSVMKLTDLTARQIRYYEDQGLIKPDRNE
                     GNRRLYSLNDMDLLLEIKDFLDEGLNIAAIKKEYANREAKAKVQKQQKTLTDEDVRRI
                     LHDEFSRQGRFSSPSSIFRSS"
     gene            11644..12990
                     /gene="glnA"
                     /locus_tag="U1041_001157"
     CDS             11644..12990
                     /gene="glnA"
                     /locus_tag="U1041_001157"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009731741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEM4768270.1"
                     /translation="MTFTVADIKRDIKEKNVTFLRLMFTDIMGVMKNVEIPATDEQVE
                     KVLSNKVMFDGSSIEGFVRINESDMYLYPDLDTWTIFPWGDENGRVAGLICDIYTTDA
                     KPFAGDPRGNLKKSLRHMEEAGFSSFNLGPEPEFFLFKMDEQGNPTLEVNDKGGYFDL
                     APTDLADNTRREIVNVLTEMGFEVEASHHEVAVGQHEIDFKYADVLKACDNIQIFKLV
                     VKTIARKHGMYATFMAKPKFGIAGSGMHCNMSLFDKEGNNAFFDPEDPRGMQLSQTAY
                     HFLGGLIKHAYNYTAITNPTVNSYKRLVPGFEAPVYIAWAGKNRSPLVRVPASRGMGT
                     RLELRSVDPTANPYLAMAVLLEVGLEGIQNKIEAPAPVESNIYAMSDEERREAGITDL
                     PSTLHNALKALREDEVVRAALGDHIYTNFLEAKKIEWASYATYVSQWEIDNYLDMY"
     gene            complement(13354..15033)
                     /locus_tag="U1041_001158"
     CDS             complement(13354..15033)
                     /locus_tag="U1041_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM4768271.1"
                     /translation="MSSVNLKPHEVGVFAIGGLGEIGKNTYGIEYKDEILIVDAGIKF
                     PEDDLLGIDYVIPDYSYIVENLDRVKGLVITHGHEDHIGGIPFLLKQANVPIYAGPLA
                     LALIRGKLEEHGLLRDATLHEINHNTELTFKHLKVSFFRTTHSIPEPLGIVVDTPQGK
                     IVCTGDFKFDFTPVGEPADLHRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIM
                     KLIEGIHGRIIFASFASNIFRLQQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKV
                     PKDTFIEPNEIKEYPASEIMILCTGSQGEPMAALSRIAHGTHRQVQLQPGDTVIFSSS
                     PIPGNTTGVNKLINILIEAGVDVIHGKINNIHTSGHGGQQEQKLMLRLIKPKYFMPVH
                     GEYRMQKIHASLAVDTGVPKDNIFIMENGDVLALTKDSARLAGKFNAQDIYVDGNRIG
                     EIGAAVLKDRRDLSEDGVVLAVATVDFNSKMILAGPDILSRGFIYMRESGELIRESQR
                     VLFNAIRIAMRNKDANIQTVNGAIVNALRPFLYEKTEREPIIIPMILTPDR"
     gene            complement(15037..15267)
                     /locus_tag="U1041_001159"
     CDS             complement(15037..15267)
                     /locus_tag="U1041_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000639444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HEM4768272.1"
                     /translation="MIYKVFYQESKISPRREQTCALYLDIDAASELEGRIIARELVET
                     NRPEYNIEFIDLLSDNHLEYEKEHADFKITEF"
     gene            15571..16437
                     /locus_tag="U1041_001160"
     CDS             15571..16437
                     /locus_tag="U1041_001160"
                     /inference="COORDINATES: protein motif:HMM:TIGR01716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg/GadR/MutR family transcriptional regulator"
                     /protein_id="HEM4768273.1"
                     /translation="MGTVPQMSLGEFYRELRNSRLVKQKDVVRGDFTAAQLSRFESGK
                     SMLAADKLILAVEGINMTMEEFTYKYHGYKEAPHIELANLISDLYYQQDKEALKALLT
                     SDLLADEGELYSRLNAIVIKVALVALEGIDNVEEEDRQYLADYLFAIEEWTSFELYLF
                     MNAQMLLNNRMLLYFAHDLCKEEKSFNKLRKHQELIKSTLLNTISELFDRGIYSQVSY
                     YLDKMESMISFKDTFVKIMARYYRLLLDYIENGRSDKEKEIIETYIQSIQELIDDQTA
                     SIIRVHFLRFES"
     gene            16708..17289
                     /locus_tag="U1041_001161"
     CDS             16708..17289
                     /locus_tag="U1041_001161"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768274.1"
                     /translation="MKKKFLAVTMLFSLVFPASLVFAESHGDHSSHGDHSEAVVISEM
                     AEGQLIVEQQIEVAAQTEPLYSFEEILDLPNEAFPNATPDEVESIKGMIEATMDYNHS
                     DMKVPLSMVYIDKTAENSDAILSGGGLPYCLDDNGWGYQNFITSDCNIAMAVVSQCVY
                     ESIIKNPNLRYCRADLYRNCSPRIGHSPYWHRH"
     gene            17326..18429
                     /locus_tag="U1041_001162"
     CDS             17326..18429
                     /locus_tag="U1041_001162"
                     /inference="COORDINATES: protein motif:HMM:NF012311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8/S53 family peptidase"
                     /protein_id="HEM4768275.1"
                     /translation="MIQKILRLFGLVSCLLALVCAVVFREGLVSNPLGQFSGFPLNHQ
                     HTGWGTSRYYPNIDPTAKPTQEVRVAIIDSGIREEAVDEFYVEDMQVFSTSTSVFDTI
                     GHGTKIASIIGAKNNHVLTLGLSPEARLFSYKVTDDDGTIKNDYLVKAVQQAIEDHVD
                     VVNLSMVVTNPSKELEDVVEAYLQQGGYMVVPAYDLKKVEALNPLLTIEGVVSVGTYN
                     EFFTLLNPQEEIAYYAPYSQETLSMENRIVRSEGSSFSTAFVSGTIAHLLSVGQTDAE
                     ITKQLDDFFSARSVKSKQSPLLAGYETHQALVNNSYTVLSLSLIGLLVFQTILGILTA
                     RKESEVRGAYMRYIVVTDVLLVILALLILPTQM"
BASE COUNT         5503 a         3455 c         4365 g         5395 t
ORIGIN      
        1 ggtctaatta tcggtgttag tggcaatacc gtccaaacaa tcgagcaaaa cttggtaggt
       61 aatctgtctg tcggtggtcc tgctcagtat tctagtcagc aaatcagcaa tcttgttggc
      121 tggttttatc caccttacag cgactctact gcagtggtaa cacaggcaag cagtggcaat
      181 ctcggtaagg tcaaagacga gcaagggaca atgaccgtta aagtatctct gctcaatgtc
      241 cgagacaagc ctggtctaga cgggaaggtt gttgcaacat atacctatgg cgagcagttt
      301 aattatgatt cggtctatat tgccgatgga tacatttggg tatcgtatgt tagccgtagc
      361 ggtgtacgtc gctatgtagc agcaggcgag gagtcaaatc gacgcaatgt cgtgccttac
      421 ggtacgttta aatagtattt tcagcccagc gtttgctggg ctttttttcg tgctcaagat
      481 acagtaggaa acagtagaat acagtaaaaa tacagatttt tagatattat ttccaatatt
      541 aattcaaaaa aacagacttt tttcgaataa ataagtagga ggatataaaa tgttagaatt
      601 tagcgaatta aaacaagcag tagatgacgg atatattaaa agcgacacgg tcatgattgt
      661 ccgcagggat ggtagagtat ttgactacgt cttaccaggc gagccggtcc gaccgtggga
      721 agtggtctgc gaggagaagc tgggggatgt gatgagggaa ttgaaaaagt atgtaattta
      781 gtcaaagtta ttttaatcgg tcgcttgacg gcccaacctg aactcactca aacaccaact
      841 ggcaaaaatt tgactcgtgt aacagtcgca gtcaatcgac gatttaagac agaaaacggt
      901 gagcgtgaag cagattttct taatgttatt ttctggggca aactggcgga aacacttgtc
      961 tcctatggta gcaagggtag tctgatttct attgacggtg agttgcgaac gcgaaaatac
     1021 gaaaaagacg gcagcaacca ctatgtgact gaaatcttag gacaatcctt ccagttgctc
     1081 gaaagccgtg cccaacgtgc catgcgtgaa aacaatactg gtgatgacct agctgacttg
     1141 gttctggaag aggaggaatt accgttttaa gatgaaatca gtcccaagac cgatggagaa
     1201 tgttgaaaag taggctatac tatagtcaat cctaaatatt tttcatatct ccttaaaaac
     1261 accgacgaaa gttggtgttt tttgctactt attttctata tttccaccat tctatcagca
     1321 tgataattag agaaagtagg agaactccgt agaagaaaaa gatgatgtaa tgagggtggg
     1381 aaaagagaag caaccagact agccagagta gataggcgaa tatcattttc ccccaaaaac
     1441 ctaatttacg ttttaaaaac cattcggcaa aactttcgtg aacggaaaat cgactttcaa
     1501 ggtaatcaat ttttaaatct ctaaaaaatt tcatgaatac cccttaactt tttaataata
     1561 gtatagcata gttttgctat aattaacagg ttgtgtttcc tcagtcctgg gacggatttt
     1621 aggtaaatta aaaaagaatt ttcttgacta tttttgacca agtgatacaa taggaaatgt
     1681 gaattagcac tcggaggtaa agagtgctaa aaagaccagg aggtaatacc atgttgaaac
     1741 cattgggcga tcgtatcgtc gtaaaaattg aagaaaaaga acaaacagtt ggtggctttg
     1801 tccttgcagg tgcaagtcaa gaaaagacaa aagaagcaag tgtcctagcg attggtcaag
     1861 gaattcgtac cttgaacgga gacttggttg ccccagcggt ggcagttgga gatactgtac
     1921 tgattgatgc tcacgcagga ttggaagtca aagacggtga tcagaacgtt cacatcatcc
     1981 gtgaagcaga cattttggca atcgtagaat agaggtagga aaatggcaaa agaaattaaa
     2041 tttgcagcag atgcacgtga aagcatggtc cgtggtgtcg atattttggc tgatacagtc
     2101 aaagtaacct tgggtcccaa aggtcgcaat gttgttttgg aaaaggctta tggctcacca
     2161 cttattacta atgatggtgt aaccattgct aaagaaatcg agttggaaga tcattttgaa
     2221 aatatgggtg ctaagttggt atccgaagtg gcgtcaaaaa ccaatgacat cgctggtgac
     2281 ggtacaacaa ctgctactgt cttgacccaa gctatcgtac gtgaaggctt gaaaaacgta
     2341 actgcaggtg ccaacccaat tggtatccgt cgtgggattg aagctgcagt tgcgacagcg
     2401 gttgaagcct tgaaagctca ggcaagccca gtatccaata aagctgaaat tgctcaggta
     2461 gcagcggtat cttcccgttc tgaaaaagtt ggtgagtaca tttcagaagc aatggagcgc
     2521 gtgggaacag acggcgttat tactatcgaa gaatctcgcg gtatggaaac tgagctggat
     2581 gtggttgaag gtatgcaatt cgaccgtggt tatctgtcac aatacatggt aacagataat
     2641 gaaaagatgg tggcagaact tgaaaatcca tttatcttga ttacagataa gaagatttct
     2701 catatccaag acattttgcc actcttggaa agcattcttc agaccaaccg tccgcttttg
     2761 attattgctg acgatgtgga tggtgaagca cttcctaccc ttgttcttaa caagattcgt
     2821 ggtacattca acgttgttgc tgttaaggcg ccaggatttg gtgaccgtcg taaagctatg
     2881 ttggaagaca tcgctatctt gactggtggt acagtgatta cagaagacct tggtttggac
     2941 ttgaaagatg cgaccattga agcccttggt caagctgtca aggttgtggt cgacaaggat
     3001 ggtacaacta ttgttgaagg tgctggcaat cctgaagcca ttgccaaccg tgtggctgtt
     3061 atcaagtcac aaattgaggg aacaacttca gaatttgacc gtgaaaaatt gcaagagcgt
     3121 ttggctaaat tgtcaggcgg tgttgcagtc atcaaagttg gtgccgctac tgagactgag
     3181 ttgaaagaaa tgaaactccg tatcgaagat gccctcaacg caacacgtgc cgcagttgaa
     3241 gaaggaatcg ttgctggtgg tggtacagcc cttgtcaatg ttatcgatag cgtagcgaaa
     3301 ttggagttga aaggcgacga tgagacagga cgcaatattg tccttcgtgc cttggaagaa
     3361 ccagttcgtc agattgccta taacgcaggc tatgaaggtt cagttatcat tgataaattg
     3421 aagaattcgg aacttggaac aggctttaat gctgcgacag gtgaatgggt gaatatgatt
     3481 gaggcaggaa ttattgaccc tgttaaggtg actcgttcgg cccttcaaaa cgcagcatca
     3541 gtagccagct tgattttgac aacggaagca gttgttgcca ataaaccaga accagtcgct
     3601 ccagctatgc cacaaggtat ggacggaatg ggtatgggct actaagaaat agcaaaatga
     3661 cacagctgat tggctgtgtt ttttcttgaa aatttcaaac atatctattt gacaatgtct
     3721 tctagctgtg gtattatatt agacggtact ttttactttt ggtctctcaa gagtgtacag
     3781 ggacgtgctg acaaatgttg caaaagtaca cacagatagg ggttgtcacc aatgccttat
     3841 caccaaaaat aaaaaatata tacaggagaa tgtagatgcc tacaattaac cagttggtac
     3901 gtaaaccacg taagtctaaa gtagaaaaac ctaaatcacc agctttgaac gttggttaca
     3961 acagccgtaa aaaagttcaa acaaacgttt catcaccaca aaaacgcggt gttgcaactc
     4021 gtgtcggaac aatgacacct agaaaaccta actcagccct tcgtaaattt gctcgtgtac
     4081 gtttgagcaa ccttatcgaa gttactgctt acatcccagg tatcggtcac aacttgcaag
     4141 agcacagcgt tgttcttctt cgtggtggac gtgtaaaaga ccttccaggg gtacgttacc
     4201 atatcgttcg tggtgcgctt gatactgcag gtgtaaacga tcgtaagcaa ggccgttcta
     4261 aatacggtac taaacgtcca aaaggctaag aaaggggaaa tataaatgag tcgtaaaaat
     4321 caagcgccta agcgcgaagt attgccagat ccattgtata actcaaaatt ggtaactcgt
     4381 ttgattaacc gtgttatgtt ggacggtaaa cgtggtactg ctgcatcaat cgtttacggt
     4441 gcttttgatc aaatcaaaga agcaactggt aacgatgcac ttgaagtatt tgaaacagca
     4501 atggaaaaca tcatgcctgt acttgaagta cgtgcacgtc gtgtcggtgg ttctaactac
     4561 caagtcccag ttgaagttcg tccagagcgt cgtacaacac ttggtcttcg ttggttggta
     4621 acaatcgctc gtaaccgtgg tgagcacact atgattgatc gccttgcgaa agaaatcatg
     4681 gatgcagcaa acaacacagg tgcagctgtt aagaaacgtg aagatactca caaaatggca
     4741 gaagcaaacc gcgcattcgc acacttccgc tggtaagata ggatgtgagg acgttaagaa
     4801 aattcaagga aaaataggaa atcgaagcag aatgcttttg cattcaatga gatttatctt
     4861 ttttcgttga cagcaggccg ttcgagttca gtttctacat tggacatatg gaagtgaact
     4921 gaacttaatt agatgaagga acttcattca atcatcacaa accggattga ggatgacctc
     4981 gtccacttca caccattagt aagaaatcaa gcgggtggga cttgcccact cgcttttctt
     5041 aaaatatggt ataataaagt ataaaactaa aattatagga gaacaaacct catggcacgc
     5101 gaattttcat tagaaaaaac tcgtaatatc ggtatcatgg cgcacgttga cgcgggtaaa
     5161 acaacgacaa ctgagcgtat tctttactac actggtaaaa tccacaaaat cggtgaaacg
     5221 cacgaaggtg catcacaaat ggactggatg gagcaagagc aagagcgtgg tatcacaatc
     5281 acatctgctg caacaacagc tcaatggaac aaccaccgtg taaacatcat cgacacacca
     5341 ggacacgtgg acttcacaat cgaagtacaa cgttcacttc gcgttcttga tggtgcggtt
     5401 accgttcttg actcacaatc aggtgttgag ccacaaactg aaacagtatg gcgtcaagca
     5461 actgaatacg gtgttccacg tatcgtattt gccaacaaaa tggataaaat tggtgctgac
     5521 ttcctttact cagtaagcac acttcatgag cgtcttcaag caaatgctca tccaatccaa
     5581 ttgccaatcg gttctgaaga tgagttccgt ggtatcatcg acttgatcaa gatgaaagct
     5641 gaaatctata ctaacgacct tggtacagat attcttgaag aagatattcc agctgaatac
     5701 cttgagcaag ctcaagaata ccgtgaaaaa ttggttgaag cagttgctga aactgatgaa
     5761 gaattgatga tgaaatacct tgaaggtgaa gaaatcacaa acgaagaatt gaaagctgct
     5821 atccgtaaag cgactatcaa tgttgaattc ttcccagtat tgtgtggttc agccttcaaa
     5881 aacaaaggtg ttcaattgat gcttgatgcg gttattgact accttccaag cccagttgat
     5941 atccctgcta tcaaaggtat caacccagat acagatgctg aagaagagcg tcatgcatca
     6001 gatgaagagc catttgcagc tcttgccttc aagatcatga ctgacccatt cgtaggtcgt
     6061 ttgacattct tccgtgtcta ctcaggtgtt cttaacagtg gttcatacgt aatgaacact
     6121 tctaaaggta aacgtgagcg tatcggacgt atccttcaaa tgcacgcaaa cagccgtcaa
     6181 gaaattgaaa ctgtatatgc tggtgatatc gcagctgcgg ttggtttgaa agatactaca
     6241 actggtgact cattgacaga tgagaaagca aaagtaatcc ttgagtcaat ccatgttcca
     6301 gaaccagtta tccaattgat ggttgagcct aagtctaaag ctgaccaaga caagatgggt
     6361 attgcccttt ctaaattggc tgaagaagat ccaacattcc gcgttgaaac aaacgttgaa
     6421 actggtgaaa cagttatctc tggtatgggt gagttgcact tggatgtcct tgttgaccgt
     6481 atgcgtcgtg aattcaaggt tgaagcaaac gtaggtgctc ctcaagtatc ataccgtgaa
     6541 acattccgtg cttctactca agctcgtggt ttcttcaaac gccagtctgg tggtaaaggt
     6601 caattcggtg acgtttggat cgaattcaca ccaaacgaag aaggtaaagg tttcgagttc
     6661 gagaacgcta tcgtcggtgg tgtggttcca cgtgaattca tcccagcggt tgaaaaaggt
     6721 ctcgtagaat ctatggctaa cggtgttctt gctggttacc caatcgttga cgttaaggcg
     6781 aagctttacg atggttcata ccatgatgtc gactcatctg aaacagcctt caaagtggca
     6841 gcatctcttg cccttaaaga agctgctaaa tcagctcaac caactatcct tgagccaatg
     6901 atgcttgtaa ccatcactgc accagaagac aaccttggag acgttatggg tcacgttact
     6961 gcacgtcgtg gtcgcgttga cggtatggaa gctcgtggta acacacaaat cgttcgtgct
     7021 tatgtgccac ttgctgaaat gttcggttac gcaactgttc ttcgttcagc aacacaaggt
     7081 cgcggtactt tcatgatggt atttgaccac tacgaagatg taccaaaatc tgtacaagat
     7141 gaaatcatta agaaaaatgg tggcaatgct taattgctaa cccaggcagc ttcggctgcc
     7201 tttttctatg taagttcctg cattaaagta tgcaaactct tgcaattttc ggtaaatagt
     7261 tatataataa aaacgttgaa aagatgcttg taggcttaca agttaatatt ttcacaaaag
     7321 aattaaaagg cttgcctttt aaaataaaga actcgatttt cataaggagg aaatcattca
     7381 tggtagttaa agttggtatt aacggtttcg gacgtatcgg tcgtcttgct ttccgtcgta
     7441 tccaaaacgt agaaggtgtt gaagttactc gtatcaacga ccttacagat ccagtaatgc
     7501 ttgcacactt gttgaaatat gacacaactc aaggtcgttt cgacggtact gttgaagtta
     7561 aagacggtgg tttcgaagtt aacggtaaat tcgttaaagt ttctgctgag cgcgagccag
     7621 gaaacatcga ctgggctact gatggcgtag atatcgtttt ggaagctaca ggtttctttg
     7681 cttctaaaga aaaagctgag caacacatcc acgctaacgg tgctaaaaaa gttgttatca
     7741 ctgctcctgg tggtaacgat gttaagactg ttgttttcaa cactaaccac gacatccttg
     7801 atggtactga aacagttatc tcaggtgctt catgtactac aaactgtttg gcaccaatgg
     7861 ctaaagctct tcacgatgca tttggcgttc aaaaaggttt gatgactaca atccacgctt
     7921 acactggtga ccaaatggtt cttgacggac cacaccgtgg tggtgacctt cgtcgtgcac
     7981 gtgctgctgc tgcaaacatc gttcctaact caactggtgc tgctaaagct atcggcttgg
     8041 taatcccaga attgaacggt aaacttgacg gtgctgcaca acgtgttcca gttccaacag
     8101 gttctgtaac tgaattggtt gcaactcttg acaagaaagt aactgctgaa gaagtaaacg
     8161 ctgctatgaa agctgctgct actgaatcat ttggttacac tgaagaccaa ctcgtatctt
     8221 cagatatcgt aggtatctca ttcggttcat tgtttgatgc aactcaaact aaagttatcg
     8281 aagttgatgg cgagcaattg gtaaaagttg tttcatggta cgacaacgaa atgtcttaca
     8341 ctgcacaact tgttcgtact cttgagtact tcgcaaaaat cgctaaataa tccttagtga
     8401 aaattgaaga ggcttcggcc tcttttttgt tttgattgct gaaatatagc tgtttcctta
     8461 tgctaagaaa caaggatggt ataagttgtt tctgatttgg caactttaga atttgaaaaa
     8521 tctgattacg aggcgatagt ttttagattt cataacattt gtgaaaaaaa tatctttatg
     8581 caagaaaaaa aacagaaaat atgatacaat ggtaaagtaa atataattta aggagttctt
     8641 atctaatggc aaaattgact gttaaagatg tagaattgaa aggcaaaaaa gttcttgttc
     8701 gtgtggactt caacgtgcct ttgaaagatg gcgttatcac taacgataac cgtattacag
     8761 cagctcttcc aactatcaag tatattcttg agcaaggtgg acgtgcaatt cttttctctc
     8821 accttggtcg tgtgaaagaa gaagctgaca aagaaggtaa atcattggct cctgtggcag
     8881 ctgacttggc agctaaattg ggtcaagacg ttgctttcat cgcaggtgct actcgtggtg
     8941 ctgaattgga agcagctatc aatgctttgg aagatggaca agttctcctt gttgaaaaca
     9001 ctcgtttcga agatgttgat ggtaagaaag aatctaaaaa cgacgaagaa cttggtaaat
     9061 actgggcttc acttggtgat ggtatcttcg ttaacgatgc atttggtact gcacaccgtg
     9121 cgcacgcatc aaacgttggt atctcagcaa atgtagaaaa agcagtagct ggtttccttt
     9181 tggaaaacga aattgcttac atccaagaag ctgttgaaac tccagagcgc ccattcgtgg
     9241 caatccttgg tggttcaaaa gtatctgata agatcggtgt tatcgagaac cttcttgaaa
     9301 aagctgacaa agttcttatc ggtggtggga tgacttacac attctacaaa gctcaaggta
     9361 tcgaaatcgg taactcactt gtagaagaag acaagcttga tgtggcaaaa gcacttcttg
     9421 aaaaagcaaa cggtaaattg atcttgccag ttgactcaaa agaagctaac gcatttgctg
     9481 gatatactga agttcgcgat acagaaggcg aagcagtttc agaaggcttc cttggtcttg
     9541 acatcggtcc taaatcaatc gctaagtttg acgaagcttt gactggtgcg aaaacagttg
     9601 tttggaatgg tcctatgggt gtgtttgaaa acccagactt ccaagcaggt acaatcggtg
     9661 taatggatgc tatcgtgaaa caaccaggcg tgaaatcaat catcggtggt ggtgactcag
     9721 cagcagcagc tatcaacctt ggccgtgcag acaagttctc atggatctca actggtggtg
     9781 gtgcatcaat ggaactcctc gaaggtaaag tgcttccagg acttgcagct ttgactgaaa
     9841 aataggcggt aagtcaggaa tctatgattc cgtagacgca cccccgcaag gctgaatagg
     9901 ttggtcacaa gcgtagcaaa gtgaactgcc attcagctac tgcgtatgaa agatgaacga
     9961 tgaaaagagt tgggagacca actcttttct agtacaaagg ctagattttc tgtgaacgta
    10021 gtgagtttag aaaatcagcc taggtaaagg ctaaaatgca acggatttcc gttgcatttt
    10081 gtacaccacg tagcgtttct acgaagctaa gcgagttaga aagtctagca aggtgtaaag
    10141 tgcttccagg tcttgcgacg gcacggagtg cctagtgcca tgcctagtct ttctgggaag
    10201 tatgaccttg aaagactggc taggtgcagc tcttactgaa aaataggcgg tgagtcagtt
    10261 caaaatatct gggagatatg ttgaggttag aaatagaaga agcgaagctt ctgtcaaaaa
    10321 tgattccgta gattgttact ttgatttttc ttggtgacaa cttcaaatag tccactgggc
    10381 tatttgaacc ccttaagact gaatcttggt cacaactccc attcagctac tgcgcaaaaa
    10441 atataaatgt aaaaaaagac gttgtttttt tgcagcgtct atttgtttgt cttacttctg
    10501 ggttccttct tgcagctgat ttaaagtggc agattattgg tttttcgaaa agctggcgtg
    10561 aacaggaggc ttttccagtc gagcttagga gaaaagaaaa gctgggcagg tatttgctat
    10621 tctattttcc gaaatcatgt tagaatagag gtatgtttaa aaaatataca tttgatccaa
    10681 agaaatttcg gttggggatg cggacgttca aatcgggttt agcagtcttt ctagttattc
    10741 tactctttgg ctatatgggc tgggaaggga ttcagattgc ggctttgacg gctgtgttta
    10801 gtttacgaga agacttcgat cagagtgtcc attttggagc ttctcgtatt ctgggtaatt
    10861 ctattggcgg tttttatgcg ctacttttct ttattttgga taggttattc ttagatcatt
    10921 tttgggtaac tgcggttttt gttccgatat ttgtcatgtt aacgattatg acaaatgtgg
    10981 cgatgaataa taaagcggga attattggtg gtgtatcagc tttattaatt attacattgt
    11041 cgattcctgc tggtgatacg attcaatatg tgtttattcg tgtatttgaa acctttatcg
    11101 gagttttcat tgcgattcta gttaattatg atgtgaatgt tataaaaaaa cgttttcagg
    11161 ataaataatg ttataaaata taacatcacc tattgacctc aaaaaaaaat tctcctataa
    11221 tggtaggcag aaaggagttc gttatgagag aaaaagagtt tcgtcgttcc ttagccatct
    11281 ttccgatcgg tagtgtgatg aagttgacag atttaactgc tcgtcaaatt cgttactatg
    11341 aagatcaagg cttgattaag cctgatcgca atgaagggaa tcgtcgcttg tattctctaa
    11401 acgatatgga cttactttta gaaatcaagg attttttgga tgaaggtttg aatattgctg
    11461 cgattaagaa ggaatatgca aatcgggaag cgaaagctaa ggtccaaaaa cagcagaaaa
    11521 ccttgactga tgaagatgtc cgtcgtatct tacatgatga attcagtcgt cagggacgat
    11581 tttcaagtcc tagttccatt ttccgttcgt cgtaattagc ttttaaaata gaggagaaaa
    11641 ataatgacat tcacagtggc agatatcaag cgcgatatca aagagaaaaa cgttaccttc
    11701 ctacgtctta tgtttacaga catcatggga gtgatgaaaa acgtagaaat tccagcaact
    11761 gatgagcagg tcgaaaaggt tttgtcgaat aaggtcatgt ttgatggttc atctattgag
    11821 ggatttgttc gtatcaatga atcagatatg tatctttacc cagacttgga tacatggact
    11881 atcttccctt ggggtgatga aaatggccgt gtagctggct tgatttgtga tatctataca
    11941 acagatgcta agccttttgc tggtgaccca cgtggaaatt tgaagaaatc gcttcgtcac
    12001 atggaagagg caggtttctc ttcatttaac cttggtccag aaccagaatt cttcctcttt
    12061 aagatggacg aacaaggaaa tccaacgctt gaagtaaatg ataaaggtgg ttactttgac
    12121 ctcgcaccaa cggatttggc tgataataca cgtcgcgaaa tcgtcaatgt cttgacagag
    12181 atgggctttg aagttgaagc gagccatcac gaagtggcag taggtcagca tgaaattgac
    12241 ttcaaatatg cggacgtctt aaaagcttgc gacaatattc aaatcttcaa gttagttgtt
    12301 aaaacaattg ctcgtaagca tggtatgtat gcgacattta tggccaagcc taagtttggt
    12361 attgctggct caggtatgca ctgtaacatg tcactctttg acaaggaggg aaacaatgcc
    12421 ttctttgatc cagaggatcc tcgcggtatg cagctgtctc aaactgctta ccatttcctt
    12481 ggtggtttga ttaagcatgc ttataactat actgctatta caaacccgac agtgaactct
    12541 tacaagcgtt tggttccagg ctttgaagct cctgtgtata ttgcttgggc tggtaaaaac
    12601 cgctcaccat tggttcgcgt acctgcatca cgtggaatgg gaactcgttt ggaattgcgc
    12661 tcggttgatc caactgccaa cccatactta gctatggcag ttctattgga agttggcttg
    12721 gaaggtattc aaaataaaat tgaagcacca gcaccagtag aatctaatat ctatgcaatg
    12781 tctgatgagg agcgtcgtga agcaggtatc actgatcttc cttcaactct tcacaatgca
    12841 ttgaaagctc ttcgtgaaga cgaggtagtt cgtgcagctc taggtgatca tatctatacg
    12901 aatttcttgg aagctaagaa aatcgaatgg gcaagctacg caacctacgt ttctcaatgg
    12961 gaaattgata actatttgga tatgtattaa acaaaggacc ccgacgggtc ctttgttcat
    13021 gagcttgaaa accagatagc gaattaggac cccgatgggt cctttgttca tgagcttgaa
    13081 aatcagagag cgagtaatga cgcttggacc attttttcat gagcttgaaa accagatagc
    13141 gaattgggtc ctttgttcac gagccgagaa attggaaagc gtgtaatggt ccagtggagt
    13201 gaaatagtct gggaagagac tgtttcagtc tgagctaata aatagcaggg cgaggggata
    13261 ggcatgagct tggaaacggt ctttttttca agctgggtta tcttgttaat ataaaataaa
    13321 tcccagaggt ttcacctctg ggattttagt gtgttatcgg tcaggcgtca gaatcattgg
    13381 gataatgatt ggttcacgct ctgttttttc gtataggaat ggtcgtaagg cgttaacaat
    13441 ggcgccgttg actgtttgga tatttgcgtc tttattacgc atagcgatgc ggatagcgtt
    13501 gaaaaggacg cgttggcttt cgcggatgag ctcgccagat tctctcatat agataaaacc
    13561 gcgactgagg atgtctggtc ctgctaatat catcttagaa ttaaaatcga cagtggctac
    13621 tgcaaggaca acaccatctt ctgaaagatc gcggcggtct tttagaacag ctgcaccgat
    13681 ttcaccgata cggtttccgt ctacatagat gtcttgggcg ttgaacttgc cggccaatcg
    13741 tgcagaatcc ttggtcagtg ctaggacatc gccgttttcc atgatgaaga tattatcttt
    13801 gggaacgcct gtatccactg ctagactggc atggattttt tgcatgcggt attcgccatg
    13861 gacaggcatg aagtattttg gtttgatcaa gcgaagcatg agtttttgct cttgttgacc
    13921 accgtgccca gaggtatgga tgttattgat cttgccgtga atcacatcga caccggcttc
    13981 aatcaagata ttgatgagct tgttgacacc tgtggtattt cccggaatag gactggacga
    14041 gaaaataacc gtgtcacccg gctggagttg cacctgacgg tgagtaccgt gggcaatgcg
    14101 ggagagggca gccataggct ccccttggct acctgtacag agaatcataa tctcgctggc
    14161 aggatattct ttgatttcgt ttggttcgat aaaggtatct ttcggaacct tgatgtagcc
    14221 gagctcgata ccattgacga tggctttctc catagaacgt ccaaagacag cgatcttgcg
    14281 tccggtctta accgctgcat ccgcagcttg ttggagacgg aagatgttgg aggcgaagga
    14341 ggcaaagatg atgcgtccgt gaatgccttc aatcagtttc atgatggact gaccgaccac
    14401 tttttccgag ttggtgaagg ttgggacttc agcatttgtc gagtcggaga ggaggcagag
    14461 aacgccttct tcaccgagtg cagccatgcg atgcaggtct gctggctcgc caactggagt
    14521 gaagtcgaac ttgaagtcac cggtacagac aatttttcct tgcggggtgt caacgacaat
    14581 accaagtggt tctgggatag agtgggtggt gcggaagaag ctgaccttga ggtgcttgaa
    14641 ggtcaactct gtattatgat tgatttcatg caaggtcgca tcacggagca gtccgtgttc
    14701 ttccaatttg ccacggataa gggcgagggc taaaggtcca gcatagattg ggacattggc
    14761 ctgcttgagt aagaagggaa tgcctccgat gtggtcttcg tgcccgtggg taataaccag
    14821 acctttaacg cggtctaggt tttcaacgat gtaggagtag tctgggataa cgtagtcgat
    14881 acccaatagg tcatcttcag ggaacttgat accggcatcg acgatgagaa tttcatcctt
    14941 atactcgata ccataggtat ttttcccgat ttctcccaaa ccaccgatgg cgaaaacgcc
    15001 aacttcatga ggttttagat tgactgatga catggattaa aactccgtaa ttttgaaatc
    15061 tgcgtgctct ttctcgtatt caagatgatt gtctgataag aggtcgataa attcgatgtt
    15121 gtattcaggg cggttggttt ccaccaattc acgcgcgata atacgacctt ccaattctga
    15181 tgcagcatcg atgtctagat aaagagcaca tgtttgctcg cgacgtgggc taatttttga
    15241 ttcttgatag aatactttat aaatcatgtg tagtatagtt cctttctttt tgactggcaa
    15301 ctatgaaaaa agccccaaac agttggggct gtctggtaat gcttattcaa ttttctcgag
    15361 ttgtcaattt attcagtcta aatattactc ttcattatac cataaaatag gctgatggta
    15421 aaagggtttg gtaggaaaat ggaaaagtgt catgattttc agaaacatgc agagaataaa
    15481 tggataaatg agtgaaattg acaaatatat atttggatat tataataaat ggaagtggaa
    15541 ttttaatgca tcaagaaagg gggatgagtc atgggtacag taccacaaat gagtttaggc
    15601 gaattttaca gggaactccg aaattctcgc ttggttaagc aaaaggatgt tgtcagagga
    15661 gactttacag cagcccagct atcacgcttt gaatcgggca agtccatgtt ggcggcagat
    15721 aagttgatac tggcagttga agggattaac atgaccatgg aggagtttac ctataaatac
    15781 catggttaca aggaagcacc tcatatcgag ctggccaatc tcatctcaga tttgtattac
    15841 cagcaggaca aagaagcttt gaaagcttta ttaacatcag atttgttagc agatgaagga
    15901 gaactttact ctcggcttaa tgctattgtt atcaaggtag ctttagtcgc tttagaaggg
    15961 atagataatg ttgaagaaga agataggcaa tatttggcag actatctctt cgctattgag
    16021 gagtggacaa gttttgagct ttatctattt atgaatgcac agatgttgtt gaataatcgg
    16081 atgttattgt attttgctca tgacttatgt aaggaagaaa aatcttttaa taaacttagg
    16141 aaacatcagg aacttataaa atctacgtta ctcaatacga tttcggaatt atttgataga
    16201 ggaatatact ctcaagtttc ctattactta gataaaatgg agtctatgat tagttttaaa
    16261 gatacctttg taaagataat ggctcgctat tatcgtctgc tattggacta tatcgaaaat
    16321 ggtcgttcag acaaagaaaa agagataatc gaaacctaca ttcaatctat acaggaattg
    16381 atagatgatc agacagcttc gattatccgg gttcattttt taagatttga gtcttaaaaa
    16441 taagaagtta ggagaatggg gacaggattg gataatgggt caataacgat tggaattgat
    16501 agcaacaaag cgagtacaat aattgatata ttctttttca tagaacgcac ctctttttct
    16561 ttttagtata gcacaacatt ttatttgtta aaatgactta catatttgta agtttaaaaa
    16621 attgacttac agatttgtaa gtggacttta tttcgttttg aagatgatac aatgtagatg
    16681 tactataaaa aagataggag tagtcttatg aaaaagaagt tcttagcagt tactatgctg
    16741 ttttcattgg tttttccagc ttctttagtg tttgctgagt ctcatggaga ccactctagt
    16801 cacggagacc attctgaggc tgttgttatt agtgaaatgg ctgaaggtca gttgattgtg
    16861 gagcaacaaa tagaggttgc agcacagacg gagcctctat atagttttga agaaatctta
    16921 gatctaccaa atgaggcttt tccgaatgcg actcctgatg aggtggagag tattaaaggt
    16981 atgattgaag ccactatgga ttacaatcat tctgatatga aggtaccgtt atcaatggta
    17041 tatattgata agaccgcaga aaattcagat gcaattcttt caggcggtgg tcttccatac
    17101 tgtttagatg ataatggttg gggataccaa aattttatta cctcagattg taacatagct
    17161 atggcagttg ttagccaatg tgtttatgaa tctatcatta agaatcccaa tttgcgttac
    17221 tgtagagcgg atttatatag aaattgttct cctaggattg gtcacagtcc atattggcat
    17281 agacattaat aaatgtgttt gtataaaatt agaaggagtt gcaggttgat tcaaaaaata
    17341 ctaagactgt ttgggcttgt tagttgtctt cttgccttgg tttgtgcggt ggtatttaga
    17401 gaggggctgg tttccaatcc acttggtcaa ttttcgggtt ttccacttaa ccaccagcat
    17461 acaggttggg gaacatcgcg ttattatccc aacattgatc cgacagcaaa gccgactcag
    17521 gaggtcagag ttgctatcat tgactctggt ataagggaag aagcggtaga tgagttttat
    17581 gttgaggata tgcaagtttt ttccacttca acctctgtct ttgataccat tggtcacggg
    17641 acaaagattg ccagtatcat tggtgctaag aataatcatg tgctaacgct gggattgagc
    17701 ccggaagcaa gattgttttc ctacaaggta acggatgatg acgggacgat aaaaaatgac
    17761 taccttgtca aagctgttca gcaggctatt gaagatcatg ttgatgttgt gaatctgagt
    17821 atggtggtga ccaatccaag taaagaattg gaagatgtgg ttgaagccta ccttcaacaa
    17881 ggtggctata tggttgtccc agcttatgat ttgaaaaagg tagaggccct aaaccctctt
    17941 ttgacgattg aaggggttgt ctccgtaggt acctacaatg aattttttac gttattgaat
    18001 ccgcaggaag agattgctta ctacgcaccg tactctcaag aaacgctgtc aatggaaaac
    18061 aggattgtac gaagcgaggg ttcctctttt agcacggcct ttgtttcggg gacaattgcc
    18121 cacttgctct ccgtcggaca aaccgatgca gaaatcacca agcaactaga tgactttttt
    18181 agtgcacggt ctgtgaagag caagcagtct ccattgttgg ctggttatga aacgcatcaa
    18241 gctttggtaa ataacagcta cacagtgctc tctctatctc tgataggtct tcttgttttc
    18301 cagacaatcc tagggatact caccgcgaga aaagagagtg aggtgcgggg tgcttatatg
    18361 cggtacatcg ttgtaacgga cgtgttactg gttattcttg ccttgttaat tttgccgact
    18421 caaatgtgag gtgttagatg gaattaattt caattgtgtt cgttgtcctt attgttggag
    18481 ttcaagtcta tttttcgaca aggtactttg ctaaggctac ttccaagcta caaaaaggat
    18541 ttgtcgtcgt aacgtccctc tttcaaattg tattttcaat ctggttgatg ctgtttgtta
    18601 cactgggata tttcggtagt attcattttt gatgagattt ttttgcctcc tatactcata
    18661 ggaggttttc tatatttgaa aaatacttca agatagctta caatagagag tagcattg
//
LOCUS       DASFQS010000041        18514 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.041, whole genome shotgun sequence.
ACCESSION   DASFQS010000041 DASFQS010000000
VERSION     DASFQS010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18514
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.041"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(23..952)
                     /locus_tag="U1041_001163"
     CDS             complement(23..952)
                     /locus_tag="U1041_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEM4768276.1"
                     /translation="MKKTRIVEGLKTFCSTFFSFYRSADSDVTSVAVAYYLLISIFPI
                     LLTLANLLPYYPFDVDMILSVVAEFVPDKLYPSVSSFITSVLTKPSSSWLGISILTTL
                     WTLSRSMTILQKAFNKAYGINEHRDFIIGHLIGIFLGIGLQVIILLSITLLTFGQAVF
                     SYINKLVPIEDAWLKGLLSQTQLVGLMALFAALVMLYFFLPNVRIKKVRYVFPGTLFV
                     LLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVFMLWFIFMAQVLIIGAMINATVQ
                     SMQVEEFHARDGDIVSILNRLKARFTAIDKEWE"
     gene            complement(1000..1860)
                     /locus_tag="U1041_001164"
     CDS             complement(1000..1860)
                     /locus_tag="U1041_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013903404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl aminopeptidase"
                     /protein_id="HEM4768277.1"
                     /translation="MITIKSQREIDAMKRAGDVLAGIHIGLREIIKPGVDMWEVEEYV
                     RKTCKEKNVLPLQIGVDGELMDYPYATCCGLNDEVAHAFPRHYKLKEGDLLKVDMVLS
                     EPLDKAVVDVSKLNFNDVKAMKKITQTYRGGCADSCWAYAVGQVSEEVQNLMDVTKEC
                     LYRGIEQAVVGNRIGDIGAAIQEYAEGLGYGVVRDLVGHGVGPTFHEEPMVPHYGTKG
                     RGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVI
                     LTSQGEEGTY"
     gene            complement(1857..2429)
                     /locus_tag="U1041_001165"
     CDS             complement(1857..2429)
                     /locus_tag="U1041_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768278.1"
                     /translation="MTLWTRLAKFAYFETDRLYLRPFSFEDGESFYEIVSNPENLPFI
                     FPALEDRNIAFSTMVEKFMRSPLGNWALVDKYSERMIGALCFEKVDERQLSAELSYFL
                     KKDYWRRGLMTEAVRTLVYLAFYEFGLRELVIVTHEENVASQMVAKKAGLVQVAQYRG
                     SDRYSHKTRNYLKFSLKRAEFSLEMYEENK"
     gene            complement(2524..3783)
                     /locus_tag="U1041_001166"
     CDS             complement(2524..3783)
                     /locus_tag="U1041_001166"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEM4768279.1"
                     /translation="MRKIVINGGKTLKGSVTVSGAKNSVVALIPAIILADGIVTLDGV
                     PAISDVDSLVDIMETMGATVKRDGESLEIDPRGVKDMPMPFGKINSLRASYYFYGSLL
                     GRFGQAVVGLPGGCDLGPRPIDLHLKAFAAMGAKTTYEGEYMRLATNGQRIQGAHIFM
                     DVVSVGATINTILAAVKAEGRTVIENAAREPEIIDVATLLNNMGARIRGAGTDIITIE
                     GVDSLKGTRHQVIPDRIEAGTYIALAAAVGEGIRIDNVLYEHLESYIAKLEEMGVRMT
                     ISEDSIFVEKQEKLKAVSVKTSPYPGFATDLQQPITPLLLKAEGTGTIVDTIYEKRVG
                     HVQELANLGAKISTRNNHIAFEGPNQLTGTSVKATDLRAGAAMVIAGLMAQGRTEITN
                     IEFILRGYSNIVDKLTELGADIQLIED"
     gene            complement(3914..5113)
                     /locus_tag="U1041_001167"
     CDS             complement(3914..5113)
                     /locus_tag="U1041_001167"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEM4768280.1"
                     /translation="MSERKLFTSESVSEGHPDKIADQISDAILDAILAEDPDAHVAAE
                     TAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTKGEYGFSAESVGVHPSLVEQSP
                     DIAQGVNEALETRQDASQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRL
                     AELRKSGEIAYLRPDAKSQVTVEYDEDNQPVRVDTVVISTQHDPEVSQEQIRQDVIER
                     VIKEIIPAHYLDDQTNYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFS
                     GKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAHPVSVRIDTFGTSTVA
                     ESKLEAAVRQIFDLRPAGIIQMLDLKRPIYKQTAAYGHMGRTDIDLPWERLDKVDALQ
                     AVLQKIN"
     gene            complement(5541..6008)
                     /locus_tag="U1041_001168"
     CDS             complement(5541..6008)
                     /locus_tag="U1041_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000138511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine/deoxycytidylate deaminase family
                     protein"
                     /protein_id="HEM4768281.1"
                     /translation="MSTNRLAWDEYFAAQALLIANRATCKRAKVGAVLVKDNKVIATG
                     YNGSVSGTEHCLEQECLMIDGHCARTLHAEVNAILQGAERGIPKGFTAYVTHFPCLNC
                     SKQLLQVGCKRVVYINEYRMDDYAQYLYKEKGCELVHLPLEVVKQAIAEAEFI"
     gene            complement(6027..6764)
                     /locus_tag="U1041_001169"
     CDS             complement(6027..6764)
                     /locus_tag="U1041_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768282.1"
                     /translation="MNETRFLELFNDLDKVLRKVCGVADGEYADVGSMLTKAKELTRH
                     NPVEANWDKLYVARQLRNLMVHEKRTGLKEVAQPSQELITVLEKVIAQYQEPITIADY
                     LQKTQKIKPVIFEGKDKLIKALEIVEQEHFSKFPIFSDKVYQGLVSDKGLTNWLAKAS
                     KETGSIREKLVEASLEDVLACEEDSIQVIVLPITTHLYQVINHFEGRKRTTILVSRQA
                     SGKLHSPEDLVGIVTAQDLAEIYGMVD"
     gene            complement(6766..7800)
                     /locus_tag="U1041_001170"
     CDS             complement(6766..7800)
                     /locus_tag="U1041_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM4768283.1"
                     /translation="MKTLDYIVTLTNTPSPTGFTTDIMNYIKAEVESFGYAASKTAKG
                     GVLVTVPGENDQEHRMVTAHLDTLGAMVRAVKPDGRLKMDLVGGFGYPSIEGENCLIH
                     CAKNGKTFTGTILMHQTSVHVYRDASTAERNQTNMEIRLDEKVTNADETRALGIEVGD
                     FISFDPRTVVTETGFIKSRHLDDKVSVAILLHLLKVYKEEGVILPYTTHFYFSNNEEI
                     GYGANSSIPAQVVEYLAVDMGAMGDDQQTDEYTVSICVKDGSGPYHYELRQHLVALAE
                     RDGIPYKLDIYPYYGSDASAAMRAGADVKHALLGAGIESSHSYERTHLDSVVATERMV
                     DAYLKSAMVD"
     gene            7865..8821
                     /locus_tag="U1041_001171"
     CDS             7865..8821
                     /locus_tag="U1041_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     synthetase/biotin operon repressor"
                     /protein_id="HEM4768284.1"
                     /translation="MKTYQKIYLLLKEKDDYMSGEDLAQELGISRTSVWKAIRQLETH
                     GLTIEAARNRGYKLADGDLLLPDLIAEELQLPVYLKADSDSTQLDAKQGIESGHTSPA
                     LYLAPYQNKAKGRFGRPFYASKSGGIYMSLRLSPNVPFLEFKPYTILAAAAVVKAIQS
                     LCDLDVQIKWVNDIYLGHKKVAGILTEAISSMENQRVTDVIIGVGINVRIDDFPKELQ
                     QSAGNLFEEQPPFTRNQLITAIWKAFLETDEKELIALYKEKSLVVGQQVSFVENQVEF
                     KGTAIAVTDTGNLVIQLDNGKAKIISSGEISLTSWSASPPNE"
     gene            complement(8787..8975)
                     /locus_tag="U1041_001172"
     CDS             complement(8787..8975)
                     /locus_tag="U1041_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3272 domain-containing protein"
                     /protein_id="HEM4768285.1"
                     /translation="MKLPQFLFLAITTILAVYFMNASILTGDFLIAGIYAFIAYRNLH
                     FAYKVTKFIRLVEKQTKK"
     gene            complement(9172..10839)
                     /gene="dnaX"
                     /locus_tag="U1041_001173"
     CDS             complement(9172..10839)
                     /gene="dnaX"
                     /locus_tag="U1041_001173"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000283769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEM4768286.1"
                     /translation="MYQALYRKYRSQTFGEMVGQGVVATTLKQAIEQGKISHAYLFSG
                     PRGTGKTSAAKIFAKAMNCPNQVGGEPCNDCYICQAITEGSLEDVIEIDAASNNGVDE
                     IRDIRDKSTYAPSLATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHK
                     IPATILSRVQRFEFKSIKVTDIQAHLAQILIKEGISFDDQALTIIARRAEGGMRDALS
                     ILDQALSLSHDQTVTLEIAEEITGSISLRALDDYIASLRQADSVSALGHLQTLFDQGK
                     SMSRFATDLLHYLRDLLIVQTGGENTHLTAGFTENLALAQDRIFTMIELVTKGLADIK
                     SSPQPKIYAEMMTIRLAESGSTSGAMAELPADVVSQISSLQQQVADLQKQLSQLSSQP
                     SAVKPVSRKPQAPKKYRLDTSKVHAILQEAMENPALARENLTRLQNAWGEIIESLSGA
                     DRALLVGSQPVAANENHAILAFESPLNAEQTMKRDNLNTMFGNILSKAAGFSPQILAI
                     AQEDWVSIRAEFSAKAKGQKMQEREKEESPVPEEFGFLADTVEIVND"
     gene            complement(10839..11336)
                     /locus_tag="U1041_001174"
     CDS             complement(10839..11336)
                     /locus_tag="U1041_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEM4768287.1"
                     /translation="MMKQEKISTYQLLLAQLEALLGGETNALANLSNASALLNQALPN
                     SVFTGFYLYDGQELILGPFQGGVSCVHIALGKGVCGESASKRQTIIVDDVRLHDNYIS
                     CDASALSEIVVPMLKNGQLLGVLDLDSRLVADYDAIDQEYLEQFVALLVEKTDWNFAM
                     FGEKG"
     gene            complement(11434..13104)
                     /locus_tag="U1041_001175"
     CDS             complement(11434..13104)
                     /locus_tag="U1041_001175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4768288.1"
                     /translation="MKRSSRKKRIAKWSKLGLSLAAVTVLGGLVEPVGLTNFGLTKVY
                     ATEQADPALEARKAEIKTMIQSYRDLVGQIKALNPADYTEESWNRKYEGDVRIYLGAQ
                     SIATAYNDDLTFSSLRLDGVDSHQTLNELNATYMFGYHFVENSIPILKQAMADLVPIS
                     KSVETPIDTRPVGTPVEQPVEQPLETPVAPQPASGQPTVEERFDVLQIQYREDETDEF
                     MGDDVIKVYSSSPKKITPPAFEGYEIKEASVGENYLMYSKPISLPYEHRFAQVLTEQD
                     LQSHSNFLGGKIKVAQDSLRNGSVYTYILNYRRTSPVQQDPQAKRVRFEIVVKPDGAP
                     ESGFLSYDSISRRFVDLHPGESYTFPVDESKFEIRPNQKLTYSYDEVEAGKDYSISVR
                     PKAVTSQPAAKPIETPTAPQSAETPVVTSVDKPVEIPVDSSVTKPAETPAKSPAETPT
                     NQPSADRAEQSATEPTVLSEQDSQAGTVSPTGQSASEKQAPKQGDKEQAAPASPSKQA
                     TAKSAPTSQPQAKSLPATGEAHSVLHMTGMSLLGLAGLVVKRRSRKSS"
     gene            complement(13276..13545)
                     /locus_tag="U1041_001176"
     CDS             complement(13276..13545)
                     /locus_tag="U1041_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEM4768289.1"
                     /translation="MSIKQMVSMALVVWNLLVFITYGMDKGKARKNAYRISEKTLLLM
                     SYFGGGLGAWAGGTHFRHKTQKKYFQLAWAIGVLIDAVIMYWMWK"
     gene            complement(13633..14172)
                     /locus_tag="U1041_001177"
     CDS             complement(13633..14172)
                     /locus_tag="U1041_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4768290.1"
                     /translation="MPKQRILPHIILGIMGASGQMVTGKQITDYVQRDLGEFWQVAHS
                     QVYPELKRMTKEELITCHAVPGNEKEKQYAMTATGRQILDEWLSIPNEETPQQKDLFS
                     IKMFFIREKDDPRIPGLLQSQIELVTKHLKHLDSRKVELFSTKESIQDNYGHYLILTR
                     SIERNRAQLKWLEDTLAEM"
     gene            complement(14174..14803)
                     /gene="udk"
                     /locus_tag="U1041_001178"
     CDS             complement(14174..14803)
                     /gene="udk"
                     /locus_tag="U1041_001178"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEM4768291.1"
                     /translation="MTQKPIIIGVTGGSGGGKTSVSRAILDNFPNARISMIEHDSYYK
                     NQSHLTFEERILTNYDHPLAFDTDLMIYHISELLAGRSVDIPIYDYTQHTRSEKTYRQ
                     EPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDIRIIRRIKRDMEERGRSLDSIIEQ
                     YTSVVKPMYHQFIEPTKRYADIVIPEGVSNVVAIDLINTKVESILRERG"
     gene            14887..15873
                     /locus_tag="U1041_001179"
     CDS             14887..15873
                     /locus_tag="U1041_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM4768292.1"
                     /translation="MLNFGIIGTSDISHKFISSAHLSKYLQLSAIFSRKLETAMSFST
                     NYENVKLYTEWIKFLSAPIDLVYIASPNALHFEHAKAVLKAGKHAIVEKPMVSTPQEL
                     AQLRQIAKENGVFLFEAARNYHEEAIAIIRDFLKDKTVLGANFSYAKYSSKMPDLLAG
                     QTPNIFSTDFSGGALMDLGVYTLYTAIGLFGRPNAARYTAQQLPSSIDLNGTGQLTYD
                     DFLVSIQAGKNITSNLPSEIYTSEGTLTLNACQHISSAIFTKHDGSQVVLPIRAQEDA
                     MLEEVQAIAQAIQTGNHDLANEWLDVAESVHQTLYTMRQDAGIIFKADNNEI"
     gene            15863..16945
                     /locus_tag="U1041_001180"
     CDS             15863..16945
                     /locus_tag="U1041_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4768293.1"
                     /translation="MKSKFPSSWTDQLTLLGFEDFTPIQVQAFEPIANGKSLLAISPT
                     GTGKTLAYLWPSLLALTPKKAQQLLILAPNTELAGQIFDVCKTWSETIGLTAQLFLSG
                     SSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMNINTIVLDEFDQLFSDSQYQFV
                     EKIINYVPRDHQLIYMSATAKFDRQKIAEDIESIDLSEQKLDNIQHCYMMVDKRDRLE
                     TLRKFANIPDFRALAFFNSLSDLGASEDKLLYNGVNAVSLASDVNVKFRKVIIERFKN
                     HELNLLLATDMVARGIDIDNLECVLNFEVPFDQEAYTHRSGRTGRMGKEGLVITLVSS
                     PSELKQLKKYASVQEVILKNQELYKI"
     gene            complement(17012..18409)
                     /locus_tag="U1041_001181"
     CDS             complement(17012..18409)
                     /locus_tag="U1041_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEM4768294.1"
                     /translation="MKKVSFWLGINIALLGTMVSLAVWLFAGLQERQVSQFIEEKQQT
                     ILAKGKGKIQEGNIDTTHVVAALPTDDAGHVLGPVESRMISYVQRRFGHKKPAGKIQK
                     LVFVSSIEGKTNFKNVTAREIQAEHYKVDNLQIKKQDKLPSERVLLTQDNELFTLEDL
                     LPDLSSAASIIVDHLREALLAQGMKETDVEAIVKKFETLDLNAISFSYGDSQLTLQLP
                     DGYGINQLVLPISDLYPVVKSDYLVDADKVGYDEYMATQVVDKKHLRQVALTFDDGPN
                     PNTTPVVLDLLKKYNAKATFFVVGKAVAGNEAILRRMVAEGHVIANHTWNHPNLVTIS
                     GEQVQREIQDTQAAITEATGIVPTMVRPPYGSVNQAVVNQMELPSIYWSVDSKDWKSR
                     NPQAILKEIKEQTCPGSIILMHDIHQTTVDSLESVLQYLTGESYNMVTVTDLLASPLN
                     PLLIYYSQELSGPAQ"
BASE COUNT         5392 a         4384 c         3459 g         5279 t
ORIGIN      
        1 tttttgaaaa tagagttctt tctcactccc attctttatc tatcgctgta aatcttgcct
       61 ttagcctatt caagatagaa acaatatccc catctctagc atgaaactct tctacctgca
      121 tactttgaac cgtagcatta atcattgcac caatgatgag tacttgagcc ataaaaatga
      181 accaaagcat aaaaacaaga aagacgacag ctgttactat tctaaaatcc agcaacttat
      241 tagcataatt atcaacataa atcgaaaata actttccaat agaagtcatc gtcaacagaa
      301 caaacaacgt tcctggaaaa acatatcgaa ctttttttat ccgaacattt ggcaaaaaga
      361 aataaagcat aaccaaggcg gcaaacagag ccattaaacc tactaactgt gtttgactaa
      421 gaagcccctt cagccaggca tcttcaatag gaaccagctt attaatataa gaaaaaactg
      481 cctgcccgaa agtcaaaagc gtgatactta agaggataat tacctgcaga ccaattccta
      541 aaaatatgcc aatcaagtgc ccaataataa aatcacggtg ttcattgatg ccataagcct
      601 tattaaaagc cttctgcaaa atagtcatac tacgtgacag ggtccaaaga gtggtcagaa
      661 ttgaaatccc taaccatgat gacgacggct ttgttaatac agaagtgata aaagatgaaa
      721 ccgaaggata gagcttgtct ggcacaaatt cagctacaac cgataaaatc atatccacat
      781 caaatggata atatggcagt aaattcgcga gagttagaag aatagggaaa atagaaatta
      841 acaaatagta tgctactgca acgcttgtta catcgctatc agcagaacga taaaaagaaa
      901 agaaggttga gcagaatgtt ttcaaacctt caactattct ggttttcttc attctctcct
      961 ccttcctcat tcatctatta ttcacgacca caccgagaat taataggtcc cttcttcacc
     1021 ttgactggtc aaaataaccg gtccatcttt ggtgatgaca aattggtgtt cgtattgaca
     1081 agacaaacca ccatcaagtg tcttatgagc ccagccagtc ttcatatccg tatcaatttc
     1141 ccaagtccct gtattaatca ttggctcgat agttaaaacc atgccctcac gcaagcgaag
     1201 accacgacct ttagttccat aatgaggaac catcggctct tcgtggaagg ttggtccaac
     1261 gccgtgaccc accaagtcac gaacaacacc gtagccaaga ccttccgcat attcttgaat
     1321 agcagcaccg atatcgccga tacgattgcc aacaactgct tgctcgatac cgcggtacaa
     1381 acattcctta gtcacatcca tcaagttttg tacttcttca gacacctgac cgactgcata
     1441 ggcccaacaa gaatctgcac aaccaccacg ataggtctgg gtgattttct tcatagcctt
     1501 gacatcattg aagtttagct tagaaacatc aactaccgct ttatccaaag gctcgctcaa
     1561 aaccatatcg accttcagta aatcaccttc tttaagtttg taatgacgcg gaaaagcatg
     1621 agcgacctcg tcattcaatc cacaacaagt cgcataagga taatccatca attctccatc
     1681 aacaccaatt tggagtggca aaacattctt ttccttacac gttttacgga catattcctc
     1741 tacttcccac atgtccacgc ctggcttgat aatctctcgc aaaccaatat gaataccagc
     1801 cagaacatct ccagcacgtt tcattgcatc aatttctcgt tgtgatttaa tggtaatcat
     1861 ttattctcct catacatttc taaactaaat tcagccctct tcaagctaaa ttttagataa
     1921 tttcttgttt tatggctata gcggtcactt ccgcgatact gcgcaacctg taccaaacca
     1981 gcttttttcg ccaccatctg actggccaca ttttcctcat gagtgacaat aactagctcc
     2041 ctcagaccaa actcataaaa agctagatag actaaagtcc tcactgcttc cgtcatcaag
     2101 cctcttctcc agtagtcttt ttttaggaaa tagctgagct ccgcagaaag ttgacgttca
     2161 tctacctttt caaagcaaag cgcaccaatc atcctctccg aatacttatc aactaaggcc
     2221 cagtttccca atggtgaacg cataaatttt tcaaccattg tcgaaaaagc aatatttctg
     2281 tcctccaaag ctggaaagat aaaaggaaga ttttcgggat ttgatacaat ttcatagaaa
     2341 ctttctccat cttcaaaaga aaatggtcgt aaatacaaac ggtccgtttc aaagtaagca
     2401 aacttcgcta gtcttgtcca aagtgtcata gtgtacccaa ggggctgaga attactccca
     2461 gccccagatt gttttgtttt taaatcgatt acgttttgag aaagtagttc tcaattaggc
     2521 tctctaatcc tcaatcaatt gaatatctgc acctaattct gtcagcttat caacaatatt
     2581 tgagtaacca cgtagaataa actcaatgtt tgtaatttct gtacgccctt gagccattaa
     2641 accagcaata accattgcgg ctcccgcacg caaatcagta gctttaacag atgtaccagt
     2701 cagttgattt ggaccttcaa aggcaatatg gttgttacga gtagagattt ttgctccaag
     2761 atttgcaagc tcctgcacat gaccaacacg tttttcataa atcgtatcaa caatcgtacc
     2821 agtcccttct gccttaagca gtaaaggtgt aatgggttgc tgcaagtctg tcgcaaaacc
     2881 tggataaggt gaagttttca cacttaccgc cttcaatttc tcttgctttt caacaaaaat
     2941 actatcttca gaaatggtca tgcgaacacc catttcttcc aacttagcga tgtaactctc
     3001 taagtgttca taaaggacat tatcgatacg aataccttca ccaacagcag cagcaagggc
     3061 aatataagtc cctgcttcaa tacggtctgg aatcacttga tgacgtgttc cttttagact
     3121 gtctacgcct tcaatggtga taatatctgt acccgcacca cggatacgtg cccccatatt
     3181 attaagcaaa gttgccacat caataatttc aggttcacgc gccgcatttt caataactgt
     3241 acggccttct gctttgacag ctgctaagat agtattaatt gtcgcaccga cgctgacaac
     3301 atccatgaag atatgtgccc cttgaatacg ctgaccatta gttgccaagc gcatgtattc
     3361 accttcatag gttgttttcg cacccatggc tgcgaaggcc ttcaagtgca aatcaattgg
     3421 acgcggaccc aaatcacaac cacctggcaa gccaacaaca gcttgaccaa agcgaccaag
     3481 gagggaaccg taaaaatagt aggatgcacg caagctatta attttaccaa atggcatagg
     3541 catgtctttt acaccacgag ggtcaatctc caagctttca ccatcacgct tgaccgtcgc
     3601 gcccatggtt tccataatat caactaagct atctacatcc gagattgcag gcactccgtc
     3661 cagagtaaca atcccatctg caagaataat ggccggaata agagcaacaa ctgagttttt
     3721 tgcaccacta acggtaaccg accctttcag tgtttttcca ccattaatta caatttttct
     3781 catactagca ttcactttct taatttgcct aaaaaggcat acgtttcatt ttaccacaat
     3841 gggtggtaaa atgctagtta ttttatatat aaaaaaacag gaggcaagtc tgtctcctgt
     3901 tttgaaaata ttcctagttg atcttttgta gtactgcttg taaagcatct actttatcca
     3961 aacgttccca tggcaagtca atatccgtac gtcccatgtg tccataggct gcagtttgct
     4021 tgtaaatcgg acgtttgagg tccaacattt gaataatacc agctgggcgt aaatcaaaaa
     4081 tctgacgaac agctgcttct aatttgcttt ccgctactgt gctcgtacca aaggtatcga
     4141 tgcgaactga aactgggtga gcaacaccga tagcgtaagc caattgaact tccgcctttt
     4201 tagccaaacc agctgcgacg atatttttag cgatgtagcg tgccgcataa gatgcagaac
     4261 ggtccacttt ggtcgcatcc ttacctgaga aggcaccgcc gccatgacga gaataaccac
     4321 cataggtatc aacgataatc ttacgaccag tcaaaccaga atccccttga ggtccaccaa
     4381 tgacaaagcg acctgttggg ttgataaagt aattggtttg gtcatccaga taatgagctg
     4441 gaatgatttc cttgatcaca cgttcaatga catcctgacg aatttgctcc tggctaactt
     4501 ctggatcatg ctgggtcgaa ataacgaccg tatccacacg aacgggttga ttgtcttcat
     4561 cgtattcaac tgttacctgt gacttagcat ctggacggag ataagcaatt tcaccagatt
     4621 ttctcaactc ggccaaacga cgcaccaatt tgtgactaag tgaaattggc aagggcataa
     4681 gctcaggtgt ttcatctact gcaaaaccaa acatgagccc ctgatcacct gcaccaatca
     4741 aatccaatgg atcttgacta gcatcttgac gagtttccaa ggcttcattg acaccttggg
     4801 caatatctgg cgattgctct acaagtgacg gatgaacccc aaccgactca gctgaaaaac
     4861 catactcacc ttttgtatag ccaatctccg caatcgtatc acgtaccaca cggttaatat
     4921 ccacataggc agtggtggaa atttcaccaa agacatgaac actgcctgta taaacagccg
     4981 tctccgccgc tacgtgcgca tctggatctt ctgctaaaat agcatccaaa atggcatctg
     5041 aaatctggtc tgcaatctta tccggatgcc cctccgaaac agattcagac gtaaacaact
     5101 tacgttctga cataaaaatg tcccccttaa aatagaatat atgctagaaa cctagcgggt
     5161 tactaaggtt acaaagaact agtcgaagac tagttctttg taaaagacaa ctgtcttaag
     5221 caaagggaaa tcctatttgc gaaagacacc tgtcttgagc aagggaaaat ttccagatac
     5281 ccaacgagaa agacaatacc aaactgtatg aaatcagcct tatttgaaga aaatagtgac
     5341 tgaagtgtag taaagttttt acgcttacta ttcaatgtta ccagcttctt taattgtgtt
     5401 tcaagtgttt ttgcaaatat taactagtct ataaactacc ttttcgggac ttaataacgt
     5461 ttctagtata gcatatatta ggtgactatc ctagtatttt tctaaaaaat aaagagaggt
     5521 gtgcaagaca acctccctca ctaaataaat tctgcttctg caattgcctg tttaaccacc
     5581 tctagaggca aatgaaccaa ctcacagcct ttttctttat acaaatactg agcatagtca
     5641 tccatgcggt attcattgat ataaacaacc cgcttacaac caacctgtaa caattgctta
     5701 gagcagttga gacatgggaa atgggtcaca taggcagtaa aaccttttgg aattccccgc
     5761 tccgctcctt gtaaaatggc attgacttcc gcatgcaagg ttctagcaca atgaccatca
     5821 atcataaggc attcctgctc caaacaatgt tcggttcctg aaacagaacc attgtagcct
     5881 gttgcgataa ccttattgtc cttaaccaaa accgcaccga ccttggcccg cttacaagtc
     5941 gcccgattgg caattaaaag cgcctgagcc gcaaaatact catcccaagc taaacgattt
     6001 gttgacatga tttctccttt ctccactcaa tccaccatcc cataaatctc tgccaagtcc
     6061 tgggctgtga caataccaac aagatcctct ggcgaatgaa gcttcccact cgcctgacga
     6121 ctgactagga tggttgtgcg cttacgcccc tcaaaatgat taattacctg ataaagatgg
     6181 gttgttattg gtagaacaat cacctgaata ctatcttcct cacaagctag tacgtcttca
     6241 agactagcct ccaccaattt ttcacgtata gagcccgttt ccttacttgc cttggccaac
     6301 caatttgtca atcccttgtc agaaaccagg ccttgataaa ccttgtcaga aaaaatagga
     6361 aacttagaaa aatgctcttg ctccacaatt tctaaagcct ttatcaattt gtccttgccc
     6421 tcaaaaataa ccggcttaat tttctgggtc ttttgcaaat agtcagcaat ggtaatcggt
     6481 tcttggtact gggctatcac tttttccaaa acagtgatta attcctgcga aggttgggct
     6541 acttccttca aacctgttcg tttctcatga accatgagat tacgcaactg acgagccaca
     6601 tagagtttat cccagttcgc ctcaacggga ttatgtcgcg tcaattcctt tgccttggtc
     6661 aacatagagc ctacatctgc atattcccca tccgcaacac cgcacacctt acgcaagacc
     6721 ttatccaaat cattgaataa ctctaaaaaa cgggtttcat tcatcttaat ctaccattgc
     6781 tgatttcaaa taggcatcta ccatccgctc agtcgcaact acagaatcca aatgggtccg
     6841 ctcgtaggaa tggctggact caataccagc ccccaatagg gcatgcttga catctgcacc
     6901 tgctcgcata gctgccgaag catcggaacc atagtaagga taaatatcca gcttataagg
     6961 aattccatct ctttcagcca aggctaccaa gtgctgacga agttcataat ggtagggacc
     7021 tgagccgtcc ttgacacaga tagaaactgt atattcgtca gtttgctggt catctcccat
     7081 tgcccccata tcgactgcca aatattcaac cacctgagca ggaatgctgg agttggcacc
     7141 gtagccaatc tcttcattgt ttgaaaaata gaaatgtgtc gtataaggca agattactcc
     7201 ctcttcctta taaaccttca aaagatggag caagatagct acggatacct tatcatccaa
     7261 gtgacgactc ttgataaaac cagtttctgt cacgacggta cgaggatcga aggagataaa
     7321 atctccgact tcaataccta aggcccgcgt ctcgtccgca ttggtcactt tttcgtccaa
     7381 acgaatttcc atattggtct gattgcgctc agcggtactg gcatcccgat agacatggac
     7441 agaggtctgg tgcatgagaa tagtacctgt gaaagtcttg ccatttttag cgcaatgaat
     7501 caaacaattt tctccctcaa tagaagggta tccaaatcct cccaccaaat ccattttgag
     7561 tcggccatct ggcttcactg cacgaaccat ggcccccagt gtgtccaggt gagcagtcac
     7621 catgcggtgt tcctggtcat tttcccccgg aactgtcacc aaaacaccac ctttagcggt
     7681 cttactagca gcatagccga aactttcaac ctctgccttg atgtaattca taatatccgt
     7741 cgtaaaacca gttggcgacg gagtgttggt caatgtaaca atgtaatcaa gtgtcttcat
     7801 gaaaacctcc ttatttgaaa ctattatatc acgttttaga cgaatttttt gctataatga
     7861 agacatgaaa acctaccaga agatttattt actattaaaa gaaaaagacg actacatgag
     7921 cggagaagat ttggctcaag aattgggtat ttctcggact tcagtttgga aagccattcg
     7981 ccagttagaa acgcatggtt taactattga ggctgcccgt aatcgtggtt acaaattggc
     8041 cgatggggat ttgctactgc cagacttgat tgcagaggaa ctccaactgc ctgtctacct
     8101 gaaagctgac agcgactcca cccaactaga tgccaaacaa ggtattgaat caggtcatac
     8161 tagtcctgcc ctatatctag ctccctatca gaataaagcc aaggggcgat ttgggagacc
     8221 cttttatgcc tccaagtcag gcggcattta tatgtcgctt cgtctctctc ccaatgttcc
     8281 atttctagaa tttaagccct acaccatttt agctgcagct gccgttgtga aggccattca
     8341 atctctttgc gacttggacg tccaaatcaa gtgggtcaat gacatctatc tcggacacaa
     8401 aaaggtcgct ggcatcctca ctgaggctat ctcttctatg gaaaaccaac gggtaaccga
     8461 tgtcattatc ggtgtcggca tcaatgttcg catagacgat ttccctaagg aattacaaca
     8521 atctgctgga aaccttttcg aggaacaacc accatttacc cgcaatcaac tcattactgc
     8581 catctggaaa gctttcttag aaaccgatga gaaggaacta attgcccttt acaaagaaaa
     8641 atcacttgtc gttggccaac aagtgagctt tgtagaaaat caagttgaat ttaagggtac
     8701 tgccatcgct gttactgata caggaaacct ggttatccag ttagataacg gcaaagcaaa
     8761 aattatctcc agcggagaaa tcagccttac ttcttggtct gcttctccac caaacgaata
     8821 aatttagtca ccttgtaagc aaaatgaaga ttccgatagg cgataaaggc gtagatacct
     8881 gcaatcaaga aatctcctgt caaaatcgat gcattcataa aataaacagc taaaatagtt
     8941 gtaatggcta aaaaaagaaa ttgtggaagt ttcataaaat agattatacc aaaaattcag
     9001 tcaactggct gaatttttat atgctttctt gataggtttc gattcttttc taaacaagaa
     9061 aacaccaatc taattggtgc tttcttaagg agatatgaaa aatatttagg attgactata
     9121 gtataactcc tccaaaggat ttcttcatca gtcctaagac cgatattgct atcaatcatt
     9181 tactatctca acggtgtctg ctagaaagcc aaattcttct ggaacagggc tttcttcttt
     9241 ttctctttct tgcatttttt gccccttggc cttggctgaa aattcagccc gaatgctgac
     9301 ccaatcttcc tgagcaatag ccaaaatctg tggcgaaaag cctgctgcct tgctgagaat
     9361 attaccaaac atggtattga gattatcccg tttcatagtc tgttcagcat tgagtgggga
     9421 ctcaaaggcc aagattgcat gattttcatt agctgcaact ggctgggagc caacaagtaa
     9481 ggccctgtct gcaccagata aactctcgat gatttctccc caagcatttt gcaagcgagt
     9541 caaattttca cgcgccaaag ctggattttc catggcttct tgcaaaatcg catgaacctt
     9601 gctggtatcc aatcggtact tcttcggtgc ctgtggcttg cgtgaaactg gcttaacagc
     9661 actcggttga ctggagagtt ggcttaattg tttctgtagg tctgctactt gttgctgcag
     9721 actgcttatt tggctaacca catctgctgg tagctctgcc attgctcccg aagtagaacc
     9781 actttcagcc aaccgaatgg tcatcatttc agcgtaaatc ttgggttggg ggctagactt
     9841 gatgtccgcc agtcccttgg tcaccaactc aatcatggtg aagatccgat cctgagccag
     9901 tgctagattt tccgtaaaac cagcagtcag atgggtattc tcgccgcccg tctgcacgat
     9961 aaggaggtca cgcaggtaat gcaagaggtc cgtcgcaaaa cggctcatgc tcttgccttg
    10021 gtcaaacaag gtctgcagat gacccagtgc cgacacacta tccgcctgac gcagactggc
    10081 tatatagtca tctaaagcac gtagacttat tgagcctgta atctcctctg cgatttccaa
    10141 ggtaactgtc tggtcatggc tgagactgag agcctggtcg agaatagaca gggcatcccg
    10201 catcccccct tctgcccgac gggcaataat ggtcaaagct tggtcgtcaa aactgatacc
    10261 ctccttgatc aagatttgag ccaaatgggc ctgaatgtcc gtgaccttga tggacttgaa
    10321 ctcaaaacgt tgcaccctag ataaaatcgt tgcaggaatc ttatgcaact ccgtcgtcgc
    10381 taggataaag accacgttct ccgtcggctc ttccaaggtc ttcaagagag cattaaaagc
    10441 ccctgttgac agcatgtgga cctcgtcgat gatatatacc ttataggtcg caagactagg
    10501 tgcataagtc gatttgtccc gaatatcacg gatttcatcg acaccattat tggatgccgc
    10561 atcaatctca atcacatctt ccagactgcc ctcggtaatg gcttgacaga tatagcagtc
    10621 attacaaggc tcaccaccca cctgattggg acagttcatg gccttggcaa aaatcttggc
    10681 ggcagaggtc ttacccgtac cacgaggtcc agaaaaaaga taggcatggc taattttccc
    10741 ctgctcaatg gcctgcttga gcgtggtcgc caccaccccc tgccccacca tttctccaaa
    10801 ggtctggctc cggtatttcc gatataaagc ttggtacatt accctttttc tccaaacata
    10861 gcaaaattcc agtccgtttt ctccactaag agggcaacaa actgctctaa gtattcttgg
    10921 tcaatggcat cataatccgc taccaaccga gaatctaggt ccaaaacgcc cagtaactga
    10981 ccgtttttca gcatgggtac cacgatttcc gaaagagctg acgcatcgca agaaatatag
    11041 ttatcatgca gacgaacatc gtctacgata atggtctggc gtttagaggc agattcaccg
    11101 cagacacctt taccaagtgc aatgtgaaca caggaaacgc caccttgaaa aggtcctaaa
    11161 atcaattcct gaccatcata caagtaaaag cctgtgaaga cagaatttgg tagagcctga
    11221 ttgagcagag ctgaggcatt agacaaattg gcaagtgcat tggtttcgcc gcccaataga
    11281 gcctccaact gagccagtaa taattgataa gttgagattt tttcttgttt catcatagaa
    11341 acattatagc atagatgact agtctaggac agtaccgact gttagaaacc agcaaaaaac
    11401 gagacctatc gatctcgttt ataggatagc tgattaagac gacttgcgtg agcgtctttt
    11461 cacaactaga cctgctagac ccagtaagct catacctgtc atatgtaaga cagagtgagc
    11521 ttcaccagta gctggtaggg atttggcttg gggctgacta gttggcgctg atttggcagt
    11581 tgcctgtttg cttgggcttg ctggtgccgc ttgctcctta tctccctgtt tgggtgcttg
    11641 tttttctgat gctgactgac cagttggact tacagttcct gcttggctgt cttgctcaga
    11701 cagaacagtt ggctcagtag ctgactgttc tgctcggtca gcacttggct gattagttgg
    11761 tgtctctgct ggactcttgg ctggagtttc agctggtttg gtcactgacg aatcaacagg
    11821 gatttccact ggcttgtcca cagaagtaac aactggggtt tcagctgatt gaggggctgt
    11881 cggagtttca atcggtttag ccgctggctg acttgtcact gcttttggtc gaacactgat
    11941 actgtaatcc ttgcctgctt ccacttcatc ataggaatag gtcagtttct gatttggacg
    12001 aatctcaaat ttactttcgt ccactgggaa ggtgtagctt tctcctgggt gaaggtctac
    12061 aaatcgtcta ctgatactgt cataacttaa aaaaccgctc tctggtgctc catctggctt
    12121 gactacaatt tcaaaacgaa cccgtttagc ttgagggtct tgttggacag ggctggttct
    12181 tctataattt aaaatatagg tatagacgct gccattcctt aaagaatcct gagccacctt
    12241 gatcttacca ccgaggaagt tgctatgact ctgtaaatcc tgctcagtta gtacttgagc
    12301 aaacctatgt tcataaggta gcgaaattgg cttactatac atgagatagt tttcaccgac
    12361 agaagcttcc ttaatttcat acccttcaaa agcaggagga gtaatctttt ttggactgct
    12421 tgaatagacc ttgataacat catctcccat aaattcgtcg gtttcatcct cccgatactg
    12481 gatctgaaga acatcaaacc tttcttcaac tgtcggctga ccgctagctg gttgaggagc
    12541 taccggagtt tcgagcggct gctctactgg ctgttccaca ggggttccca ccggtctagt
    12601 gtctatcgga gtttcaaccg attttgaaat cgggactaaa tctgccattg cttgcttcaa
    12661 gattgggata gaattttcaa caaaatgata tccaaacata taggttgcat ttaactcatt
    12721 taatgtttgg tgactatcaa ccccatctaa tctcaatgaa gaaaaggtta aatcatcatt
    12781 gtaagcagta gcaatacttt gtgctccaag ataaatccga acatctcctt catatttcct
    12841 attccatgat tcttccgtat agtccgctgg attaagagct tttatctgac cgactagatc
    12901 acggtagctc tggatcatgg tcttaatttc agcctttctt gcttccaaag ctggatctgc
    12961 ctgttctgtt gcataaacct tggtcaaacc aaaatttgtc agtcccaccg gctcaaccaa
    13021 gcctcccaag acagtgaccg ctgccaaact cagccccagc ttgctccact tggcaatccg
    13081 cttcttccta gaacttcttt tcatatgaaa aacctccatt tatataaaac ttttatgcca
    13141 aaaggcacgc ttaccagtat actaaaaaaa aaaagcaacc tgtcaagcaa ttatgccctt
    13201 aatatgcaaa tattcggttc tttcataatt ttcagtcgat ttttcatatt ttcagaaaaa
    13261 gaaaaaggct tgcgcctatt tccacatcca gtacataatc actgcatcaa tcaatacccc
    13321 tatagcccag gctagttgaa aatacttttt ctgtgtctta tgccgaaaat gggttccacc
    13381 tgcccaggca cctagcccgc caccaaaata ggacatgagt aataaggtct tttctgaaat
    13441 ccgataggcg ttctttcttg cctttccttt atccatacca taggtgatga agacaagtaa
    13501 attccacact actagcgcca tactaaccat ctgtttgatt gacatacatt cctccaatta
    13561 agtcacattt cttcttactc taacataatc caaaacagga cacaagaaaa aacgattcgg
    13621 aaatccgaat cgttacattt ctgccagtgt atcctctaac catttgagct gggcacggtt
    13681 gcgttcaata gaccgtgtca aaatcaaata gtgtccataa ttgtcttgga tactttcctt
    13741 ggttgagaac agctcaactt tacgactgtc taggtgtttt aagtgcttgg tgactagttc
    13801 aatttgactc tgcaacaaac caggaatccg tgggtcatcc ttttcacgga taaaaaacat
    13861 cttgattgaa aacaagtctt tttgctgagg cgtttcttca tttggaatgg atagccattc
    13921 gtctaaaatc tgacgaccag tagccgtcat cgcatactgc ttttcctttt catttccagg
    13981 tactgcatga caagtaatca attcttcctt ggtcatacgt tttaattctg gatagacttg
    14041 gctatgggca acctgccaaa attcgcctaa atcacgttga acatagtcgg taatctgttt
    14101 gccagttacc atttgaccgc tagcacccat aatccctaat ataatatgag gtaatattct
    14161 ttgcttcggc atcttaacca cgctctctta atatactctc caccttggtg ttaatcaagt
    14221 cgatggctac aacgttgctg acgccttcag gaatgacgat atctgcatag cgcttggttg
    14281 gctcgataaa ctggtgatac attggtttca ccaccgaggt gtactgctca atgatactat
    14341 ctaagctacg gccacgctct tccatgtctc tcttaatgcg gcgaatgata cgaatatcgt
    14401 catcagtatc gacaaatatc ttaatatcca ttaaatcccg caaccgtttg tcttccaata
    14461 ctaaaatacc ttccacaata aatacatctt gtggttcctg acgataggtc ttctctgaac
    14521 gtgtgtgctg agtgtaatca taaatcggaa tatccactga acgtcctgct aatagctcac
    14581 tgatatgata aatcatcaaa tccgtatcaa aagccagtgg atggtcataa ttggtcaata
    14641 tccgttcttc aaaggttagg tgtgactgat tcttatagta agaatcgtgt tcaatcattg
    14701 atatgcgagc atttgggaaa ttatccagaa tggcacgcga cacacttgtc ttgccacccc
    14761 cagatccgcc ggttacgcca ataataatgg gtttctgagt catcatcatc tccttctatt
    14821 ttcaatacta ttttaccatg aaacatggta taatggaaag gataacacat aaagaaatga
    14881 gaatttatgc taaattttgg tattattggt acctcagaca tcagtcacaa gttcatttcc
    14941 tccgctcatt tgagtaaata tcttcaattg tcagcgatat tttcaagaaa actggaaaca
    15001 gctatgtcat tttcaacaaa ttacgaaaat gtaaaattat acacagaatg gataaaattc
    15061 ctttctgcac cgattgactt ggtctatatt gccagtccaa acgccttgca ttttgaacat
    15121 gcaaaagctg ttctcaaggc cggcaaacac gctatcgttg aaaagcctat ggtgtccaca
    15181 cctcaagaat tggcccagct tcgtcagatt gccaaggaaa atggcgtctt cctatttgaa
    15241 gctgcccgca attaccacga ggaagccatc gctattatta gggacttctt gaaggataag
    15301 actgttttgg gggccaactt ctcctatgcc aaatactctt ccaaaatgcc tgatctcttg
    15361 gcaggacaga ccccaaatat cttttcgact gatttttcag gcggagcctt aatggatctg
    15421 ggtgtctata cgctctatac tgccattggc ctctttggca gaccaaatgc agcccgatac
    15481 actgctcaac aactcccttc atccattgat ttgaatggga ctgggcaact gacttatgat
    15541 gattttctcg taagtattca ggctggaaag aatatcacta gcaatctacc aagcgaaata
    15601 tataccagtg agggaactct caccctcaac gcctgccagc atatcagctc tgctattttc
    15661 acaaaacatg atggtagcca agtagtccta cctatccgag ctcaggaaga tgctatgctg
    15721 gaagaggtac aagccattgc ccaagctata cagacaggca atcacgacct agccaatgaa
    15781 tggctggatg tggcagaaag cgtccatcaa acactttaca ccatgcgtca agacgcagga
    15841 ataatcttta aggcggataa caatgaaatc taaatttccc tccagctgga cggaccagct
    15901 taccctactt ggctttgagg actttactcc tatccaagtc caggcctttg agcctattgc
    15961 aaacggcaag tcccttctag ctatcagccc aacaggtaca ggaaaaaccc ttgcctacct
    16021 ctggcctagt ctattagccc taactcctaa aaaagctcaa caattgctca tcctcgcacc
    16081 aaatacagaa ctggccggcc aaatatttga tgtttgtaag acttggtcgg agacaattgg
    16141 gttgactgct caactattct tgtctggttc tagtcaaaaa cgccagattg agcgactaaa
    16201 aaaaggacca gaaatcctga ttggaacacc tggtcgtatt tttgagttga ttaaattgaa
    16261 aaaaatcaag atgatgaata ttaacaccat cgtcctagat gagtttgatc agctattctc
    16321 cgattctcaa tatcagtttg ttgaaaagat tatcaattat gtacctcgtg accaccagtt
    16381 aatctacatg agtgcaacag ctaaatttga ccgtcaaaaa attgctgaag acattgaaag
    16441 cattgattta tctgagcaga aattagataa tatccaacat tgctatatga tggtagataa
    16501 gcgtgaccgt ttggaaactc tacgtaagtt tgccaatatc cctgattttc gtgctcttgc
    16561 attttttaac agcctatcag accttggtgc aagcgaagat aaactactct ataatggtgt
    16621 gaatgcagtt tcattggctt ctgatgtcaa cgtaaaattc cgtaaggtca tcatcgaacg
    16681 tttcaaaaat cacgaactca atcttctact tgctacagat atggtcgcac gcggtattga
    16741 tattgataac ttagaatgtg tcctcaactt tgaagttcct tttgaccagg aagcctatac
    16801 tcatcgttct ggacgtactg gacgcatggg caaggaaggt cttgtcatca ccctagtctc
    16861 tagtcctagc gaactaaaac aattgaaaaa gtatgcctcc gtccaagaag tcattctcaa
    16921 gaatcaagag ctctacaaaa tataatgaac aatatgcaaa aggcttagaa ccagtgtttc
    16981 tactaacatg attctaagcc ttttatcatt cttactgggc tggaccagat aattcttgtg
    17041 aataatagat taatagagga ttgagaggac tggcgagtaa gtctgttaca gtaaccatat
    17101 tgtagctctc gcctgttaaa tattgcaata cagactcgag gctatcaact gttgtctgat
    17161 gaatatcatg cattaggata atacttcctg gacaagtctg ttcttttatt tctttcaaaa
    17221 tagcttgggg attgcgactc ttccaatctt tagaatcgac cgaccaataa atcgatggaa
    17281 gttccatctg attgacaaca gcctggttaa cagaaccata aggaggacga accattgttg
    17341 gtacaatacc tgtagcttca gtaatagctg cctgtgtatc ttgaatttct ctctgtactt
    17401 gctccccaga aatagtgact agattgggat gattccacgt atggttggcg atgacgtgcc
    17461 cttctgctac cattctacgg agaatagctt cattcccagc tacagcctta ccaacaacaa
    17521 agaaagttgc tttggcatta tattttttca gtaaatctaa aactaccggt gtcgtgttcg
    17581 gatttggtcc atcatcaaag gttagagcga cctgtctcaa atgtttctta tccacaactt
    17641 gtgtagccat atactcatca tagccaacct tatcagcatc tactagataa tcactcttca
    17701 ctactgggta caaatctgaa attggtagaa ccaactggtt gatgccgtaa ccatctggta
    17761 attgtaaggt taattggctg tctccataac taaaggaaat agcatttaag tctagtgttt
    17821 caaatttttt gacaatcgct tctacatcag tctctttcat tccttgagca agtaaggctt
    17881 ctcttagatg atcaacaata atacttgctg cagaggataa atcaggtaat aaatcttcca
    17941 gggtaaacaa ttcattgtcc tgcgtcaaca acacacgctc agacgggagt ttatcctgct
    18001 ttttaatttg caagttgtct actttatagt gctccgcttg aatttcacga gctgttacat
    18061 ttttaaaatt tgtttttccc tctattgatg aaacaaagac cagtttttga atttttcctg
    18121 ctggtttttt atgaccaaag cgtctttgaa cataggaaat cattcgactt tctacaggtc
    18181 ctaagacatg acctgcatca tctgtaggta aggcagccac aacatgggtc gtatcaatat
    18241 ttccctcttg aattttgccc ttgcctttag cgaggatggt ttgttgtttt tcctcgataa
    18301 actgactaac ctgtctttct tgaagtcctg caaataacca tacagccaaa cttaccattg
    18361 tgccgagcaa ggcgatgtta attcccaacc aaaaactaac ttttttcatc tccaacctcc
    18421 cattcaaaac atatataaac tatgctaaat catttaaagg ctcttgtcaa gacagttcta
    18481 taaaaactca taaaaagatt aggtaatact cttc
//
LOCUS       DASFQS010000042        18261 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.042, whole genome shotgun sequence.
ACCESSION   DASFQS010000042 DASFQS010000000
VERSION     DASFQS010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18261
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.042"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            223..2715
                     /locus_tag="U1041_001182"
     CDS             223..2715
                     /locus_tag="U1041_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HEM4768295.1"
                     /translation="MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVT
                     GTIADVIEGEDYRFYGNLVTHPKYGQQLQITRYERSKPTSAGLVKYFSSDHFKGIGRK
                     TAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
                     GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRF
                     RAGMLFSLIHRSMETGDTYVEARDLLEATLELLEKSRHTELDPAAVAHELTGLIADDK
                     VQQEGTKIFDNSLYFAEHGIHKNLTRLMGKNGFKPFPRADVEAAIAELESMSSLTYDD
                     IQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAP
                     TGRAARRMNELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQ
                     LFQHISSQTQVLIVGDAEQLPSVSPGQVLADLLKIDKLPSITLERIYRQSDDSTIVTL
                     ASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQILAPMY
                     RGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGY
                     ITDLLPAKYTDSKQDEITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILP
                     ITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAVKNAGTVRKTYLVPRFQGEMA
                     EQDSKEALAEKAESKTATTTQTQPPTQPDRKEQVKVVKENSQQLSLLDQDQPEKTSPQ
                     PTEYILTVDNLLTIDPMIGIEQADIEEFFRKR"
     gene            2821..3516
                     /locus_tag="U1041_001183"
     CDS             2821..3516
                     /locus_tag="U1041_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768296.1"
                     /translation="MKKIFNYSVLLLSVTCLLTACSAKKQESQTEATTSKTTQASTKQ
                     ASSSKPASSQETTTEANSSAEASQQNQETQNSQVEESVLSTETTHTQLLTLPATTIPD
                     SLVGKWQGSSQQARNIEVTISADGTFTTYEDFRLSENEEGEHLIHTYTARVTDLVEYA
                     PNHYLIREAEGEYSALLPGMTGLGGRIAPGFILEGGQYKVVMWGNPADPAVEAKYNLV
                     SEPNVFVTLDKVE"
     gene            complement(3930..4958)
                     /locus_tag="U1041_001184"
     CDS             complement(3930..4958)
                     /locus_tag="U1041_001184"
                     /inference="COORDINATES: protein motif:HMM:TIGR01167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4768297.1"
                     /translation="MSTKKTYLLRKTSIGLVSLAALAVVGTTVSANEIGVATAHGTGA
                     YADPIPTFNINTGELTAKGSSVLNSDYKPALDPSTVDITKHGEGVTAELPEVALGFDN
                     GEPYVYAHGTGVTASVELPALDPSTVDITKHGEGLTAPTLNEVAVALDENGLYFTNTP
                     VEAPTAEALPEVQVGGKDGEFYLYAKGEGATVELPTIDPATLGAPIETAKGESVTAPA
                     LPVAELPALETAKGESVTAEELPTVEVAKDEAGEYLFSKGASVTAAELPVIDPATLTV
                     APAQAPVVAPKVEAPKAEVAAAVPTAKAATSSAKLPETGEASTAVYFATALGLLGAAA
                     VLAKKQEN"
     gene            complement(5227..5403)
                     /locus_tag="U1041_001185"
     CDS             complement(5227..5403)
                     /locus_tag="U1041_001185"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4768298.1"
                     /translation="MPTIDPATVKATETKAAEKKTTSTASEKLPETGEVMTVLSLVGG
                     LGLLGSAALLKKRK"
     gene            5513..5755
                     /locus_tag="U1041_001186"
                     /pseudo
     CDS             5513..5755
                     /locus_tag="U1041_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008088453.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(5741..6661)
                     /locus_tag="U1041_001187"
     CDS             complement(5741..6661)
                     /locus_tag="U1041_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-6-phosphate kinase"
                     /protein_id="HEM4768299.1"
                     /translation="MIHLICPNPALDRTLLVEKIEKNIPLRPTEVRDYPGGKSFNVAY
                     ALRENGVTDYTIHTILGGQIGRYIQDLNVQKGNQLQVVENNQNTRTCNIYVETSTGDV
                     VLFYEKGFELTEDLLNQFTRQIENSLEAGDILVFSGSLMKGMPDDYIQRFIEKYPEVL
                     TIVDTSGPALQAAYQACPALIKINNEELKDIYPDLDEESPEDILRILKEVTPHENIII
                     TMGGKGSLAKIGQRYFRIQSPKKETRNPIAAGDFYLGLLVKGISQGQDPEIFLKEAAA
                     FATANCLNYFPEVEAEQFAEIAGKVVLEQV"
     gene            complement(6763..7389)
                     /locus_tag="U1041_001188"
     CDS             complement(6763..7389)
                     /locus_tag="U1041_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM4768300.1"
                     /translation="MKIAIIAANGQAGQTIAKEAVERGHQVTAIVRSENKSVAQEVIQ
                     KDAFALTKEDLAGFDVVVNAFGAWTPETLPDHARLAEHLATILAGSPTRLLVVGGAGS
                     LYLDESQTAMLKDTPDFPADYLPIAEAMGAGLDLYRQATAVNWTYISPAADFDAEGQK
                     AGAYTLAGEVFQVNAQGESYISYADYAVALVDIAEKGGYQQERISVLA"
     gene            complement(7514..7933)
                     /locus_tag="U1041_001189"
     CDS             complement(7514..7933)
                     /locus_tag="U1041_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM4768301.1"
                     /translation="MQISSRFTIASHILVLLALEGEKEKQTSTSIAGSVGVNPVIIRN
                     ILSQLKEAGLVQVARGVGGARLAQAPDKITLLQVYQAVELFGEKGKLFGFHEQPNPSC
                     QVGRNIHPLLDSRLENAQSALEKELGQTTIADLLAEL"
     gene            complement(7917..9011)
                     /gene="dinB"
                     /locus_tag="U1041_001190"
     CDS             complement(7917..9011)
                     /gene="dinB"
                     /locus_tag="U1041_001190"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEM4768302.1"
                     /translation="MLIFPLINDLSRKIIHVDMDAFFAAIEVRDNPALKGKPVIIGAD
                     PRLSGGRGVVSTCNYEARAFGIHSAMSSKEAYERCPQAIFISGNYEKYQEVGRQVREI
                     FHRYTDLVEPMSIDEAYLDVTENKLGLSSAVKIAKLIQYDIWNELHLTASAGVSYNKF
                     LAKIASDMEKPHGLTLILPEDAVGILASLPVEKFHGVGKKTVERLHEMGVYTGQDLLD
                     VPEMVLIDKFGRFGFDLYRKARGISNSPVKVDRVRKSIGKERTYRKLLYRDEDVLKEL
                     VSLCQRVAASLERNEKKGRTIVLKIRYGDFSTLTKRHSLEEPTNQAQVIEKEIRQLFE
                     EVGRAEKGVRLLGVTVTNFMEGESRIANFE"
     gene            complement(9340..15402)
                     /locus_tag="U1041_001191"
     CDS             complement(9340..15402)
                     /locus_tag="U1041_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941479.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4768303.1"
                     /translation="MRAYSKELFSKKNRYSIRKLTVGAASVIVGISLFSGGTVLAEGT
                     ALADTPVETIENNDVSNTNEGAVDQDSSQTDEVVATDIEAVRTELNFAQSESQEVAAE
                     WTPTSTPAGTVEVVEEEGIRYNRLSSVAGQDNSTNIGTFENSDLKMNADGSAEVSLSF
                     VERSEPEKARFGVYLNHTDQNKHVLVGYDKGGWFWEYKSPSGSTWYQGQRVPAPERNV
                     LYELSVNLTSTGEISASILSDSMTEAQELFAAQQIPEAAWNDLKNTRSAKLKVTSRDA
                     DRTVVDIVAKNQEGVSETASQPITNATTGTGTPITPTAPTTPTPVATENTAPTTIGPD
                     WRPASTVQGTVGVVEVNGVRYNALASTTSNNNSENVALFVKEGLTVDASDNANLAVTF
                     VENSEAGHGRFGVYLKHRDERNHIFVGYDNGGWFWEYKVNGQGNYLSNRSVQAPTKGS
                     TNRLEISYKSDGQLNATVNGQNLFDTYTVGTEVRQALANDKRIALKLGTYGQQLTKVN
                     VVADNQDGVKPVETTTEDAIVLNDSNVSYETLASDVLTAKIDRAFPRIKEYTMQGEKV
                     YGQVNPIRTLRINDYEVTPTVTFNKVSDRVAEYVLDVVDEAKKLNVAIKVKVEVAGNE
                     LHFDVTEVNNRNQVTPGQTIDDVAKLVQSISFANNNLVSVASTQAGAKFDGARMSTNT
                     HQTGDRHIDVQDNTPSSSAGFMYGFVSTDKLAAAVWSNSQHGTGGADDFTRLTANSER
                     YSLNGETGVHYGIASSPWQWQKAHNSVVYPAYTLELPSAKVVFTKDANEDNVVDWQDG
                     AIAYRQIMNNPKGHEYVPELVAYRIAMNFGSQAQNPFLMTLDGIKKIALHTDGLGQSV
                     LLKGYGSEGHDSGHLNYADIGKRIGGTEDFKTLIEKSQPYGAKLGIHVNASETYPESQ
                     YFSEEILRRHANGEYVYGWNWIDQGINISGHYDLAHNRLKRWEDLKKELGDGLDFIYV
                     DVWGNGQSGGENAWETHILSKEINMQGWRNAFEWGYAGEYDSTFQHWAADLTYGGYRL
                     KGINSNIVRFIRNHQKDSWVGDYPDYGGAANYPLLGGYNMKDFEGWQGRSDYNGYITN
                     LFANNLMTKYIQHFQVTNWKNGDPVRMRDNGETYTWVPEMEITLKDKANNTLVLTRKS
                     NDVKNEGYRQRTVTLNGRTIQDGVAYLVPWNWDANGNDLTSDKHKMYYFNEEAGATTW
                     TLPSDWTGNKVYLYKLTELGKTDVQELAVTNGQITIQVDANVPYVLYKSSQTNPEMSW
                     SDGMHIYDQGFNSGKLDHWTIDGDTSKATLVKSQGANDMLRIQGNTSKVSLSQKLTGL
                     KPNTSYAAYVGVDNRSRAKASITVNTGSSEVTNYTNESIALNYVKAYAHNTLRQNATV
                     DNTSYFQNMYVFFTTGDNVDNVHLTLSRDADAAATYFDEIRVFENDSTMFAGGHNTTA
                     GTFKQNFESVPQGIFPFVIGGIEGVEDNRTHLAEKHAPYTQRGWNGKKVDDVIEGTWS
                     LKTNGLTTRNSIVYQTIPQNFRFEAGKAYRVSFDYEAGSNGTYAFAIGEGRYNNDAGS
                     LTLNPLNNSWEDSDKAKKASFLVTGADSGNTWVGIFSTRRGGDTKGDTAGNANFRGYN
                     DFMLDNLVIEEVTLTGHLLTTDYYNLNTPVLNENYTQASLAPYKEALLAVSAAPEDIS
                     IEDARTLIATANTARQNLQVKKTAITNEDIGLAQANAQEGEELAKAFDGNPSTIWHTP
                     WNGRHINEPATVNLRRPVDIQRFEYVPRQSGRNGILKALTLVITDDQNVEHTFTGADW
                     PATSATKTIDFGKTIKAKKIVITGTASYGDTADQFMSAAEFRFLTPVQEEATLDKAAY
                     EAALTAARSAGKTALVKEVEDFMASVEAANLLTANILDATVARLNASETPANPGSGEK
                     PVDEPVKQDEDIVTAKGESTKADPLPLGELPPLVIAKGDSVKAEPLPAFDGGLVPNYA
                     PTAAALPSIDPASLAKEAASPKPAKATSATLPQTGETTEQGLLLAAGLVGLMAMAARR
                     RRFE"
     gene            15682..18027
                     /gene="pflB"
                     /locus_tag="U1041_001192"
     CDS             15682..18027
                     /gene="pflB"
                     /locus_tag="U1041_001192"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HEM4768304.1"
                     /translation="MSTKVKTKNVAEDIFAQAWEGFKGTDWQDKASVTRFVQANYTPY
                     DGDESFLAGPTERSLHIKKIIEETKAGYEDTRFPMDVDRATSIADIPAGFIDKDNELI
                     FGIQNDELFKLNFMPKGGIRMAETTLIENGYTPDPLLHEIYTKHATTVNDGIFRAYTA
                     DIRRARHSHHVSGLPDAYSRGRIIGMYARLALYGADYLMEEKVADWNAITEIDEESIR
                     LREEINLQYQALQQVVRLGDHYGVDVRKPAMNTKEAIQWTNIAFMAVCRVINGAATSL
                     GRVPIVLDIYAERDLARGTFTESEIQEFVDDFVLKLRTVKFARTKAFDEIYSGDPTFL
                     TTSMAGMGNDGRHRVTKMDYRFLNTLDNIGNSPEPNLTVLWSDQLPYSFRRYCMAMSH
                     KHSSIQYEGVTTMAKDGYGEMSCISCCVSPLDPESEDQRHNIQYFGARVNVLKALLSS
                     WNNGYDDVHKDYKVFDGVEPNTSEIFDYDQVIANFEKALDWLTDTYVDAMNIIHYMTD
                     KYNYEAVQMAFLPTHLRANMGFGICGFANTVDSLSAIKYAQVKPIRDEDGFIYDYEVT
                     GDFPRYGEDDDRVDDIAKWLMEAFFSRLNKHKLYKNAEATVSILTITSNVAYSKQTAN
                     SPVHRGVFLNEDGSVNTSKVEFFPPGANPTSKSRGGWLQNLNTLSKLNFKHANDGISL
                     TTQVSPKALGKTFDEQVNNLVTILDGYFEQGGQHVNLNVMDLNDVYDKIMAGEDVIVR
                     ISGYCVNTKYLTKEQKTELTQRVFHEVLSMDDHAAEVSGQA"
BASE COUNT         5078 a         4270 c         3658 g         5255 t
ORIGIN      
        1 tacactcaaa atctgaccta tatggctgat gcgaacgggt tcgcttcatt tccaacctcc
       61 aacagtcact actctgactg ttggagctgt gcgggttggg agtaaaatag tccagtggac
      121 tattttagcc cgaacctgca tatttggaag tgaggggaac tctttttggt ctatgcgagt
      181 tctttcccac tcccttttca ttattaattg gaaataaact ctatgaacga agtgtatttt
      241 accggtacta ttgaccggat tatttttgaa aatcctagta atttttataa aatccttctc
      301 cttgaaatcg aggagacaga cgcagactat gatgactacg aaattattgt gaccggaacg
      361 attgccgatg tcattgaagg agaagactat cgtttctatg gcaatctggt cacccatccc
      421 aagtatggtc agcaactaca aatcacgcgc tacgaacgca gcaagcctac ctcagctggt
      481 ctggttaagt atttctccag cgaccatttc aagggaatcg gtcgcaaaac ggctgaaaaa
      541 atcgttgaac tctatggcga agataccatt gataagattt tagctgaacc tgaaaaacta
      601 acccaaatca caggcctatc cagcaagaac atgcaggcat ttgtcgaaaa actccgcctc
      661 aattatggaa ccgagctgat cttggcaaaa ctagctgagt atggtattcc caataaattg
      721 gcctttcaaa tccaagacca atataaagaa aaaacacttc agattattga agaaaatccc
      781 tatcaactgg tcgaagatgt ccaggggctc ggctttacca ttgccgatag gattgcggaa
      841 aacctaggaa ttgccagtga ttcaccccaa cgttttcgtg ccggcatgct ctttagcctc
      901 atccatcgct ccatggaaac aggcgatacc tatgtggagg ccagagactt gctggaagct
      961 acccttgaac tgctggaaaa atcccgccat accgagctgg accccgctgc tgttgcccac
     1021 gagttgacag gactgattgc agacgacaag gtacagcaag aaggcacaaa gatttttgac
     1081 aacagcctct actttgccga acatggtatc cataaaaacc tgacccgcct gatgggaaaa
     1141 aatggtttca aacccttccc acgcgcagac gtcgaggctg ccatagcaga gctggaaagc
     1201 atgtcttctc tcacctacga tgacattcaa aaagaagcca ttgtccaagc cattaccaat
     1261 ccgcttttca ttctgacagg cggaccaggg actggaaaaa caacggttat caacggtatt
     1321 atcgcggtct atgccatctt gcataagatt gacctgactc gcaaccgaga agaatgccca
     1381 gtcctcctag ccgctccaac tggacgagca gccagacgga tgaatgaatt gacaggtctg
     1441 ccttccgcca ccatccaccg ccatctgggg cttgttgaag gacaggaaga atcctaccgt
     1501 gatgattatt tggatgccga ctttatcatc gtggatgagt tttctatggt cgacacttgg
     1561 ttggcaaacc agctcttcca gcacatctcc tcccaaaccc aagttctgat tgtcggcgat
     1621 gcagagcaat taccttctgt cagtcccggt caggtccttg ctgacctcct gaaaattgac
     1681 aagctaccca gcatcactct agaacgtatc tatcgtcaat ccgatgattc gaccattgtt
     1741 accctagcca gccagattcg ccaaggggct ctgccgagcg atttccgtga gaaaaaggct
     1801 gaccgctcct attttgaagc gcaaaacgaa caaattccag ctctgattga gcgcattgtc
     1861 ggcgcagcca tcaagtcggg aattcctgca aacgaagtcc aaatcctcgc tcccatgtac
     1921 cgtggtgctg caggtattga ccaactcaac accatgaccc aggccctgct caatccactg
     1981 gaagagggag agttagaatt cctccataac gagcaagcct tccgccaagg cgaccgggtc
     2041 attcatctag tcaacgacgc cgaagccaat gtcttcaatg gcgacttggg ctacatcact
     2101 gacctcctac ctgccaaata tacggactcc aagcaggatg aaatcaccat caacttcgac
     2161 ggtagcgagg tcacctatcc ccgaaacgaa tggtacaaaa tcacactggc ctatgccatg
     2221 tccatccaca agtcccaagg cagcgagttt caggtcgtca tccttcccat cacgcgcacc
     2281 agccaccgca tgctccagcg caacctggtc tacaccgcca tcacccgctc caagagcaaa
     2341 ctcatcctcc taggcgaaat ctccgccttc gactacgccg tcaaaaacgc cggcaccgtc
     2401 cgaaaaacct atctggtccc acgtttccaa ggggaaatgg cagagcagga tagcaaggaa
     2461 gctttagctg aaaaagccga aagcaaaaca gctacaacca cgcaaaccca gccccctact
     2521 cagccagaca gaaaagaaca ggttaaagta gtcaaagaaa acagccaaca actctccctt
     2581 cttgatcaag accagccaga aaaaacaagt ccccaaccca cagaatacat tttgactgta
     2641 gataacctac taaccatcga ccccatgatt ggcatagaac aggcagatat tgaagaattt
     2701 ttcagaaaaa gataacaaaa acatttcttt tgttacaaaa atgttacaaa tattacaatt
     2761 ttgtgttgac aagcttgttt ttatttgtta tactctgttt ataagtggag gtaagaacaa
     2821 atgaaaaaga tattcaacta ctccgtattg ttgctctctg taacctgtct attgacagct
     2881 tgttcagcaa aaaaacaaga aagccagaca gaagcaacca ccagtaaaac gacccaagca
     2941 agcaccaagc aggctagttc ctccaagcct gctagttccc aagaaactac aactgaagcc
     3001 aattcatcag cagaggctag tcaacaaaac caggaaactc agaactctca agtcgaagaa
     3061 agtgtcctaa gcaccgaaac gactcacact cagctcctaa ccctaccagc taccactatt
     3121 cccgacagtc tagttggaaa atggcaagga agtagccaac aagcgcgtaa tattgaggta
     3181 actatcagcg cagacggtac ctttactact tatgaagatt ttcgacttag tgaaaacgag
     3241 gaaggagaac acctcatcca tacctacaca gcacgagtta cagatctagt tgaatatgct
     3301 ccaaaccact acctaatccg cgaggcagag ggggaatatt cggctcttct ccctggaatg
     3361 actggattag gaggaagaat tgcaccagga tttatcctag aaggtggaca atacaaggtt
     3421 gttatgtggg gaaatcctgc tgatcctgct gtcgaagcta aatacaacct agtatcagaa
     3481 cctaatgttt ttgtaacctt ggataaggta gaataaccca aaggtttatt cccctattct
     3541 ctaacaaact taaaggaata ttcgtgcatc cctttccgag aagaagacaa acatcttatt
     3601 tacagtgttt gtctttttct attgttctct atttcgctct ccatagaaat aaagatcgga
     3661 gcaagtcaac aatagccacc tgttctttag aagagtagcg cacttgtgag gaaataggct
     3721 attttatgct caatgaaaat caatgggatc ctagggtcga cctgagttca gcaaggtaag
     3781 ttgactacag atatgtttaa tttcaaaaag tattaccgac taaggtaggc ttggaacaaa
     3841 gagtgtcatc atccttccca aatcctccca tctgcacaaa aataaggagg ggaaaccctc
     3901 cttaagtgtg attagttact gatgattgat tagttttctt gttttttggc aagcactgct
     3961 gctgcaccaa gaagtcctag agccgtagca aaataaactg ctgtagatgc ttctcctgtt
     4021 tctggaagtt ttgctgatga tgttgctgct ttagctgttg gtactgctgc agccacttct
     4081 gctttaggag cttcaacttt aggagctaca actggcgctt gtgctggtgc aactgtaagt
     4141 gttgctgggt caattactgg cagctctgct gctgttacac tagcaccttt agagaagaga
     4201 tactcacctg cttcatcttt agcaacttct acagttggta attcttcagc tgttacactt
     4261 tcacctttag ctgtttccaa agctggcaac tcagctactg gaagagctgg tgctgttaca
     4321 ctctcgccct tagctgtttc aataggagca ccaagtgttg cagggtcaat tgttggaagc
     4381 tctactgtcg caccttcacc cttagcataa agatagaatt ctccatcttt accacctact
     4441 tgcacttctg gaagcgcttc tgctgttgga gcctcaactg gtgtgtttgt aaaatacaaa
     4501 ccattttcat ccaaggcaac cgctacttca tttaatgttg gtgcggtaag gccctcacca
     4561 tgttttgtga tatctacagt acttgggtcc aaggctggca attctactga tgcagtcaca
     4621 cctgtaccgt gcgcataaac atatggctca ccattgtcaa aaccaagtgc tacttctgga
     4681 agttccgcag tcacaccctc gccatgtttt gtgatgtcca ccgtacttgg atccaaggct
     4741 ggtttgtagt cagagttcaa tacgctgcta ccttttgctg tcaattcacc tgtattgata
     4801 ttgaaagttg ggattggatc tgcataagca cctgtaccat gtgcagttgc tacaccaatc
     4861 tcattagctg atacagttgt tcctacaacc gcaagagctg ccaatgatac caaaccaata
     4921 gaggtttttc tcaaaagata tgttttcttt gttgacataa tgtcaccttc ccttatatat
     4981 aatctacatt tgaaataaag ctgagataat gtttcaccat tatccgtggc tcttatccta
     5041 accatcaccc tataaatgca atgattacag ttattatacc ccccccgata tttttgtcaa
     5101 gttttttatt gtatttttta tcattttctt tatgtaattt tttgaaaatt ttctcaaaat
     5161 ctttcttgtt tttctgaaaa taaaggggaa caaaaaggac catttaggtc cttttttgta
     5221 tgtagattat tttcttttct tgagcaaggc tgctgatcca agaagaccta ggccacctac
     5281 aagcgaaaga actgtcatca cttcaccagt ttctggaagt ttttctgatg ctgttgaagt
     5341 tgttttcttc tctgctgctt ttgtttcagt tgctttaact gttgcagggt caattgttgg
     5401 caaagcgact gccttaacgc tttcaccttt gacagtttcc aaagctggca atgttgcagt
     5461 tacacctgta cctttagctg tttctacagc accttcgctt gttggaaggt ctgttgtcac
     5521 gccagcctct gtccatgata tcaaggtggt ttatgagcta ttagaggggt gtaagcaatc
     5581 ggttatctta ggtgatttag gttacctgag cagtgaactc aagaaggact tagaacaaga
     5641 aggttaccat ctatggacgc catttcgaca aaacatggca ggggctgaag aacataacga
     5701 ttggaaagtg atggccatga gacgaactga ggaaatattt ttaaacctgc tctagaacaa
     5761 ctttacccgc tatctctgca aactgctctg cttcaacctc tgggaagtag ttaagacagt
     5821 tagcagttgc aaaggctgct gcctctttca agaagatttc agggtcttgt ccttggctga
     5881 tacccttaac tagcaagccc aggtaaaaat ctcctgccgc aatgggattg cgtgtttctt
     5941 ttttaggcga ctggatacgg aagtaacgct ggccaatctt agccaaactg cccttgcctc
     6001 ccatggtaat gatgatattc tcatgcggcg ttacttcttt tagtatccgc aaaatatcct
     6061 ctggactttc ctcatctaag tctggataga tgtccttgag ctcttcatta ttgatcttaa
     6121 tcaaggctgg gcaagcttga taggcggctt gtaaggctgg tccactggta tccacaatgg
     6181 ttagtacctc tgggtatttt tcaataaatc gctgaatata atcatccggc atgcccttca
     6241 tgagactgcc tgaaaagact aggatatcgc cagcctctag gctattttct atctgccgag
     6301 tgaattggtt gagcaaatcc tctgttagtt caaaaccttt ttcataaaat agtactacat
     6361 cgcctgtgct agtttctacg taaatattgc aggttcttgt gttctgatta ttttcaacga
     6421 cctgcaattg atttcccttt tggacattga ggtcctgaat gtagcgacca atctgcccac
     6481 ctaaaatggt atggatagtg tagtctgtca ctccattttc tcgaagtgca taggctacgt
     6541 tgaaactttt tccaccagga taatccctca cttccgtcgg tctcagggga atattctttt
     6601 caatcttttc cacaagaagc gtgcggtcta gggctggatt gggacaaatc aagtgaatca
     6661 tggggttctc cttttctttt atttatatta ttatactata tacaagtaaa aataaaaaga
     6721 taattcctct atgggaacta tcttttagtc catttaattt ttttatgcaa gtacagaaat
     6781 tcgttcttgc tggtagccac ctttttccgc aatgtcaacc aaagccacag catagtcggc
     6841 ataactaata tagctttcac cttgggcatt gacttggaaa acctcgccag ccaaagtgta
     6901 ggcacctgct ttttgtcctt ctgcatcaaa atcggctgcc gggctgatat aggtccagtt
     6961 aactgctgtc gcctgacgat agaggtctag accagcaccc atagcctcag cgattggcag
     7021 gtagtccgca gggaaatctg gtgtatcttt cagcatagct gtctggctct cgtctaaata
     7081 aagactgcct gcaccaccaa ctactaaaag acgagttgga ctaccagcaa ggatggtcgc
     7141 tagatgctca gcaagacgag cgtgatccgg caaggtttct ggtgtccaag caccaaaagc
     7201 attgactact acatcaaagc ctgccaaatc ttctttggta agagcaaaag catccttctg
     7261 gattacttct tgggctacgc tcttgttttc agagcggaca atggccgtca cctgatgacc
     7321 acgttctact gcttcctttg caatagtttg acctgcttga ccattcgctg caataatagc
     7381 aattttcata ttgatacctc acttgtttca ttgtaataac tttacttaca acgtaagtat
     7441 aaatcatttc ggttgtaacg tcaattgtta cagctcgaaa attaaaaaaa tcatcacaag
     7501 gatgattaaa tacctataat tctgccaata aatcagcaat ggttgtttgt cccaactctt
     7561 tttccagagc cgactgagca ttttccaaac ggctatctag cagagggtga atattgcgac
     7621 ctacttggca ggaaggattc ggttgctcat gaaagccaaa aagtttcccc ttttctccaa
     7681 ataactctac agcctgatag acttgaagga gggtaatttt atctggagct tgggccaagc
     7741 gtgcgccacc tacaccacgc gccacctgaa ccaaaccagc ctctttcaac tgggacagaa
     7801 tattgcggat gatgactgga ttgacaccta cactgcctgc aatgctagta ctggtctgtt
     7861 tttccttttc tccctccaag gccagcaaga ccaagatatg actagcgatg gtaaatctac
     7921 tcgaaatttg caattctact ttctccttcc ataaaattgg taacggtcac tcctagcaag
     7981 cgaacacctt tctcagcccg tccaacttct tcaaaaagct gacggatttc tttctctatt
     8041 acttgagctt gattggtcgg ttcttccaaa ctatgtcgct tagtcagggt tgaaaaatct
     8101 ccatagcgga ttttcagaac aatggttcgt ccttttttct catttctttc taaactagct
     8161 gccactcgtt gacagaggct gactagctcc ttcaagacat cttcatctcg ataaaggagc
     8221 ttgcggtagg ttctttcctt tccaattgac ttacgaacac ggtccacttt aacgggcgaa
     8281 ttagaaatcc ccctcgcttt ccgataaagg tcgaagccaa aacgaccaaa tttatctatc
     8341 aaaaccattt ctggtacatc tagcaaatct tgccccgtgt agacccccat ctcatgcagg
     8401 cgttccaccg tcttcttccc cacaccgtga aatttttcaa caggcaggga ggcgagaata
     8461 ccaacagcat cctcaggcaa aatcagggtc agcccatgcg gtttttccat atccgaggca
     8521 atttttgcca aaaatttatt gtaggaaaca cctgcggaag ctgtcaaatg gagttcattc
     8581 cagatgtcgt attgaatgag tttagcgatt ttgaccgcag agcttaaacc cagcttgttt
     8641 tctgtcacat ctagataggc ctcatcaatg gacatcggtt ccaccaagtc ggtatagcgg
     8701 tgaaaaatct ccctgacctg tcgcccaact tcctgatatt tttcataatt gccagaaatg
     8761 aaaatcgcct gaggacaacg ctcataggcc tcttttgagg acatagccga gtgaatccca
     8821 aaggcacgcg cctcataatt acaggtagac accactcctc taccgccaga tagtcttggg
     8881 tcagccccaa tgataacggg tttgcccttc aaagcaggat tatccctgac ctcaatggca
     8941 gcaaaaaaag catccatatc tacatgaata atttttctag ataaatcatt gattagggga
     9001 aatattaaca tggacactcc tttctgctcc taactactag acatattata gcctatctag
     9061 caaatttttt cataaagcga acattgacga gcaagtagta ctcaatgaaa atcaaaatca
     9121 gactagaaga gtcagatgta gatagaaccc ttctactttc gcatttttag atattagaat
     9181 tttcattaga attttcaaat gtataaactt agacgtgtcc tgtttctaat tccattttgc
     9241 tataagtttg tgaaaaggtt cgataaacaa tacaaaagag gcaggtccga gacccacctc
     9301 taatgtattt ggagaacaag ctatgttttt ctgaaatgac tactcaaatc gtcttcttcg
     9361 agccgccata gccattagac ctactaaacc agctgctagg agcaagcctt gttcagttgt
     9421 ttcacctgtt tgcggtaaag tagctgaagt agcttttgct ggttttggac tagcagcttc
     9481 tttcgccaag cttgcaggat caatacttgg aagagcagct gctgtaggag catagttagg
     9541 aactaagcct ccatcgaaag caggtaatgg ttctgcttta acactatcac cttttgcaat
     9601 cacaagcggt ggcaattccc ctaacggaag aggatctgct ttggtacttt cacctttagc
     9661 agtgacgatg tcctcatctt gtttgactgg ctcatcaact ggcttctcac ctgagcctgg
     9721 gtttgcaggt gtttcactag cattcaagcg agcaactgta gcatctaaga tatttgctgt
     9781 caaaagattt gcagcttcga cagaagccat aaagtcttcc acttctttga caagagctgt
     9841 cttacctgct gaacgtgctg cagtaagtgc tgcttcatat gctgccttat caagggtggc
     9901 ttcttcctga acaggtgtca agaaacggaa ttcagcagca gacataaatt gatctgcagt
     9961 atcaccgtat gaggcagtac ctgtaatcac aatcttctta gccttaattg tcttaccgaa
    10021 atcaattgtc ttagtagcac ttgttgctgg ccaatccgca ccagtaaagg tatgttccac
    10081 gttttgatca tccgtaatca ccaatgtcaa tgctttcaag ataccgttgc ggcccgattg
    10141 tcttggcaca tattcaaagc gttgaatgtc aactggtcta cgaaggttca ctgtcgctgg
    10201 ctcattaata tgacggccat tccatggtgt gtgccagata gtagaaggat tgccatcaaa
    10261 ggctttggct agttcttcac cttcttgagc gttagcctga gccaacccaa tatcttcatt
    10321 tgtgattgct gttttcttca cttgaagatt ttgacgggct gtattggcag tagcaatcaa
    10381 ggtacgagcg tcttcgatac taatatcctc aggagctgca gacactgcta acaaagcttc
    10441 tttgtacggt gccaaacttg cttgagtata gttttcattc aagactgggg tatttaagtt
    10501 atagtaatcc gttgtcaaca agtgaccagt caaggtaact tcttcgatca ccagattatc
    10561 cagcataaag tcattgtagc ctcggaagtt ggcatttcca gcagtatctc ccttagtatc
    10621 accaccacgg cgagttgaga agataccaac ccaagtattg ccagaatctg cacctgtaac
    10681 taagaaactt gctttcttag ccttatcact atcttcccat gaattgttca atggattcag
    10741 cgttaggcta ccggcatcat tgttataacg tccttcaccg atagcaaagg cataagttcc
    10801 attggaacca gcttcataat caaagcttac acgataggcc ttgccagctt caaagcggaa
    10861 gttttgtgga atagtttggt aaacaatgct attgcgagtt gtcagaccat ttgtcttgag
    10921 tgaccatgtg ccctcaatga catcgtccac cttcttacca ttccagccac gttgagtgta
    10981 tggagcatgt ttttctgcaa ggtgggtacg gttgtcctca actccttcaa taccaccgat
    11041 aacaaatggg aaaatacctt gcggaacact ctcaaagttt tgcttgaagg taccagcagt
    11101 tgtattgtga ccacctgcaa acatcgttga gtcattttca aagacacgaa tttcatcaaa
    11161 ataggttgct gcagcatctg catcgcgaga tagggtcaag tgtacattat ccacattgtc
    11221 tccagttgtg aagaagacat acatattttg gaagtaactt gtattgtcaa ctgtcgcatt
    11281 ctgtctcaat gtgttatgag cataggcttt aacgtagttc agagcaatag actcatttgt
    11341 atagtttgta acttctgaac tgcctgtatt gactgtaata ctagcttttg ctctactgcg
    11401 gttgtctacc cctacatagg ctgcatagct ggtatttggt ttcagaccag tcaatttttg
    11461 actgagacta actttggatg tattgccttg gatacggagc atatcgttgg caccttggga
    11521 tttgaccaaa gtagccttgc tagtatcacc atcaattgtc caatggtcta gcttacctga
    11581 gttaaagcct tggtcataga tatgcatgcc gtcactccag gacatctctg gatttgtctg
    11641 tgaagattta tagaggacat acggcacatt tgcatccact tgaatggtaa tttgaccatt
    11701 ggttactgcc aattcttgaa catctgtctt accaagctca gtaagtttgt agaggtaaac
    11761 cttgttacca gtccaatctg aaggaagggt ccaagttgtg gcacctgctt cttcgttgaa
    11821 gtagtacatt ttgtgtttgt cactggtcag gtcattacca ttcgcatccc agttccaagg
    11881 caccaagtaa gctactccat cttggattgt acgaccattc aaggttactg tacgttggcg
    11941 atagccttca ttcttgacat cgttggattt acgagttaat acaagtgtat tgttagcctt
    12001 atccttcaag gtgatttcca tctctggtac ccaagtgtaa gtctcaccgt tgtccctcat
    12061 acgaacaggg tcaccattct tccagttggt tacttggaag tgctggatat acttggtcat
    12121 gaggttatta gcaaagaggt ttgtaatata gccattgtaa tcactacgac cttgccaacc
    12181 ctcaaagtct ttcatattgt aaccaccaag aagtggatag ttggccgcac caccataatc
    12241 cgggtaatca ccaacccaag agtctttttg gtggttgcga ataaagcgaa caatgttact
    12301 gttaatacct tttagacggt atccgccata agtcaagtct gctgcccagt gttggaaggt
    12361 cgagtcatac tcacctgcat agccccattc aaaggcattt ctccaaccct gcatattgat
    12421 ttccttagaa agaatatggg tttcccaagc attttcgcca ccagactggc cgttacccca
    12481 tacatcgaca tagataaagt ctaagccgtc gcccaattct ttcttcaaat cttcccaacg
    12541 tttcagacgg ttgtgagcca aatcgtagtg accactgata ttgatacctt ggtcaatcca
    12601 gttccagcca taaacgtact cgccatttgc gtgacgacga agaatttctt cagagaagta
    12661 ttgggattct ggataggttt cagatgcgtt aacgtgaata cctaattttg cgccatatgg
    12721 ttgcgatttt tcaatcaaag tcttaaagtc ttctgtgcca ccgatacgtt taccaatatc
    12781 tgcatagttc aagtgaccag agtcatgacc ttcactacca taccctttaa gaagaacact
    12841 ttgtcccaag ccatctgtat gaagggcaat tttcttaata ccatccaagg tcatcaagaa
    12901 tgggttttga gcctgtgatc caaagttcat ggcaatacgg taagctacca attctggtac
    12961 gtattcatgc ccttttggat tgttcataat ttgacggtaa gcaatagcac cgtcttgcca
    13021 gtctaccaca ttgtcttcgt tagcatcttt tgtaaagaca accttagcac ttggtaattc
    13081 caaggtgtag gctggatata caacactgtt atgtgccttt tgccactgcc aaggtgagct
    13141 tgcaataccg tagtggacac ctgtttcacc atttagactg taccgttcgc tgtttgcagt
    13201 cagacgagta aagtcatctg caccacctgt accgtgttgt gaattgctcc ataccgcagc
    13261 agctagctta tcagtagaaa caaatccata cataaatcct gcactagagc ttggtgtatt
    13321 gtcttgcacg tctatgtgac gatcacctgt ttggtgagta ttggtagaca tacgtgcacc
    13381 gtcaaactta gcaccagcct gtgtgctagc taccgatact aagttattat tggcaaagga
    13441 gatactttgt accaatttag cgacatcatc aatggtctga ccaggagtta cttggttacg
    13501 gttgtttact tctgtcacat caaagtgcaa ctcatttcca gcaacctcta ccttaacctt
    13561 gatagcgaca tttagtttct tagcttcatc aacaacatct agaacatact ctgcaactct
    13621 gtcacttacc ttattgaaag taactgttgg tgtaacttcg taatcattga ttctgagggt
    13681 acggattgga ttgacctgac cataaacctt ttcaccctgc atcgtatatt ctttgatacg
    13741 tgggaaggca cggtcaatct tagcagtaag aacatctgaa gcaagggtct cgtaggaaac
    13801 attgctatca tttagtacaa ttgcatcttc tgttgttgtc tcaactggtt tgacgccgtc
    13861 ttggttgtct gcaaccacgt taaccttggt tagttgttgg ccataggtac ccaatttcaa
    13921 agcaatgcgc ttgtcatttg ccaaggcttg acgaacttct gttccgactg tataggtatc
    13981 aaataagttc tgaccattga cagtcgcatt taattgtccg tctgacttat aagaaatctc
    14041 taggcggttg gtgcttccct tagttggtgc ttgaacactg cgattgctga gataattgcc
    14101 ttgaccattt accttgtact cccagaacca tccaccgttg tcatagccga caaagatatg
    14161 gttgcgttca tccctgtgtt tcaaatagac accaaaacga ccatgaccag cttctgaatt
    14221 ttccacaaag gtcactgcaa ggttggcgtt gtccgaagca tctactgtca aaccttcttt
    14281 aacaaacaag gctacattct cagaattgtt attagatgta gtagaagcaa gggcattata
    14341 gcgaacacca tttacttcta cgacaccaac tgttccttga acagtcgatg ctggacgcca
    14401 gtctggtcca atggttgtag gagctgtatt ttcagttgct actggggttg gtgtagttgg
    14461 agcagtaggt gttataggtg tccctgtacc agttgtggca ttcgttattg gctggctagc
    14521 agtttctgaa actccttctt ggtttttagc aacaatatct accactgtac ggtcagcatc
    14581 acggctagtt acttttaatt ttgctgagcg tgtattcttc aagtcattcc aagctgcttc
    14641 aggaatttgc tgggcagcaa ataattcctg agcttcagtc atggaatctg aaagaataga
    14701 tgcagaaatt tccccagtag atgttaggtt aacacttaac tcatagagaa catttctttc
    14761 aggagctggt acccgttgtc cttgatacca cgtgcttccg cttggagact tgtactccca
    14821 gaaccaacca cctttatcat atccgactaa gacatgttta ttttgatcag tatgattgag
    14881 ataaacacca aagcgagcct tttctggctc agaacgttct acaaatgaca atgatacctc
    14941 cgcactgcca tctgcattca tcttcaagtc agaattttca aatgttccaa tatttgtcga
    15001 attgtcctga cctgcaacag aggacaagcg gttgtaacga attccttctt cttcaaccac
    15061 ctcaactgta ccagccggtg tagaagttgg cgtccattcc gcagcgactt cttgagattc
    15121 tgactgggca aaattcaatt ccgtccgtac tgcttctata tccgtagcaa ctacctcgtc
    15181 tgtttgggag ctatcttgat ccacagctcc ttcatttgta ttgctaacat cattgttttc
    15241 tatcgtctca acaggagtat cggcaagcgc tgttccctct gccaatactg ttccacctga
    15301 aaatagagaa attcctacga taactgacgc cgcacctact gtcaattttc taattgaata
    15361 tctattcttc ttagaaaata attccttaga gtaagctctc atcgtctgcc tcctttttat
    15421 cttttgttat taatataata tacacataca ttctacatga tagcgctttc tttgtcaata
    15481 tatcaatcca ttatatttga ctgttcttaa atattttaat ataatgatgt ctcgagagac
    15541 cgatgactgg attattggat ttatattcca ctacttggaa aaaattccaa tttatttttc
    15601 agtgttttgt cttgaagaaa gtgcttacat atgatatact aaaatatgtg aaaagtaaca
    15661 atatcttaaa ggagaaccct catgtcaaca aaagttaaaa caaaaaatgt tgctgaagac
    15721 attttcgccc aagcctggga aggctttaaa ggtacagatt ggcaagataa ggcaagtgta
    15781 acacgcttcg ttcaagccaa ctacactcca tacgatggag atgaaagctt cctcgcaggc
    15841 ccaactgagc gttcacttca tatcaaaaaa atcatcgaag aaacaaaagc tggctacgaa
    15901 gacactcgct tcccaatgga cgtagatcgt gctacttcta tcgctgacat cccagcaggt
    15961 ttcatcgata aagataatga attgattttc ggtatccaaa acgatgaact cttcaaactc
    16021 aacttcatgc caaaaggtgg tatccgtatg gccgaaacaa ctcttatcga gaacggctac
    16081 actccagatc cacttcttca tgaaatctat acaaaacacg caacaactgt aaacgatggt
    16141 atcttccgtg cttatacagc tgatatccgt cgcgctcgtc actcacacca cgtttctggt
    16201 cttccagacg cttactcacg tggtcgtatc atcggtatgt acgctcgttt ggcactttac
    16261 ggtgcagact acttgatgga agaaaaagta gctgactgga atgcaattac tgaaatcgat
    16321 gaagaatcaa tccgtcttcg cgaagaaatc aaccttcaat accaagcatt gcaacaagtt
    16381 gtacgcttag gtgatcacta tggtgttgat gtgcgcaaac ctgcgatgaa cacgaaagaa
    16441 gcgatccaat ggacaaacat tgccttcatg gcagtctgcc gtgttatcaa cggtgccgca
    16501 acttctcttg gtcgtgtgcc gattgttctt gacatctatg cagaacgtga cttggctcgt
    16561 ggtacattta ctgaatctga aatccaagaa tttgtcgatg acttcgtatt gaaacttcgt
    16621 acagtgaaat tcgctcgcac aaaagccttt gacgaaatct actctggtga cccaacattc
    16681 ttgacaacat ctatggcagg tatgggtaac gatggtcgtc accgtgttac taagatggac
    16741 taccgtttct tgaacacact tgacaacatc ggtaactctc cagaaccaaa cttgacagtt
    16801 ctttggtcag accaacttcc atattcattc cgtcgctact gtatggcaat gagccacaaa
    16861 cactcttcta tccaatacga aggtgtgaca acaatggcga aagatggtta tggcgaaatg
    16921 tcatgtatct cttgctgtgt atctccactt gatccagaaa gcgaagacca acgccacaac
    16981 attcagtact tcggtgctcg tgttaacgtt cttaaagctc ttctttcaag ctggaacaac
    17041 ggctacgacg atgttcacaa agattacaaa gtgttcgatg gggttgaacc aaatacttct
    17101 gaaatctttg actacgatca agttattgcc aactttgaaa aagcccttga ctggttgact
    17161 gacacttatg tagatgcaat gaacatcatc cactacatga ctgacaagta caactatgaa
    17221 gcagttcaaa tggccttctt accaactcac cttcgtgcta acatgggctt cggtatctgt
    17281 ggcttcgcaa atactgttga ctcattgtct gctatcaagt acgcacaagt aaaaccaatc
    17341 cgtgacgaag atggcttcat ctacgattac gaagtaactg gcgacttccc acgttatggt
    17401 gaggatgacg accgtgtaga tgacatcgcg aaatggctca tggaagcatt cttctctcgc
    17461 ttgaacaagc acaaattgta caagaatgct gaagcaactg tgtctatctt gacaatcact
    17521 tcaaacgttg cttactctaa acaaacagct aactcaccag ttcaccgcgg tgtattcctc
    17581 aacgaagatg gttctgttaa cacttctaaa gtggaattct tcccaccagg tgccaaccca
    17641 acttctaaat ctcgtggtgg ttggttgcaa aacttgaata ctctttctaa actcaacttc
    17701 aaacatgcca acgacggtat ctcattgaca actcaggttt caccaaaagc tcttggtaag
    17761 accttcgatg agcaagtgaa caacttggtg acaatccttg acggatactt cgagcaaggt
    17821 ggtcagcacg tcaacttgaa cgttatggac ttgaacgatg tttatgacaa gattatggca
    17881 ggtgaagatg ttatcgttcg tatctctgga tactgcgtaa acactaaata cctcactaaa
    17941 gaacaaaaaa ctgaattaac tcaacgtgtc ttccacgaag ttctttcaat ggacgaccac
    18001 gctgctgaag tttcaggtca agcttaatca agcaaacaca aaaggacttg tacatgcagg
    18061 tccttttact atgtcgaaaa atctactgag tgttgcggaa ggatagttat agtcgaatga
    18121 attagctttc agacaaggaa ctgaggtgca ggttgctaga acagcataaa ggctgttcta
    18181 ggttggaaat aatacctgcg aagcaagtca cttctgcaga gtacggcaag ccgaaagtga
    18241 cgatgtatca aagttaattc a
//
LOCUS       DASFQS010000043        18198 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.043, whole genome shotgun sequence.
ACCESSION   DASFQS010000043 DASFQS010000000
VERSION     DASFQS010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18198
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.043"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            81..818
                     /locus_tag="U1041_001193"
     CDS             81..818
                     /locus_tag="U1041_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4768305.1"
                     /translation="MLNIFVLEDDFFQQSRLENAIRQCVEETSVRYKFLEVFGKPNQL
                     LESIEEAGNHQFFFLDIEIKGEEKKGMEIAKEIRARDPYAVIVFVTTHSEFMPVTYRY
                     RVSALDFIDKGLEDSDFQKAVSDVLVHAFENIDHTIAENSFVYKTETAHIQVPFSDIL
                     YFETSSTIHKVILKTKTGQTEFYGKVSDLAKADERLYQAHRSCVVNPLNITKLDRANH
                     IAYFENGDSCFVSRLKQKKLADLLEID"
     gene            818..2158
                     /locus_tag="U1041_001194"
     CDS             818..2158
                     /locus_tag="U1041_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HEM4768306.1"
                     /translation="MNIFISPFYDTVFFIDMLIRLMILQQISGLFLSKKKKCFIASCL
                     TVCQIILYDIYLLLEPFSFLIVIPFFKTNWNRTQKIFYGLLPFVIGDMFQRIISLYLR
                     FIFDVDIVYANASAMFEILLSILLIPFYYGFFKGLRIESKYLQVDTLDKKFRGIFLGL
                     NILFITYFLLIRGNLFLEVLMDKGIVDIKIDTYFIRTNILLLYFILFTVSMLYLNYQK
                     KEKQEKEIQELKDKQLTDLGRYSRHVESLYKEIRSFRHDYTNILISLNEAIKEEDIVA
                     IRTIYSEVIADSDRKFYDGKYDIARLSNIQNPAVKSLLSSKMLEAQKKGITISVEVDV
                     EIEQPALELIEFITILSILLDNAIDAAKQCANGNIVFAYFQEDDRKIVVVENTTVEDK
                     VSTNHIFEYGHSTKGDNRGIGLANVKAILDSYPKFSISTNSNNHRFVQELVFIE"
     gene            2319..2477
                     /locus_tag="U1041_001195"
     CDS             2319..2477
                     /locus_tag="U1041_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014295301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin"
                     /protein_id="HEM4768307.1"
                     /translation="MNTLKTYFKGNKKTIYMVLIIVGLLTIYPPIFQTIYQAGRDFGR
                     SFVNAVLP"
     gene            2518..2679
                     /locus_tag="U1041_001196"
     CDS             2518..2679
                     /locus_tag="U1041_001196"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768308.1"
                     /translation="MKKMKTVKDSQPWSEREKVLLLLLLVSVIDIPSLIDTLYQIGYE
                     FGQALALWF"
     gene            2753..2920
                     /locus_tag="U1041_001197"
     CDS             2753..2920
                     /locus_tag="U1041_001197"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768309.1"
                     /translation="MIWLIKLLLVVVISIPVTSILQPFQNHYLNGVTVGVISVIVSHL
                     VDKYGKGGDEV"
     gene            3227..3388
                     /locus_tag="U1041_001198"
     CDS             3227..3388
                     /locus_tag="U1041_001198"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768310.1"
                     /translation="MNILKTIVKHRHFRSLLVGLGAGAIICLWGVYYGMIYLFSYLVI
                     RGVIYMFKK"
     gene            3406..3615
                     /locus_tag="U1041_001199"
     CDS             3406..3615
                     /locus_tag="U1041_001199"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768311.1"
                     /translation="MTVKKKIAMTEEQLLHVAMIVYTLYVLYLLVTKNFTSRFITPYG
                     LYLFILVEEKLEKFIKKLYHNLMNQ"
     gene            3726..3935
                     /locus_tag="U1041_001200"
     CDS             3726..3935
                     /locus_tag="U1041_001200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768312.1"
                     /translation="MKEKKELVITGKHVLHTTMIVYTFFIGFAFIRQDLELPMLIPYG
                     FYLLTLILEKMEKSGKSLFEIRIER"
     gene            3963..4178
                     /locus_tag="U1041_001201"
     CDS             3963..4178
                     /locus_tag="U1041_001201"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768313.1"
                     /translation="MKKINKAIMVEITCTILFILYGLATILSDIGVIPFSEPIPLTIV
                     ICIYLGILGNIETNRLNSENDKNGHSK"
     gene            4162..4425
                     /locus_tag="U1041_001202"
     CDS             4162..4425
                     /locus_tag="U1041_001202"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768314.1"
                     /translation="MVIQNKTKTRRNENGKQTSNDDYQRKNKIMQFLQGLVEGILVTA
                     VLIHLVAWLVLGKTVDVFSSNFYPMLFIALYFLMKVNKTKKED"
     gene            4429..5130
                     /locus_tag="U1041_001203"
     CDS             4429..5130
                     /locus_tag="U1041_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4768315.1"
                     /translation="MKRIKNILKFIGLILVIIAINITPMRLIAIQDSMSGAMQWVSGI
                     GYLVIATAMVVWTWKRYKKGLPDQQKRFTFTWKDFGFALLFFLAGRVVGIGGTLLTQL
                     VTGNATTANDAALLATNEQLAKMFPLYFIAFHIAIGVFAPFMEELVFRGLFSRYFFKE
                     NQKWLKLIISSAVFALLHAIHPIELPLYFLLGAVFYLAYARRGNIVDAILVHILNNSL
                     MVIFSIIGYLLVLFG"
     gene            5152..5346
                     /locus_tag="U1041_001204"
     CDS             5152..5346
                     /locus_tag="U1041_001204"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768316.1"
                     /translation="MTMMEKLDKKYQEFETAYESSPFAMKFLVWVGVALTLMTLGSVL
                     VPAIYSAGQDFGAFLYSVFG"
     gene            complement(5441..5782)
                     /locus_tag="U1041_001205"
     CDS             complement(5441..5782)
                     /locus_tag="U1041_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEM4768317.1"
                     /translation="MVYEVHLSAKAEQDLEEIYQYYVREFSESSARKVLASLSTAILT
                     LEIFPEGYIDLDARLGRALFPEGKTRMIPGKQHLIFYLIRDSRVDILRIRGARTDYLN
                     NLDNLFKQTLK"
     gene            complement(5772..6059)
                     /locus_tag="U1041_001206"
     CDS             complement(5772..6059)
                     /locus_tag="U1041_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HEM4768318.1"
                     /translation="MAGLVRDRQYNFRVNAQLLEQAKIILSEKDMTLSDALNLFVERV
                     VEEQDLPIKTVEEVRAEAFLDELIAELDEGYQEVLSGHTTPAREVFAKYGL"
     gene            7034..7708
                     /locus_tag="U1041_001207"
     CDS             7034..7708
                     /locus_tag="U1041_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4768319.1"
                     /translation="MKIIKSVGLAVGTLLLTLLIQFPVYVGITAFQENMLLKLAVMIG
                     LGLAILALLSVIRRGMVKNQVFSREKLNIFKIVGMTALVFAGQTCLNLLWQYLGLSLS
                     DSNALDIVNQLNSDNFWVMALSVVLFAPVLEEFLYRGILLEKTAQYFPKYPQMVIVFS
                     ALLFAYCHTWNFSVAFLGHFITGAYLGYLYMCNRRMTDTILAHSFYNASILFLQILFG
                     LVQIGG"
     gene            7806..8081
                     /locus_tag="U1041_001208"
     CDS             7806..8081
                     /locus_tag="U1041_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768320.1"
                     /translation="MRKFFQDLNQEYLETRSSVGEDRLEWLIQRKMTWGMRWGLVGIL
                     MFVLQPLTFHPHFLLGCFYLGSFWGLVYILGQVFFATRSIIRNWKKK"
     gene            complement(8094..8753)
                     /locus_tag="U1041_001209"
     CDS             complement(8094..8753)
                     /locus_tag="U1041_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HEM4768321.1"
                     /translation="MTPNKEDYLKCIYELGQLDQKITNKLIAEKMAFSAPAVSEMLKK
                     MVAEELISKDTKAGYLLSQTALEMVASLYRKHRLIEVFLVEQLGYSPEEVHEEAEILE
                     HTVSDHFINRLDLLLEQPQTCPHGGSIPQAGQPLIERYQTRLSQLTETGNYQLVRIHD
                     FYQLLQYLEQHELAVGDLLTVTDFDHFAQTITIQYKDKELAVPTAIAQQLFIEKSNRP
                     A"
     gene            8879..9802
                     /locus_tag="U1041_001210"
     CDS             8879..9802
                     /locus_tag="U1041_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM4768322.1"
                     /translation="MKKILFSFALLLSLIGLGACRPSQTTEGSSKPRVAVTTSFLNDM
                     VYQLAGDEVERDLLIPAGEDPHLYVAKSSDLSKLQKADLVLYHGLHFEGKMVEALEKT
                     GVAVSKNFNAKDLNTMDEDGEEIVDPHFWFSIPLYKSAVAVASEELQKLLPAKAEMIQ
                     KNAEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTD
                     SEVANSDMIETVNLIIDHNIKAIFTESTTNPERMEKLQEAVKAKGGQVEVVTGEGKEL
                     FSDSLAPEGEEGDTFIDMYKHNVKLMVKYLK"
     gene            10344..11114
                     /locus_tag="U1041_001211"
     CDS             10344..11114
                     /locus_tag="U1041_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM4768323.1"
                     /translation="MSAIIELKDVNLAYSASQTMALEDVNLVIPRGSRTAIVGPNGAG
                     KSSLFKVILGLEKTDTGQVRLLGQEAGLERLIAQKVAYIPQSSQVNWQFPATVFEIIL
                     MGRFAHSKGMFRRPTKADRQIVEQALERLKIADLRNRQIDQLSGGQRQRVFLARALAQ
                     EAELYLMDEPLAGIDQATEIMIMDMLKEFQCEGKTSIVIHHDLTTLDAYFDHLVWLHK
                     HVIDSGPLDETLTSENYQATYGIGNGLFLGNAKGGSHV"
     gene            11107..11967
                     /locus_tag="U1041_001212"
     CDS             11107..11967
                     /locus_tag="U1041_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM4768324.1"
                     /translation="MFEVFKEYSFWTVALGTVSLAVAASTIGSISVLTKQSLLGDALG
                     HASYPGVIVSFMIFQSRHPLYLLLGAVLSGYLSYALVHWLRRKGGHSLVNALSLVSAS
                     FFGLGMVLKNAIQGNEAFAGASQAGLQTYLFGQAAFIQLDDVILIGIISLLALVLFAF
                     FYQDYKLYLFDQTFARVIGVRVKYLQQLTMFLMICLIAVGLKLVGAILMSSFLIAPAV
                     FGLMLGKSYHKSLLLAGIVAIGSAFVGTWISSSVSGLSTGPTIIVCLTGLTLSAFVYV
                     TYVRKENGRV"
     gene            11960..12799
                     /locus_tag="U1041_001213"
     CDS             11960..12799
                     /locus_tag="U1041_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM4768325.1"
                     /translation="MFEVLLILMVIASSCGLLGSILVVKNQSMLADALSHSVLLGIVL
                     GFFISHSLDSPLLIVGASLFGLLSVLAIDRLHSRKIAHDAATGLVFSFFFAVAVLLIS
                     LFARNVHLDVDLVLQGEVLFAPLHRMDVLAWSLPVSLVKSSLAWLVIVLFFVWAYHRL
                     QVYLFDSNHARLSGLRTSILEMVILILVSLTTVLAFEAIGSMTVIVFLVAPSMAALRW
                     VKSFWQLLLLGQGIAILTVVLGFLVANQLDLTMSGTCAVVSLLVVCSSIILKNTWSWS
                     PDK"
     gene            12856..14748
                     /locus_tag="U1041_001214"
     CDS             12856..14748
                     /locus_tag="U1041_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010922744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
                     /protein_id="HEM4768326.1"
                     /translation="MTRLQDDFYEYVNGEWAKTAVIPDDKPRTGGFSDLADEIEKLMI
                     DTTNAWLAGEDVPEDSVLQNFVAFHKQVADYETRDRLGAKPAQALIAEYKALNSFEEF
                     TSKLAEYELAGKPNLMPFGVAPDFMDATTNVLWADSLGIILPDTTYYEEGHEKGAELL
                     KTWRESQEALLPKFGFSDEEIAELLDKVLALDAIVAKYVLSNEEGSEYAKLYHPYKWE
                     EFAALVPNLPLTAFFEELLGQVPDKIIVPEERFWQVANEIYSPENWDLLKAGLVFAAT
                     RSYTSFLSDEIRILDGAYSRALSGTPQAQNREKAAYNLAQGFFSQALGLWYAGEKFSP
                     EAKADVEAKVAKMIEVYKSRLETADWLAQETRDKAIVKLNVIKPYIGYPETLPERYYK
                     KIIDPSKSLVENAIELNKIDIAHGWSKWNKPVDIKEWGMPAHMVNAYYNPQKNLIVFP
                     AAILQAPFYSLEQSSSANYGGIGAVIAHEISHAFDSNGASFDEHGSLNNWWTEEDYAA
                     FEARTQQVIDQFEGQDSYGAKINGKLTVSENIADLGGIAAALEAAKSEDDFSAEEFFT
                     NFARIWRMKARPEFMQMLASVDVHAPGHLRTNIQLPNFDEFHETFGVQEGDGMWRAKE
                     DRVIIW"
     gene            14851..17352
                     /locus_tag="U1041_001215"
     CDS             14851..17352
                     /locus_tag="U1041_001215"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEM4768327.1"
                     /translation="MSFYNHKEIEPKWQEFWAKNHTFKTGTDAAKPNFYALDMFPYPS
                     GAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPADFTA
                     ENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVE
                     ELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLNDLEDVDWPESIKD
                     MQRNWIGKSTGANVTFKIKDTDKDFTVFTTRPDTLFGATYAVLAPEHDLVDSITSPEQ
                     AEAVAAYKRQASLKSDLARTDLAKDKTGVWTGAYAINPVNNKEIPIWIADYVLASYGT
                     GAIMAVPAHDERDWEFAKQFGLDIIPVLEGGNVEEAPYTEDGAHINSDFLDGLNKEEA
                     IAKMVAWLEENGVGQEKISYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPENELPLV
                     LPKTSDIKPSGTGESPLANLTDWLEVVREDGVKGRRETNTMPQWAGSSWYYLRYIDPH
                     NDEKLADEELLKAWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFN
                     QGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQAPAKMSKSLKNVVNPDDV
                     VEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFLDRVYRLITTKEISSENSGALD
                     KVYNETVKTVTEHIEDLKFNTAIAQLMIFVNAANKEDQLYVDYAKGFVQLIAPFAPHL
                     AEELWQGLAATGQSISYVAWPTYDESKLVESEVEIVVQIKGKVKARLTVAKDLAPAEL
                     EKVALADEKVQAEIAGQTVVKVISVPNKLVNIVVK"
     gene            17617..18195
                     /locus_tag="U1041_001216"
     CDS             17617..18195
                     /locus_tag="U1041_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4768328.1"
                     /translation="MSYQMIKKQFKLGLFTALIGNLLWSGMVNVSADDTVISDSPTVS
                     ALTKKVEAAKKAAKAAAAAKAALATNMVSEVAVEYTANTYPAGQCTWGAKEMAPWVGN
                     YWGNGGDWAASAVALGYEVGTTPKVGAIAVWTDGGYGHVAYVTDVAANGHIQVKESNY
                     GGVYYPSNVRGFFDPTTTSEGTVSYIYPPAGV"
BASE COUNT         5307 a         3187 c         4101 g         5603 t
ORIGIN      
        1 caagtcaagt tggacattta tcttttgccg aaatatgcta taataatgat tataacttac
       61 aaaaaatgta ggagatttct atgcttaata tttttgtatt agaagatgat ttttttcagc
      121 agagtaggct agaaaatgct attaggcagt gtgttgaaga aacgtcagta agatataaat
      181 tcctagaagt ttttggtaaa ccaaatcagt tattggaatc aattgaggaa gcaggcaatc
      241 accaattttt ctttttagat attgaaataa aaggcgaaga aaagaaagga atggaaattg
      301 ctaaagaaat ccgtgctcgc gatccctatg cagtcattgt ctttgtaaca actcactcag
      361 aatttatgcc ggtaacgtat cgttatcggg tttctgcttt agattttata gataaaggcc
      421 tagaggatag tgactttcaa aaggcagtat cagatgtgtt ggtgcatgct tttgaaaata
      481 ttgatcatac tatagctgaa aattcttttg tatacaaaac tgaaactgct catattcaag
      541 tcccttttag tgatattctt tattttgaaa catcatcaac gattcataaa gtcattttaa
      601 aaacgaaaac aggtcagact gagttttatg ggaaagtatc ggatttagcg aaagctgacg
      661 aacgacttta ccaagcacat cgttcttgtg tagtgaatcc tttaaatata acgaagttgg
      721 acagagcaaa ccatattgcc tattttgaga acggagattc ttgttttgtt tctcgtttga
      781 agcagaagaa acttgcagat ttgttggaga ttgattgatg aatattttta tatctccatt
      841 ttatgacact gtattcttta ttgacatgct gattcgtttg atgattcttc aacaaattag
      901 cggtttattt ttaagtaaga agaaaaaatg ttttatagct tcttgcttaa cagtctgtca
      961 aataattctt tatgatattt acttattatt agaaccattt tcttttctga ttgttatacc
     1021 attttttaaa acaaattgga atagaactca aaaaatattt tatggattat taccatttgt
     1081 gataggggat atgtttcaac gtatcatcag cctttattta cgttttattt ttgatgtaga
     1141 tattgtatat gcaaatgcta gtgccatgtt cgaaatctta ttgtctattt tattaattcc
     1201 tttttattat ggatttttca agggattacg aatagaatca aaatatcttc aagttgatac
     1261 tttggacaaa aaatttagag gtatattttt gggattaaat attctattta ttacttattt
     1321 tcttttaata agaggtaatt tatttttgga agtattgatg gataaaggaa tagtggatat
     1381 taagatagat acatatttta tcagaactaa tatactacta ttatacttta ttctatttac
     1441 agttagtatg ttgtatttaa actatcagaa gaaagaaaag caagaaaaag aaatccagga
     1501 gttgaaggac aaacaattaa ctgacttagg tcgttatagc cgtcatgttg aatcacttta
     1561 taaagaaatt cgaagtttcc gacatgatta tacaaatatt ctcattagtt tgaatgaggc
     1621 gattaaggaa gaggatattg ttgcgattcg aacgatttat agtgaggtta ttgcagattc
     1681 tgatagaaaa ttctatgatg gaaagtacga tatagctaga ttatccaata tacaaaatcc
     1741 tgccgtgaag agtctgctgt catctaagat gttggaggca caaaaaaagg ggattacaat
     1801 ttctgtggaa gtagatgttg aaattgaaca acctgcttta gagttgatag aattcataac
     1861 tattctatct atcttattag ataatgcgat tgatgctgca aagcagtgtg caaatggaaa
     1921 tattgtattt gcctatttcc aggaagatga cagaaaaatt gtggttgtag aaaatactac
     1981 ggttgaagat aaggtgtcaa caaatcatat ttttgaatat ggtcattcta caaaaggaga
     2041 taatcgagga attggcttgg ccaatgtaaa agctatttta gatagctatc ctaaattttc
     2101 tatatcaacg aacagtaata atcatagatt tgttcaggag ttggtgttta tagaataaga
     2161 tttatagatg taagtccagt cgaaaggctg gatttttttg attttctcga aaaaatggtc
     2221 attcattaca aaatatcgac agttcatgac atggatgaaa aaatggtggt gtgttggtct
     2281 atactaagag tgtaaagaaa acaaaaggag atacgaacat gaatacttta aaaacatact
     2341 tcaaaggaaa taaaaaaaca atctacatgg tgttgattat tgttggctta ttgaccattt
     2401 atccgcctat ttttcaaacc atttaccaag caggtagaga ttttgggcgt agttttgtga
     2461 atgcagtttt accgtaaaga tgttgatagg ataggaaatt ttaaaggaga gaaagcgatg
     2521 aaaaaaatga aaactgttaa ggatagtcaa ccgtggtcag agcgtgaaaa agttttgctc
     2581 ttgttacttt tggttagtgt gattgatatt ccgtctctca ttgataccct atatcaaatt
     2641 ggttatgaat ttggtcaggc tcttgcactt tggttttagt aaatgatgag atgattttac
     2701 ggaatgtgtt tgttggtgca ttttatacgc gtatcgtaag aggaataatt ttatgatttg
     2761 gcttattaaa cttctattgg ttgttgtaat ttccattcct gtaacaagta ttttacagcc
     2821 ttttcaaaat cattacttaa atggagtaac ggttggggtc atttccgtca ttgtgtccca
     2881 tttagtggat aaatatggga aaggtgggga tgaagtatga gtaaagagct gaaaaggatg
     2941 ttgaaactcg ggacactttt ccttgcctta tttatcttta atatgttttt tcttaaatgg
     3001 ttgtctgtta taggatttgt tattcatttt agcgaaatta gttatttggt tccaccgctg
     3061 ttttcagtca tcgttctatc aatgattgaa aaaaagagaa gtatgaaaac gacttaaaaa
     3121 aaaatggtca ttcattacaa aatatcgaca tttcatgaca tggatgaaaa aatcgggctg
     3181 atttggctta tactaaaggt gtaaaaaaca aaaaggagac acgagcatga atattttaaa
     3241 aacaattgtt aaacaccgtc atttccgctc cctacttgta ggactcggag caggagctat
     3301 catttgtcta tggggagtgt attatggaat gatttaccta ttcagttacc ttgtcattag
     3361 aggggtgatt tatatgttta aaaaataaga ataaggagaa acgagatgac agtaaaaaag
     3421 aaaattgcta tgacagaaga acaattgcta catgtcgcga tgattgtcta taccttgtat
     3481 gtgctgtact tactcgtcac taagaatttt acatctcgct tcataactcc ctatggactg
     3541 tatctattta ttctcgttga agaaaaatta gaaaaattta tcaaaaaact atatcacaac
     3601 ttaatgaatc aataaaaaat ggtcattcat tacaaaataa cgaccgttca tgacatggct
     3661 gaaaaaatgg agctgatttg gcttatacta agagtgtaaa gaaaacaaga acaggagaaa
     3721 caaagatgaa agaaaaaaag gaacttgtta ttacagggaa acatgtatta cacacaacaa
     3781 tgattgtcta tacattcttt attggatttg cattcattag acaggatctt gagttgccga
     3841 tgttgatacc atacggattc tatctactta cccttattct tgaaaaaatg gaaaaaagtg
     3901 gtaaatcgtt atttgaaatc agaattgaac gttaaggaaa atgatagtga ggagaactga
     3961 agatgaaaaa aatcaataaa gctataatgg tggagataac ttgtactata ctctttattt
     4021 tatatggttt agctaccata ctatctgata taggagtaat cccattttca gaaccgattc
     4081 cacttacaat tgtaatctgc atatatttag gtattttggg aaatattgaa acaaatagac
     4141 tcaactctga aaatgataaa aatggtcatt caaaataaaa cgaaaacaag gagaaatgaa
     4201 aatggaaaac aaacatcaaa tgatgactat caaagaaaga ataaaattat gcagttcttg
     4261 caagggcttg ttgaaggaat tttggtcact gccgttctta ttcacctagt ggcttggctt
     4321 gttcttggaa aaacagtaga tgttttctca tctaatttct atccaatgct ctttattgca
     4381 ttgtattttc taatgaaagt gaataagact aaaaaggagg actagcttat gaaacgtatt
     4441 aaaaatattt taaaatttat tggtttaatt cttgtcatca ttgcgattaa cataactccg
     4501 atgcgattga ttgccataca ggattcgatg tcaggtgcca tgcagtgggt ttctggcatt
     4561 ggctatctgg tcattgcgac agctatggtg gtgtggactt ggaaacggta taagaaaggt
     4621 ctacctgatc agcaaaaacg gttcacattt acttggaaag attttgggtt tgctctgcta
     4681 tttttcttgg ccggacgggt tgtcggtatt ggcgggacgt tattgaccca gttggtaact
     4741 ggtaatgcca ccacagccaa cgatgcagca cttttggcta caaatgagca attggcgaag
     4801 atgtttccgc tatactttat tgcctttcat attgcaatag gcgtttttgc tccttttatg
     4861 gaagagctcg tttttagagg tttgtttagc agatatttct tcaaagaaaa tcaaaaatgg
     4921 ctaaaattga taatcagttc agctgtcttt gctcttcttc atgcgattca tccaattgaa
     4981 ttgccacttt acttcttgct gggggcagtc ttctatttgg cttatgctcg ccgtggcaat
     5041 attgtggatg cgattcttgt tcatatcttg aacaatagct tgatggttat cttctcaatt
     5101 attggttact tattggtact gtttggttag tgatgttaaa ggagttcagt tatgacaatg
     5161 atggaaaaat tagataaaaa ataccaagaa tttgaaacag cttatgagtc ttccccgttt
     5221 gcaatgaaat tcttggtctg ggtaggagta gctctgacct tgatgacact tggatcagtt
     5281 cttgtaccag cgatttattc agcagggcaa gatttcggtg ccttcctata ttctgttttt
     5341 ggatgagaga gtggtagaaa ataaaatgaa aaaagctgag caatcagctt tttgtttaca
     5401 ctcgtttcga tagacttgtt gaaggtgggg gagttgctcg ttatttgagg gtttgcttga
     5461 atagattgtc taggttgttt aggtagtctg tccttgctcc tctaatgcga aggatatcta
     5521 cacgagagtc acgaatcaaa tagaagatga gatgctgttt tccaggaatc atccgtgttt
     5581 ttccttctgg gaataatgct cgtcccagac gagcatcgag gtcaatatat ccctctggaa
     5641 atatttctaa ggtcaagata gctgtgctca gagatgcaag cacctttcga gcacttgatt
     5701 ctgaaaattc acggacataa tactggtaga tctcctctaa atcttgctcg gctttagcag
     5761 ataaatgtac ttcatagacc atatttggcg aatacctcac gagcaggtgt tgtgtgtcct
     5821 gataaaactt cttggtagcc ttcatcaagc tctgcaatca actcatctag aaaagcctct
     5881 gcacgcacct cttctaccgt ttttattggc aaatcttgct cttcaaccac tctttctaca
     5941 aataaattaa gagcatcaga aagggtcata tctttttctg ataagattat ttttgcttgt
     6001 tccaataatt gtgcatttac tctaaaatta tattgtctat ccctaaccaa tcctgccatt
     6061 gtcttcaact ccaaattcta atatgtataa caatagtgta gctatttgtt ttacatctgt
     6121 caagcgataa tctggcactg aatatcttgg ataagattcg gtgacttcga aaaaatggtc
     6181 attcattaca aaatagcgac cgttcgtgac agggatgaga aaattagggt gagttaggtt
     6241 atactaaaat aggaaaaaac aattgtgtag cagtaatata cactggaggt attatattat
     6301 gaaggaaaat aattcaagga aaaaacaatt gatattcttt cgattttggg ctggtcaact
     6361 tcccctaatt gttttatttg ttctctatat gatgagagag gtcatatctc ttcaaatctt
     6421 atggtgtgtg acaattggaa tgtgtatgtc tacttctttc gtcatcaatc attatttcat
     6481 gaaagaagta agaaagcagg gagaacatac agtgtgggag cctactttgt acttgcaaca
     6541 gttaggtttc atagtcttat tttcaatcat aggactagta agtttgtata gaggtttgac
     6601 tgcagaatat ttctaccaga aaataatcgg ttatatcgga ttcatcatag caattacctt
     6661 tttaatcttg ctatgttggg gaattcgtac tatgaaagat tggaaaaaga ataagtaata
     6721 cttgcaatga catctagtaa aaacagttta ataacagtga caggagggat aaatggttga
     6781 tttttttagc ttccattttg cagtgaattt atgaatagta agttattatt ttttgcttta
     6841 tttttgatga atatttccat agttgtctat tattacctcg aaagtaaggt gctttctgta
     6901 aaagactgga ttattattgg cacttggttg attattttga gtcaaatcaa taaaaatgct
     6961 aaataaatgg agtgtcgttt gacaagacat tagaaacaag atagaatatc tgaagaaagt
     7021 atgggataag aatatgaaaa taataaaatc agtcggttta gcagtgggta ccttgctgct
     7081 cactttgctc attcaatttc cagtttatgt ggggataaca gcctttcaag agaatatgct
     7141 tttaaaactt gcagtcatga taggacttgg tcttgcaata ttggcactac tttctgttat
     7201 cagacgagga atggtgaaga atcaagtctt ttcaagagag aagctgaata tttttaaaat
     7261 agtcggaatg acagcactgg tatttgcggg acaaacttgc ctgaacctcc tttggcagta
     7321 tttgggtctt agccttagtg attctaacgc cttggatata gtcaatcagt taaattcgga
     7381 caatttttgg gtgatggctc tctcagttgt cttgtttgct ccagttttag aagaatttct
     7441 ttacagagga attttgttag aaaagacagc ccagtatttt cctaagtatc ctcaaatggt
     7501 catcgtattt tctgcccttc tatttgctta ttgtcatacc tggaactttt cagtggcatt
     7561 tttaggtcac tttatcacag gggcttatct gggttatctg tatatgtgca atagacgaat
     7621 gacggatact atccttgcac atagcttcta taatgcctcc attttattcc tccaaatttt
     7681 atttggtttg gtgcagattg gtggataaaa attgacagta gacattttgg ggaaatgcct
     7741 gtatactaag aggaaaccag caattttata attgctaact atcaagtgca gaggtgggca
     7801 gaaatatgag aaaatttttt caagacctta atcaagagta tctggaaacc agaagttcag
     7861 ttggagaaga taggctggaa tggttgattc agagaaaaat gacctggggg atgcggtggg
     7921 ggttggtagg gattctcatg tttgtcctgc aacctctaac ctttcatcca cactttctct
     7981 tgggctgttt ttatctaggt tctttttggg gtttggtata tatcctaggg caagtgtttt
     8041 ttgcaaccag atctattatc cgtaattgga agaaaaaata atcgctcagc ttattaggct
     8101 gggcgattgc ttttttcgat gaataattgt tgagcgatgg ctgttgggac ggcgagctct
     8161 ttgtccttgt actggatggt gatggtttgg gcaaagtggt cgaagtctgt gacggttagt
     8221 aaatcgccga cagctaattc atgttgttcc aagtactgaa ggagttgata gaagtcatgg
     8281 atacggacaa gctggtagtt ccctgtctca gttagctgtg acagccgtgt ctggtagcgt
     8341 tcgatgagcg gttgtcctgc ttgaggaatg cttcccccgt gaggacaagt ttgaggctgt
     8401 tccagtagca ggtctaggcg attgataaag tgatctgaaa cggtgtgttc taaaatctca
     8461 gcctcttcat gtacttcttc tggagagtag ccaagttgct caactaagaa tacttcaatc
     8521 aagcggtgtt tgcgatagag gctggctacc atttcaaggg cagtttggct gaggagataa
     8581 cctgccttgg tatccttaga aatgagctct tcggctacca tttttttgag catttcggaa
     8641 acggctggtg cggagaaggc catcttctct gcgatgagtt tattggtaat tttttggtct
     8701 aattgaccca gttcataaat acattttagg taatcttctt tgtttggtgt catgagaact
     8761 cgctttctac tgagactatt atatcaaaaa atttaaaaat cagttgacaa aatgaatttt
     8821 ttagcttaat ctaattatat agttaggtat gcttaataaa aataaaagga gaacctatat
     8881 gaagaaaata ttgttcagtt ttgctctgct attgtcccta atagggctag gagcttgtcg
     8941 tccatcgcaa accacagaag gctctagtaa gccaagagtg gctgtgacta cttccttcct
     9001 caatgacatg gtctatcagt tggcgggtga tgaggtggaa cgtgatttgc tgattccagc
     9061 aggagaagac cctcatttgt acgtagccaa atctagtgat ttatcaaaat tacaaaaggc
     9121 tgacctcgtt ctctaccacg gtttgcactt tgaaggtaaa atggttgaag ctttggagaa
     9181 gaccggagta gctgtttcta aaaactttaa tgcaaaagac ttgaatacga tggatgagga
     9241 tggggaagag attgtcgatc cgcacttctg gttttcaatt cccttataca agtcagctgt
     9301 agctgtagct tcagaggaac tacaaaaact cttacctgct aaagctgaga tgattcagaa
     9361 aaatgcagaa aaataccaag cgcagctaga tgatttgcat gcctgggtag aaaaagaatt
     9421 aagtgtgatt ccaaaagaaa gtcgctattt ggtaacacca catgatgcct ttaattactt
     9481 tgctgctagt tatgacttca ctctttatgc tcctcaaggc gtgagcaccg actcagaagt
     9541 ggctaatagt gacatgattg agacagttaa cctaatcatt gaccataata tcaaggctat
     9601 ctttacagag tctacaacta atccagaacg catggagaaa ttgcaagagg cagtaaaagc
     9661 caaaggcggt caggttgaag ttgttactgg cgaaggtaag gagttgttct cagattcttt
     9721 ggcaccagaa ggtgaggaag gggatacctt tatcgacatg tacaaacata atgttaaatt
     9781 gatggttaaa tatctgaaat agtacaggtc gaacgggctt gctattcaat gaagactaga
     9841 gatattaccg aagatatagt tgaaaggtac cgatatgagg gacaatcaat tgtttggagc
     9901 acaagcagta taggactctt tctattggag gtggcaacgc tttggggagg ataggcgtta
     9961 gtagcaaatc acaccagtta ttgaggtcct tggctagaaa tactgtttgt agacctcgat
    10021 gatcttggtt cacagcatca gtagtctgtg cgtgaatagg gatttcaaat gagtagtaaa
    10081 aaggactcgg tctaggtcga gttctttccg tttttggacc gtttttaaca gaattataaa
    10141 cctacaattg aaagaagcat tggtgctcta cgaaaatcaa attcatgtac tgatgtgttg
    10201 aaataagcga tgtatagagt ttgccagcaa tttgttggta cggtatctta atcttatcga
    10261 ctttctcagc ttggtaggtt ggtctgattt tgactttcat tgagtatgaa tgaggtatat
    10321 cgttttttaa aataggagga aatatgtcag caatcattga attaaaagat gtcaatttag
    10381 catattcagc cagccagacc atggctttag aagatgtcaa tttggtgatt cccagaggga
    10441 gtcggacagc tattgttgga ccaaatggtg ctgggaagtc cagtctattc aaggtcattt
    10501 tggggttgga aaaaactgac acaggacagg ttcgcttgct tggtcaggag gcaggtctag
    10561 agaggttgat tgctcaaaaa gtagcctata ttccccagtc cagtcaagta aactggcaat
    10621 ttcctgcaac agtttttgaa attattctga tgggacgctt cgctcatagt aaggggatgt
    10681 ttagaagacc gactaaggct gatagacaga ttgttgagca ggctctagaa cggttaaaaa
    10741 ttgcggattt acgcaatcgt cagattgatc agctttcagg tgggcagcgt cagcgggtct
    10801 ttctagccag agccctggca caggaagcag aattgtatct tatggatgag cctctggcag
    10861 ggattgatca ggcaacagaa atcatgatca tggatatgct caaggagttc caatgtgaag
    10921 ggaaaacttc cattgtcatt catcatgact taacgacgct ggatgcctac tttgatcacc
    10981 ttgtctggct tcataagcat gtgattgact ctggtccgct ggatgagact ttgacaagcg
    11041 agaattatca ggcgacctac ggcataggaa atgggctgtt tctaggaaat gccaaaggag
    11101 gcagtcatgt ttgaggtttt caaagagtat tctttctgga cagttgcttt agggaccgtc
    11161 agcctagctg tggcagccag cactatcgga agtatatctg ttcttactaa acagagtttg
    11221 cttggggatg ctcttgggca tgcttcttat cctggagtga ttgtctcttt catgattttt
    11281 cagtcgcgac atcctctcta cttgctgtta ggagcagtgt tgtcaggcta cctttcttat
    11341 gcacttgtcc attggctgcg tcgaaaaggt ggtcacagcc tagtcaatgc cctttcattg
    11401 gtgtctgcgt ctttctttgg tttgggaatg gtcttaaaaa atgctattca gggaaatgaa
    11461 gcctttgcag gggcttccca ggctggattg caaacctatc tatttggaca ggcagccttt
    11521 attcagctgg atgatgtgat actcatcgga attatttcac tattggcttt ggtattgttt
    11581 gctttctttt atcaagacta taagctatat ctgtttgatc aaacttttgc aagggttatt
    11641 ggtgttcgtg taaagtactt gcagcagttg acgatgtttt tgatgatttg cctaattgca
    11701 gtaggattaa agttagtcgg agctattttg atgagtagtt ttttgattgc accagctgtc
    11761 tttggcttga tgctgggaaa atcgtatcac aagagtctgt tactggcagg aatcgttgca
    11821 attgggtcgg ctttcgtagg gacctggatt agctccagtg tatctggttt gtcgactgga
    11881 ccgactatta tcgtctgtct gacaggtctg accctgtctg catttgtgta tgttacctat
    11941 gtcagaaagg agaatggtcg tgtttgaagt attactcatt ttgatggtta ttgctagttc
    12001 ttgtggcttg ctcggctcga tactggttgt aaaaaatcaa tcgatgttgg cagacgcgct
    12061 atcgcattct gtcttgcttg ggattgttct gggatttttt attagtcata gtttggattc
    12121 accgttgcta atagttggtg ccagtctgtt tgggttatta tcggttcttg ccattgaccg
    12181 tctgcatagt cgaaagatag cgcatgatgc cgcaacaggt ctagtttttt ctttcttttt
    12241 tgcggtggcg gttttgctta tttctctttt tgctcgcaat gttcatttgg atgtggatct
    12301 ggttttgcag ggggaagtac tttttgctcc gctccatcgt atggatgttc tagcctggtc
    12361 actccctgtt agtctggtca agtcgagttt ggcttggttg gttattgttc tattttttgt
    12421 ttgggcttac catcgtttac aagtgtacct atttgacagc aatcatgctc gtttgtctgg
    12481 cttacgaaca agtattttag aaatggttat tttgattcta gtttccttaa ctactgttct
    12541 ggccttcgaa gcgattggct cgatgactgt tattgttttc ttggtggcac caagtatggc
    12601 tgccctacgt tgggtcaaat ccttctggca attgcttctt ttagggcaag gtatcgctat
    12661 tttaacggtt gtgctaggtt ttttagtggc caatcaactg gatttaacca tgtcagggac
    12721 ctgtgccgtt gtcagccttc ttgtggtttg ttcgagtatt attctaaaaa atacttggtc
    12781 atggtcacct gataagtgaa attgtcagaa ttttttgtta ttatagtcat taagaaagac
    12841 aaaggagaaa aatcaatgac acgtttacaa gatgattttt acgaatacgt caatggtgaa
    12901 tgggcaaaaa cagccgtgat tccagacgat aagccaagaa caggtggttt ctcagacctg
    12961 gcggacgaga ttgaaaagct catgattgac acgacaaacg cttggttggc gggagaagat
    13021 gtcccagaag atagcgtttt gcaaaacttt gtggcttttc acaaacaagt agctgactat
    13081 gaaacccgtg accgtttggg ggcaaaacca gcacaagcct tgattgcaga gtacaaggca
    13141 ctcaactctt tcgaagaatt caccagcaag ctggcagaat atgagttggc aggcaagcca
    13201 aacctcatgc ctttcggcgt agcgcctgac tttatggacg cgaccaccaa tgtcctctgg
    13261 gcagattctc taggcattat cctgccagat acgacctact atgaggaagg gcatgaaaaa
    13321 ggagcagaat tgctcaaaac gtggagagag agccaagaag cactcttgcc taagtttggt
    13381 ttcagcgatg aagaaattgc agagctcttg gataaggtct tggccttgga tgcaattgta
    13441 gctaaatatg ttctgtcaaa cgaagagggg tcagagtatg ccaagctcta tcatccatac
    13501 aaatgggaag aatttgcggc cttggtacca aacctgcctt tgacagcttt ctttgaggaa
    13561 ctgttaggac aggtgcctga taagattatc gttccagagg agcgtttctg gcaggtggct
    13621 aatgagattt acagtcctga aaactgggac ttgctcaagg ctggtttggt atttgcggcg
    13681 actcgttcct atacctcttt cctatcagac gagattcgga ttttggacgg agcttattct
    13741 cgtgcccttt ctggtacgcc gcaggctcag aatagggaaa aggcagccta caaccttgct
    13801 caaggtttct ttagtcaggc cttggggctc tggtatgctg gagagaaatt ctcaccagaa
    13861 gccaaggccg atgtggaagc aaaagttgcc aagatgattg aggtctacaa atctcgtttg
    13921 gaaacggcag actggttggc tcaggaaacg cgtgataagg ctattgtcaa actcaatgtg
    13981 attaagcctt atatcggcta tccagaaacc ttgccagagc gttattataa gaagattatt
    14041 gacccaagca agtccttggt ggaaaatgct atcgaactaa acaagattga cattgctcat
    14101 ggttggagca agtggaacaa gcctgtggac attaaggagt ggggcatgcc agctcacatg
    14161 gtcaatgcct actacaatcc acagaagaac ttgattgtct ttccagcagc cattttgcag
    14221 gcgccatttt actctctgga gcagtcttca tcagctaact acggcggtat cggtgcggtt
    14281 attgcccacg agatttccca tgcctttgac tcaaacggtg cttcctttga tgagcatggt
    14341 agcctaaata actggtggac agaagaagat tatgcagcct ttgaagcccg tacccagcag
    14401 gtcatcgacc agtttgaggg tcaggattct tacggtgcca aaatcaatgg taagttgact
    14461 gtgtcagaaa acattgccga ccttggtggg attgcagcag ccctagaagc agccaagtca
    14521 gaagatgact tctccgcaga agagttcttc actaactttg ctcgtatctg gcgaatgaag
    14581 gcccgtcctg agttcatgca gatgttggca agtgtagatg ttcatgcacc aggtcaccta
    14641 cgcaccaaca tccagttgcc aaacttcgat gaattccatg aaacatttgg cgttcaagaa
    14701 ggcgacggca tgtggcgtgc aaaagaagac cgcgtgatta tttggtaaaa acgggaaaac
    14761 agctagtgaa aactggctgt ttttgtcttt cccaattccc taaaaacgtg atataatagt
    14821 aaagataatt tattgacatg gagaaatgat atgagcttct acaatcacaa ggaaatcgag
    14881 cctaaatggc aggaattttg ggcgaaaaac cacaccttta agacgggaac agatgcggct
    14941 aagccaaact tttatgccct agatatgttc ccttatccgt ctggtgcggg cttgcacgtt
    15001 ggtcaccccg agggctatac tgcgaccgac attctcagcc gttacaagcg tgctcagggc
    15061 tacaacgttc ttcacccaat gggttgggat gcctttggtc tgccagctga gcaatacgct
    15121 atggatacag gcaatgaccc agctgacttt acagcggaaa acattgccaa cttcaagcgt
    15181 cagattaacg cccttggttt ttcttacgac tgggaccgcg aggtcaatac gacagacccc
    15241 aactactaca agtggactca gtggattttc accaagttgt atgaaaaagg cctggcctat
    15301 gaggcagaag tacctgtaaa ctgggtagag gaattaggaa cagctatcgc caacgaagag
    15361 gtccttcctg acggaacgtc tgaacgtggt ggctaccccg ttgtccgcaa gccaatgcgt
    15421 caatggatgc tgaaaatcac tgcctatgca gagcgtttgc tcaatgactt ggaagatgtt
    15481 gattggccag agtctatcaa ggacatgcaa cgcaactgga ttggcaagtc aaccggtgcc
    15541 aatgtgacct tcaagattaa ggacacagac aaggacttca cagtctttac aactcgtcct
    15601 gacacccttt tcggtgcgac ctacgcagtt cttgcccctg agcacgactt ggtggatagt
    15661 atcacctcac cagagcaggc agaagcggta gcagcataca aacgccaagc ctctctcaaa
    15721 tcagacttgg ctcgtactga cctggctaaa gacaagacag gtgtttggac tggtgcctac
    15781 gctatcaacc ctgttaataa caaagaaatt ccaatctgga ttgcggacta tgtgctggca
    15841 agctacggaa caggtgctat catggccgtt cctgcccatg atgagcgtga ctgggaattt
    15901 gccaagcagt ttggtttgga catcattcca gttctggaag gtggcaatgt agaagaagca
    15961 ccttatacag aagacggtgc ccatatcaac tccgacttcc tagatggtct taacaaggaa
    16021 gaagctattg ccaaaatggt ggcttggctg gaagaaaatg gtgtcggtca ggagaaaatt
    16081 tcttaccgac tccgtgactg gctcttcagc cgccagcgtt actggggtga gccaattcca
    16141 atcatccact gggaagatgg aacttctaca gccgtaccag aaaatgagtt acctctggta
    16201 ttgccaaaaa cctcagacat caaaccttca ggtacagggg agtcaccgct tgctaacctg
    16261 acagactggt tggaagtggt gcgtgaagac ggtgtcaaag gtcgccgtga gaccaacact
    16321 atgccacaat gggcgggttc tagctggtac tacctccgct atatcgaccc acacaacgat
    16381 gagaaattgg cagacgagga gctcctcaaa gcttggttgc cagtggacat ctacatcggt
    16441 ggtgccgagc acgcagtcct tcacctgctc tacgcccgct tctggcacaa gttcctttac
    16501 gacctcggtg ttgtgccgac taaagagcca ttccaaaaac tctttaacca gggcatgatt
    16561 ttgggaacta gctaccgcga cagccgtggt gcccttgtag cgacagataa agttgaaaaa
    16621 cgtgatggtt ctttcttcaa catcgaaact ggtgaagagt tggagcaggc acctgctaag
    16681 atgtctaagt cccttaaaaa cgtggtcaac ccagacgatg tggtcgagca gtttggtgcg
    16741 gataccctcc gtgtttacga gatgttcatg ggcccacttg atgcgtcaat cgcttggtca
    16801 gaagaaggcc ttgaaggtag ccgtaagttc cttgaccgtg tttaccgcct gattacaacg
    16861 aaggaaattt cttcggaaaa tagcggagcg cttgataaag tctacaatga aactgtgaag
    16921 acggtgacag agcatattga agacctgaaa ttcaatacgg ctatcgccca gctcatgatt
    16981 tttgtcaacg cagccaacaa ggaagatcag ctctatgttg actacgccaa aggctttgtc
    17041 cagttgattg ctccattcgc tccacacttg gcagaagaac tctggcaggg tctggcagca
    17101 acaggccagt caatcagcta tgtcgcatgg ccaacatatg acgaaagcaa gctagtagaa
    17161 agcgaagtgg aaatcgttgt ccaaattaag ggtaaagtaa aagctcgctt gactgtagcc
    17221 aaagatctag caccagctga acttgaaaaa gttgcccttg cggacgaaaa agtccaagct
    17281 gaaatcgctg gtcaaacagt ggtgaaggtg attagtgttc cgaataaact agttaatatt
    17341 gttgtgaaat aaccaattta tttgctcatt tccaacctcc aacagttcac tgaactgttg
    17401 gagccaacta aacttgttaa tattgtagtg aaataaatgt aaataataag aaaacgactt
    17461 ccgtattgga ggtcgttttt ttgacaaaaa gtccgaacac tgtgattgtt aagagattgc
    17521 aagttatctg taatatttgt tacatttctt taagctctct gcaaggatta tcccttagga
    17581 tagatagggc agaaaaacac gaaggaatca aatattatga gttatcaaat gataaaaaaa
    17641 caattcaaat tgggactgtt tacagccctc ataggaaatc ttttatggtc gggaatggtg
    17701 aatgtcagtg cagatgacac agttataagc gatagtccga cagtatcagc gttaacaaaa
    17761 aaggttgaag ctgcaaaaaa agcagccaaa gctgctgccg ctgcaaaggc tgctttggct
    17821 accaatatgg tgtcagaggt tgctgtggaa tatacggcta atacctatcc agcgggtcag
    17881 tgtacttggg gtgccaaaga aatggctcct tgggttggaa actattgggg taatggtgga
    17941 gattgggcag ctagtgcggt agcgcttgga tatgaagtgg gaactactcc aaaagttggc
    18001 gctattgctg tatggacaga tggaggctac ggtcatgttg cctatgtaac agatgtggca
    18061 gctaacggtc acattcaagt taaggaatca aactatggtg gagtatacta cccaagtaat
    18121 gtccgaggtt tctttgatcc aacaacgact agcgaaggaa cagtcagcta tatttaccca
    18181 ccagctggag tataatta
//
LOCUS       DASFQS010000044        17921 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.044, whole genome shotgun sequence.
ACCESSION   DASFQS010000044 DASFQS010000000
VERSION     DASFQS010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17921
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.044"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            188..961
                     /gene="sufC"
                     /locus_tag="U1041_001217"
     CDS             188..961
                     /gene="sufC"
                     /locus_tag="U1041_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEM4768329.1"
                     /translation="MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKST
                     LSAAIMGNPSYEVTQGEVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLR
                     AAMNAGKEDEDKISVRDFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLL
                     MLEPTFALLDEIDSGLDIDALKVVSKGINAMRGEGFGAMIITHYQRLLNYITPDVVHV
                     MMEGRVVLSGGPELAQRLEKEGYVQVAAELGIDYKEDDI"
     gene            978..2240
                     /gene="sufD"
                     /locus_tag="U1041_001218"
     CDS             978..2240
                     /gene="sufD"
                     /locus_tag="U1041_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013989976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEM4768330.1"
                     /translation="MTKEKIQEFSALQAEPTWLTDLRLKAFDKIAELDLPVIERVKFH
                     RWNLGDGSLATNDEIGAVPDFTAIGDNPMLVQVGSQTVLEQLPVDLVEKGVVFTDFAS
                     AMDIIPDVLEKYLGSAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEALFYQDS
                     TSPVAFNKRVLIIAGKNTKLNYLERFESLGDGAAATSANIVVEVIALAGSQVKFAAID
                     RLGKHLDTYLNRRGYLGNDATIDWAIGLLNEGNVIADLDSELKGNGSHANLKVVGLSS
                     GRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGADAQQESRVL
                     MLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAERLVVRGF
                     LGAVITEIPVKEVRDQLIAVIEEKLTKR"
     gene            2244..3467
                     /locus_tag="U1041_001219"
     CDS             2244..3467
                     /locus_tag="U1041_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM4768331.1"
                     /translation="MDLERIRKDFSILDQVVNDEPLVYLDNAATTQKPQQVLDVLADY
                     YQKDNANVHRGVHTLSERATARYEAARQKVADFIQAKSSKEILFTRGTTTSLNWVAQF
                     AKEILQPDQEVIISVQEHHSNIIPWQQACQQTGAKLCYVTLKDGELDMDHLRSLLSSK
                     TKFVSLAHVSNVLGSVAPIGKIAELVHQVGAYLVVDGAQSVPHMAVNVQELDVDFYAF
                     SGHKMLGPTGIGVLYGKEELLNRMSPVEFGGEMIDFVYEQTATWKELPWKFEAGTPNI
                     AGAIGLGAAVDYLMEIGMDAIQAHEAELVDYVFPKLQAIPGLTIYGSQDLSKRTGVIA
                     FNLDDLHPHDVATALDYEGVALRAGHHCAQPLLRYLQVPATVRASFYIYNTKADCDKL
                     VEAIIKTKEFFNGPI"
     gene            3454..3894
                     /locus_tag="U1041_001220"
     CDS             3454..3894
                     /locus_tag="U1041_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEM4768332.1"
                     /translation="MALSRLDSLYMAVVSEHSKSPRHRGSLDGVEKLELHNPTCGDVI
                     ELSVKFENGLVSDIAFDGVGCTISTASASMMTEAVLGKEISQIQELAELFSQMVQGQE
                     DTRQKELGDASLLAGVAKFPQRIKCATLPWNALKKALERSESAD"
     gene            4032..5447
                     /gene="sufB"
                     /locus_tag="U1041_001221"
     CDS             4032..5447
                     /gene="sufB"
                     /locus_tag="U1041_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016397186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEM4768333.1"
                     /translation="MSEERIEPTPIDLGEYKFGFHDENVELVASTGKGLNEEVIREMS
                     RIKGEPEWMLEFRLKSYETFKKMPMQTWGADLSELDFDDIVYYQKPSDKPARSWDDVP
                     DKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKHGIIFTDTDTALKEHP
                     ELFKKYFGKLVPPSDNKLAALNSAVWSGGTFIYVPKGVKLDIPLQTYFRINNEGTGQF
                     ERTLIIVDEGASVHYVEGCTAPTYSTASLHAAIVEIIAHEGAYMRYTTIQNWSDNVYN
                     LVTKRARAEKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTMLSIAFANKGQVQDTG
                     AKMIHNAPRTSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIECDTIIMDDISKS
                     DTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKEL
                     PMEYAVELNRLIAYEMEGSVG"
     gene            complement(5963..7204)
                     /locus_tag="U1041_001222"
     CDS             complement(5963..7204)
                     /locus_tag="U1041_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEM4768334.1"
                     /translation="MRKFLLTLTTVIALFFTSTPILAEDFSVAAKHAIAVEVSSGKIL
                     YEQDAETKASIASISKTLSIYLVYEALAKGEITLDTMVDISDYPYSLTSNTELSNVNL
                     DERSYSVRDLLNASLITSSNSAIIALAEKIAGSEAAFVDRMKAKVQEWGITDAKIVNV
                     SGLDNTDLGENIYPGSSPEDVNMFSALDVAIIARRLILDYPQVLNITSLNAYDFGGYT
                     YYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFLATTQQAGMRIITVVLNATDGLTSP
                     ENRFVATNDLMNYVYSNFSLVTLVRKGEAFEDSKIKVFNGEKETSPVVAAADLTVVQR
                     NQSDNVPTATFTTDIKEIDAPLKAGTLVGKLQLKDQDLIGKGYISEQASVDMIIPSDM
                     KEASWPFSWWNQFVRYVNEKL"
     gene            7419..9209
                     /locus_tag="U1041_001223"
     CDS             7419..9209
                     /locus_tag="U1041_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4768335.1"
                     /translation="MKKTTKLFALAGVTLLSASVLAACGSKQSGAAKQELSFPSEVKQ
                     DGTAVADAQLKYAFVSATTSSGLLIDELTENTTDSTFGGMVDISMFGYDGDRKLDDSG
                     LAKAEFDVKGKKITVSLTGKDYKWSDGEPFTINDYIFTIKSMASKDYTGVRFDDRFLN
                     IVGMEEYVAGTASDISGIKKVDDYTVELTVKEMSPSMMYAGGDVPAYIQPEHIYKDIP
                     VADWEKSEYSRTSKLVGMGPWKIKEIVNGESITYVPNEYFFKGTTPKTSSLKIDIVSP
                     DTIVSEMKAGNYDIADMPVDQLDSYKDASNLNIVGSLDSAYEYISFNFGKYDESAKKN
                     VMDENAKMNDVKLRQAIAYAIDTKTAGESLYNGLYHPANSLIISFFGDIHDSELEGYS
                     YDPEKAKKLLEEAGYKDVDGDGIREGKDGKEFKITFAARKRTEANEALVQQYIAWWKE
                     VGLNVELYTGRTVEGKSFYNSVQANDAAIDMYAGGWSTGYDPNPTGLWGPIAAFNMSR
                     FVSDENTKLLNAISSTESFDDKKNVENYKAWQKYAHEQAFAIPTFESESITALNKRVK
                     NYDSNYGSASGKGIALENIELTADKGVVAE"
     gene            9585..10583
                     /locus_tag="U1041_001224"
     CDS             9585..10583
                     /locus_tag="U1041_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768336.1"
                     /translation="MATEKPLLDIKDLHVGFRIGDDYFDAVDGVDISLQKNEILAIVG
                     ESGCGKSTLATTIMGLHNPLNTKITGSIQYNDIELIGMDEAKYNTVRGNDIGMIFQDP
                     LASLNPLMTIGAQIDEALFYHTDLDTNARTERVLELLAQVGIPNPKRTFKQYPHELSG
                     GMRQRIIIAMALSCKPPIIIADEPTTALDVTIQAQILDLLNDIQSETGSGIILITHDL
                     GVVAETADRVAVMYGGQFVEVAPVEELFTNPKHPYTRSLLKSNPQSGSEGGDLHVIEG
                     IVPPITKMVRKGCRFAPRIPWIGAEAHEENPSMHEVGQNHFVRCTCHETFYFEGEA"
     gene            10586..11527
                     /locus_tag="U1041_001225"
     CDS             10586..11527
                     /locus_tag="U1041_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768337.1"
                     /translation="MGFIEVKDLKVHYPIRSGFFNRVTDHVYAVDGVNIEFEEGKTYG
                     LVGESGSGKSTIGKAIIGLERATSGQIIYEGQDVTNKSRGKKGNFNRDVQMIFQDSLS
                     SFNPKKRILDIIAEPIRNFDRLSPDEEKKKVLQLLDTIGLNEEALIKYPHEFSGGQRQ
                     RIGVARALASNPRLIIADEPVSALDLSVQAQVLNYMKRIQDEFKLSYLFISHDLGVVQ
                     HMCDELFIMYRGRFVETGNKNDIYNNPQHIYTKRLLSAIPTIDPLNRLKNKEKRLAAE
                     KEYQEMQGQYYDENGRVYDLRSFSETHQVALPEGGQN"
     gene            11529..12485
                     /locus_tag="U1041_001226"
     CDS             11529..12485
                     /locus_tag="U1041_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010750774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768338.1"
                     /translation="MWKTVLRRLLMMIPQIIILSVIAFFVAKMMPGDPFTGLIDPNID
                     PAIIEQKRIAAGYYDPIPVQYFRWVGNLLQGDFGQSVIFKQPVVDVIMQRLNNTIWLS
                     LLTMVLTYLIALPLGMIAGRYQNSLADKIIGVYNFLTFSTPTFVFAILMLWMFGFSLG
                     WFPTRGSIDGGVEGFAAILSRLHHMILPAITMAILSTTVTIQYLRTGIIDAKSQDYVR
                     TARAKGVPERVVYNRHIFRNSILPIASFLGYELTGLIGGSIFIENIFTYPGIGQLFYN
                     SISSRDYSVILALLLIFGMGTLLGTLISDIIMSIVDPRIRVK"
     gene            12499..13401
                     /locus_tag="U1041_001227"
     CDS             12499..13401
                     /locus_tag="U1041_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768339.1"
                     /translation="MSKENKKQVQSASTPPGGFRVIAREFMKDRLALTSLIILVTVLL
                     AVFIGALLLDQEQVMKVNLLGRYLEPGVNGYILGTDEGGKDIFGQLIIGARNSIIIGF
                     TITIITSIVGISIGLISGYYGGRLDGFLMRIVDFIMILPVTMLIIVFVTVIKNYTIYH
                     FILIMSAFYWTAKARLFRTRTLSEASLDYVNASKTLGTSDFMIMFREILPNLSSLIIV
                     NLTLNFAGNIGIETSLTYLGFGLPSTVPSLGTLIANARNADILENKTWIWLPAAIFIL
                     VMMLCINYVGQAFQRAADAKQRLG"
     gene            13522..13887
                     /locus_tag="U1041_001228"
     CDS             13522..13887
                     /locus_tag="U1041_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018365170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM4768340.1"
                     /translation="MTVKINTKDGQIELTDDVIATVVGGATTEIFGVVGMASKSAIKD
                     NFQALLRKENYSKGVVIKTLEDGRIAVDVYTVMSYGVKISEVSRNIQERVKFNLENQL
                     GISVDAVNVFIQNIKVVGE"
     gene            13890..15554
                     /locus_tag="U1041_001229"
     CDS             13890..15554
                     /locus_tag="U1041_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004193336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HEM4768341.1"
                     /translation="MSKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNM
                     GMTITNGAKEVADKSASTVGEVAQILSKGLLMGARGNSGVITSQLFRGFGQSVKGKVE
                     LDGKDLAQAFQHGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATL
                     DGANRALKKTPEMLPVLKEVGVVDSGGQGLVYIYEGFLSALTGEYIASEDFEATPAVM
                     SEMINAEHHKSVAGHVATEDITFGYCTEIMVALRQGPTYVKDFEYEEFRNYLNDLGDS
                     LLVVNDDEIVKVHVHTEDPGLVMQAGLQYGSLVKVKVDNMREQHEAQVEKEESFQKPA
                     EQKEYAIIAVAAGEGLTEIFKSQGVDYVISGGQTMNPSTEDFVNAIELVNARNVILLP
                     NNKNILMAAQTAAEVAEVAVKVVETKTLPQGFTSLLAFDPSRDLESNFEAMTASLAEV
                     KSGSVTTAVRDTTIDGLEIHENDNLGMVDGKIVVSNPDMMETLVATFEKMLDEDSEIV
                     TIYIGEDGNEELAQTLAEQLEEQFEDVEVEIHQGNQPVYPYLFSVE"
     gene            15619..16095
                     /gene="tsaE"
                     /locus_tag="U1041_001230"
     CDS             15619..16095
                     /gene="tsaE"
                     /locus_tag="U1041_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEM4768342.1"
                     /translation="MTNYWGYGIIKDMYSQNENELIAIGERIGKACKPNQVLVLSGDL
                     GAGKTTLTKGLAKGLKIEQMIKSPTYTIVREYEGTMPLYHLDVYRIGDDPDSIDLDDF
                     LYGGGLTVIEWGELLDVSLFDDYLLVRIEKEEDGRRLTFEAHGPTSLVLAEEIQNV"
     gene            16088..16615
                     /locus_tag="U1041_001231"
     CDS             16088..16615
                     /locus_tag="U1041_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768343.1"
                     /translation="MSKKEIYFSEAEPADAAAFIDFMNQVARETDYLVMDETGFRFSV
                     DEMETIFEAGIENPRELCLLAKVGSEVVGAISVKSSKQFRISHIGNIFIAVKKAYWGH
                     GLGTILLEEVLHWAEEMDVLKRLELTVQVRNQAAVHLYQKLGFNIEGTQIRGARTDKG
                     EWLDLYYMGKLIGEV"
     gene            16612..17805
                     /locus_tag="U1041_001232"
     CDS             16612..17805
                     /locus_tag="U1041_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM4768344.1"
                     /translation="MTIGKKIFLMSLAIVGLTLGAGLIYGASLLNFSTGTISKTYKQL
                     DGEEEITPIDATEPLTILLMGVDMDQATRGGDWEGGRSDSMILVTVNPKTKETNMMSL
                     TRDIMVEIAEANGESSGTVEKLNHSYSYGQAPMAIATIEKMMDITIDRYIEINMDGLV
                     ELVDAVGGIEVNNTLGFPISISEHEPAYTSIVQPGKQLVNGDQALVYARMRYDDPEGD
                     IGRQRRQREVITAIIKKLLQLDGLTQYKKILTAISNNMRTNIEISPATIPSLLGYKDS
                     VSKLNSYQLRGVDQMVDEIYYQLPTSEHLLEMQNILKKSIGLEENTGLVTNVKVYEGQ
                     MGLPSPINVYDVYTNLLLLEASPWAESLDPEIGSPSATTTVTTEEQVTDFSTEPVLGD
                     ENGSQ"
BASE COUNT         5241 a         3451 c         4137 g         5092 t
ORIGIN      
        1 gggagtgaaa cagtctggga atagactgtt tcagctcaac aacttaaaac taggacttgt
       61 tgacgaactc ttctatggat ggtcgagttc tttccccact gccaaagttg agtcttatcg
      121 gtgtatctag ttagcttggt cagttaatgt ggtttttgaa gaggacaaaa atgaaaagga
      181 gcacagcatg tcagtattag aaatcaaaga ccttcatgtg gaaatcgaag gcaaagaaat
      241 cctaaaaggc gttaatttga cccttaaaac aggtgaaatt gcagccatca tgggaccgaa
      301 cggaacaggg aaatccaccc tttcagcagc catcatgggc aatccaagtt acgaagtgac
      361 ccaaggggaa gttctcttcg atggtgttaa tattttagaa ttagaagtcg atgaacgtgc
      421 ccgtatggga ctcttcttgg cgatgcaata cccgtcagaa atcccaggaa tcaccaatgc
      481 ggaatttctt cgtgctgcta tgaacgctgg taaggaagat gaagacaaaa tctcagtccg
      541 cgacttcatt actaaactgg atgaaaaaat ggaactcctc aacatgaaag aggaaatggc
      601 agagcgctac ctcaacgaag gtttctcagg tggtgagaaa aaacgcaatg agattctgca
      661 attactcatg ttggaaccaa cttttgccct tcttgatgag attgactcag gtttggatat
      721 tgatgccctc aaagtcgtgt caaaggggat caatgctatg cgtggtgaag gctttggtgc
      781 tatgattatc actcactacc aacgcttgct caactacatc acgcctgatg tagtccatgt
      841 catgatggaa ggccgtgtcg tgctttcagg cggaccagaa ttggcacaac gcttggaaaa
      901 agaaggatat gtccaagttg cagctgagct tggcatcgac tacaaagaag atgacattta
      961 agtctttgga ggaagctatg accaaagaaa aaattcaaga attttcagcc ttgcaggcag
     1021 aaccaacttg gttgactgac ctgcgtctta aggcttttga caaaatagca gagctggact
     1081 tgccagttat cgagcgggtc aagtttcacc gctggaattt aggtgacgga agcctagcaa
     1141 caaatgatga aatcggggct gttccagatt ttacagccat cggtgacaat cctatgttgg
     1201 tacaggttgg tagccaaact gttttagagc agttgccagt tgaccttgta gagaagggtg
     1261 tagtctttac agacttcgca tcggctatgg acatcattcc agatgtgctt gaaaagtacc
     1321 tcggatctgc cgtagcctac gacgagcaca aattagcagc ttacaacaca gcctatttca
     1381 acgcaacagc tgtcctctac gtaccagaca atgttgaaat cgaccagcca gttgaggccc
     1441 ttttctacca agacagcact agtccagttg cctttaacaa acgtgttctc atcatcgcag
     1501 gaaaaaatac caagcttaat tatctagaac gctttgaaag tctgggtgat ggagcagcag
     1561 cgacttcagc caatattgtt gtagaagtaa tcgcccttgc tggcagccaa gtcaagtttg
     1621 cggctattga ccgccttggt aagcatttgg atacctacct caaccgtcgc ggctatcttg
     1681 gaaatgatgc aacgattgac tgggcgattg gtctgctcaa cgaaggaaat gtcattgcgg
     1741 acttagacag cgaattgaaa ggaaacggta gccatgccaa ccttaaggtt gttggactat
     1801 cttccggtcg tcaggtacaa ggtgtggata cgcgcgtgac caactacggt cataattcgg
     1861 tcggtcacat cctgcaacat ggggtaatct tagaaagtgg aaccttgact tttaatggta
     1921 tcggacacat tgttcgtggt gctaaaggtg cggatgccca gcaggaaagc cgtgtcctca
     1981 tgctgtctga caaggctcgc tccgatgcta acccaattct ccttatcgat gagaacgagg
     2041 tcacagctgg acacgcagct tcaatcggtc aggtggatcc agaagacatg tactacctta
     2101 tgagtcgtgg cctggaccga gcaacagctg aacgcttggt tgttcgcggt ttccttggtg
     2161 cagtcattac cgaaattcct gttaaggaag ttcgtgacca actgattgcc gtgattgaag
     2221 aaaaactaac aaagagataa gatatggatt tggaacgcat tcgcaaggat ttttcaatcc
     2281 tagaccaagt tgttaacgat gagccgctgg tctatttgga caatgcggcg accactcaaa
     2341 aaccgcagca ggtgctagat gtgctggcgg attattacca gaaggacaat gccaatgtcc
     2401 accgtggcgt tcacaccctt tcggaacggg caactgctcg ctacgaggcg gctaggcaga
     2461 aggtggcaga ttttatccag gccaagtcta gcaaggaaat cctcttcacc agaggaacga
     2521 ccaccagtct caactgggta gctcagtttg caaaggaaat tctccagcca gaccaggaag
     2581 tgattatctc ggtgcaagag caccactcca atatcatccc ttggcagcaa gcctgtcagc
     2641 aaacaggtgc caagctctgc tatgtgaccc taaaagacgg cgagctagac atggatcacc
     2701 tgcggtcgct actgtcttct aagaccaagt tcgtctccct agcacacgta tccaatgtcc
     2761 taggcagcgt ggctcctatc ggaaaaatag cagagctggt gcatcaagtc ggtgcctact
     2821 tggtggtgga cggagcccag tcagttcccc acatggccgt caacgtgcaa gaattagacg
     2881 tggatttcta tgccttttca ggtcataaaa tgttgggacc gacaggaatt ggcgttctct
     2941 acggcaagga agaattactc aatcgcatgt cgccagttga attcggtggc gagatgattg
     3001 acttcgtcta tgagcagaca gccacttgga aggaattgcc ttggaagttt gaggcaggaa
     3061 cgcccaatat tgcaggtgcc attggtctgg gagcggcggt tgattacctg atggaaatcg
     3121 gcatggacgc tatccaggcc cacgaggcag aattggttga ctacgtcttt cctaaattac
     3181 aggctattcc aggcttgacc atttatggca gtcaggacct gtccaagcgg acgggagtta
     3241 ttgcctttaa cttggacgat ttacatccac acgatgtggc gaccgccttg gactacgaag
     3301 gtgttgcttt gcgggctggc caccattgtg cccaaccgct tctcagatat ttgcaggtgc
     3361 ctgctactgt acgagcaagt ttttacatct acaataccaa ggctgactgt gataagttgg
     3421 tcgaggcaat catcaagaca aaggagtttt tcaatggccc tatctaggtt agattctctt
     3481 tatatggcag ttgtgtctga acactccaag tcgcctcgtc accgcgggag cttggacgga
     3541 gtggaaaagt tggaactcca caacccgacc tgtggcgatg tgattgaact atccgtcaag
     3601 tttgaaaatg gcttggtatc tgacattgcc tttgatggcg ttggttgcac catttcaacc
     3661 gcatcggctt ctatgatgac tgaagcagtg cttggcaaag aaatcagtca gattcaagaa
     3721 ctagcagaac tcttctcaca aatggtccaa ggccaagaag acacacgcca gaaggaactg
     3781 ggagatgcct cacttctcgc aggtgtcgcc aaattccccc aacgcatcaa gtgtgctact
     3841 ttaccgtgga atgccctaaa gaaagcactg gaacgaagtg agagtgctga ctgagcacca
     3901 tcgaataaac aaaaaatgaa aatcatacag aaaggattgt tcagtttctg attggaattg
     3961 aacaggccca ggaagctttg aagaaagcgt aactgctatt ttcatacttt ttgggcttag
     4021 tatcttatat tatgtcagaa gaaagaattg aaccaacccc gattgatctt ggggaataca
     4081 aattcggttt ccatgacgag aacgtggaac tagtggcttc aactggtaag ggcttgaacg
     4141 aagaagtgat tcgtgaaatg tcccgtatca aaggcgagcc tgaatggatg ttggaattcc
     4201 gtttaaaatc ctacgaaacc ttcaagaaaa tgccgatgca gacttgggga gccgacttgt
     4261 ctgaactgga ttttgacgat attgtttact atcaaaaacc gtcggataag ccagcacgca
     4321 gctgggatga tgtgccagac aaaatcaagg aaacatttga acgcatcggt atcccagaag
     4381 ctgagcgtgc ttacctggca ggagcttctg cccagtacga atcagaagtg gtctaccata
     4441 acatgaagga agagtacgac aagcacggta ttatctttac agatactgac acggctctca
     4501 aggaacaccc agagctcttc aaaaaatact ttggaaaact cgttccgccg tcagataata
     4561 aactagctgc cctcaactca gcggtttggt caggtggtac cttcatctat gtaccaaaag
     4621 gcgttaaatt ggatattcca ctccaaacct atttccgtat caacaacgaa ggaacaggtc
     4681 agtttgaacg caccctcatc atcgtagatg aaggggcaag tgttcactac gtagaaggtt
     4741 gtactgctcc gacttactcg acggctagcc tccacgctgc tattgtggaa atcattgccc
     4801 acgagggtgc ctacatgcgt tacacgacca ttcaaaactg gtcagacaac gtttataact
     4861 tggtaaccaa gcgtgctcgt gctgagaaaa atgctacagt tgagtggatt gacggaaacc
     4921 ttggtgccaa aacgaccatg aaataccctg cggtttactt ggaaggcgaa ggagcacgcg
     4981 gaaccatgtt gtccattgcc tttgccaaca agggtcaggt tcaagatacc ggtgccaaga
     5041 tgatccacaa tgcaccgcgg acttcatctt ctatcgtatc caaatccatt gctcgtggcg
     5101 gtggagaagt caactaccgt ggtcaagtca cttttgctaa aaactcagcc aagtctatca
     5161 gccacatcga gtgtgacact attatcatgg atgatatttc caaatcagat accattccat
     5221 ttaatgaaat ccataactca caagtggccc tcgaacacga agccaaagta tcaaaaatct
     5281 cagaagaaca gctctattac ctcatgagcc gtggcctatc cgaatccgaa gccacagaga
     5341 tgattgtcat gggctttgtc gaaccattca caaaagaact cccaatggaa tacgcagtcg
     5401 aactcaacag actgattgcc tatgaaatgg aggggtcggt tggttagatt tttggcaatt
     5461 tagcaaacat gagtttgcta aaagccaaaa aatctccaac cgacgttgga aatagagagc
     5521 gacggcagtc gctcttcttt gtaaatttag caaactagtc tgggagacta gattacccta
     5581 ctgacgtcgc ttccttacag gaagcgatat gtagtgagga gttccgcagg aactctcacc
     5641 aactcaatct ccaaccgacg ttggaaatag ggagcgacgg cagtcgctct tctttgtaat
     5701 catataaaaa ttctatacct tccacgctcg ttgttttctg taagaaaacg atatgtagct
     5761 aggagtttcg tagaaactct ctccaaccga ggttgagctt tttgcccagc ctcttctttg
     5821 taattcagat aaccttgtga ctcaaatagc tttaaagcta ttcaaacctg tcaaactcgc
     5881 cactgaagta ggatataagg agtagcggat gtcactctgc tataaaaaat agtatgtcga
     5941 aaatcgttcg acatactatt ttttataatt tttcattaac atagcggaca aattgattcc
     6001 accaagagaa tggccaggat gcttctttca tatcgctagg gataatcata tcgacactag
     6061 cttgctcgga aatataacct tttccaatga gatcttgatc tttcagttgc agtttgccaa
     6121 ccagggtccc tgctttgagg ggagcatcaa tttcttttat atccgttgtg aaagttgcgg
     6181 tggggacatt atcagattga tttcgttgaa caacagttaa atctgctgcc gcaacaacag
     6241 gacttgtttc tttttcacca ttgaaaacct ttatcttgct atcttcaaaa gcttcacctt
     6301 ttcttactag cgtaacaagc gaaaagttag aataaacata gttcatcaaa tcatttgttg
     6361 cgacaaatcg attttctgga gaggtcagcc catcagtggc attcaatact actgtgataa
     6421 tgcgcatacc agcttgttga gttgttgcaa gaaaacttga acctgctgag tttgaggtcc
     6481 ctgtttttaa gccgtcaacc cctccacgag cgtgagtacc atcgcttagc atttggttgg
     6541 tgctatagta agtgtagcca ccaaaatcgt aggcgtttag tgaggtaatg ttgagtacct
     6601 gaggatagtc gagtattaat cgtcttgcaa tgatagcaac gtctagggct gagaacatat
     6661 ttacatcttc aggactggaa cctggataaa tattttcacc caagtcggta ttgtctagtc
     6721 cagatacatt gacaatcttt gcgtcggtaa ttccccattc ttggactttt gctttcattc
     6781 gatctacgaa tgcagcttcg ctaccggcta ttttttctgc cagagcaata atagcactat
     6841 tggatgatgt tattaaagaa gcgtttaata ggtctcttac tgaataggaa cgttcatcta
     6901 ggttgacgtt gcttaattct gtattagaag tgaggctata gggataatca gaaatatcta
     6961 ccatagtatc taaagtgatt tcaccctttg ccagtgcttc gtagaccagg taaatgctca
     7021 atgtcttact gatagaagca atgcttgctt tggtttcggc atcttgctca tacaagattt
     7081 tgccgctact tacttcaact gcgatagcat gcttggctgc aacagaaaaa tcttctgcca
     7141 aaataggtgt ggaagtgaaa aaaagagcaa taactgtagt gagtgttagt aaaaatttac
     7201 gcataatcat tcctttggct gttattttat tctattatat cacaagaaat gtgagaaaaa
     7261 tttggaaaaa atatgtaaaa aataagaaaa tgctgaaaaa ttatgttttt acaaaatttt
     7321 ctgacaaaaa agactttatt taagaaaatt ttatgatata attattttta taagacatag
     7381 taataagtgt caaagaaaaa gaaaaacaga ggtgttttat gaaaaagaca acgaaacttt
     7441 ttgcacttgc aggtgtgact ctcctttcag catctgttct tgcagcatgt ggttcaaaac
     7501 aatcaggtgc agcaaaacag gaattgtcat tcccatctga agtaaaacaa gatggaacag
     7561 cagtcgcaga tgctcaattg aaatatgcat ttgtttcagc tacaacttca tcaggtctct
     7621 tgattgacga gttgactgaa aatacaactg actcaacatt tggtggaatg gttgatattt
     7681 caatgtttgg ttacgatgga gatcgtaagt tagatgattc tggtcttgct aaagctgaat
     7741 ttgatgtaaa aggtaagaaa atcactgtta gtttgacagg taaagattac aagtggtcag
     7801 atggtgagcc atttacaatc aatgactaca tctttactat caagtcaatg gcaagcaaag
     7861 actatacagg tgttcgtttt gatgatagat tcttgaacat tgtgggtatg gaagagtatg
     7921 ttgcaggaac agcatcagac atctctggta ttaagaaagt tgacgactac acagtagaat
     7981 tgactgtaaa agaaatgtcg ccttcaatga tgtatgcggg tggtgatgtc ccagcttata
     8041 tccaaccaga acatatctat aaagatatcc ctgttgcaga ctgggaaaag agcgagtact
     8101 cacgtacatc taaacttgtt ggtatgggac cttggaaaat caaggaaatc gtaaacggtg
     8161 agtctatcac ttacgtacca aacgaatact tcttcaaagg tacaacgcca aaaacaagct
     8221 cattgaagat tgacatcgta tctccagata ctattgtttc tgaaatgaaa gctggtaact
     8281 atgacatcgc agatatgcct gttgaccagt tggattcata caaggatgct tctaacttga
     8341 atatcgttgg ttctttggac tcagcttatg aatacatttc atttaatttt ggtaaatatg
     8401 acgagtctgc taagaaaaac gtcatggatg aaaatgctaa gatgaatgat gtgaaacttc
     8461 gtcaagcaat tgcctatgcg attgatacta agacagctgg tgagtcattg tacaatggtc
     8521 tttaccaccc tgcaaactca ttgattatct cattcttcgg cgacattcat gattcagagt
     8581 tggaaggcta ttcatacgat cctgaaaaag cgaaaaaact cttggaagaa gctggctaca
     8641 aagacgtaga tggcgatggt atccgtgaag gtaaagatgg taaagagttc aagattacct
     8701 ttgcagctcg taaacgtacg gaagcaaacg aagcacttgt acaacaatac attgcttggt
     8761 ggaaagaagt tggcttgaac gttgaacttt acacaggacg tacagttgaa ggtaagtcgt
     8821 tctataactc agttcaggct aatgatgctg ctattgatat gtatgctggt ggatggtcaa
     8881 caggttacga tccaaaccca acaggacttt ggggtccaat cgcagccttc aacatgtcac
     8941 gtttcgtgtc tgatgaaaat actaagttgt tgaatgcaat cagctcaaca gaatcatttg
     9001 acgataagaa aaatgttgag aactataagg cttggcaaaa atatgctcac gagcaagcat
     9061 ttgctattcc aacatttgaa tctgagtcaa tcacagccct taacaaacgt gtgaaaaact
     9121 atgattctaa ctatggttca gcttcaggta aaggtatcgc tcttgaaaat atcgaactta
     9181 cagctgataa aggtgtagta gcagaatagt ctgcaagaag acaatagaat ttgaaaaagc
     9241 caacttggtt ggcttttttc agattgctat tggaattttc tgataattat ggtatagtag
     9301 actcagtaca caaaaaatga gtcactacta acaaaaactc aagatggatc acattaacct
     9361 actcaatttc taattgagac agtaataggg atggtcttga tttatgattg gatatagtac
     9421 attttttact tctgggtaac cgctatcaaa cgataattga tagaaatatg ttattctaga
     9481 gtagttatat aaagtcagtt aatcaaacat tatatgaact tgataatcgt aaggatattg
     9541 aattgattga gcttgattag ctggcacata aaggaggaaa aagcgtggct accgaaaaac
     9601 cgcttttaga cattaaagat ttacacgtcg gtttccgtat tggagatgat tattttgacg
     9661 ctgttgacgg tgttgacatc tcattgcaaa aaaatgaaat tttggcaatt gtaggggaat
     9721 ctggttgtgg taaatcaact ttggcaacga ccattatggg cttgcataac cctttgaata
     9781 ccaaaatcac aggaagtatc cagtacaatg atattgaatt gattggtatg gatgaagcca
     9841 agtacaatac ggtacgtggt aatgatattg gtatgatttt ccaagatcct ttggcttctt
     9901 tgaatccatt gatgacgatt ggtgcacaga ttgatgaggc gctgttctat cacactgatt
     9961 tggataccaa tgctcgtaca gagcgagttt tggaactctt ggctcaggta ggtattccaa
    10021 atcctaagcg gacatttaaa cagtatccac atgagctttc aggtggtatg cgtcagcgta
    10081 tcattattgc gatggccttg tcttgtaaac cgccaattat tattgcggac gaacctacaa
    10141 cggccttgga tgttacaatt caagcacaaa tcttggatct cttaaatgat attcaatcgg
    10201 agacaggttc gggtattatt ttgattaccc atgacttggg agtagttgca gagactgctg
    10261 atcgtgtggc tgtcatgtac ggtggtcagt ttgtcgaagt agcgccagta gaagagctct
    10321 ttaccaatcc aaaacatcca tatacacgtt cgctcttgaa gtcaaatcct caatcaggta
    10381 gcgaaggagg cgatcttcat gttattgaag gtattgtgcc accgattaca aaaatggttc
    10441 gtaaaggttg ccgttttgct ccgcgtattc cgtggattgg agcagaggct catgaagaga
    10501 atccgagcat gcacgaggta ggtcaaaatc actttgttcg ttgtacctgc catgagacat
    10561 tctattttga aggggaggcc taatagtggg atttattgaa gtaaaagatt taaaagtcca
    10621 ttatccaatt cgtagtggct tctttaaccg tgtgacggat catgtctatg ctgtcgatgg
    10681 cgttaatatt gagtttgaag aaggaaaaac ctatggtttg gtaggtgagt caggttctgg
    10741 gaaatcaacc attggtaagg caattatcgg tttagagcgt gccacttctg gtcagattat
    10801 ctatgaagga caagatgtaa ccaacaaatc acgtggtaaa aaaggaaact ttaatcgtga
    10861 tgttcaaatg attttccaag attctctttc aagttttaac ccgaaaaaac gtattttgga
    10921 catcattgca gaaccaatcc gtaactttga ccgtttatct ccagatgaag aaaagaaaaa
    10981 agttcttcaa ctcttggata caatcggtct aaatgaagaa gctctgatta aatatcctca
    11041 cgaattctca ggtggtcaac gccaacgtat cggtgttgct cgtgctttgg ctagtaatcc
    11101 tcgtttgatt attgcagatg agccggtttc tgccttggat ttgtctgtgc aggcacaggt
    11161 cttgaattat atgaaacgta tccaagatga gtttaagctc agctatctct ttatttccca
    11221 tgacctcggt gttgtgcaac acatgtgtga tgaattgttc atcatgtatc gcggacgttt
    11281 cgtagaaaca ggaaataaga acgatattta taataatcca caacacattt atactaaacg
    11341 tttgttgtca gctattccaa cgattgaccc actcaatcga ttgaagaata aagaaaagcg
    11401 tttggctgct gaaaaagaat atcaagaaat gcaaggtcaa tactatgatg aaaacggtcg
    11461 tgtgtacgat ttgagatcct tctcagaaac tcatcaagta gcccttccag aaggaggtca
    11521 gaactaagat gtggaaaaca gtattacgtc gtttactcat gatgattccg cagattatta
    11581 ttttgagtgt cattgcgttc tttgttgcga agatgatgcc gggggatccc tttacaggat
    11641 tgattgaccc caatattgat ccagcaatca ttgaacaaaa acggattgcg gcaggttatt
    11701 atgacccaat ccctgttcag tatttccgtt gggtaggcaa tcttttgcaa ggagattttg
    11761 gtcagagtgt tatttttaaa caaccagttg ttgatgttat catgcaacgt ttaaacaaca
    11821 ctatttggtt gtctttattg acgatggtgt tgacttattt gattgccctt ccattgggga
    11881 tgattgcagg tcgttaccaa aactcgcttg cagataaaat cattggcgtg tataactttt
    11941 tgacattttc aactccaact ttcgtttttg ctatccttat gctttggatg tttggcttta
    12001 gtttgggatg gttcccaaca cgtgggtcga ttgacggtgg tgtagaagga tttgcagcta
    12061 ttctcagtcg cttacaccat atgattcttc cagcgattac aatggctatt ttgtcaacaa
    12121 cagtaacaat ccaatatctt cgtaccggta ttatcgatgc gaagagccag gactatgttc
    12181 gtacagcccg tgccaaaggt gttcctgaga gagttgttta taaccgtcat atcttccgga
    12241 attctatctt gccaattgca tctttcttgg gctatgaatt gacaggattg attggtggtt
    12301 ctatcttcat tgaaaatatt ttcacttatc caggtatcgg tcagttattc tataactcta
    12361 tttctagtcg tgactatagt gtcatcttgg ctttgttgtt gatatttggt atgggtacct
    12421 tgttggggac attgatttca gatattatca tgagtatcgt ggatccacgt atccgtgtga
    12481 aatagaagga ggagtaaggt gagtaaagaa aataaaaaac aagtacaatc tgcttcaact
    12541 cctccaggtg gcttccgtgt catcgcgcgg gagtttatga aggatcgact tgcattgacc
    12601 tcattaatta tcttagtgac ggttctcttg gcagttttta tcggagcgct tctgttggat
    12661 caagaacaag ttatgaaagt caaccttttg ggacgttact tggaaccagg tgttaatggc
    12721 tatatcttgg ggacagatga aggtggtaaa gatatctttg gtcagctgat tatcggtgct
    12781 cgtaactcga tcattatcgg ttttaccatt acgattatta ctagtattgt tggtatctct
    12841 atcggtctga tttctggtta ttacggtggt cgtttggacg gattcttgat gcgtattgtc
    12901 gatttcatca tgattttgcc ggtgactatg ttgatcattg tgttcgtgac agttatcaag
    12961 aactatacga tctatcactt cattctcatc atgagtgcct tttattggac ggccaaggct
    13021 cgtctattcc gtacaaggac tttgtcagag gcaagtttag attatgtcaa tgcatcaaaa
    13081 acattgggaa caagcgactt catgattatg ttccgtgaaa ttttaccaaa cttaagttca
    13141 ttgattatcg ttaacttgac cttgaacttt gcgggaaata tcggtattga gacttcgttg
    13201 acttatcttg gtttcggtct accatcgaca gtaccaagtt tgggtacctt gattgccaat
    13261 gcccgcaatg cagatatttt ggaaaacaag acatggattt ggttgccagc agctatcttc
    13321 atccttgtga tgatgctctg tatcaactat gtcggacaag ctttccaacg tgcagcagat
    13381 gctaagcagc gtttaggtta attgtgaaaa gggttccttt gggaactctt ttttgtaaaa
    13441 tccgatgtaa caagcttgtt ttttacagaa agcagaaaat gtggtaaaat ggagtgataa
    13501 aactatttga ggtaacgaat tatgactgtt aaaatcaata ctaaagacgg ccaaattgaa
    13561 ttgactgatg acgtgattgc cacagttgtt ggcggtgcta cgactgagat tttcggtgtt
    13621 gttgggatgg ctagtaagtc tgcgatcaag gataattttc aagcactttt gagaaaagaa
    13681 aattattcta aaggtgttgt gattaagacc ttggaagatg gtcgcattgc agtcgatgtt
    13741 tatactgtga tgagctacgg tgtaaaaatc agtgaagtat ctcgcaacat ccaagaacgc
    13801 gttaagttca acttggaaaa tcaactaggt atctctgtag atgccgtcaa tgtctttatc
    13861 caaaatatca aagtcgtagg agaataattg tgtctaaaat tacaactagt ttatttcaag
    13921 aaatggtgca agcagcatca actcgtctga ataaacaagc cgaatatgtg aactcactaa
    13981 atgttttccc tgttccagat ggggatactg gtaccaatat ggggatgact attactaatg
    14041 gtgctaaaga agtagcagat aagtctgctt ctactgttgg agaagttgcg caaattcttt
    14101 ctaagggctt gttgatggga gctcgtggaa actcaggtgt tattacgtcg caattgttcc
    14161 gtggttttgg tcaatctgtt aaaggcaagg ttgaattgga cggtaaggat ttggcgcaag
    14221 cctttcaaca tggtgtagaa gtggcttata aagccgttat gaagccagtt gaaggtacaa
    14281 ttcttactgt ttcgcgtggg gcagccactg ccgctttgaa aaaggcagaa gagactgatg
    14341 atgcggttga ggtcatgcgt gccactcttg acggtgctaa tcgtgctctt aagaaaacgc
    14401 cagagatgct tccagtattg aaggaagttg gtgttgtcga ttcaggtggt caaggtctgg
    14461 tctatatcta cgaaggcttc ttgtcagctt tgacaggcga gtacattgct tcggaagatt
    14521 ttgaggcgac acctgctgtt atgtctgaaa tgatcaatgc tgagcaccac aagtcagttg
    14581 caggtcatgt agcgacggaa gatattacct ttggttactg tacagaaatc atggtagctc
    14641 ttcgccaggg tcctacttat gtcaaggact ttgaatatga agaattccgt aactacctaa
    14701 acgaccttgg agattccctc ctagttgtca acgatgatga aatcgttaaa gtccacgtcc
    14761 atacagaaga tccaggcttg gtcatgcagg caggtcttca atacggtagc ttggtcaagg
    14821 taaaagtgga caatatgcgt gagcaacatg aagctcaggt tgagaaagaa gaaagtttcc
    14881 aaaaaccggc tgaacaaaaa gagtatgcta ttattgcggt agctgctggg gaaggtttga
    14941 cagaaatctt caaatcacaa ggtgttgact atgtgatttc aggtggtcag accatgaacc
    15001 catcaacaga agattttgtc aatgctattg aattggtcaa tgcccgcaat gtcatcttgt
    15061 tgccaaacaa caaaaatatc ttgatggctg ctcagacggc tgctgaggtt gcagaagttg
    15121 cggttaaggt tgtggaaact aagaccctac cacaaggttt tactagcttg cttgcttttg
    15181 atccaagtcg tgatttggaa agcaactttg aagcgatgac ggcatctctc gcagaggtga
    15241 aaagtggtag cgtgacaact gcagtccgcg atacaaccat tgacggtctt gaaatccatg
    15301 agaatgacaa ccttggtatg gttgatggca agattgtggt ttctaatcca gatatgatgg
    15361 aaacacttgt cgctacattt gagaaaatgc tcgatgaaga tagtgaaatc gtaacgatct
    15421 atatcggtga agatggtaat gaggaactcg ctcaaactct tgctgaacag ctagaagaac
    15481 aatttgaaga tgttgaggtc gaaatccatc aaggaaatca accggtctat ccatatcttt
    15541 ttagcgtaga ataaacaaaa tcgcaggcct aggcttgcga ttttttctgt cgacttgtct
    15601 acaatttcca gtagacctat gacaaactac tggggctatg gtataattaa agacatgtat
    15661 agtcagaatg aaaatgaatt gattgccatt ggcgagcgaa ttggaaaagc ctgtaagcca
    15721 aatcaagttc tagtattatc aggggatttg ggtgctggga aaacaactct gaccaagggt
    15781 ttggccaagg gtttaaaaat tgaacagatg attaagagtc ctacttatac gattgttcga
    15841 gagtatgagg ggaccatgcc actctatcac ttagatgttt atcgaattgg agatgaccct
    15901 gactcgattg atttggatga ttttctctat ggaggaggtc taacggttat cgagtgggga
    15961 gaattactgg atgtcagtct atttgatgac tatttgctcg ttcgtatcga gaaggaagaa
    16021 gacggtcgtc gtctgacatt tgaagctcat ggcccgacta gtctagtctt agcagaggaa
    16081 attcaaaatg tctaaaaagg aaatatattt tagcgaggct gaaccagctg atgcagcagc
    16141 ttttattgat tttatgaatc aagttgctag agaaacggat tatctggtca tggatgagac
    16201 tggttttcga tttagtgttg atgaaatgga gaccatcttc gaagcaggaa ttgaaaatcc
    16261 tcgtgaattg tgcctgttgg ctaaggttgg ttcggaagtc gtcggcgcaa tttctgttaa
    16321 gtcctctaag cagtttcgca ttagccatat cggaaatatt tttattgcag taaaaaaagc
    16381 ctactggggt cacggtctag ggacgatttt actggaggaa gtattgcatt gggcagagga
    16441 aatggatgta ttgaagcgtt tggaattaac ggttcaggtt cgcaatcagg cggcagtaca
    16501 tttataccaa aaactaggat tcaacattga aggaacccag atacgtgggg ctagaacaga
    16561 taaaggagaa tggcttgatc tttattatat gggcaagtta attggtgaag tatgacaatt
    16621 ggaaaaaaaa tattcttaat gtctttggct attgttggtt taacactagg tgccggctta
    16681 atatacgggg ccagcttgtt aaatttttct acaggtacta tttcaaaaac ctataagcag
    16741 ctagatggag aggaagaaat cactcctatt gatgcgacag agcccctaac catcctactg
    16801 atgggggtgg atatggacca agcgacccgc gggggagatt gggagggtgg ccgtagtgat
    16861 tcgatgattt tggtaactgt taatcccaag actaaggaaa ccaatatgat gagcttgact
    16921 cgtgatatta tggttgagat tgcagaagcg aacggggagt cttcaggaac ggttgaaaaa
    16981 ctaaatcatt cttatagcta cggacaggca ccgatggcca ttgccacgat cgaaaagatg
    17041 atggatatta ccattgaccg ctatatcgaa ataaatatgg atggtctggt tgagcttgtt
    17101 gatgcggttg gaggtattga ggtaaacaat actcttggct tccctatatc catttcggaa
    17161 catgagcctg cctacacctc tattgtccag ccggggaaac agttggtaaa tggggatcag
    17221 gcgctggttt atgctcggat gcgttatgat gatcctgagg gggatatcgg acgtcagaga
    17281 cgccaacgag aagttatcac ggctattata aaaaaactcc ttcagttaga tggtttgacc
    17341 cagtataaga agattctgac cgccatttcc aataatatgc gaaccaacat tgagattagt
    17401 cctgcgacaa ttccaagcct cctgggttat aaagactcgg tctctaagtt gaattcctat
    17461 cagttgcgcg gtgtggacca aatggttgat gaaatctatt atcaattacc aaccagtgaa
    17521 catctattgg aaatgcaaaa tattttgaaa aaatctatcg gcttagaaga aaataccggc
    17581 ttagtcacaa acgtgaaggt ctacgaagga cagatgggat tgccaagtcc aataaacgtt
    17641 tatgatgtat atacaaatct cttgttgtta gaagcaagtc catgggcaga aagcttggat
    17701 ccagaaatag ggagtccatc ggctactacg actgtgacaa cagaagagca ggtaaccgat
    17761 ttttcaacag agccagtact tggtgatgaa aacgggtcac aataatgtag tcattcagtt
    17821 tttcttttat tgtagtcatt tgaattaact ttgatacatc gtcactttcg gcttgccgta
    17881 ctctagtaca gcctgcacct cagttccttg tctgaaagct a
//
LOCUS       DASFQS010000045        17685 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.045, whole genome shotgun sequence.
ACCESSION   DASFQS010000045 DASFQS010000000
VERSION     DASFQS010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17685
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.045"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            100..570
                     /locus_tag="U1041_001233"
     CDS             100..570
                     /locus_tag="U1041_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4768345.1"
                     /translation="MKFEKVYDSVKGIVNKARKEFYIKLWDREDWDQEGMMTLFELLE
                     DQPWLVDEQEQLYCYFKVKFRNRIKDRVRRQESQKRKFDRMPHEDIHDLSHVIQSPGL
                     VNDELLMLRGALRDYRKKLSNDQLANYEKLISGQSFNGRRKMIRDLQIHLKDFR"
     gene            826..1134
                     /gene="rpsJ"
                     /locus_tag="U1041_001234"
     CDS             826..1134
                     /gene="rpsJ"
                     /locus_tag="U1041_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEM4768346.1"
                     /translation="MANKKIRIRLKAYEHRTLDTAAAKIVETATRTGAQVAGPVPLPT
                     ERSLYTIIRATHKYKDSREQFEMRTHKRLIDIINPTQKTVDALMKLDLPSGVNVEIKL
                     "
     gene            1349..1975
                     /gene="rplC"
                     /locus_tag="U1041_001235"
     CDS             1349..1975
                     /gene="rplC"
                     /locus_tag="U1041_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002986659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEM4768347.1"
                     /translation="MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETD
                     GYAAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNIEGLEVGQEITVETFAA
                     GDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLAG
                     RMGGNRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAVKAGK"
     gene            2000..2623
                     /gene="rplD"
                     /locus_tag="U1041_001236"
     CDS             2000..2623
                     /gene="rplD"
                     /locus_tag="U1041_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEM4768348.1"
                     /translation="MANVTLFDQTGKQAGEVVLNDAIFGIEPNQAVVFDVIISQRASL
                     RQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLP
                     QKVRRLALKSVYSEKVAENKFVAVNSLEFTAPKTAEFAKVLAALSIDSKVLVILEEGN
                     EFAALSARNIPGVKVATATTASVLDIANADKLLVTQAAISKIEEVLA"
     gene            2623..2922
                     /locus_tag="U1041_001237"
     CDS             2623..2922
                     /locus_tag="U1041_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007518994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEM4768349.1"
                     /translation="MNLYDVIKKPVITESSMGQLEAGKYVFEVDTRAHKLLIKQAVEA
                     AFEGVKVANVNTINVKPKTKRVGRYVGRTNKVKKAIITLTADSKAIELFATADAE"
     gene            2940..3773
                     /gene="rplB"
                     /locus_tag="U1041_001238"
     CDS             2940..3773
                     /gene="rplB"
                     /locus_tag="U1041_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019790357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEM4768350.1"
                     /translation="MGIKVYKPTTNGRRNMTSLDFAEITTSTPEKSLLVALKSKAGRN
                     NNGRITVRHQGGGHKRFYRLIDFKRNKDGVEAIVKTIEYDPNRSANIALVHYTDGVKA
                     YIIAPKGLEVGQRIVSGPEADIKVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGA
                     SAQVLGQEGKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWKGIRP
                     TVRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNQ
                     K"
     gene            4024..4305
                     /gene="rpsS"
                     /locus_tag="U1041_001239"
     CDS             4024..4305
                     /gene="rpsS"
                     /locus_tag="U1041_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEM4768351.1"
                     /translation="MGRSLKKGPFVDEHLMKKVEAQANDEKKKVIKTWSRRSTIFPSF
                     IGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPTRTYKGHAADDKKTRRK"
     gene            4323..4667
                     /gene="rplV"
                     /locus_tag="U1041_001240"
     CDS             4323..4667
                     /gene="rplV"
                     /locus_tag="U1041_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEM4768352.1"
                     /translation="MAEITSAKATARTVRVSPRKSRLVLDNIRGKSVADAIAILKFTP
                     NKAAGIIEGVLNSAIANAENNFGLEKANLVVSEAFANEGPTLKRFRPRAKGSASPINK
                     RTAHITVVVAEK"
     gene            4680..5333
                     /gene="rpsC"
                     /locus_tag="U1041_001241"
     CDS             4680..5333
                     /gene="rpsC"
                     /locus_tag="U1041_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEM4768353.1"
                     /translation="MGQKVHPIGMRVGIIRDWDAKWYAEKEYADYLHEDLAIRNFIKK
                     ELADASTSTIEIERAVNKVIVSIHTAKPGMVIGKAGSNVDALRAQLNKLTGKQVHINI
                     IEIKQPDLDAHLVGESIARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGAD
                     IARAEGYSEGTVPLHTLRADIDYAWEEALTTYGKLGVKVWIYRGEVLPARKNTKGGK"
     gene            5337..5750
                     /gene="rplP"
                     /locus_tag="U1041_001242"
     CDS             5337..5750
                     /gene="rplP"
                     /locus_tag="U1041_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003029477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEM4768354.1"
                     /translation="MLVPKRVKHRREFRGKMRGEAKGGKQVDFGQYGLQATTSSWITN
                     RQIEAARIAMTRYMKRGGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRGKV
                     MFEVAGVSEEIAREAFRLAGHKLPVKVKFVKREAE"
     gene            5760..5966
                     /locus_tag="U1041_001243"
     CDS             5760..5966
                     /locus_tag="U1041_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006739716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEM4768355.1"
                     /translation="MKLQEIKDFVKELRGLSQEELAKKENELKKELFELRFQAAAGQL
                     EQTARLNEVKKQIARIKTVQSETK"
     gene            5990..6250
                     /gene="rpsQ"
                     /locus_tag="U1041_001244"
     CDS             5990..6250
                     /gene="rpsQ"
                     /locus_tag="U1041_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006738952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEM4768356.1"
                     /translation="MERNNRKVLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKK
                     YKAHDENNVAKEGDIVRIMETRPLSATKRFRLVEVVEEAVII"
     gene            6275..6643
                     /gene="rplN"
                     /locus_tag="U1041_001245"
     CDS             6275..6643
                     /gene="rplN"
                     /locus_tag="U1041_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEM4768357.1"
                     /translation="MIQTETRLKVADNSGAREILTIKVLGGSGRKFANIGDIIVASVK
                     QATPGGAVKKGDVVKAVIVRTKTGARRADGSYIKFDENAAVIIREDKTPRGTRIFGPV
                     ARELRDGGFMKLVSLAPEVL"
     gene            6724..7029
                     /gene="rplX"
                     /locus_tag="U1041_001246"
     CDS             6724..7029
                     /gene="rplX"
                     /locus_tag="U1041_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEM4768358.1"
                     /translation="MFVKKGDKVRVIAGKDKGVEAVVVTALPKVNKVIVEGVNIVKKH
                     QKPNSENPQGAIVEKEAPIHVSNVQVLDKNGVAGRVGYKFVDGKKVRYNKKSGEVLD"
     gene            7053..7595
                     /gene="rplE"
                     /locus_tag="U1041_001247"
     CDS             7053..7595
                     /gene="rplE"
                     /locus_tag="U1041_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEM4768359.1"
                     /translation="MANRLKEKYLNEVVPALTEQFNYSSVMAVPKVDKIVLNMGVGDA
                     VSNAKNLEKAAQELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLD
                     KLVTVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFDDVDKTRGMDIVIVTT
                     ANTDEESRALLTGLGMPFAK"
     gene            7610..7795
                     /locus_tag="U1041_001248"
     CDS             7610..7795
                     /locus_tag="U1041_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEM4768360.1"
                     /translation="MAKKSMIAKNKRPAKFSTQAYTRCEKCGRPHSVYRKFKLCRVCF
                     RDLAYLGQIPGVTKASW"
     gene            8102..8500
                     /gene="rpsH"
                     /locus_tag="U1041_001249"
     CDS             8102..8500
                     /gene="rpsH"
                     /locus_tag="U1041_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEM4768361.1"
                     /translation="MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIATILKNEG
                     FVKNVEFIEDDKQGIIRVFLKYGPNGEKVITNLKRVSKPGLRVYSKREDIPKVLNGLG
                     IAIISTSEGLLTDKQARQKNVGGEVIAYVW"
     gene            8877..9413
                     /gene="rplF"
                     /locus_tag="U1041_001250"
     CDS             8877..9413
                     /gene="rplF"
                     /locus_tag="U1041_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEM4768362.1"
                     /translation="MSRIGNKVITLPAGVELAQNNGVVTVKGPKGELTREFPTAIEIR
                     VEGTEVTLHRPNDSKEMKTIHGTSRANLNNMVVGVSEGFKKELEMRGVGYRAQLAGNK
                     LTLAVGKSHPDEVVAPEGITFEVPTPTQIVVSGINKEVVGQTAAYIRSLRAPEPYKGK
                     GIRYVGEFVRRKEGKTGK"
     gene            9502..9858
                     /gene="rplR"
                     /locus_tag="U1041_001251"
     CDS             9502..9858
                     /gene="rplR"
                     /locus_tag="U1041_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEM4768363.1"
                     /translation="MISKPDKNKIRQKRHRRVRGKISGTAARPRLNIFRSNTGIYAQV
                     IDDVAGVTLASASTLDKEVSKGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLYHG
                     RVKALAESARENGLKF"
     gene            9877..10371
                     /gene="rpsE"
                     /locus_tag="U1041_001252"
     CDS             9877..10371
                     /gene="rpsE"
                     /locus_tag="U1041_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEM4768364.1"
                     /translation="MAFKDNAVEIEERVVAINRVTKVVKGGRRLRFAALVVVGDRNGR
                     VGFGTGKAQEVPEAIRKAVESAKKNMIEVPMVGTTIPHEVRSEFGGARVLLKPASEGS
                     GVAAGGATRAVIELAGIADVTSKSLGSNTPINIVRATVEGLKQLKRAEEVAALRGISV
                     SDLA"
     gene            10386..10568
                     /gene="rpmD"
                     /locus_tag="U1041_001253"
     CDS             10386..10568
                     /gene="rpmD"
                     /locus_tag="U1041_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEM4768365.1"
                     /translation="MAQIKITLIKSPIGRKPEQRKTVVALGLGKLNSSVVKEDNPAIL
                     GMVNAISHLVTVEEVK"
     gene            10704..11144
                     /gene="rplO"
                     /locus_tag="U1041_001254"
     CDS             10704..11144
                     /gene="rplO"
                     /locus_tag="U1041_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004225266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEM4768366.1"
                     /translation="MKLHELQPATGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGG
                     GVRPGFEGGQTPLFRRLPKRGFTNINAKEYAIVNLDQLNAFEDGAEVTPVVLIEAGIV
                     KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITSKGGSVEVI"
     gene            11158..12468
                     /gene="secY"
                     /locus_tag="U1041_001255"
     CDS             11158..12468
                     /gene="secY"
                     /locus_tag="U1041_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEM4768367.1"
                     /translation="MFFKLLKDALKVKLVRSKILFTIFILFVFRVGTHITVPGVNAKS
                     LEALSNVPFLNMLSLVSGNAMRNFSVFALGVSPYITASIIVQLLQMDILPKFVEWGKQ
                     GEVGRRKLNQATRYISLVLAFVQSIGITAGFNALSGAKLTNMPLNWQTYLLIGSILTT
                     GSIIVTWLGEQISEKGYGNGTSMIIFAGIISSLPGTFHEIYIDRFVNIESSRFGESAI
                     FVAALVVLIFFVVYFTTFVQQAEYKLPIQYTKRAQGAPSSSYLPLKLNPSGVIPVIFA
                     GSITAVPTSLIQYFASQNKSAGWLLTVQEYFDYSTAKGMIVYAGLIIAFTFFYTFVQV
                     NPEKTAESLQKSAAYIHGVRPGNGTEQFLSKLLTRLAVIGALFLSFVALLPILAQNLF
                     GLSSSIAFLGTSLIIVISTSIEGIKQLEGYLLKRKYVGFLEITE"
     gene            12562..13203
                     /locus_tag="U1041_001256"
     CDS             12562..13203
                     /locus_tag="U1041_001256"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001050429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEM4768368.1"
                     /translation="MNLLIMGLPGAGKGTQAAKIVEKFNVAHISTGDMFRAAMANQTE
                     MGILAKSYIDKGDLVPDEVTNGIVKERLVQDDIKEKGFLLDGYPRTIEQAHALDENLA
                     DLGIELQGVINIEIDPSKLVERLSGRIIHKETGETFHKVFNPPVGDYKEEDFYQREDD
                     KPESVKRRLEVNIAQGQPIIDHYRAKGLVHDIEGDQDIDLVFQAIDTVLSKLQ"
     gene            13325..13543
                     /gene="infA"
                     /locus_tag="U1041_001257"
     CDS             13325..13543
                     /gene="infA"
                     /locus_tag="U1041_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003130554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEM4768369.1"
                     /translation="MAKEDVIEIEGKVVDTMPNAMFTVELENGHQVLATVSGKIRKNY
                     IRILVGDRVTVELSPYDLTRGRITYRFK"
     gene            13568..13684
                     /gene="rpmJ"
                     /locus_tag="U1041_001258"
     CDS             13568..13684
                     /gene="rpmJ"
                     /locus_tag="U1041_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013773089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEM4768370.1"
                     /translation="MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG"
     gene            13704..14069
                     /gene="rpsM"
                     /locus_tag="U1041_001259"
     CDS             13704..14069
                     /gene="rpsM"
                     /locus_tag="U1041_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEM4768371.1"
                     /translation="MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVR
                     VKDLTSDQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNT
                     KNNARTRKGKAVAIAGKKK"
     gene            14087..14470
                     /gene="rpsK"
                     /locus_tag="U1041_001260"
     CDS             14087..14470
                     /gene="rpsK"
                     /locus_tag="U1041_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003130556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEM4768372.1"
                     /translation="MAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSS
                     AGALGFKGSRKSTPFAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAG
                     LEVTAIRDVTPVPHNGARPPKRRRV"
     gene            14515..15453
                     /locus_tag="U1041_001261"
     CDS             14515..15453
                     /locus_tag="U1041_001261"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEM4768373.1"
                     /translation="MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLA
                     SLPGAAVTSIKIDGVLHEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKKIELDVVGP
                     AEVTAGDILTDSDIEIVNSDHYLFTIADGAAFKAVLTVNSGRGYVPAEGNKKDDAPVG
                     TLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTLEINTNGTIIPEDALGLSARILMEH
                     LGLFTDLTEVAKSAEVMKEAEVASDDRMLDRTIEELDLSVRSYNCLKRAGINTVFDLT
                     EKTEPEMMKVRNLGRKSLEEVKVKLADLGLGLKKDK"
     gene            15468..15854
                     /gene="rplQ"
                     /locus_tag="U1041_001262"
     CDS             15468..15854
                     /gene="rplQ"
                     /locus_tag="U1041_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEM4768374.1"
                     /translation="MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTV
                     EKMITLGKRGDLHARRQAAAFVRNEIASENYDEATDKYTSTTALQKLFSEIAPRYAER
                     NGGYTRILKTEPRRGDAAPMAIIELV"
     gene            16068..17348
                     /locus_tag="U1041_001263"
     CDS             16068..17348
                     /locus_tag="U1041_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008536077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcysteine synthetase"
                     /protein_id="HEM4768375.1"
                     /translation="MTSLGNCFEEHYFANIKEKPELFIGVELEYPIVNISGKATSIQV
                     ATDMMRHISNQNGFTIVKRDDRGNPIELQHESGDLILFEVTYNTLEFAFAKAKNIGSL
                     EERHKEYLENIQYYLRQNGHELQGLGINPNWEDNDNRPVDTGRYRMLMNYLKLGEGKP
                     NMHPYTGYAGFICGNQVQFDVSRKSFLRVINAFNKIEAAKAFLFANSPFDHMDDMALT
                     RDYFWEYSMHGLLKNNVGIYSEEFRTEAEYRQYQEESAMFYVIRDNYYYYFKPITVKS
                     FFEQEKFAAYSETGEICYFVPKADDFKNHRSYHYQELTKRGTVEFRSTCTQPFETTFA
                     PIAFHLGLFANLVKLEEILECTEFFKEFGRDYSKLRRQFSRKKLSDLEQRMVKDFSKT
                     LLDCAHEALLLRGYSEEKYLTPLYNSLIDDFGVL"
BASE COUNT         5652 a         3341 c         3785 g         4907 t
ORIGIN      
        1 gaatgataaa ccatatttac taattagtag acaaaaatgt cctgttggaa atcgtgcctt
       61 ttcgataaac ttaaaccatc aaacaaaggg gatgggatga tgaaatttga aaaggtctat
      121 gatagcgtaa aagggattgt caacaaggct cgaaaagagt tttatattaa gctctgggac
      181 agggaagatt gggatcaaga gggcatgatg accttgtttg aattattgga agatcaaccg
      241 tggttagttg atgagcagga acaattatat tgctatttca aagtgaagtt cagaaatcga
      301 attaaagacc gcgtgcgcag acaagaaagt cagaagcgta agtttgatcg tatgccacat
      361 gaagacattc atgatttatc tcacgttata caatcgccag gtttagtcaa tgatgagctg
      421 ttaatgttga gaggagcctt gagggattat cgaaaaaaac taagcaatga ccagcttgca
      481 aattatgaaa aactaattag tggtcagagt ttcaatggtc gtcgaaaaat gatacgtgat
      541 ctacaaatcc atttgaagga ttttcgctga tagtcttctg aataaaagaa atagagtgag
      601 ttcaaaaaga tcttaaaaca agtgttttaa gatctttttg aatttttaag taaaaactct
      661 tgcacatgca ggagtttttt gatatcatgt tctagtgccg taaaaattac ggctgtagct
      721 ttgatgcaag aggttgcgac acgctcggtt gcattgccac gcaacacgtg ttggttttct
      781 tgtggagcta gcctattatg ttaaatagac gaaaaggaga aaaagatggc aaacaaaaaa
      841 atccgcatcc gcttgaaagc gtacgaacac cgtacacttg atacagcagc tgcaaaaatc
      901 gttgaaactg caacacgtac aggtgctcaa gtagctggtc cagttccgct tccaacagaa
      961 cgtagcctct acacaatcat ccgtgcgact cacaagtaca aagactctcg tgagcagttc
     1021 gaaatgcgta cacacaaacg tttgatcgac atcatcaacc caactcaaaa aacagttgat
     1081 gctttgatga aattggatct tccaagtggt gtaaacgtag aaattaaatt gtaatcaagt
     1141 agcaaggtag aaaagcaagt gttcgtcaag taatcgaaca cgggctaaac tccgtgtgaa
     1201 aaagataaac tttcctagaa acagaagttt cttcgtcaag tttcctattt tcactttgag
     1261 tttgacgccc tttgtatctt ggtttgagca tgaaaaacgc tcgttaaaaa ctttttaact
     1321 ataaaataag aaaaggaata tttttctcat gacaaaagga atcttaggga aaaaagtggg
     1381 aatgactcaa atcttcactg aatctggtga atttatccct gtaactgtca tcgaagcaac
     1441 tccaaacgtt gttcttcaag tgaaaacagt tgaaactgac ggttatgcgg cagttcaagt
     1501 tggttttgat gacaaacgcg aagtattgag caacaaacct gccaaaggcc atgtagctaa
     1561 agctaacact gctcctaagc gcttcattcg tgaattcaaa aacattgaag gcttggaagt
     1621 tggacaagaa attacagttg aaactttcgc agctggtgat gttgttgatg taactggtac
     1681 atctaaaggt aaaggtttcc aaggtgttat caaacgccat ggtcaatcac gtggtcctat
     1741 ggctcacggt tctcgttacc accgtcgtcc aggttctatg ggtcctgttg cacctaaccg
     1801 tgtattcaaa ggtaaaaacc ttgcaggccg tatgggcggc aaccgtgtaa caattcaaaa
     1861 ccttgaagtt gtacaagttg ttccagaaaa gaacgttatc cttatcaaag gtaacgtacc
     1921 aggtgctaag aaatctctta tcactatcaa gtcagcagtt aaagctggta aataataagg
     1981 aaaggggaaa tcagtcgaaa tggcaaacgt aacattattt gaccaaactg gtaaacaagc
     2041 tggtgaagta gttcttaacg acgcgatctt tggtattgag ccaaaccaag cagttgtatt
     2101 tgatgtaatc atcagccaac gtgctagcct tcgtcaaggt actcacgcag ttaaaaaccg
     2161 ttcagcagtc tcaggtggcg gacgcaaacc atggcgtcaa aaaggaactg gacgtgctcg
     2221 tcaaggttct atccgttcac cacaatggcg tggcggtggc gtagtcttcg gaccaactcc
     2281 acgttcatac gcgtacaaac ttccacaaaa agttcgtcgc ttggcactta aatctgttta
     2341 ctcagaaaaa gttgctgaaa acaaatttgt agctgttaac tcacttgaat tcacagctcc
     2401 aaaaactgct gaatttgcaa aagtgcttgc agcattgagc attgattcta aagtccttgt
     2461 tattcttgaa gaaggcaacg aattcgcagc tctttctgct cgtaacatcc caggagttaa
     2521 agttgcaact gcaacaactg caagcgtact tgacatcgca aatgcagaca aacttcttgt
     2581 aactcaagca gctatctcta aaattgagga ggttcttgca taatgaattt gtatgatgtt
     2641 atcaaaaaac ctgtcatcac agaaagctca atgggccaac tcgaagcagg caagtatgta
     2701 tttgaagttg acactcgtgc gcacaaactc ttgattaagc aagctgttga agctgcattc
     2761 gagggtgtta aagttgcgaa tgtgaacaca atcaacgtga aacctaaaac aaaacgcgta
     2821 ggtcgttatg taggtcgcac aaataaagtg aaaaaagcaa tcatcacatt gactgctgat
     2881 tcaaaagcga tcgaattgtt cgctacagct gacgctgaat aatcaaagga ggaattaacg
     2941 tgggtattaa agtttataaa ccaacgacaa atggccgtcg taacatgact tctttggact
     3001 tcgctgaaat tacaacaagc actccagaaa aaagcttgct tgttgctttg aagagcaaag
     3061 ctggtcgtaa caacaacggt cgcatcactg ttcgtcacca aggtggcggt cacaaacgtt
     3121 tctaccgttt gattgacttc aaacgtaaca aagatggcgt tgaagcaatc gttaaaacga
     3181 tcgagtacga tccaaaccgt tcagcaaaca tcgctcttgt acactacaca gacggtgtta
     3241 aagcttatat cattgctcct aaaggtcttg aagttggtca acgcatcgtt tcaggtccag
     3301 aagcagatat caaagttggt aacgcacttc cacttgcaaa catcccagtc ggtactgttg
     3361 ttcacaacat cgagttgaaa ccaggtcgtg gtggtgagtt ggttcgtgct gctggtgcat
     3421 ctgcacaggt tcttggtcaa gaaggtaaat acgttcttgt tcgccttcaa tcaggtgaag
     3481 ttcgtatgat ccttggtact tgccgtgcta ctgttggtac tgtaggtaac gaacaacatg
     3541 gccttgttaa ccttggtaaa gcaggtcgta gccgttggaa aggtatccgt ccaacagttc
     3601 gcggttctgt aatgaaccct aacgatcacc cacacggtgg tggtgaaggt aaagcaccag
     3661 ttggtcgtaa agcaccatct acaccatggg gtaaaccagc tcttggtttg aaaactcgta
     3721 acaagaaagc taaatctgac aaacttatcg ttcgtcgtcg caaccaaaaa taatctattc
     3781 ttagttgctt agcattctat atcatccgcc aactcggtag ggtttgttat ggactgacta
     3841 ttccagcacc tcagtttgat tgaaatgcca gtttgacgca gtagttgatt gcagtttcta
     3901 gtagcttagc tatgtcgaaa cttctaatca actgtgcggg ggcaggacaa cgaacacggg
     3961 aactggggtt ctgtccagct cccaagccgc tgtggtacat attttaaagg agaaaacact
     4021 aaaatgggac gtagtcttaa aaaaggacct ttcgtcgatg agcatttgat gaaaaaagtt
     4081 gaagctcaag caaatgacga aaagaaaaaa gtaattaaaa cttggtcacg tcgttcaacg
     4141 atcttcccaa gtttcatcgg ttatacaatc gcagtttacg atggacgtaa acacgtacct
     4201 gtatacattc aagaagacat ggtaggtcac aaacttggtg aatttgcacc aactcgtact
     4261 tacaaaggtc atgctgctga cgacaagaaa actcgtcgta aataatttag gaggaaaaca
     4321 caatggcaga aattacttca gctaaagcaa ctgctcgcac agtacgtgtt tcacctcgta
     4381 aatcacgtct tgtcttggat aatatccgtg gcaaaagcgt agcagatgca atcgcaatct
     4441 tgaaattcac accaaacaaa gctgcaggca ttatcgaggg agttttgaac tcagcaatcg
     4501 ctaacgctga aaacaacttt ggtttggaaa aagctaactt ggtagtcagc gaagcattcg
     4561 caaacgaagg accaacgttg aaacgtttcc gtccacgtgc gaaaggttca gcttcaccaa
     4621 ttaacaaacg cacagctcac atcactgtag ttgtggcaga gaaataagga ggtaaaaacg
     4681 tgggtcaaaa agtacatcca attggtatgc gtgttggcat catccgtgat tgggatgcta
     4741 aatggtatgc tgaaaaagaa tacgcggatt accttcatga agatcttgca atccgcaact
     4801 ttatcaaaaa agaattggct gatgcgtcaa catcaacaat cgaaatcgaa cgtgctgtaa
     4861 acaaagttat cgtttctatc cacactgcta aaccaggtat ggttatcggt aaagctggta
     4921 gcaacgttga tgcacttcgt gctcaattga acaaattgac tggcaaacaa gtacacatca
     4981 acatcatcga aatcaaacaa cctgatttgg atgcacacct tgttggtgag tcaatcgctc
     5041 gtcaattgga gcaacgtgtg gcattccgcc gtgctcaaaa acaagcaatc caacgtgcaa
     5101 tgcgcgctgg tgcaaaaggt atcaaaacac aagtttctgg tcgtttgaac ggtgctgata
     5161 ttgcccgtgc agaaggctac tcagaaggaa ctgttcctct tcatacactt cgtgcggata
     5221 tcgactacgc ttgggaagaa gctttgacaa cttacggtaa acttggtgtt aaagtatgga
     5281 tctaccgtgg tgaagttctt ccagctcgta aaaacactaa aggaggtaaa taacaaatgt
     5341 tagtacctaa acgtgtaaaa caccgtcgtg aattccgtgg aaaaatgcgc ggtgaagcta
     5401 aaggtggaaa acaagtagac tttggtcaat acggtcttca agcaactact agctcatgga
     5461 ttacaaaccg ccaaatcgaa gctgcccgta tcgctatgac gcgttacatg aaacgtggtg
     5521 gtaaagtttg gattaaaatc ttcccacaca aatcatacac tgctaaagct atcggtgtac
     5581 gtatgggttc tggtaaaggt gctcctgaag gttgggtagc tccagttaaa cgcggtaagg
     5641 ttatgtttga agtagctggc gtttctgaag aaatcgctcg cgaagcattc cgccttgctg
     5701 gtcacaaatt gccagttaaa gttaaattcg taaaacgtga agcagaataa ggagaagaca
     5761 tgaaacttca agaaattaaa gattttgtaa aagaacttcg tggcctttct caagaagaac
     5821 ttgctaagaa agaaaacgaa ttgaagaaag aactcttcga acttcgtttc caagctgctg
     5881 ctggtcaact tgagcaaact gctcgtttga acgaagtgaa gaaacaaatt gcacgtatca
     5941 aaactgtgca atctgaaact aaataataga ttgggaaagg agaatttcaa tggaacgcaa
     6001 taatcgtaaa gttcttgttg gacgcgtagt atctgacaaa atggacaaaa caatcacagt
     6061 tgtagttgaa actaaacgta accacccagt ctatggtaaa cgtattaact actctaaaaa
     6121 gtacaaagct catgatgaaa acaatgttgc taaagaaggc gatatcgttc gtatcatgga
     6181 aactcgccca ctttcagcta caaaacgttt ccgtcttgta gaagttgtgg aagaggcagt
     6241 tatcatttaa tcaacctgaa aggagaaaat tgacatgatt caaacagaga ctcgtttgaa
     6301 agttgctgac aacagtggcg cacgtgaaat cttgacaatc aaagttcttg gtggttcagg
     6361 acgtaaattc gcgaacatcg gcgacatcat cgttgcttca gtaaaacaag ctactcctgg
     6421 tggtgcggtt aaaaaaggtg acgttgtaaa agccgttatc gttcgtacta agacaggtgc
     6481 tcgtcgtgct gatggttctt acatcaaatt cgatgagaat gctgcagtta tcatccgtga
     6541 agataaaaca cctcgcggaa ctcgtatctt tggcccagtg gcacgcgaat tgcgtgacgg
     6601 cggtttcatg aaactcgttt cattggcacc agaagtactt taatctaaca aactaagtcc
     6661 cctgttatct caccagagta acagggtgcc cattagggcg taagaaatca taggagaaat
     6721 caaatgtttg taaaaaaagg cgataaagtt cgcgtaatcg ctggtaaaga caaaggcgtt
     6781 gaagcagttg tcgtaacagc acttccaaaa gtaaacaaag ttattgttga aggtgttaac
     6841 atcgttaaga aacaccaaaa accaaatagc gaaaaccctc aaggtgctat cgttgaaaaa
     6901 gaagctccaa tccatgtgtc aaacgttcaa gttcttgaca aaaatggtgt tgcaggacgc
     6961 gttggttaca agtttgtaga cggcaaaaaa gttcgctaca acaaaaaatc aggcgaagtg
     7021 cttgattaat cacgaaggaa aggagaagta taatggcaaa tcgtttaaaa gaaaaatatc
     7081 ttaatgaagt agttcctgct ttgactgaac aatttaacta ttcttcagtt atggctgtgc
     7141 caaaagttga taagatcgtt ttgaacatgg gtgttggtga cgctgtttct aacgctaaaa
     7201 accttgagaa agctgctcaa gaattggctt tgatctcagg tcaaaaacca cttatcacta
     7261 aagctaagaa atcaatcgcc ggcttccgtc ttcgtgaggg tgttgcaatc ggtgcgaaag
     7321 taactcttcg tggcgaacgt atgtatgagt tcttggacaa attggttaca gtttcacttc
     7381 cacgtgtacg tgacttccac ggagtaccaa ctaagtcatt tgacggacgt ggtaactaca
     7441 cacttggtgt gaaagagcaa ttgatcttcc cagaaatcaa cttcgacgat gttgataaga
     7501 ctcgcggtat ggatatcgtt atcgttacaa ctgctaacac tgacgaagaa tcacgtgcat
     7561 tgcttactgg ccttggtatg ccgtttgcaa aataagaggg agagaataaa tggctaaaaa
     7621 atcaatgatc gctaagaaca aacgcccagc taagttctct acacaagctt acacacgctg
     7681 tgaaaaatgt ggacgtccac actcagttta ccgcaaattc aaattgtgcc gtgtatgctt
     7741 ccgcgacttg gcttaccttg gacaaattcc tggcgtaaca aaagcttctt ggtaagataa
     7801 gatgtgagag cgtttagcaa ccaaggcaaa gataggagat ttgacgatga agtttacttc
     7861 taggaaaatc tatcttcttt gctaagcttg tagctcgaac tcaattaaaa caaccccgat
     7921 acaaagtttg cttgccgatt tgaacacggg cgaaagcctg tgtgaaaaag acaaactttc
     7981 ctagaaacca aagtttctac gtcaagtttt ctattttcac tttggctttt tagcgccctt
     8041 tgtatcatga attaactagc aagtgatcca atcaaactgc tagtaagagg agaaacaaca
     8101 aatggttatg actgacccaa ttgcagattt tttgacacgt attcgtaacg ctaaccaagc
     8161 aaaacacgaa gtgcttgaag ttcctgcatc aaacatcaaa aaaggcattg ctacaatcct
     8221 taaaaacgaa ggttttgtaa aaaacgttga attcatcgaa gatgacaaac aaggcatcat
     8281 ccgtgtattc ttgaaatacg gaccaaacgg tgaaaaagtt atcacaaact tgaaacgcgt
     8341 ttcaaaacca ggtcttcgtg tttactcaaa acgtgaagat attccaaaag ttcttaacgg
     8401 acttggtatc gcaatcatct caacatcaga aggtcttttg actgacaaac aagctcgtca
     8461 aaagaacgtt ggtggtgagg ttatcgcata cgtttggtaa tcttttagct tccaatttcg
     8521 tcatgtgcct gtgttagagc gtcttgacat actcaagtat ggtctgcgtc gctctgcctt
     8581 gccacattta gaaattgaaa cctaaaagca tgatacaaat gcgagaggac caactcttcg
     8641 tgcgcgttca aatcagacgt actgattatt tagtatcatg taaccaaact agaacaagat
     8701 tcattaattg aacacgccta caactctttg aaaaaagata aactctcctt agatgctcaa
     8761 gcatcagcag tcgagtttcc tatttttctt tgagttgctt aacggctttg tatcttgttc
     8821 accccgtgaa aactagtcgc ttgacggctt gataatttaa caggagaaat aaaaatatgt
     8881 cacgtattgg taataaagta attacattgc ctgctggtgt tgagcttgct caaaacaacg
     8941 gtgtggtaac tgtaaaagga cctaaagggg aattgactcg tgaattccca actgctattg
     9001 aaatccgtgt ggaaggtaca gaagttactc ttcaccgtcc aaacgattca aaagaaatga
     9061 agactattca cggtactagc cgtgctaacc tcaacaacat ggttgttggt gtttctgaag
     9121 gcttcaaaaa agaacttgaa atgcgtggtg tcggttaccg tgctcaattg gctggtaaca
     9181 aattgacact tgctgttggt aaatcacatc cagacgaagt ggttgcacca gaaggtatca
     9241 catttgaagt tccaacacca acacaaatcg tcgtgtctgg tatcaacaaa gaagttgttg
     9301 gtcaaacagc agcttacatc cgtagccttc gcgctcctga gccatacaaa ggtaaaggta
     9361 tccgctacgt tggtgaattc gttcgccgta aagaaggtaa aacaggtaaa taatagcttg
     9421 ctgaggtggc tgagccacct ggctgactat ttctcaaatt gtttcgttag aaacagaatc
     9481 atacattaag aggtgaatat tgtgatttca aaaccagata aaaacaaaat ccgccaaaaa
     9541 cgccaccgtc gcgttcgcgg taaaatctct ggaactgctg ctcgcccacg tttgaacatt
     9601 ttccgttcta atacaggcat ctacgctcaa gtgattgatg acgtagcggg tgtaacgctc
     9661 gcaagcgctt ctactcttga taaagaagtt tcaaaaggta ctaagacaga acaagctgtt
     9721 gttgtaggta aactcgttgc tgaacgcgcg gtagctaaag gtatttctga agtggtcttt
     9781 gaccgcggtg gatatctcta tcacggacgt gtgaaagctt tggctgaatc agctcgtgaa
     9841 aacggattga aattctaata gggaggacac taagaaatgg cattcaaaga taacgcagtt
     9901 gaaattgaag aacgcgtagt agccatcaac cgtgttacaa aagttgttaa aggtggacgt
     9961 cgtcttcgtt ttgcagctct tgtggttgtt ggtgaccgta acggtcgcgt aggtttcggt
    10021 actggtaaag ctcaagaagt accagaagct atccgtaaag cagttgaatc tgctaagaaa
    10081 aacatgattg aagtaccaat ggttggtaca acaatccctc acgaagttcg ctcagaattt
    10141 ggcggcgctc gtgtattgtt gaaacctgct tcagaaggtt ctggggttgc tgccggtggt
    10201 gcaactcgtg ccgtaatcga attggcaggt atcgcagatg tgacttctaa gtcacttggt
    10261 tcaaacacac caatcaacat cgttcgcgca acagttgaag gtttgaaaca attgaaacgt
    10321 gctgaagaag tggctgcact tcgtggcatc tcagtttctg atttagcata agaaaggaga
    10381 tactcatggc tcaaattaaa atcactttga ttaagtctcc aatcggtcgc aaaccagaac
    10441 aacgtaaaac agttgttgca cttggacttg gcaaattgaa ctcttcagtt gttaaagaag
    10501 ataatccagc tattcttgga atggttaacg ctatctctca cttggtaact gtagaagaag
    10561 ttaaataatc taacaaatag actaagtcgc attgagaaat ctttgcgact tctagtccat
    10621 tttacatatt tacatacagc gagtttgtgg aagaagactc ttgtacttca caggcgctag
    10681 catataaaag aggagaaata ataatgaaac ttcatgaatt acaacctgct acaggttctc
    10741 gtaaagtccg caaccgtgta ggtcgtggta catcatcagg taacggtaaa acatctggcc
    10801 gtggtcaaaa aggtcaaaaa gctcgtagcg gtggcggtgt tcgcccaggt tttgaaggtg
    10861 gacaaactcc attgttccgt cgtcttccaa aacgtggatt tacaaatatc aacgctaaag
    10921 agtacgcaat cgttaacctt gatcaattga acgcttttga agatggtgca gaagtaacac
    10981 cagttgtgct tatcgaagct ggaatcgtta aagctgaaaa atcaggaatt aaaattcttg
    11041 gtaacggtga attgacgaag aaattgacag ttaaagctgc taaattctct aaatcagctg
    11101 aagaagcaat cacttctaaa ggtggctcag tagaagtcat ctaagaggtg acagcctatg
    11161 ttttttaaac ttttaaaaga tgccttaaag gtaaaattgg tacgtagtaa aattctattt
    11221 actatcttta tcctttttgt cttccgtgta ggaacccaca ttacagtacc aggagtaaac
    11281 gcaaagagtc ttgaagcctt gtcaaacgtt ccatttttga acatgttgag tttggtttcg
    11341 ggaaatgcta tgcgtaattt ctcagttttc gcactaggtg ttagtcctta tattacagct
    11401 tccatcattg ttcaactttt gcaaatggat attttaccta aatttgttga atggggtaag
    11461 caaggtgaag ttggtcgtcg taaactgaat caggcaacac gctacatttc tttggtactg
    11521 gcatttgttc aatctattgg tattacagca ggctttaatg ccttgtctgg tgcaaaattg
    11581 accaatatgc cattaaattg gcaaacatat ttgttgattg gatccatctt gacaacaggt
    11641 tcgattattg taacctggtt gggggaacag atttctgaaa agggctatgg taatggtaca
    11701 tcaatgatca tcttcgcggg tatcatttca tcactaccag gaacttttca cgagatttac
    11761 attgatcgct ttgttaatat tgaatcaagt cgttttgggg agtcagcaat ctttgttgct
    11821 gcactcgtcg tattaatatt ctttgttgtg tattttacaa cttttgtaca acaagcagaa
    11881 tataagttac caattcaata tacaaaacgt gcacaaggag caccttctag ctcatattta
    11941 ccgctgaaat tgaatccatc aggagtcatt cccgtaatct ttgcaggctc aatcactgca
    12001 gttccaactt ctttgattca atatttcgca agtcaaaata agagtgccgg gtggttattg
    12061 acggttcagg aatactttga ttattcaact gctaaaggta tgattgtata tgctggttta
    12121 attattgcct ttacattctt ctataccttt gttcaagtaa atcctgagaa gactgcagaa
    12181 agccttcaga aaagtgcagc ctatatccat ggagttcgtc ctggtaatgg cactgaacag
    12241 tttttgtcaa aattattgac aagattggca gtaatcggtg cgctcttctt gagttttgta
    12301 gctttgttgc ctatccttgc gcaaaatctc tttgggcttt cttcaagcat tgcgttcctt
    12361 ggtacaagtt tgattattgt aatctctaca agtatcgaag gcatcaagca attagaaggc
    12421 taccttctta agagaaaata tgtaggtttc ttagaaatta cagaatagaa tataggttga
    12481 cctagtcaac cttctatttt gtttttagat aagtttgtca ataatggcaa atttatgtga
    12541 aaacaaaata aggagtttgt catgaatctt ttaattatgg gtttaccagg tgctggtaaa
    12601 gggacacaag cggccaagat tgttgagaaa ttcaatgttg ctcatatctc aacaggagat
    12661 atgttccgtg cagcaatggc caatcagact gaaatgggta ttcttgccaa gtcgtacatt
    12721 gataagggtg acctcgttcc cgatgaagtt actaatggca ttgtcaaaga acgtttggtt
    12781 caggatgaca tcaaggaaaa aggcttttta ctagatggat atcctcgtac gattgaacaa
    12841 gcccatgcct tggatgaaaa tttggctgac ttaggaattg agttgcaagg tgttatcaat
    12901 attgagattg atccttcaaa attggtagag cgtctcagcg gtcgtattat tcataaagaa
    12961 accggagaga ctttccacaa agtattcaat ccacctgttg gagactacaa agaggaagac
    13021 ttctatcaac gtgaagatga caagccagaa tctgtcaaac gtcgtttaga ggtcaatatc
    13081 gcacaaggac agccaatcat tgatcattat cgtgcaaaag ggctggtcca tgatattgaa
    13141 ggtgaccaag acattgacct tgttttccaa gcaattgata cagtactatc aaaattgcaa
    13201 taaactaata gatttggctt gcatttttta cacaaagatg ataaaatagc ctagtctgac
    13261 ttataattgt tacctctgtg ttcagaggac atcaaatcga tatttagaga ggggttactt
    13321 ttgcatggca aaagaagatg tgattgaaat tgaaggcaaa gtagtcgata caatgccaaa
    13381 tgctatgttt actgttgagt tggagaacgg acaccaagtc cttgcaactg tttcaggtaa
    13441 aatccgtaaa aactacattc gtattttggt cggtgaccgc gtaactgttg agcttagtcc
    13501 atacgacttg acacgtggac gtatcacata ccgctttaaa tagtcgaaat acttggaggg
    13561 attaaacatg aaagtaagac catcggtcaa accaatttgc gaatactgca aagttattcg
    13621 tcgtaatggt cgtgttatgg tgatttgccc agcaaaccct aaacacaagc aacgtcaagg
    13681 ttaagaaata gaaaggagaa aacatggctc gtattgctgg agttgacatt ccaaatgaca
    13741 aacgtgtagt tatttcatta acttatgttt atggtatcgg tcttgcaaca tctaaaaaaa
    13801 ttcttgcagc tgcaggtatt tcagaagatg tacgcgtgaa agatttgaca tcagatcaag
    13861 aagatgctat tcgtcgtgaa gttgatgcaa tcaaagttga aggtgacctc cgtcgtgaag
    13921 ttaacttgaa catcaaacgt ttgatggaaa tcggttcata ccgtggtatc cgtcaccgtc
    13981 gtggacttcc tgtccgtgga caaaacacta aaaacaatgc ccgcactcgt aaaggtaaag
    14041 ctgttgcgat tgcaggtaag aaaaaataat ataggaggta gaaaaattgg ctaaaccaac
    14101 acgtaaacgt cgtgtgaaaa agaatatcga atctggtatt gctcatattc acgctacatt
    14161 taataacact attgttatga ttactgatgt gcatggtaac gctattgctt ggtcatcagc
    14221 tggtgctctt ggtttcaaag gttctcgtaa atctacacca ttcgcagccc aaatggcttc
    14281 agaagcagct gctaaatctg cacaagaaca cggtcttaaa acagttgaag ttaccgttaa
    14341 aggcccaggt tcaggtcgtg agtctgctat ccgcgctctt gctgccgctg gtcttgaagt
    14401 aacagcaatt cgtgatgtga ctcctgtacc acacaatggt gctcgtcctc caaaacgtcg
    14461 ccgtgtataa tcatacattc catacacagc ttttcgttta agagggagta agaaatgatt
    14521 gagtttgaaa aaccaacaat aacaaaaatt gatgaaaata aagattacgg cagatttgta
    14581 atcgaaccat tagaacgtgg ttacggtaca actcttggta actctcttcg tcgtgtactt
    14641 cttgcctcac ttccaggtgc tgcagtaaca tcaattaaaa ttgatggtgt actccacgaa
    14701 ttcgacacag ttccaggtgt tcgtgaagat gttatgcaaa ttattcttaa catcaaaggc
    14761 attgctgtaa aatcttatgt cgaagacgaa aagaaaattg aacttgatgt agtaggtcca
    14821 gctgaggtaa cagcaggaga cattcttaca gatagtgaca ttgaaattgt aaactctgac
    14881 cattatctct ttaccattgc tgatggtgcc gcttttaaag ctgttttgac tgtcaattca
    14941 ggtcgtggtt atgtaccagc agagggtaat aagaaagatg atgcaccagt gggaacactt
    15001 gctgtagatt ctatctatac gccagtgaag aaagtcaatt atcaagttga accagctcgt
    15061 gttggtagca acgatggttt tgacaaatta acacttgaaa tcaacacaaa tggcaccatt
    15121 attccagaag atgctttagg tctttctgca cgcattttga tggagcactt aggtctcttc
    15181 actgacttga ctgaagttgc aaaatctgca gaagtgatga aagaagctga agtggcttca
    15241 gatgatcgta tgcttgatcg tacgattgaa gaattggacc tatctgttcg ctcatataac
    15301 tgtctgaaac gtgcaggcat taacactgta ttcgacttga cagagaaaac tgagccagaa
    15361 atgatgaaag tgcgcaatct tggtcgcaag agtcttgaag aagttaaagt taaattggct
    15421 gatcttggtc taggattgaa aaaagataaa taatatagga ggaaatcatg gcataccgta
    15481 aactaggacg cactagctca caacgtaaag caatgttgcg cgatttgaca actgaccttt
    15541 tgatcaacga atcaatcgtt acaactgaag ctcgtgctaa agaaatccgt aaaacagttg
    15601 aaaaaatgat cacacttggt aaacgtggtg atttgcacgc acgtcgtcaa gcagcagcat
    15661 ttgttcgtaa cgaaattgca tctgaaaact atgatgaagc aactgataag tacacttcta
    15721 ctacagcact tcaaaaattg ttctctgaaa ttgcacctcg ttatgcagaa cgtaatggtg
    15781 gatatactcg tatcctcaaa actgaaccac gtcgtggtga tgctgcacca atggcaatta
    15841 tcgaacttgt ataagatcat caattttgtt gagtgttatg atgatggaat cctattctga
    15901 ttcttagtct agctctggtc taccgctgag cttgtctcag cggtaacact catcatgttg
    15961 attggacgct tgtttacgaa attactctaa gatagaataa tttcgtaagc aggcgttttt
    16021 attttactca aaaattatga tatacttata aaatgaatag agaagacatg acatccctag
    16081 gcaattgctt tgaagaacac tattttgcta acattaaaga aaagccagaa ttgtttatag
    16141 gtgtagaatt agaatatccg atagttaata tctcagggaa agcaacttct atccaagtgg
    16201 ctacagatat gatgcgacat atttctaatc aaaatgggtt taccatcgtc aaaagagatg
    16261 atagaggaaa tccgatagaa ctccagcacg agtcgggaga cctcatacta tttgaagtca
    16321 cgtataatac actagaattt gcatttgcaa aagcaaaaaa tattggtagt ttagaagagc
    16381 gtcataaaga atatctagag aatattcaat attatttgcg ccaaaatgga cacgaattgc
    16441 aggggttagg gataaatccc aattgggaag ataatgacaa tagaccggta gatacgggcc
    16501 gatataggat gttgatgaac tatctcaagc taggagaagg caaacctaat atgcatccct
    16561 atactggata tgctggcttt atttgcggaa atcaagtgca gtttgatgtg agtcgaaaat
    16621 cctttttacg agtcattaat gcgtttaata aaattgaagc agcgaaggcg tttttgtttg
    16681 caaattcacc attcgatcat atggatgata tggcccttac tagggattat ttttgggaat
    16741 attcaatgca tggcctctta aagaataacg ttggtatcta ttcagaggaa tttcgtactg
    16801 aggcagaata tcgtcaatac caagaagagt ccgcaatgtt ttatgtcatt agggataact
    16861 actattatta ttttaaacca attactgtca aatctttttt tgagcaagaa aaatttgcag
    16921 cgtattcaga aactggcgag atatgttact ttgttccgaa agcagatgat ttcaaaaacc
    16981 atcgctcata ccactatcaa gagcttacca agcgaggaac tgttgaattt cgaagtacat
    17041 gtacacaacc atttgaaaca acgtttgctc ccatagcctt tcatttaggc ctgttcgcca
    17101 atctcgtgaa attggaagaa attttggaat gtacagagtt ttttaaagaa tttggcagag
    17161 attattcgaa gctacgtaga caattttcga gaaaaaaact ttctgattta gaacaaagaa
    17221 tggtgaaaga cttttctaag acattattag attgtgcaca tgaagcactc cttttgagag
    17281 gatacagtga agaaaaatat ttaactccac tgtacaattc attaattgat gacttcgggg
    17341 tattgtgaca gtttactaaa atatgagtag gtagccatag attttcacaa taaacataaa
    17401 gaccggtaaa attttgatat accggaggca tacgaagaaa atatacaatc tctgattagt
    17461 aggtcactca gtttttcgct aaatttcgct aaatttcata aaaaatctaa aaaatatcaa
    17521 aaaaccggtt gacaaagtat ataagtcgtg atagactgat tgagttgtct cttgaaggac
    17581 tggttaacag aggaacgaaa aaagtttcga aaaagtgttg acaagcccat cagaagatga
    17641 tagaataaat gagttgtctc ttgaagagct ggttaacaga ggaac
//
LOCUS       DASFQS010000046        17630 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.046, whole genome shotgun sequence.
ACCESSION   DASFQS010000046 DASFQS010000000
VERSION     DASFQS010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17630
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.046"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            9..434
                     /locus_tag="U1041_001264"
     CDS             9..434
                     /locus_tag="U1041_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002899297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4768376.1"
                     /translation="MSPDIVEDLVTIEAQVMSEQITNLVAYVQNLDKQTSRLTVKKGE
                     QVYLLEHEEIVRLYLEDRLLQVETVENVYTSNLRLYQVKEDLPANFLQISQSEIIHIK
                     QLDHLKLTSNGLVKLVMKNGSVTYSSRRYLKVIKERLGL"
     gene            431..871
                     /locus_tag="U1041_001265"
     CDS             431..871
                     /locus_tag="U1041_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 domain-containing protein"
                     /protein_id="HEM4768377.1"
                     /translation="MKKYILSASLGITIGTIISIITSAVFGQGTYFPLNPFSTMGAYY
                     LSNFNQVTVMMICVVIWAAIGLLFQLADKIFEQDWSLLRMTATHFCITALGFTPLGIL
                     AGWFPVKLGTLIFFWFLFILVYASLFFLNYRKMERQIKDINGRL"
     gene            905..1078
                     /locus_tag="U1041_001266"
     CDS             905..1078
                     /locus_tag="U1041_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768378.1"
                     /translation="MKIILTIVYSLGVVWNILFLAVNVGRIPVINLLWPAVILVACVI
                     NLYFLWTRKQESE"
     gene            1222..3393
                     /gene="nrdD"
                     /locus_tag="U1041_001267"
     CDS             1222..3393
                     /gene="nrdD"
                     /locus_tag="U1041_001267"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HEM4768379.1"
                     /translation="MNVQENVLPSIELLVLKRDGRTVSFDQDKIFSALRRANQELEHP
                     VSEAGLKIVLEAVLAEIGRRFEKDVQIYEIQTVVEQELLKAHLYDLAELYIQYRTRRD
                     FRRHQATDINFEIHKLLSKDQSVVNENANKDADVFNTQRDLTAGIVGKSIGLKLLPAH
                     VANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLAQGFKIGNADVESPKSIQTATAQ
                     ISQIIANVASSQYGGCSADRIDEVLAPYAELNYQKHLKDAKNWVLADKQEEYARAKTQ
                     KDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTSWFEREIQKAILNIRIKGLGREG
                     RTAIFPKLIFTVKRGLNLEPDSPNYDIKQLAIECATKRMYPDMLSYDKIVELTGSFKV
                     PMGCRSFLQGWKDENGQDVTSGRMNLGVVTVNLPRIAMESAGDMDKFWEIFAERMAIA
                     KDALVYRVERVKEATPANAPILYQYGAFGKRLAKTDAVDEVFKNRRATVSLGYIGLYE
                     VATVFYGGEWETNPEAKDFTVDIIKKMKALVEDWSDEYGYHFSVYSTPSESLTDRFCR
                     MDTEKFGIVKDITDKEYYTNSFHYDVRKNPTPFEKLDFEKIYPAVGASGGFIHYCEYP
                     VLQQNPKALEAVWDYAYDRVGYLGTNTPIDHCYACDFEGDFEPTERGFKCPNCGNSDP
                     KSVDVVKRTCGYLGNPQARPMVKGRHKEISARVKHMNGSSL"
     gene            3771..3977
                     /locus_tag="U1041_001268"
     CDS             3771..3977
                     /locus_tag="U1041_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM4768380.1"
                     /translation="MWGIVPGGEGFVVNGRAVESDKDYQIVTNSFVWSGKDNYDDFHK
                     AEIVQDLGLDIDIISEFFKRQYGD"
     gene            3979..4470
                     /locus_tag="U1041_001269"
     CDS             3979..4470
                     /locus_tag="U1041_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768381.1"
                     /translation="MELRRPTIADKETILEMLAEFEKAGSAMDGGFISKDVDFEDWIL
                     RNQDYEAGINLPEGFVPSIQYVSFDQTGRALGFLSLRLRLNDFLLNKGGHIGYSIRPT
                     ERGKGYAKDQLRLGLQEAATKNISKVLVTCSTDNEASRKTIVACGGSLEDIREGVERY
                     WIG"
     gene            4485..5057
                     /gene="nrdG"
                     /locus_tag="U1041_001270"
     CDS             4485..5057
                     /gene="nrdG"
                     /locus_tag="U1041_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HEM4768382.1"
                     /translation="MQEQTWNNPKPGEWKSEELSQGRIMDYKAFNFVDGEGVRCSLYV
                     SGCLFHCPGCYNVATWSFKAGIPYTKELEDRILADLAQPYVQGLTLLGGEPFLNTGTV
                     LPLVKRVRDELPDKDIWSWTGYTWEELMLETPDKLELLSQLDILVDGRYDKSKRNLML
                     QFRGSSNQRIIDVQQSLQENRVILWDKLQK"
     gene            complement(5167..5239)
                     /locus_tag="U1041_001271"
     tRNA            complement(5167..5239)
                     /locus_tag="U1041_001271"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5204..5206),aa:Lys,seq:ctt)
     gene            complement(5247..5440)
                     /gene="ssrS"
                     /locus_tag="U1041_001272"
     ncRNA           complement(5247..5440)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="U1041_001272"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(5649..6065)
                     /locus_tag="U1041_001273"
     CDS             complement(5649..6065)
                     /locus_tag="U1041_001273"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768383.1"
                     /translation="MKIERNFGEVFPYSLHDARITKIEHLDNQLILHMDSLFYYTDNQ
                     TEQIYKATILFEQVDKEDVEFFVFEDTVTGDFSGTCIGLKEYQKKYQDSEFEVIVETY
                     NWRRAVFQGWLWTGATPVTCLMNIFYSGKMLYQIGE"
     gene            complement(6142..7425)
                     /locus_tag="U1041_001274"
     CDS             complement(6142..7425)
                     /locus_tag="U1041_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEM4768384.1"
                     /translation="MPANLALRMRPKSIDDVIGQEHLVGPGKIIRRMIDANMLSSMIL
                     YGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRLQEIAEEAKFSGGLVLLLDEIHR
                     LNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLQTSHIQQALE
                     LALTDSERGFDFPITIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDL
                     DAVENSLQKSYISMDKNGDAHYDILSALQKSIRGSDVNASLHYAARLIEAEDLPSLAR
                     RLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVVVDLALSPKSNSAYL
                     AMDAALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKL
                     LTADYFTANDTGKYERALGMTQEKIKQLKQHKKNV"
     gene            7495..7824
                     /locus_tag="U1041_001275"
     CDS             7495..7824
                     /locus_tag="U1041_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEM4768385.1"
                     /translation="MAELTVSVLEEYLRDHYGTEVPEQSLFMKLVEEIGEVAELLNQR
                     AGRKMMDSEEDSSACLAEELADVIHYAVALAAVNQLDLTKSILEKDKRASVKYGREIN
                     LLEFIVI"
     gene            7936..8406
                     /locus_tag="U1041_001276"
     CDS             7936..8406
                     /locus_tag="U1041_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3013 family protein"
                     /protein_id="HEM4768386.1"
                     /translation="MAKHGFLDVLEAALDKHFTYDYELNWDKKNHAVELAFILEAQNV
                     AGIETVDDEGNASSEDIFLEEYVLFYNQDKSRFDEEDYLVALPFDAKKGFSAEFLTYF
                     ASFLKDTADQGLDDLMDFLANPEAQEFAIAWDGEAFEKGRADLVEGEFYPYPRY"
     gene            8408..8761
                     /locus_tag="U1041_001277"
     CDS             8408..8761
                     /locus_tag="U1041_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HEM4768387.1"
                     /translation="MVHEMLLAPKPFEMMKSGQKTIELRLYDEKRKHIQIGDRIRFYC
                     TENQTQTIEVQVLDLHIFDNFAQLYKELDLLSCGYTQSSIREAKPEDMEVYYSREQLE
                     QYGAVGIELRVIDSI"
     gene            9262..10215
                     /locus_tag="U1041_001278"
     CDS             9262..10215
                     /locus_tag="U1041_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001099287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEM4768388.1"
                     /translation="MNSWQELTIHVHRDAEEVVSNLMIETGSQGVAISDSADYVGQED
                     RFGELYPEVEQSDMIAITAYYPDTVDIEEVKADLATRLADLPGFGLETGQVSLESQEL
                     AEADWADNWKKYYEPARITHDLTIVPSWTDYEATAGEKIIRLDPGMAFGTGTHPTTKM
                     SLFALSQVLRGGETVIDVGTGSGVLSIASSLLGAKEIFAYDLDEVAVRVAQENIDLNA
                     NTSNIHVAAGDLLRGIDIEAEVIVANILADILIHLTEDAYRLVKDEGYLIMSGIIADK
                     WDMVRASAEAAGFFLETHMIQGEWNCCVFKKTADRSGVIGG"
     gene            10217..10963
                     /locus_tag="U1041_001279"
     CDS             10217..10963
                     /locus_tag="U1041_001279"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEM4768389.1"
                     /translation="MQQYFVNGRAPQGVFQISDKDTAKHMFSVMRLQADDQIVLVFDD
                     GIKRLARVVDSQNQSVEIIEELADNVELPVSVTIAMGFPKGDKLEFVAQKATELGMTA
                     LWAFPADWSVVKWDGKKLAKKAEKLEKIAQGAAEQSKRNRIPAIRLFEKKADFLAQLA
                     GFDQIILAYEEAAKKGEQTNLVKTLSGLETGQSVLVIVGPEGGVSPEEVVAFEGAGAV
                     KTGLGPRILRAETAPLYALSAISYATELLR"
     gene            10967..11680
                     /locus_tag="U1041_001280"
     CDS             10967..11680
                     /locus_tag="U1041_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HEM4768390.1"
                     /translation="MFSLGTIINTVAIALAGVLGSWFGHLLKERHQSGLTVASGLAVL
                     FLGISGSLEGLLTVVDGQLKSQNTMLFVLSLAFGTFLGEVLHIEGWFERLGIWLREKS
                     GNGQDSQFLDAFLTASLTVCIGAMAILGAIQDGLTGDYRLLAVKSVLDFIIIFIMTAS
                     LGKGAGFSAVPVFLFQGSVTLLACLIEPLMTDQALANLSFIGSALIFCVGVNIIWDKK
                     IRVANMLPAIVIAVIWSFF"
     gene            complement(11729..14170)
                     /gene="sntA"
                     /locus_tag="U1041_001281"
     CDS             complement(11729..14170)
                     /gene="sntA"
                     /locus_tag="U1041_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein SntA"
                     /protein_id="HEM4768391.1"
                     /translation="MNFRFSKCAVALTLALLAASNPKLAQAEEILNTTPASSTEASQA
                     VPVESDTTEEADNTESPVPATTEAENPSSSETAETSDPTSETTDTTASEARTVTPAAT
                     ETSQPVEGQTVDVRILATTDLHTNLVNYDYYQDKPVETLGLAKTAVLIEEAKKENPNV
                     VLVDNGDTIQGTPLGNYKSIVDPIEEGEQHPMYAALETLGFDVGTLGNHEFNYGLAYL
                     EKVIRTANMPLVNANVLDPTTKDFLYTPYTIVKKTFTDTEGKKVTLNVGVTGIVPPQI
                     LNWDKAYLEGKVIVRDAVEAVRDIIPTMRENGADIVLVLSHSGIGDDQYEVGEENVGY
                     QIASLSGVDAVITGHSHAEFPGTAEKPSFYAKYSGVDDTNGKINGTPVTMAGKYGDHL
                     GVIDLNLVFKDGKWTTTSSKAAIRKIDTKSSVADGRIIDLAKEAHNETINYVRQQVGE
                     TTAPINSFFALVQDDPSVQIVNNAQIWYAKQQLAGTSEANLPILSAAAPFKAGTRGDA
                     SAYTDIPAGPIAIKNVADLYLYDNVVAILKINGAQLKEWLEMSAGQFNQVDPSSTEPQ
                     NLVNTDFRTYNFDVIDGVTYQYDITQPNKYDRNGKVVNETASRVRNLQYNGQDVTADQ
                     EFIVVTNNYRANGTFPGVREASVNYLLNLENRQAIINYIIAEKVINPTADNNWTFTDS
                     IKGLDLRFLTADRAKSLVADQEGLVYLQASAENEGFGEFKFVYTEPKVVTPDEQQSDQ
                     GNTGQDIVLESGQRITLPAVNPPAPAPQHKLASPHSQASTKTLPATGEATSMLSLLGL
                     TLIGFVGAFRKKNEN"
     gene            14427..16628
                     /locus_tag="U1041_001282"
     CDS             14427..16628
                     /locus_tag="U1041_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEM4768392.1"
                     /translation="MKEINYTGEEVVALTASYLPADDVAFVEKALNYATEAHKLQFRK
                     SGEPYIVHPIQVAGILAGLKLDAVTVACGFLHDVVEDTEVTLDDMEAEFGPEVRHIVG
                     GVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILVKLADRLHNMRTLKHLRKDKQE
                     RISRETMEIYAPLAHRLGISSIKWELEDMSFRYLNEVEFYKITHMMREKRREREELVN
                     EVVDKLREYTEERHLHGQIYGRPKHIYSIYRKMHDKKKRFDELYDLTAIRCLMDTPSD
                     VYAMLGYIHELWKPMPGRFKDYIASPKANGYQSIHTTVYGPKGPIEFQIRTVEMHQVA
                     EYGVAAHWAYKRGGKATASEKELRWINNLIELQEGAGDAQTFVNSVKDDIFTERIYVF
                     TPDGAVRELPKDSVPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKTGDQVEIITSA
                     NSFGPSRDWVNLVKTHKARNKIKQFFKNQDKELSVSKGREMLQNLLQENGYVPNQYLD
                     RRHMDEVLQKTSYKTDESLFAAVGFGEISAVSVFNRLTEKERREAERAKAKAAADELV
                     NGGEVKHDNKDSLKIRHEGGVVIEGASGLLIRIAKCCNPVPGDEIVGYITKGRGVAVH
                     RVDCMNLKSQENYDVRLIDVGWEDENSTKEYMANIDIYGLNRSGLLNDVLKVLTNASK
                     NISSVNAQPTKDMKFATIHVSFGISNLATLTSLVDKIKSVPEVYSVKRTNG"
     gene            16630..17073
                     /locus_tag="U1041_001283"
     CDS             16630..17073
                     /locus_tag="U1041_001283"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEM4768393.1"
                     /translation="MKIVLQRVSQASVTIEGSIHGQIDQGLLLLVGVGPDDTQEDLDY
                     AVRKIVNMRIFSDEAGKMNKSVQDVAGKILSISQFTLFADTKKGNRPAFTGAAAPALA
                     SQLYDAFNQALSAFVPVEVGVFGADMAVSLVNDGPVTIVLDTKNR"
     gene            17136..17321
                     /locus_tag="U1041_001284"
     CDS             17136..17321
                     /locus_tag="U1041_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768394.1"
                     /translation="MKNLLTNHFFYLVVAFTLILVIYFSGIDKRWIILASFLYFIPSQ
                     ILYRRRLKERLQEDQPK"
BASE COUNT         4846 a         3588 c         4320 g         4876 t
ORIGIN      
        1 aactagctat ttcaccagat attgtagaag acttagtaac tattgaagct caagttatgt
       61 ctgagcagat tactaacttg gtggcctatg ttcaaaactt agacaagcag acatctaggc
      121 tgacagtcaa aaaaggggag caggtatatc ttttggagca tgaagagatt gtcaggctat
      181 atctagaaga taggctcttg caagtggaaa cagtagaaaa tgtctatact tccaacctac
      241 gcttgtatca ggtcaaggaa gatttaccag caaacttctt acaaatctcc cagtcggaaa
      301 tcattcacat caagcaactg gaccacctca agctgacctc caacggtctg gtcaaactgg
      361 tcatgaaaaa cggatcagtt acctactcat cccgtcgcta tctaaaagtt atcaaagaaa
      421 ggttaggact atgaaaaaat acatcttatc agctagttta ggcattacca tcggaactat
      481 tatctccatt atcacatcag ccgtcttcgg acagggaacc tattttcctc taaatccctt
      541 ttcaaccatg ggggcttact acctgagcaa ctttaatcaa gtaaccgtca tgatgatttg
      601 tgtagttatt tgggcggcaa tcggtctctt gttccagctg gcagacaaga tttttgaaca
      661 ggactggagc cttctacgaa tgactgcgac acatttttgt atcacagctt taggcttcac
      721 accgctgggc attttggctg gttggtttcc cgtgaaactt gggactctta tcttcttttg
      781 gttcctcttt atcttggtct acgcttctct ctttttccta aattatcgga aaatggagcg
      841 gcaaatcaag gacatcaacg gtcgtttgta gtataatagc actatcattt tgttggagtg
      901 ttttatgaaa attattttga cgattgtcta tagcttggga gtggtgtgga atatcctctt
      961 tcttgccgtg aatgttggca gaattcctgt catcaacttg ctttggcctg ctgtgatttt
     1021 agtggcctgt gtcatcaatt tgtacttctt atggactaga aaacaagagt cagaataggc
     1081 tcttgttttc atttgctttt cagaaataaa aactatatct agtgtaaatt ttaaattttt
     1141 atattttttt gcacaatata ttgatttttg ttttgtgaag tgctacacta atagaagtga
     1201 agaattttgg aggtttgtca gatgaatgtg caagaaaatg tcttaccgag tatagaatta
     1261 ttagttttga aacgtgatgg acggacagta tcctttgacc aggataagat tttttctgct
     1321 cttcggcggg caaaccaaga attagaacat cctgtttcag aggcaggttt aaaaattgta
     1381 ttagaagctg ttttggctga aattggtcgc cgatttgaaa aagatgttca aatttacgaa
     1441 attcaaacgg tcgttgaaca ggaattgtta aaggctcatt tatatgattt agcggagctt
     1501 tatattcaat atcgaacacg ccgtgatttt cgccgtcatc aggctaccga tattaatttt
     1561 gaaattcata agctgttgag caaggaccag tctgtggtca atgaaaatgc caataaggac
     1621 gcggatgtgt tcaatacgca acgggacctg acagcaggta ttgtcggaaa gtctatcggt
     1681 ctcaaattat tgccagctca tgtggccaac gcccatcaaa aaggcgacat ccactaccac
     1741 gacttggatt acagccctta tacaccaatg actaactgtt gtttgattga ttttaaaggg
     1801 atgttggcac agggcttcaa gataggaaat gcggatgtgg agagtcctaa gtcaatccag
     1861 acagctacgg ctcagatttc acaaatcatt gctaatgtgg catctagcca gtatggtggt
     1921 tgctcagctg accgtatcga tgaagttttg gcgccctatg cggaacttaa ctaccaaaag
     1981 catttgaaag acgccaagaa ttgggtgtta gcagacaagc aagaagaata tgcgcgtgct
     2041 aaaacgcaaa aagacatcta tgacgctatg cagtctttgg agtatgaaat taacaccctt
     2101 tttacttcca atggacaaac accctttacc tcactcggtt tcgggctagg gacatcgtgg
     2161 tttgagcgag aaattcaaaa agcgattttg aacattcgta tcaagggtct agggcgcgaa
     2221 ggtcgcacag ctatctttcc taagttgatt ttcacagtta agcgtggctt gaacttggag
     2281 ccagattctc caaactatga catcaagcaa ttggcaattg agtgtgcaac caagcgtatg
     2341 tatccagata tgttgtctta tgacaagatt gttgagttga caggttcctt caaggtgcca
     2401 atgggctgcc gctcattcct tcaaggttgg aaggatgaaa atggccagga tgtgacatct
     2461 ggtcggatga acttgggtgt cgtaaccgtc aatttgccac ggattgccat ggagtctgca
     2521 ggagatatgg ataagttctg ggaaatattt gcagaacgca tggccattgc caaggatgcc
     2581 ctggtctacc gtgtggaacg agtgaaggag gcaaccccgg ccaatgctcc aattctctat
     2641 cagtatgggg cattcggcaa acgcttggct aagacagacg cagtagatga agtctttaaa
     2701 aatcgtcgag caaccgtatc tttggggtac attggtttgt atgaagtcgc aacagtattt
     2761 tacggtggcg aatgggagac caacccagag gcaaaagatt tcacggtgga tattatcaag
     2821 aaaatgaaag ccttggttga agattggtcg gatgaatatg gttatcattt ctcagtttat
     2881 tcgacaccat ctgaaagcct gacagaccgc ttctgccgta tggatacaga gaaatttggc
     2941 attgttaagg acattacaga taaagaatat tacactaaca gttttcacta tgatgtacgc
     3001 aaaaatccaa caccgtttga aaaactggac tttgagaaaa tttatcctgc tgtaggtgcc
     3061 agcggtggat ttatacatta ctgtgaatac cctgtgctgc aacaaaatcc aaaggccttg
     3121 gaagctgttt gggactatgc ttatgaccgt gtgggctatc tggggaccaa tactccgatt
     3181 gaccattgtt acgcttgtga ttttgaaggt gattttgagc cgacggagcg tggcttcaag
     3241 tgtccaaatt gcgggaatag cgatcctaag tcggtggatg ttgttaaacg aacttgtggt
     3301 tatctaggca atccacaggc ccgtccgatg gtaaaaggcc gccacaagga aatttcggcg
     3361 cgtgtgaaac acatgaatgg gtcaagctta taagtaataa acagactatg tagagcttcc
     3421 acagttccag ttagctgtgg aagtttatta taaacaaata agagataaaa aaagaggaga
     3481 aaacaatggg aaaatatcaa ttagacgata aggggaaggc cctggtgaca cgctatcatg
     3541 agaagaattc taatgtgaag caggataaaa aagcgcgtgt gcaggaattg ctcaaacaag
     3601 caaaaaacaa gaaaaaatag tatggactat acagatatta gtattctcca taccaatgat
     3661 atgcattcct acatggagaa ttttccaaag aaggcgcaac tgattgcgga tattcgggat
     3721 ggtaatgaga aaaaggggat tccgacctac agacaggtct ccaccctcag atgtggggca
     3781 ttgtcccggg cggtgagggt tttgtggtca atggcagagc tgtcgagtca gataaggact
     3841 atcagattgt gaccaattct tttgtctgga gcggcaagga caactatgat gatttccaca
     3901 aggcagaaat tgtgcaggac ttgggactgg atatagacat catcagtgaa tttttcaaga
     3961 gacaatatgg agactaaaat ggaattaaga agaccgacta tagcggataa ggaaacgatt
     4021 ttggagatgc tggcagaatt tgaaaaagca ggctcagcta tggatggagg atttatctcc
     4081 aaagatgtgg actttgaaga ctggattttg agaaaccaag actatgaggc aggcatcaac
     4141 ctgccagaag gttttgttcc ctctattcag tatgtatcat ttgatcagac aggtcgagcc
     4201 cttggttttc tcagtctacg cctacggctc aacgatttcc tgctcaataa aggcggtcac
     4261 atcggatatt ccattcgccc gacagagcgt ggcaagggct atgccaagga tcagttgcga
     4321 cttggtttgc aggaagccgc aaccaaaaat atttccaaag tcctcgtgac ttgctcgaca
     4381 gacaatgaag ctagtcgcaa aacgattgta gcatgtggtg gtagcttaga agatatcaga
     4441 gaaggagtag agcgttactg gattggatga gaaaggaggc agtaatgcaa gagcagactt
     4501 ggaacaatcc caagccaggt gagtggaaga gtgaagaact cagtcaggga cggattatgg
     4561 actacaaggc ctttaacttt gtggacggag aaggcgtgcg gtgttccctt tatgtcagcg
     4621 gctgcctctt tcactgtcca ggctgctaca atgttgcaac ctggtctttt aaggccggca
     4681 ttccttacac caaggagctg gaagaccgca ttttagcaga cctggcccag ccctatgtgc
     4741 agggtctgac cctcttgggt ggggagccct ttctcaatac agggaccgtc cttcccctcg
     4801 tcaagcgggt gcgggatgaa ttgccagaca aggacatttg gtcctggaca ggctacacat
     4861 gggaagaatt gatgctggaa acgccagaca aattagaact gctcagccag ttggacattc
     4921 ttgtagatgg ccgctatgac aaaagcaaac gcaacctcat gttgcagttc cgaggctcct
     4981 ccaaccaacg catcattgat gtgcagcagt cattgcagga aaatcgagtg attttatggg
     5041 ataaattaca aaaatgaccc gcacagtttt catgtacggg cttatttttt tgacaaaaga
     5101 tgaccaaatc atcttctgga cacacaaaaa gccttgtact acaaggctta aggagatata
     5161 tgaaaatcct ccctgtaggg atcgaaccta cgacccacgg attaagagtc cgctgctctg
     5221 ccagctgagc taaggaaggg taaaataaaa atgctgtatt ggtaccggtt attcatgaat
     5281 tgtattgatc ccgcacgcta gaagcaggtg ggtgacgcgt ttctgactta gttgcttctg
     5341 ggtgtaccag cctgcatact gccaaaagat ctttgtctcc ctagtaatac aaaaatagtc
     5401 ggtcaacaca taggtatgaa ttcgtatacc acagcagttc ttatttctga tttaatatta
     5461 ccatattttt aaaaaaaatc aagagaaaat cggcaaaaat atgaaaacgt tatcaaattt
     5521 tatttttctg aagaaaagca ctacaattta tgatacagga cgatattgtg ttcagttcag
     5581 ttattaccta tatttctccc attccttatt gataagcgtt gtaaaatcag gaagtccctg
     5641 tgtttctctt actcacctat ttggtaaagc atttttcctg aatagaaaat attcattaga
     5701 caggttacag gagtagcacc agtccataac cacccctgaa atacagctcg tctccagttg
     5761 taggtttcca caattacttc aaattcacta tcttggtact ttttctggta ttctttcagt
     5821 ccaatacaag ttcctgaaaa atcccctgta acagtatctt cgaatacgaa aaactcgaca
     5881 tcctctttat caacctgttc aaacaggatg gttgctttat aaatctgttc agtttgatta
     5941 tcagtataat aaaacagaga atccatatgc agtatcagct gattatccag gtgttcaatc
     6001 ttcgtaattc ttgcatcatg caacgaatac ggaaagacct cgccaaaatt tcgttctatt
     6061 ttcattggaa tacctcattt taagatttct acaaacagtt tgatggtctt tggttcataa
     6121 tcaatagaaa ctagtcctac attacacatt tttcttatgc tgttttagct gcttgatttt
     6181 ttcttgggtc atgcccaagg cacgctcgta tttgccggtg tcgttggcgg tgaagtagtc
     6241 cgcagtcagt aacttgtcgg gtaggtattg ctggtccacc catttttcag gataggcatg
     6301 cggatactgg tagccgatgg catttcccag ctccttacta ccggcatagt gaccgtcccg
     6361 aagatgattt ggaatgggca gatggccgtt tttccgtaaa tcagccagag ctgcatccat
     6421 agccagatag gcagaattgg acttgggaga aagggccaag tcgactacta cattggcaat
     6481 caaaatccgt gcctctggaa atccgatttt ctgggcagct tcaagagctg tcaccgtatg
     6541 aatttgtgcc tctggattgg ccaagccgat gtcttcgtag gcgatgaccg tcaagcgacg
     6601 ggccagacta ggcaggtctt cggcctcaat caaacgagcg gcgtagtgga ggctggcatt
     6661 gacatcgcta ccccgaatag atttttgcag ggcggagaga atgtcgtagt gggcatcgcc
     6721 gttcttgtcc atgctgatgt aggacttttg caggctattt tccacggcgt ccagatcaat
     6781 gtggcggcta ccgtcgtcac tttccttggt cgaaagtaca gctagttcta gcgaattgta
     6841 ggcggcacga aggtcaccgt tggtcgcatt tgccaggaaa tccagagcct caggctcaat
     6901 ggtaataggg aagtcaaaac cacgttcgct gtctgtcaga gccagttcca aggcctgttg
     6961 gatgtggctg gtttgcaaag gctgcaattc aaaaatctgc acccgactac gaatggcggg
     7021 cagaattgag aagaagggat tttccgtcgt tgccccaatc atgatgatat tgccattttc
     7081 caaaagagga agcagaaagt cctgtttggt cttgttgagg cggtggattt catcgagcag
     7141 gaggaccaga ccgccagaaa acttggcctc ttcagcgatt tcctgcaggc gtttttggtt
     7201 gtcggtcgtg gcattaaagg ttcgaaaggc atacttggtc gtaccagcaa tggcagaagc
     7261 aatcgaggtc ttaccaatcc ctggcggacc gtagagaatc atggacgaca gcatattggc
     7321 atcaatcatg cggcggataa tctttccagg accgaccagg tgttcctgac cgatgacgtc
     7381 atcaatggat ttgggccgca tgcgaagggc gagattggct ggcataggct tcctttcagg
     7441 gcatttatgg tataatcatt atactacaat tttaagattt ggagagaaac gaagatggcg
     7501 gagttgacgg tgagtgtttt ggaagaatac ttgcgtgatc actatggaac agaggtcccc
     7561 gaacaaagtc tctttatgaa attagtggag gaaattggtg aagtggcaga gctactgaat
     7621 caacgtgcag gccgcaagat gatggatagc gaagaagaca gctcggcttg tctggcagaa
     7681 gaattagctg acgttattca ctatgctgta gccttggcag cggtgaatca actagattta
     7741 accaagtcca ttttggagaa agacaagcgg gcttccgtca aatacggtcg agaaataaat
     7801 ttattggaat ttatcgtcat ttagtttttc ttttattacg tcgttaactc gctttgccgt
     7861 acttcagtac agcctacagc tcgttgccta gtactaaaag taaactaaaa gactatatag
     7921 aaaagaggaa atagaatggc aaaacatggc tttttagatg tgctggaagc agcattggac
     7981 aaacatttta cctacgatta tgagcttaac tgggacaaga aaaaccacgc agttgagttg
     8041 gctttcatct tggaagcgca aaatgtggct gggattgaaa cggtggacga cgaaggcaat
     8101 gcgtcttctg aggatatttt cctggaggag tatgtccttt tctacaacca ggacaagtct
     8161 cgctttgacg aggaagacta cctggtcgct ctgccatttg acgccaagaa gggcttttca
     8221 gcagagtttc tgacctattt cgcaagcttt ctcaaggaca ccgctgacca aggcctagat
     8281 gacctcatgg actttttggc gaacccagaa gcccaagaat ttgcgattgc ttgggacggc
     8341 gaggcttttg aaaaaggcag agcagacttg gtggaagggg aattttaccc atatccgagg
     8401 tattgagatg gttcatgaaa tgttactggc tccaaaacct tttgaaatga tgaagtctgg
     8461 tcagaagacc attgagctac gactttacga tgagaagcgc aagcatatac aaattggaga
     8521 tcgcatccgt ttttattgta cagaaaatca gacgcaaacg atcgaggtgc aagtattaga
     8581 tcttcacata tttgataatt ttgctcagtt atacaaagaa ctggatctat tatcttgtgg
     8641 gtatacgcaa agcagtatca gagaggcgaa accagaagat atggaagttt actattcgcg
     8701 agaacaatta gaacaatatg gtgcagtggg tatagaattg agggtaatag attctatttg
     8761 acattctgtt ttctctcttg cttgactgca ggcgaaactt ttgctattat aaaaatagaa
     8821 aaggcgttga gttccagctc aacgccctga caggaccata acgatggttc agttcgttag
     8881 attaaataac cgtcagaact gtgtcaaagt ttgctgacgg ttatttttta tctcgaatag
     8941 ctaaaatgat gacgattatc aagctcagca tttcaacaag tagacttgcg aatgtgagca
     9001 tgacaatcag tccatcagct acggacaaaa gcattcctcc tttctagcag atttgctgtc
     9061 cacttccatg ggcatcacct ccgttcagaa acttggaacc accgtctcaa actttcctac
     9121 atatgtttat tcgcagtgcg attagaaaat tttcgaaaaa gtattattag ggctccatcg
     9181 cgtaacatta acttgtaaaa taggctagaa atcggtacaa taatacagtg attgacgata
     9241 gaaaagaaaa ggaaaacaaa catgaactca tggcaagaat taactattca cgttcatcgt
     9301 gatgcagaag aggtagtttc aaatctgatg attgaaacgg gcagtcaggg ggtggccatt
     9361 agcgactcag ctgactatgt ggggcaggag gaccgttttg gtgaactcta tcccgaggtg
     9421 gagcagtcgg atatgattgc gattacggct tactatcctg atactgtaga tattgaggaa
     9481 gttaaggcag acttggcgac tcgcttggcg gatttgccag gatttggctt ggaaacgggt
     9541 caggtcagct tagaaagtca ggaattggca gaggcagact gggcggacaa ctggaagaaa
     9601 tactatgagc cagcccgcat tacccacgat ttgaccattg taccgtcttg gaccgactat
     9661 gaggcgactg ctggtgagaa aatcatccgc ctggatccag gtatggcttt cggtacggga
     9721 acccacccga ccactaagat gagccttttt gctctttctc aggtcctgcg tggtggtgaa
     9781 acggtcatcg atgtcggtac aggctcaggc gttctctcaa tcgctagctc tcttcttggg
     9841 gctaaggaaa tctttgctta cgatttagat gaagtggcgg tgcgtgtagc tcaggaaaac
     9901 attgatctca atgccaatac tagcaatatt catgtcgcgg caggtgactt gcttcgtggc
     9961 attgacattg aggcagaagt catcgttgcc aacatcttgg cggatattct catccatctg
    10021 accgaggatg cctaccgtct ggtcaaggac gagggctacc taattatgag cggcatcatc
    10081 gcggacaagt gggacatggt gcgagcatct gcggaggcgg ctggcttctt ccttgagact
    10141 cacatgattc agggcgagtg gaattgctgc gtctttaaga aaacggctga tcgctcaggt
    10201 gtgattggag gctaggatgc agcagtattt tgtcaatggc agagcaccgc agggcgtgtt
    10261 ccagattagc gataaggaca ccgccaagca tatgttttct gtcatgcgct tgcaggcaga
    10321 tgatcagatt gtcctggtct ttgacgatgg tatcaaacgc ttggcgcgcg tggtagatag
    10381 ccagaaccaa tctgttgaaa tcatcgaaga attggcagac aatgttgaat tgcccgtttc
    10441 cgtgaccatt gccatgggct ttccaaaagg agataagctc gaatttgtcg cccaaaaggc
    10501 aacggaatta ggcatgacag ccctctgggc ctttccagca gactggtcag tggtcaaatg
    10561 ggacggtaaa aaactagcga aaaaggcaga gaaattagaa aaaatcgccc aaggagcagc
    10621 cgagcaaagc aaacgcaatc gcattccagc aattcgcttg tttgagaaaa aagcggattt
    10681 cctagctcag ttggcaggct ttgatcagat tattttagcc tacgaagaag ctgccaaaaa
    10741 aggcgagcag accaatttgg tgaagacctt atctggctta gaaactgggc aatcagtcct
    10801 ggtcatcgtc ggtcctgaag gtggcgtttc gcctgaggaa gttgtagctt ttgaaggagc
    10861 aggagcagtc aaaacaggcc taggtcctcg cattctccga gcggaaacag caccgcttta
    10921 tgctctttct gctattagct acgcgacgga attgttgagg tagtccatgt tttctttagg
    10981 aacgattatc aatacagtgg ccattgccct agcaggtgtg ctagggtctt ggtttggtca
    11041 tttgctgaaa gaacgccatc aatcaggttt aacggtggcg agcgggctag ctgttttatt
    11101 tttaggaatt tcaggtagtt tagaaggact gttgacagtc gttgacggtc aactcaaaag
    11161 tcagaacacc atgctctttg tgctgagtct agcctttggg acctttctgg gcgaagtcct
    11221 gcatattgaa ggctggtttg aacgactggg gatttggctc cgagaaaagt cgggcaatgg
    11281 tcaagactct cagtttttgg atgcttttct aactgcctcc ctgaccgtct gtatcggtgc
    11341 catggccata ctaggagcca tccaagatgg attgacgggt gattatcgct tgttggccgt
    11401 taagagtgtt ctggacttta tcatcatctt tatcatgacg gccagtttgg gcaagggagc
    11461 aggcttttca gcagtacccg tttttctctt tcaaggctct gtgactcttt tggcctgcct
    11521 gattgaacct ttgatgacgg atcaggccct tgccaatctc tcctttatcg gttccgccct
    11581 catcttctgt gtcggagtca atatcatctg ggacaaaaag attcgcgtgg ccaatatgct
    11641 gccggccatc gtgattgcag ttatttggtc atttttttaa tagactaaaa gagctcggtt
    11701 gcttatccga gctctttact attttacatt agttttcatt tttcttgcga aaagcaccga
    11761 caaagccaat caaagtgaga ccgagcagac taagcataga agtagcttct cctgttgcag
    11821 ggagtgtctt ggtgctcgct tgtgaatgtg gactagccaa tttatgttgt ggagcaggag
    11881 ctggtggatt taccgctgga agagtaattc gttgaccaga ttcgagtaca atatcttgac
    11941 ctgtgttacc ttgatctgac tgctgttcat ctggagtcac gacttttggt tcagtgtaga
    12001 caaacttgaa ctcgccaaat ccttcgtttt cagctgaggc ttggaggtaa accagacctt
    12061 cttggtcagc aactagagat ttcgcacgat ctgctgtcaa gaagcggagg tcgagtccct
    12121 tgatgctatc tgtaaaggtc cagttattgt ctgctgtagg gttgataact ttctcagcga
    12181 taatataatt gatgatggct tggcggtttt ctaggttgag caagtaattg acagaagctt
    12241 cgcggacccc agggaaagtg ccgtttgcac ggtagttgtt ggtcaccacg atgaattctt
    12301 gatcagctgt cacatcttgc ccattgtatt gcagattccg aactctgctg gcagtttcgt
    12361 tgactacctt accgttacga tcgtatttat ttggttgcgt aatatcgtac tgataagtta
    12421 ctccgtcaat aacgtcaaaa ttgtaagtgc ggaaatctgt gttgactagg ttttgtggct
    12481 ctgttgagct tgggtcaact tggttgaatt gccctgcgga catttccaac cattctttga
    12541 gttgggcacc gttgattttt aagatggcta caacgttgtc gtagaggtaa agatctgcta
    12601 cgttcttgat ggcgattggg ccagcaggaa tgtctgtata ggctgaagca tcgcctcgag
    12661 taccagcctt aaatggtgca gccgcagata ggattggtag attagcttct gaagtacccg
    12721 ccaactgttg tttggcatac caaatctgtg cattgttaac aatctgtaca gaaggatcat
    12781 cttggacaag ggcaaagaag ctgttgattg gagcagttgt ttcaccgact tgttggcgca
    12841 catagttgat ggtttcgtta tgggcttctt tagcaaggtc gatgatgcga ccatctgcta
    12901 cagatgattt tgtatcgatt ttacgaatag ccgctttgct agaagtagtt gtccatttgc
    12961 catctttaaa gaccagattg aggtcgatga cgccgaggtg atcaccgtat ttacccgcca
    13021 tggtgacagg agtaccgttg attttaccat ttgtatcatc tacgccagag tatttagcat
    13081 agaagcttgg tttttcggca gttcctggga attctgcgtg ggagtgacct gtgataaccg
    13141 catcaactcc tgataggctg gcgatttggt aaccgacatt ttcctcgccg acttcatatt
    13201 ggtcatcgcc gatacctgag tgggaaagga ccaaaacgat gtctgcgcca ttttctcgca
    13261 tggttgggat aatatcgcga acggcttcaa ctgcatcacg aacaatcact tttccttcta
    13321 gataagcttt gtcccagttg agaatttgag ggggaacaat ccctgtaaca ccgacattta
    13381 gtgtaacctt tttaccctcg gtgtctgtga atgtcttttt cacaatggta taaggggtgt
    13441 agagaaagtc ttttgtagtc ggatcgagga cattggcatt gactagaggc atgttggctg
    13501 tacgaattac tttttcgagg taggcaaggc cgtagttaaa ttcgtggttg ccaagtgtgc
    13561 cgacatcaaa tcccagagtc tctaaggcgg cgtacatagg atgttgttca ccttcttcaa
    13621 taggatcaac gatagacttg taatttccaa gaggagtacc ttgaatggtg tctccattat
    13681 ctaccaatac gacatttgga ttttcttttt ttgcttcttc gataagaaca gctgtttttg
    13741 ctagacccag tgtctctaca ggtttatcct ggtaatagtc atagttgacc aagttcgtat
    13801 ggaggtcagt tgttgcgaga atgcgaacat caacagtttg tccttcaaca ggctgactag
    13861 tttcagttgc agcaggagtg accgtacgtg cttctgaagc agttgtgtca gttgtctcgc
    13921 ttgtaggatc actagtttca gctgtctcgg aagagcttgg attttcagct tcggtagtgg
    13981 ctggaacagg agattctgta ttatcagctt cctctgtggt gtcagattca actggtacag
    14041 cctgacttgc ttctgttgaa gaagctggag ttgtgttgag aatctcttcg gcttgagcta
    14101 attttggatt gcttgcagct aagagagcta gtgtgagcgc tacggcacac ttactgaaac
    14161 gaaaattcat aagaatcctc cattttcttt ttgtaataat cttctacaat cattatacag
    14221 ctaaggaatg caaaaatcaa gactaattct gaacgtttgg ttgaaaaaca agtgaaaata
    14281 gtaagaaaaa taatgaaaaa aggaacgttc gctgaatctg aacttggttt ggattgtttg
    14341 taattagtag tcttatgttg ttagattcct ttttcttttc cagtgaaaat ggtaaaataa
    14401 taggaaatag ttagggagat aagtaaatga aagaaatcaa ttacactggc gaggaagttg
    14461 ttgcactgac agcaagctat cttccagctg atgatgtggc ttttgttgag aaagctttga
    14521 actatgctac tgaagctcat aaacttcaat ttcggaagtc aggcgaaccc tacattgtcc
    14581 accctatcca agtggcaggg attttggcag ggcttaagct agatgcggta accgtagctt
    14641 gcggattctt gcatgacgta gtagaagaca ctgaggtaac tctggatgat atggaggcgg
    14701 aatttggccc ggaggttcgc catattgtcg gtggtgtaac caagttgggt aaggtcgagt
    14761 acaagtctca tgaggagcag ctggctgaaa accaccgcaa catgctgatt gccatgtccc
    14821 aagatatgcg ggtcattctg gttaaactgg cagaccgtct tcacaacatg cggaccctta
    14881 agcacttgcg caaggacaag caggaacgga tttcacgtga aacaatggaa atctatgcac
    14941 cgcttgccca ccgcctgggt atttcttcga tcaagtggga attggaagac atgtctttcc
    15001 gttacctcaa tgaagttgag ttctacaaga ttacccacat gatgagggag aaacgacgtg
    15061 aacgggaaga gttggttaat gaagttgtcg acaagttaag agaatacaca gaggagcgcc
    15121 atcttcacgg tcaaatctat ggtcgtccca agcatatcta ctctatctat cggaagatgc
    15181 atgacaagaa aaagcgtttt gacgaactat atgatctgac agctattcgc tgcttgatgg
    15241 atacaccaag tgatgtctat gccatgcttg gctacatcca tgaattatgg aagccgatgc
    15301 cgggtcgttt caaggactac attgccagtc ccaaagccaa tggctaccag tccatccata
    15361 cgacagtcta tggaccaaaa ggtccaatcg agttccaaat ccggacggtg gaaatgcatc
    15421 aggttgcgga atacggggtg gcagctcact gggcctacaa gcgtggtggc aaggcaactg
    15481 ccagcgaaaa agagttgcgc tggatcaaca acctgattga actccaagaa ggggctgggg
    15541 atgcgcaaac ctttgtaaat tctgtcaagg acgatatttt tacagagcgt atttacgttt
    15601 ttacgccaga tggtgcggtg cgtgaattgc ctaaggactc cgtgcccatt gacttcgcct
    15661 atgagattca taccaaggtc ggcgagcggg cgacaggtgc caaggtcaac gggcgtatgg
    15721 tgcccctgac gaccaagctt aagacaggcg atcaggtgga aatcatcacc tctgccaact
    15781 ctttcggccc aagtcgtgac tgggtcaact tggttaaaac tcacaaggcc cgtaataaaa
    15841 tcaagcagtt cttcaagaat caggacaagg aattgtctgt ttcaaaaggg cgtgagatgc
    15901 ttcagaacct actccaagaa aatggctacg ttcccaacca atacctggac cgtcgtcaca
    15961 tggatgaggt cctgcaaaag accagctaca agaccgacga atcccttttt gcggcagttg
    16021 gttttggaga aatctctgcc gtgtccgtct ttaaccgtct gacagagaaa gaacgccgag
    16081 aagctgagcg ggctaaggca aaggctgccg cggacgaatt ggtcaacggt ggcgaagtca
    16141 aacacgacaa caaagatagt ctgaaaatcc gtcacgaagg tggcgtggtc attgaagggg
    16201 cgtcaggctt gctgatacgg attgccaaat gttgtaatcc agtacctggc gatgagattg
    16261 tcggctacat taccaagggt cgtggggttg cggttcaccg tgtggactgt atgaacctca
    16321 agagccagga aaactatgat gtccgcctga ttgatgtcgg ttgggaggat gaaaattcga
    16381 ccaaggaata catggcaaat attgatattt acggtcttaa ccgctcagga ctgctcaacg
    16441 atgtccttaa ggtcttgacc aatgccagca agaacatttc ctcggtcaat gcccagccaa
    16501 ccaaggatat gaagtttgcg accatccacg tctcctttgg tatttccaac ctggcaacct
    16561 tgaccagtct ggtggataag atcaagtctg tgccagaagt ttactcagtg aaaaggacca
    16621 acggataaga tgaaaattgt actacaacgt gtatcacagg ccagtgtgac catcgaagga
    16681 agtatccatg ggcaaattga tcaggggctc ttgctcctag tcggtgtagg gccagatgac
    16741 acacaggaag acctggacta tgctgttcgg aaaattgtca atatgcggat tttttcagat
    16801 gaggcaggca agatgaacaa gtctgttcaa gatgtggcgg gcaagatttt atccatttcc
    16861 caatttaccc tctttgcgga tacaaaaaaa ggcaatcgtc cggcctttac aggagcggca
    16921 gctcctgccc tagccagcca actctacgat gcctttaacc aggccttgtc agcctttgtg
    16981 ccggttgaag tgggcgtttt tggtgcggat atggcggtta gcctggtcaa tgatgggccg
    17041 gtgaccattg tgttagatac caaaaatcgc tagacctcta tactttttgt ctctattttg
    17101 atatactaaa agtgaaatag atgtggaggt gtgccatgaa aaacttactg accaatcatt
    17161 ttttctacct cgtggtagca tttaccttga ttttggtgat ttactttagt ggaattgaca
    17221 aacgctggat tattctggca agttttctct attttatccc ttcgcagatt ttataccgtc
    17281 gtcgccttaa agagcgacta caagaagacc agcccaagta ggctggtttt ttgatgtgta
    17341 aattggacta caattcttta ttaaatatgc tataatagtt attgcagaaa agtaaagacg
    17401 gtggctctaa tttctgaaag gtaggtggga gcggtacaga actcaacttg tagaaattga
    17461 gttcgtctta ccgcccccgc acagttgatt aggtcagatt tggagtgcga agcacgaaca
    17521 aatctgccaa tcaaccactg cgctgagatg ttgacgcgaa ttaagagaag tggaatggaa
    17581 ctttttgttc tactatgcaa atcatcaaaa tctaacagaa gggagaagct
//
LOCUS       DASFQS010000047        17604 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.047, whole genome shotgun sequence.
ACCESSION   DASFQS010000047 DASFQS010000000
VERSION     DASFQS010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17604
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.047"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(187..1449)
                     /locus_tag="U1041_001285"
     CDS             complement(187..1449)
                     /locus_tag="U1041_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEM4768395.1"
                     /translation="MNYQETRQWLSSRPASDLENGVARVSWILERLDNPQLQVPTVHF
                     VGTNGKGSTLNALQSILRSSGYTVGRFTSPSIIDFREQIVYQQEMISEEDFARIVTDL
                     QPLIEDLDQTAGLDAISEFEIVVVAMFVYFAHYQRPDILLVEAGMGGLQDATNVLAPL
                     AVVCPSIGLDHQAFLGETHAAIACHKVAVLREGVPLVYATDQPEVVAVFEEQARQLQS
                     PTYVIGREILLENSRAGFAVSSPFDRVEDLRLQMQGRHQEVNAALAVTTAQLISPHFP
                     TITNETIRQGLSQAIWPGRLELIRPNLMIDGAHNNESIAVLTQLLEDKYGDRDIEILF
                     AAINTKPVDQMLSQLSQFGPVSVTTFDDFRAVKLEDYPAGCERVQTYQEWLEQADLDN
                     PQKLYLITGSLYFITYVRRYILETMLYN"
     gene            complement(1505..2056)
                     /locus_tag="U1041_001286"
     CDS             complement(1505..2056)
                     /locus_tag="U1041_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate family ECF transporter S component"
                     /protein_id="HEM4768396.1"
                     /translation="MEKKIPKLTVQLLTAIAMTLALVMVVENYFSIRISETLQVQFTF
                     IPNTILGAIAGPVWAAVFAAISDPVFVLFSGQTVLFTWILIEAVSAFIYGWFFYRKPL
                     NTKNKADWLDVAGIVVLIQVVISFIMTPIALHFHFGTPWIALYSSRLIKAVFEIPLRI
                     VVTMLVLPSLQKIPELAKLMGIK"
     gene            complement(2371..3558)
                     /locus_tag="U1041_001287"
     CDS             complement(2371..3558)
                     /locus_tag="U1041_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000047536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEM4768397.1"
                     /translation="MSKTIAINAGSSSLKWQLYQMPEETVLAAGIIERIGLNDSISTV
                     KYDGKKESEVLDIPNHTVAVKILLEDLLKHNIIAAYEEITGIGHRVVAGGEIFKESAV
                     IGSKEVEQIEELSALAPLHNPAHVAAIRAFEEVLPEVLNVAVFDTAFHTTMPKHAYLY
                     PIPQKYYTDHKVRKYGAHGTSHYYVAHEAAKVLGRPIEELKLITAHIGNGVSITANYH
                     GQSVDTSMGFTPLAGPMMGTRSGDIDPAIIPYLIANVDELKDAADVVNMLNKQSGLFG
                     VSGFSSDMRDIESGIQAHNPDAVLAYNIFIDRIKKFIGQYLAVLNGADAIVFTAGMGE
                     NAPLMRNDVVEGLSWFGVEIDPAKNVRGANGDISTPESKVRVLVIPTDEELVIAREVE
                     RLK"
     gene            complement(3608..4561)
                     /locus_tag="U1041_001288"
     CDS             complement(3608..4561)
                     /locus_tag="U1041_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4768398.1"
                     /translation="MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQH
                     ETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQTEPMQYNHQFTPDSIGFILSFLV
                     DQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
                     ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSL
                     KYLEKDGFAILLAPNDLLTSPQSDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFV
                     LQRKAARPLAPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI"
     gene            complement(4618..5028)
                     /locus_tag="U1041_001289"
     CDS             complement(4618..5028)
                     /locus_tag="U1041_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComGG"
                     /protein_id="HEM4768399.1"
                     /translation="MLLKKKVKAGILLYALLMLAVFSLLLQFYLNRQEAESQIAQVAK
                     QEATAYIMAQMVLDKVEQDLQVEKIVTGAVVNEKEANLTTGSKQKENRGRVSFQEGQA
                     RYQLKGDQLLVTVELTSDGLYTYQFPLGLSSEGG"
     gene            complement(5006..5440)
                     /locus_tag="U1041_001290"
     CDS             complement(5006..5440)
                     /locus_tag="U1041_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEM4768400.1"
                     /translation="MLKSKIPAFTLLECLVALVILSGSLLVFESLSKLLVQEAHYQGQ
                     TVQKEWLVFSSQLRSEWDRAELVKVENGKVYVNKGEQDLAFGKSRSDDFRKTNDKGQG
                     YQPMIYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS"
     gene            complement(5427..5720)
                     /locus_tag="U1041_001291"
     CDS             complement(5427..5720)
                     /locus_tag="U1041_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002282213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type II secretory pathway, pseudopilin PulG"
                     /protein_id="HEM4768401.1"
                     /translation="MVAIRKQKNKAYILLESLVALATLVTICSLILSAVDAGRRRQAW
                     ELEQQEVLNLAQMAVQTGQDNLALNGVTVQVQRTADEIIVFHEGKEVLSVVKK"
     gene            complement(5692..6099)
                     /locus_tag="U1041_001292"
     CDS             complement(5692..6099)
                     /locus_tag="U1041_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEM4768402.1"
                     /translation="MLRRKNKAFTLFESLLTLLVVSFLAISLSGTVQTVFRSVQEEIF
                     LWEFEAIYKDSQKLAASSRQKVNLAIGGQEVTNGYQAVEVPENVEVLEEKNIKFEENG
                     GNSSLTKIRFRLSRKTVTYQLYIGSGRYKKTEE"
     gene            complement(6080..6361)
                     /locus_tag="U1041_001293"
     CDS             complement(6080..6361)
                     /locus_tag="U1041_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEM4768403.1"
                     /translation="MKKLLKLKKKAFTLVEMLVVLGIISLLLLIFVPNLSKQKAAVQE
                     KGNAAVVKVVESQMELYELEHDKEATVADLQADGYITEKQAEQYAKAKK"
     gene            complement(6363..7328)
                     /locus_tag="U1041_001294"
     CDS             complement(6363..7328)
                     /locus_tag="U1041_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEM4768404.1"
                     /translation="MARQRKVIELFNNLFASGFHLGEIVDFLKRSQLLADPYTQVLSD
                     GLLAGKPFSSLLADLRFSDAVVTQVALAEVHGNTSLSLSHIQSYLENVSKVRKKLIEV
                     ATYPVILLGFLVLIMLGLKNYLLPQLEEGNAATMLINHLPTIFLSLCGLSLVAVMSSL
                     VWFRKTNKIKVFSCLAALPFFGKLIQTYLTAYYAREWGSLIGQGLDLPQIVGLMQEQQ
                     SQLFREIGQDLEQSLSNGQSFHEHIKTYAFFKRELSLIVEYGQVKSKLGGELTVYAAE
                     CWEDFFSRVNRAMQLIQPLVFLFVALMVVLIYAAMLLPIYQNMEL"
     gene            complement(7312..8262)
                     /gene="tadA"
                     /locus_tag="U1041_001295"
     CDS             complement(7312..8262)
                     /gene="tadA"
                     /locus_tag="U1041_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
                     /protein_id="HEM4768405.1"
                     /translation="MIQEKARKLIEEAVADRVSDIYLVPRGESYQVYHRIMDEREFVH
                     DVAEEEVTAIISHFKFLAGLNVGEKRRSQQGSCDYDYGSGEISLRLSTVGDYRGKESL
                     VIRLLYDNDKELKFWFEAAERLAEEIKGRGLYLFSGPVGSGKTTLMYHLARLKFPDKQ
                     ILTIEDPVEIKQEDMLQLQLNEAIGATYDNLIKLSLRHRPDLLIIGEIRDAETARAVI
                     RASLTGATVFSTVHARSISGVYARMLELGVSPEELNNALQGIAYQRLIGGGGVVDFAK
                     GNYQNHSADKWNEQIDRLFAAGHISLRQAETEKIALGSPA"
     gene            8348..9298
                     /locus_tag="U1041_001296"
     CDS             8348..9298
                     /locus_tag="U1041_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEM4768406.1"
                     /translation="MKKLKKGDHIRIVSPSSSIERVGGFEANLAAKEKLENLGFKLSF
                     SEHYFENDMFDSAPIASRVADLEAAFADESVDAILTTIGGFNSNELLPYLDFDLIARH
                     PKIFCGYSDTTALLNAVYAKTGMETYMGPAYSSFKMDLGQDYQTEAWLKAVTQDSYDL
                     TPSPEWSSDAWYLPDAPRTFYPTEWKVYNPGQASGIAIGGNISTLNLLTGTEFAPRPD
                     KYILFLEEAEDDDYLIIARHLTALLQAYPNPQAVVFGRFPKETKMTEEILLAILDKHP
                     ILKTIPVLYDLDFAHTQPLFTIRIGGHVELDAEAFTIRFS"
     gene            complement(9443..9802)
                     /locus_tag="U1041_001297"
     CDS             complement(9443..9802)
                     /locus_tag="U1041_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HEM4768407.1"
                     /translation="MYQVIRMYGDFEPWWFLDGWEEDIVSKTTYERYEDAQKAFQKEW
                     VRLSEKFPKKQSKNGTMVAFWDESDQHWCEECDEYLQRYHSLMLVEARENLPAGFIKQ
                     PTQPRMRPCKLKQNIVI"
     gene            complement(9954..13601)
                     /gene="rpoC"
                     /locus_tag="U1041_001298"
     CDS             complement(9954..13601)
                     /gene="rpoC"
                     /locus_tag="U1041_001298"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEM4768408.1"
                     /translation="MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPERD
                     GLFDEVIFGPTKDWECSCGKYKRIRYKGITCDRCGVEVTRAKVRRERMGHIELKAPIS
                     HIWYFKGIPSRMGLTLDMSPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLR
                     EYGYGSFVAKMGAEAIQDLLKQVDLPKEIAALKEELKTASGQKRIKAVRRLDVLDAFY
                     KSGNKPEWMILNILPVIPPDLRPMVQLDGGRFAASDLNELYRRVINRNNRLARLLELN
                     APGIIVQNEKRMLQEAVDALIDNGRRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLG
                     KRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMREIVARDIAGNVKAAKRLIE
                     RGDDRIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLIDGKALRLHPLVCEAYNAD
                     FDGDQMAIHVPLSEEAQAEARILMLAAEHILNPKDGKPVVTPSQDMVLGNYYLTMEDA
                     GREGEGMVFKDADEAVMAYRNGYVHLHTRVGIATDSLDKPWKDNQKHKIMMTTVGKIL
                     FNAIMPEGLPYLQEPNNANLTEGTPDKYFLEPGSDIKAAIAELPINPPFKKKNLGNII
                     AEIFKRFRTTETSALLDRLKDLGYYHSTLAGLTVGIADIPVIDNKAEIIEESHERVEQ
                     IKKQFRRGMITDDERYAAVTDEWRSAKEKLEKRLVEKQDPKNPIVMMMDSGARGNISN
                     FSQLAGMRGLMSAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTDTALKTADSG
                     YLTRRLVDVAQDVIIREDDCGTDRGLDIRSITDGKEMIEPLEERLQGRYTKKTVKHPE
                     TGAVIIGPNQLITEDIAREIVNAGVEQVTIRSVFTCNTRHGVCRHCYGINLATGDAVE
                     VGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNSDITQGLPRVQEIFEARNPKGEAVI
                     TEVKGEVIAIEEDASTRTKKVFVKGVTGEGEYVVPFTARMKVEVGDQVARGAALTEGS
                     IQPKRLLEVRDVLAVETYLLSEVQKVYRSQGVEIGDKHIEVMVRQMLRKVRVMDPGDT
                     DLLMGTLMDITDFTDANAEVVIAGGIPATARPVLMGITKASLETNSFLSAASFQETTR
                     VLTDAAIRGKRDNLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIEDTVAEEL
                     AAEAELEAVTE"
     gene            complement(13780..17352)
                     /gene="rpoB"
                     /locus_tag="U1041_001299"
     CDS             complement(13780..17352)
                     /gene="rpoB"
                     /locus_tag="U1041_001299"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEM4768409.1"
                     /translation="MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDYG
                     LKEVFEDVLPVSNFTDTMELEFVGYELKEPKYTLEEARAHDANYSAPIYVTFRLVNKE
                     TGEIKTQEVFFGEFPIMTEMGTFIINGAERIIVSQLVRSPGVYFNDKVDKNGKVGYGS
                     TVIPNRGAWLELETDSKDIAYTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVR
                     NTIEKDIHKNPADSRTDEALKEIYERLRPGEPKTAESSRSLLTARFFDPRRYDLAPVG
                     RYKINKKLNLRTRLLNQTLAEHVINGETGEIVLEAGTVLSRDVLEKVEAQFDELNLVE
                     YIPNDNAVLLEPVLLQKFKIVAPKDPERVVTVIGNANPAENVRTVTPADILAEMSYFL
                     NLAEGLGRVDDIDHLGNRRIRAVGELLANQVRIGLTRMERNLRERMSVQDNEVLTPQQ
                     IINIRPVTAAIKEFFGSSQLSQFMDQHNPLSELSHKRRLSALGPGGLTRDRAGYEVRD
                     VHYTHYGRMCPIETPEGPNIGLINNLSSYGHLNKYGFIQTPYRKIDRATGTVTNEIVW
                     LTADEEDAYIVAQSTSPLDENNRFVDKIVMGRHQGNNQEFPADSADFMDVSPKQVVAV
                     ATACIPFLENDDSNRALMGANMQRQAVPLIDPKAPYVGTGMEYQAAHDSGAAIIAQHD
                     GKVVYADADKVEVRREDGSLDVYHISKFRRSNSGTAYNQRTLVKLGDIVEKGDFIADG
                     PSMENGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKDDVYTSVHLEEYESETRDTK
                     LGPEEITREIPNVGEDALRNLDEMGIIRIGAEVKEGDILVGKVTPKGEKDLSAEERLL
                     HAIFGDKSREVRDTSLRVPHGADGVVRDVKIFTRANGDELQSGVNMLVRVYIAQKRKI
                     KVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPSRMNIGQVMELHLG
                     MAARNLGIHIATPVFDGASSEDLWSTVKEAGMDSDAKTILYDGRTGEPFDNRVSVGVM
                     YMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQ
                     EILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRVLDEDNNE
                     VELRDLDEGEDDDIIHVDDLEKARAKAAADAAAAFAAEEAEGKE"
BASE COUNT         4846 a         4241 c         3632 g         4885 t
ORIGIN      
        1 ttgttctttt tcattatttc ctcctgttta ggctaatagg aagggcttgg ccgaagtgtc
       61 aagccctgct atactagtat agcaggcatt ttgtcaagtt ttttgcatga ttttttccag
      121 aaatataaca aaaaatgcat gtgttcattt tctaactaca tgcattttaa attcctgtgc
      181 taatttttaa ttgtacagca tcgtttccaa tatatacctt ctcacataag taatgaaata
      241 tagcgagcct gtaatcaggt agagtttttg gggattgtcc aagtccgcct gctccaacca
      301 ttcctgatag gtttggaccc gctcacaacc tgctggatag tcctccagct tcaccgcccg
      361 aaaatcgtca aaagttgtca cgctaacagg tccaaattgg ctaagctggg acaacatctg
      421 gtccacaggc ttggtattga tggctgcaaa gaggatttca atatctctgt caccatactt
      481 atcttccaag agttgtgtca ggacggcaat actttcatta ttgtgggcac cgtcaatcat
      541 gagattaggt ctaatcaact ctaagcggcc cggccagatg gcttgggaca agccctggcg
      601 gatggtttca ttggtaattg ttggaaaatg agggctgatg agctgggcag ttgtcactgc
      661 caaggctgcg ttgacctctt ggtgacggcc ctgcatctgt agcctcaaat cctcaactcg
      721 atcgaagggg cttgaaactg caaagcctgc tctgctattt tccaaaagaa tctcccgccc
      781 tatcacatag gtcggactct gaagctgacg agcctgctcc tcaaaaactg ccaccacttc
      841 tggctggtcg gtcgcataga cgagcggaac cccctcacgc aagacagcaa ccttgtgaca
      901 ggctatggct gcgtgagtct cccccaaaaa tgcctgatga tccaagccga tggacgggca
      961 aacgactgcc aagggggcaa ggacattggt cgcatcctgc aaaccgccca tgcctgcctc
     1021 caccaagaga atatcgggac gctggtagtg ggcaaagtag acaaacatag ccactactac
     1081 aatctcaaac tccgagatag catccagtcc agccgtctgg tccaagtcct caatcaaggg
     1141 ttgcaagtct gtcacaatcc tcgcaaaatc ctcctccgaa atcatctcct gctggtagac
     1201 aatctgctct cggaaatcaa taatagacgg cgaggtaaag cgaccgacgg tgtaacccga
     1261 agaccttaag attgactgca aggcgttgag ggtcgagccc ttgccatttg tacctacgaa
     1321 gtgaacggtc ggcacttgaa gctggggatt gtccaagcgt tccaaaatcc agctgacacg
     1381 tgcaacgcca ttttctaaat ctgatgcagg acgactagat agccactgac gagtttcttg
     1441 ataattcatg attccctctc tacaaaagca gcaacagggg gatgacctgt tgcttgatac
     1501 tgttttattt aatgcccatt aacttggcca attcaggtat tttttgtaaa cttggcaaga
     1561 caagcatggt cacgacaatg cgtaatggaa tttcaaaaac tgccttaatc aagcgactgc
     1621 tatacagggc aatccaaggt gttccaaaat ggaaatggag ggcaatcggt gtcatgataa
     1681 aggaaatcac aacctgaatc aagacaacaa tcccagcaac atcgagccaa tcagccttgt
     1741 tcttggtgtt tagcggtttt cgatagaaga accagccata gataaaagcc gataccgcct
     1801 caatcaaaat ccaagtgaag aggaccgttt gcccgctaaa caagacaaag actgggtctg
     1861 aaatagccgc aaagacagct gcccaaactg gacccgcaat agctcctaaa atagtattgg
     1921 gaatgaaggt aaactggacc tgcaaggttt ctgaaatccg aatggagaaa tagttctcca
     1981 caaccataac caaggcaagg gtcatcgcaa tagcagtcaa cagctgcacc gttagttttg
     2041 gaattttctt ttccataaaa aatgctcctt tttcaaaaaa tggagctgtc gtgtgtattc
     2101 gacagcggat gcaatggttt accgcgctac tctcagccag atccaatgtt cctactctag
     2161 gagacatcag atacaagcaa agatcagctt cgttatgtgg caacatccca tccacataca
     2221 cttgacgcaa accatctact ctgtgcaaat ttctttgcta gtctattgta tcacacacta
     2281 tatattttga ccacttgcta aaaactatac ctttctaaag gtataaacta taagagaaac
     2341 tggcagtctc cgactaccag ttagtttttc ttatttcaag cgttccactt cacgcgcaat
     2401 aaccaattct tcatccgttg gaataaccaa gacacgaact tttgattctg gcgttgaaat
     2461 gtcaccattc gcaccacgaa cattcttagc tgggtctatt tcgacaccga accaagacaa
     2521 gccttctact acgtcattgc gcataagcgg tgcattttca cccatacctg ccgtgaagac
     2581 aatagcatct gccccattta aaactgcaag atactgaccg ataaatttct tgatacggtc
     2641 gataaaaata ttgtaggcca acactgcatc tggattgtga gcttggatgc ctgattcaat
     2701 atcacgcata tcacttgaga agccagatac accgaacaag cctgattgtt tattcaacat
     2761 attaacaaca tccgcagcat ccttcaactc atcaacattt gcaatcaagt aaggaataat
     2821 cgctggatca atatcacctg aacgagtccc catcattgga ccagctagag gagtgaagcc
     2881 catagaagtg tcaactgatt gaccgtggta gttggcagta atagatacac cgtttccgat
     2941 gtgagccgta atcaatttta attcctcaat aggacgtccc aatacttttg ctgcctcatg
     3001 cgctacataa tagtgactag ttccgtgcgc tccatactta cgaaccttgt ggtcggtata
     3061 gtacttttgt ggaatcggat aaagataggc atgctttggc atcgtagtgt gaaaggctgt
     3121 atcaaaaaca gctacattca aaacttctgg tagtacttcc tcaaatgcac gaattgctgc
     3181 tacgtgagca gggttatgaa gcggtgccaa agcacttagc tcttcaattt gctcaacctc
     3241 ttttgatcca ataacagctg attctttgaa aatctctcca cctgcaacaa cacggtgtcc
     3301 gataccggta atttcctcgt aagcagcaat gatgttgtgc ttaagcaagt cttctaggag
     3361 aatcttaacc gcaaccgtat gattaggaat atctaaaact tcactttctt tcttcccatc
     3421 atacttaact gttgagatgg aatcgttcaa accaatgcgc tcaataatcc ctgctgctag
     3481 cactgtttct tctggcattt gataaagttg ccattttaga cttgaactac ctgcattaat
     3541 tgcaattgtt tttgacatat cttacctctt ttaaagcgtt ttcctaacta gtataacaga
     3601 ttttcactta aattgcattt tcttgcttcc aatttttgaa attgagcatg aacttctgaa
     3661 tagcttctgg ttcttgaaga ctttgcaagg gataaacaaa cggcgctaga ggtctagctg
     3721 ctttcctttg caaaacaaaa atagacttgg ccatagcagc cttcccaaag agatttggtg
     3781 gcagggcaat catggcaaca atattagctt gctcctgtaa ccaacctttc agcaaatcgc
     3841 tttgcgggct agtcaataaa tcatttggag ccaacaaaat cgcaaagcca tctttttcca
     3901 gatatttcag ggattgttcc atgagtaaat gatgggcgta ggtatgttca tttgggctgg
     3961 cgacctgata gcggctagca atctggtcat ctggatagta accaataggc aaatctccca
     4021 aaattacttg actttccttc aaaatctgcg gacgtaccgc atctccctga gcaaaagaaa
     4081 tatctgcctg catgacatca gcaatacttg ccgacaaatc aatcaagagg tcgtccactt
     4141 cgatccccaa gtaatccaat tctttctggc tggcgttgag aatggtctga gctagattgc
     4201 ctgtccccga accaatttcc agaaccgtca ccttttgagt cggcactagt tggtctacta
     4261 gaaaagatag gataaatccg atggagtctg gtgtaaactg gtgattgtac tgcataggct
     4321 ctgtctgatt ggccttgatg agcaagaatt ggtaggcacg acgccattct tccttggtta
     4381 aatctagttg tttcaaggtc tgattgttat tgacaacaag gtccgtctca tgctgattag
     4441 ctacgtaagc agcattttgc tcaatcatgg catcatagat attggtacct agctggtttt
     4501 ggatagtctg tacgttttct aatagcaggt cgtaagcctg ttcgatcttt tcaaaattca
     4561 tactcctatc ttatcaaaat ttcacagact ttgcaccaaa aaggagagcg agtcaactca
     4621 ccctccttct gatgatagcc ccaaaggaaa ttgataggta tacagaccat cacttgttaa
     4681 ctcaactgta accaatagtt ggtctccttt aagttgataa cgagcctgac cctcttgaaa
     4741 ggagaccctt cctctattct ccttctgttt agaacctgtg gttaaatttg cttccttttc
     4801 attcactacc gctcccgtaa ctattttttc tacttgcagg tcctgctcga ccttgtccaa
     4861 aaccatctgg gccatgatat aggctgtcgc ttcttgctta gctacttgag ctatttgact
     4921 ttcagcctct tggcggttta gataaaactg aagcaagaga ctaaaaaccg ccagcatcaa
     4981 aagggcatag agcaggatac ccgccttaac ttttttcttt aaaagcatag ataaaggtcc
     5041 gctcctctcc gtttttaaag ctaaagtcga tgcgcaccag ctggttttct tgggaaatag
     5101 ctgcgctgtc cacctgataa atcataggct ggtagccctg tcccttatca ttggttttcc
     5161 gaaaatcatc cgaacgtgac ttaccaaagg ccaaatcctg ttcgcctttg ttgacataga
     5221 ccttgccatt ttcaaccttg accaattcag cccggtccca ctccgaccgc aattgactag
     5281 agaagaccaa ccattccttt tgaacagtct gaccttggta atgcgcttct tggaccagca
     5341 gttttgacaa gctttcaaag accagaagac ttcctgatag gatgactaag gctaccaagc
     5401 attccaggag agtaaaagca ggaattttac tttttaacaa ctgatagaac ctcctttccc
     5461 tcgtggaaaa caataatctc atccgcagtt cgttgaacct gaactgtaac accgtttaag
     5521 gctaggttat cttgcccggt ctgaacagcc atctgtgcta gattgagaac ctcctgttgt
     5581 tccaattccc aagcctgtcg cctgcgacca gcatccaccg ctgacaaaat caagctacaa
     5641 atggtcacta gggtcgcaag ggcaaccaga ctttctagca agatataagc cttattcttc
     5701 tgttttctta tagcgaccac tccctatata taattgatac gtgactgtct ttcgactaag
     5761 ccgaaaacga attttggtca gggaagaatt tcctccattt tcttcaaatt tgatattttt
     5821 ctcctccaag acctctacat tttcgggcac ctctacagcc tgataaccat ttgtaacttc
     5881 ctgtccaccg atagcaaggt tcactttttg gcgggaactg gctgccaatt tctgactgtc
     5941 tttatagata gcctcaaatt cccagagaaa aatttcttcc tgaacagacc gaaagaccgt
     6001 ttgtactgtt cccgacaggc tgattgccag aaaactgaca accaacaagg tcagcaggct
     6061 ttcaaatagg gtaaaagcct tattttttcg ccttagcata ctgctccgct tgtttttcag
     6121 taatatagcc atccgcttgc aagtctgcca ccgttgcttc cttgtcatgt tccaattcat
     6181 agagttccat ctggctctct actactttga caacggcagc atttcctttc tcttgaacag
     6241 ctgctttttg cttgctcaaa tttggcacaa aaatgagcaa gagcaggcta ataataccca
     6301 aaacaactaa catttccacc agagtgaaag ctttcttttt taatttcaac aattttttca
     6361 ttttataact ccatattttg ataaatcggc agcaacatgg ctgcgtagat gagaacgacc
     6421 attaaggcca caaagagaaa gaccagcggt tgaatcagct gcatggctct attgacccga
     6481 gagaaaaaat cctcccaaca ctcggctgca taaactgtca actcgccacc caacttggac
     6541 ttgacctgac catactcgac aatcaaactc aactcccgct taaaaaaggc gtaggtctta
     6601 atgtgttcgt gaaagctctg accattggaa agcgactgct ccaggtcctg gccaatctcc
     6661 cgaaagagct gcgactgctg ctcctgcatc aagcccacaa tctgcggcag gtccaagcct
     6721 tgcccaatca aactccccca ctccctggcg taataggccg tcaggtaggt ttggatgagt
     6781 tttccgaaaa atggcagagc tgctaagcag gaaaagacct tgattttgtt ggttttgcga
     6841 aaccaaacca gactagacat gacagccact aaactcagac cacaaaggga caagaagata
     6901 gtcggcagat gattaattag catagtcgct gcattacctt cctccaactg gggcaaaaga
     6961 tagtttttca agcccagcat aatcaaaaca agaaagccta gcaagataac tggataggtc
     7021 gccacctcaa tcagcttttt acgaaccttg ctgacatttt ccagatagga ctggatatgg
     7081 ctcaaactca ggctggtatt accatgaact tctgccaaag ccacctgtgt gaccaccgca
     7141 tctgaaaacc gcaaatctgc cagcaaactt gaaaaaggtt tgcctgcaag aagaccatcg
     7201 gataaaactt gtgtatatgg gtctgccaaa agctgactac gcttaagaaa atcgacaatc
     7261 tctcccagat gaaaaccact ggcaaagaga ttattaaaca gttcaatgac cttacgctgg
     7321 cgagccaagg gcaatttttt ctgtttctgc ctgccgaaga ctgatatgtc ctgctgcaaa
     7381 aaggcgatca atttgttcat tccacttgtc tgcggaatgg ttttggtaat ttccctttgc
     7441 aaaatccact acacctcctc ccccaatcaa gcgttgatag gcaatccctt gaagggcatt
     7501 gtttagctcc tcagggctga cacctagttc taacatacgg gcatagacac ctgaaataga
     7561 ccttgcgtga actgttgaga aaacggtagc tccggtcagg ctggccctga tgaccgcccg
     7621 tgccgtttcc gcatcccgaa tctcaccgat gatgagcaag tctggccgat gacgcaggga
     7681 taattttatc aaattgtcgt aggtggctcc gatggcttca ttgagctgga gttgcagcat
     7741 gtcctcctgc ttgatttcaa caggatcctc gatggtcaaa atctgcttgt ctgggaattt
     7801 cagcctggca agatgataca tgagcgtggt cttgccagag ccgactggac ccgaaaaaag
     7861 atagagccct cgtcccttga tttcttctgc aagcctctcg gccgcctcaa accagaactt
     7921 aagttccttg tcattgtcgt aaagcagacg gataaccaga ctttccttgc cacgataatc
     7981 tccgacagtt gataagcgaa gtgaaatctc tccgctacca taatcatagt cacaggaacc
     8041 ctgctgacta cggcgttttt caccaacatt taaacctgct aaaaacttga aatggctgat
     8101 gatggctgtt acttcctcct cagccacgtc gtgcacaaac tcccgttcat ccatgatgcg
     8161 atgataaact tgatagcttt ccccgcgagg aaccagataa atatcactga ccctatccgc
     8221 caccgcctct tcaatcaact ttcttgcttt ttcttgaatc ataaaacctc ctcaccctat
     8281 ctattcgcaa ggaaacttga ttttccatac ttttttgtta aaataataaa aaagcttgga
     8341 ggttcctatg aaaaaattaa aaaaaggcga ccatattcgc attgtcagcc cgtcatcttc
     8401 tatcgaaaga gttggtggtt ttgaggccaa tcttgccgcc aaggaaaaac tagaaaatct
     8461 gggattcaaa ctctcctttt cagaacatta ttttgaaaat gatatgttcg attcggctcc
     8521 gattgccagt cgtgttgcgg acttggaagc cgcttttgcg gatgagtcag tcgatgccat
     8581 tctgacaacc attggcggtt tcaactctaa cgaactgttg ccctatctgg attttgacct
     8641 gattgcccgt catccgaaaa ttttctgtgg ctattcagac acgactgccc tgctcaatgc
     8701 cgtctatgcc aagacaggta tggaaaccta catgggtcct gcctattcaa gtttcaaaat
     8761 ggatttgggg caagactatc aaacagaagc ctggctcaag gctgtgacac aagactccta
     8821 tgatctgaca ccgagtcctg aatggtctag cgatgcttgg tacctaccag acgcccctcg
     8881 caccttttac ccaacagagt ggaaagtata caatccaggc caggcctctg gtattgccat
     8941 cggcggaaac atctcaaccc tcaacctgct gactgggaca gagttcgcac ccagaccgga
     9001 caagtatata ctgtttctgg aggaggcgga agatgatgat tacctgatta tcgctcgtca
     9061 tttaacagcc cttttgcaag cctatcccaa tccgcaagcg gtcgtcttcg gtcgctttcc
     9121 aaaggaaacc aaaatgaccg aggagatttt gttagcgatt ttggacaagc accctattct
     9181 taaaaccatc cctgttctct acgatttgga ctttgcccat acccagcccc tctttaccat
     9241 tcggattggc gggcatgttg aacttgatgc ggaagcattt actatcagat ttagctaaaa
     9301 aggattgacc cgcaaaggtc aatccttttt tattattcat ttacgcaatt atagtcgaat
     9361 gaattagctt tcagacaagg aactgaggtg caggctgtac tagagtacgg caagccgaaa
     9421 gtgacgatgt atcaaagtta attcaaatga ctatattttg ttttaatttg caggggcgca
     9481 tacgaggttg cgtaggttgc ttaataaaac cagccggtaa attttctctc gcttctacca
     9541 acatcaacga atgataccgt tgtagatatt catcacattc ctcacaccaa tgctggtctg
     9601 attcatccca aaaagccacc attgtgccat ttttactctg ctttttaggg aacttttctg
     9661 acaatcgtac ccactccttc tgaaaagctt tttgtgcatc ctcataacgt tcataggtcg
     9721 tcttactgac tatatcttct tcccaaccat ctaaaaacca ccagggttca aaatctccat
     9781 acattctaat aacttgatac ataacacata cttccttttt cgtacacatt atatcgaaat
     9841 catctgattt aagaaaacat tctgcttgtt aattccttat caagtaatgt atgcgcttca
     9901 tttccgaata tcaaaaagca catccctaga aaagagagat gtgccatctt aatttattca
     9961 gttacagctt caagctctgc ttctgctgca agctcttctg ctactgtgtc ttctatgatt
    10021 tcaacctcat tgatggcttg tggttcaaga ttacggtagc gggccatacc tgtacctgct
    10081 gggataatct taccgataat aacgttctct ttaagaccga gaaggttgtc acgtttacca
    10141 cgaatagcag catctgtaag gacacgagtt gtttcctgga aagatgcggc agacaagaat
    10201 gagttggttt caagggaagc cttagtgata cccataagaa ctggacgagc tgttgccgga
    10261 ataccaccag cgataaccac ttcagcattg gcatctgtaa aatctgtgat atccatgagg
    10321 gtacccatga gaagatctgt gtcacctgga tccatgacac gaactttacg aagcatttga
    10381 cgaaccatta cctcaatgtg cttgtcgccg atttctacac cctggctacg gtaaactttt
    10441 tgaacttcag aaagaagata agtttcaacc gccaagacat cacggacttc gagcaagcgt
    10501 tttggttgga tagaaccttc ggtcaaggct gctccacgcg caacttggtc accaacttca
    10561 accttcatac gggctgtaaa tggaaccaca tattcgcctt cgccagttac acccttaaca
    10621 aagactttct tggtacgagt agaggcatct tcttcaatgg cgataacttc acctttgacc
    10681 tcagtgataa ccgcttcccc tttcggatta cgggcttcaa agatctcttg gacacgagga
    10741 agaccctgcg taatatcgct gtttgaggct acaccacccg tgtggaaggt acgcattgta
    10801 agctgtgtac caggctcacc gatagattgg gctgcaatcg taccaactgc ttcacccact
    10861 tcaaccgcat cacctgttgc caagttgata ccgtaacaat gacggcagac accgtgacga
    10921 gtgttacatg taaatacgct acggatggtt acttgttcaa cacctgcatt gacaatttca
    10981 cgggcaatat cttcggtaat caattggttt ggaccaatga taacggcacc tgtttcagga
    11041 tgtttaacag ttttcttagt gtaacgacct tgcaaacgct cttcaagtgg ctcgatcatt
    11101 tccttgccat ctgtgatcga acggatgtca agaccacggt cagttccaca gtcgtcttca
    11161 cggataataa cgtcttgggc aacgtcaacc aaacgacgag tcaagtaacc tgagtcagct
    11221 gtcttcaagg ccgtatccgt cataccctta cgggcaccgt gagtggagaa gaacatctcg
    11281 agtactgaaa gaccttcacg gaagttagac aagattggca attccatgat acgtccgttc
    11341 ggagctgaca tcagaccacg cataccggcc aactgggaga agttggagat gttaccacgg
    11401 gcaccagagt ccatcatcat aacgattggg ttcttcggat cttgtttttc aaccaagcgt
    11461 ttttccaatt tttccttagc ggaacgccac tcgtcggtaa ctgctgcgta gcgctcgtcg
    11521 tcggtaatca taccacgacg gaattgtttc ttgatttgtt ctacacgttc gtgagattct
    11581 tcaatgattt cagccttgtt gtcgatgact gggatatcgg caatacctac tgtcaaacca
    11641 gcaagtgttg agtgatagta acccaagtct ttcaaacggt caaggagggc tgatgtttca
    11701 gttgtacgga aacgcttgaa gatttcagcg atgatgttac cgagattttt cttcttgaat
    11761 ggtgggttga ttggcaattc tgcaatagca gccttgatat ccgaacctgg ctccaagaag
    11821 tatttgtcag gagttccctc tgtcaagttg gcattgtttg gctcttgcag gtaaggaagg
    11881 ccttctggca taatcgcgtt gaacaagatt tttccgacag ttgtcatcat aatcttgtgt
    11941 ttttgattgt ctttccaagg cttatcgagg ctatctgttg caataccaac acgagtatgc
    12001 aagtgaacat agccattgcg gtaagccata acagcctcat ccgcatcctt gaagaccata
    12061 ccttcgcctt cgcgaccagc atcttccatg gtcaagtagt agttccccaa aaccatatcc
    12121 tgagatggtg ttacgactgg cttaccatct ttagggttaa ggatgtgttc tgcagcaagc
    12181 atgaggatac gagcttctgc ctgagcttct tctgacaatg gaacgtgaat cgccatctgg
    12241 tcaccgtcaa agtcggcgtt gtaggcttca cagacaagtg ggtgcaagcg aagagcctta
    12301 ccgtcgatta gaactggctc aaaagcctgg atacccaaac ggtgaagggt cggtgcgcgg
    12361 ttcaagagaa ctgggtgttc tttgatcact tcttccaaga tgtcccaaat acgatcatcc
    12421 ccacgttcaa tcaaacgttt tgcagctttt acgtttccag caatatcacg ggcaacgatt
    12481 tcgcgcatga caaacggttt aaagagctcg attgccattt cacgaggcac accacattgg
    12541 tacattttaa gtgttggacc aacggcgata acggaacgtc ctgagaagtc aacacgctta
    12601 ccaagcaagt tttgacggaa acgtccttgc ttacctttaa gcatgtggct gagtgattta
    12661 agtggacggc tacctggtcc tgtaattgga cgaccacggc gaccgttgtc aatcaaagca
    12721 tccacagctt cttggagcat acgtttttcg ttttgtacga tgatacctgg agcattcaat
    12781 tccaagagac gagccaaacg gttgttacgg ttgataacac ggcggtagag ttcgttcaag
    12841 tcagacgccg caaaacggcc accatccaac tgaaccatcg gacgcaaatc tggtggaata
    12901 actggaagga tgttgagaat catccactca ggcttgttac cagatttgta gaatgcatcc
    12961 aatacatcca agcgacgaac tgctttaatg cgtttttgac cagaagctgt tttcaattct
    13021 tctttcaaag ctgcgatttc ttttggaaga tcgacttgtt tcaagaggtc ttggatcgct
    13081 tctgcaccca ttttggcaac aaatgaacca taaccatatt cacgcaaacg ctcacgatat
    13141 tcacgctctg tcatgataga cttgtgctca agcggtgtat cttttggatc gatgaccaca
    13201 taagctgcga agtagataac ttcctcaagc gcacgtgggc tcatatccaa ggtcaagccc
    13261 atacggcttg gaatgccttt gaaataccaa atatgtgaaa ttggtgcttt caactcaatg
    13321 tgtcccatac gctcacgacg gactttggca cgagttactt ccacaccaca gcggtcacaa
    13381 gtgatccctt tataacggat acgcttgtat ttaccacatg aacactccca gtcttttgtt
    13441 ggaccaaaga tgacttcgtc aaagagtcca tcacgttctg gtttaagtgt acgatagttg
    13501 attgtttcag gttttttaac ctcaccgtaa gaccatgaac gaaccttact tggtgaagct
    13561 aacgtgattt gcatactttt aaatcgattt acgtcaacca ctaataatcc ctttcttttc
    13621 ttgtgagagg ttggttttcc agacctcaaa ttcttgaaca ataatcagca gaatggatag
    13681 ctgataagct atttttctat aaaatcagac ggtggaagac cgttggtcct tatctctttc
    13741 agttctgagg tttggaccaa cttgttccat ccattctaat tattctttgc cttctgcttc
    13801 ttctgctgca aaggctgcgg ctgcgtcagc tgcggctttt gcacgtgctt tttcaagatc
    13861 atctacgtgg atgatgtcat catcttcacc ttcatcaagg tcacgcaatt ctacttcatt
    13921 attgtcttca tcaaggacac gcatatccaa accaagtgat tgcaattctt tgacaagaac
    13981 gcggaaggat tctggaacac ctggttttgg aattggttta cctttggtga tggcttcata
    14041 ggctttcaga cggcctgtca catcatctga cttataagtc aagatttctt gaaggacgtt
    14101 tgaagcaccg taggcttcaa gggcccaaac ctccatctca ccgaaacgct gaccaccaaa
    14161 ctgagcctta cctccgagtg gctgttgggt aacgagtgag tatggtccga ctgaacgggc
    14221 gtgaagctta tcatcaacca tgtggtgaag cttgatcatg tacatgacac cgacagacac
    14281 acggttatca aatggctcac ctgtacgtcc atcgtaaaga atggtcttgg catctgaatc
    14341 catacctgct tctttaacag ttgaccagag gtcttctgaa cttgcaccat cgaaaactgg
    14401 tgttgcaata tggataccca agttgcgagc cgccataccc aagtgaagtt ccataacctg
    14461 accgatgttc atacgtgatg gcaccccgag tgggttcaac atgatgtcaa ctggtgttcc
    14521 gtctggaaga tatggcatat cctcaacagg tacaatacgt gaaacgacac ccttgtttcc
    14581 gtgacgaccg gccatcttat ctccgacctt gatcttacgt ttttgagcga tgtaaacacg
    14641 aaccagcatg ttgacacctg attgcaattc atcaccgttg gcacgagtaa agattttcac
    14701 atcacgaacg acaccatcgg caccgtgagg tacacgaaga gatgtatcac gtacttcacg
    14761 tgacttatca ccgaagatcg cgtgcaagag gcgctcttca gcagaaagat ctttttcacc
    14821 ttttggtgtg actttaccaa caagaatgtc gccctcttta acttcggcac caatacggat
    14881 aatccccatt tcgtccaagt tgcgaagggc atcttcacca acgtttggaa tttcgcgagt
    14941 gatttcttca gggcctaact tagtatcacg tgtttctgat tcgtattctt ccaagtgaac
    15001 agatgtatag acatcatctt tcacaaggcg ttcagacatg ataaccgcat cctcgaagtt
    15061 gtaaccttcc caagtcatgt aggcaacgat agggttttga ccaagagcca tttccccatt
    15121 ttccatagaa ggtccatctg cgatgaagtc gcctttttct acgatgtcgc ccaattttac
    15181 aagagtacgt tggttgtagg cagtaccaga gtttgaacga cggaatttag aaatgtggta
    15241 gacatcaagc gatccatctt cacgacgcac ttctaccttg tccgcatctg cgtaaacaac
    15301 cttaccatcg tgttgagcga taattgccgc acctgagtcg tgggcagcct ggtattccat
    15361 accagtacca acgtaaggtg cttttggatc aatcaatggt acagcctgac gttgcatgtt
    15421 ggcacccatg agggcacggt tggagtcatc gttttccaag aaaggaatac atgctgtcgc
    15481 aacagcaact acctgcttag gagaaacatc catgaaatct gctgaatctg ctgggaactc
    15541 ttggttgtta ccttggtgac gtcccataac aatcttatca acgaaacggt tgttttcatc
    15601 aagtggcgat gttgattgtg ctacgatgta ggcatcttct tcatccgctg tcaaccaaac
    15661 aatttcgttt gtaactgtac cagttgcacg gtcaatcttg cggtatggtg tttggatgaa
    15721 accatacttg ttgaggtgac cataagaaga caggttgttg atcaaaccga tgtttggtcc
    15781 ctcaggcgtt tcaatcggac acatacgacc atagtgagtg tagtgaacgt ctcgaacctc
    15841 ataaccagca cggtcacgag tcaaaccacc aggtcccaag gctgacaaac ggcgtttgtg
    15901 agacaactca gaaagtgggt tgtgttggtc catgaactgt gacaactgag atgaaccaaa
    15961 gaattcttta attgcagctg ttacagggcg gatattgatg atttgttgtg gcgtcaatac
    16021 ttcattgtcc tgaacagaca tacgctcacg caagttacgt tccatacgag tcaaaccgat
    16081 acgtacttgg ttagcaagca attcaccaac ggcacgtata cgacggttac ccaagtggtc
    16141 aatatcatct acacgaccaa gaccctcagc caagttgagg aagtagctca tttcagccaa
    16201 gatgtccgca ggtgttactg tacgtacgtt ttctgcagga ttagcattac caatcaccgt
    16261 cacaacacgt tctggatcct taggagctac aatcttgaat ttctgcaaaa gaactggctc
    16321 aagaagaaca gcgttgtcat ttggaatata ttctaccaaa ttgagctcat cgaattgtgc
    16381 ttctactttt tcaagcacat cacgactcaa tacagtacca gcttccaaga caatttcacc
    16441 tgtctcaccg ttaatcacat gctcagcaag tgtttggttg agcaaacgag tacggaggtt
    16501 gagtttttta ttaatcttgt aacgaccaac aggtgccaaa tcgtaacgac gtgggtcaaa
    16561 gaaacgagct gtcaaaaggc tacgagagct ttcagctgtc tttggttcac ctggacgaag
    16621 acgctcatag atttccttga gggcttcatc tgtacgagaa tccgctggat ttttatgaat
    16681 atctttctca atagtgttgc gcaccaattc gctatcaccg aagatgtcaa atatttcatc
    16741 atcgcctgag aaaccaagtg cacgtacaag cgttgtaaat ggaattttac gcgtacggtc
    16801 gatacgagtg taggcaatat cttttgagtc cgtttctaat tccaaccatg ctccacggtt
    16861 aggaataacc gttgaaccat agccaacttt accgttctta tcaactttat cgttgaaata
    16921 aacacctggt gaacgaacta actgagaaac gatgatacgc tctgcaccat tgatgatgaa
    16981 ggtacccatt tcagtcatga ttggaaactc accaaagaag acttcttgag tcttgatctc
    17041 gccagtttct ttattcacca gacggaaagt cacataaatt ggagctgagt agttcgcatc
    17101 atgcgcacgc gcctcttcca atgtgtattt aggctctttc aattcataac caacgaattc
    17161 caattccatg gtatccgtaa agtttgaaac tggaagtaca tcttcaaaga cttctttcaa
    17221 accataatct aaaaagtctt ggaaagagtc cgtttggatt tcaatcaaat ttggtaaatc
    17281 aagaacttcc ttgattcttg aaaaactacg acgggtacgg tgcttaccgt actgaacttc
    17341 atgtcctgcc aaaagttttc tcctttgtaa taagatacta agccgtaaac aactcaaaga
    17401 aaaataggaa acacgacgac ggaggcaagc ctcctaggag ctgtttatct tttttcacag
    17461 agttgtaggc gagttcaatt aaaagatacg agaccgtgaa aaccaaagtg aaaatagaag
    17521 agtaacgccg tgtcaccaga cacaaggagc tctatctttt tcacacaggt tttaggtcga
    17581 gttcaattaa agatacgagg gcgt
//
LOCUS       DASFQS010000048        17338 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.048, whole genome shotgun sequence.
ACCESSION   DASFQS010000048 DASFQS010000000
VERSION     DASFQS010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17338
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.048"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            100..624
                     /locus_tag="U1041_001300"
     CDS             100..624
                     /locus_tag="U1041_001300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768410.1"
                     /translation="MKKITFLAVTALSVLTLAACSTTEPSKKETTDTSSSVAQSSSEQ
                     ATDTSYKVGDTIVFKDVAEITITNIAWTDERNTVSDIVANKVLLVTYNVTNLTDEDYV
                     VGEDMDLYINNKVTESYPVGTILETIAPGRSIEGATTAFAVNEEGTAELEVEPGFQFN
                     TDIKPAIVKFDLPQ"
     gene            734..1432
                     /gene="dapD"
                     /locus_tag="U1041_001301"
     CDS             734..1432
                     /gene="dapD"
                     /locus_tag="U1041_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HEM4768411.1"
                     /translation="MTAQKMTAQEIIAFIGNAVKKTTVKVTFEGELAGPVPAEVTKLG
                     NVLFGDWKNVEPLLANLTENVDYVVEQDGRNSAVPLLDKRNINARIEPGAIIRDQVTI
                     GDNAVIMMGAVINIGAEIGPGTMIDMGAILGGRATVGKNSHIGAGAVLAGVIEPASAE
                     PVRVGDNVLVGANAVVIEGVQIGSGSVVAAGAIVTQDVPENVVVAGVPARIIKEIDAQ
                     TQQKTALEEALRTL"
     gene            1442..2569
                     /locus_tag="U1041_001302"
     CDS             1442..2569
                     /locus_tag="U1041_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006151341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyldiaminopimelate deacetylase"
                     /protein_id="HEM4768412.1"
                     /translation="MLDLIATRRALHQIPELGMEEFKTHAFLMETIEGLLQDCTFAQV
                     RTWKTGILVYLTGSAPEKTIGWRADIDGLPIVEETGLDFKSLHPDRMHACGHDFHMTI
                     ALGLLEKMAEQQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLK
                     VGQMATNRATLFAGTCEVKIRFTGKGGHAAFPHTANDALVAASYFVTQVQSVVSRNVD
                     PIEGAVVTFGSMHAGTTNNVIAETAFLHGTIRALTQSMSLLVQKRVREVAEGIALSFG
                     VDLEIELNPSGYLPVENNPQLADELMTYFDGVDGVEMIDCPPAMTGEDFGYLLNKVPG
                     VMFWLGVDTPYPLHNPRLSPKEEVLPFAVEKLSDFLKMKAR"
     gene            2610..3152
                     /locus_tag="U1041_001303"
     CDS             2610..3152
                     /locus_tag="U1041_001303"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEM4768413.1"
                     /translation="MDKKSIRQEVLQSLKDLTSSQRARWSQQLTEHLLASDTYQGAKS
                     LGTYLSMPHEFDTSYLIEQAQKDGKQIFIPKTYSQGRMDFVEYNPDDLVKSRFGVWEP
                     GTYSQPVDKSVVKLIHVPGLAWNQAGFRVGYGGGFYDRYLADYQGETVSTLAEFQVYD
                     FEPDVFDIPVKELLIFEELF"
     gene            3136..3813
                     /locus_tag="U1041_001304"
     CDS             3136..3813
                     /locus_tag="U1041_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEM4768414.1"
                     /translation="MKNFFDKRYPVTNGLLAVTALVFLLIQVFRFGQTTAAYTIYEFG
                     GMYGQVVRYNPIQLWRLISPIFVHIGWEHFLFNSITLLGLGYQLEGLFGSRRFFLLYI
                     LSGIMGNLFVLFFTPDVVGAGASTSLFGLFAAMALLRKFSRSPYLQVLGQRYMVLLGL
                     NLVLGLFNPTISMAGHIGGAVGGCLVVIFLPPLVEKDLFTGKQIFFSFIGYVGLIALL
                     LGIFYVT"
     gene            complement(3829..4728)
                     /gene="galU"
                     /locus_tag="U1041_001305"
     CDS             complement(3829..4728)
                     /gene="galU"
                     /locus_tag="U1041_001305"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEM4768415.1"
                     /translation="MKKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEE
                     ALRSGIEDILVVTGKSKRSIEDHFDSNFELEYNLKEKGKNDLLKLVDETTGIRLHFIR
                     QSHPRGLGDAVLQAKAFVGNEPFVVMLGDDLMDITDTKAVPLTKQLMNDYEKTHASTI
                     AVMPVPHEEVSAYGVIAPQGEGVNGLYSVETFVEKPKPEDAPSDLAIIGRYLLTPEIF
                     EILENQKPGAGNEIQLTDAIDTLNKTQRVFAREFKGSRYDVGDKFGFMKTSIDYALQH
                     PQVKDDLKQYLIDLGKKLDTKKN"
     gene            complement(4773..5789)
                     /locus_tag="U1041_001306"
     CDS             complement(4773..5789)
                     /locus_tag="U1041_001306"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEM4768416.1"
                     /translation="MEKQTIAVLGPGSWGTALAQVLNDNGHSVRIWGNIPEQIDEINE
                     QHTNTRYFKDIVLDEKIKGYKDLAETLDGVDAVLFVVPTKVTRLVAKQVAQALKHKVV
                     VMHASKGLEPDSHKRLSEVLEEEIPADLRSEIVVVSGPSHAEETIVRDLTLISAASKD
                     LETATYVQNLFSNRYFRLYTNNDVVGVETAGALKNIIAVGAGALHGLGFGDNAKAAII
                     ARGLTEITRLGVAMGANPLTYSGLSGVGDLIVTGTSVHSRNWRAGDLLGKGEKLEDIE
                     ANMGMVIEGISTTKAAYELAQELGVYMPITQAIYKVIYQGAGIEDAIKEIMTGEFRHE
                     NEWN"
     gene            5930..6379
                     /locus_tag="U1041_001307"
     CDS             5930..6379
                     /locus_tag="U1041_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM4768417.1"
                     /translation="MGHTIADFRNLLNQIEQISETIAKEYDVEHLAGPQGWALRFIAE
                     RSDLETFVKDIEAELKISKSVASNLVKRMEKNGFIQVLPSQVDKRYKRLVLTEKGQGK
                     ICHLKAFHEEMHHSLFGGIQKEDFDLVKQVANQLKVNIQRYKEKNHV"
     gene            6372..8078
                     /locus_tag="U1041_001308"
     CDS             6372..8078
                     /locus_tag="U1041_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768418.1"
                     /translation="MFKEAILRYKWYALASVLLTSIVVATTLMQPSYLQDVLTAVLAN
                     DKDEIVRVGKLLLIIAGIGLLAGLVNTISAAKISQGVSADIREKTFRKIQSFSYANIE
                     EFNAGNLVVRMTNDVNQIQNLVMMLFTVLMRVPLLFVGAFIMAVRTMPELWWMIILMV
                     VLIVAIMAVVMGQMGPRFGKFQNLMDKMNSIAKENLRGIRVVKSFVQEKNQYKKFKDV
                     SNELLGLNLFIGYGFAILQPLMMFISYMAIFASLYLVSGMLKTNMEAVGGFTSFMSYL
                     MQIMFAIIMASFMGMQASRAAISIKRISEVLDTEPAMTFKDVADEELTGKIVFDNVSF
                     TYPHDTEPTLKNISFEIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGTVSIGGRDL
                     KEVSQNTLRDTVSIVLQKAILFSGTIADNLRQGAPGADLQRLERAAGIAQAKEFIDRL
                     DDTYESQVEERGNNFSGGQKQRMSIARGVIGEPKVLVLDDSTSALDAKSEKLVQEALN
                     HDLKGTTTVIVAQKISSVVKADKILVLDEGRLIGQGTHAELVATNDVYREIYETQKGR
                     EE"
     gene            8079..9863
                     /locus_tag="U1041_001309"
     CDS             8079..9863
                     /locus_tag="U1041_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000859866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768419.1"
                     /translation="MKTLRFFWFYFKRYKLSFAVIFLAIVTATYLQVKTPVFLGNAIA
                     EMGKIGQAYFASVQMGQSDFKPDLSDFNGVMLNLFFAYAATVVSTLIYTLLFTRIVAH
                     STNRMRKGLFGKLERLTVAFFDSHKDGDILSRFTSDLDNIQNAFNQSLTQVVTNIALY
                     IGMVIMMFRQDTRLAWVTIASTPVALIALVIIIRLSRKYTDLQQAAVSKLNAYMDEKI
                     SGQKAIIVQGVQEETIAGFLELNEEVRRTTFKGRLFGGVLFPFMNGLSLVNTAIVIFA
                     GSSIVLNDRSLETAAALGLVVTFVQYSQQYYQPIMQIAASWAELQLAFTGAHRIQEMF
                     DEPEEVRPQNAPLFTELKEGVEIKDIDFGYLPGQKVLDKVSISAPKGKMVAVVGPTGS
                     GKTTIMNLINRFYDVNSGSVAFDGRDIREYDLDSLRDKVGIVLQESVLFSGTIADNIR
                     FGDESISQEMVETAARATHIHDFIMSLPEGYETFVTDDENVFSTGQKQLISIARTLLT
                     DPQVLILDEATSNVDTVTEAKIQKAMEAIIAGRTSFVIAHRLKTILNADEIIVLKDGK
                     VIEQGNHSQLLKLNGFYAELYHNQFVFE"
     gene            complement(9952..10746)
                     /locus_tag="U1041_001310"
     CDS             complement(9952..10746)
                     /locus_tag="U1041_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEM4768420.1"
                     /translation="MSPFQEKISAAVSKKEALFDESLGRYALRSMYAGAYLTMSTAVG
                     IIGADVIASQFPSLSRFVFTFIFAIGLVFVLIFGGELATSNMMYLTTGAYYKQISWKK
                     VTQMLLYCTFFNFVGATILAWLFNQSFSYLNLSDKSFVVNAVTIKLGKSDWSNFIEGI
                     TANMFVNMAILGFMLIKEQSAKFFVIISSIFMFVFLINEHLVANFASFMLLAFNATRS
                     NVEAFNMINILRQWIVVFFGNWLGAGLFIGIAYAWLNQTKTNHIEQ"
     gene            complement(10827..12062)
                     /locus_tag="U1041_001311"
     CDS             complement(10827..12062)
                     /locus_tag="U1041_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003107773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4768421.1"
                     /translation="MKFVGIVGSNADQSYNRMLLQFIQRHFKVKFELELLEIKDVPMF
                     NQDEDQSDCFAIQYLYNKITRADGVIIATPEHNHTITPALKSTLEWLSFNLHPFENKP
                     VMIIGASYYDQGTSRAQVHLRKILDAPGVNAYTLPGNEFLLGKAKEAFDDKGNIINEG
                     TVKFLESCLDNFIKYVGVVSKLKKPKPIAPEDLDCTKPIATTITGVDPDDPDWLEKAS
                     KLVNAVEGDTYVKLDNGLLTVNQLNMFLNAMPFELTYADDNNQFLYYNNSHQEPDTML
                     GKRVLAQVGNRLSTVHGTLPPARMKNVEWVVGTLRNGNQEYVRTIVPGTPAEIINTHN
                     YQAMYYPDGSYAGINEIIFNFKPWLDWYLEATGQRLVGGSGTAAAPAHVDATSGASDA
                     GSAPATSTPTDADSGASAH"
     gene            complement(12077..12679)
                     /locus_tag="U1041_001312"
     CDS             complement(12077..12679)
                     /locus_tag="U1041_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007892530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4768422.1"
                     /translation="MKLLGLVGTNSARSTNRKLLQYIEQHFADKADIELVEIKELPIF
                     NKPANRELPEIVKELVAKIEAADGVIIGTPEYDHSIPAVLMNALAWVSYGVYPLLNKP
                     VMITGASYGTLGSSRAQLQLRQILNAPELKATVLPDEFLLSHSLQAFDANGELIDLET
                     SQKLDAIFDDFRLFVTMTGKLSNAKKLLQKEAENFDWENL"
     gene            12806..13165
                     /locus_tag="U1041_001313"
     CDS             12806..13165
                     /locus_tag="U1041_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEM4768423.1"
                     /translation="MQRIFYLVFGFVSLVVGVIGIVLPIVPTTPLLLLAGFCFARSSK
                     RFEKWLRNTKIYQFYVADYVETKSISRKRKKQIIWQIYLLMAISIWLAPILLVKMGLG
                     LLTIFITYYLFWVIPEK"
     gene            13715..13894
                     /locus_tag="U1041_001314"
     CDS             13715..13894
                     /locus_tag="U1041_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768424.1"
                     /translation="MSPQLEEEFTFPRSVYLRKVDQDLWLRAARFDDEYAFPLTTLFA
                     FVTKNANESAVGSEP"
     gene            13913..14899
                     /locus_tag="U1041_001315"
     CDS             13913..14899
                     /locus_tag="U1041_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HEM4768425.1"
                     /translation="MKELQFLIYRAENDQEKASVIVSDETIWASQKEMARLFDVGVPA
                     ISKHLKNIFEEGELDEHSVISKMETTASDGKNYLTSYYNLDAIISVGYRVNSQKATKF
                     RQWATTVLREYMIKGFAMDDERLKQGENLLEKDYFRELLERVRSIRASERRIWLQITD
                     IFAEIAIDYDANSLVTKQFYAHVQNKFHYAITGKTAAEIIYEKADHTKVNMGLVTWKH
                     SPDGRILQSDALVAKNYLNEKEIRSLERSISGYFDYLERQIEQGKTQTMQDLADSIDR
                     FLAFQDYELLEGQSQITSQTAKDKAKSEYAIFNKTQKINSDFEKLLEDLSSK"
     gene            14918..15361
                     /locus_tag="U1041_001316"
     CDS             14918..15361
                     /locus_tag="U1041_001316"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000701975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEM4768426.1"
                     /translation="MKIRGFELVSQFTDENLLPKRETAHAAGYDLKAAETVSLEPGEI
                     KLVPTGVKAYMQANEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPANEGHIFAQM
                     RNITEGTVVVEAGERIVQAVFAPFLLADGDQADGVRTGGFGSTGK"
     gene            15368..15901
                     /locus_tag="U1041_001317"
     CDS             15368..15901
                     /locus_tag="U1041_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4768427.1"
                     /translation="MQILFVRHSEPDYSMFDQHEHPRLYAGFGRDLAPLTEKGRTLAQ
                     EIASNPIFSQAQVVVASSVTRALETATYIAHAQQLPLLVEPFFHEWRPDMTGQNASQD
                     EAVLAHRLFWENGGAVPESSPVRYETAAEMRERFLQALEKYKAYDRIVIVCHGMLIRQ
                     FVPKETIAYCEILEYTL"
     gene            15914..17275
                     /gene="radA"
                     /locus_tag="U1041_001318"
     CDS             15914..17275
                     /gene="radA"
                     /locus_tag="U1041_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003027046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEM4768428.1"
                     /translation="MAKKKTTFVCQSCEYHSPKYLGRCPNCGSWSSFVEEVEVAEVKN
                     ERVSLTGEKTRPMKLNEVSSIQVARTKTNMEEFNRVLGGGVVPGSLVLIGGDPGIGKS
                     TLLLQVSTQLSTIGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSIRTEIE
                     KIKPDFLIIDSIQTIMSPDISSVQGSVSQVREVTNELMQIAKTNNIATFIVGHMTKEG
                     TLAGPRTLEHMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMQSQGLVEVLNP
                     SEVFLEERLDGATGSAIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASLI
                     MAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVALASSYKDKPTNPQECFIGE
                     IGLTGEIRRVNRIEQRINEAAKLGFTKVYAPKNSLTGIKIPKEITVIGVTTIGEVLQK
                     VFK"
BASE COUNT         4680 a         3583 c         4196 g         4879 t
ORIGIN      
        1 atgaaaatta ggaggtaaaa cttctaattt ttttgttttt ctacttgaca accgatatat
       61 atatatataa tggaattgta aaattttttg gaggattata tgaaaaaaat tacattccta
      121 gcagtaactg ccttatcggt gctaaccctt gctgcatgtt caactacaga accaagtaaa
      181 aaagaaacta ccgatacctc tagtagtgtt gcacagtcaa gctctgaaca agcaaccgat
      241 acaagctata aggtgggaga taccattgtc tttaaagatg tagcggaaat tacaattacg
      301 aatattgcat ggactgacga acggaataca gtaagtgata ttgttgctaa taaggtactt
      361 ttagtaactt ataatgtgac aaacttaact gatgaagatt acgttgtcgg tgaagatatg
      421 gacctatata tcaacaacaa agtgacagaa agttatccag ttggtaccat tctcgaaaca
      481 atcgcacctg gtcgaagtat tgagggagct acgactgctt ttgcagttaa tgaggaaggg
      541 actgcggagt tagaggttga accaggcttc cagtttaata cagacataaa accagctatt
      601 gtaaaattcg atttaccaca ataacttcgg ggaggctaac ttagcctctt tttcaatttt
      661 tttgcatttc ttcccaaatt ttcagaaaat tttgatataa tagtaaaaat attattttta
      721 gattggaaac attatgactg cacaaaaaat gactgcgcaa gaaatcattg cctttattgg
      781 taatgctgtg aaaaagacaa ctgtgaaagt aacttttgaa ggtgaattag ctgggcctgt
      841 tcctgctgag gtgacaaaac ttggcaatgt cctcttcggt gactggaaga acgttgagcc
      901 actcttggcg aacctgactg aaaatgtgga ttatgtggtg gagcaagacg gtcgcaattc
      961 agctgtgcct ttgcttgaca aacgcaacat taacgcccgt atcgagccag gtgccattat
     1021 ccgtgaccaa gtgaccatcg gcgataatgc cgttatcatg atgggggcgg taattaacat
     1081 cggtgcggaa atcggtccag gtaccatgat tgacatggga gcgattttgg gcggacgggc
     1141 gaccgttggt aaaaacagcc acatcggtgc aggtgcggtc cttgcgggtg tgattgagcc
     1201 ggcttctgct gagccagttc gagttggtga caacgtcttg gtaggtgcca atgctgttgt
     1261 catcgagggt gtgcaaatcg gtagtggctc tgtagtggcc gcaggtgcta ttgtgaccca
     1321 agacgttcct gaaaacgtag tggtagcagg tgtgccagcc cgtatcatca aggaaattga
     1381 cgctcaaacc caacaaaaaa cagccttgga agaggctttg cggacactct aagaggtagc
     1441 tatgctagat ttaattgcga cacgccgggc cctccaccag attccagagc tgggcatgga
     1501 ggagttcaag acccacgcct ttcttatgga aactattgaa ggtttacttc aagattgtac
     1561 ttttgcccaa gtccgtacct ggaagacagg aatcttggtc tatctgacgg gctctgctcc
     1621 agagaaaacg attggctggc gggcggatat tgacggtctg cctatcgtgg aggagacggg
     1681 cctggacttc aagtccctcc acccagacag gatgcacgcc tgcgggcatg atttccacat
     1741 gaccattgcc ttggggcttt tggagaaaat ggcagagcag cagccgagaa acaatcttct
     1801 cttcttgttt cagcctgcgg aagaaaatct agcaggtggc atgctgatgt atgaagcggg
     1861 agcatttggg gattggttac cagatgaatt ttatgggctc catgtccgac ctgacctaaa
     1921 agtcggtcaa atggccacca accgtgcgac cctctttgct gggacctgtg aagtcaagat
     1981 acggtttaca ggaaaggggg ggcacgcagc atttccccat accgccaatg acgccttggt
     2041 ggctgctagc tactttgtga ctcaggtgca gtcagtggtc agccgtaatg ttgacccaat
     2101 tgagggggct gtggtgacct ttggctctat gcatgcgggt acgactaata atgttattgc
     2161 tgaaacagct tttttgcacg gcaccattcg ggctttgacc cagagcatga gtcttctggt
     2221 gcaaaaacgg gtgcgggaag tggcagaggg aatcgccctg tcctttggag tggacttgga
     2281 aattgagctc aatcctagcg gttatctgcc tgtggagaac aatcctcagt tggcggatga
     2341 actcatgacc tactttgatg gtgttgacgg agtggagatg attgactgcc cacctgccat
     2401 gacgggtgag gacttcggct acctgctcaa caaggtgccg ggtgttatgt tctggctggg
     2461 tgtggatacg ccttatccgc tccacaatcc tcgccttagt cccaaggagg aagttcttcc
     2521 ctttgctgtg gaaaagttga gcgatttttt gaaaatgaaa gcaagataga ctggtttttc
     2581 cagtcttttt ctgaaagaaa ggagtttctg tggataaaaa gagcattcgg caagaggtct
     2641 tgcagagctt gaaagacctg actagtagtc agcgagcaag atggagtcag caactaacgg
     2701 aacacctcct tgcttctgat acttatcagg gcgcaaagtc gcttgggacc tacctttcca
     2761 tgccccatga gtttgatact tcttatttga ttgaacaggc tcaaaaggat ggcaagcaga
     2821 ttttcatccc taagacatat tcacaagggc gtatggattt tgtagaatat aatcctgatg
     2881 atttggtgaa atctaggttt ggagtttggg aacctgggac ttattcacaa cctgtggata
     2941 agtctgtggt taagttgatt catgtccctg gtttggcttg gaatcaagcg ggttttcgag
     3001 tgggctacgg tggtggtttt tatgatcgct acctagcaga ttatcagggg gagacggtat
     3061 cgactttggc agaatttcaa gtctatgatt tcgaaccaga tgtatttgat attccagtga
     3121 aggagttgtt gatttttgaa gaactttttt gataagcgct accctgtaac caatggcctg
     3181 ttggcggtta cggctcttgt tttcctattg atacaggtat ttcgcttcgg acagacgacg
     3241 gctgcctata cgatttatga attcggtggc atgtatggtc aagtggtgcg ttataatccg
     3301 attcagttgt ggcgcttgat ttcccctatc tttgtccaca ttggttggga acatttcttg
     3361 tttaacagca ttaccttgct tggtttgggt tatcaattag aagggctgtt tgggtcaagg
     3421 cgtttcttcc tgctgtatat cttgtctggg ataatgggca atctgtttgt tctctttttt
     3481 acgccagatg tggttggtgc aggtgcatcg acctcgctct ttggtctttt tgcggctatg
     3541 gcacttttga ggaaatttag tcgcagccct tatctacagg ttcttggtca acgctacatg
     3601 gtccttttgg gattgaactt ggtcttagga ctttttaatc caaccatcag catggcaggg
     3661 catattggag gagctgttgg aggttgtttg gtcgtgattt tccttccacc tcttgtggaa
     3721 aaagatctct ttacaggaaa acagattttt ttcagtttca ttggctatgt gggtttgatc
     3781 gctttgctac taggtatatt ttatgtgaca taaaaaaact agcgcttgct agtttttctt
     3841 tgtatctaat tttttaccaa gatcaatcaa gtattgtttc aaatcatctt ttacttgagg
     3901 gtgttggagg gcgtagtcga tagaagtttt catgaaaccg aacttatccc caacatcgta
     3961 acggctgcct ttgaattcac gagcgaacac gcgttgtgtt ttattgagtg tatcgatagc
     4021 atctgtcaat tgaatctcgt tcccggcacc tggtttttgg ttttctaaaa tctcaaagat
     4081 ttcaggagtg agtaagtagc gtccgataat agcaaggtca gaaggagcat cttctggttt
     4141 tggtttttcc acaaaggttt ccacactata gagaccgttg acaccttcac cttgtggagc
     4201 gataacaccg tatgcagaaa cttcttcatg tggaactggc ataacagcaa tggttgaagc
     4261 atgtgttttt tcatagtcgt tcatgagttg cttggtcaat gggacagctt ttgtatctgt
     4321 gatgtccatg aggtcatcgc cgagcatgac aacaaatggc tcgttcccga caaaggcttt
     4381 agcttgaaga acggcatcac caagtccacg tgggtggctt tgacggatga agtgtagtcg
     4441 aatgcctgtt gtctcatcaa caagtttcaa caaatcattt tttccttttt ctttgaggtt
     4501 gtattccaat tcaaaatttg aatcaaagtg gtcttcgata gaacgtttgg atttaccagt
     4561 gaccaccaaa atatcttcga taccagagcg aagagcttct tcaacgataa attgaatagt
     4621 tggtttatca acaattggta acatttcttt ggcaagagcc ttagtagcag gcaagaaacg
     4681 tgttcccaaa cctgctgcag ggataacggc ttttctaact tttttcataa gtatgtaatc
     4741 cttttaattt tattttttct gtttaataaa aatcaattcc attcattttc atgtcggaat
     4801 tcacccgtca tgatttcttt gatggcatct tcaatacccg caccttggta gatgaccttg
     4861 tagatggcct gagtaatagg catgtaaacg cccaattcct gtgccaattc ataggctgct
     4921 ttggtagtgg aaataccttc gataaccatg cccatattgg cttcgatatc ttcgagtttc
     4981 tctcctttgc caagcaaatc gccggctcgc cagttgcgag agtggacgga agtaccagtt
     5041 acaatcaggt caccgacacc agataaaccg ctgtaagtca agggattggc acccatggct
     5101 acaccgagtc gggtaatttc tgtcaatcca cgagcaatga tagctgcctt ggcattgtcg
     5161 ccaaatccga gtccgtgaag ggcacctgca ccaacggcga tgatgttttt caaagcacca
     5221 gctgtttcta caccgacgac atcattgttg gtatagaggc ggaagtagcg gttgctaaag
     5281 agattttgga cgtaggttgc agtttccaaa tctttcgatg cggcagaaat caaggttaaa
     5341 tcgcgaacaa tggtttcttc tgcatggctt ggtcctgaaa ccacaacgat ttctgaacgg
     5401 agatctgcag gaatttcttc ttctaagacc tctgacaagc gcttgtgact atcaggctcc
     5461 agacctttag aagcgtgcat gacaaccact ttgtgtttaa gggcttgagc aacttgtttg
     5521 gcaaccaagc gggttacttt ggttggcaca acgaagagaa cagcatccac accgtctagg
     5581 gtttctgcca aatccttgta gcctttgatt ttctcgtcta ggacgatatc tttgaagtag
     5641 cgggtattgg tgtgttgctc gttgatttca tcgatttgtt caggaatatt tccccagata
     5701 cgaacagaat gtccgttatc gttgaggacc tgtgcaagcg cagttcccca agatcctggt
     5761 cctaggactg caatagtttg tttctccata agattcccct gtgttagtat tttctctatt
     5821 ataacatagt tgcatttttt tggaaaatag cagagccaaa acttgacaat agttctcaag
     5881 aaaactataa tagttctcat gctaattaat tgattggaaa ggagctatcg tgggacatac
     5941 cattgcagat tttcggaact tgctcaatca gattgaacaa atcagtgaaa ccattgcaaa
     6001 agaatacgat gtggaacact tggctggtcc acagggctgg gccttgcgtt tcattgcgga
     6061 acggtcagac cttgaaacct ttgtcaaaga tatagaagca gaattaaaga tttccaaatc
     6121 cgttgccagc aatctggtca agcgaatgga gaaaaatggc tttatccaag tcctgccttc
     6181 tcaggttgac aaacgctaca agcggttggt tttgacagag aagggacaag ggaaaatctg
     6241 tcacctgaaa gccttccatg aagaaatgca ccattcactt tttgggggca ttcaaaaaga
     6301 ggattttgat ttggttaaac aggtggctaa tcagttaaaa gtaaatattc aacgctataa
     6361 ggagaagaat catgtttaaa gaagccattt tacgttataa atggtacgcc ttagcatcgg
     6421 tcttgctgac gtcaattgtc gtagcaacga ccttgatgca acctagctat ttgcaggatg
     6481 tcttgacagc agtcttggcc aatgacaagg atgaaattgt tcgtgtgggc aaattactgc
     6541 tgattattgc tggaattggt cttttggcag ggcttgtcaa taccatttca gcagctaaga
     6601 tttcacaagg ggtatctgca gatattcgtg agaagacctt tcggaaaatc caaagcttct
     6661 cttatgccaa tatcgaagag tttaacgcag gaaacttggt tgttcggatg actaacgatg
     6721 tcaatcaaat ccagaacctt gtcatgatgc tctttacagt gttgatgcgg gttccattgt
     6781 tgtttgttgg agcctttatc atggcggtgc ggaccatgcc agaactctgg tggatgatta
     6841 ttctcatggt ggtcttgata gtggctatta tggcggttgt catggggcag atgggaccac
     6901 gttttggaaa attccagaac ctcatggaca agatgaacag tattgctaag gaaaacctac
     6961 gtggaatccg tgtggtcaaa tcctttgttc aggagaaaaa ccagtacaag aaattcaagg
     7021 atgtatccaa cgaactcttg ggcctcaatc tctttatcgg ctacggtttt gctatcttgc
     7081 aacccttgat gatgtttatc tcctacatgg cgatttttgc atcgctttac ttggtgtctg
     7141 ggatgttgaa aaccaacatg gaagcagttg gtggctttac ttcctttatg agctacctca
     7201 tgcaaatcat gtttgccatt atcatggcta gcttcatggg tatgcaggca tctcgtgcgg
     7261 cgatttctat taagcgtatc agcgaggtgt tggatacgga gcctgctatg accttcaagg
     7321 atgtggcgga tgaagaattg actggtaaga ttgtctttga caatgttagc ttcacctacc
     7381 cacatgatac ggagccgact ttgaaaaata tctcctttga gattgagcca gggcaaatgg
     7441 ttggtgtggt tggtgcaaca ggtgcgggta aatctactct tgctcaactg attccgcgtt
     7501 tgtttgaccc gcaagaagga acggtatcca tcggtggtcg ggacttgaaa gaagtcagcc
     7561 agaacaccct gcgtgatacg gtatcgattg tcttgcaaaa ggctattctc ttctcgggaa
     7621 ccattgcaga caacctgcgt caaggggcac ctggtgctga tttgcaacgc ttggagcggg
     7681 ccgcaggtat tgcccaagca aaagaattta tcgaccgctt ggatgatacc tacgagagcc
     7741 aagtagaaga acgtggaaat aacttctctg gtggtcagaa gcagcggatg tccattgctc
     7801 gtggggtgat tggcgagcct aaggttttgg tcttggatga ctcgacttct gccctggatg
     7861 ccaagtctga gaaactggtc caagaggctc tcaaccatga tttgaagggg acaaccactg
     7921 tcatcgttgc ccagaagatt tcttctgttg tcaaagctga taagattttg gttcttgatg
     7981 aaggtcgctt gattggtcag ggaacacacg cagaattggt agcgacaaat gacgtctacc
     8041 gcgaaatcta cgaaacacag aaagggaggg aggaatagat gaagacttta cgttttttct
     8101 ggttttattt caaacgctat aaactgtcct ttgctgtgat ttttctagcc attgtgacag
     8161 cgacctactt gcaggttaag acacctgttt tccttggaaa tgccattgcg gagatgggga
     8221 aaatcgggca ggcttatttt gcttcggtgc aaatgggtca gtcagatttc aaacctgacc
     8281 tgtctgattt taatggggtt atgctcaacc ttttcttcgc ttatgcggcg acggtggtgt
     8341 cgaccttgat ttataccctg ctctttacgc gtatcgtggc tcattcgacc aaccggatgc
     8401 gaaaaggttt gtttggtaag ctggaacgtt tgaccgttgc cttcttcgac agccacaagg
     8461 acggggatat tctctcccgc tttaccagtg acttggacaa tatccaaaac gcctttaacc
     8521 agtccttgac gcaggtggtg accaacattg ccctttatat cggcatggtt atcatgatgt
     8581 tccgtcagga tactcgcttg gcatgggtga cgattgcttc tacgccagtt gccttgattg
     8641 ccttggtcat catcattcgc ctgtcacgca aatatacaga tttgcagcag gctgcggtgt
     8701 ccaagctcaa tgcctacatg gatgagaaga tttcgggaca gaaggcgatt attgtacaag
     8761 gtgtgcagga agaaaccatt gcaggtttct tggagctcaa tgaagaagtt cgccgtacaa
     8821 ccttcaaggg tcgcttgttt ggtggtgttc tcttcccatt catgaacggt ctgagcttgg
     8881 tcaatacggc tattgttatc tttgcaggtt ccagcattgt tctcaatgac agatcgctgg
     8941 aaacggctgc cgcactcggt ttggtcgtga cctttgtaca gtattcgcaa cagtattacc
     9001 agcctatcat gcagattgca gctagctggg cagaattgca gttggccttc acaggtgctc
     9061 atcgtatcca ggaaatgttt gatgagcctg aggaagtccg ccctcaaaac gctccgctat
     9121 ttaccgaatt aaaagaaggt gttgaaatca aggacatcga ctttggctac ctgccaggtc
     9181 agaaggtctt ggacaaggtg tccatttcag ctcctaaggg caaaatggtg gcggtcgttg
     9241 gtccgacggg atctggtaag actaccatta tgaacttgat taaccgcttc tatgatgtca
     9301 atagtggtag tgtggccttt gacggtcgcg atattcggga atatgacttg gacagcttgc
     9361 gggataaggt cggtattgtc ttgcaggagt cagtgctatt ctcgggtact attgcggaca
     9421 atatccgctt tggtgatgaa agcatttcgc aggaaatggt ggaaaccgca gctcgtgcta
     9481 cccatatcca cgacttcatc atgagcttgc cagagggcta tgaaaccttt gtgaccgatg
     9541 atgagaatgt cttctcgaca ggtcagaaac agctgatttc cattgcccgt acgcttttga
     9601 cagatccaca agtcttgatt ttggacgaag caacgtctaa cgttgatacc gtaacggaag
     9661 ccaaaattca aaaagctatg gaggctatta tcgcaggacg gaccagcttc gtcattgccc
     9721 atcgcctcaa aaccattctc aatgcggatg aaattatcgt cctcaaagat ggaaaggtaa
     9781 tcgagcaagg caaccacagt caactcctca aactaaacgg cttctacgcc gaactctacc
     9841 acaaccagtt tgtgtttgaa taatatatag aaaaataaac agccaagata agtagaccac
     9901 aatccttaaa cgtttaggac gtggtttatc ttggctgttt ttgtggtagg cttactgctc
     9961 aatatggttg gttttggttt gattgagcca agcgtaggcg ataccgataa agaggccggc
    10021 tccgagccaa tttccaaaaa agaccacaat ccattgacga aggatattga tcatattgaa
    10081 ggcttcgaca ttgcttcgag tagcgttaaa agctaggagc atgaaagatg cgaaattggc
    10141 gaccagatgc tcattgatga ggaaaacgaa cataaaaatg gaggaaatga tgacaaagaa
    10201 cttagcagac tgttctttga tgagcatgaa gccaagtatt gccatattta caaacatatt
    10261 agccgtaatc ccttcaataa agttactcca gtcagatttt ccaagtttga tggtaacggc
    10321 attgacgaca aagctcttat cagagagatt gaggtaggag aaggactgat tgaagagcca
    10381 ggctagaata gtagcgccta caaagttaaa gaaagtacag tatagcagca tctgtgtcac
    10441 ttttttccag ctaatttgtt tatagtaggc accagttgtg agatacatca tgttagaagt
    10501 ggctaattca ccaccaaaaa taagaacaaa aaccagccca atagcaaaga tgaaggtaaa
    10561 gacaaagcgc gacaaacttg gaaattgact ggcaataacg tctgctccga taataccgac
    10621 agctgttgac atagtcaggt aggctcctgc atacatagaa cgcaaggcat agcggcctag
    10681 actttcgtca aaaagggctt ctttttttga aactgcagct gaaatttttt cttgaaatgg
    10741 tgacatagga actccttgtg aaatcattat caatattttg tttgaaaaat atagtgggaa
    10801 gagttcttcc cactatatgt gaacgattag tgagcggatg caccagaatc tgcatctgtc
    10861 ggtgtggaag tagcaggggc actaccagca tctgatgcac cagaggttgc gtcaacatgt
    10921 gcaggagctg cggcagttcc cgaaccacca accaagcgtt gaccagtagc ttcaagatac
    10981 caatctagcc atggtttgaa attaaagata atttcattga taccagcgta ggatccgtca
    11041 ggatagtaca tagcttggta gttgtgggtg ttgataattt cagcaggggt accaggtaca
    11101 atggtacgaa catattcctg gttaccatta cgcaaggtac cgacaaccca ttcaacattc
    11161 ttcatacggg caggaggtag cgtaccgtgg acagttgaca ggcgatttcc tacttgagca
    11221 agtacccgtt tacccaacat ggtatcaggt tcttggtgac tattgttgta gtagaggaat
    11281 tggttattat catctgcata ggtcaattca aatggcatcg cattgaggaa catattgagt
    11341 tggttaacgg tcaacagacc attgtccagt ttaacatagg tatctccctc aactgcgtta
    11401 accaatttag aagccttttc tagccaatct ggatcatcgg gatccacacc agtgatggtc
    11461 gttgcgattg gtttggtaca gtctaaatct tctggtgcga ttggctttgg ttttttcaat
    11521 ttggatacaa caccgacata cttgataaag ttgtctagac agctttctaa gaatttcacg
    11581 gtgccttcat tgatgatatt tcccttatcg tcaaaagctt ctttggcctt accaaggagg
    11641 aattcattac ctggtagtgt gtaagcattg acacctggtg catctaaaat tttccgtagg
    11701 tgaacttggg cacgagaagt tccttgatcg tagtaagatg ccccgataat cataactggt
    11761 ttattttcga atgggtgcaa attaaagctg agccattcca gagtactctt aagggcaggg
    11821 gtaatggtat gattgtgctc aggggtagca ataatgaccc cgtcagcacg ggtgattttg
    11881 ttgtaaaggt attgaattgc aaaacaatca gactggtctt cgtcctgatt gaacattgga
    11941 acatctttga tttccaaaag ttctagttca aacttcactt taaagtggcg ttgaatgaat
    12001 tgcaatagca tgcggttata agattgatct gcatttgatc caacaattcc gacaaatttc
    12061 atagtatatt cctctcttac aggttttccc aatcgaagtt ttcagcttct ttttggagta
    12121 atttttttgc gttagacagc ttgccagtca tggtgacaaa gaggcggaag tcatcaaaga
    12181 tggcatccag tttttgacta gtttctaaat caatgagctc cccattggca tcaaaggctt
    12241 gcaaggaatg tgacaataaa aattcatctg gcaagacagt ggccttgagt tcaggagcgt
    12301 tgagaatttg acgtagctgt agttgggcac gagaggaacc aagtgttcca taagaagcac
    12361 cagtaatcat aactggtttg tttaatagtg gatagacacc gtatgatacc caagcaaggg
    12421 cattcataag gacagctggg atagagtggt catattcggg agttccgatg atgactccgt
    12481 cagcagcctc aatttttgcg accaattctt tgacaatttc aggtaattct cgattggctg
    12541 gtttattgaa gattggtagt tccttgattt caaccagttc gatatctgcc ttatcagcga
    12601 agtgctgttc aatgtactgc aagagtttgc ggttggttga gcgagcggag tttgttccga
    12661 ccagtcctag aagtttcata gcgtcttctc tctttcctaa atttggtacc tttatcatac
    12721 ccgtttatcc aataaaatgc aagcgttttc tgaaagtgtg ataaaattgt tcaaaaattc
    12781 acgagttttt tggtataata ttagtatgca gagaatattc tatctagtat ttggttttgt
    12841 tagtttggtg gttggtgtca ttgggattgt tttaccgata gttccgacaa cccctctttt
    12901 acttttggct ggtttttgct ttgcgagaag ttcaaaaagg tttgaaaaat ggctacgcaa
    12961 tacaaaaatt tatcaatttt acgtagctga ttacgttgag actaaatcca tttcccgcaa
    13021 acgaaaaaag caaatcatct ggcaaattta cttactcatg gcaatttcta tctggctggc
    13081 tcctatttta ttggtcaaaa tgggactggg actattaaca atcttcatca cttactattt
    13141 gttttgggtc ataccggaga aataaagtca gatttgaggg ttgaacatcg tcctcaaaga
    13201 cggaaaagtg attgagcaag gcaactacag ccagctcctc aagctcaaca gcttctacgc
    13261 cgaacactac cacaaccagt ttgtgtttga atagacaaaa actccagcca ctaggttgga
    13321 gttttgcttt accctgtatt tcctgtataa tagacctatg aaaagacaga gtgttcgggt
    13381 tgaattattt cccctgaaaa aggaagaaat ccttgcctac ttagatgaaa aggggatttt
    13441 agtgaatgat tatttcaaga cctacctagc tcatcccact tatcaagaag tggtggagaa
    13501 acagaagtgt ttagttgaga ttgtcagcct agccgacatg ggatttgata gggaagcaac
    13561 tgctcctcag atagtggaga gggccgtgga gatgggttat cgatcaccac cagctcctct
    13621 gggagtttat cttcggttgg ccttgttgga acaggaagtc agccaggata ctgtactctc
    13681 ccaaggaaaa tcaccagacg gagccatttg cctgctgtcg cctcagttag aagaagaatt
    13741 caccttccct cgtagtgtct atcttcgcaa ggttgaccaa gacttgtggc tacgtgcagc
    13801 ccgctttgat gacgagtatg ccttcccctt aacaacactt tttgcatttg tgacgaaaaa
    13861 tgcgaatgaa tctgcagtag ggagtgagcc ctaaataacc aaagaggcaa atatgaagga
    13921 attacaattt ttaatttacc gagcagaaaa tgatcaagaa aaggctagtg tcattgtcag
    13981 cgatgagacg atttgggcca gtcaaaagga aatggcaaga ttgtttgatg ttggtgtacc
    14041 agctatcagc aaacatttga aaaatatttt tgaagaaggc gaactagatg agcattcagt
    14101 tatttccaaa atggaaacaa ctgcaagtga tggtaaaaat tatctaacta gttattacaa
    14161 tctcgatgcc atcatttccg tcggttaccg tgtcaattct caaaaggcta ctaagtttag
    14221 gcagtgggca acgactgtac ttcgagaata catgattaaa ggttttgcca tggatgatga
    14281 gcgtttgaag caaggcgaaa acttgttgga aaaagactat ttccgtgagc ttttagaacg
    14341 agttcgttct atccgtgcta gtgaacgacg aatctggtta caaatcacag atatttttgc
    14401 ggagattgcg attgattacg atgctaatag cttggtgacc aaacaattct atgctcatgt
    14461 gcaaaataaa tttcattatg caattacagg taaaacagct gcagaaatta tttatgaaaa
    14521 ggcggaccac accaaagtaa acatggggtt ggtaacctgg aaacactccc ctgacggacg
    14581 tattttgcaa tcagatgctc ttgtggctaa aaattatctg aacgaaaagg aaattcgttc
    14641 gctggaacgt agtatttcgg gctactttga ctatctggag cgacaaattg agcaaggaaa
    14701 gacccagacc atgcaagatt tggcagatag cattgaccga tttttagcct ttcaagacta
    14761 tgaactcttg gagggacaga gtcagattac cagtcagact gccaaagaca aagctaagtc
    14821 agaatatgca atttttaata agacccaaaa gataaattct gactttgaaa aattactaga
    14881 agatttatct tcaaaataag cactcgaaag gaaaaatatg aaaatccgtg gattcgaact
    14941 ggtcagccag tttacagatg aaaacttatt gccaaaacgt gagacagccc acgcagcagg
    15001 ttacgacctg aaagctgcgg agacggtcag cttggagcca ggtgagatta agctagtgcc
    15061 aacaggcgtt aaggcctata tgcaggcaaa cgaagtcctc tatctctacg accgctcgtc
    15121 caaccctcgc aagaagggcc tggtcctgat taactctgtt ggggttattg acggcgacta
    15181 ctatggcaat ccagccaatg aaggtcatat ctttgcccag atgcgaaata tcaccgaggg
    15241 aaccgtcgtg gtggaagctg gcgagcggat tgtgcaggct gtttttgccc ccttcctctt
    15301 ggctgacggt gaccaggccg acggcgttcg gacaggtgga tttggatcga ctgggaaata
    15361 gactactatg cagattctct ttgtgcggca ttccgaaccc gactacagta tgtttgacca
    15421 gcatgaacat cctcggctgt atgcaggttt tggacgggat ctggctcctt taactgaaaa
    15481 ggggcggact ttagctcagg aaattgctag taatcctatc ttttcccaag ctcaagtagt
    15541 cgtcgcttca agcgtcacgc gtgccttgga gactgcgacc tacattgctc atgcccagca
    15601 actacctctt ctggtcgaac ccttttttca tgagtggcga ccagatatga cggggcaaaa
    15661 tgccagtcaa gatgaggctg tcttagctca tcgattattt tgggaaaatg gcggagcggt
    15721 gcctgagtct tcacctgttc gctatgagac tgctgcggag atgagagagc gatttttaca
    15781 ggcccttgaa aaatacaaag cctatgaccg aatcgttatc gtctgtcacg gtatgctgat
    15841 acgccagttt gttcccaaag aaaccatagc ctactgcgaa atcctagaat acactctata
    15901 ggaggaaaag accatcgcta agaaaaaaac aacctttgtc tgtcaatcct gcgagtacca
    15961 ctcgcccaag tatctgggcc gttgccccaa ctgtggctcc tggtcttcct ttgtcgagga
    16021 agtggaagtc gcggaagtca agaacgagcg ggtcagcctg acaggtgaga agacccgtcc
    16081 gatgaagctc aatgaagtgt cgtccattca agtggctcgc accaagacca atatggagga
    16141 gtttaaccgc gtcctcggtg gcggtgtggt gccgggcagt ttggtcctga ttggaggcga
    16201 tccagggatt ggcaagtcca ccctgctcct gcaagtatcg acccaacttt cgactattgg
    16261 caccgtcctc tacgtgtcgg gggaagagtc tgcccagcag attaagctcc gtgccgagcg
    16321 tctgggcgac attgacagcg agttctatct ctatgcggag accaatatgc agagcattcg
    16381 gaccgagatt gagaaaatca agccagattt cctgattatc gactctatcc agaccattat
    16441 gagtcctgac atctctagcg tgcaaggctc tgtcagtcag gtccgtgaag tgaccaatga
    16501 actcatgcag attgccaaga ccaacaatat cgcaaccttt atcgtcggcc acatgaccaa
    16561 ggaaggaacc ttggctggac cgcggacctt ggagcatatg gtagacaccg ttctttattt
    16621 tgagggggag cgtcagcaca ccttccgtat cttgcgggcg gtcaaaaacc gctttggctc
    16681 caccaatgaa atcggcattt ttgaaatgca gtcgcagggc ttggtcgaag ttctcaatcc
    16741 aagtgaggtc tttctggaag agcggctgga cggggcgact ggctcggcta ttgtcgtgac
    16801 catggagggt acccgcccca ttcttgcgga agtgcaggcc ctggtgaccc cgaccatgtt
    16861 tggcaatgcc aagcggacca cgacaggact ggatttcaac cgtgccagct tgattatggc
    16921 ggttttggaa aaacgggcag gcctgctcct ccaaaaccaa gatgcctacc tcaagtcagc
    16981 aggcggtgtc aaactggatg agccagctat tgacctagcg gtcgcagttg cccttgcctc
    17041 cagttacaag gacaagccaa ctaacccaca agagtgcttt ataggcgaaa tcggtctgac
    17101 aggggaaatc cgccgcgtca atcggattga acaacggatt aacgaagccg ccaaattggg
    17161 ctttaccaag gtctatgccc ctaaaaattc cctgacaggt atcaagatac ccaaggaaat
    17221 caccgttatc ggcgtgacca ccattggtga agtcttgcag aaagtgttta agtgacgaaa
    17281 atattcgggg gagtgggaaa gaacttgaca ggtaaaaaga gttcgtcaac aagtcctt
//
LOCUS       DASFQS010000049        16993 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.049, whole genome shotgun sequence.
ACCESSION   DASFQS010000049 DASFQS010000000
VERSION     DASFQS010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16993
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.049"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..246)
                     /locus_tag="U1041_001319"
     CDS             complement(<1..246)
                     /locus_tag="U1041_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003068450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768429.1"
                     /translation="MTAASQLPMVKVNREEFLKTRFKDSPYLDKIIADGPTAVFTTKA
                     LRKEAEKIINDMTTKTSLISFAAGLPGNPFTAVAAGTA"
     gene            complement(378..1376)
                     /locus_tag="U1041_001320"
     CDS             complement(378..1376)
                     /locus_tag="U1041_001320"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEM4768430.1"
                     /translation="MQFALMSGLVAFLATVLLIPRFITFYQAKRIEGQQMHEDVKQHQ
                     FKAGTPTMGGTVFLVVAILVSLLFATAFQLLTGGVLAILFILALYGVVGFLDDFLKIF
                     RKINEGLNPKQKLALQILGGIVFYFVHVRGAGGGELNVFGHMIHLGVLYFPFVLFWLV
                     GFSNAVNLTDGIDGLASISVVISLLAYSVIAFNEQKFDILLVCVTMIGGLLGFFVYNR
                     KPAKIFMGDVGSLALGGMLATISIALRQEWTLLLIGLVYVIETSSVMLQVSYFKYTKK
                     RFGEGRRIFRMTPFHHHLELGGLTGKAEKWSEWKVDFFLWSVGLIMSLITLAILYL"
     gene            complement(1378..3627)
                     /locus_tag="U1041_001321"
     CDS             complement(1378..3627)
                     /locus_tag="U1041_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM4768431.1"
                     /translation="MPRRNNKLLRYVLKKRYVPSKNRRRVGQSLLLLTVFVFFLFLIN
                     FAYIIGTDSKFGVDLSERADAVHQREVTVQAKRGTIYDRTGIPIAEDSTTYTVYAIID
                     TEYVSELKKVLYVQSSQFSKVAEIFKKHLGMETDYVMEQLNQPKLKQVYFGTLGKNIS
                     YSTMSSIQEEMKAAGIEGIAFDASPGRMYSNGNFASIFVGLANPVENKDGSYSLQGVS
                     GLEYYLNDILAGQDGKVIYEKDSQGRVLPGTEKVETETVNGQDVYTTISADLQRSLET
                     NMNTFFDNAKGRYANATLVSAKTGEILATTQRPSYDSDTKEGLGQEGLLERSLLYQEA
                     FEPGSTMKVLTVASAIDNGTFDPNAYYTNNEYVIADAKINDWTLNAGYSAVTLNYAQG
                     FSLSSNVGMTLLQQQMGDEKWLNYLTKFRYGYPTRFGMGDEAPGLVPEDNIVTIAMST
                     FGQGISANQAQMLRSFTAIANNGIMLEPKFISALYDPNTDTARVSSKEEVGNPVSEQA
                     ADDTLRYMINVGTDPVYGTLYSHDLQGPAIQVDGYDIAVKSGSAEIASEDGQGYIKGA
                     YTNSVVAMIPAEDPEFIMYVTIRQPEVLNVLSWRDIVSPTLKEAMLLKDNLNLDSPAP
                     ALTQVANETEYQLPDLIGKAPGESAEELRRQLVQPVILGNGAEIKKVSVEKGSNVIAN
                     QQVLLLTNKFEEMPDLYAITKENMDIFAEWTGIEVTYKGTGSKVVDQSVEVGTALNKT
                     EKITITLGD"
     gene            complement(3627..3950)
                     /gene="ftsL"
                     /locus_tag="U1041_001322"
     CDS             complement(3627..3950)
                     /gene="ftsL"
                     /locus_tag="U1041_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEM4768432.1"
                     /translation="MLQEKRREATMRVIGDKIRTFTRVEKAFYSSIVLSGLALAIGII
                     FMQTRLLQLQSGMAKVNQDISQKQIEINDAKQAVNELTRSARLMEIAEKAGLTFNNDN
                     IGVAE"
     gene            complement(3961..4911)
                     /gene="rsmH"
                     /locus_tag="U1041_001323"
     CDS             complement(3961..4911)
                     /gene="rsmH"
                     /locus_tag="U1041_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEM4768433.1"
                     /translation="MSKEFNHTTVLLHETVDMLDIKPNGIYVDATLGGAGHSEYLLSQ
                     LTDGGHLYAFDQDQTAIDHAQIRLATYIEKGQVTFIKDNFRNLKARLAELGVTEIDGI
                     CYDLGVSSPQLDERERGFSYKQDAPLDMRMNREGHLTAYDVVNNYDYHDLVRIFFKYG
                     EDKFSKQIARKIEQARAVKPIETTTELAELIKSAKPAKELKKKGHPAKQIFQAIRIEV
                     NDELGAADESIQQAIDLLALDGRISVITFHSLEDRLTKQLFKEASTIDVPKGLPFIPD
                     DLKAPLELVNRKPILPSQEELEANNRAHSAKLRVAKKVHK"
     gene            5179..5367
                     /locus_tag="U1041_001324"
     CDS             5179..5367
                     /locus_tag="U1041_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768434.1"
                     /translation="MNRVKDYRLLLGISQLDLAKAIGVSRQTINMIENNKYNPSLDLC
                     INLAKALQTDLNSLFWNQ"
     gene            5378..5911
                     /locus_tag="U1041_001325"
     CDS             5378..5911
                     /locus_tag="U1041_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3278 domain-containing protein"
                     /protein_id="HEM4768435.1"
                     /translation="MKDIFTKILNQATKDFYSISGPMDEMRQQESYRFSNTIVMIVFP
                     ILVIGNTIALLIALRQPEKVGFLLPLTNILIIGFTQALASHLALKNGISQSYEDEIDV
                     TKLNKSLVKSSRSTFFGAFLASTTAPAFYKEWSVFLEELTDPTLLLGRLIVAGAITFV
                     HYYYCKKQLQKKILANK"
     gene            5927..6127
                     /locus_tag="U1041_001326"
     CDS             5927..6127
                     /locus_tag="U1041_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768436.1"
                     /translation="MKKNTRQALISTLIFIPLFVLFQLWGNSGADILHTISQVKFWLQ
                     LLITGAIYFLGLAYLPLIFHRK"
     gene            6141..7223
                     /locus_tag="U1041_001327"
     CDS             6141..7223
                     /locus_tag="U1041_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3278 domain-containing protein"
                     /protein_id="HEM4768437.1"
                     /translation="MKKETFQDKLIKRFYGITGPLDEYRKQEAFRLGNTCFILLFWGT
                     MVLTLLAIALYKRFPQVVAYGYPTALFLSTLSASMYMTSKMRHSQVDSLDVEELTTKE
                     QKQLKGASIKFALYFTTVMYIWVVVFGAWMEGLNPFDHLFDLRKFLAACLGGIFTGIA
                     LEIMLRKRMKKAEQLTIRSAISKEEPKWIKNMIRHFYGIRGPLDEYRRTRADEIGGLA
                     FVYHFYFLALGNAIAYFLAYRYPVEVANYYPMIIALFSFILLGIVNMQTLHADLPQYD
                     LDELSPEERQGRPLNPILWGLGVALLSTVFAGVADLFNLNLPLTASILHTKSLLFGGT
                     MGIFASIALSAFAYLHKLEAETTKKK"
     gene            7236..7580
                     /locus_tag="U1041_001328"
     CDS             7236..7580
                     /locus_tag="U1041_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4768438.1"
                     /translation="MNKPFSPKQTCQFFVLFYGLFSAFFFYSYMVNEPISDSFLLMLP
                     TIQIIKSYQTAEEKRYFIIQAIFALFAMTLTYSVGIWLGHVKPHILILPAGFALAILY
                     RLYFKKEKTDER"
     gene            7570..7917
                     /locus_tag="U1041_001329"
     CDS             7570..7917
                     /locus_tag="U1041_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768439.1"
                     /translation="MNVNKPKLILTLIVLSYTTICSLYIHSYLTGDNPPIFILLFTML
                     PILNSDWQTSSPEANAFQKAIYLYHKPLFWFLFAGFALTFSIVFFAGKIQPLHAGFWG
                     IFALLLFIGQLKK"
     gene            7970..8398
                     /locus_tag="U1041_001330"
     CDS             7970..8398
                     /locus_tag="U1041_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusG domain II-containing protein"
                     /protein_id="HEM4768440.1"
                     /translation="MTIKSILKQLKLFDYILIGFTLVLSFLPAIFTYTHLTTDTNEAK
                     TIAYVRINGEVVDQFELSKDTPHQEKTYYPNEGQYNIIEVDGERIRVKEDNSPDQIAV
                     MTSWISQPGELSVCLPHNLLIEIKSVGGENTDEEELILPL"
     gene            complement(8440..9396)
                     /gene="menA"
                     /locus_tag="U1041_001331"
     CDS             complement(8440..9396)
                     /gene="menA"
                     /locus_tag="U1041_001331"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HEM4768441.1"
                     /translation="MNKSTKGLSLPVFLEFVELKTKVASVFPMTLGILWSLYRYQAFN
                     WLNTLLFVLAVLSFDMCTTAINNSMDYHKAKDEIYRQESNVIGKFSLDFRQMIGIVLA
                     LLVFSLLVSLLLVWRTSWLLLPMGALCFLIGIFYTFGPIPLSRMPLGEVFSGVTMGFG
                     IFFLAVFIQQPDLLLTSQVSGQWMTLQFSWTKIIEIIFMSIPLVTLIANIMLANNTCD
                     LEEDIRNHRYTLVYYIGKKNALKLYFVLASLPWLLWIIYCLTGFLPIWALAGLIGVWP
                     AYKSLETFLKKQVKRETFIEAVKSFVLFALLYVVILALALIF"
     gene            complement(9389..10438)
                     /locus_tag="U1041_001332"
     CDS             complement(9389..10438)
                     /locus_tag="U1041_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEM4768442.1"
                     /translation="MKKIASLLFVGLLMVLLVACGGKQNESLSVVKTPLTRSESLLHT
                     VVQLSIYHENQEEVMDEAVSYIKEMESLLSTNLEGADVYRINQAAGKEAVKVDERTFE
                     VIETAIEMSEESQGLFDISIGAVSNLWKIGDEDARKPSDEEIKAALPFINYKDITLDK
                     EKKTVFIKEGMTLELGAISKGYIADKVRELFASKGITTAIINLGGNVVVMGDSPTTQN
                     GWNVGVQDPDQVRGATVGSVPGTHDSVVTSGIYERFLEVDGVKYHHILDPKTGYPVEN
                     DISGVTVFSKTSIQGDALSTTLFLLGVEKGLDFINQIDGVEAVFIDKEQGVHLSDGLK
                     ESFGLTNEEYHLVNE"
     gene            complement(10515..10994)
                     /locus_tag="U1041_001333"
     CDS             complement(10515..10994)
                     /locus_tag="U1041_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HEM4768443.1"
                     /translation="MKTTKVVLKSLVVLGAVFALAACGSKQESTSTSSSTTETVVLKD
                     GTYKAESGKDDYGYKIVHTLTVKDGKISESKFDYEAEDGSLKSANEEYNKNMKDKAGV
                     SAGEAIEQLNAALVKEQDLSAVEVVSGATQTSEDFKKSTEALLAAAAEGKTETVKLD"
     gene            complement(11073..12062)
                     /locus_tag="U1041_001334"
     CDS             complement(11073..12062)
                     /locus_tag="U1041_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM4768444.1"
                     /translation="MVHQIWNTYPEIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEA
                     PGKYLRAGLCLLFAQMTEGKISRSKLYFAAYLEVLHLATLIHDDVIDGSDKRRGVEAA
                     HQQFSNRIAIYTGDYLLAYSGRLLGKGLRFLDISQDDLNLGNDKLMETILRGELSQLI
                     NQFDTNMTMKSYLKQIQGKTAFLFGLACQLGSFVPGQSKKESQLAFRAGQALGMAFQI
                     RDDLIDYQLEVEESGKPRLQDIQNGIYTAPLLFAMREDKSIQQQLRAYIQSPTAEELE
                     ILTDRIFSTHAIAKTEKLIVSYLEKMMNFVDRIPQLSTASMQNLVAIVFSHYF"
     gene            complement(12081..13973)
                     /locus_tag="U1041_001335"
     CDS             complement(12081..13973)
                     /locus_tag="U1041_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM4768445.1"
                     /translation="MTKNIVIVGAGYAGIAAARLLGKTFKKDQDVTVTLIDKNSFHTY
                     MTELHEVAAGRVEANAIKYDLQRIFKKYPKVQLVTDKVVEIDYDKKQVVAEHQTLDFD
                     YLLLAMGGEANDFGVKGVKEHGFTLWSIEAAERLHDHMIDACYRAMREHDEAKRRALL
                     TFTVIGAGFTGIEMIGELIDWVPILAREFKLDPKEFSLKVVEATPNILAMVTEKEQVK
                     ARKYLEKKGVELVLGDGVASVQEDSLTLSSGRQIPTYTSIWTAGVQANTDASEFGIEK
                     ARAGRLVANEFMEAKGKENVYVAGDLVYFEESEGKPTPQIVQAAEQTGHTAASNIIAA
                     IKGGEKHSYKGKYDGFMVSIGARYGVAFLMDKYHMSGFLAMAVKHMVNLLYFFTIRSF
                     FYMGSYVRHEFFDIQNKRNIFGGHTSGKGNLLWSVPMRVLYGSVWLYEGIKKAFGLFG
                     TTSWFGDQVVFPFPWLADPVSGASAAEAVSSASQAATAAAEAAEPIFGLSYAYGEAPM
                     AVLDKMPDWFATIMEFMMPNQEVALFMQKFMTVAEIGIGLALIAGAFVWIVSAATVAL
                     VVMFSLSGMFYWVNIWFIPAAISLMNGAGRAFGLDYWIMPWLGRFLDKKIYGKPKHIY
                     RIKDKK"
     gene            14156..14695
                     /locus_tag="U1041_001336"
     CDS             14156..14695
                     /locus_tag="U1041_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gx transporter family protein"
                     /protein_id="HEM4768446.1"
                     /translation="MNSKRQTLNFITMLAAQAVVISLIERLITPPFAFAPGAKLGLGN
                     LISLIAIFTLPTKDSLKVVALRLLISTFLGGTFSTFLYGFAGTTLSYVGMLSAKQLGP
                     NRVSPIGISILGGMLHNLGQLLVFATIARSFYVLNYLPILAFTGILSGLLVGLAATYL
                     LQKVGPLRHYHQQVLAEWK"
     gene            14958..16307
                     /locus_tag="U1041_001337"
     CDS             14958..16307
                     /locus_tag="U1041_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEM4768447.1"
                     /translation="MSPFRIKLSPSQRIIISFLFVILTGSILLSLPISQISTSTASYW
                     DHLFTSVSMVCVTGLFTKAVAETYSTFGQIICMMLIQIGGLSLIGFIGLFALRGGRKM
                     NFINMATLQEALNRSDTKYFRNFLKSAFGFTLAVEAFGALLLSFHFVPEFGWARGLFT
                     SIFVAISAFCNAGFDNFGSTSIMRYVDNPLINITLASLIIMGGLGFSVWFDLQTQIGQ
                     KRSLRKLGFHTKIVLGLTATILTLGTLTTLLTEWNNPSTIGQLSFGHKLLASFFQTVT
                     MRTAGFASIDYTKAEPITLLLYIFQMMLGGAPGGTAGGIKITAFLTLVLYARSEILGL
                     PHTNFMGRTIDNLSIRKAFATFSVFLLMFIIGLFALALTDDRQPLLFLMFEVMSALAT
                     VGVTANLTPSLTMAGQAVIMALMFFGRIGPLSILASLSVRKLSKTESLQYAKSSMLV"
     gene            16319..16984
                     /locus_tag="U1041_001338"
     CDS             16319..16984
                     /locus_tag="U1041_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEM4768448.1"
                     /translation="MPNYTIGILGLGVFGTTIAKTLHNYDCNIIAIDNHEQRINHLEP
                     ILTRGIVGDITDRSLLRAAGIGNCDAVVVATGENLESSVLAVMHSKVLGVPMVIAKVK
                     GTTAKEVLLRVGADKVISPERETGISLAKQLLHRDTTSLFELDGNVSIVEFHPPVKWI
                     GKTLGELKLRQHYKLNIIGYRSGENQELNIQLTPDYVFKSNELILAVTDHNTVDHFEE
                     LTN"
BASE COUNT         4905 a         3975 c         3077 g         5036 t
ORIGIN      
        1 agcagtacct gccgccaccg ctgtaaatgg attccccggt aaaccagctg cgaaagaaat
       61 caaagatgtt ttcgtagtca tatcattaat gattttttca gcttccttac gcaaagcttt
      121 tgtagtgaag accgccgttg gtccatccgc aataatttta tctagatagg gactatcttt
      181 aaaacgagtc ttcaaaaatt cttcccgatt gactttaacc ataggaagtt gactagcagc
      241 tgtcatggtt tgaataacca ctccatataa ctattcttga ttgaattgtt ccatttttat
      301 cctccaccaa ttctctctat ccccccgacc atatttgtca aggtaaaaaa aacagcattt
      361 ctgctgtttc tgacatttta tagataaaga atagctaggg taatcaagct catgatgaga
      421 ccgactgacc agaggaaaaa gtcaactttc cactcgctcc atttttcagc ttttccggtc
      481 aaacctccaa gctccaaatg gtgatgaaaa ggagtcatac ggaagatacg acgaccttct
      541 ccaaagcgtt ttttggtgta tttaaaatat gaaacttgca acataacaga ggatgtttca
      601 ataacataga ccaggccgat aaggaggaga gtccattcct gacggagagc aattgaaata
      661 gttgccaaca taccaccgag agccaaactt cccacatccc ccatgaaaat cttcgctggt
      721 ttacggttat aaacaaagaa accgagcaag cctccaatca tggtcacaca aactagaaga
      781 atatcaaatt tttgctcatt gaaggcgatg acagagtaag ctagaagact gataacaact
      841 gagatagaag ccaatccatc aataccatct gtcaaattaa ctgcatttga aaaaccgacc
      901 agccagaaca gaacaaatgg gaaatagaga actcccaaat gtatcatgtg accaaataca
      961 ttcaattctc cgccacctgc tcctcttacg tggacaaaat agaagacaat ccctcctaaa
     1021 atttgtagag caagcttttg tttaggatta agaccttcat ttattttacg gaaaattttt
     1081 aaaaagtcat ccaaaaatcc tactacacca taaagggcaa ggatgaagag gatagcaagg
     1141 acaccacccg tcaacagttg aaaggccgtt gcaaacaaca agctgacaag tatcgcaaca
     1201 acgagaaaaa ctgttccccc cattgttggt gtacctgcct taaactgatg ttgtttcaca
     1261 tcttcgtgca tctgttgccc ctcgatgcgt ttggcttgat aaaatgtaat aaatcgtggg
     1321 attaagagaa cggttgctag aaaagctacc aatcccgaca taagtgcgaa ttgcatgtta
     1381 gtctcctaag gttattgtta ttttctcggt tttattcaaa gcggtaccaa cctctacact
     1441 ttggtcgact acttttgaac ccgttccttt ataggtcact tcaataccag tccattcagc
     1501 aaatatatcc atattctctt tggtgattgc gtacaggtct ggcatttctt cgaatttatt
     1561 tgtcaggagt agaacctgtt ggttggcgat tacgttactt cctttttcga ctgaaacttt
     1621 tttaatttca gcaccgtttc caaggataac tggttgaact aattgacggc gaagttcctc
     1681 agccgactcg cctggtgcct taccaatgag gtccggcaat tgatactctg tctcattagc
     1741 gacctgggtc aatgctggcg caggtgaatc cagattcaaa ttgtctttca acagcatcgc
     1801 ttctttcaat gtaggactga caatgtcacg ccaagacagg acatttaata cttccggttg
     1861 gcgaatggtc acatacatga taaattcagg gtcctcagca gggatcatgg ctactacaga
     1921 gttggtgtag gcacctttaa tatacccttg accatcttcg ctggcaattt ccgctgaacc
     1981 tgatttgact gcaatatcat agccgtcaac ctgaattgca ggcccctgta aatcatgtga
     2041 gtagagcgta ccataaacag ggtcagtacc gacattaatc atatagcgaa gtgtatcgtc
     2101 ggcagcttgt tcagaaactg gatttcccac ttcttctttc gaagaaactc tagctgtatc
     2161 tgtattggga tcataaagag ctgagatgaa tttaggctct agcataatac cgttattcgc
     2221 aatggcggta aaactacgaa gcatctgtgc ttggtttgca gaaatacctt gaccaaaagt
     2281 tgacattgcg attgtgacaa tattgtcttc cggaactaag ccgggtgctt catctcccat
     2341 tccgaaacgc gttggatagc cataacgaaa ttttgtcagg taatttagcc atttttcatc
     2401 tcccatctgt tgctgcaata aggtcatccc aacgttactg gatagggaga agccttgcgc
     2461 ataattgaga gtcacagctg aataacctgc attgagggtc cagtcattga ttttcgcgtc
     2521 tgcaataacg tactcattat tggtataata ggcatttggg tcaaaggttc cattatcgat
     2581 agctgacgct actgttagca ccttcattgt tgaaccaggc tcaaaggcct cttgatataa
     2641 gagtgaccgc tctagtaggc cttcttgtcc cagaccttct ttggtatctg aatcatagct
     2701 tggcctttgg gtcgtcgcca gtatttcacc cgtcttggct gaaaccaaag ttgcattcgc
     2761 atatcgccct ttggcgttat caaagaaggt attcatattg gtttcaagag aacgttgcag
     2821 atcggctgaa attgtcgtat agacatcctg cccgtttact gtctccgttt caaccttctc
     2881 tgtcccaggt aggacacggc cttgactatc tttctcatag ataacctttc catcttgacc
     2941 agccagaata tcattcagat aatattccaa accactcaca ccctgtaagc tataactacc
     3001 atccttgttt tcaaccggat tagctaaccc gacaaaaatt gaagcaaaat ttccattcga
     3061 atacatccgt cctggactag cgtcaaaggc aatcccttca atacctgccg ccttcatctc
     3121 ttcttggatt gacgacattg tactatagga gatattctta cctaaggtcc caaagtacac
     3181 ctgcttcagt ttcggttgat tcagctgctc cataacataa tctgtctcca ttccgagatg
     3241 ctttttaaag atttctgcta ctttgctgaa ctgagaagac tgcacataca aaactttttt
     3301 cagttctgac acatattctg tgtcaatgat ggcatagact gtataggtcg ttgaatcttc
     3361 tgcaatagga attcctgtac ggtcgtatat cgtcccccgt ttagcttgaa cggtaacttc
     3421 acgctggtgt accgcatcag ctctctctga caagtccacc ccaaatttac tatcagtgcc
     3481 gataatatag gcaaagttga ttaaaaagag aaaaaagacg aaaaccgtca aaagaagtag
     3541 gctctgtcct actcttcgac gattttttga cggaacatat cgttttttca agacataccg
     3601 caagagttta ttatttcttc tgggcattat tcggctactc caatattgtc attattaaaa
     3661 gttaatccag ctttttcagc aatttccatc aagcgagctg aacgtgtcaa ttcattgaca
     3721 gcttgctttg catcgttaat ttcaatctgt ttttggctaa tatcttgatt gactttggcc
     3781 atgccagatt gaagttgcaa aagccgcgtt tgcataaaga taattcctat cgcaagggct
     3841 aatccagata atacgatgct tgaatagaag gctttttcta cacgtgtgaa ggttctaatt
     3901 ttatcaccga taacccgcat agtggcttct ctacgttttt cttgcaacat agactctctc
     3961 ctatttatgt actttcttgg ctacacgcag tttggctgaa tgcgcgcgat tattggcctc
     4021 taactcctct tgacttggca aaatcggttt acgattgacc aattcaagtg gcgccttcaa
     4081 gtcatctgga ataaacggta aaccttttgg aacatcaatc gtactggctt ctttgaagag
     4141 ttgtttggtc agacgatctt ctaaagaatg gaaagtaata acagaaatcc ggccatccaa
     4201 agccaataag tcaatggcct gctggataga ttcgtctgct gctcccaact catcgttgac
     4261 ctcaatccga atagcttgga aaatctgctt agcaggatgc cccttcttct taagttcctt
     4321 ggctggcttg gcagatttga tcagctctgc caactcagtc gttgtttcaa tcggcttgac
     4381 cgcacgcgcc tgttcaatct tacgagcaat ctgcttggaa aatttatcct caccgtattt
     4441 aaagaaaatc cgtaccaagt cgtgatagtc atagttattg accacatcat aagccgtcaa
     4501 atgtccctca cgattcatcc gcatatcaag cggagcatct tgtttgtaag aaaagccacg
     4561 ctcccgctca tccaactgtg gactagatac tcctaaatca taacaaatcc catcaatctc
     4621 tgttacacct agctctgcta aacgagcctt gagattgcgg aaattatcct tgataaaggt
     4681 cacttgtccc ttttcaatgt aggttgccaa gcggatttgg gcatggtcaa tggccgtctg
     4741 atcctggtca aaggcataaa gatgcccacc atccgtcaac tgactgagca gatactcact
     4801 atgccctgct ccccccagcg ttgcatctac ataaattcca tttggtttga tgtctaacat
     4861 atcgactgtc tcatgcaaga gaacagttgt gtgattaaat tccttgctca tatcttttct
     4921 attgtaccac aaaacaatac aaaaagttgt tgcaaacttt ttacaaaaaa tatgtcaaat
     4981 atagttgaca acatctttgg ataggtctat aataacatta tagataaatg tcaagtatag
     5041 ttgacatcaa cagggaggtc tcccatattt ttttacaacc aactgtcgca tataattgac
     5101 atcgtgccta aggatagcta gtctatcctc tctctttaca atagagtgtc gcatatattt
     5161 tacacgaaag gagaacccat gaaccgtgtc aaagattacc gcctactgct agggatttcc
     5221 cagctggatc tggccaaggc catcggcgta tccaggcaga ccattaatat gattgaaaat
     5281 aacaagtaca acccctcgct agacctttgt atcaacctag ccaaagcttt acagaccgat
     5341 cttaatagtc tcttttggaa tcaataagga gttcatcatg aaagatattt ttacaaaaat
     5401 tctcaatcaa gcaaccaagg atttttattc cattagtggt cccatggatg aaatgcggca
     5461 gcaagaaagc tatcgcttca gtaacaccat tgtcatgatt gtttttccta tcctagtaat
     5521 aggaaataca attgcacttc ttatcgcctt acgacaacct gaaaaagttg gctttctgct
     5581 ccccctaacc aatatactga tcattggttt cacgcaagcc ttagcttccc accttgcctt
     5641 gaaaaatggc attagtcaaa gctatgagga tgaaattgat gtgaccaagc tcaataaatc
     5701 tcttgtaaaa agtagtcgta gcacattttt cggggccttc ctggcttcca cgactgcccc
     5761 tgctttctat aaagaatggt ctgtatttct tgaagaacta acagacccga ccctcctact
     5821 aggtcggtta attgttgcag gagctatcac cttcgtccat tactactatt gtaagaagca
     5881 gttacaaaag aaaattctcg caaacaaata aaagggagaa aacaccatga aaaagaacac
     5941 acgtcaagct cttatctcta ctcttatatt tatcccgctc ttcgtcctct ttcagctttg
     6001 gggcaatagc ggagcagaca tcttgcatac catcagccaa gtcaaattct ggctacaact
     6061 gctgattacc ggggcaatct acttcttagg actagcctac ctacctctca ttttccatcg
     6121 taagtaaata ggagtatcgt atgaaaaagg aaacctttca agataaattg atcaaacgct
     6181 tttacggtat cacaggacct ctggatgaat atcgcaaaca agaagccttc cgactgggca
     6241 atacctgctt tatcctactc ttttggggca ccatggttct taccctactg gcaattgcct
     6301 tatacaaacg cttcccacaa gtcgttgcct atggctaccc aacggctcta ttcctatcca
     6361 ctctttccgc cagtatgtat atgacatcca agatgcgcca cagtcaagtg gacagtttag
     6421 atgtagaaga actgactacc aaggaacaga aacaactcaa gggagcaagt atcaaattcg
     6481 ccctctactt cacaaccgtt atgtacattt gggtggttgt tttcggtgcc tggatggagg
     6541 gactcaatcc tttcgaccac ctatttgacc tccgaaaatt tctagcagcc tgtctaggtg
     6601 gtattttcac gggcattgcc cttgaaatca tgttacgcaa gcgcatgaaa aaagcggaac
     6661 aactaactat ccgctctgct atttctaaag aagaacccaa gtggatcaaa aatatgatac
     6721 gacacttcta tggtatccgt ggtcctttag acgagtaccg acggacaagg gcagatgaga
     6781 ttgggggact agcttttgtc tatcacttct acttcctagc tcttggaaat gccatcgcct
     6841 acttcctagc ctaccgctat cctgtggagg ttgccaacta ttatccaatg atcattgctc
     6901 tctttagctt tatcttgcta ggtatcgtca atatgcagac cctccatgct gacttgcccc
     6961 aatatgactt ggatgagctt agccctgagg aaagacaagg tcggcccctt aacccaattc
     7021 tttggggact gggagttgcc ctgctttcga cagtttttgc tggagtagca gacctcttta
     7081 acctcaatct tcccctaacg gcctcaatct tgcatacaaa atccctccta ttcggtggca
     7141 cgatgggtat ctttgctagc attgccctgt ctgcctttgc ctatctgcat aaactggaag
     7201 cagaaactac taagaaaaaa taaggagcta ccatcatgaa taaacccttc tctcccaagc
     7261 aaacctgtca attttttgtt ctattttatg gattattttc tgccttcttc ttctactctt
     7321 acatggtcaa tgagccgatt agcgattcct tcttgctcat gctaccgacc attcaaatca
     7381 tcaaatccta tcaaacagca gaagaaaaac gctactttat catccaagcc atctttgccc
     7441 tatttgccat gaccttgact tattccgtgg gcatttggct aggacatgtc aaaccacata
     7501 tcctcatcct tcctgctgga tttgctctgg ctattcttta tcgattgtat ttcaaaaagg
     7561 agaaaacaga tgaacgttaa caaaccgaaa cttatactca ctttgattgt tctctcctat
     7621 acaacaattt gtagcctgta tatacatagc tacctgactg gggacaatcc accaatcttt
     7681 atcttactat tcactatgct tccaatcttg aatagtgact ggcagactag cagcccagaa
     7741 gcaaatgctt tccaaaaagc tatctatctt tatcataaac cactgttctg gtttctcttt
     7801 gcaggttttg ccctaacttt ctccattgta tttttcgctg ggaaaattca gccactccat
     7861 gctggatttt ggggaatatt tgctctcctg ctctttattg gccaattgaa aaagtagtct
     7921 gcatccaaca ttttacaaag taggattttt tctataaaat agactacata tgactatcaa
     7981 atccattctc aaacaactca aactatttga ttatatctta atcggattca ccctagtttt
     8041 atcctttctt ccagcaattt ttacctacac acatctgact acagatacta atgaggcaaa
     8101 aacaattgcc tatgtccgca tcaatggtga ggtggtcgac caatttgaat tatcaaagga
     8161 cacaccccat caagaaaaga cctactatcc caatgaaggg caatacaaca tcattgaagt
     8221 tgatggcgaa cgcattcggg tcaaggaaga caatagccca gaccaaatcg ccgttatgac
     8281 cagctggatt agccagccag gagaactctc cgtctgcctg ccacataacc tgttgattga
     8341 aatcaaatcc gtcggcgggg aaaacactga cgaagaagaa ctcattttac cactataaga
     8401 aagaagacac agcctgatga acgactgtgt ctttcctttt tagaaaataa gggctaaagc
     8461 aagtatcacc acatatagca gcgcaaagag tacaaaactc tttactgcct cgataaaggt
     8521 ttcccgtttg acttgctttt tcaaaaatgt ttctagactc ttataagcag gccaaacacc
     8581 gattaaaccg gccagtgccc agattggtaa gaatccagtc agacagtaga ttatccacag
     8641 caaccatggt aaacttgcca agacaaaata caatttaaga gcatttttct tgccaatata
     8701 gtaaaccaga gtataacgat ggttgcgaat atcttcttct aaatcacagg tattgttggc
     8761 caacatgata ttggcaatca aggttaccaa aggaatagac atgaaaataa tttctattat
     8821 ttttgtccaa gagaattgca aggtcatcca ctggccgctc acttggctgg tcagtagcaa
     8881 atctggttgc tgaataaata cagcaagaaa gaagatgcca aatcccatgg ttactccaga
     8941 gaaaacttca ccaagaggca ttctcgaaag tggaatcggg ccaaaggtgt aaaagatacc
     9001 aatgaggaaa cagagagctc ccattggtaa tagaagccag ctggtccgcc aaacaaggag
     9061 taatgaaacc agtagagaaa aaacaagtag ggcaaggacg attccaatca tctgccgaaa
     9121 atctagagag aattttccaa tcacattgct ttcttgacga tagatttcat ccttggcctt
     9181 gtggtagtcc atgctattgt tgatggcagt tgtacacatg tcaaagctaa ggactgccag
     9241 aacgaacaaa agtgtattga gccaattgaa tgcttgatag cgatacagac tccataaaat
     9301 ccccagggtc atgggaaata cactggcaac tttagttttt agttcaacaa attctagaaa
     9361 taccggcaga ctgagccctt tagttgattt attcattgac aagatgatac tcctcattcg
     9421 ttaatccaaa gctttctttc aagccatcac tcagatgaac gccctgctcc ttatcgatga
     9481 aaacagcttc tacaccgtca atctgattga taaagtcaag acctttttcc acacctagta
     9541 agaagagagt tgtggataat gcatctcctt ggatagatgt tttggaaaag actgtcacac
     9601 ctgagatatc gttttccaca ggatatcccg tttttggatc cagtatgtgg tggtatttga
     9661 caccatcgac ttctaaaaaa cgttcgtaaa tccctgaggt aacaaccgaa tcatgtgtcc
     9721 ctggcacaga accaaccgtt gctccacgca cttggtctgg gtcctgaact cccacattcc
     9781 aaccattttg cgtcgtaggc gaatccccca taaccactac attcccacct agattgatga
     9841 tagctgtcgt aatcccttta ctggcaaaca attctctaac cttatctgca atgtaacctt
     9901 tggaaatggc tcctaattct agcgtcattc cttctttgat aaagacggtc ttcttctcct
     9961 tatctaaagt aatgtcttta taattgataa atggcagagc agctttgatt tcttcatcac
    10021 tcggcttacg tgcatcctca tctccaattt tccacagatt gctcacagct ccaatggaaa
    10081 tgtcaaataa gccctgactt tcctcactca tctcaatagc tgtttcaatc acttcaaagg
    10141 tacgttcatc aaccttaaca gcttcttttc ctgctgcctg attgatacgg tagacatctg
    10201 ccccttccaa gtttgtggat aacagacttt ccatctcctt gatataggag acagcttcat
    10261 ccatcacttc ttcctgattt tcatgataaa tgctcaattg cactactgtg tgaagcaagc
    10321 tttcactacg agtcaacgga gttttcacaa cagataaact ttcgttttgt ttaccaccac
    10381 aggcaacaag caaaaccatc agtaggccca cgaacaatag acttgcaatt tttttcactg
    10441 attttacctt ccccaaaaaa taagaagaca cagtagccaa acaagtgcga ctgtgtcttt
    10501 ttgaactgac taaattagtc aagttttaca gtttctgttt ttccttcagc agctgctgca
    10561 agaagggctt ctgtactctt cttgaagtct tcagaagtct gagttgcacc tgagacaact
    10621 tcaacagctg aaaggtcttg ttctttcact aaagctgcat taagttgttc gattgcttca
    10681 ccagcagaaa ctccagcttt atctttcatg tttttgttgt actcttcatt tgctgattta
    10741 agacttccat cttcagcttc gtagtcaaat tttgactcac tgatttttcc gtctttaaca
    10801 gtcaatgtgt gaacaatttt gtagccataa tcgtctttgc ctgactcagc tttgtaagta
    10861 ccatctttca atactactgt ttctgtagtt gaagatgaag ttgaagtaga ttcttgttta
    10921 gaaccgcaag cagcaagtgc aaataccgca ccaagaacta ccaaactttt caacacaact
    10981 ttagttgttt tcataacaat actccttttg taaagtaaat agttttatat ttataatgat
    11041 atacctaata aactaaattg tctagtattt ttttaaaaat aatgactaaa aactattgcc
    11101 accaaatttt gcatagacgc agtcgataac tgtggtattc tatctacaaa attcatcatt
    11161 ttttccaaat agctaacaat cagtttctct gttttggcaa tagcatgcgt tgaaaaaatc
    11221 ctatctgtaa ggatttccaa ctcttctgcc gtaggagatt gaatataagc ccgcaattgc
    11281 tgctggatag acttgtcttc tcgcatcgca aataatagag gtgcagtata gataccattt
    11341 tgaatatctt gaagtctagg ctttccagac tcctcaactt ctaattgata gtcaatcaga
    11401 tcatcacgaa tttgaaatgc catacctagt gcttgacctg cccgaaaggc taattgactt
    11461 tctttcttgg attgacctgg tacaaaactc ccaagttggc aggcaagtcc aaatagaaag
    11521 gctgttttac cctgaatttg cttgagataa gacttcatcg tcatattggt atcaaattgg
    11581 ttgattagct gtgataattc ccctcgaaga atggtttcca tgagcttatc attgcccaaa
    11641 ttcaaatcat cttgagaaat atctagaaaa cgaagacctt ttccaagtaa gcgaccagag
    11701 taggccagaa gataatcccc tgtatagata gcaattcgat tagaaaattg ttgatgagcc
    11761 gcctctactc ctcgtctttt atctgatcca tcaatcacat catcatgaat cagtgttgca
    11821 agatgcaaaa cctccagata agcggcaaag tagagctttg aacggctaat ctttccttcc
    11881 gtcatttgtg caaagagtag acagaggcca gcacgcaggt atttccctgg tgcctctaca
    11941 tattcaacaa tcttcgctgt aactgctgga tgcaggacca tcatctcaga taagatgatg
    12001 gattttacct cttcaagtcc cctctcaatc tcaggatagg tattccaaat ttgatgtacc
    12061 actaactttc tatatttcct ttatttttta tccttgatac ggtaaatatg cttgggcttt
    12121 ccataaatct tcttgtctag gaaacgaccc aaccacggca taatccaata gtctagaccg
    12181 aaggctctac ccgcaccatt cataagagaa atagctgctg ggatgaacca aatatttacc
    12241 cagtagaaca tgcctgacag gctgaacata actaccaaag caacggttgc cgcagataca
    12301 atccatacaa aggcaccagc aatcaaagcc agaccaatac cgatttctgc tactgtcata
    12361 aatttttgca taaagagtgc tacttcttgg tttggcatca taaattccat gatagtagca
    12421 aaccaatcag gcattttgtc caaaacagcc atcggtgctt caccataggc atagctcaaa
    12481 ccaaaaattg gttcagctgc ttctgccgca gcagttgccg cttgtgaggc acttgaaacc
    12541 gcctcagcag cagatgcacc agatactgga tcagctaacc aagggaatgg gaagacaact
    12601 tgatccccaa accatgatgt tgttccaaat agaccaaagg ctttcttgat accttcgtag
    12661 agccatacgg acccgtaaag gacacgcatt ggcacagacc agagaagatt tccttttcct
    12721 gaagtatgac ctccaaaaat atttcgctta ttctgaatat caaagaattc atgtcgaaca
    12781 taggaaccca tgtagaagaa actacggatg gtaaagaagt agagtaagtt taccatgtgt
    12841 ttgacagcca ttgccaggaa acctgacatg tggtatttgt ccatcaagaa ggctactccg
    12901 tagcgtgctc caatagatac cataaaccca tcatatttac ctttgtagct atgtttttcg
    12961 ccacctttga ttgctgcaat aatattactt gccgcagtat gacctgtctg ttcagctgct
    13021 tgtacaatct gtggagttgg ttttccttct gattcttcaa agtaaaccaa atcaccagct
    13081 acatagacat tttctttgcc cttagcttcc atgaattcat tggctaccaa acgacctgca
    13141 cgtgcttttt caataccaaa ttcacttgcg tctgtattag cttgaacacc agctgtccaa
    13201 atagaggtat aggtaggaat ttgacgacct gatgaaagtg tcaagctatc ttcttgtaca
    13261 cttgctacac catcgccaag taccaattca acaccttttt tctcaaggta tttacgtgcc
    13321 ttgacttgct ctttttcagt aaccatagcc aagatatttg gcgttgcttc gacaaccttg
    13381 agagagaatt cttttggatc caacttgaac tcacgcgcca aaattggtac ccagtcaatc
    13441 aactcaccga tcatctcaat acctgtgaag ccagcaccga taacggtaaa tgttagaaga
    13501 gcgcgacgtt tggcttcatc atgctcacgc atggcacgat agcaagcatc aatcatgtgg
    13561 tcatgcaaac gttctgctgc ttcgatagac caaagtgtaa aaccgtgttc tttaacacct
    13621 ttcacaccaa agtcattagc ctcaccaccc attgcaagga gcaggtaatc aaaatccaga
    13681 gtttggtgtt ccgcaactac ttgtttctta tcgtagtcaa tctcaacaac cttatctgtt
    13741 accaattgaa cctttggata ttttttgaag atacgttgaa ggtcatactt gattgcattg
    13801 gcttctacac gcccagccgc aacttcatgc aactctgtca tataggtatg gaaagagttc
    13861 ttatcaatca aggtaaccgt tacatcttga tccttcttaa aagtttttcc tagcaatcga
    13921 gctgctgcaa tccccgcata accagcaccg acaatcacaa tatttttcgt cacaatgttt
    13981 cctccttgtg aaaatcaaaa caaattacat gttcccatta tatcgtattc caagatagtt
    14041 gacaagcgaa tttcaataat tagtaatata cacaaacaaa acttgccata gagaacaaaa
    14101 acaagtatga tagtaaaata gacaatcgac tagaaagagt tttttctcta cacacatgaa
    14161 ttctaaacgt caaacactta actttattac gatgctggca gctcaggcag ttgtcatttc
    14221 tttgattgaa cgactcatca cccccccctt cgcctttgct ccaggtgcca agctaggact
    14281 gggaaattta attagcttga tcgctatctt taccctccct acaaaggata gcctaaaggt
    14341 tgtcgcacta cgcttgctca tctcaacctt tctgggaggc accttttcaa ccttcctcta
    14401 tggctttgcc ggaactactt tgagttatgt aggaatgctc tctgccaagc agctcggtcc
    14461 aaaccgtgtc agtcctattg gaatttctat tctgggcggg atgttgcaca atcttggtca
    14521 gcttcttgtt ttcgctacca ttgcccgttc tttctatgta ctgaactacc tgccaatcct
    14581 cgcttttaca ggaattttat caggcttatt ggtcggactg gctgctacct acctcctcca
    14641 aaaggtcgga cctttacgtc actatcatca acaagtctta gcagaatgga aataaatctc
    14701 cctaggtcaa ctaaggagat tctttttata gtccgcacca ctttttcatt gccaataata
    14761 atttccccat aatcctggtg tcacaagtaa aatgagccac ctcatgtaaa caccacttat
    14821 aaaatccatg gtaataaaaa acaatgaagc tttcaagaag agaaaaaatc aggttctttg
    14881 cgtgttttag tcgtacattt tctttctttt gtgctacaat atcttcatct tttatttttt
    14941 tgagaaaagg tagaattatg tcaccattta ggatcaaact ttctcccagt cagcgaatca
    15001 ttatcagttt cttattcgtg attctgactg gatcaatttt actaagtctt cccatctcac
    15061 aaattagcac ctctacagca agttattggg atcatctctt cacatctgtc tctatggttt
    15121 gtgtgacagg actatttacc aaagccgttg ctgaaaccta ttctactttt ggacagatta
    15181 tctgtatgat gctaatccaa attggtggtt tgagcttgat aggatttatc ggtctctttg
    15241 ctctacgcgg tggtcgtaaa atgaacttca tcaatatggc gaccttacaa gaggctctaa
    15301 accgatctga cacaaaatat tttcgtaact tcctcaaatc agcttttggt tttaccttgg
    15361 cggtcgaagc ctttggagcc ctcttactgt cctttcattt tgtacctgaa tttggatggg
    15421 caagaggttt atttacctcg attttcgtag ctatatcagc cttttgtaat gctggttttg
    15481 ataattttgg ctcaactagc atcatgcgct atgtggataa tcctctgatc aacataacat
    15541 tagccagtct cattattatg ggaggtcttg gattctcggt ttggtttgac cttcagacac
    15601 aaatcgggca aaaacgtagc ctacgaaaac tagggttcca tacaaagatt gttctaggtc
    15661 taacagctac tatactaacc ctcggaactc tgacaacctt actcaccgaa tggaacaacc
    15721 cttctactat cgggcaacta tcatttggtc ataaattatt agccagcttt ttccagacgg
    15781 ttaccatgcg aaccgctggt tttgccagta tcgactacac gaaagctgaa ccaatcaccc
    15841 tcttgctcta tatctttcag atgatgcttg gcggggcccc aggtggaaca gccggcggta
    15901 ttaaaataac cgccttccta accttagtac tctatgctcg tagtgaaatt ctcggcctcc
    15961 ctcataccaa ctttatggga cgaaccattg ataacctcag catccgcaaa gcttttgcga
    16021 cattctcagt cttcctgctt atgtttatca taggactctt cgcacttgcc ttaacagatg
    16081 accgacaacc acttctattt ttaatgttcg aggtcatgtc cgcattagcc actgtgggtg
    16141 ttacagcaaa tctgactcca agtctaacca tggccggtca agcagtcatt atggcgctca
    16201 tgttcttcgg ccgtatcggt ccactttcta ttctcgcaag cctttctgtt cgaaaattat
    16261 ctaaaaccga aagtcttcaa tacgcaaaat catctatgct tgtttaaaag gagaaatcat
    16321 gccaaactat actatcggaa ttctcggcct gggagttttt ggtactacca ttgcaaaaac
    16381 attacacaat tacgattgca atatcattgc tattgataat catgagcaac gtatcaatca
    16441 tctagagcct attctcacgc gcggtattgt cggagacatc accgatcgct cgctcctacg
    16501 tgcagcagga atcggtaact gcgatgctgt tgttgtagct actggcgaaa acttggaatc
    16561 cagtgtcctt gctgttatgc atagcaaggt cctaggcgtt cccatggtca ttgccaaagt
    16621 caaaggaaca actgcgaaag aagtccttct ccgtgttggt gctgacaagg ttatttcccc
    16681 cgaacgcgaa actggtattt ccctagcaaa acaattactc caccgcgata caaccagcct
    16741 ttttgagctt gacggtaatg tttccattgt tgagtttcac ccgccagtaa aatggattgg
    16801 caaaacactc ggcgaattaa aactccgcca acactataaa ctcaatatta tcggttaccg
    16861 aagtggcgaa aatcaggaat taaacatcca actaactcct gactatgtct tcaaatctaa
    16921 cgaactcatc ttagcagtaa cagaccataa cactgtcgat cattttgaag agctgacaaa
    16981 ttaatactca atg
//
LOCUS       DASFQS010000050        16853 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.050, whole genome shotgun sequence.
ACCESSION   DASFQS010000050 DASFQS010000000
VERSION     DASFQS010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16853
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.050"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(20..955)
                     /locus_tag="U1041_001339"
     CDS             complement(20..955)
                     /locus_tag="U1041_001339"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HEM4768449.1"
                     /translation="MSKFLVFGHQNPDTDAIASSYGWAHLEREVFGRDAEAVALGTPN
                     EETAFALDYFGVTAPRVVESAKAEGVSQVILTDHNEFQQSIADIKDVEVAAVIDHHRV
                     ANFETANPLYMRLEPVGSASSIVYRAFKENGVTPPKEVAGLLLSGLISDTLLLKSPTT
                     HATDPQVAAELAEIAGVNLEEYGLALLKAGTNLASKSAEELIDIDAKTFGLNGNDVRV
                     AQVNTVDIAEVLERQAEIEAAMTAASAANGYSDFVLMITDIVNSNSEILALGSNMDKV
                     EAAFNFKLENNHAFLAGAVSRKKQVVPQLTEAFNA"
     gene            1094..2791
                     /locus_tag="U1041_001340"
     CDS             1094..2791
                     /locus_tag="U1041_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEM4768450.1"
                     /translation="MKFSDYTYVRPDYEAIKAQFTDLTDQLAQASDLETTRTLVAAVT
                     KLLNLIDTQYNLWMIRHTIDMNDEFYNEETKFWNEYSPLFEELTTNYYRVIVQTPYKA
                     ELSDILPETFFMQAENKLKTFSSAVIPLFQKENELTDEYSKLIAGAEIDFQGQTYNLA
                     QMGPFGQSTDRDVRKAASAATTAFFESKEADFDRVYDELVKVRTEIAHKLGFKDYVEY
                     GYLKMNRFDYNRDMVKVYREEILKHIVPIVQNLRQRQAKRLQVPSLKHYDLNLEFLDG
                     NAVPQGDPDFIVSQAQDMYRELSAETGEFFDFMIEHELLDLVAKPGKNSGGYCTYIPD
                     FKSPFIFSNFNGTSGDIDVLTHEAGHAFQVYRSRWIQSPEVVWPTYETCEIHSMSMEF
                     MTWPWMDRFFKEQVDKYKFTHLASALLFLPYGVLVDHFQHEVYERPEMTPAERKATWK
                     KLQDLYLPDRDYSESVALNRGIFWYRQGHIFASPFYYIDYTLAQVCALQFWKRTQVDH
                     DENAWEDYIRICDLGGTKSFLQVVEAANLQSPFKEGALESTAKAAADWLNAVKDDEL"
     gene            complement(2820..3167)
                     /locus_tag="U1041_001341"
     CDS             complement(2820..3167)
                     /locus_tag="U1041_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768451.1"
                     /translation="MATFTQHTVPECPFVTTQSVLSGKWSILLLHHIEEGPIRFNEMH
                     RRLTGISQATLTKQLRQLEEDGLIVRKVYAQVPPKVEYELSEIGQEFKLVLEQIEVFG
                     DKYIEFVKAKKSE"
     gene            3415..3954
                     /locus_tag="U1041_001342"
     CDS             3415..3954
                     /locus_tag="U1041_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009732451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4768452.1"
                     /translation="MKNILFIVGSLREGSFNHQMAKQAERILEGQATVSYLNYKEIPL
                     MNQDFETPVLPAVQAARDAIMAADAIWIFSPVYNFAIPGTVKNLIDWLSRALDLSETR
                     GPSALQDKIVTVSSVANAGHEPMFASYHALLPFVRMQVVGEFTGTTVNPEAWGTGQLV
                     LSEEAIAGLQAQAQALLEA"
     gene            4121..4741
                     /locus_tag="U1041_001343"
     CDS             4121..4741
                     /locus_tag="U1041_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEM4768453.1"
                     /translation="MKLYYIIDAYCGWTYGFNHIFTKFMQDHPDIEIEVINGGLFVGD
                     NKKKMVDFKQAQTINKQIESYYQMTFGDNYNQLFKDKDFTMDSLGPARAYSVLKNYVE
                     TSNHAQLTLDIQALFFEDGLDLSQADSYTSLIGSYQLPTKAMEELASNLKQPESLHPD
                     FIKAYEMGVTSFPTLLLEKDGNFFNLINKVRTVDDLEKNFQAAITQ"
     gene            4757..5575
                     /locus_tag="U1041_001344"
     CDS             4757..5575
                     /locus_tag="U1041_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HEM4768454.1"
                     /translation="MEKHYKLQNGTELHIFTNDESSFMVTATLIIKNGKALLVGSGFK
                     QSEGERIVRYLQDVQLTLEKIFIIQGDPDYYFALEPIKKSFPEAIVYATSYVIDHILK
                     TVSKKLQVWGDSLGDQAPKNIILPALIQESTLEFEGDKWEFFGSEPSQINLWNAETKT
                     IIGGINTFNQIHLFLADSQTTEQLKAWQDRLKDMKALDASLIIPGHADSEGSFDSQAL
                     DFSIAYIEVAIKLKKEVKDSATFIAKMKEKFPNLRNEAVLELSAKVLTGEIPWG"
     gene            5579..5980
                     /locus_tag="U1041_001345"
     CDS             5579..5980
                     /locus_tag="U1041_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM4768455.1"
                     /translation="MSKNQLYKNILDETYLATAQGRIEDFKSHLAADISWTEAAGFPY
                     AGTYIGPDEVIENVHARLGSEWTNYSATPVDYAFSGNRVMVYGYYKGTYNLTEKSFQA
                     DFVHIYDFNAENKITHFIQIVDSALVEKAMR"
     gene            6081..6926
                     /locus_tag="U1041_001346"
     CDS             6081..6926
                     /locus_tag="U1041_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4768456.1"
                     /translation="MYNSQFELGLVALNVRNLKLQSLFYQQVLGLQVLTENSKQIDLG
                     VGKNILIRLIQTEQKGEVSHSYGLYHLAIVLPSREDLGTIFRHFIDNKIPLQGASDHG
                     YSEAIYLADTEGNGIEIYRDLPQDSWDVRPDGRIVGITEPMDAETIYALGKKADVSYQ
                     MPLGSRMGHIHLSVRESAASSRFYQEVLAVEDKFSVPSAAWLASGDYHHHLAVNEWGG
                     KELQTRTEGMPGLAYYTVIYSNPEFFEATLNRAIAANLNLQRLDNSVAFVDVDGIKTK
                     LCIID"
     gene            complement(6980..7771)
                     /gene="pflA"
                     /locus_tag="U1041_001347"
     CDS             complement(6980..7771)
                     /gene="pflA"
                     /locus_tag="U1041_001347"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HEM4768457.1"
                     /translation="MMTEIDYRKVTGLVHSTESFGSVDGPGVRFVVFMQGCHMRCQYC
                     HNPDTWDLVNPAATERTAEDVLNEALRFRMFWGKEGGITVSGGEATIQIDFLIALFTL
                     AKEKGIHTTLDTCALTFRSTERYLEKYSRLMEVTDLVLLDIKEINSDQHRIVTGHSNK
                     TILECARYLSNIGKPVWIRHVLVPGLTDRDEDLIELGKFVKTLTNVERFEVLPYHNLG
                     EFKWRELGRPYPLEGTKPPTKARVENAKALMETESYQDYLNRIKG"
     gene            complement(7892..9229)
                     /locus_tag="U1041_001348"
     CDS             complement(7892..9229)
                     /locus_tag="U1041_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM4768458.1"
                     /translation="MEDPGSQTIYLQLLILFLLTLFNAFFSASEMALVSLNRSRVEQK
                     AADGEKKYIRLLQVLENPNNFLSTIQVGITFISILSGASLANDLGAVFAKWMGNSTTA
                     QTAGYWLALAMLTFVSIVLGELYPKRIAMNMKENLAVVTAPVIIFLGKIVSPFVWLLS
                     AATNLISRITPMNFDDADEQMTRDEIEYILTKSEKTLDAEEIEMLQGVFSLDELMARE
                     VMVPRTDAFMVDIEDDTATIMAAILKQNFSRIPVYDGDKDNIIGLIHTKKILSEAFSN
                     GFDNLNIRRIMQEPLFVPETIFVDDLLTSLRNTQNQMAILLDEYGGVAGLVTLEDLLE
                     EIVGEIDDETDKTEIFVREIADNTYIVQGNMTLNDFNEHFEMELESDNVDTIAGYYLT
                     GVGTIPSQDEKVSFEVDSKDHHLVLINDKVKNGRVTKLKLLITPLEKEETDKD"
     gene            9362..10141
                     /locus_tag="U1041_001349"
     CDS             9362..10141
                     /locus_tag="U1041_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768459.1"
                     /translation="MIISMKNVHYKRQGKTILEDINWEFRKGERWAILGLNGAGKSTL
                     LRILMAEFWKTSGDLTVLGVEFGRGDIPSLRTKIGVVGSFLAERFPIDLTAEQIVLTG
                     KYKSSILYREYGRAELDEAIDMLKTIKAEHLIGRAYASLSQGERQLLLIARSLMEEPA
                     ILILDEATVGLDLLARERLLHHIDYICQLPTAPAIIYVTHHAEEITDNFTHVLLLKDG
                     KVLAQGPKEEILTPELLSDFYGNQVELIDLGEGRLFIKPIL"
     gene            complement(10157..10711)
                     /locus_tag="U1041_001350"
     CDS             complement(10157..10711)
                     /locus_tag="U1041_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4768460.1"
                     /translation="MLRPLHMAHAFLDEILTDQDLAVDATMGNGHDTLFLAQRAGKVV
                     AFDIQEQALTTTAEKLEKAGLTNAQLVLTGHENLDQYVDECKAAIFNLGYLPSADKSV
                     ITLPATTLQAIEKVLNRLVVGGRLAIMIYYGHEGGALEKDAVLDFISQLDQTVFTTML
                     YKPLNQVNTPPFLVMVERLKSSSN"
     gene            complement(10721..11239)
                     /locus_tag="U1041_001351"
     CDS             complement(10721..11239)
                     /locus_tag="U1041_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4768461.1"
                     /translation="MDRRIAKTKRAIFQAFLTLLNDKGYDHMRVQDVIDLADVGRSTF
                     YAHYASKEALLEELCHDLFHHLFTGREDADVKTLLVHIFKHFRTNQDRVASLLLSRNA
                     YFLRELEAELKHDIFPKVAEDYMQDKRNLPENLLVHFVVTTFVETVSWWLQQRKKVDE
                     ATLTDYFIRLLT"
     gene            11361..12179
                     /locus_tag="U1041_001352"
     CDS             11361..12179
                     /locus_tag="U1041_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM4768462.1"
                     /translation="MSSSKNTFIAFLLNLSFSIIEFIFGWLFGSSAILADAVHDLGDA
                     LAIGSSAIMQTYANKPADRVYPFGYKRWNILAALLTSSILIIGSSLILVENIPNLFHP
                     NPVNQDGMLVLGIIAIIINLLASRIVKNGHSHNESILSLHFLEDILGWLAVILVSIIL
                     QFTDWYFLDPLLSLGIAIFILAKALPKAWNNVKILLETSPQGVNLEEVKGVLLALENV
                     HEITQLNVWTMDGYEHCATVTVKLTNPAVADKTKAKIRNSLITFGIIQSTIEIL"
     gene            12231..12875
                     /locus_tag="U1041_001353"
     CDS             12231..12875
                     /locus_tag="U1041_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEM4768463.1"
                     /translation="MKTIILFFLGASIGSFLGLVIDRFPEQSIIAPSSHCNACKRQLK
                     AWDLIPVLSQLSTKSKCRYCKAKIPYWYLGLEFLAGLVVLLCHFQVLNLTETILILAG
                     LVLTIYDIKHQEYPFAVWLVFTFIALVLSQLNWLFCGFLLLAYLTEKWQINIGSGDFL
                     YLASLALICGFTELLWIIQISSLLGLLVFAIFKPKSIPYVPLLFLSSIPIILCI"
     gene            12983..14443
                     /locus_tag="U1041_001354"
     CDS             12983..14443
                     /locus_tag="U1041_001354"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEM4768464.1"
                     /translation="MTLFKDDSLTLHTDLYQINMMQVYFDQNIHNKHAVFEVYFRSQP
                     FKNGYAVFAGLERVVNYLNNLSFSQTDIDYLTELGYPQDFLDYLSQLEMTLTVRSAKE
                     GDLVYANEPILQIEGPLAQCQLIETALLNIVNYQTLIATKARRIKAVIEDEPLMEFGT
                     RRAQEMDAAIWGTRAAFIGGASATSNVRAGKIFGIPVAGTHAHALVQTYGDDYKAFKA
                     YAKTHHDCVFLVDTYDTLRIGVPAAIKVAKEMGDKINFKGVRIDSGDMAYISKKVRQQ
                     LDDAGFTDAKIYASNDLDENTILNLKMQKAKIDVWGVGTKLITAYDQPALGAVYKIVS
                     IEDEDGNMRDTIKLSSNAEKVSTPGKKQVWRITSKEKGKSEGDYITFADTDVTQMDNI
                     YMFHPTYTYINKTIENFDARPLLVPIFEKGKQVYELPSLAEIQTYANQEFDKLWDEYK
                     RVLNPQLYPVDLAQDVWDNKMNLINRIRKQTQTKSI"
     gene            14456..15280
                     /gene="nadE"
                     /locus_tag="U1041_001355"
     CDS             14456..15280
                     /gene="nadE"
                     /locus_tag="U1041_001355"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HEM4768465.1"
                     /translation="MTLQETIIKELGVKPSIDPKEEIRRSIDFLKDYLKKHPFLKTYV
                     LGISGGQDSTLAGRLAQLTMEEMRAETGDDSYQFIAIRLPYGVQADESDAQAALAFIQ
                     PDVSLTINIKESTDAMVAAVNANGLAMSDFNKGNAKARMRMIAQYAIAGERKGSVIGT
                     DHAAENITGFFTKHGDGGADILPLFRLNKRQGKQLLAELGADEKLYLKVPTADLEEDK
                     PGLADEVALGVTYNQIDDYLEGKIIDPQAQTIIEGWWNKTAHKRHLPITIFDDFWQ"
     gene            complement(15532..16707)
                     /gene="trpB"
                     /locus_tag="U1041_001356"
     CDS             complement(15532..16707)
                     /gene="trpB"
                     /locus_tag="U1041_001356"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003005924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEM4768466.1"
                     /translation="MAEKGYFGQFGGSFVPDQIQVLLDQLEETFETYRNNPEFVAEYQ
                     GYLKDYAGRETPLYFAESLTKELGGAKIYLKREDLNHLGSHKLNNVLGQILLAKRMGK
                     TRVIAETGAGQHGVATAAVAARFGLGCDVYMGAEDVKRQRLNVFRMEMMGARVHAVTD
                     GTQTLKEAVDAAFGAWMADLDAFYVLGSAVGPHPYPTIVHEFQKIISLESRRQILEKE
                     GCLPDYVIACVGGGSNAIGAFSQYLPDESVKLIGVEAAGKGVDTELHAATMTKGTVGV
                     VDGMKTISLFDENGGVAPVYSISAGLDYPGVGPEHAHYKETGRVNYVAATDDEAVNAL
                     LTLSRTEGILPAIESSHAIAEAIRLAPQLDKDKIIIINVSGRGDKDVAAIADYLESR"
BASE COUNT         4979 a         3897 c         3245 g         4732 t
ORIGIN      
        1 acccgaaggt gctaggtatt tatgcgttaa acgcttcagt taattgtggt accacttgtt
       61 tcttacgtga aacggcaccc gcaaggaagg catggttgtt ttccaacttg aagttgaagg
      121 ctgcttctac cttgtccatg ttgctaccaa gggcaaggat ttcagagttt gagttaacga
      181 tgtctgtaat catgaggaca aagtctgagt agccatttgc tgctgatgct gctgtcatag
      241 ctgcttcaat ctctgcttgg cgttccaaga cttctgcaat atcaacggtg ttgacttggg
      301 ctacacggac gtcattgcca ttcaagccaa atgttttggc atcgatgtca atcaattctt
      361 ctgctgactt gctagcaaga ttggtacctg ctttcaagag tgccaagccg tattcttcca
      421 agttcacacc agcaatttct gccaattcag ctgcaacttg tgggtctgtt gcgtgagtgg
      481 ttggcgattt gagcaagagt gtatctgaaa tcaaacctga taggagaagt ccagctactt
      541 cttttggagg cgtcacacca ttttctttga atgcacggta aacgattgaa gatgctgaac
      601 ctactggctc caaacgcatg tacaatggat ttgccgtttc aaagtttgcg acacggtggt
      661 ggtcaataac agctgccact tccacatcct tgatgtctgc gattgattgt tggaattcat
      721 tgtggtctgt caagatgact tgactaacgc cttctgcctt agcagattca accacgcgcg
      781 gtgcagtaac accaaaatag tcaagcgcaa acgctgtttc ttcatttggc gttccaagag
      841 caactgcttc cgcatcacga ccaaatactt cgcgctccaa atgagcccaa ccgtatgatg
      901 atgcaatagc atctgtatca ggattttggt gaccaaaaac taaaaattta gacatgtcta
      961 caacctcatt ttttctaata atcttctaca ttttaccata aataaaagga cttgtgaaca
     1021 tggacgggtc aggatttgcc aaacgttttc aaaaagagta agatagaagg tagtaataca
     1081 aaaggagaaa gatatgaaat tttcagacta tacctatgtc cgtcccgatt atgaagccat
     1141 taaggctcaa tttactgacc tgaccgacca gttggctcaa gcaagtgact tggaaacaac
     1201 tcgtacactt gtggcagccg ttaccaaatt acttaacctg attgataccc agtacaacct
     1261 ctggatgatc cgtcatacta tcgacatgaa cgatgagttt tacaatgaag aaaccaagtt
     1321 ttggaatgaa tattcgccac tttttgaaga attgaccacc aactactacc gtgtcattgt
     1381 ccagacacct tacaaggctg agctttcaga cattttacca gaaactttct tcatgcaggc
     1441 tgagaacaag ctcaagacct tctcatcagc tgtcattccc ttgttccaaa aggaaaatga
     1501 attgaccgat gagtacagca aactgattgc tggtgcagag attgatttcc aaggacagac
     1561 ttacaacttg gcacaaatgg ggccattcgg tcaatcaacc gaccgtgacg tccgcaaggc
     1621 tgcttctgct gccacaactg ccttctttga aagcaaggaa gctgactttg accgtgttta
     1681 cgatgaattg gtcaaggtcc gcacggaaat cgcccacaaa ctcggcttca aggactatgt
     1741 ggaatacggc tacctcaaga tgaaccgttt cgattacaat cgtgatatgg tcaaggtgta
     1801 ccgtgaagaa atcctcaaac acatcgtacc aattgtacaa aatctgcgtc aacgccaagc
     1861 caaacgcttg caggtgccaa gcctcaaaca ctacgacctc aatcttgagt tcttagacgg
     1921 caatgcggtc ccacaaggtg accctgattt tatcgtcagc caagcccaag acatgtaccg
     1981 tgaattgtcc gcagaaacag gcgagttctt cgatttcatg attgagcatg aactcttgga
     2041 cttggttgca aaaccaggca aaaacagcgg tggctactgt acctatattc ctgacttcaa
     2101 gagcccattc atcttctcta acttcaacgg aaccagcggt gatattgatg tcttgaccca
     2161 cgaagcaggt cacgccttcc aagtctatcg ttcccgttgg attcaaagtc cagaagttgt
     2221 ttggccaacc tacgaaacct gtgaaatcca ctccatgtct atggaattta tgacctggcc
     2281 ttggatggac cgtttcttca aggaacaagt cgataaatat aaatttactc acttggcaag
     2341 tgcccttctc ttcttgcctt acggtgtctt ggtagaccac ttccagcacg aagtctatga
     2401 acgcccagag atgacaccag cagaacgcaa ggcaacttgg aaaaaactcc aagacctcta
     2461 cttgccagac cgtgactatt ccgagtcagt agccctcaac cgtggtatct tctggtaccg
     2521 tcaaggtcat atatttgcca gtccattcta ctacatcgac tataccttgg ctcaagtctg
     2581 cgccctccaa ttctggaaac gcacgcaggt ggatcacgat gaaaatgctt gggaagacta
     2641 catccgcatc tgtgatttgg gtggcaccaa gtccttcttg caagtggttg aagccgcaaa
     2701 cctccaatca ccgttcaaag aaggtgccct cgaaagcacc gccaaggctg ctgccgattg
     2761 gttaaatgca gttaaggatg acgaactata acagacaaaa atctgaatga gattcaaact
     2821 cattcagatt tttttgcttt gacaaattcg atgtacttat ccccaaaaac ttcaatttgc
     2881 tccaaaacca atttaaattc ctgaccaatc tcgctcagtt catattctac ttttggcgga
     2941 acctgtgcat aaaccttgcg gacaatcagg ccgtcctctt ccaactggcg cagctgcttg
     3001 gtcagggttg cttgggaaat cccggtcaat cgacggtgca tttcattaaa ccgaatggga
     3061 ccttcttcga tatgatgtag taataagata ctccatttcc cagataagac actctgagtg
     3121 gtcacaaaag gacactccgg aaccgtatgt tgtgtgaaag ttgccataat ttctccttta
     3181 ttttcccttg atattacaca ttacttcaca aaaagatagt gactattcaa aaaaaacgta
     3241 cttgttttat ttttagtacc tgatacaata ataccataaa ctgcgagagc aggaaagtat
     3301 tttctcaaaa ggagtgatac aatgaacatc aattgcacta aataatacaa aggagtacct
     3361 atgtcactaa tctcagtttt caaaaatata tttacaaaaa aggaagaaaa aaacatgaaa
     3421 aacattttat ttatcgtcgg ttcactacgt gagggttcat tcaaccacca aatggctaaa
     3481 caggctgaaa ggatcttaga aggtcaagca actgtatctt atcttaacta taaagaaatc
     3541 ccgcttatga accaagattt tgaaacacca gtcttgccag ccgtccaagc tgcacgcgat
     3601 gcgattatgg ctgcagatgc tatctggatt ttctcaccag tttacaactt tgctattcca
     3661 ggtactgtga agaacttgat tgactggctc agccgtgccc tagacttgtc agaaacacgt
     3721 ggcccatctg cactacaaga caaaattgtt actgtatcat ctgttgccaa tgctggacac
     3781 gagccaatgt tcgctagcta ccatgcactc ctaccgtttg ttcgtatgca agtcgttggt
     3841 gaatttacag gtacaactgt caatccagaa gcatggggaa ctggacagtt ggtattgtca
     3901 gaggaagcca tcgctggtct gcaagctcaa gctcaagctt tgttagaagc ttagactcta
     3961 caggtcaata tacatccttc tatgaccttt atcgagttga agatgataaa attgcagaac
     4021 tctgggatct tgttgtacca atcgaggaaa attccaaaac tgtcaatagc aatctaaatt
     4081 ctaatcaaaa accaagaaaa taagatggaa gaaaattaaa atgaaactat attacatcat
     4141 cgatgcttat tgtggttgga cctacggctt taaccacatt ttcacaaaat tcatgcaaga
     4201 ccatcctgac atagaaatag aggtcattaa cggaggcttg tttgtcggag ataacaaaaa
     4261 gaaaatggtt gatttcaagc aggcacagac catcaacaaa caaatcgaaa gctattacca
     4321 aatgactttt ggcgataact acaatcaatt gtttaaggat aaggacttta ccatggactc
     4381 ccttggtcct gctagagcct actcagtctt gaaaaactat gttgagacat ctaaccatgc
     4441 tcaactaaca ttagacattc aagccttatt ttttgaagat gggttagacc tcagtcaagc
     4501 agacagttac accagcctaa tcggtagcta tcagttacct acaaaggcta tggaagaact
     4561 agcaagcaac ttgaaacaac cagaaagtct acacccagac tttatcaagg cttatgaaat
     4621 gggggtaacc tctttcccaa ccttgttact tgaaaaagac ggaaacttct ttaatcttat
     4681 caataaagtt cgcacagtag acgatttgga aaaaaatttc caagcagcta ttacacaata
     4741 gaaagggcaa ctatttatgg aaaaacatta taagctacaa aatggaacag aattacacat
     4801 ctttacaaat gacgaatcaa gttttatggt tacggcgacc ttaatcatta aaaatggcaa
     4861 ggctctcctt gtaggttcag ggtttaaaca atcagaagga gagcgaattg ttcgctatct
     4921 acaagacgtg caactgacat tagaaaaaat ctttatcatt caaggggatc cagactatta
     4981 ttttgctctt gagcctatca aaaaatcatt cccagaagcc attgtctatg caacgtctta
     5041 tgttatcgac catattttaa aaacagtatc aaaaaaatta caggtatggg gagactcttt
     5101 aggtgaccaa gctcctaaaa atattatttt accagcgctc attcaagaat ctacattaga
     5161 atttgaaggt gataaatggg aattttttgg tagtgaacca agtcaaatca atctttggaa
     5221 tgcagaaacc aaaaccatta ttggcggtat caatacattt aatcaaattc atctcttctt
     5281 agcagattca caaactaccg agcaattgaa agcctggcaa gatcgattaa aagatatgaa
     5341 ggcactggat gcatctctca ttattccagg tcatgcagat agtgaaggtt catttgattc
     5401 tcaagcactt gatttttcaa tcgcctatat tgaagtagca atcaaattaa aaaaagaagt
     5461 caaggactca gctactttta tcgctaaaat gaaagaaaaa ttccctaatc ttcgtaacga
     5521 ggcagtcttg gaattgagtg ctaaagtctt aaccggtgaa ataccatggg ggtaatgtat
     5581 gtcaaaaaat caattatata aaaatatttt agatgaaact tatctagcta ctgcacaagg
     5641 tcgaatagaa gatttcaaga gccatttggc tgctgatatc tcttggacag aagctgcagg
     5701 atttccctat gctggtacct atatcggtcc agatgaagtg attgaaaacg tccatgcaag
     5761 actaggttct gaatggacca attatagtgc cacacctgtt gattacgcct tttcaggaaa
     5821 ccgtgtcatg gtttatggct actacaaggg gacctacaac cttactgaaa aatcctttca
     5881 agcagacttt gtccatattt acgattttaa tgctgaaaat aaaattacac actttatcca
     5941 aatcgtagat agcgcacttg ttgagaaagc tatgagataa aaatcaattt tcaaaagtct
     6001 attcgtcaca tattcttcgc caaaagatac taagtaactc gaaaattcct ataaattgta
     6061 tccgaaagtc aggtatttcc atgtacaatt cccaatttga actgggccta gttgccctca
     6121 acgtccgcaa tctgaaactc caaagcctgt tttaccagca ggtattgggc cttcaagttc
     6181 tgactgaaaa ctctaaacag attgacctag gcgttggaaa aaacatcctt attcgcctga
     6241 ttcaaacaga gcagaaaggc gaagttagcc acagctacgg actctaccac ttagccattg
     6301 tcctacctag ccgtgaggac ctagggacca ttttccgcca ctttatcgac aataagattc
     6361 ccctccaagg ggccagcgac cacggttaca gcgaagccat ttacctagcc gacaccgaag
     6421 gtaacggcat cgaaatttac cgcgacctcc cgcaagactc ttgggatgtc cgcccggacg
     6481 gccgtatcgt cggcattact gagcctatgg atgctgaaac aatctatgct ttagggaaaa
     6541 aagctgacgt atcctatcag atgccgcttg gcagtcgcat ggggcatatt cacctgtccg
     6601 ttcgagaaag cgccgcttct agccgattct accaagaggt cctagctgtc gaggataaat
     6661 tctccgtccc atctgcagct tggctagcct caggcgacta tcatcaccac ctagctgtca
     6721 acgaatgggg aggaaaagaa ctgcagacgc gaactgaagg catgcctgga cttgcctact
     6781 acacagtcat ctattccaat cctgaatttt ttgaagcaac cttgaatcgt gccattgctg
     6841 caaacctaaa ccttcaaaga ctagacaata gcgtagcctt tgtcgatgtg gatggtataa
     6901 aaactaaact ctgcattatt gactaaaaaa cttagaaaaa gacttaccaa ctcagctatc
     6961 ttggtaagtc tttttaagtc tatcctttaa tcctatttaa gtagtcttga taggattctg
     7021 tttccatcaa ggcctttgca ttttccactc gggcttttgt cggtggcttg gtcccctcta
     7081 gtgggtaagg tcttcctaat tcacgccact taaattcgcc aagattgtga taaggcaaga
     7141 cttcaaaccg ctctacattg gtaagggttt tgacaaattt tcccagctca atcaagtctt
     7201 catctcggtc tgtcaagcca ggcaccaaga catgacgaat ccaaactggc ttaccgatat
     7261 tcgataggta acgggcacat tccaaaatcg ttttattact gtgacctgtg acaattcgat
     7321 gctgatcaga attaatctct ttaatatcca aaagcaccaa gtctgttact tccataagcc
     7381 gactatattt ttccaagtaa cgctctgtcg aacggaatgt tagagcacag gtatccaaag
     7441 tggtatggat acctttttct ttggccaagg taaagagagc aatcaaaaag tctatctgaa
     7501 tggtcgcctc gccaccagaa acagtaatac caccttcttt tccccaaaac atacgaaaac
     7561 gcagggcttc attcaagaca tcttctgccg ttctctcagt cgctgctgga ttgaccagat
     7621 cccaagtatc tgggttatga caatactggc aacgcatgtg acagccctgc ataaagacta
     7681 caaaacgtac ccctgggcca tcaaccgaac caaaactctc tgttgaatga accaaacctg
     7741 tcactttacg ataatcaatt tctgtcatca tctcatcctc atcattttat aagactagta
     7801 tatcacaaaa atgaaaacgc ttctatcatt tactttcttt ctttcataac tatcatcttc
     7861 cgtaaaaaga aagctaaaag actaggttgc cctagtcctt atcggtttct tctttctcca
     7921 gtggtgtaat caagagtttt aattttgtta cgcgaccatt ttttacctta tcgttaataa
     7981 gaactagatg gtgatcttta ctatctactt caaaggaaac tttctcgtct tgactcggaa
     8041 tggtaccgac ccctgtcaga taataaccag caatcgtatc aacgttatca ctttccaact
     8101 ccatctcaaa atgctcattg aagtcattta aggtcatatt tccttggacg atataggtgt
     8161 tgtcagcaat ttctcggaca aaaatttctg tcttatcggt ctcatcatcg atttccccga
     8221 caatttcttc cagcaaatct tccaaggtaa cgagacctgc aactccacca tactcatcta
     8281 acaagatggc catttgattt tgggtatttc tcaatgatgt caacaaatca tccacgaaaa
     8341 tcgtttctgg aacgaagaga ggctcctgca taatgcggcg gatgttaaga ttgtcaaagc
     8401 cattactgaa agcttctgac aagattttct tggtatgaat cagaccaatg atattgtcct
     8461 tatcgccatc ataaacaggg atacgtgaaa aattctgctt gaggatggct gccatgatgg
     8521 ttgctgtatc atcctcaata tccaccatga aagcatccgt acggggaacc attacttcac
     8581 gtgccatcag ctcatctaaa gagaacacac cttgaagcat ttcaatttct tcggcatcta
     8641 aggttttctc actctttgtc aaaatatatt caatttcatc ccgtgtcatc tgctcatccg
     8701 catcatcaaa attcatagga gtaatacggc tgataagatt cgttgcagct gataataacc
     8761 acacgaacgg actaacaatt tttccaagga aaataatcac aggtgcagtg actactgcca
     8821 gattttcctt catattcatg gcaatccgct tagggtacaa ttcaccaaga acgattgaaa
     8881 cgaaggtcaa catagccagt gcaagccagt atcctgcggt ttgcgctgtt gttgaattcc
     8941 ccatccattt ggcgaatact gctcccaaat cattagccaa gctggcacct gaaaggatgg
     9001 agatgaaggt aataccgacc tgaatggttg atagaaaatt gttaggattc tctaaaactt
     9061 gaagcaagcg aatatatttc ttctcaccgt ctgcggcctt ttgttctact cttgaacgat
     9121 ttagagaaac aagcgccatt tcagaggctg aaaagaaggc attgaatagg gtcaataaga
     9181 ataaaattaa cagttgtaaa tagatggtct gactaccagg gtcttccatg atgttctcct
     9241 ataataaaat ttataacatt tccattatac cacaaattct aaaaattaac atatttcttg
     9301 ttataaatag tccctcatgt ctgtttatgt tacaataatc aaaaggaata ggagaacaac
     9361 tatgattatt tcgatgaaga atgtccacta taaacgacaa ggtaaaacta ttttagaaga
     9421 catcaactgg gaatttagaa aaggcgagcg ttgggctatt ttagggctaa atggggctgg
     9481 aaagtcaacc ctccttcgta ttttaatggc tgagttttgg aagacatctg gtgacctgac
     9541 tgttcttgga gtggagtttg gcagggggga tattcctagc ctacgcacta agattggggt
     9601 cgtcggttcc tttctagccg aacgatttcc tattgatttg acagctgagc agattgtcct
     9661 gactggaaag tacaaatcct ccatcctcta ccgtgaatac ggtcgagctg aattggatga
     9721 agccatagac atgctcaaaa ccattaaggc tgagcactta atcggtcggg cctatgctag
     9781 tttgtcacaa ggtgaacgcc aactcctgct gattgcccgc agtttaatgg aagaaccggc
     9841 tattttgatt ttggacgagg ctactgtggg cttagacctt ttggctcgcg aacgcctgct
     9901 ccaccacatt gactacatct gccaactccc aacagctcct gccattatct acgtcaccca
     9961 tcacgcagag gaaatcactg ataatttcac ccatgtcctc ctgctcaaag atgggaaggt
    10021 cttggcacag ggacccaaag aagagatcct gacacctgaa ctcctcagcg atttttatgg
    10081 caatcaggtg gaattgattg acttgggtga gggaagattg ttcattaagc cgatattata
    10141 aaaaacaaat ccagccctag tttgagctgg attttaatcg ttccaccatc accaaaaacg
    10201 gtggggtatt gacttggtta agcggtttgt aaagcatggt tgtaaagacg gtttggtcta
    10261 gctggctgat aaagtctaaa actgcatcct tctcaagagc tccaccctcg tgaccatagt
    10321 aaatcatgat agccaagcga cctccaacca ccaatctatt caggactttc tcaatggctt
    10381 gaagggtggt tgcaggcagg gtaatgactg acttgtccgc cgaaggtaga tagcccagat
    10441 tgaaaatcgc tgccttgcat tcatctacat actggtctag gttttcgtgt cctgtcaaaa
    10501 ccaattgggc attggtcaag ccagcttttt ctagtttttc agccgttgtg gtcagggctt
    10561 gttcctgaat atcaaaggcc acaacttttc ctgctcgttg ggctaaaaat agcgtgtcat
    10621 ggccatttcc catagtcgca tcaaccgcta ggtcctggtc tgttaatatt tcatctaaaa
    10681 aggcatgggc catgtgtaaa ggtctaagca tactttctcc tcaagttaat aatcttataa
    10741 aataatcggt caaggtggct tcatccacct ttttgcgttg ctggagccac cagctgaccg
    10801 tctccacaaa agtcgtcaca acaaaatgca ccagcaaatt ctctggaaga ttcctcttat
    10861 cctgcatgta atcttcggcc acttttggaa aaatgtcgtg tttcaactcc gcttccagtt
    10921 ctcttaaaaa ataggcattg cgggacaaca aaaggctggc aacacgatct tgattggtcc
    10981 gaaagtgttt gaaaatatga accaacaagg tcttcacatc cgcatcttca cgacctgtaa
    11041 acaagtgatg aaagaggtcg tgacaaagtt cttctaacag tgcttcctta ctggcatagt
    11101 gagcatagaa agtggaacgc cccacatctg ccaggtcaat gacatcctgc acgcgcatat
    11161 ggtcatagcc tttatcattt aataaggtca aaaaagcctg aaaaatagct ctttttgttt
    11221 ttgcaattcg tctatccatt tttcgtacat ttcaaacaat ttgttcagaa aaagacaaac
    11281 cgtttctctt gtttctagtt ttttggctca ttacagtaca taataaacct ataaacagta
    11341 taacacagaa agggaatctc atgtcatctt ctaaaaatac atttatcgct tttctcctca
    11401 atcttagctt ttctatcatc gagtttatct ttggctggct ctttggttct agcgccatct
    11461 tagcagatgc tgttcatgat ttgggtgacg ccctcgccat cggaagctct gccatcatgc
    11521 aaacctatgc caacaagcct gctgataggg tttatccctt tggctacaag agatggaata
    11581 ttttggccgc tctcttgact tctagtattc tgattatcgg ctccagcttg atccttgtag
    11641 aaaacattcc caatcttttc catcccaacc ctgtcaatca agatgggatg ttggtcctcg
    11701 gcattatcgc tatcatcatc aatttactcg cttcccgtat tgtaaaaaat ggccatagcc
    11761 ataatgaatc cattctcagc ttgcactttt tagaggatat tttgggatgg ctggcggtca
    11821 tccttgtttc catcattctt caatttactg attggtactt tctagaccca ttactctcac
    11881 tgggtattgc tatcttcatc ctcgccaaag ccctgccaaa agcctggaac aatgtcaaga
    11941 ttctacttga aacaagtccg caaggagtaa atcttgaaga agtgaaagga gtcctcctgg
    12001 ctcttgaaaa cgttcacgaa atcactcagc taaatgtctg gaccatggat ggatatgaac
    12061 attgcgcgac ggtgacggtc aaactgacaa atcctgctgt agcagacaag accaaagcaa
    12121 aaatacgaaa ttctcttatc acctttggta ttatccaaag caccatcgaa attttgtaaa
    12181 aaattttaaa aagcttcaca ttttccctgc ccaaatacga ataaataggt atgaagacaa
    12241 ttatcctatt tttccttgga gcttctatcg gctccttctt gggattggtc atcgaccgtt
    12301 tccctgaaca gtccattatc gccccctcta gtcactgcaa tgcctgcaag cgacagctca
    12361 aggcctggga cttaattcca gtcctatccc agctttcgac aaaatccaaa tgccgttact
    12421 gcaaggcgaa gataccttat tggtatctgg gactagaatt cttagctggt ctagttgtcc
    12481 tgctctgcca ttttcaagtc ctaaacctaa ccgaaaccat tctcatcttg gcaggactag
    12541 ttttgaccat ttacgacatc aaacatcagg aatatccttt tgctgtctgg cttgttttta
    12601 cttttatagc tctggtactc tcccagctca actggctttt ctgtggcttt ttactcttgg
    12661 cctatctgac tgaaaaatgg caaatcaata ttggttctgg tgactttctc tatctggcaa
    12721 gtttggcctt aatatgtgga tttacagaac tcctctggat tatccagatt agttccctcc
    12781 tagggcttct tgtcttcgcc attttcaaac ccaagtctat tccctacgta ccactccttt
    12841 ttctttcaag tattcctatc attctgtgca tctaaatcga gtttttctcg atttttttgt
    12901 tataatagaa ggcatattag agttctactc catcaaaata attggagtgc cttcttgatc
    12961 ggaaggcaaa aggagaaacg ttatgacact atttaaggat gacagtttaa ccctgcatac
    13021 cgacctttat caaatcaaca tgatgcaggt ctattttgac caaaacatcc acaataaaca
    13081 cgctgtattc gaagtctatt tccgttcaca accttttaaa aatggctacg ctgtatttgc
    13141 cggtttggaa cgcgttgtaa actacctcaa caatctcagc tttagccaga cagacattga
    13201 ctatctgaca gaactaggtt atccgcagga tttccttgat tacttgtccc aattggaaat
    13261 gactctcact gtccgttcgg ctaaggaggg cgacctggtc tacgctaacg aacccattct
    13321 tcaaatcgaa ggaccattgg cacaatgcca actaatcgaa actgccctct taaacatcgt
    13381 caactaccaa accctgattg ccacaaaagc tcgccgtatc aaggctgtca ttgaagatga
    13441 gcccttgatg gaatttggca ctcgccgtgc ccaagaaatg gatgctgcta tctgggggac
    13501 tcgagcagca tttattggtg gagcatctgc gacttccaat gttcgagctg gcaaaatctt
    13561 cggcatccct gtcgctggta cccatgccca cgccttggtt caaacatacg gagatgatta
    13621 caaggctttc aaagcctacg ctaaaaccca tcatgactgt gtcttcctcg ttgataccta
    13681 tgacacgctt cgtattggtg ttccagcagc catcaaggtt gccaaagaaa tgggagataa
    13741 gattaacttc aaaggggttc ggattgattc aggcgatatg gcctatattt ccaagaaagt
    13801 tcgtcaacaa ttagatgatg caggttttac agatgcgaag atttacgcat ctaatgacct
    13861 ggatgaaaat accatcctca acctcaaaat gcaaaaggca aaaattgatg tctggggagt
    13921 gggcactaag ctaattacag cttatgacca acctgccttg ggggctgtct acaagattgt
    13981 atctatcgaa gatgaagatg gaaatatgcg tgacaccatc aaactgtctt ctaatgctga
    14041 aaaagtctcc actcctggta agaaacaggt ttggcgcatc acctccaaag aaaaaggaaa
    14101 atcagaaggg gactacatca cctttgcgga cactgacgtc acacagatgg ataatatcta
    14161 tatgttccat ccaacttaca cctacatcaa taaaaccata gagaactttg atgcacgtcc
    14221 tctcctagtt cctattttcg aaaaaggaaa acaggtctat gaacttccaa gcctagcgga
    14281 aattcaaacc tatgccaatc aagaatttga taaactctgg gatgaataca aacgtgtgct
    14341 caacccacag ctctatccag tcgacttggc acaagatgtt tgggataata agatgaacct
    14401 catcaatcgt attcgcaaac aaactcagac caaatccatc taagaaaggt atgttatgac
    14461 cctacaggaa acaatcatca aagaattagg tgtcaagcca agcattgacc ccaaagaaga
    14521 aatccgtcgc tccatcgact ttctcaaaga ctatctgaaa aaacatccct ttttgaagac
    14581 ctatgtcttg gggatttctg gtggacaaga ttcgaccttg gctggtcgtt tggcccagtt
    14641 gactatggaa gaaatgcgag cggaaacagg tgacgattct tatcaattta tcgctatccg
    14701 cctaccttac ggcgtgcaag ctgacgagtc cgacgcccaa gcagccctag cctttattca
    14761 accagatgtc agcttaacca tcaacatcaa ggaatcaaca gatgccatgg tggctgcagt
    14821 caatgcaaat gggcttgcta tgtctgattt taataaggga aatgctaaag cccgcatgcg
    14881 catgattgcc caatacgcta tcgctgggga acgcaagggg tcggttatcg gaaccgatca
    14941 tgcagctgaa aatattaccg gtttctttac caagcacggt gatggtggtg cagatattct
    15001 gcccctcttc cgcctcaaca aacgccaagg aaaacagctt ctagctgaac tgggggcaga
    15061 tgaaaaactc tacctcaaag ttcctactgc ggacttggaa gaagacaagc caggtctggc
    15121 tgatgaagtc gctctcggtg ttacctataa ccaaatcgac gactatctcg aaggcaaaat
    15181 catcgatcct caagcccaaa ccattatcga aggatggtgg aacaaaacag cccataaacg
    15241 ccacctgcca atcacgattt ttgatgactt ttggcaataa tactcttcga aaatcaaaat
    15301 cagacgttgt tgacttgatt tgatgactga aaagctcctg tggaggtttt cagcctgttc
    15361 ccttgaaata taaaaggaac agtgttctat ctgcatcata ttgatacgaa ctaggttcgc
    15421 tctatctcca acctccaaag gttccccaaa cctttggaac aagtctgatt ttgattttca
    15481 ttgagtataa aaattaaccc ctgacgataa gcaaccgtca ggggatttct tttatctact
    15541 ctccaaataa tccgcaatag ccgccacatc tttatctcca cgaccggaga cattaatgat
    15601 aatgatttta tctttatcta gttgtggtgc taatcgaata gcttctgcaa tcgcatgaga
    15661 agattcaatg gctggaagaa ttccttctgt acggctaagt gttaaaagag cattgacagc
    15721 ttcatcatct gttgctgcga cataattaac acgcccagtt tccttatagt gggcatgttc
    15781 tgggccaaca cctggataat ccaagcctgc tgagatcgaa taaacaggtg ctactccacc
    15841 attttcatca aagagggaga ttgtcttcat cccatcaaca acaccaactg ttcccttagt
    15901 catagtcgcc gcatgcagtt ctgtatcaac tcctttacca gcagcttcta caccgataag
    15961 cttgactgat tcatctggta aatattgaga aaatgcaccg atggcattgg aaccaccacc
    16021 cacacaggca ataacgtagt ctggcaagca accttctttt tctaaaatct gacgacgaga
    16081 ttctagacta ataatctttt gaaactcatg tacaatcgtc ggatagggat gaggaccgac
    16141 tgccgatccc aaaacataga aggcatctaa atctgccatc catgcaccga atgccgcatc
    16201 aactgcctct ttcaaggttt gagttccatc cgttacagca tggacacgcg cccccatcat
    16261 ctccattcgg aaaacattaa ggcgttggcg tttgacatct tctgccccca tatagacatc
    16321 acatcccaaa ccaaatcgtg ccgcaacagc agcagtcgct accccgtgtt gacctgcccc
    16381 agtttccgca atcacacgtg ttttacccat ccgcttagct aggagtatct gacccaagac
    16441 attattgagt ttgtgggaac ccaagtgatt caaatcttcc cgtttaagat aaatttttgc
    16501 accacctagt tcttttgtca aggattccgc aaaatacaac ggtgtttcac gacctgcata
    16561 atcctttaaa tagccttggt attctgcaac aaactccgga ttattacgat aggtttcaaa
    16621 cgtttcttcc aattgatcca acaaaacctg aatttgatcc ggtacgaaac taccaccaaa
    16681 ttgtccaaaa taaccttttt ctgccatata tttccctctt tcttttaaat atattttgtg
    16741 attttttctt accattagct attattcttt actatttgct acgccatcgc ttcatactaa
    16801 ttacctcgct ttatctacaa gacaaataga aagcccccgc aggaaaaaac aac
//
LOCUS       DASFQS010000051        16668 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.052, whole genome shotgun sequence.
ACCESSION   DASFQS010000051 DASFQS010000000
VERSION     DASFQS010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16668
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.052"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(24..818)
                     /locus_tag="U1041_001357"
     CDS             complement(24..818)
                     /locus_tag="U1041_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM4768467.1"
                     /translation="MDKLILGRYIPGDSIIHRLDPRSKLLAMFGFLLMIFWANNLVTN
                     ALLIAFVLGMVVLSRIRLSFFINGLKPMIGIILFTTFFQVFFTPGATILWEFWIFKLS
                     VEGLQQAAIIFVRFVLIIFFSTLLTLTTTPLSLADGIESGLAPLKKFKVPVHEIGLML
                     SMSLRFVPTLMDDTTRIMNAQRARGVDFNEGNLIQKVKSVIPILIPLFASSFKRADAL
                     ATAMEARGYQGGDGRTKYRILEWKLADTLAILVMLALAGLLFILKK"
     gene            complement(811..1653)
                     /locus_tag="U1041_001358"
     CDS             complement(811..1653)
                     /locus_tag="U1041_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HEM4768468.1"
                     /translation="MGIDLQEVSYTYQAGTPFEGRALFGVDLEIVDGSYTALIGHTGS
                     GKSTILQLLNGLNVPTEGRVVIDDVVITATSENKDIKQVRKKVGLVFQFPESQVFDET
                     VLKDVAFGPQNFGVSQEEAETIAREKLALVGIDESLFERSPFELSGGQMRRVAIAGIL
                     AMEPSILVLDEPTAGLDPAGRQELMDIFKKLHESGMTIVLVTHLMDDVANYADFVYIM
                     EKGKLVRSGKPVDIFQEVDFLESIQLGVPKITKFAANLERRGFVFERLPITIEEFTGM
                     VIHG"
     gene            complement(1629..2465)
                     /locus_tag="U1041_001359"
     CDS             complement(1629..2465)
                     /locus_tag="U1041_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HEM4768469.1"
                     /translation="MMNIIEVKNLKYKYNQEDEQYTLNDVSFHVKQGEWLSIIGHNGS
                     GKSTTVRLIDGVLEAESGDIYIDGDALTIDNVWDKRRLIGMVFQNPDNQFVGATVEDD
                     VAFGLENQGILLEEMRSRVDEALELVGMTDFKTREPARLSGGQKQRVAIAGVVALRPK
                     IIILDEATSMLDPEGRLDLIKIVREIKERHGMTVISITHDLDEVALSDRVIVMKNGQV
                     ESISTPNELFMREDLVDLDLDRPFTTELASSLRQTGLDLPLRYFTEEELEETLWELIS
                     KK"
     gene            complement(2462..3001)
                     /gene="pgsA"
                     /locus_tag="U1041_001360"
     CDS             complement(2462..3001)
                     /gene="pgsA"
                     /locus_tag="U1041_001360"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEM4768470.1"
                     /translation="MKKENIPNALTIGRILVIPIFILLLTVWNSTISHVLAALIFALA
                     SITDYLDGYLARKWQVVTNFGKFADPMADKILVMTAFIMLVELGFAPAWVVAIIICRE
                     LAVTGLRLLLVENGGTVLAAAMPGKIKTFSQMFSVIFLLLHWNVVGQITLYIALFFTL
                     YSGYDYFKGASFLFKDTFK"
     gene            complement(3011..3868)
                     /locus_tag="U1041_001361"
     CDS             complement(3011..3868)
                     /locus_tag="U1041_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4768471.1"
                     /translation="MRQKSIGEVLRTAREGRGWTFVDLQRITKIQAKYLQALEYNDFD
                     FIANSDDVQSTLKAYAEALELDADVLLDAYETNSLVKYYEDGEEELRSSELKRSYKVR
                     KRKKNSYLPLIYLLLATGLIIIFVTYIVHSRLQNRASITPTTTSYSIVEQSVSEASSG
                     TETSSTEQAQSNSTSSSSYATENVTISGSGSNIVATLKTVIYPVEVTVTAKNTTSWIS
                     LSDTLLEGGVTLTPDNPTVTTTIEEGVTSTTLVLGVVKGVEVTVGGKKLDLSALTADT
                     GSITINFEQ"
     gene            complement(3950..5233)
                     /locus_tag="U1041_001362"
     CDS             complement(3950..5233)
                     /locus_tag="U1041_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM4768472.1"
                     /translation="MKLVEKKYPYMKESVFYGKVDNGLTVILLPKVDFHETYGILTTN
                     FGGIHTRFTLANGNSVVYPAGIAHFLEHKLFETENEEDIMNEFAKLGASANAYTSFRQ
                     TSYLFSTTQKVLESLSLLQSFVREPYFTEDNVEREQGIIEQEIEMYQDDADYRLFTGI
                     LSSLYPESPLAYDIAGTVESIATITADDLHENFEVFYHPSNMNLFVIGNFDLEAVWKQ
                     ISSYQAAQMDNPAQSFELAGVQKLPIQEHLSEQFEVSTPKLAVGLRGNDEVDKETIQK
                     YRLSLQFLFAMLFGWTSKRYQQLYEQGKIDSSFQFQLEVTPEYHYLIISGDTQEPITL
                     SSILMKALRKFEDDADVTEDHLQLLKNEMYGDFIRSLNSLEFTASHFVSQYSEYENVF
                     DIPQMIQSLQLDDIREAGCRFIDHCDMTDFTIFPK"
     gene            complement(5230..6483)
                     /locus_tag="U1041_001363"
     CDS             complement(5230..6483)
                     /locus_tag="U1041_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM4768473.1"
                     /translation="MKLQEGVDLHFIDTDQFTTNRIRIRFAAEMSEATVAGRVLVANI
                     FEMGNQEFQTAQAVRRRLAELYGAQFSTSVSKRGRVHCVDVTISYVSPRHLPENEDIT
                     VEILDFLYTCIFRPLKKGRGFDSQIFEVEKTNLINFLQSEIEDNFYHADVEMSKLFYK
                     DPSLQIPRVGRLDLVEKETAESTFQIYRNMLRMDKIDIFVLGKVDREQVKRKLEDFGF
                     TYRNPKLELEYHQEYSNITQEKIERKQARQSILELAYHLQVIYNDVNYPALMVFNGLL
                     GAFSHSKLFMNVREKESLAYTIGSQVSIFSGMLKVYAGISRENRLRVMKLISKQLLDL
                     KCGKFTEEELELTKNMLIHSATLAQDRQNNLIEQVYNQVTLGNRNLSWLDWIEAIKSV
                     SIDDVIRVGQMINLQAVYFMEGTEE"
     gene            6557..6940
                     /gene="yaaA"
                     /locus_tag="U1041_001364"
     CDS             6557..6940
                     /gene="yaaA"
                     /locus_tag="U1041_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HEM4768474.1"
                     /translation="MEFKLFDDYITLQALLKTTGILHSGGAIKGFLEENTILFNGEDE
                     KRRGKKIRVGDVITLPDHNTSITIVAPSAEEIKQHQEDQAEKERVAAIVKKLNQENKK
                     NKKQVKTPKKATKNTERKPVRFPGM"
     gene            6943..8037
                     /gene="recF"
                     /locus_tag="U1041_001365"
     CDS             6943..8037
                     /gene="recF"
                     /locus_tag="U1041_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEM4768475.1"
                     /translation="MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIY
                     VLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGKVPLDIHLTDKGRVTKVNHLKQA
                     KLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
                     NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREEL
                     TIEYKTSIELTDDVNLIDKFLTELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYG
                     SQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQIKLLETITDTIQTF
                     ITTTSLNHLHKLPDNLKIFHIESGKVTESE"
     gene            complement(8307..9788)
                     /gene="guaB"
                     /locus_tag="U1041_001366"
     CDS             complement(8307..9788)
                     /gene="guaB"
                     /locus_tag="U1041_001366"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003090086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEM4768476.1"
                     /translation="MSNWDTKFLKKGFTFDDVLLIPAESHVLPHDIDLKTQLAPNLTL
                     NLPIISAAMDTVTDSKMAIAMARAGGLGVIHKNMSIAEQADEVRKVKRSENGVIIDPF
                     FLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISDYSQPISTNMT
                     SDELVTAPVGTDLATAEAILHKHRIEKLPLVDENGRLSGLITIKDIEKVIEFPNAAKD
                     EFGRLLVAGAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIKEIREHFPTR
                     TLIAGNIATAEGARALYEAGVDVVKVGIGPGSICTTRVIAGVGVPQVTAIYDAAGVAR
                     EYGKTIIADGGIKYSGDIVKALAAGGHAVMLGSMFAGTDEAPGETEIFQGRKFKTYRG
                     MGSIAAMKQGSKDRYFQASVNEANKLVPEGIEGRVAYKGSVADMIFQMVGGLRSGMGY
                     VGAGNLTELHENAQFIEMSGAGLKESHPHDVQITNEAPNYSVQ"
     gene            complement(10017..11042)
                     /gene="trpS"
                     /locus_tag="U1041_001367"
     CDS             complement(10017..11042)
                     /gene="trpS"
                     /locus_tag="U1041_001367"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEM4768477.1"
                     /translation="MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQNAGQHELFVFLA
                     DQQALTDHAKEPQKIIESVGNVALDYLAAGLDPAKTTIFIQSQIPELAELTMYYMNLV
                     SVARLERNPTVKTEIAQKGFGEGIPAGFLVYPVSQAADITAFKANFVPVGNDQKPMIE
                     QTREIVRSFNYAYQTDILVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIYLADDMD
                     TLKKKVMSMYTDPNHIRVEDPGKIEGNMVFHYLDVFGREEDKAEIEAMKEHYQRGGLG
                     DVKTKRYLLDILERELGPIRERRLEFAQDMGQVYAMLEAGSQKARQVAATTLDQVKDA
                     MGINYFK"
     misc_binding    complement(11097..11326)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            11428..12300
                     /locus_tag="U1041_001368"
     CDS             11428..12300
                     /locus_tag="U1041_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM4768478.1"
                     /translation="MKERIKDFISVTLGSVVMAIGFNSFFLENNIVSGGVGGLAIALN
                     ALLGWSPSDFVLYCNIPLLIICWFFLGKSVFIKTVYGAIIYPLCIKLTAGLPNLTENP
                     LLAAIFGGIILGFGLGLVFLGNSSTGGTGILIQFIHKYTPLSLGLTMAIIDGIIVGLG
                     FVAFDTDTVMYSIIALMTITYIVNRMMSGTESSRNVMIISQKAGEIKDYITKVADRGV
                     TEFPIVGGFTGVDKRMLMTTISIPEMQKLETAVLEIDETAFMVVMPASQVRGRGFSLQ
                     KDHKHYDEDILIPM"
     gene            12365..13987
                     /locus_tag="U1041_001369"
     CDS             12365..13987
                     /locus_tag="U1041_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4768479.1"
                     /translation="MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFL
                     KILAGDIEPSTGHISLGPDERLSVLRQNHFDYEDERVIDVVIMGNEQLYSIMKEKDAI
                     YMKEDFSDEDGVRAAELEGEFAELGGWEAESEASQLLQNLNISEDLHYQNMSELTNGE
                     KVKVLLAKALFGKPDVLLLDEPTNGLDIQSINWLEDFLIDFENTVIVVSHDRHFLNKV
                     CTHMADLDFGKIKIFVGNYDFWKQSSELAAKLQADRNAKAEEKIKELQEFVARFSANA
                     SKSKQATSRKKMLDKIELEEIIPSSRKYPFINFKSEREIGNDLLTVENLKVVIDGETI
                     LDNISFILRPGDKTALIGQNDIQTTALIRALMGDIEYEGTVKWGVTTSQSYLPKDNTR
                     DFDTNESILDWLRQFASKEEDDNTFLRGFLGRMLFSGDEVNKPVNVLSGGEKVRVMLS
                     KLMLLKSNVLVLDDPTNHLDLESISSLNDGLKAFKESIIFASHDHEFIQTLANHIIVI
                     SKNGVIDRIDETYDEFLENAEVQAKVQELWKA"
     gene            14024..16603
                     /locus_tag="U1041_001370"
     CDS             14024..16603
                     /locus_tag="U1041_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HEM4768480.1"
                     /translation="MKKIFTKTSIYYLLSFLIPLTIISIVLAFQGIWWGSDTTILASD
                     GFHQYVIFNQTLRNALHGDGSLFYTFTSGLGLNFYALSSYYLGSFLSPLVFFFDLQSM
                     PDALYLVTVVKFGLIGLSTYFSLKGIHKNLKEEWALLLATSFSLMSFSTSQLEINNWL
                     DVFILLPLVLLGLHRLLKKQGSILYYITLTCLFIQNYYFGYMVTIFLTLWTLVQLSWI
                     DSQRIKRFINFTIVSILSALSSMFMLLPTYLDLKTHGETFTKIVNLKTEDSWYLDFFA
                     KNLVGSFDTTKFGSIPMISVGLVPLILALLFFTLKEIKPTVKLSYALFFTFIISSFYL
                     QPLNLFWQGMHAPNMFLYRYAWALSITVIYLAAETLVRLRQVSIKNFTLIVSFLLICF
                     TSTFIFRDHYEFLTDVNFLLTLEFLIAYFILFVAMIRYKSSLKWINIVLLFFTFLELG
                     LHSHYQVQGISDEWHFPSRSNYEEKLTDINSIVKSTKTTTDSFYRIERLLPQTGNDSM
                     KFNYNGISQFSSIRNRASSSVLDKLGFRSDGTNLNLRYQNNTIIADSLFGVKYNLATT
                     DPNKFGFTLNQSQSTINLYENSFNLGLALLTEGVYKDVNFTNLTLDNQTNFLNQLTGL
                     SQKYYHTLSDVVSQNTVELSNRMTVNKVDNEDAAKATFLVNIPANSQVYLNLPNLTFS
                     NENQKKVVITVNNQSSEFTLDNAFSFFNVGSFTTDVQVQVDVYFPENNQVSFDKPQFY
                     QLDLLAFQQAISILQEKQVVTKTDGNKVTVDFVTDKESSLLLTLPYDKGWNATIDGKP
                     IKIQKAQDGFMKVDVSPGQTKLVLTFVPNGFYLGLLISFGAVFVFFSYQFIGYYYSKN
                     REY"
BASE COUNT         5219 a         3559 c         2780 g         5110 t
ORIGIN      
        1 acgctatttc tagcgttttt tactcatttt ttcaatataa ataagagtcc agctaaagct
       61 aacataacta aaattgctaa cgtatctgct aacttccatt ccaaaatccg gtacttggtt
      121 ctcccatctc caccttgata cccacgcgcc tccatcgccg ttgcaagagc atctgccctc
      181 ttaaaactgg aagcaaataa aggaatcaag ataggaataa ctgattttac cttctgaata
      241 agatttccct cattaaaatc cactccacga gctctctgag cattcataat ccgagtggta
      301 tcatccatca aggtcggtac aaaacgcaag ctcatggaca acatcaaacc aatttcatgc
      361 acaggaactt taaatttctt caaaggtgca agacctgatt caataccatc tgccaagcta
      421 aggggtgttg tcgtcaaggt caacagcgtt gaaaagaaaa taatcaaaac aaagcgaaca
      481 aaaataatcg ccgcctgttg caacccttct acagataatt taaaaatcca aaattcccat
      541 agaatggtcg ctccaggtgt aaagaaaacc tggaagaaag ttgtaaatag aataattcct
      601 atcatcggtt tcaaaccatt aataaaaaat gataagcgaa tacgagataa aacaaccatt
      661 cctaaaacaa atgctatcaa caaggcattg gtgaccaaat tattagccca aaaaatcatt
      721 aagagaaatc caaacatggc taaaagctta cttcttggat ccaagcgatg aataattgaa
      781 tccccaggaa tatagcgacc taaaattaat ttatccatgt atcaccatcc ccgtaaattc
      841 ttcaattgta ataggaagac gttcaaatac aaaacctctt ctctccaaat tagctgcaaa
      901 cttagtaatc ttaggcactc ccaactgaat actctctaaa aaatctacct cttgaaaaat
      961 atcgactggt ttaccagaac ggaccagctt ccctttttcc ataatgtaaa caaaatcagc
     1021 ataattagcc acatcgtcca tcaaatgagt taccaaaacg attgtcatgc ctgattcatg
     1081 aagctttttg aaaatatcca tcaattcctg acgacccgca ggatccaatc cagccgttgg
     1141 ttcatccaaa accaagatac ttggttccat tgccagaatc ccagcaatag ctacccgacg
     1201 catttgacca ccagatagtt caaaaggact gcgctcaaac aaactctcat caattccaac
     1261 caaggccaac ttttcacgcg caattgtttc agcctcttcc tgagaaactc cgaaattttg
     1321 tggaccaaaa gcaacgtctt ttaagaccgt ttcatcaaac acttgacttt caggaaattg
     1381 gaacaccaac cccactttct tcctgacttg cttaatatcc ttattttcag acgtcgctgt
     1441 aatcacaaca tcatcaatga ctactcttcc ttctgttggt acatttaatc cattcaagag
     1501 ttgtaaaatc gttgatttac ccgaacccgt atgcccaata agggccgtgt aagagccatc
     1561 aacaatctcc aaatccacac caaaaagcgc acgcccctca aaaggagtgc cagcttgata
     1621 ggtatagctt acttcttgga gatcaattcc cataaagttt cctctaattc ttcctctgta
     1681 aaatagcgga gcggtaaatc aagtccagtc tggcgcaaag atgaagccag ttctgtcgta
     1741 aacggtctat ccaagtctaa atctaccaaa tcttctcgca taaatagttc atttggagtg
     1801 ctaattgatt caacctgtcc atttttcatc acgataactc gatcactcaa tgcaacctca
     1861 tccaaatcat gtgttataga gataaccgtc ataccatgac gctccttaat ttcacggaca
     1921 atcttaatca agtcgagacg accttctgga tccaacatag acgtagcctc atccaaaata
     1981 ataatttttg gacgtaaggc aaccactcca gcaatcgcca ccctctgctt ctgaccacca
     2041 gataaacgag caggctcacg tgttttgaaa tcagtcattc caaccaattc caaagcttcg
     2101 tcaactcgac tacgcatctc ttccaatagg ataccttggt tctctaaacc aaatgcaaca
     2161 tcatcttcaa ctgtagcacc cacaaattga ttatctggat tttgaaaaac catgccaatc
     2221 aagcgtcgct tatcccatac attatcaatg gttaaggcat caccgtcaat ataaatatca
     2281 ccggattcag cttccagtac tccatcaatc aatcgaacag ttgtcgattt cccagaacca
     2341 ttatgaccaa taatagacag ccactctccc tgtttcacgt gaaacgaaac atcatttaga
     2401 gtatattgct catcctcttg gttgtattta tattttaaat tttttacttc aataatattc
     2461 atcatttaaa tgtatcttta aacaagaagg acgcaccctt gaaataatca taacctgaat
     2521 atagggtgaa gaaaagtgca atatagagtg ttatttgccc cacgacgttc cagtgtaaga
     2581 gcaggaaaat cactgaaaac atctgtgaaa atgttttgat ttttcccggc atagccgcag
     2641 ctagaactgt tcctccattt tccaccaaga gtagacgaag accagtcact gccaattcac
     2701 gacagattat aatcgccact acccaagctg gagcaaagcc aagctctaca agcatgataa
     2761 atgctgtcat caccaaaatc ttatctgcca tcggatccgc aaattttcca aagtttgtta
     2821 caacctgcca tttacgagcc aagtagccgt ctagataatc cgtaatactt gccaaagcaa
     2881 agattagtgc tgctaagaca tgactaattg ttgaattcca aacggtcagt aacaagataa
     2941 aaattggaat taccaaaatc ctacctatcg tcaatgcatt gggaatattt tcttttttca
     3001 tataaaacct ttattgttca aaatttattg taattgagcc tgtatctgct gtcaaggctg
     3061 atagatctag ctttttgcca cctacagtta cctctactcc tttgacaaca ccaagaacaa
     3121 gtgtagtaga agtcactcct tcttcaatag tagtagttac tgttggatta tcaggtgtta
     3181 gtgtaacgcc cccctctaac aaggtgtcag aaaggctgat ccaactcgtt gtattttttg
     3241 ctgttacagt tacttctact ggataaatca ctgttttaag ggtcgcaaca atgttagaac
     3301 ctgatcctga aatagtcaca ttttctgtag cgtaactact tgaactcgtt gaatttgact
     3361 gcgcctgctc agtagaactc gtctctgtgc cactacttgc ttcagataca gattgctcaa
     3421 ctatactata tgatgttgta gtaggcgtaa tagatgctct attttgaagc ctgctatgaa
     3481 caatataagt cacaaaaata ataatcaaac ccgtcgcgag taataagtaa atcaacggaa
     3541 gataagagtt ctttttacgt ttacgaacct tatagcttct tttcaattct gaagagcgta
     3601 gttcttcttc tccatcttca taatatttca ctaaactatt ggtctcgtaa gcatccagta
     3661 gaacatctgc atctaattcc aaagcctcag catatgcttt taaagtagac tgaacatcat
     3721 ctgagtttgc aataaaatca aaatcattgt actcaagtgc ctgcaaatat ttagcttgga
     3781 tttttgttat ccgttgcaag tcaacaaatg tccaaccccg tccttctctg gctgttctaa
     3841 gtacttcccc tatactcttt tgtctcataa tactctctct ctatcgctca tcatgtacag
     3901 tatactattc taacaaaatt ccaaggaaat ttcgacgggt tgcgcccact tattttggaa
     3961 aaatcgtgaa atctgtcata tcacagtgat caataaagcg acaacctgcc tctctgatgt
     4021 catctaactg aagactttgt atcatttgag gtatatcaaa aacattttca tattctgaat
     4081 actgagaaac aaagtgacta gctgtaaact caagagaatt taagctacga ataaaatctc
     4141 catacatctc gtttttcaac aattgtaaat gatcctctgt cacatctgca tcatcctcaa
     4201 atttcctaag tgctttcatc aggatactag aaagcgtaat gggttcttga gtatctcccg
     4261 aaataatcaa atagtggtat tcaggtgtaa cctctaattg gaactggaaa gaagaatcaa
     4321 tttttccctg ctcgtataac tgttgatagc gttttgaagt ccaaccaaac aacatggcaa
     4381 ataaaaattg taaactaagc cgatatttct gaatagtctc cttatcaacc tcgtcatttc
     4441 cccgtaaacc aacagccaat tttggggtag atacttcaaa ttgttctgag agatgttcct
     4501 gtatcggcaa cttttggaca cctgccaatt caaacgactg agctggatta tccatctgag
     4561 ctgcttgata acttgaaatt tgtttccaaa ctgcctctaa atcaaaatta ccaataacga
     4621 ataaattcat gttacttgga tgatagaaca cttcaaaatt ctcatgtaaa tcatccgcag
     4681 taattgtagc aattgattca actgtccctg ctatatcata ggccaaagga ctttctggat
     4741 aaagcgatga tagaattccc gtaaacaagc gataatctgc atcatcttga tacatctcga
     4801 tttcttgttc aataatcccc tgttctcttt ctacattgtc ttctgtaaaa tacggttctc
     4861 gaacaaaaga ttgtaaaagt gatagagact ccaatacttt ctgagtcgtt gaaaataagt
     4921 aactagtctg tctaaaactg gtataagcat ttgcgcttgc tcccaattta gcaaactcat
     4981 tcataatatc ctcttcattc tcagtttcaa acagcttatg ttctaaaaaa tgtgcaatcc
     5041 ctgcaggata aacaacacta ttaccattag ccaatgtaaa tcgagtatga atacccccaa
     5101 aatttgtcgt tagaattcca tatgtctcat ggaaatctac tttaggaagc aaaataactg
     5161 tcaacccatt gtcaactttc ccataaaaga cagattcttt catgtaagga tacttcttct
     5221 caactaactt cattcttctg tcccctccat aaagtaaaca gcctgtaaat taatcatctg
     5281 tcctactcga atgacatcgt ctattgatac cgatttgata gcctcaatcc aatctaacca
     5341 acttaaattt ctatttccta aggtaacttg attatatact tgttctatca aattattctg
     5401 cctatcttga gccaaggttg ctgaatgaat caacatgttt tttgtcaact ctaattcttc
     5461 ttctgtaaac ttaccacatt ttaaatcaag tagttgttta ctaattaact tcattaccct
     5521 gagtctattt tcacggctaa ttccagcata aaccttcagc attcctgaaa aaatagagac
     5581 ctgactgcca attgtatagg ccaaactttc tttctcacga acattcataa ataacttcga
     5641 atgggaaaaa gcacccagta gaccattaaa taccatcaaa gccggatagt ttacatcgtt
     5701 gtaaatcact tgtaaatgat atgccaattc caaaatggac tgccttgcct gtttacgctc
     5761 gattttttct tgcgtgatat ttgaatattc ctgatgatat tctaactcta atttgggatt
     5821 tctataagta aaaccaaaat cttcaagttt tcttttgact tgttctctgt caaccttccc
     5881 taagacaaat atatcaattt tatccatacg caacatattc cgataaatct gaaaggttga
     5941 ttctgctgtt tctttttcaa ccaaatcaag cctaccgacg cgtggaattt gaagagaggg
     6001 atctttataa aaaagcttac tcatttcaac atctgcatga taaaaattat cttctatctc
     6061 tgactgaaga aaattgatta aattcgtttt ttcaacctca aaaatctggc tatcaaatcc
     6121 tcgccccttt ttcagtggtc taaatataca tgtgtataaa aaatcaagaa tctccactgt
     6181 aatatcctca ttttctggca agtgacgagg actgacatat gaaattgtca catctacaca
     6241 gtgcacccta ccacgtttcg aaactgaggt cgagaactga gcaccataca attctgccaa
     6301 tcttctccga acagcctgag cagtctgaaa ttcttggtta cccatttcaa aaatatttgc
     6361 aactaacaca cgaccagcga ctgtagcctc actcatttca gctgcaaagc gaatacgtat
     6421 acgatttgtc gtaaactgat ctgtatcaat aaaatgaaga tctactccct cttgtaattt
     6481 catcgtcttc ctctttcaaa cattgtgcct tccattatac cattttgtga tataatattc
     6541 tgtaacgagg tgacttatgg aatttaaatt atttgatgac tacatcacat tacaagcatt
     6601 gttaaaaacg actggtattc tccattcagg aggtgccatt aaaggtttct tagaagaaaa
     6661 taccattctt ttcaatggag aggatgaaaa aagacgcggt aaaaaaatcc gtgtcggaga
     6721 tgttatcaca ctcccagacc acaacaccag catcacaatc gtcgctccta gtgcagagga
     6781 aatcaaacag caccaagagg atcaagctga aaaagaacgt gtggctgcaa tcgttaaaaa
     6841 gttaaatcaa gaaaataaaa agaataagaa acaggtaaaa actcctaaaa aagcaactaa
     6901 aaatactgaa agaaaacctg ttcgtttccc tggtatgtag acatgtggct agaacgatta
     6961 gagttacaac attttcgcaa ttacaaccaa ttagatattg agttccacaa agggctcaat
     7021 gtctttttag gcgaaaacgc ccaaggaaaa accaatattc tagaatctat ctatgtttta
     7081 gccttaacac gaagtcatcg aacacggaca gataaggacc tactacagtt tcaagaaaag
     7141 gaattatcta tttctggttt actccatcgc acaagcggta aagttcccct tgacattcac
     7201 ttgacagaca aggggcgagt gaccaaggtc aaccatctca aacaagccaa gctttccaac
     7261 tatatcggcc acatgaatgt tgttctcttc gcccctgaag atttacagct gattaaaggt
     7321 gcccctgctt tgagaagaaa gttcatcgat gtcgagctcg ggcaaatcaa gccactctat
     7381 ctctctgacc tatcgaatta taatcacgtt ttaaaacaaa gaaatactta cctcaaatct
     7441 acagataaga ttgatgagaa cttcctatcc gtgttagatc agcaacttgc tgaatatggt
     7501 agtcgtgtta tccaacatcg tattgacttt ctaaagaaat tagaggaatt cggaaataga
     7561 aaagttcaag aaatatctgg caatcgggaa gaattgacaa tcgaatacaa aacctcaatc
     7621 gaattgacag acgatgtcaa tttaattgac aaattcttga cggaattgga aaggtgtcgt
     7681 aaacgtgatt tatttaagaa aaatacagga gttggaccac atcgagatga tgtagctttc
     7741 tttataaatg gaatgaatgc ccattatggt agccaaggtc agcaccgcag tctcgttctg
     7801 tcactcaaac tggctgaaat tgagctgatg aaggaggtca cacgagaata cccaattcta
     7861 ctcttagatg atgttatgag tgagctggat aataatcgtc aaatcaaact actagaaact
     7921 attacagata cgattcaaac atttattaca acgacatctt taaaccattt acataagcta
     7981 cctgataatt taaaaatctt ccatattgag tctggtaagg ttactgagtc agaataagat
     8041 tgtttacact gttgtcaata aaatttacaa aaaagtaaag accctgtcaa gagggtcttg
     8101 cagaacgtag acaaactcct aaaaatataa aaaattgaag aagtttgcgg aagatagcaa
     8161 gttattaaac tcttagaaat attgatattt cggcgtttct gagagttttt ttattttcaa
     8221 cataaagaaa aagattgaag aaaattatcc aaaatggact ttttcttcaa tctgcaagac
     8281 cctgtcaaga gggtcttgtt tttgttttac tgaactgaat agtttggagc ttcgtttgtg
     8341 atttgaacat cgtgtggatg gctttctttc aaaccagcac ctgacatttc gatgaattga
     8401 gcattttcat gcaattcagt caagttacca gcacctacat agcccattcc tgagcgaagt
     8461 ccaccaacca tttggaaaat catatctgca acagaacctt tataggctac gcgaccttca
     8521 attccttctg gaaccaactt gttagcttca tttacagatg cttggaagta gcggtctttt
     8581 gaaccttgtt tcatggcagc gatagagccc attccacgat aggtcttgaa cttacgacct
     8641 tggaagattt cagtttcacc tggtgcttca tcagttccag cgaacataga gccaagcata
     8701 acagcatgac cacccgcagc aagtgccttg acaatatctc ccgaatactt gataccaccg
     8761 tcagcgataa tggttttacc atattcacgc gcaacaccag ccgcatcgta gatagctgtc
     8821 acttgtggta ctccaacacc tgcgatgaca cgtgttgtac agattgaacc tggtccaata
     8881 ccgaccttca caacatcaac accagcttca taaagagcac gagctccttc agctgtggca
     8941 atgttgccgg caatcaaggt acgagttggg aagtgttcac gaatttcttt aatcttgcga
     9001 agaacacctg ctgagtgacc gtgagctgta tcgatgacaa tcgcgtctgc acccgcttca
     9061 aaaagggctt ctgcacgttc aaaagtatca gatgtaacac caacagcacc cgcaaccaag
     9121 agacgaccaa attcatcctt cgcagcattt gggaactcaa tcactttctc aatatctttg
     9181 atggtaatca agcctgacaa acgaccattt tcatcaacca atggcaattt ttcaatacga
     9241 tgcttgtgaa gaatagcctc cgcagtcgca agatctgttc caactggcgc tgtcaccaat
     9301 tcatcgcttg tcatgttggt cgaaattggc tgtgaatagt cagaaatgaa acgcatatca
     9361 cggttggtga tgataccaac taatttacga ttttccaatg tttcaacgat tggcacaccg
     9421 gaaatacgat aagtagccat caatttctca gcttcagcaa tggtgtgttc tggtgttaag
     9481 aagaatggat cgataatgac tccattttca gaacgtttta ccttacgcac ctcatctgcc
     9541 tgctctgcga tagacatgtt cttatgaatg acgcccaaac cacctgcacg cgccatagcg
     9601 atagccattt tgctatctgt tactgtatcc atagcagcag aaataatcgg aagattaagg
     9661 gtcaaatttg gtgctaattg tgtttttaaa tcaatatcat gtggtaatac atgactttca
     9721 gccggaataa gtaatacatc gtcgaaagta aagccttttt tcaaaaattt agtgtcccag
     9781 tttgacattt tcttcctctt ttcttttttg ttactagcta tcgctataat tattttattt
     9841 atgataacat tttgaaatca tttgtcaaat attattcgct ttaaaataag taataataaa
     9901 aattcagaaa attctttacc actttctttt agaaagccga atgtttgttt tttactttat
     9961 tataaaacaa atgaaaaaag caacattttc tcaacattgc tcttttattg ttaaccttat
    10021 ttaaagtagt tgattcccat ggcatccttt acttggtcaa gagttgtcgc agcaacttgg
    10081 cgagcttttt ggctacctgc ttccaacatt gcatagacct gtcccatatc ctgtgcaaac
    10141 tccagacggc gttcacggat tgggcctaat tctctctcta aaatgtccag caaataacgt
    10201 ttggtcttca catcacccaa accaccacgt tgatagtgct ccttcatagc ctcaatctca
    10261 gccttatctt cttcgcgacc aaaaacgtca agatagtgga aaaccatgtt tccttcaatc
    10321 ttacctgggt cttcaacacg gatgtggttg ggatcagtgt acatggacat gacttttttc
    10381 ttgagcgtat ccatgtcatc tgccagataa ataccatttc caagggactt ggacatttta
    10441 gcgttgccgt ctagacctgg taggcgacca gctgcttcat tttcaggata aatcccttcc
    10501 ggttctacca aaatatcggt ttggtaagca tagttgaaac tccgaacaat ttcacgagtc
    10561 tgctcaatca taggtttctg gtcatttcct actggaacaa agtttgcctt gaaggctgta
    10621 atatccgccg cttgtgacac aggataaacc aagaaaccag ctggaattcc ttcgccaaat
    10681 cccttctgag caatctcggt ttttacagtc ggattacgtt ccaaacgagc caccgatacc
    10741 aagttcatgt agtacatggt caactctgcc aattcaggaa tttgactctg gatgaaaata
    10801 gttgtcttag ctggatcaag acctgctgct agatagtcca gtgccacatt accaactgac
    10861 tcgataatct tttgtggctc tttagcatga tctgtcagag cttgctggtc agctaaaaat
    10921 acaaaaagct cgtgctgtcc agcattttgc agaaggacgc gatttttcaa agagccaaca
    10981 tagtggccta tatggagttt gcctgttgga cgatctcccg ttaaaataat tggtttagtc
    11041 atcttctcac ctcatcttat gattttgata taaaaaagcc cacgcacaga aaactgtgcg
    11101 agggcgtcaa ggacacggtg ccacctcact tataagcatt aaataagctt acatctaagc
    11161 attaaataag cttacatctt tttgcacata aggcctgcta gccgaatcct tatttattca
    11221 gattctattc actcagtcca ttcataagcg actcttgttt gtttacacca accacaaact
    11281 ctctaaaaat tatccactta ctactcttct gattgattcc tattataacc gcaaaaaatt
    11341 agaaagtcaa gctgacaaag ccttgacgat actgtctaaa ttagggataa tagaaattgc
    11401 ttttataaca ctaaccaagg agaatatatg aaagaacgta taaaggactt tatctctgtc
    11461 acactcggat cagttgtcat ggccattgga tttaacagtt tttttctaga gaataatatc
    11521 gtatctggtg gtgtcggagg tttagcaatc gcactcaatg ctcttctggg gtggagtccg
    11581 tctgactttg tcctctactg taacatccct ttattaatca tctgttggtt tttcttagga
    11641 aaatctgtat ttatcaaaac tgtctatggt gctatcatct atcctctttg catcaagttg
    11701 acagcaggtt tacccaactt gacagaaaat cctctcctag ctgctatttt cggtggaatt
    11761 atcctaggtt ttggacttgg gcttgtcttc cttggaaatt cttctactgg tggaacaggt
    11821 attcttattc aatttattca caagtacacc cctttatcat taggtctgac aatggctatt
    11881 attgatggta ttatcgttgg tcttggattt gttgccttcg atactgatac tgttatgtat
    11941 tcaatcattg ccttaatgac cattacttac attgtcaatc gcatgatgtc tggtacagaa
    12001 tcctcacgga atgtcatgat catttcccaa aaagctggag aaatcaagga ctacattacc
    12061 aaggttgccg atcgtggtgt gacagaattc ccaattgtcg gtgggtttac aggagttgac
    12121 aagcgcatgt tgatgaccac catctctatt ccagaaatgc agaaactgga gacagcggta
    12181 ttagaaattg atgaaactgc ctttatggtt gttatgcctg cgagtcaggt gcgtggacgt
    12241 ggcttcagtc ttcaaaaaga ccataaacat tatgatgaag atattttgat tccaatgtaa
    12301 ttcattgaaa attcaagttc tttctagtac aataaaacta atagacagaa atagaggaga
    12361 aactatgctt acagtatcag acgtgtcgct tcgctttagc gaccgcaaat tatttgacga
    12421 tgtcaatatc aaatttacag caggaaatac ctacggtttg attggtgcaa acggggccgg
    12481 taaatctaca tttttgaaaa ttcttgctgg tgacatcgag ccatcaacag gtcatatttc
    12541 acttggacca gacgaacgcc tttctgtgct acgtcagaac catttcgact atgaagatga
    12601 gcgcgtgatt gacgttgtta tcatgggaaa tgagcaactt tacagcatca tgaaagaaaa
    12661 agatgctatt tacatgaagg aagatttttc tgatgaagat ggtgttcgtg ctgctgaatt
    12721 agaaggtgag tttgctgaac ttggtggctg ggaagctgaa agtgaagctt ctcaattgct
    12781 ccaaaacctc aacatttcag aagacctcca ctaccaaaac atgagcgaat tgaccaacgg
    12841 tgagaaggtt aaggtcctct tggctaaggc actttttggt aaaccagatg ttcttctttt
    12901 ggacgagcca accaacggtc tggacatcca atccatcaac tggctcgaag atttcttgat
    12961 tgactttgaa aatacggtca tcgtcgtgtc acacgaccgc cacttcttaa acaaagtatg
    13021 tacccatatg gccgaccttg acttcggtaa aatcaagatt ttcgttggta actatgactt
    13081 ctggaaacaa tccagtgaac tagcagctaa actacaagct gaccgtaatg ccaaagcaga
    13141 agaaaaaatc aaggaattac aagaattcgt tgcccgtttc tctgctaatg cttctaagtc
    13201 taagcaagct acttcacgta agaaaatgtt ggacaaaatc gagttggagg aaattattcc
    13261 ttctagccgt aagtacccat ttatcaactt caaatcagaa cgtgaaatcg gtaatgacct
    13321 cttaacagtt gaaaacttga aagttgtcat cgatggtgaa acgattcttg acaatatcag
    13381 ctttatcctg cgtccaggtg acaagactgc tcttattggt caaaacgaca tccaaacaac
    13441 tgctctcatt cgtgctctta tgggcgatat tgaatatgaa ggtactgtta agtggggtgt
    13501 cactactagt caatcctact taccaaaaga caatactcgt gattttgata caaacgaatc
    13561 tatccttgat tggctccgtc aatttgccag caaggaagaa gatgacaata ccttcttgcg
    13621 cggtttcttg ggacgtatgc tcttctcggg tgatgaggtt aacaaacctg taaacgtctt
    13681 gtcagggggc gaaaaagtgc gcgtgatgtt gtcaaaactc atgctcctca agtcaaatgt
    13741 cttggtctta gatgatccaa ccaaccactt ggacttggag tcaatttcca gtctgaacga
    13801 tggtttaaaa gcttttaaag agtccatcat ctttgccagc cacgaccacg aatttattca
    13861 aactttagca aaccacatta ttgttatctc taaaaatggt gtgattgacc gcattgacga
    13921 aacctacgat gaattcttgg aaaatgctga agtacaagcg aaagtacaag aactttggaa
    13981 agcataataa aaaggcgatt tattcgcctt ttcttttaaa tctatgaaaa aaatatttac
    14041 aaaaacatcc atttattatc tcttatcttt ccttattccg ctgactatta tttctatcgt
    14101 cttagcattt caaggaatct ggtggggaag tgacacaact atattagcaa gtgatggatt
    14161 tcatcagtat gtcatcttta atcaaacttt acgaaatgct ttacacggag acggctctct
    14221 tttttacacc tttacaagtg gtctaggtct aaacttctac gctctttctt cctactatct
    14281 agggtccttc ctatctccac ttgtattctt ctttgattta caatccatgc cagatgccct
    14341 ctatcttgtc actgttgtca agtttggatt gataggtttg tcaacttatt tcagtctaaa
    14401 gggtatccat aaaaatttga aagaagaatg ggcactatta ctcgctacta gtttttctct
    14461 gatgagtttt agtacaagtc aattagaaat aaacaactgg ctagacgttt ttatactcct
    14521 cccactcgtt cttcttggat tgcatcgatt attaaaaaaa cagggttcga ttctctacta
    14581 cataacatta acatgcttgt ttatccaaaa ctattacttc ggttatatgg tgactatttt
    14641 tctaacatta tggacattgg ttcaattatc atggatagat agtcagagaa tcaaaagatt
    14701 tatcaacttt acaatagtgt caattttatc tgctctaagc agcatgttca tgttgttacc
    14761 aacctacttg gatttaaaaa ctcatggtga gacatttaca aaaattgtca acctaaaaac
    14821 cgaggactct tggtatctgg acttctttgc aaaaaactta gttggtagct ttgatacaac
    14881 aaaattcggt tctattccca tgatctctgt tggtctcgtt ccattaatac tcgctttact
    14941 attctttaca ttaaaagaaa taaaaccaac tgtcaaactc tcctatgctc tattctttac
    15001 attcattatt tcaagtttct acctacaacc actcaatctt ttttggcaag gtatgcatgc
    15061 gccaaacatg ttcctctatc gttatgcatg ggctctatca ataaccgtta tctacttagc
    15121 agcagagaca ttggtacgac tacgtcaagt aagtattaaa aattttactc tgattgtttc
    15181 atttttactc atttgtttta cttctacctt tatttttaga gatcattatg agtttctaac
    15241 ggatgtaaat ttcctactca cactagaatt tctaatagcc tacttcattc tttttgtagc
    15301 aatgattcgc tataaatcat ccttaaaatg gattaatatt gttttattgt tcttcacttt
    15361 cttagaactt ggattacata gccattatca ggttcagggg atttctgatg aatggcattt
    15421 tcctagccga tcaaactatg aagaaaaatt gacagatatt aacagtattg taaagtctac
    15481 aaaaactaca actgattcat tttatcgtat agaacgtcta ttaccacaaa ctggcaatga
    15541 tagcatgaaa ttcaattaca acggtatttc tcaattctcc tccattcgaa atcgtgcttc
    15601 cagctcagta ctagataagc tcggtttccg ttcagacggt accaatttga atcttcgtta
    15661 tcagaataat acaattattg ctgatagcct attcggagtc aaatataatt tagctactac
    15721 ggacccaaat aagtttggtt tcacactgaa tcagagtcag tctactatta atctttacga
    15781 aaatagtttt aatctagggt tagccctatt gactgaaggg gtttacaaag atgtcaattt
    15841 tacaaatctg actctcgata atcaaacaaa ttttcttaat caactaacag ggctatctca
    15901 aaaatactac cacactttat cagatgttgt ttcacaaaat acagttgagt tgagcaatcg
    15961 aatgactgtc aacaaagttg acaatgagga tgctgcaaag gcaactttct tagtaaatat
    16021 acctgcaaat agccaagtat acctaaattt gccaaattta acattctcaa atgagaatca
    16081 aaaaaaggtt gtcattactg tcaacaatca gtcaagtgag tttacattag ataatgcttt
    16141 ctctttcttc aatgtgggga gctttactac agatgtacaa gttcaagtcg atgtatattt
    16201 tcctgaaaat aatcaagttt cttttgataa accacaattt tatcaattgg acttattagc
    16261 tttccaacag gctatttcca ttctccaaga aaaacaagta gtaacaaaaa ctgatggtaa
    16321 taaagtaact gttgattttg taaccgataa agaatcctca ctcctcctta ctttacccta
    16381 tgataaagga tggaatgcaa ccattgatgg taaacctatc aaaatccaaa aagcgcaaga
    16441 tggttttatg aaagtggatg taagtccagg tcaaactaaa ctagttttaa cctttgtacc
    16501 aaatggtttc tatctaggtt tactgatttc ttttggtgca gtttttgtat ttttctccta
    16561 tcaattcatt ggatactatt attctaagaa ccgagaatac taaactttct cggttttttc
    16621 ttgtaaaaag caaaaaaact tgatttctca agttttccta tgctttat
//
LOCUS       DASFQS010000052        16640 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.053, whole genome shotgun sequence.
ACCESSION   DASFQS010000052 DASFQS010000000
VERSION     DASFQS010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16640
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.053"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(587..1759)
                     /locus_tag="U1041_001371"
     CDS             complement(587..1759)
                     /locus_tag="U1041_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HEM4768481.1"
                     /translation="MIPFALKYIMVIITTMVISAIATPLVRFMSLKVGAVDKPNARRI
                     NKVPMPSAGGLAIFVAFTISVLCFLPGIVTRVNYHGTYLHYIWPLVLASSIIVLTGFI
                     DDVKELKPAPKMFGILAAATIIWIFTEFRFDSFKIPFGGPFLQFPVWLSFLLTVLWIV
                     SITNAVNLIDGLDGLVSGVSIISLTTMGIVSYFFLNDSNIFLTLTIFVLVAAIVGFLP
                     YNYNPAIIYLGDTGALFIGFMIGVLSLQGLKNSTAVAVVTPMIILGVPITDTVVAIIR
                     RKLSGQKIYEADKMHLHHRLLSLGLTHRGTVLVIYAISFLFSLTSLLLNVSSRIGGIL
                     LLVTMGLGIEILCELIGIFGINRTPLLNLLRFIGNSSYRQEKIAKYKKCYEEKKRK"
     gene            complement(1756..2478)
                     /gene="mecA"
                     /locus_tag="U1041_001372"
     CDS             complement(1756..2478)
                     /gene="mecA"
                     /locus_tag="U1041_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HEM4768482.1"
                     /translation="MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTV
                     LDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDLDQSLNFDEFTDLSELGDVASMT
                     PDEFFKSLEQTVREKSAPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFT
                     FVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPAL
                     QEHGTLMLPLAAIEELRKVPTV"
     gene            complement(2606..3445)
                     /locus_tag="U1041_001373"
     CDS             complement(2606..3445)
                     /locus_tag="U1041_001373"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEM4768483.1"
                     /translation="MMILELLKAIFLGIIEGVTEWLPVSSTGHLILVQEFVKLNQSKN
                     FLEMFNIVIQLGAILAVMTIYFKKLNPFQPGKTKRDIQLTWQLWAKVVIACIPSILIA
                     VPLDNWFEAHFNFMVPIAIALIVYGIAFIWIENRNSGVEPQVTDLAKMSYKTALLIGC
                     FQVLSIVPGTSRSGATILGAIILGTSRSVAADFTFFLGIPTMFGYSGLKAVKYFLDGN
                     SLNMEQVWILLVASVTAYLVSLVVIRFLTDFVKKHDFTVFGYYRIILGAILLVYAFIT
                     FLF"
     gene            3569..5134
                     /locus_tag="U1041_001374"
     CDS             3569..5134
                     /locus_tag="U1041_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HEM4768484.1"
                     /translation="MKHKLSIFLLSLLAVFSIATGVRADEYLRVGMEAAYAPFNWTQE
                     DDSNGAVPIEGTNQFANGYDVQVAKKIAASMDKELLVVKTKWEGLVPALTSGKIDMII
                     AGMSPTEERKKEIAFSDSYYTSIPTLVVRSDSQYANATSLADFAGAKITAQQGVYLYD
                     LIDQIEGANKQTAMGDFSQIRQALESGIIDAYVSERPEGRTAEAANKAFKMVELADSF
                     ETNAEDVTIAVGMRKDDERIAQVNEVLATISEEEQIALMDDMIENQPVEEASEGETPS
                     FFAQVWNIVVNNWQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIG
                     QKVLGWIINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMS
                     EIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSV
                     LNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEKHFDTDTYT
                     TGANQMQVEVPHD"
     gene            5130..5870
                     /locus_tag="U1041_001375"
     CDS             5130..5870
                     /locus_tag="U1041_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002962898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4768485.1"
                     /translation="MKNVILEIKNLKKSYGQNQVLKDISISVEKGEVISIIGSSGSGK
                     STFLRSINLLETPTEGQILYHGQDVLAKGYDLTTYREKLGMVFQSFNLFNNLNVLENA
                     IVAQTTVLKRDRAEAEKIAKENLNKVGMTEQYWQAKPSQLSGGQKQRVAIARALSVDP
                     EVILFDEPTSALDPEMVGEVLKTMQDLAKSGLTMLIVTHEMEFARDVSDRVIFMDKGV
                     IAEEGNPQQIFENPQEERTREFLQRFLG"
     gene            complement(5999..6208)
                     /locus_tag="U1041_001376"
     CDS             complement(5999..6208)
                     /locus_tag="U1041_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768486.1"
                     /translation="MTSYEKVAAVVGWVREKKITGYRISKETNAREMSVIALAQGRAK
                     IDNISFATALGLIDFYDKNHKKFEN"
     gene            complement(6294..7196)
                     /locus_tag="U1041_001377"
     CDS             complement(6294..7196)
                     /locus_tag="U1041_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEM4768487.1"
                     /translation="MVLGPIVFIGSFLFFVLIALILIASGLYVVKQQTVAIIERFGKY
                     QKTSTSGINFKIPFGVDVIAARIQLRMLQSEIVVETKTQDNVFVTMNVATQYRVNENN
                     VTDAYYKLMHPEAQIKSYIEDALRSSVPKLTLDELFEKKDEIALEVQKQVAEEMSTYG
                     YVIVKTLITKVEPDAEVKQSMNEINAAQRKRVAAQELAEADKIKIVTAAEAEAEKDRL
                     HGVGIAQQRKAIVDGLADSIRELKESNVSLSEEQIMSILLTNQYLDTLNNFAQGGNQT
                     IFLPGNPEGVEDIRTQILSSLRAK"
     gene            complement(7206..8456)
                     /gene="ilvA"
                     /locus_tag="U1041_001378"
     CDS             complement(7206..8456)
                     /gene="ilvA"
                     /locus_tag="U1041_001378"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019322143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HEM4768488.1"
                     /translation="MITAKNVEQAYSVLKRVVVRTPLDYSRYLSEKYGATIYLKRENE
                     QRVRSFKIRGAYYAISQLTDDEKSRGVVCASAGNHAQGVAYTCQEMQIPATIFMPITT
                     PQQKIGQVKFFGGDYVEIRLVGDTFDESAKAAQDYTQESGKTFIDPFDDENVQAGQGT
                     VAYEILEEAEEQTISFDQILVPIGGGGLVAGVSAYLKEHAPEIKIVGVEASGARSMKA
                     AFDKGRPVKLDQIDKFADGIAVQKVGKSTYEVARKYVDRLIGVDEGWISGTILDLYSK
                     LGIVAEPAGAATIAALEVVKDQIKGQTICCIISGGNNDINRMPEMEERALIYEGIKHY
                     FVVNFPQRPGALREFVNEILGPNDDITRFEYIKRANKGTGPVLIGIALGDKKDYAQFI
                     SRLEEFDPQYINLHENDSLYKMLV"
     gene            complement(8752..9774)
                     /gene="ilvC"
                     /locus_tag="U1041_001379"
     CDS             complement(8752..9774)
                     /gene="ilvC"
                     /locus_tag="U1041_001379"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006145054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEM4768489.1"
                     /translation="MTVTMQYEKDVTVAALDGKRIAVIGYGSQGHAHAQNLRDTGHDV
                     IIGVRAGKSFDKAKEDGFETFEVAEAAKQADVIMILAPDEIQADLYNEEIAPNLEAGN
                     ALGFAHGFNVHFEFIKVPADVDVFMCAPKGPGHLVRRTFEEGFGVPALYAVYQDATGN
                     AKHIAMDWAKGVGSARVGLLETTFKEETEEDLFGEQAVLCGGLTALMQAGFEVLTEAG
                     YAPELAYFEVLHEMKLIVDLVYEGGFKKMRQSISNTAEFGDYVSGPRVITDQVKENMK
                     AVLADIQSGKFANDFVNDYKAGRPRMEAYRKEAENLEIEKVGAELRKAMPFVGRNDDD
                     AFKIYN"
     gene            complement(9915..10391)
                     /gene="ilvN"
                     /locus_tag="U1041_001380"
     CDS             complement(9915..10391)
                     /gene="ilvN"
                     /locus_tag="U1041_001380"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002927678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEM4768490.1"
                     /translation="MRRMLTAKLRNSSGVLNRFTGVLSRRQINIESISVGPTEVDGIS
                     RVTVIVDVASHDEVEQIIKQLNRLIDVVRVRDLTDIPHLEREVILVKISAPPTKRTEI
                     LAIIQPFRANVVDVAPHSITIQMTGDGDKIDALLRVIQPYGIKNIARTGATGFSRD"
     gene            complement(10384..12087)
                     /locus_tag="U1041_001381"
     CDS             complement(10384..12087)
                     /locus_tag="U1041_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEM4768491.1"
                     /translation="MQEIQLDQPRSGSYLILDTLHQLGVDLVFGYPGGAVLPLYDAIY
                     QYEGIQHILARHEQGAVHEAEGYAKSSGKVGVAIVTSGPGATNAITGIADAMGDSVPL
                     LVFTGQVATRGIGKDAFQEADVLGMTMPITKYNYQIRDTADIPRVITEALHIATTGRP
                     GPVVIDVPKDIQERVVDFYHDPTVQLPSYQPTIEPNGLQVKKILKQLSQAQKPVILAG
                     GGVNYADANKELVAFAERYRIPVVSTLLGLGAMPIEHELSLAMGGMHGSYAANMAMDQ
                     ADYIINIGARFDDRLTGNPTTYAPNATVAHIDIDPAEIGKVVKTAIPVVGDAKATLKA
                     LLALETVETGYADWTAQVLENKRRAPFWYDEDEKVIKPQAAIELIGQLTQGDAIVVTD
                     VGQHQMWAAQFYPYKHARQLVTSGGMGTMGFGIPAAIGAKLANPDKEVIIFVGDGGFQ
                     MTNQELAILNGYGVPIKVVLINNHSLGMVRQWQESFYEKRRSQSVFDDEPNFQLLAEA
                     YGISHYSFDNPATLSEDMKVILEDKPMLIEVHISNREHVQPMVPAGKSNAEMLGVKFN
                     A"
     gene            12313..13365
                     /locus_tag="U1041_001382"
     CDS             12313..13365
                     /locus_tag="U1041_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyltransferase family 2/GtrA
                     family protein"
                     /protein_id="HEM4768492.1"
                     /translation="MYYVVIPAYQPDEKLIQLLEIMKNRLNCQVIVVDDGSTGASKNI
                     LEIAKTYAIVLHHDVNKGKGQALRTAFSFIQDLRKPGVVVTADADGQHAVNDIDRVAR
                     AAMNLPSRLILGVRQFTNDIPLRSRFGNKLTRVLFRLQTGVNVSDTQTGLRGFHTDLI
                     PFMLDIEGDRYEYEMNMLTQASQRYKITEVPIQTIYIDDNASSHFRPIKDGLLIYKNL
                     FKFALASFGGFLVDYGVYALALLLLTSLPTALRLLVANTIARICSATCNFALNKKLVF
                     NNEESIARTGVGYFTLALVLFLCDTALLYLFHQILGLNLYIVKLAVGIFLFLASWFVQ
                     KNIIFKERKSFSHEIA"
     gene            13352..14287
                     /locus_tag="U1041_001383"
     CDS             13352..14287
                     /locus_tag="U1041_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002918105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HEM4768493.1"
                     /translation="MKLLKKPFAYASIFGMLLTGGFTYSMLKTFVLSEAITTVAASNA
                     TANSQNTATSSSSTAATTATNVSTTDTSYTDDNIQINLETITTNNTTIYVADIQVSSP
                     EYLKTALAQNTYGTNVTAKTSETAAANNAILAVNGDYYGANSTGYVIKNGVLYRDTVR
                     DNAAYGDLAIYADGSFEVIYENEITAQELIDKGVVNLLAFGPSLVENGEIVVDTSTEV
                     GRAMSSNPRSAIGIIDENHYIIVVADGRTSESQGLSLYQMAEVMKQYGTQTAYNLDGG
                     GSSTLYFNGQVINNPTTNGNTISERAVSDIVYIGY"
     gene            14262..14678
                     /locus_tag="U1041_001384"
     CDS             14262..14678
                     /locus_tag="U1041_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768494.1"
                     /translation="MTLSTSVTNSTTRVSRTFISYLAITAFLFIFSRIYESLSYGEVS
                     IFMHYMFCVTLIGGAVLLGLLQLMPTLSRLSYNLWNSGVATITAGCLLRGIINLSGRS
                     TTLDQPYWYIGAGFLVLSLVGLFINPSTSNHRKTTT"
     gene            14837..16552
                     /gene="ilvD"
                     /locus_tag="U1041_001385"
     CDS             14837..16552
                     /gene="ilvD"
                     /locus_tag="U1041_001385"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEM4768495.1"
                     /translation="MTEKETLKNLRHRSSVYDSMVKSPNRAMLRATGMTDDSFEKPIV
                     GVISTWAENTPCNIHLHDFGKLAKEGVKDAGAWPVQYGTITVADGIAMGTPGMRYSLT
                     SRDIIADSIEAAMGGHNVDAFVAIGGCDKNMPGSMIAIANMDIPAIFAYGGTIAPGNL
                     NGKDIDLVSVFEGIGKWNNGDLTAEEVRQIECNACPGPGGCGGMYTANTMATAIEVMG
                     MSIPGSSSHPAESPEKKADIEEAGRAVVRMLELGIKPSDIMTREAFEDAITVTMALGG
                     STNATLHLLAIAHAANVDLTLEDFNDFQERVPHLADLKPSGKYVFQDLYNVGGVPAVM
                     KYLLKNGFLHGDRITCTGKTVAENLENFADLTPGQDVIMPLENPKRADGPLIILKGNL
                     APEGAVAKVSGVKVRNHTGPAKVFDSEEEAIEAVLTDEIVDGDVVVVRYVGPKGGPGM
                     PEMLSLSSMIVGKGQGDKVALLTDGRFSGGTYGLVVGHIAPEAQDGGPIAYLRTGDLV
                     TVDQDTKEITMHVSDQEIEERKKTTVIPPLYSRGVLGKYAHTVSSASKGAVTDFWRPE
                     RTGKK"
BASE COUNT         4923 a         3771 c         3189 g         4757 t
ORIGIN      
        1 gtcagatttg gagtgtaaaa cacgaacaaa tctgacaatc aaccactgcg ctgagatgtt
       61 gacactaact tcgagaagtg gtgcggggct tgagcccagc ctcttttctt gttaatgatg
      121 attttcagag agtgttaatc tataaaatag tcttttctga caattttata ctcttcgaaa
      181 atcaaaatta tccgttgtca acttaccttg atgagtgaaa agctccagtg gaggttttca
      241 gcctgttacc ttgaaataag atagtaacag agttctatct tcggcttcgt ttcctaggct
      301 acttttgatt ttcattgagt attaattaac catatccact atattatatc aaaaaaagag
      361 cctgacggct cttacagaac gtagacaaac tcctaaaaat ataaaaaatt gaagaagttt
      421 acgaaagata gcaagttatt aaactcttag aaacattgat atttcggcgt ttctgagagt
      481 tttttatttt caacataaag aaaaaagatt gaagaaattg tccaaaatgg actttttctt
      541 caatctgaaa agagcctgac ggctcttatc ttgtttagaa agattcttat tttctttttt
      601 tctcttcata gcacttttta tactttgcga ttttttcttg acggtaacta ctattaccaa
      661 taaaccgaag aagattgagc aacggagttc tattaatacc aaagatgcca atcaattcac
      721 agagaatctc aattcccagt cccatggtca ccaataggag aatcccccct attcgactcg
      781 aaacattgag caagagagag gtcagggaga ataagaaaga aatggcgtaa atcaccaata
      841 ccgtgccacg atgagtaagt cccagagaga gcaagcgatg atgcagatgc atcttatccg
      901 cttcatagat tttttgccca gacaattttc gacgaatgat ggctactaca gtatccgtaa
      961 taggcactcc aagaataatc atcggagtaa ccactgcaac agctgtcgaa tttttcagtc
     1021 cttgaaggga caagactcca atcataaacc caatgaaaag ggcacctgta tcgccaagat
     1081 aaatgatagc gggattatag ttatacggta aaaaaccaac aatcgccgca accaaaacaa
     1141 agatggttaa ggttaaaaaa atattgctat cattcaaaaa gaaataagac acaattccca
     1201 tcgttgtcag ggaaataatc gatactcccg aaaccagacc atccagacca tcaatcaagt
     1261 tgactgcatt cgtaatagaa acaatccaaa ggaccgttaa tagaaaagag agccaaacag
     1321 gaaattgaag gaaaggtcct ccaaaaggaa tcttaaagct atcaaaacga aattccgtaa
     1381 aaatccaaat gatcgtcgct gccgctagaa taccaaacat tttaggagca ggctttagct
     1441 ccttgacatc atcaatgaat cccgtaagaa cgataatgct ggatgctagg accaggggcc
     1501 agatataatg caagtaagtg ccatggtaat tgacacgggt aacaattcct ggtaaaaaac
     1561 ataaaacaga aatggtaaat gccacaaaga tagccagccc tcccgctgaa ggcatgggca
     1621 ccttatttat ccgccgtgca ttgggtttat cgactgctcc aaccttcagg gacataaaac
     1681 gaaccaaggg ggtcgcaatg gctgatatga ccatggttgt aataatgacc attatgtatt
     1741 ttagagcaaa aggaatcata ctgtcggaac cttcctaagc tcctcgattg ccgcaagtgg
     1801 aagcatcaaa gttccgtgtt cttgtaaagc aggtctggtc aacttagtat cattggtaaa
     1861 ttccaacatt cgtgagagaa tgtagcctgg atactgcttg gaacgatttt ctacattgat
     1921 aagaacggtc aagtagtagt gaccatccat tttatataat tccgattctt ctactggata
     1981 atcaaccgta ccaacaaaag taaacagatc ctctatcgtt ggaaattcca aaatatagta
     2041 aatatagcgc tcctgctcct cttcatctgc ttcttcctct tgctctacct cttccaaatg
     2101 acgaacggct gttgcatccg gtgcgctttt ctcacgaacg gtttgctcca aactcttgaa
     2161 aaactcatct ggagtcatac ttgcgacatc accaagttcc gacaaatctg taaattcatc
     2221 gaaattcaag ctctgatcca aatcagattt ggtaacaaag atgtccaccc gatctggctt
     2281 cggagtcaca cgaaaactca acataccgct ttctcggaaa gtcattggta aatccaattc
     2341 atccaaaaca gtatagaaga actcctctgt cttttcttgc ggaatgagaa agtccgaaag
     2401 ttccattcct ctctcttcca aatcatctaa ttttatagtg attttcaagg ttgaatcact
     2461 aatttgcttt actttcataa ctacctcatt cattgattca tcaatttctt aaaattgatt
     2521 gatcattttc aatactcata catatcttcc accattatac taaaaccaag ctcgaaagac
     2581 aaaagaaaag caggtctccc tgctcttaaa ataaaaatgt gataaaggca taaaccaata
     2641 aaatcgcccc taaaatgatg cggtagtaac caaaaaccgt gaaatcatgt tttttaacaa
     2701 agtctgtcaa gaaacgaata acaactaagg ataccaagta agccgtcaca ctagcgacta
     2761 gcaagatcca tacctgctcc atattcaggc tattgccatc taagaaatat ttaacagcct
     2821 tcaagccact ataaccaaac atggttggaa tcccaagaaa gaaggtaaaa tctgccgcca
     2881 cagatcggct ggttcccaaa ataatcgctc ccagaatggt cgcacctgag cgactagtcc
     2941 ccggaacgat gcttaagacc tggaaacacc caatcaacaa ggcagtttta taagacattt
     3001 tcgctaagtc cgtcacctgt ggctctacac cactgttacg gttttcaatc caaataaagg
     3061 caataccgta gacaatcaaa gcaatcgcaa tcggtaccat aaaattgaag tgcgcttcaa
     3121 accaattatc caacgggact gcaattagga tggacggaat acaggcaatg acaaccttgg
     3181 cccacaattg ccaagttaat tgaatatcac gcttggtttt tccaggctga aatggattca
     3241 attttttaaa gtaaatagtc ataactgcta gaattgctcc tagctgaatg acaatattaa
     3301 acatttctag gaagttctta ctttggttta acttcacgaa ctcttgaacc aaaattaaat
     3361 gtcctgtcga agagactggc aaccattccg ttaccccttc aatgattcct aaaaatatag
     3421 ccttcaacaa ttccaaaatc ataataaact ccttttcatc aattctctac attatatcat
     3481 aaaaaactcc ctattcatag tacaaggata ttgaaatttg tcagaatttt taatagaatg
     3541 gtgtaatacc atttaataag gagttattat gaaacataaa cttagtatct ttctgctaag
     3601 tcttcttgct gtattttcca tagcaacagg ggttcgggca gacgaatacc tgcgggtcgg
     3661 tatggaagct gcctatgcac catttaactg gacccaagaa gatgatagca acggtgccgt
     3721 tcctattgag ggaaccaatc aatttgccaa cggatatgat gttcaggttg caaaaaaaat
     3781 cgctgcatcc atggacaaag aactcttggt tgttaaaacc aagtgggaag gcttggtccc
     3841 tgctcttaca tctggtaaaa tcgatatgat tatcgccggt atgagcccga cagaagagcg
     3901 caagaaagaa atcgccttct cagatagcta ctatacttca attcctaccc tggttgttcg
     3961 ttctgatagt cagtacgcaa acgcaaccag cttggcagat tttgctggcg caaaaatcac
     4021 tgcccagcaa ggagtttacc tctatgattt gattgaccaa attgaagggg ctaacaaaca
     4081 gactgccatg ggagatttct cacaaatccg tcaagcttta gaatctggca ttatagacgc
     4141 ctatgtttct gaacgtccgg aaggtcgtac agcagaagct gcaaataaag cttttaaaat
     4201 ggttgaattg gcagacagtt ttgaaaccaa tgccgaagac gtgaccattg ctgtcggtat
     4261 gcgtaaagat gacgagcgta tcgctcaggt caacgaagtc ttagcaacta tttcagaaga
     4321 agagcaaatc gcacttatgg atgatatgat tgaaaaccag cctgttgaag aagccagcga
     4381 gggcgaaaca cctagtttct tcgcccaagt ttggaatatt gttgttaaca actggcaaca
     4441 acttctgcgt ggaactggga tgacattact catttccatc ctcggtacaa ttatcggtac
     4501 tgctatcggt ctcctcatcg gtgtcttccg tacagctcca aaagcagcaa acaaggcgct
     4561 tgctattggt caaaaagtgc tcggttggat tatcaatatc tacatcgaaa ttttccgtgg
     4621 tacaccgatg attgtacaat ccatggttat ttactatggt accgcccaag ccttcggact
     4681 caatcttgac cgcacacttg ccgctatctt cattgtatcc atcaacacag gtgcctacat
     4741 gagtgagatt gtccgcggtg gtatctttgc cgtcgataag ggccaatttg aagctgctac
     4801 tgctctcgga tttacccata atcagaccat gcgtaagatt gtccttccac aggttattcg
     4861 taacatctta ccagcgactg gtaatgaatt tgtcatcaat atcaaagata cttctgtatt
     4921 gaacgttatc tcagttgttg aactctattt ctcaggaaat actgtcgcaa cccaaaccta
     4981 tcaatatttc caaaccttta cggttattgc tattatctac ttcatcctaa cctttactgt
     5041 gacacgtatc ttacgcgcag ttgaaaagca ttttgataca gatacataca caacaggtgc
     5101 aaaccaaatg caagtcgagg tgccacatga ttaaaaatgt aattcttgaa atcaaaaatc
     5161 taaagaaatc atacggacaa aatcaagtcc tcaaagacat ctctattagc gttgaaaagg
     5221 gcgaggttat ctcaatcatc ggttcatctg gttcgggaaa atcaaccttc ctccgatcta
     5281 tcaacctttt ggaaacacca acagaaggac agattctata ccacggacaa gatgttttgg
     5341 ctaaaggata tgacttgacg acttaccgtg aaaaactagg tatggtattc caatccttca
     5401 accttttcaa caatctaaat gtattggaaa atgccattgt agcacaaact acggtactga
     5461 aacgagatcg agctgaggca gagaaaatcg ccaaggaaaa cctcaacaag gttggcatga
     5521 ccgaacagta ctggcaagcc aaaccaagtc aactctctgg tggacagaaa caacgtgtgg
     5581 ccattgcacg cgccctatct gttgacccag aagttatcct ctttgatgag ccgacttctg
     5641 ctctcgatcc agagatggtt ggggaagttc tcaaaaccat gcaagatttg gcaaaatcag
     5701 gattgacgat gcttatcgta actcacgaaa tggaatttgc ccgtgacgta tctgaccgcg
     5761 ttatctttat ggataagggt gtcatcgccg aagaaggcaa tcctcaacaa atctttgaaa
     5821 atccacaaga agaacgcaca cgtgaattcc ttcagcgttt tcttggttaa actcaatctg
     5881 ttccatagaa gactattact taccagtttc aaagctggta agttttttta gactaaaaaa
     5941 agaggaattc gcagaattcc ccctcctttt tggacatctc taaatggaac catttagatt
     6001 agttttcaaa tttcttgtgg tttttgtcgt aaaaatcaat caaacccaag gcagttgcaa
     6061 atgaaatatt gtcgatctta gcgcgacctt gtgcaagagc gataactgac atttcacgag
     6121 catttgtttc cttactgata cggtaacctg tgattttctt ttcacgaacc cagccaacaa
     6181 ctgcggcaac tttttcgtaa cttgtcatga gaaacccctt tcctttttat tcgtgcaatt
     6241 aagtataata cagttaaacc tattttgtca agtaaattgt tcggttttta ccatcatttt
     6301 gccctaagtg atgatagtat ttgcgtcctt atgtcttcga ccccctccgg attccctgga
     6361 aggaagatag tttgattacc tccttgtgca aaattattga gagtatccaa gtattggttg
     6421 gtcagcaaga tagacataat ctgctcttca gataggctaa catttgattc tttcagttca
     6481 cgaatcgaat ctgccagtcc gtctacgatc gccttacgtt gttgtgcaat acctacacca
     6541 tgcaagcgat ccttttcagc ttccgcctct gctgctgtga caatttttat cttgtcagct
     6601 tctgccaatt cctgggccgc aacccgtttc cgctgagctg cgttaatttc attcatagat
     6661 tgcttaacct cggcgtctgg ctctaccttg gtaattaagg ttttgacaat aacataaccg
     6721 taggttgaca tttcttctgc tacttgtttt tgtacctcaa gtgcaatctc atcctttttc
     6781 tcgaagagct catccagggt caatttaggc acagatgaac gcagggcatc ttcaatatag
     6841 gacttaatct gtgcttctgg gtgcatgagc ttgtaatagg catccgtcac attattttca
     6901 tttactcgat attgagttgc cacattcatt gtgacaaaaa cgttatcctg cgtcttggtt
     6961 tctaccacaa tttcactttg caacatccgc aattgaatgc gggctgcgat gacatcgact
     7021 ccaaatggta ttttaaagtt tatacctgaa gtagatgttt tttggtattt cccaaagcgc
     7081 tcaataatag cgaccgtctg ctgcttgaca acgtatagcc ctgaagcaat caaaatcaaa
     7141 gcaatcagta caaagaacaa gaaactacca ataaaaacaa ttggaccaag caccataatg
     7201 acctcctaaa ctagcatttt ataaagcgaa tcattttcat gaagattgat gtactgggga
     7261 tcaaattctt ccaagcgaga aataaactgc gcataatctt ttttatctcc tagggcaata
     7321 ccgattagaa ccggtcctgt tcccttattg gcacgtttga tatattcaaa acgagtaata
     7381 tcatcatttg gccctagaat ttcatttaca aattcacgaa gagcccctgg acgttgtgga
     7441 aaattaacaa caaagtagtg tttaattccc tcgtagataa gcgcacgttc ctccatttcc
     7501 ggcatcctgt tgatgtcgtt attaccacca gaaatgatac aacaaatggt ttgccccttg
     7561 atttggtcct tgactacctc aagagctgca atcgttgctg ctcctgctgg ctcagcaaca
     7621 atacccagct tagaatagag gtctaaaata gtcccagaaa tccatccttc atccacacca
     7681 atcaggcgat ctacgtattt ccgagccact tcgtaggtcg acttaccgac tttctgtacc
     7741 gcaataccgt cagcaaattt atcaatttgg tctaatttaa ccggacgacc tttatcaaaa
     7801 gccgctttca ttgaccgtgc cccacttgct tcaacaccaa caatcttaat ttcaggtgca
     7861 tgttctttca gataggccga aacgcctgca accagaccac ctcctcctat gggaactaaa
     7921 atttggtcaa aactaatggt ttgctcttcc gcttcttcca agatttcata ggccactgtt
     7981 ccctgaccag cctgcacatt ttcatcatcg aatgggtcta taaatgtttt cccgctttcc
     8041 tgagtataat cttgtgctgc cttggctgac tcatcgaagg tatcacctac gagccgaatc
     8101 tctacgtagt ctcctccgaa aaatttaacc tgccctattt tttgttgcgg agttgtaatg
     8161 ggcatgaaaa tcgtagcagg aatttgcatt tcctgacagg tgtaggccac accttgagca
     8221 tggttcccgg ccgaagcaca gaccactccg cgtgacttct catcatctgt caattgtgaa
     8281 atagcataat aggctcctcg aattttaaaa gagcgaacac gctgttcatt ttctcttttt
     8341 aaataaatag ttgcaccata tttttccgac aagtatcgac tataatccaa gggggtacgt
     8401 actaccacgc gcttaagaac ggagtatgct tgttctacat tttttgctgt aatcatagtt
     8461 ccattaattt ctttctatat ttattgtatc attattccct agaaaatcct agtatttata
     8521 cttatattca agctactagc atgttattca acagaaaacg aatgtttaat tttgtaaaga
     8581 tctatttatg aacaaaatgg gcaaaagagc tggaaaaacc agctctttta ttcattttcg
     8641 gagatagggg aaaaagggaa tgacatcccc tcatccgcca actcaaacct taaatgtatt
     8701 gccattactc aaagtaaagc tgactatccc ccctatctac catgatagtg tttaattata
     8761 gattttgaat gcgtcgtcat cattgcgtcc gacaaatggc attgctttgc ggagttctgc
     8821 acctactttt tcgatttcaa gattctctgc ttctttacga taagcttcca tacgtggacg
     8881 acctgcttta tagtcattta caaagtcatt tgcaaattta ccagattgaa tatctgcaag
     8941 gactgctttc atgttttctt tgacttggtc tgtaatcacg cgtggacctg atacatagtc
     9001 accaaattca gcagtgtttg agatagattg gcgcattttc ttgaagccac cttcgtagac
     9061 aaggtcaacg atgagtttca tctcgtggag aacttcgaaa tatgccaatt ctggtgcata
     9121 gccagcttct gtcaagactt caaaaccagc ttgcataagg gctgtcaaac caccgcagag
     9181 aacagcttgc tcaccaaaca aatcttcttc tgtctcttct ttgaaagttg tttccaaaag
     9241 accaacacgg gctgaaccaa caccttttgc ccagtccata gcgatgtgtt tagcattgcc
     9301 agtagcatct tgatacacag cgtaaagagc tggcacaccg aaaccttctt caaaggtacg
     9361 gcggaccaag tgacctggac cttttggtgc acacatgaag acatccacat ctgctggtac
     9421 cttgataaat tcaaagtgaa cgttgaaacc atgggcaaaa ccaagggcat tgcccgcttc
     9481 caagtttggt gcgatttctt cattgtaaag gtctgcttgg atttcgtctg gagccaagat
     9541 catgatgaca tctgcttgtt ttgctgcttc tgctacttca aaagtttcaa aaccgtcttc
     9601 ttttgccttg tcaaatgact tacctgcacg cacaccgatg atgacatcgt gccctgtatc
     9661 acgcaagttt tgagcatggg catgaccttg tgaaccataa ccgataacgg cgatacgttt
     9721 accgtcaagt gctgctactg ttacatcttt ttcatattgc attgttactg tcataatttt
     9781 ttctcttttc tatttttatt tgtagttttg gatgttcaaa gaaaatgaag gctagaccag
     9841 gcgatgtagg cgaagataga actaacgttc atcaagccaa atcaacgcag gataggtttt
     9901 agtatcgaaa aggattagtc tctactaaat ccagtcgcac ccgttcttgc gatattctta
     9961 atgccataag gctgaatcac ccgcaggagg gcgtcaatct tatctccatc acctgtcatt
    10021 tgaatggtaa tggagtgcgg tgccacatca acaacatttg ctctaaaggg ttggataatc
    10081 gctaaaattt ctgttcgttt tgttggcgga gctgaaattt taacaagaat cacctcacgc
    10141 tctaagtggg gaatgtccgt caaatcacgg acacggacca catcaatcaa gcggttcagc
    10201 tgtttgatga tttgttcgac ctcatcgtga ctggccacgt ctacaatcac cgtcacacgt
    10261 gagatgccat ctacttctgt tgggccgacg gagatggact caatattgat ttggcgacga
    10321 gataggacac ctgtaaaacg attcagaaca ccagatgaat ttcgcaattt agctgttaac
    10381 attctacgca ttgaacttca cccccaacat ttctgcattg ctcttacctg ctggcaccat
    10441 cggttgaaca tgttcacgat tagaaatatg aacctctatg agcattggtt tatcttctaa
    10501 gataactttc atgtcttcac tgagagtcgc tggattgtca aaactataat gactaattcc
    10561 gtaggcctct gccaacaatt ggaaattcgg ttcatcgtca aagacagatt ggctacgacg
    10621 cttttcatag aaggattcct gccattgacg aaccattcca agagagtggt tattgatcaa
    10681 tacaacctta atcggtacac catagccatt caaaatagcc aattcttggt tggtcatttg
    10741 gaagccgcca tcaccgacaa agatgattac ttctttatct ggattggcta atttggcacc
    10801 gatagctgca ggaataccaa agcccatggt tcccatgcca ccagatgtta caagttgacg
    10861 tgcatgtttg taggggtaga attgagcggc ccacatttga tgctgaccaa catctgtcac
    10921 gacaatggca tcaccttgcg tcaactgacc aattaattca attgccgcct gtggcttaat
    10981 aaccttttca tcttcatcat accaaaatgg cgcccgacgt ttgttttcca atacttgcgc
    11041 cgtccaatca gcatagcctg tttcgactgt ttctaaagca agtagagctt tcaaggttgc
    11101 cttagcgtca cccactactg gaatagccgt tttgacaact ttaccaattt ctgcgggatc
    11161 aatatcaata tgtgctaccg tcgcatttgg cgcataggtt gttggatttc ctgttaggcg
    11221 gtcatcgaat cgcgctccaa tattgataat gtaatcagcc tgatccatag ccatattggc
    11281 agcgtatgac ccgtgcatcc cccccatagc caaggataat tcatgctcaa tgggcattgc
    11341 acctaatcca aggagggttg aaactactgg aatacggtag cgctctgcaa aggcaactaa
    11401 ttctttattg gcatctgcat aattgacacc accaccagcc aatataactg gtttttgagc
    11461 ttggctaagc tgtttcaaaa ttttcttaac ctgcaaacca ttcggttcaa tcgttggctg
    11521 ataacttgga agttgaacag ttggatcgtg ataaaaatca acaactcttt cttggatatc
    11581 ttttggaaca tcaataacaa cgggacccgg tctacctgtt gttgcaatat ggagagcttc
    11641 tgtgatgact ctaggaatat ctgccgtatc ccgaatttgg taattgtact tggtaatcgg
    11701 cattgtcatc cccaagacat ccgcttcctg aaaagcatct ttaccgatac cacgtgttgc
    11761 gacttgacca gtaaaaacta aaagaggaac actatcaccc attgcgtccg caattccagt
    11821 aatggcattg gtagcacctg gcccagaggt tacaatggct acgcccacct ttcctgatga
    11881 tttagcgtat ccttcggcct cgtggaccgc tccttgttca tgacgagcca aaatatgctg
    11941 gattccctca tattgataaa tagcatcata taaaggcaaa actgccccac cgggataacc
    12001 aaaaacaagg tctactccta gctgatgcag ggtatccaaa atgagatagg accccgaacg
    12061 cggttggtct agttgaattt cttgcacgaa tattcctcct ctctgcaaat ttgttatcta
    12121 ctatattatc acaaggaagt agaatgtcaa gaaattttct gaaaattcct acatttgttc
    12181 gttttcttaa cgatttccta acattttctt aagtaaaact taagtaaatc ccttgactgg
    12241 cttggtttca gcttgctttt agaaaacttc agtattgtag tcccaacaag aaaaataaat
    12301 gaggtttagg atatgtatta tgtagtgata ccggcttacc agccagatga aaaattaatc
    12361 caactattag aaataatgaa aaacaggcta aattgtcagg tcatcgttgt ggatgatggt
    12421 agtactggcg catccaaaaa tattcttgaa atcgccaaaa cctatgccat tgttctccac
    12481 cacgatgtca ataaaggaaa aggccaagcc ttacggactg cctttagctt tatacaagat
    12541 ttgagaaagc ctggtgtcgt tgttaccgct gatgcagatg gtcaacacgc tgtaaatgat
    12601 attgaccgtg tcgcacgcgc tgccatgaac ctacccagtc gcctcatcct tggtgtccgt
    12661 caatttacta acgatattcc gctccgtagc cgtttcggaa acaaactgac tagagtattg
    12721 tttagactac aaactggtgt caatgtgtcc gatacacaaa caggcttgcg tggattccat
    12781 actgacttaa ttccattcat gttagatatt gaaggcgacc gctatgagta cgagatgaac
    12841 atgttaactc aggcaagtca acgctataaa attacggaag ttccaattca aactatttat
    12901 atcgatgata atgccagttc gcattttcgt cccataaaag atggactgct catttacaaa
    12961 aatctcttca aatttgccct ggcatctttt ggtggatttc tagttgacta cggagtgtat
    13021 gcacttgcct tattactact cactagctta ccaactgctc tacgcttatt ggtcgcaaac
    13081 acgattgctc gcatttgtag cgctacctgt aattttgcac ttaataagaa attagtcttt
    13141 aacaatgaag agagcatcgc acgaacaggc gtaggctact ttacactagc ccttgtcctc
    13201 ttcctttgcg atacagccct cctctatctc ttccaccaaa ttctaggact caacctctac
    13261 attgtcaaac ttgcagttgg tatcttcctt ttcctagcct cttggtttgt tcaaaagaat
    13321 attattttta aagaaaggaa atcattttcc catgaaattg cttaaaaaac cctttgccta
    13381 cgcatccatc ttcggaatgc ttttgacagg aggctttact tactccatgt taaaaacctt
    13441 cgtgctttcc gaggctatca caacggttgc tgcaagtaat gccacagcca atagccagaa
    13501 cactgctact tcatcgtcgt caactgccgc aaccactgca acgaatgtct ctacaacgga
    13561 tactagttac actgatgaca atatccaaat caacttagag actatcacta ccaacaacac
    13621 aactatttac gtcgcagata ttcaggtcag ctcacccgaa tatttaaaaa cagcacttgc
    13681 acaaaacact tacggtacaa acgtaacagc taaaacctca gagacagcgg cagcaaacaa
    13741 tgctatctta gctgttaacg gtgactacta cggagccaac tcgactggtt atgttattaa
    13801 gaatggagtt ctgtatcgag acaccgttcg ggacaatgca gcttatggag acttggccat
    13861 ctacgcagac ggctcatttg aggtcattta tgaaaatgag attaccgccc aagaattgat
    13921 tgacaagggc gttgtcaacc tcttagcatt tggtccatca ttggtcgaaa acggcgaaat
    13981 tgtcgtcgat acttcaacag aagtcggacg tgcaatgtca tccaaccctc gttctgctat
    14041 cggaattata gatgaaaacc actatatcat cgtcgtggcc gatgggcgaa catctgaaag
    14101 tcaaggactt tctctctatc aaatggccga ggttatgaag caatatggta cccaaacagc
    14161 ctataacctt gacggtggtg gttcgtcaac cctctacttc aacggccaag tcatcaacaa
    14221 tccaacaaca aatggaaata ctatctcaga aagggcggtg agtgacattg tctacatcgg
    14281 ttactaattc aactacaaga gtttcaagaa catttatctc ctacttagca ataacagctt
    14341 tcctgtttat tttcagtcga atctatgaaa gtctcagcta tggcgaagtt tcaatcttca
    14401 tgcattatat gttctgtgtg accctgattg gcggagctgt gttactcggt ttgctgcaac
    14461 ttatgcctac tctttcacgt ctctcttata atttgtggaa ttctggcgtt gcaactatta
    14521 cagctggttg tcttctccga ggtattatca acctatctgg acgttcaact accttagatc
    14581 aaccttattg gtacatcggc gcaggattct tagttctatc gttagtcggt cttttcatca
    14641 atccatccac aagcaatcat cgaaaaacga ccacttaatc tacaaataaa ttgtaagggc
    14701 acttaacatt cttaggtgcc ttttactgta gaatgaatta ttgaaaaatt cggaaatttc
    14761 caattagtta tcaaatcttt tatcgtttct ttcatatcta tgatataatg ggtaaaataa
    14821 gatagggaga agagtaatga ccgaaaaaga aacactaaaa aacctccgtc atcgtagttc
    14881 tgtctatgat tcgatggtca aatcaccaaa ccgcgctatg ctacgtgcta caggtatgac
    14941 agatgatagt tttgaaaaac cgattgttgg ggttatttcg acatgggctg aaaatacacc
    15001 ttgtaacatc caccttcatg actttggaaa attagccaaa gaaggtgtta aggatgcagg
    15061 tgcctggcct gtacagtatg gaaccattac ggtagcagat ggaattgcca tgggaacgcc
    15121 ggggatgcgc tattcattga cctctcgtga tattatagca gattctatcg aagctgctat
    15181 gggaggtcac aacgtggatg cctttgtcgc aatcggtggc tgtgacaaaa acatgcctgg
    15241 ttctatgatt gctatcgcca atatggatat tcctgctatc tttgcctacg gtggaaccat
    15301 cgcaccaggt aacctcaatg gtaaagatat tgacttggtt tctgtctttg aaggaatcgg
    15361 aaaatggaac aacggcgact taactgctga agaagttcgt caaatcgaat gcaatgcctg
    15421 ccctggacct ggtggttgtg gtggtatgta cacggccaat accatggcta ctgccattga
    15481 ggtaatgggt atgtccatcc ctggttcttc ttctcaccct gctgaatctc ctgagaaaaa
    15541 agcggatatc gaagaagctg gtcgtgctgt tgtacgcatg ctagaacttg gcatcaaacc
    15601 atctgacatt atgactcgtg aagcctttga agatgccatt acagtcacca tggcactcgg
    15661 tggttcaacc aacgctaccc ttcaccttct agccatcgct catgctgcca atgtcgacct
    15721 cacacttgaa gacttcaatg atttccaaga acgagtacct cacctagctg acctcaaacc
    15781 atctggtaaa tacgtcttcc aagacctcta taatgtcggc ggtgtccctg cggtcatgaa
    15841 atacttgctc aaaaacggct tccttcatgg cgaccgcatc acatgtacag gtaaaaccgt
    15901 tgctgaaaac ttggaaaact ttgcagactt gacaccagga caagatgtca ttatgccact
    15961 tgaaaatcca aaacgtgcgg atggcccact catcatcctc aagggtaacc tagcacctga
    16021 aggtgcggtt gcaaaagttt ctggcgtgaa agttcgtaac cacactggtc cagccaaggt
    16081 ctttgactca gaagaagagg cgattgaagc agtcttgact gacgaaatcg tagatggaga
    16141 tgtagtcgtt gttcgctatg ttggaccaaa aggtggtcct ggtatgcctg aaatgctatc
    16201 actttcttct atgattgtcg gaaaaggcca aggtgacaag gtagcccttc taacagacgg
    16261 tcgtttctct ggtggtacct atggactggt tgttggacac atcgcacctg aagctcagga
    16321 cggtggacca attgcctacc ttcgtactgg agatttggta accgttgatc aagataccaa
    16381 agaaatcacc atgcacgttt ctgaccaaga aatcgaagaa cgcaagaaaa caactgttat
    16441 tccaccactc tactctcgtg gtgttctcgg aaaatacgcc cacactgtat cctctgcctc
    16501 taaaggagcc gttaccgact tctggagacc ggaacgtacg gggaaaaaat aaaagaactc
    16561 gtaaatccac agggaggaaa ctatatggtc aaactacaag attcgacctc tcctctgact
    16621 tccaataagc aaccgcataa
//
LOCUS       DASFQS010000053        15778 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.054, whole genome shotgun sequence.
ACCESSION   DASFQS010000053 DASFQS010000000
VERSION     DASFQS010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15778
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.054"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..304)
                     /locus_tag="U1041_001386"
     CDS             complement(<1..304)
                     /locus_tag="U1041_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HEM4768496.1"
                     /translation="MLDQIKAHLLDSINDIVSSANQFVLHPEKDFSRQSQLTMKTMIQ
                     AILTMGGNTLAKELLDLDLPVSQSAFVQRRYQIKHQAFKALFTNITSKIPISDNLPI"
     gene            389..1708
                     /locus_tag="U1041_001387"
                     /pseudo
     CDS             389..1708
                     /locus_tag="U1041_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941399.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
     gene            1882..3429
                     /gene="cls"
                     /locus_tag="U1041_001388"
     CDS             1882..3429
                     /gene="cls"
                     /locus_tag="U1041_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEM4768497.1"
                     /translation="MKKLWKIIYSRVFIVLALLLLTVFAIFWVVGSLAVYVPAILTVL
                     QLFSIIVAISIINRPMNASFKLTWIIFVIGIPIFGALFYFILQSNLETQRYRRTFKRQ
                     AAVMREYGHTSEKVMKGLAGEDKEQLKLAHYMSEYVGYPLHTNTDAVYFPSGEAKFEA
                     LLEELKKAEQYIFMEYFIVDFGYMWESILTILKEKAEQGVEVRFLYDGMNSLSLLPYN
                     YYKTLRSYGIKAKVFSQIIPALSTVQNNRDHRKITVIDGKVAFTGGVNIADEYINQKE
                     RFGYWKDAAIMVKGEAVANFTNMFLQMWNYNEKTETDDLKYLKTHKDLETETVDAEGF
                     FLPYGENPFDGDEVAKRVCLDMIQSATDYIYIMTPYLVLDDEMIDNLTYAAKRGVEVR
                     ILLPHIYDKKSAYLAARTDFPTYLEAGIEIFEFQPGFVHSKVVLVDDKKATVGTVNMD
                     FRSFYLNFECGLYIYNHSTVLAAIKDDFTQSFKKSQQINLLTFHKTYSWYKRLGGALL
                     RIISPLL"
     gene            3586..5799
                     /gene="recJ"
                     /locus_tag="U1041_001389"
     CDS             3586..5799
                     /gene="recJ"
                     /locus_tag="U1041_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEM4768498.1"
                     /translation="MIKPNYDWQLLTGFSDEQFIKVAKKEGLDPVAAKLLYERGIQSA
                     EALQAFLQPSLEDLHDPYLLHDMDKAVERIRRAIEDYEQILIYGDYDADGMTSASILK
                     ETLEEMGAEVQVYLPNRFTDGYGPNQSVYKYFIEQQGISLIVTVDNGVAGHEAIAYAQ
                     EMGVDVVVTDHHSMQETLPNAYAIVHPEHPDGNYPFKHLAGCGVAFKLACALLETVHA
                     DLLDLVAIGTIADMVSLTGENRVMVKYGLSLLKQTERAGLQELMKIAGIDVDSLDEET
                     VGFQLAPRLNALGRLDDPNPAIELLTGFDDEEAHQIARMIDSKNVERKDVVQAIYDEA
                     KTMLRRDRPVQVLAKEGWNPGVLGIVAGRLLEELQQPVIVLSIEDGKAKGSARSVEAV
                     DIFKALKDHQDLFIAFGGHAGAAGMTLEVDKLEELALTLTDYIIENKLDLSSKSSLVL
                     DEELDLEELTLDTLKSFEKLAPYGMDNKKPVFYIRDFQVETARTMGQNNAHLKVRITK
                     GAAGFDVVAFGKGNLALEFSQAKGLELAVTLSVNQWNGNTSLQLMLVDARVNGVQLYN
                     IRGKQHPIPAGVPILDIENPVADNKAIVLANLPEDLSSLRSYFQEREFEAIYFKNEIA
                     KPYYLDGYGSREQFAKLYKTIYQFDEFDVRYKLKDLAGYLKIKDSLLVKMIQIFQELE
                     FVTITDGVMRINKGAQKREISESQIYQELKETVIQQELMALGTVQEIYEWLCGRV"
     gene            5778..6947
                     /locus_tag="U1041_001390"
     CDS             5778..6947
                     /locus_tag="U1041_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3114 domain-containing protein"
                     /protein_id="HEM4768499.1"
                     /translation="MAMWSRLMTVEALVVVGVIGTLLYAHWFIRQKSLLKNLEQITEI
                     KHALIELRRVGWSERAIKKVFLKQLLPLKQEDIPAFVQNFIKEATIFASTSFYQLIRV
                     DSRSLSQEKATALLEQSINMLDFPEELSHGILPELLQKMDVNCPPHHPFWRYFAKLVD
                     KAFPVRELEVKRPLNRQVHQLRYLISYQQAFWVRQQFGKGNTDWQALIAYLRSLPRWS
                     YRLRESARLHNKQLFGKKNQKTLPVNMKILIHFHSEFILNQDGQFALILEERPHVNGV
                     VNGASFNYARANNKRHRQLDMAPVGRLDPVFRKELLRSKMGVYLSPTRFRRYQKGRNE
                     VGWEQSYFNQQGSFSYGGHSRAACVANLRRRFAKDIGLKCTKKQFHGIMKSKNYF"
     gene            6962..7474
                     /locus_tag="U1041_001391"
     CDS             6962..7474
                     /locus_tag="U1041_001391"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEM4768500.1"
                     /translation="MNLKDYIATIPNYPKEGIEFRDISPLMADGNAYSYAVREIVQYA
                     TDKQIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLT
                     MHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGIVAGCAFLIELDDLKGREAIG
                     DYDYKVLMHY"
     gene            7578..8519
                     /locus_tag="U1041_001392"
     CDS             7578..8519
                     /locus_tag="U1041_001392"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HEM4768501.1"
                     /translation="MPIKIEKSLPAVEILRKENIFVMDSDRASHQDIRPIKILILNLM
                     PQKIVTETQLLRLLANTPLQLEVEFLYMASHESKNTHSDHLKQFYKTFEQVRDSYFDG
                     LIVTGAPVENLPFEEVDYWQELTQVFDWSKTHVYSTLHICWGAQAGLYARYGVPKHSM
                     SRKLSGVYCQEVTNPTSPLMRGFDDEFRSPHSRYTEVREADIAHLSGLTILSQGPEVG
                     LSILASKDLREIYSFGHLEYDRDTLAKEYQRDCIAGKNPHLPENYFKEDDPTSKPSLS
                     WNLPAAQFFTNWVNYAVYQETPYDWHIFEQSAQSASL"
     gene            8529..9203
                     /locus_tag="U1041_001393"
     CDS             8529..9203
                     /locus_tag="U1041_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HEM4768502.1"
                     /translation="MNYSQQFRQGHLVLPAAILFHYQELFPSADDFLIWQFFLYQNSS
                     SVESLAPSEIAQATGKTVAQVNQAIENLQDAGLLEFKTISIAGEIEMIFDALPAFEKL
                     DALLTPKQAVEIVQPENDLKTLVGDFERELGRFLSPFEIEDLQKTIEDDKTSIDLVRA
                     ALKEAVFNNKTNWKYIQAILRNWRREGITTVAQVEAKNAEREIQTPKNVTVSSDFLDA
                     MDLWKD"
     gene            9205..9888
                     /locus_tag="U1041_001394"
     CDS             9205..9888
                     /locus_tag="U1041_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N(1))-methyltransferase"
                     /protein_id="HEM4768503.1"
                     /translation="METKLSKRLETVASFVPQGARLVDVGSDHAYLPLFLVEQGRIDF
                     AIAGEVVQGPYQSALQNVEQAGQTEKILVRLANGLGAFERSDQMTAVTIAGMGGRLIA
                     EILEAGKEKLATIERLILQPNNREDDVRRWLEKNGFRLVAEKILEENGKLYEVLVAES
                     GQMRLSEVEHRFGPYLLEEASPVFVKKWRRELEKLSSALEQVPSERQGDRFAISQKIQ
                     QIQEVVHVS"
     gene            9878..10672
                     /locus_tag="U1041_001395"
     CDS             9878..10672
                     /locus_tag="U1041_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000881127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEM4768504.1"
                     /translation="MLASQVIERYQAFCPPSLAMEGDVKGLQIGTLNKEIQRVMVALD
                     IRETTVAEAIDKKVDLIIVKHAPIFRPIKDLVADNPQTKMYLDLIKHDIAVYVSHTDI
                     DVVEGGLNDWFCELLEIQDTTYLIETAEGQGLGRVGTIAEQTLEELALKVKEVFSLDA
                     VRLVTYGHQAKQYVNRVAICGGSGGSYYHEALAKGADVYITGDIYYHTGQDMLTQGLQ
                     AIDPGHHIEALFIKKIAELLEIWKVKEGWDVEILPSTVSTNPFRHL"
     gene            10848..11672
                     /locus_tag="U1041_001396"
     CDS             10848..11672
                     /locus_tag="U1041_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEM4768505.1"
                     /translation="MTWFTNQSVVLQALLGGLFTWFCTIVGSAVVFFFKTVSRRLLDT
                     MLGFAAGVMIAASFWSLLAPSIEYAESSYGNLAWIPAAVGFAAGGIFLRLVDAWVPHL
                     HLGNDKDKAEGGGEKDRKNLSKTALLFLAITIHNIPEGLAVGVTFGALASNYSPAAFI
                     GAIGLAIGIGIQNIPEGAALAIPIRTDGASRWKAFYWGSMSAIVEPIAAVIGAFAVTF
                     MTPILPYALSFAAGAMIFVVVEELIPESQTNGNTDIATLGLMAGFIIMMILDVALG"
     gene            11770..12639
                     /gene="rfbA"
                     /locus_tag="U1041_001397"
     CDS             11770..12639
                     /gene="rfbA"
                     /locus_tag="U1041_001397"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002276675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEM4768506.1"
                     /translation="MKGIILAGGSGTRLYPLTRAASKQLMPIYDKPMIYYPLSTLMLA
                     GIKEILIISTPQDLPRFKDMLGDGSELGISLSYAEQPSPDGLAQAFIIGEEFIGTDSV
                     ALILGDNIYHGNGLTKMLQRAASKEKGATVFGYQVKDPERFGVVEFDADMNAVSIEEK
                     PEVPKSNFAVTGLYFYDNDVVEIAKNIKPSPRGELEITDVNKAYLERGDLSVELMGRG
                     FAWLDTGTHESLLEAAQYIETVQRLQNVQVANLEEIAYRMGYITKEQVHELAQPLKKN
                     EYGQYLLRLIGEA"
     gene            12639..13232
                     /locus_tag="U1041_001398"
     CDS             12639..13232
                     /locus_tag="U1041_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018029578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HEM4768507.1"
                     /translation="MTENFFGKTLAARPVEAIPGMLEFDIPVHGDNRGWFKENFQKEK
                     MLPLGFPESFFAEGKLQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREG
                     ETFGNTYQTVIDASKGIFVPRGVANGFQVLSDFVAYSYLVNDYWALELKPKYAFVNYA
                     DPSLDIQWENLEEAEVSEADENHPFLKDVKPLRKEDL"
     gene            13232..13717
                     /locus_tag="U1041_001399"
     CDS             13232..13717
                     /locus_tag="U1041_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEM4768508.1"
                     /translation="MFQAFLEIAEQLNKLGIVPLLLGSVGLERRTGRDWQAGDLDIHV
                     PSDPRGWEAPDDERIYQADALISMMNQLGYVLVDRHEHEFHKDGLSVEFGGLHSLPEF
                     AGVELEDLEELETAGVRYYLPTLEQYLKIYQASSKDSYRAENNNQKDFAKIAYLKEIL
                     R"
     gene            13746..14792
                     /gene="rfbB"
                     /locus_tag="U1041_001400"
     CDS             13746..14792
                     /gene="rfbB"
                     /locus_tag="U1041_001400"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000134275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEM4768509.1"
                     /translation="MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN
                     KANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTN
                     FIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP
                     YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY
                     GEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILAKMGQPKD
                     AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTNFSEGLEETIQWYTDNQDWWKAEKE
                     AVEANYAKTQEVIK"
     gene            14847..15698
                     /gene="rfbD"
                     /locus_tag="U1041_001401"
     CDS             14847..15698
                     /gene="rfbD"
                     /locus_tag="U1041_001401"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019780653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEM4768510.1"
                     /translation="MILITGANGQLGTELRYLLDERGVEYVAADVAEMDITDADKVDA
                     FFAEVKPSVIYHCAAYTAVDMAEDEGKELNYKINVTGSENVAKAAAKYGATLVYISTD
                     YVFNGELPVGQEWQVDDQPDPQSEYGRTKRLGEEAVEKFADKFYTVRTAWVFGNYGKN
                     FVFTMQNLAESRDTLTVVNDQHGRPTWTRTLAEFMVHLVETGQEFGYYHLSNDAAEDT
                     TWFDFATEILKDTNTKVLPVDSSQFPAKAKRPFNSTMSLDKAKATGFVIPTWQEALEA
                     FYKQEKK"
BASE COUNT         4584 a         3009 c         3673 g         4512 t
ORIGIN      
        1 ggatagggag attatcagag attggaattt tagaagtaat attggtaaac agggctttaa
       61 aagcttggtg tttaatctga taccgtcgtt gaacaaaggc agattgagag acaggcaaat
      121 ctaaatcaag tagctctttg gctaaggtat taccacccat ggtcagtatg gcttgaatca
      181 tggttttcat agttagctga ctttgccgac taaaatcttt ttcaggatga agcacaaact
      241 gattggcact agaaacgatg tcgttaatac tatcaagtaa atgagcttta atctgatcta
      301 gcatgacttt tcccctttta tttttagtgt accatagaaa aaactaacct accacaaaac
      361 gtgataggtt agttaactta atgacattgg ggatagggta ttcggtggtt cgctcaatca
      421 aaacatgccc tttgaaatgg aagtgaccag tcttggtaag gatagctttt tggcgcaggt
      481 gaccgaaatg gtccgtcaag cgcaaaacca gaaatccaag cttgaaaata tggctgaccg
      541 cgtagcctct tggctcttct atgcagcttt aattgtgggg attttggcct ttatttattg
      601 gaccatgacg gctaatcttg cctttgcctt gatgatggca gtttctgttt ttgtcattgc
      661 ctgtccgcat gcccttggtt tagccatccc tcttgttgtg gcgcgtttga ccacgatttc
      721 ttcaaaaaat ggtcttttgg ttcagaaccg aacagctctt gaacaggtta accagattcg
      781 gtttgccttg atggataaga ccggaacctt gaccgacgga aaatttcaag ttcgccacag
      841 tcaagatttg gttgagggag cggatgcgct ggccaaaatg gcagcgttag aagttctttc
      901 aacccaccca attgcccttt cgattgtgga ggcggcaggt ccacttttct atgaagcaga
      961 acgggttgag aatatccctg gtagtgggat tcgaggcgtc ttggatggaa ggatttatga
     1021 aattatgtcc tacaaaggtg tgcaggaaat aggtttgtca gtggatcagg acgtgattgc
     1081 tccctatctt gatttgggtc taaccttgag ttttttggtg actgatcatg tggtcttggg
     1141 atttgtagcc ttgggagacc agataaaaga agatgctaaa gattttgtag caggcttgaa
     1201 agcgcagggt attagtcctg tgatgttaac gggtgacaat ccagctaccg cacaaaaagt
     1261 agccattcag ttgggcatag aggattaccg agctgaactt aaaccagagg ataaggcaaa
     1321 actggtcaag gactatcagg cgcgtggggc agttcttttc atcggcgatg gggtcaatga
     1381 ttcgcctgct ctagcgacgg cagatttagg ctttgccatt ggcgcaggaa cttctgttgc
     1441 catccactct gcagacgtgg tcttggttca atccaatcca tcagcagtct tggatatgtt
     1501 gagcattgcc aagacaacca tccgcaaaat gaggcaaaat ctctggtttg gggcaggata
     1561 caacatcatt gccattcctt tagctgctgg aatcctttat ccaagcatgg gcattatggt
     1621 ggatccttta ttggcggccg tgctcatgag tctatcgaca gttattgtcg ctatcaatgc
     1681 tatgggttta cgttacggta aaccgtagaa attttgacag ataatatata taagtaaaac
     1741 accggtctat gtcggtgttt tatgatgtag gagatagggg tgctgttttc aagtaagaac
     1801 tgcgagaaat ctactgcgat aattagtagg atatttgact ataatctggt ataatgggaa
     1861 aaaacatcgt gagagtgtag tatgaaaaaa ttgtggaaaa ttatttatag tcgggttttt
     1921 atagttcttg cccttttatt attgacagtc tttgcgatat tttgggtggt tggctcacta
     1981 gcagtctatg tcccagcaat cttaacggta ttacaacttt tttctataat cgtagccatt
     2041 tccatcatta accggcccat gaacgcaagt tttaagttga cttggattat ctttgtcatt
     2101 ggtattccga tttttggtgc cctcttttac tttatcctcc agtccaacct ggaaacccaa
     2161 cgctatcgtc gaacttttaa gcgacaggca gcggttatgc gggagtacgg acacacctct
     2221 gaaaaggtca tgaagggctt ggcaggagag gataaggagc agctcaaact agctcactac
     2281 atgagcgagt atgtcggcta tcctctgcat accaatacag atgcggttta ttttccgtcg
     2341 ggggaggcca agtttgaggc actcttagag gagttgaaaa aggcagagca gtacatcttt
     2401 atggagtatt tcattgtcga ttttggctat atgtgggagt ctatcctgac cattctcaag
     2461 gaaaaagcag agcagggagt ggaagtgcgg tttttgtacg acggcatgaa ttccctcagt
     2521 ttgctcccct ataattacta caagacccta cgttcttatg gtattaaggc caaggtcttt
     2581 tcgcaaatta tcccagccct gtcaaccgtt cagaacaacc gtgaccaccg taaaattact
     2641 gttattgacg gcaaggttgc cttcacaggt ggggtcaaca tcgcagacga gtacatcaat
     2701 caaaaagaac gatttggtta ctggaaggac gcagccatta tggtcaaagg cgaggctgtt
     2761 gccaacttta ccaatatgtt cctacaaatg tggaattaca atgaaaagac agagacagat
     2821 gacctaaaat acctcaaaac gcataaagat ttagagacgg aaaccgttga tgccgaaggt
     2881 ttcttccttc cgtatggcga gaatccattt gatggagatg aggtagccaa acgagtctgc
     2941 ctagacatga ttcagtcggc aacggattat atttatatca tgacacccta cctagtgttg
     3001 gatgatgaaa tgattgataa tttgacttat gcagcgaagc gtggagtcga ggttcgcatt
     3061 ttactaccgc atatctacga taaaaaatca gcttatttgg ctgctcgtac tgattttccg
     3121 acttacttgg aagcaggaat tgaaatcttt gaattccagc ctggatttgt ccattccaaa
     3181 gttgttttgg tcgatgataa gaaagctact gttggtacgg tgaatatgga ttttcgctct
     3241 ttttatctta attttgagtg tggtctctat atttacaatc actcgacagt tttggcagct
     3301 attaaggatg actttactca gtccttcaaa aaatcacagc aaattaacct tctaaccttc
     3361 cataaaacgt actcttggta taagcgtttg ggaggagccc tactgcgaat tatttcgccg
     3421 ttattataaa ttgcaatatt cgttcttcat ggagcaaggg atcgacattc tgtttcggtc
     3481 ttaccttgct ccatttttct tggaaaatga tataatagaa agatagttta tactcggaaa
     3541 agttacaggc tacttgtgat tttgagtatt aaggagtaaa aaaacgtgat aaaacctaat
     3601 tatgactggc aattattgac tggtttttct gatgaacaat ttatcaaagt cgctaaaaaa
     3661 gaaggattgg accctgtagc tgcaaagtta ctctacgaac gtggtattca gtcggcggaa
     3721 gctttgcaag cttttttaca accaagctta gaagaccttc acgatcccta tttactacat
     3781 gatatggaca aggcggtaga gcggattcgc cgagcaatcg aagattacga acaaattttg
     3841 atttatggag attatgacgc agacggcatg acctcggcat ctattctgaa agaaactctg
     3901 gaggaaatgg gggcagaagt ccaagtttat cttcccaacc gtttcacaga tggttatggt
     3961 cccaatcagt cggtttataa gtattttatc gagcaacagg ggatttctct tattgtgacg
     4021 gtggacaatg gcgtagcggg tcatgaagcg attgcctatg cccaggaaat gggtgttgat
     4081 gttgtcgtga cagaccacca ttccatgcag gaaacccttc ccaatgccta tgcgattgta
     4141 catccagagc atcccgatgg aaattatccc ttcaaacatt tggcgggctg cggcgtggct
     4201 tttaaattgg cctgtgctct tcttgaaacg gttcatgcag acttgctaga cttagttgcc
     4261 ataggcacca tcgctgatat ggttagccta acaggcgaaa accgtgttat ggtcaagtac
     4321 ggtctttccc ttctcaaaca gactgagcga gcaggtcttc aagaattgat gaaaattgca
     4381 ggaattgatg tagatagcct tgatgaagaa acagttggtt tccaacttgc tccgaggttg
     4441 aatgcccttg gtcgactcga cgatcctaat ccagccatcg aattactgac tggttttgat
     4501 gacgaagagg cccatcaaat tgcccgcatg attgacagta aaaatgtaga acgcaaagac
     4561 gtcgtccaag caatttacga tgaagcaaaa accatgctcc gtcgggatag acctgttcaa
     4621 gttctggcta aagaaggttg gaacccaggt gttttaggga ttgtagcagg acgcctacta
     4681 gaagaattgc agcaacctgt tatcgtcttg tctattgaag atggtaaggc aaaggggtcg
     4741 gctcgttctg ttgaagcagt tgacattttc aaggccctta aagatcatca ggacctattt
     4801 atcgcctttg gtggtcatgc tggtgcagca ggtatgacct tggaagttga caaacttgaa
     4861 gagcttgctc taaccttgac agactacatt atcgaaaata aattggattt atccagcaag
     4921 tcttcgctgg tcttagatga agaattggac ttggaagaat taactcttga tacgctaaag
     4981 tcctttgaaa aattagcacc ctacggcatg gataataaaa agcctgtatt ctacatcaga
     5041 gactttcagg tggaaacagc aagaaccatg ggacaaaaca atgctcacct gaaagtacga
     5101 attacaaaag gtgctgcagg atttgatgtc gttgcttttg gtaagggcaa tctagccttg
     5161 gaattttcac aggccaaggg cttagaacta gctgtcacct tgtctgtcaa tcaatggaat
     5221 ggcaatacca gtcttcagct catgttggtt gatgctcgcg tcaatggtgt tcaactttat
     5281 aatattcgtg gaaagcaaca tcctattcct gcaggagtcc caattttgga cattgaaaat
     5341 ccagtagcag ataacaaagc aattgtcttg gctaacttgc ctgaggacct cagtagtctg
     5401 cgtagctatt ttcaggaaag agaatttgaa gccatttatt ttaaaaacga aattgccaaa
     5461 ccgtactatc tagacggtta tggtagccga gaacaattcg ctaaattgta taagactatt
     5521 taccaatttg atgagtttga tgttcgctat aaactgaaag atttagctgg ttacttaaaa
     5581 attaaggaca gtctcttggt taaaatgatc cagattttcc aagaattaga atttgtcacg
     5641 attacggatg gggtcatgcg gatcaacaaa ggggcacaga agcgagagat ttcagaaagt
     5701 caaatatatc aagaattgaa agaaacagtt atccaacaag agttgatggc gcttggcacc
     5761 gttcaggaaa tttatgaatg gctatgtggt cgcgtttgat gacagtagaa gctctggttg
     5821 ttgttggagt aattggaacg cttctctacg ctcattggtt tatcaggcag aaaagcctgt
     5881 tgaaaaatct tgaacagata actgaaataa agcacgcact gattgaatta cggcgagtag
     5941 gatggtcaga aagagctatc aaaaaggttt tcctgaaaca actgttgcct ctaaaacaag
     6001 aagacatccc agcatttgtt caaaatttca taaaagaagc tactattttt gcctcaacta
     6061 gcttttatca gttgataaga gttgacagtc gctctttaag ccaagagaag gcgacggcct
     6121 tattggagca aagtataaat atgttagatt ttcctgagga attaagtcac gggatattac
     6181 ctgaactttt gcagaagatg gatgtgaatt gtcctccaca ccatccgttt tggcggtact
     6241 ttgctaagct agttgataag gcttttccag ttcgggaatt agaagttaaa cggccgttaa
     6301 acagacaggt ccatcagctg cgctatctta tttcctatca gcaggctttt tgggtacgtc
     6361 agcagtttgg aaaaggaaat acagattggc aagctctgat agcctattta cgtagcctac
     6421 ctcgatggtc ttaccgctta cgagaatctg cccgcctgca caataaacaa ctgttcggca
     6481 agaaaaatca gaagaccttg ccagtcaata tgaagatttt gattcatttt cacagcgaat
     6541 ttatcctaaa tcaagatgga caatttgcct tgattttaga agaacgacct catgtcaatg
     6601 gcgtggtaaa cggggcttcc tttaattatg ccagagctaa taataagcgt catagacaac
     6661 ttgatatggc tccagttggc agactggatc ccgtttttcg gaaagaattg ctacgctcaa
     6721 agatgggagt ctatttatcg cctactcgct ttcgtcgcta ccaaaaagga agaaatgagg
     6781 ttggctggga gcagtcttac tttaatcagc aaggaagctt ttcctatggt ggacatagta
     6841 gggcagcttg tgtggcgaat ttgaggagac gatttgctaa agatataggt ctgaaatgta
     6901 ccaaaaaaca atttcatggt ataatgaaga gtaaaaatta tttttaaaaa gagagagaca
     6961 aatgaactta aaagattaca tcgcaacaat tcctaactat ccaaaagaag gtatcgaatt
     7021 ccgtgacatt agccctttga tggcagatgg aaatgcttat agctatgcag tacgtgaaat
     7081 cgttcagtat gcgacagata agcaaatcga tatgattgtt gggccagagg cgcgtggttt
     7141 catcgttgga tgtccagttg cctttgaatt gggaatcggt tttgcaccag ttcgtaagcc
     7201 aggtaagtta ccacgtgagg ttatctcagc tgattatgaa aaagaatatg gtgtcgatac
     7261 attgacgatg catgcagacg caatcaaacc aggacaacgt gtcttgattg tcgatgactt
     7321 gttggcgact ggtggtactg taaaagcaac gatcgaaatg attgaaaagc ttggcggtat
     7381 cgttgctggc tgtgccttct tgattgagct agatgatttg aaaggccgcg aagcaatagg
     7441 tgattacgac tacaaggttt tgatgcacta ttaatctaag gttatagcca aaacttataa
     7501 ctggtcctat ttttattcta attgaattgc atagcaacct gtcttataat aaatataaga
     7561 aaattgggag gttgcttatg ccaattaaaa ttgaaaaatc attaccagca gttgaaattt
     7621 tgagaaaaga gaacattttt gtgatggata gtgaccgagc tagtcatcag gacattcgtc
     7681 ctatcaaaat ccttattctc aatctcatgc cacagaagat agtgacggag actcagttgc
     7741 tccgtctttt ggctaacact cctttacagc tagaggttga atttctctac atggctagtc
     7801 acgagtccaa aaatacacac tcggaccatt tgaagcagtt ttataagact tttgagcagg
     7861 tcagggatag ctattttgat gggctcatcg tgacaggagc accagttgaa aacttacctt
     7921 ttgaggaagt tgattactgg caagaactta ctcaagtttt tgattggtca aaaacacatg
     7981 tttattcaac attgcacatt tgttggggtg cacaggcagg tttgtatgca cgctatggtg
     8041 tacccaaaca cagtatgtct cgaaaactat caggggtata ttgtcaagaa gtgactaatc
     8101 caactagccc tcttatgcgt ggatttgacg atgaatttcg ttcaccacac tctcgttata
     8161 cggaagtaag agaagcagat attgcccatc tgagtgggtt gacgatttta tcacaaggtc
     8221 cagaagttgg cctatctatt ctagccagca aggatttaag agaaatttat agttttggac
     8281 atttagagta tgatagggat acactagcta aggaatatca acgtgattgt atagctggaa
     8341 aaaatcccca tttaccggaa aattatttca aagaagatga ccctacaagc aaaccatctc
     8401 tctcttggaa tttaccagca gcacaattct ttaccaactg ggtgaattat gctgtctatc
     8461 aagaaactcc atacgactgg catatctttg aacaatcagc ccagtcagct agtctttaaa
     8521 gaggaagtat gaactattca cagcaatttc gtcagggaca tttggtcctg ccagcagcaa
     8581 tattattcca ctatcaagag ctttttccgt cggcagatga ttttttgatt tggcagtttt
     8641 tcttatatca aaattcctca tctgtcgaat cattagcacc tagtgagatt gctcaagcta
     8701 ctggtaaaac agttgctcag gtcaatcaag ctattgaaaa tctccaagat gcgggactct
     8761 tagaatttaa gacaatcagt attgctggtg aaattgaaat gatattcgat gcgcttcctg
     8821 cttttgaaaa attagatgct ctgttaactc caaaacaggc agttgagatt gtgcaaccag
     8881 agaatgattt gaagaccttg gtgggtgatt ttgaacgtga attgggccgc tttttatcgc
     8941 cgtttgaaat cgaagatttg cagaagacta ttgaggatga caaaacttcg attgatttgg
     9001 ttcgtgcagc cttgaaagaa gctgttttta acaacaaaac aaattggaaa tacatccaag
     9061 ctattctacg aaactggcgt cgtgagggaa ttactacagt tgcgcaagta gaagcgaaaa
     9121 atgcagaaag agaaattcag actcctaaga atgtgactgt ttcaagtgac tttcttgatg
     9181 caatggatct ctggaaagat tgatatggaa acaaaattat ctaaaaggct ggaaacagtc
     9241 gcaagttttg tcccacaagg ggcacgtcta gttgatgtag ggagtgacca tgcttatctc
     9301 cctctttttt tggtagagca ggggcgtatt gattttgcca ttgcggggga ggtcgttcaa
     9361 ggtccctatc agtcagcgct ccagaatgta gaacaggcgg gacaaacaga aaaaatccta
     9421 gtccgtttgg caaatggctt aggtgcattt gagaggtctg accagatgac tgccgtgacc
     9481 atagcaggta tggggggacg cttgattgcg gaaatcttag aagcaggtaa agaaaagctt
     9541 gcgactattg aacgtttgat actccagcca aataatcgtg aagatgatgt gcggcgatgg
     9601 ttggaaaaaa atggttttag attggttgct gaaaagattc tggaagaaaa tggcaagtta
     9661 tatgaagtcc tcgttgcaga atcaggacag atgagattgt cagaagttga acatcgtttt
     9721 ggtccctatc tactagagga ggcctcacca gttttcgtca aaaaatggag aagagaactt
     9781 gaaaaattaa gttctgcttt ggaacaagtt ccatctgaac gccaaggtga ccgctttgcc
     9841 atttcccaaa agatccaaca aattcaggag gtagtccatg ttagctagtc aggttattga
     9901 gcgctatcaa gccttttgtc ccccttcttt ggctatggaa ggcgatgtca aagggctgca
     9961 aatcggtacc cttaataaag agattcaacg tgtcatggtg gctctggata ttcgtgagac
    10021 aacagtggca gaggcgattg ataaaaaggt ggatttgatt atcgtcaagc atgctccgat
    10081 tttccgtccg atcaaggatt tggtggcgga caatccgcaa actaaaatgt atcttgattt
    10141 gattaagcat gatattgcag tctatgttag tcatacagat attgatgtgg ttgagggtgg
    10201 tctcaacgac tggttctgtg aactattaga aattcaagat actacctact tgattgaaac
    10261 tgccgagggg caggggcttg gtcgtgtggg gacaatagca gagcagacct tggaggagtt
    10321 ggctttgaaa gtcaaggagg tctttagtct agatgctgtc cgtctagtga cctatgggca
    10381 ccaagccaag cagtatgtca accgtgtggc gatttgtgga ggcagtggtg ggtcttacta
    10441 ccatgaggct cttgccaagg gagcagatgt gtacatcacg ggcgatattt actaccatac
    10501 tgggcaggac atgctgaccc agggcttaca ggctattgat ccaggccatc atatcgaagc
    10561 cttatttatc aagaaaattg ctgaattgtt ggaaatatgg aaggtaaaag aaggttggga
    10621 tgtcgaaatt ctaccttcaa ctgtttcaac caatccattt agacatttgt gataaattaa
    10681 tcagcacttg attgtggaaa gaccaagacg acatttaatg tagttttagg tcttttattt
    10741 tttagatatt ttcttattta tttaagtgaa aaagcttgaa ttttataata aattagggta
    10801 tcttaattca taggatatgc aagattaaac aggataggat gttagttatg acttggttta
    10861 ctaatcagtc tgtagttcta caggctttgc taggtggttt attcacatgg ttttgtacga
    10921 ttgtggggtc tgccgttgta tttttcttta agacagttag tcgtcgtttg ctagatacca
    10981 tgctaggctt tgcagctggt gttatgattg cggcttcttt ttggtcttta ttagccccat
    11041 cgattgagta tgctgaaagt tcatacggca atctggcttg gataccagca gcagtaggtt
    11101 ttgcagcagg tggtattttt ttacgcttgg tagatgcctg ggttccgcat ttgcatttgg
    11161 gaaatgataa agataaggca gaaggtggtg gtgagaagga tagaaaaaat ctatccaaaa
    11221 cagccctgct cttcttagct attacaattc acaatattcc tgaaggcttg gcggtcggtg
    11281 tgacatttgg tgcacttgct tctaactata gtccagcagc ttttatcggc gcaatcggtc
    11341 ttgctattgg gattggtata caaaatattc ctgaaggggc agccttggct attccaattc
    11401 gtacagacgg cgcatctagg tggaaagctt tttactgggg atcaatgtca gcaattgttg
    11461 aaccgattgc agcagtcatc ggggcttttg cggtcacctt tatgacacct attttacctt
    11521 atgccctctc ctttgcggca ggagccatga tttttgtcgt cgtagaagag ctcattccag
    11581 aatcgcagac aaacggcaat acggatattg caactctggg cttaatggct ggttttatca
    11641 tcatgatgat tttggatgtt gccctaggat aatttgttaa agtctgtcgt cacaggcttt
    11701 tttcttatga caatatcttt aaaaatatgg tataatgaac tgatattaat ttagggaagg
    11761 tactcttata tgaaaggtat tattctagct ggtgggtcag gtacacgctt gtatcctttg
    11821 acgcgcgcag cttcaaaaca gttgatgcca atttacgata aaccaatgat ttattatcca
    11881 ttgtcaacac ttatgttggc tgggattaaa gaaattttga ttatctcaac gccacaggat
    11941 cttcctcgtt tcaaggatat gttaggagat ggttctgaac ttggaatctc actttcatat
    12001 gcagaacaac ctagtccaga tggtttggcg caagccttca ttattggtga agagtttatc
    12061 ggtacggata gtgttgccct tattttaggt gataatattt accacggaaa tggtttgacc
    12121 aagatgttgc aacgtgctgc tagcaaagaa aaaggcgcga ctgtcttcgg ttaccaagtc
    12181 aaagatccag aacgctttgg tgttgtggag tttgacgcag acatgaatgc cgtttctatc
    12241 gaagaaaaac cagaggtacc aaaatcaaac tttgcagtta ctggtcttta tttctatgac
    12301 aatgatgttg tggagattgc gaaaaatatc aagccttcac ctcgtggcga gttggaaatc
    12361 acagatgtca acaaggctta cttagaacgt ggcgacttat ctgttgagct tatgggccgt
    12421 ggatttgctt ggttggatac aggtacgcat gaaagtctct tggaagcggc gcagtacatc
    12481 gaaacggttc aacgcttgca aaacgttcaa gtggctaact tggaagaaat tgcctaccgc
    12541 atgggctaca ttacaaaaga acaagtacat gaattggcac agccacttaa gaaaaatgaa
    12601 tacggacaat atttgctccg tttgattgga gaggcctaat gacagaaaac tttttcggta
    12661 aaacactagc cgctcgccca gttgaagcta ttccaggaat gttagaattt gacattcctg
    12721 ttcatggcga caaccgtggc tggttcaagg agaacttcca aaaggaaaaa atgttgcctc
    12781 tcggcttccc tgaaagcttc tttgcagaag ggaaattgca gaataatgtt tctttctccc
    12841 gcaaaaacgt tcttcgtggt cttcacgcag agccttggga taaatacatt tcagtagcag
    12901 acggcggtaa ggttttggga acttgggtgg atctacgtga aggcgaaacc ttcggtaata
    12961 cctaccaaac cgttatcgat gcttcaaaag gtatcttcgt tccgcgcgga gtagccaatg
    13021 gtttccaagt cttgtcagat ttcgtggctt acagttactt ggtcaacgac tactgggctt
    13081 tggagcttaa gcctaagtat gccttcgtca actacgctga cccgagcctt gacatccagt
    13141 gggaaaacct agaagaagca gaagtttcag aagcagatga aaaccaccca tttctcaagg
    13201 acgtcaagcc tttgagaaaa gaggacctct aatgtttcaa gcctttttgg aaatagcaga
    13261 gcagttaaac aagctaggaa ttgttccttt gttactgggc tcagttggtt tagaaaggcg
    13321 aacaggtagg gactggcaag caggagattt agatattcat gttccaagtg atccacgtgg
    13381 ctgggaagcc ccagacgacg aacggattta tcaggcggat gccttgattt ctatgatgaa
    13441 ccaactaggc tatgtcctgg ttgaccgtca tgaacatgaa tttcataaag atggcttatc
    13501 tgttgaattc ggaggcctac attcactgcc tgaatttgct ggtgtagagc tagaagattt
    13561 ggaagaacta gaaacagcag gtgttcgcta ttacctaccg acacttgaac aatacctgaa
    13621 aatctaccaa gcctcttcaa aagactccta ccgtgcagaa aataacaacc aaaaagactt
    13681 tgctaagatt gcttacttga aggaaatctt gaggtaaaaa aagaaaaaaa ttttcggaga
    13741 aaaaaatgtc tcaatttaaa aatattatcg tgactggtgg agctggtttc atcggttcaa
    13801 actttgtaca ctatgtttat aacaatcatc cagacgttca cgtaactgtt ttggataaac
    13861 ttacttatgc aggaaacaag gctaacttgg aagctattct tggtgaccgt gttgagctgg
    13921 ttgttggcga cattgcagat gctgagttgg ttgacaaatt ggcagctaag gcagacgcca
    13981 ttgttcacta tgcggcagaa agccacaacg acaactctct caatgatcca agcccattta
    14041 tccataccaa ctttatcggt acttacactc ttcttgaagc agctcgtaaa tacgacatcc
    14101 gtttccacca tgtatcgact gacgaagtat atggcgacct tcctttacgt gaagatttgc
    14161 caggtcatgg cgaaggtcca ggcgagaaat tcactgcgga aaccaactat aacccatcat
    14221 caccatactc ttcaaccaag gctgcttcag acttgattgt taaagcatgg gtgcgttcgt
    14281 ttggtgtcaa agcaaccatt tcaaactgtt caaacaacta cgggccatac caacacatcg
    14341 agaaatttat cccacgccaa atcaccaata tcttggcagg tattaagcca aaactttacg
    14401 gtgaaggtaa aaacgtccgt gactggattc ataccaacga ccactcgact ggtgtttggg
    14461 caatcttgac aaaaggccgt atgggtgaaa cttacttgat cggtgctgac ggtgagaaga
    14521 acaataaaga agtgcttgaa ttgattcttg caaaaatggg tcaaccaaaa gatgcttatg
    14581 accatgtgac tgaccgtgca ggacacgatt tgcgctatgc tattgacgca agcaaacttc
    14641 gtgatgagct tggctggaca ccgcagttta ccaacttctc tgaaggtttg gaagagacta
    14701 tccagtggta cacagataac caagactggt ggaaggctga aaaagaagct gttgaagcta
    14761 attacgcgaa aacgcaagaa gttattaaat aaaaaaacag aaggctgggg ctttggccca
    14821 agcctttctt gaaacgagga gcaaacatga ttttaattac aggtgcaaat ggtcagttgg
    14881 ggacagaatt gcggtatctc ttggatgagc gtggtgtcga gtacgttgcc gctgacgtag
    14941 cagaaatgga tatcacggat gcagacaagg tagatgcctt ctttgcagag gtcaagccaa
    15001 gcgttatcta ccactgtgca gcctacacag ctgttgatat ggcagaggat gaaggcaagg
    15061 agctcaacta caagattaac gtaacaggct ctgagaatgt tgctaaagcg gcagctaaat
    15121 acggtgcgac ccttgtctat atttcaacgg actatgtctt caatggtgag ttgccagtcg
    15181 gccaagagtg gcaagtagat gatcaaccag atccacaatc tgagtacggc cgtaccaagc
    15241 gtctgggtga agaagcggtt gagaaattcg cagacaagtt ctacacagtt cgcactgcct
    15301 gggtctttgg taactatggc aaaaactttg tctttactat gcaaaatctt gcggaaagcc
    15361 gcgatacctt gaccgttgtt aacgaccaac acggtcgtcc aacctggaca cgtaccttgg
    15421 cagaatttat ggtacacttg gtggaaactg gtcaagaatt tggttactac catttgtcaa
    15481 acgatgcggc agaagataca acttggtttg actttgcgac agagattctc aaagatacca
    15541 acaccaaggt attgccagtg gattctagcc aattcccagc caaagccaaa cgtccattca
    15601 actcaaccat gagcttggac aaggctaagg caacaggctt tgttatccca acctggcaag
    15661 aagctttgga agcattctac aaacaagaga aaaaataact tacatatcga ttttgtgcac
    15721 ggaaatatta aaatggaagc tcttaaatta attaagggct ttttcattta gatgaatg
//
LOCUS       DASFQS010000054        15680 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.055, whole genome shotgun sequence.
ACCESSION   DASFQS010000054 DASFQS010000000
VERSION     DASFQS010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15680
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.055"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..4299
                     /locus_tag="U1041_001402"
     CDS             <1..4299
                     /locus_tag="U1041_001402"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017180.1,HMM:NF019216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768511.1"
                     /translation="VQPEEPTDPVVPSSPVTEQPEEPETPVPPSTESEVLPEEPTAPV
                     VPSSPVTEEPEEPIKTKPELVLSILKENVDDKSVELSYTLTDSDSTFVKVLVSLYKGD
                     ELVTEKEILTQEELYKVQFANLLLNTEYKVKTRFAYNLGSDDVEEELGTEKFELENKL
                     LELREYKSIELYQVDEFGEKTRVTALTSTPISSENYLVKISTVNNKDIYLPVDNFEND
                     VNGIKVSIIHPKLVKFNQNNSSFDEHYTFTVDKLVLQEGAYSKFSELVDAINNNPSGT
                     YYLAADMVVDKEVSTDTYVTKEFTGSLKSLGDHRTYSILQLDKPLFSTLKNARVENIS
                     LKDVSIKNDQTAVAALAKKSDKSTIDKVSVSGNITAKQNIAGLVYEATNGTSISNSIV
                     NVNLSNTASHETYHIGGVTGILNSSTIDKVRATVAIDAKTASGRGQKIGGVTAEMIVS
                     IQQPIMTNVYVTGKIEASAPADTGGVVGLARMSFLNNIATGVSVTNGGIIASAQNAYA
                     TVLSTISNLYSVEGHAAGQPNPTIQSTSLSQEAVLEKIKAWGIPTTPTTTGQENSDSQ
                     SNSVQTIDYNQVQNAQAKRRTAYENTSKLLPFYDRNTIVKYGNLIDEASNLYSKPIQS
                     VLTLNEDGVATNIYDQHASLTKLLIHYEDGTSEVLPLVFKGEYGNTKVVEYRLGEQLL
                     YTPEQLLSLETSLIDELVTAFSQVNLYSQEMADILHIKTADKHAKLKDLYLDESFAEV
                     KANLEVHIKGLLANRQVVDTTSKAVRDVIKKEFLADKEKIMFALAYLNRLYGIKYGDT
                     NIKNIVLHHADFYKRQLDTLGWLRSFTDKLTKHDDQFYVSQKGYEDMYFDRLTLANNA
                     AIHKERFGALSSQFGTVRDFLEYNKKLFLGETDSRKWFKEATNAFVYEIPSNANSSID
                     TSLYSHLGRIPRYEKYYLPLLNIKEKDDIFVMSSMATVAFGGYGRYVDTALKKTNPEQ
                     YYQAVKTVQTSLIPKHGKRLGDFLDMWYQMADSHLRDKFIQRSTEIWDGYWIKDSNAF
                     EDQTDKRRWADKYDQEYRYVQELAGALNEWHRQSRDSAFSDTVTFVKFSNRDMLSDLG
                     DSTMSHELVHNYDETIMLDGYKRRPGQDAESYAMGLLQSSAGGGIYYYGFNFMNEHSP
                     NTPHNVSSSRFKTKEDLQTYLKGIFDVTYLLDAVEIEAIAAKGKEAYPYFFNKIELVP
                     ATEAHTNQIPGYQNTHDRIRKLSDVELANLNISTINDAIDHALVAKTSLLPEQDYLRE
                     NLKNYYFVPLYYPIYAGLQNNSGTVGGLQFRKTALELLAAKGWEEGFIPYATDKLKAE
                     AEAAGRPLSDQFIFEKIFANQYADYTSFKKAMYKERLDKKNSMKAISFIYNGRTETIE
                     NYDTLKLLMQDAVNKDYQAAQNGQIGFNRQGLKDAILKAYVKLTDSFSSSIFGE"
     gene            4430..4804
                     /locus_tag="U1041_001403"
     CDS             4430..4804
                     /locus_tag="U1041_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002305392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1149 family protein"
                     /protein_id="HEM4768512.1"
                     /translation="MEIIRDKEFVNQYHFDARNHAWEKENGIPETKLKVDFQLIEQNR
                     AENRTSMITILRFMIVLDHFVISGAMSQAVHLPNRLVEEPTEFTDEEKRVLVEPLLDI
                     LKRMTYEVTEIAFDAPGVNLEF"
     gene            4806..5657
                     /locus_tag="U1041_001404"
     CDS             4806..5657
                     /locus_tag="U1041_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4768513.1"
                     /translation="MKLAVITDSSAVLNVQSIERDDLFVLSIPVSIDGENYIEGQNLT
                     VEEFYQKMASSKELPKTSQPSLMELEEILRGLKDKGYTHALGLFLSSGISGFYQNIQY
                     LADEFEGLTIAFPDTKITSAPLGMMVENVLKWADSGLSFEEITGKLDQEIGKTTAFIM
                     VDDLNHLVKGGRLSNGAALLGNLLSIKPILYFTDEGKIEVYEKVRTEKKAIKRLIEIL
                     QEQTTEGQYQIAIIHANAPQKAENFKQQLEEAGVGSDLPIVSFGSVIGTHLGEGAVAF
                     GISPIIE"
     gene            5666..6433
                     /locus_tag="U1041_001405"
     CDS             5666..6433
                     /locus_tag="U1041_001405"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002262893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEM4768514.1"
                     /translation="MTIKVIIAGFKGKMGSTAVEMVKGDAALSLAALVDPFATETEVD
                     GVPVFKTKEEVASLEADVWVDFTTPKFAYENTRFALENGFAPVVGTTGFTPEEIEELT
                     ALSAEKGLGGLIAPNFAIGAILLMQFAAQAAKYFPNLEIIELHHDKKKDAPSGTAVKT
                     AELISQVRQSQVQGAADEEELIAGARGAEFDGFRIHSVRLPGLVAHQEVIFGAQGEGL
                     TIRHDSYDRISFMGGVNLGIKEVVKRSQLVYGLEHLL"
     gene            6430..7641
                     /locus_tag="U1041_001406"
     CDS             6430..7641
                     /locus_tag="U1041_001406"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEM4768515.1"
                     /translation="MKLNNLPSEFQEALPILEKIKAAGYEAYFVGGSVRDAILGRPIH
                     DVDIATSSYPQETKQIFPRTIDVGIEHGTVLVLEGGKEYEITTFRTEEEYVDFRRPSQ
                     VSFVRSLEEDLKRRDFTVNAFALDEEARIVDLFNGLTDLENRTLRAVGIPAERFNEDA
                     LRIMRGFRFAATLDFEIEPMTFEAMVETAPLLEKISVERSFIEFDKLLMADFWRKGLR
                     AMIDSKAYNFLPDLADKGEKLESMLTSLAEDFRFSTSEQAWALLFVCLGIDNIKSFLK
                     KWKTSNDFQRSVVKLVEIYQLRQAGPVTKQICFKYGKEFLYLVEELRQAQGLVTDFAA
                     IDKIDQALSIHDKHEIVVNGGHLMKAFDLKPGPVLGNLLKEVEFQIVEGQLENEEQAI
                     MTFVKGILEDE"
     gene            7634..9502
                     /locus_tag="U1041_001407"
     CDS             7634..9502
                     /locus_tag="U1041_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4768516.1"
                     /translation="MSDFIVEHLTKSVGDKTVFADLSFIIHQGDRIGIIGVNGTGKTT
                     LLDVLSGRIGFDGDVSPFRTKNAYKIAYLTQEPDFDESKTVLDTVLSSDLRETQLIRE
                     YELLLSHYDETSQARLEKVMAEMDSLNAWEIESQVKTVLSKLGLTDLNKTVAELSGGL
                     RRRVQLAQVLLGNADLLLLDEPTNHLDIDTIEWLTTFLKNTKKSVLFITHDRYFLDNV
                     ATRIFELDRASLTEYQGNYQDYVRLKAEQDERDAALRHKKEQLYKQELAWMRRQPQAR
                     ATKQQARINRFHDLKGDLANKIDDSELEINFETSRIGKKVINFENVSFSYPDKPILKD
                     FNLLIQNKDRIGIVGDNGRGKSTLLNLIAGDLQADSGRVDIGETIRIGYFSQTIKGLD
                     ESKRVINFLQEVAEEAKTTSGMVSIAELLEQFLFPRNTHGTLIEKLSGGEKKRLYLLK
                     ILLQRPNVLLLDEPTNDLDIATLTVLEHFLQGFTGPVITVSHDRYFLDKVATKILAFE
                     DSGIQTFFGNYTDYLDEKAFLASSSAISLEKPKEKTEKIKENKKRMSYFEKQEWATIE
                     EDIAGLEERIAAIEAEMLTCGSDFTKLSDLQKELDEKNDLLLEKYERYEYLSELEG"
     gene            9503..9838
                     /locus_tag="U1041_001408"
     CDS             9503..9838
                     /locus_tag="U1041_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768517.1"
                     /translation="MKVLVMSYMVIYLLVTLGAALFSYLKTKKMNTLRLLLTVLSMLL
                     LAVTLYFYSQAYHDVQMVGFALGFTFISTLFLYNGTKEGSNFTTVMLFSVGRFILHIQ
                     FLILLYLFR"
     gene            9932..10891
                     /locus_tag="U1041_001409"
     CDS             9932..10891
                     /locus_tag="U1041_001409"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HEM4768518.1"
                     /translation="MSKKIIGIDLGGTSVKLAILTTEGEIQEKWSIKTNILDDGSHIV
                     PDIIDSIKQRFETHGLTKDDFLGVGMGSPGVVDSEAGTVIGAYNLNWKTLQLVKEQFE
                     SALGLPFFIDNDANVAALGEQWVGAGNNNPNVVFMTLGTGVGGGVIAAGNLIRGVKGA
                     GGELGHITVDFDEPFACTCGKKGCLETVASATGIVNLSRRYADQYAGDAKLKQMIDDG
                     QDVTAKDVFDLAKEGDDLALIVYRHFSEYLGVACANIAAVLNPAYIVLGGGVSAAGEF
                     LLDGVRKVFAENSFPQIKESTQIVLATRGNDAGVLGAASLVLK"
     gene            11017..11295
                     /locus_tag="U1041_001410"
     CDS             11017..11295
                     /locus_tag="U1041_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768519.1"
                     /translation="MKQVNMSKIINYLTILGLLILLSAFFLDYWIRDWFFPSSWGNVA
                     TMLILPILGTLILILSIYYKKLWTGLISIFLMISFPLIFGIGYFIFGP"
     gene            11307..11609
                     /locus_tag="U1041_001411"
     CDS             11307..11609
                     /locus_tag="U1041_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768520.1"
                     /translation="MNLTLLKRLNLVLYGIAIFLIVMLFLPIGQWFDIVNVNFKLTFF
                     IIPFFGLASLPTAIYTKNVRQILLSVILVALYFILFSLITALSGLFHLDFYSFFFK"
     gene            11662..12501
                     /locus_tag="U1041_001412"
     CDS             11662..12501
                     /locus_tag="U1041_001412"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015632084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEM4768521.1"
                     /translation="MTKADIIFKENIRKIMEDGVFSENARPRYKDGNVANSKYITGAF
                     AEYDLAKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQKKYGVQYWNDWEVDGT
                     GTIGERYGAIVKKHDIISKILKQLEENPWNRRNVISLWDYEAFDQSAGLLPCAFQTMF
                     DVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNL
                     HIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFD
                     LAI"
     gene            12677..13189
                     /locus_tag="U1041_001413"
     CDS             12677..13189
                     /locus_tag="U1041_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEM4768522.1"
                     /translation="MTKKIVAIWAQDENGLIGKGDKLPWSLPADWAHFKETTTGHTMV
                     MGRVTFDGMGKRALPNRHSLVLTSDETYQVENDRVTVLHNVEAVLDWYHQQEGTLFVL
                     GGGQIFTAFAPYIETLIVTDIHGQFNGDVYFPKAFPMEKFQLQSANLRPKDEKNPYDF
                     TIKTYERRDG"
     gene            13192..13365
                     /locus_tag="U1041_001414"
     CDS             13192..13365
                     /locus_tag="U1041_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768523.1"
                     /translation="MERSLFGLFTAFLCGICVLCAIQAFRKKRFGLAILFLLNAFTNL
                     VNSIHAIYGFLFR"
     gene            13387..14613
                     /gene="clpX"
                     /locus_tag="U1041_001415"
     CDS             13387..14613
                     /gene="clpX"
                     /locus_tag="U1041_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEM4768524.1"
                     /translation="MAVKHTHEFIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEI
                     IREELAEEVLTDLADTPKPQELLNILNNYVIGQDRAKRALAVAVYNHYKRINFQDSRD
                     ESDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
                     LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVA
                     SVPPQGGRKHPNQEMIHVDTKNILFIVGGAFDGIEEIVKQRLGEKIIGFGHNNRAIDE
                     KESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTTEDLVRILTEPKNALVKQYQTL
                     LSYDDVELDFDEDALLAIAEKAIERKTGARGLRSIIEETMLDVMFEVPGQDNVKRVRV
                     TKAAVDGKEKPLLETA"
     gene            14668..15255
                     /locus_tag="U1041_001416"
     CDS             14668..15255
                     /locus_tag="U1041_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002915299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEM4768525.1"
                     /translation="MEINTHNAEILLSAVSKAQYPGDDIPEIALAGRSNVGKSSFINT
                     LLGRKNLARTSGKPGKTQQLNFYNIDDKIRFVDVPGYGYAKVSKTERAKWGKMIEEYL
                     TTRENLRVVVSLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESM
                     IKKKLDFDKNDQFVIFSSETRHGYDQAWDAILSNI"
     gene            15278..15680
                     /gene="ndk"
                     /locus_tag="U1041_001417"
                     /pseudo
     CDS             15278..15680
                     /gene="ndk"
                     /locus_tag="U1041_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934976.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
BASE COUNT         4773 a         2913 c         3488 g         4506 t
ORIGIN      
        1 gttcaacccg aggaaccaac agatcctgta gtcccaagct ctccagttac tgaacaacca
       61 gaagaaccgg aaactcccgt tccaccatca acagaatccg aagttctacc cgaggaacca
      121 acagcgccag ttgtcccaag ttctccagtt acggaagaac cagaagaacc tattaaaacc
      181 aaaccggagt tagttttatc aattcttaaa gaaaatgtag atgataagag tgtagaacta
      241 agctatacac tgacagatag tgattccaca tttgtcaagg ttttggtatc tctatacaaa
      301 ggggatgaat tagtcacaga aaaagaaatt ctaacacaag aagagctata caaggttcaa
      361 tttgctaact tactactgaa cactgaatat aaagttaaaa cacgatttgc ctataattta
      421 ggtagtgatg atgtggaaga agagctcgga acagaaaaat ttgaactaga aaataaatta
      481 ctggaattac gagaatacaa gagtattgag ctatatcagg tggatgaatt tggcgagaaa
      541 acaagggtca cagccttgac tagcactcca atttcttcag aaaactacct tgttaagatt
      601 tctactgtaa acaataaaga tatttacctc cccgtcgata acttcgagaa tgatgtcaat
      661 ggcattaagg tgagcattat tcatccaaaa ttagtaaaat ttaatcagaa caattctagt
      721 tttgatgaac actatacctt tacagttgac aagcttgtct tacaagaggg ggcctacagt
      781 aaatttagtg aattagtaga tgccatcaat aacaatccta gtggaactta ttatctagct
      841 gctgatatgg ttgttgataa ggaggtttcg accgacacct acgttaccaa agaatttact
      901 ggaagtctga agagtctagg tgaccatagg acttattcta ttttgcagtt ggataaaccg
      961 cttttcagca ctcttaaaaa tgctagggtt gaaaatatct ccttgaaaga tgtgagcatt
     1021 aaaaatgatc aaacagcagt agcagctcta gctaagaaat cagacaagtc taccatcgat
     1081 aaagtttctg tttcagggaa tattacggcc aaacaaaata ttgctggttt ggtttacgaa
     1141 gcaacaaatg gtacaagcat tagtaattcc attgttaatg tgaacctaag caacacagca
     1201 agtcatgaaa cgtatcatat tggtggtgtt acagggattt taaatagttc aaccattgat
     1261 aaggtgcgag ctactgttgc gattgatgct aaaactgcaa gtggccgcgg acaaaaaatt
     1321 ggtggtgtta cagcagagat gattgtgtca atccagcaac cgatcatgac aaatgtctat
     1381 gttacaggaa aaatagaagc tagtgcccca gctgatacag gtggtgtggt tggcttagct
     1441 agaatgtctt tcttgaataa tattgcaaca ggtgtatctg ttacaaatgg aggtatcatc
     1501 gcttcggctc aaaatgccta tgcaacagta ttgtccacca taagcaatct ttatagtgtt
     1561 gaaggtcatg cagcaggcca accaaatcct accattcagt ctacaagcct ttctcaagaa
     1621 gccgtgctag agaaaatcaa ggcatgggga attccaacaa caccaaccac aacaggacag
     1681 gaaaatagcg acagtcagtc gaattcagtg cagaccattg attataacca ggttcaaaat
     1741 gctcaggcta aacgaagaac tgcctatgaa aacacgtcta agttgttgcc attctatgac
     1801 cggaatacga ttgttaaata tggtaacttg attgatgaag caagtaatct ctatagcaag
     1861 cctatccagt cagttctgac cttgaatgag gatggagtag caacaaatat ctatgaccaa
     1921 cacgcttcct tgaccaaatt actgatccat tatgaagatg gaacttcaga agttctgcct
     1981 ttggtattta agggagagta cggcaatacc aaggttgttg aataccgctt aggtgaacaa
     2041 cttctctata cgccagaaca attactatct ctggaaacaa gtctaatcga tgaactagtg
     2101 acagcatttt ctcaggttaa tctttacagc caagagatgg ctgacatctt acatatcaaa
     2161 actgcagaca agcacgccaa actaaaagac ttgtatttag atgaatcctt tgcagaagtc
     2221 aaagccaatc tcgaagtcca tatcaaaggt ttgctggcca atagacaggt agttgatacc
     2281 acaagcaagg ctgtcaggga tgtcattaaa aaagaattct tggcagataa agaaaaaatt
     2341 atgttcgccc ttgcctacct caataggcta tatggcatta aatatggaga taccaatatc
     2401 aagaatattg tgctccatca tgcggatttc tataagcgtc aattagatac tttaggctgg
     2461 ttgaggtcat ttacggataa actcaccaag catgatgatc agttctatgt ttcgcaaaaa
     2521 ggctacgaag atatgtattt tgacagatta acacttgcca ataatgcagc cattcataag
     2581 gaacgttttg gagcactctc tagtcaattt ggaacagttc gtgatttctt ggaatacaat
     2641 aagaaattgt tcttgggaga aactgattca aggaagtggt ttaaagaagc gaccaatgcc
     2701 tttgtttatg aaattccatc caatgcaaac tcgagcattg acaccagtct atatagtcat
     2761 ctgggacgta ttccacgcta tgaaaaatac tatttgccat tgctgaatat caaggagaag
     2821 gatgatattt tcgtaatgag ctcaatggca acagtagcct ttggtggtta tggaagatat
     2881 gtggatacgg ctttgaaaaa gaccaatcct gaacaatatt accaagcagt taagacagta
     2941 cagacaagtc tgataccgaa acacggaaaa cgattaggtg actttttgga tatgtggtat
     3001 cagatggcag attctcatct aagagacaag tttatccaac gctcaactga aatttgggat
     3061 ggttactgga tcaaggattc aaatgcattt gaagaccaaa ctgataaacg tcgttgggca
     3121 gataagtatg accaggaata ccgctatgtt caggagttgg caggtgcctt gaatgaatgg
     3181 catagacaat caagagatag tgccttttca gacacagtaa cctttgtaaa attctcaaat
     3241 cgggacatgc tatcggattt aggtgattcg accatgagcc atgaattggt ccataactat
     3301 gatgaaacta tcatgttgga tggttataag cgtcgtcctg gtcaagatgc agaatcctat
     3361 gctatgggct tgttgcagtc atcagctggt ggaggtattt attactatgg atttaatttc
     3421 atgaatgaac atagtccaaa taccccacac aatgtttcaa gtagtcgctt caaaacaaaa
     3481 gaggatttgc aaacctatct aaaaggaatc tttgatgtta cctacctctt ggatgcggtt
     3541 gaaatcgaag cgattgctgc taaggggaaa gaggcttatc cttacttctt taacaaaata
     3601 gagttggtcc cagccactga agcacacacc aatcagattc ctggctatca aaatactcat
     3661 gatcgcatta ggaaattaag tgacgtggaa ctagctaatt taaatattag tacaatcaat
     3721 gatgccattg atcatgccct agttgccaaa acatcactgt taccagaaca agactatcta
     3781 cgtgaaaatt tgaagaacta ttatttcgta ccgctttatt atccgattta tgcaggcttg
     3841 caaaataata gtggtactgt cggtggttta caattccgta agacagcctt ggaacttctt
     3901 gctgcaaaag gttgggaaga aggctttatt ccttatgcaa cagacaagct aaaagcggaa
     3961 gcagaggcgg caggtcgtcc attatccgat cagtttattt ttgaaaaaat atttgctaat
     4021 caatatgcgg attatacaag cttcaaaaaa gctatgtata aagaacgcct agataagaaa
     4081 aatagtatga aggctatcag ttttatctac aatggtcgga ctgaaacaat cgagaattac
     4141 gatactctta agctcctgat gcaggatgca gttaataaag attaccaggc agctcagaat
     4201 ggtcaaatag gatttaatcg tcaaggtttg aaagatgcta ttttgaaagc ctatgtcaag
     4261 ctaacagata gtttcagttc ctctatattt ggagaatgat ggaagtctgc tctatataca
     4321 aatgggaaga aattgaaaga taatattttc ggtttcttcc ttttattttt taaatcttca
     4381 atacattatg gtataatatg cataatattg tttataggag aagttagaaa tggaaatcat
     4441 tcgcgataaa gaatttgtca atcagtatca ttttgatgcc cgcaatcatg cgtgggaaaa
     4501 agagaacgga attccggaaa caaaattgaa agttgacttt caattgattg agcaaaatcg
     4561 tgcggaaaat cgaacatcta tgattaccat tttgcgcttt atgattgtac tagatcattt
     4621 tgtgatttca ggtgccatga gtcaggccgt tcacttacca aatcgattgg tagaagaacc
     4681 aactgaattt actgatgagg aaaaacgtgt tttggtagag cctcttttgg acattttaaa
     4741 acgaatgact tatgaggtta ctgaaatcgc ctttgatgca ccaggagtga atttggagtt
     4801 ttaatatgaa attagcagtt ataactgact catcggctgt tttgaacgtt caaagtattg
     4861 agcgggatga cctgtttgtc ctaagtattc cagtcagcat cgatggggaa aattatatcg
     4921 aagggcaaaa tttgacggtt gaagagtttt atcaaaaaat ggcttcatcg aaagaattac
     4981 ctaaaacaag tcaaccgagt ttgatggaat tggaagaaat tcttagaggc ttgaaagata
     5041 aaggctatac acacgcactt ggcttattct tgtcatcagg tatttcaggt ttttatcaaa
     5101 atattcaata tttggctgat gaatttgaag gattaaccat tgcctttcca gataccaaaa
     5161 tcacatcggc tcctttaggc atgatggtag aaaatgttct caaatgggct gactctggac
     5221 ttagttttga agaaattact gggaaattgg accaagaaat tgggaagaca acagccttta
     5281 tcatggtcga tgacctcaat cacttggtaa aaggtggtcg cttgtccaat ggtgcagcct
     5341 tgttaggcaa tctcttgagt atcaagccga ttctatactt tacagatgaa ggtaagattg
     5401 aagtttatga aaaagttcgg acagagaaga aggctattaa acggttaatc gaaattctcc
     5461 aagaacaaac aacagaaggg cagtatcaga ttgctatcat acacgccaac gcacctcaga
     5521 aggctgaaaa ctttaaacag cagttggaag aagcaggtgt cggtagcgat ttaccaattg
     5581 tatcatttgg ttcggtcatc ggtacgcact tgggagaagg ggcagtggcc tttggtattt
     5641 ctcccattat tgaataggag tttgcatgac aattaaggta attatcgcag gatttaaagg
     5701 gaaaatgggc tcaacggctg ttgagatggt caaaggcgac gcagcactta gtctggctgc
     5761 cttggtcgat ccttttgcga cagaaacaga agtagatggt gttcctgttt tcaagaccaa
     5821 agaagaagtt gccagcctag aagctgatgt ctgggtggat tttacaacgc caaaatttgc
     5881 ttatgaaaac actcgctttg ccttggagaa cggctttgca cctgtggttg gaacgacggg
     5941 ctttacccca gaagaaattg aagaattaac cgccttgtct gctgagaaag gcttgggtgg
     6001 cttgattgct cctaactttg ctattggcgc tatcttgctc atgcaatttg cagctcaggc
     6061 agccaagtat ttcccaaatc ttgaaatcat tgaattacac cacgataaga agaaggatgc
     6121 accgagtggt acggctgtca aaacagctga actcatttcc caagtccgtc agtcccaagt
     6181 tcaaggtgca gcggatgaag aagaactgat tgctggtgct cgcggtgcag aatttgacgg
     6241 attccgtatc cactcagtac gcttgccagg ccttgttgcc caccaggaag tgatttttgg
     6301 ggcacagggc gaaggcttga ccattcgtca tgactcttac gatcgtattt cctttatggg
     6361 cggtgtcaat ctcggtatta aagaggtagt caaacgctca caactcgttt atggtttgga
     6421 acacttatta tgaaattaaa caatctgcct tctgagtttc aggaggcttt gccgatttta
     6481 gagaaaatta aagcagctgg ttacgaggct tacttcgttg gcggttccgt gcgggatgcc
     6541 attttgggca gacctattca tgatgtcgat attgccacgt ccagctatcc gcaagaaact
     6601 aagcaaatct ttccgcggac tattgatgtg gggattgagc acgggactgt cttggtcttg
     6661 gaaggtggca aagagtatga aatcacgact tttcggacag aggaggagta tgtcgacttc
     6721 cgtaggccga gccaggtttc ttttgtgcgt tccttggaag aggatctcaa acgccgagac
     6781 ttcacggtca acgcttttgc ccttgatgaa gaagcccgaa tcgttgatct ttttaacggg
     6841 ttaactgatt tggaaaaccg cactctacgg gctgtaggca tcccggctga gcgcttcaat
     6901 gaagacgccc ttcgtatcat gagaggtttt cgctttgcag cgaccttgga ctttgagatt
     6961 gagccgatga cctttgaagc catggttgaa accgcaccgc ttttggaaaa aatctctgtg
     7021 gaacgtagtt ttatcgagtt tgataaactc ttgatggcgg atttttggcg aaaaggcttg
     7081 cgtgctatga ttgattccaa ggcttacaat ttcttgcctg acctagcaga caagggagaa
     7141 aagcttgaaa gcatgctgac cagtctggca gaagatttcc gattttcaac ttccgaacag
     7201 gcttgggctc tgctctttgt ctgcctaggt attgataaca tcaaatcctt cctgaaaaaa
     7261 tggaaaacca gtaacgattt ccaacgcagc gtggtcaagt tggtagagat ttatcagctt
     7321 cgccaagcag gacctgttac caagcaaatc tgtttcaagt acggcaaaga attcttgtac
     7381 ttggtagagg aactccgtca ggcacaaggt cttgtcacag attttgcagc aatcgacaag
     7441 attgaccaag ctctgagcat ccacgataag catgaaattg ttgtcaatgg aggacatctg
     7501 atgaaggcat ttgacctcaa accaggtcca gtattgggca atttgctcaa agaggtggaa
     7561 ttccagattg tggaaggaca gctagaaaac gaagagcaag ccattatgac atttgtgaaa
     7621 ggaatcttag aggatgagtg attttatcgt tgaacacctg actaaatctg tcggagataa
     7681 aacggtcttt gctgatctgt ctttcatcat ccatcaaggc gaccgtatcg ggattatcgg
     7741 ggtcaatggt acaggaaaga cgactttgtt ggatgttctg tcaggtcgta tcggttttga
     7801 cggagatgta tcaccttttc gtacaaaaaa tgcctataaa attgcctatc tgacacagga
     7861 acctgatttt gatgaaagta agacagtttt agacaccgtc ctttcttctg acctccgtga
     7921 aacccagctg attcgtgaat acgagctact cttatctcat tacgatgaaa ccagtcaagc
     7981 aagactggag aaagtcatgg cagagatgga ttctctcaat gcttgggaga ttgaaagtca
     8041 ggtcaagact gtcttgtcga aactcgggct aacagacctc aacaaaaccg ttgctgagtt
     8101 atcaggtggt ctacgtagac gagtgcaatt ggcccaagtc ctccttggca atgctgactt
     8161 gctcttgctg gatgaaccga ccaaccactt ggacattgat accattgagt ggttgacgac
     8221 tttcttgaaa aatactaaaa agtctgttct ctttattacc cacgatcgct atttcttgga
     8281 caatgtggcg acacggattt ttgaattgga ccgcgccagc ttaaccgaat atcagggaaa
     8341 ttaccaggac tatgttcgct tgaaggcaga acaggacgag cgagatgccg cccttcgcca
     8401 taagaaagag caactctaca aacaagagct ggcttggatg cgcagacaac ctcaagctcg
     8461 tgcaaccaag caacaggctc gtatcaatcg tttccatgac ctcaaaggcg atttagccaa
     8521 caagatagac gatagcgaac tggaaatcaa ttttgaaacc tctcgtatcg gcaaaaaagt
     8581 cattaacttt gaaaatgtca gcttttccta tcctgacaag cctattttaa aagactttaa
     8641 cctgctcatt caaaacaagg accgcatcgg tattgttggt gataatggta gaggaaaatc
     8701 taccctgctc aatctaatcg caggtgattt acaggcagac agcggtaggg tagatattgg
     8761 cgaaaccatc cgtatcggct acttctcgca aacaatcaaa ggactagatg aaagcaagcg
     8821 ggtcatcaat ttcttgcagg aagtagcaga agaagctaag acgacatctg gtatggtttc
     8881 tatcgcagaa ctcttggagc aattcctctt cccacgcaat acccacggta ccttgattga
     8941 aaagttgtct ggcggggaga agaagcgact ttatttgctg aagattctct tgcaacggcc
     9001 caatgttctc ttactagatg agccgaccaa cgacttggac atagcgactc tgacagtctt
     9061 ggaacatttc ttgcagggct ttactggtcc agtcattacc gttagtcacg accgttattt
     9121 cttggacaag gttgcgacca aaatcctcgc tttcgaagat agcggcattc agaccttctt
     9181 tggcaactac acagactatc tggatgagaa ggcctttctg gcttccagct ctgccatttc
     9241 cttggaaaaa ccaaaggaga aaaccgagaa aatcaaagag aacaagaagc ggatgtccta
     9301 ttttgagaag caggagtggg caaccatcga agaggatatt gctggcttgg aggagcggat
     9361 tgcggcaatc gaggcggaaa tgctgacctg tggtagtgat tttacaaaat tgtccgattt
     9421 gcagaaggaa ttggatgaga aaaacgacct gctcttggaa aaatatgagc ggtatgagta
     9481 tctgagcgag ttggagggct agatgaaagt tcttgtcatg tcttatatgg tcatctatct
     9541 tttggtgacc ttgggagcgg ctttgtttag ctatctaaag accaaaaaaa tgaatacatt
     9601 gcgcttgtta ttaacggtct tatccatgct cttgctagct gttacactct atttttacag
     9661 tcaggcctat cacgatgtac aaatggtggg atttgctcta ggatttacct ttatttctac
     9721 tctttttctc tataatggaa cgaaagaggg tagtaatttt actacggtca tgctattttc
     9781 cgtgggacgc tttattttgc atattcaatt tttaattttg ctctatctat ttcgttaggg
     9841 caaatttttt atccgttcaa ttttttgaaa aggctttacg caaacctttg cattgtgtta
     9901 taataaagaa aatacatttg aggtgatgat tatgtctaaa aaaattattg gtattgacct
     9961 tgggggaact tctgttaaat tggccatctt gactactgag ggagaaattc aagaaaaatg
    10021 gtctatcaag acaaatatat tagacgatgg aagtcatatt gttcctgata ttattgacag
    10081 tatcaagcag cgatttgaaa cccatggttt gacaaaagat gactttttgg gtgttggtat
    10141 ggggtctcct ggtgtcgttg atagcgaagc tggtacggtt atcggtgcct ataacctcaa
    10201 ttggaaaacc ttgcaattgg tcaaagaaca gtttgaatct gcccttggtt taccattctt
    10261 tatcgacaat gatgcaaacg tagcggccct cggtgagcag tgggttggtg ctggaaacaa
    10321 caatccaaac gttgtcttta tgacgcttgg tacaggtgtc ggtggcggtg tcatcgctgc
    10381 tggaaacttg attcgtggtg tcaaaggtgc tggtggtgaa ttgggccata tcacagttga
    10441 ctttgatgag ccatttgcat gtacttgtgg taagaaaggt tgtctagaaa cagttgcttc
    10501 cgcgacaggt attgtcaacc ttagccgtcg ttatgcggac caatacgcag gcgatgcaaa
    10561 actgaaacaa atgatcgatg atgggcaaga tgtaacggct aaagatgtct ttgacttggc
    10621 aaaagaaggc gatgatttgg ccttgattgt ctaccgtcac ttctctgagt atttaggtgt
    10681 ggcatgtgct aacattgctg cagtcctcaa tcctgcctac atcgttcttg gtggcggtgt
    10741 atcagctgca ggagagttct tattggatgg cgttcgcaag gtctttgcag aaaatagctt
    10801 cccacaaatc aaggaaagta cacaaattgt cttggcaaca cgtggtaatg atgcaggtgt
    10861 attgggcgca gcatcactcg tcttgaaata atcgttaaaa gcagggaaac tctgcttttt
    10921 ttcaattccg ctgtcacatt ttctttatat acatatattg aaaaatgtag tatttaagcg
    10981 tacaatgaaa gtgtaaagag aaaggagtgt caccttatga aacaggtaaa catgtctaaa
    11041 ataatcaact atctgaccat tcttggttta ttgattttgt tatcggcttt tttccttgat
    11101 tactggattc gtgactggtt tttcccgtct agctggggaa acgtagcaac catgttgatt
    11161 cttcctatac tggggacttt aattcttata ctatctattt attataaaaa attgtggact
    11221 ggtttgatta gtatcttctt gatgatctca tttcctttga tatttggcat tggctacttt
    11281 atatttggcc cctagaagga gtggttatga acctgacttt actaaaaaga ttaaatctag
    11341 ttttgtatgg tatcgcaatt tttctcatcg tcatgctatt tttgccaata gggcaatggt
    11401 ttgatattgt aaatgtgaat tttaaactaa catttttcat cattccattt ttcggactag
    11461 ccagcttacc aacggctatt tatactaaaa atgttcgtca gatattgctg agtgttatct
    11521 tggttgcttt gtattttata ctgttcagct taataactgc cctatctggt ttgttccacc
    11581 ttgattttta ttcattcttt ttcaaatgag aactccggtg caaaactgga gttttttgct
    11641 ggaatttgct atactatgac catgactaaa gcagatatta tttttaaaga aaatattcgt
    11701 aagattatgg aagatggcgt tttttcagaa aatgctcgcc cacgttacaa ggatggaaat
    11761 gtcgctaatt ccaagtatat tactggtgcc tttgcggagt atgatttggc caagggggag
    11821 tttcctatta ccacactaag acctatcccg attaaatcag ccattaaaga aattctctgg
    11881 atttaccaag accagaccaa tgacctatct gtcttgcaga aaaaatatgg cgttcaatat
    11941 tggaatgact gggaagtaga tggaacaggc acaatcggtg agcgttacgg tgctattgtg
    12001 aaaaaacatg acatcatttc aaaaatcctc aagcaattgg aggaaaatcc atggaaccgc
    12061 cgtaatgtga tttctttgtg ggattatgag gcttttgacc agtcagcggg tcttttgcca
    12121 tgtgcctttc agaccatgtt tgacgttcgg cgagtggatg gggagattta tctggatgca
    12181 actctaactc aacggtcaaa tgatatgttg gtagcccatc atatcaacgc tatgcagtat
    12241 gtagcccttc agatgatgat tgctaaacat tttggctgga aggttgggaa gtttttctat
    12301 ttcatcaaca atcttcacat ctatgacaat cagtttgaac aagctgaaga attactccgt
    12361 cgtacaccat ctgaagtaga gcctcgtttg gtcttaaatg ttcctgacgg taccaatttc
    12421 tttgatattc gggcagaaga ttttgagttg gtggactaca atccagttaa accgcaactt
    12481 aaatttgact tggcgattta agatgagggg ggctttccag caccagcgag attcacattc
    12541 tacgaatatc ggaatcttcc ctatctctga ggagtcggtg atagtttcag catgataaaa
    12601 atttgcgctt ggcctacttg gtaagtgcat ttttcatgtt tttttgatag aatgatagga
    12661 cggaaagtga gggaaaatga caaaaaagat tgttgccatt tgggctcaag atgaaaatgg
    12721 attgattgga aaaggcgata aattgccctg gtctttgcct gctgactggg ctcattttaa
    12781 agaaacgacc actggtcata ctatggtaat ggggcgtgtg acttttgatg gcatgggtaa
    12841 gcgtgctctt ccaaatcgtc attccttagt actgacaagt gatgaaacct atcaagttga
    12901 gaatgaccga gtcacagtct tgcacaatgt agaagctgtt ctagactggt accatcaaca
    12961 agaaggaacc ttgtttgtcc ttggtggtgg acaaattttt actgcttttg caccttacat
    13021 tgaaacatta atagtgacag atattcacgg tcaatttaat ggcgatgtgt attttccgaa
    13081 agcatttcct atggagaaat ttcagctaca aagcgccaat ttacgtccaa aagacgagaa
    13141 aaacccgtat gattttacaa taaaaaccta tgaaagaaga gatggttagg catggagaga
    13201 agtttattcg gtttatttac agcatttctc tgtgggattt gtgttctttg tgcgattcaa
    13261 gcctttcgga agaaacgttt tggtttagca attttatttt tactgaatgc ttttaccaat
    13321 ctggtcaata gtattcatgc catttacggc tttttattta gataagagat atgaaagagg
    13381 aattacatgg ctgttaagca tacacatgag tttatttatt gctcattttg tggaaaaaat
    13441 caagaagaag taaaaaaaat tatcgctgga aacaatgtgt ttatctgtaa tgaatgtgtg
    13501 gaattagctc aggaaatcat tcgtgaggaa ctggcagaag aagtattgac tgacctggct
    13561 gacacgccaa agccacaaga attgctcaat attttaaaca attatgtcat tgggcaagac
    13621 cgtgcaaagc gtgccttggc agtagctgtt tacaaccact acaagcgtat caatttccag
    13681 gatagccgtg atgagagcga tgttgatttg caaaaatcaa atatcctcat gattggcccg
    13741 actggttcag gtaagacttt cttggctcaa accttggcca aaagtttgaa tgtaccattc
    13801 gccattgcag atgcgacagc actaactgag gcgggttatg ttggtgaaga cgtagaaaat
    13861 atccttctca aacttttgca ggctgcagac tttaacatcg accgtgcaga aagaggaatt
    13921 atctatgtgg atgaaattga taagattgcc aaaaaaggtg aaaatgtgtc cattacccgc
    13981 gatgtatctg gtgaaggtgt ccagcaagct ctcctaaaaa ttatcgaggg aactgtggcc
    14041 agcgtaccac cacaaggcgg acgcaaacat ccaaaccaag aaatgattca cgtggacacc
    14101 aaaaatatcc tgtttatcgt tggcggtgca tttgatggta tcgaagaaat cgtcaaacag
    14161 cgtctcggtg aaaaaatcat cggttttggt cataataatc gtgctattga tgaaaaagaa
    14221 tcatacatgc aacatatcat tgcagacgat attcaaaaat tcggtatcat tccagagttg
    14281 attggtcgct tgcctgtatt tgcagctttg gaccaattga caacagagga tttggtacgc
    14341 attttgacgg aaccgaagaa tgctcttgta aaacaatacc agacactctt gtcttatgat
    14401 gacgtggagc ttgactttga tgaggacgcc ttgttagcaa ttgcagaaaa agcaattgaa
    14461 cgtaagactg gtgctcgtgg acttcgttct atcattgaag aaacgatgtt ggatgtcatg
    14521 tttgaggtgc caggccaaga taacgttaaa cgtgttcgtg taacaaaagc agcagtagac
    14581 ggtaaggaaa agcctttact agaaactgca taaaaaataa agggtggaaa ctgattgttt
    14641 tctaccctta tttatgaaag gtataaaatg gaaatcaaca cacataatgc tgagattttg
    14701 ctcagtgctg tttcaaaagc ccagtatccg ggcgatgaca ttccagaaat tgcccttgcc
    14761 gggcgatcta acgttggaaa gtcctcattt atcaatactc ttctaggaag aaaaaatctt
    14821 gcacgtacgt caggaaaacc aggaaagact caacaactca atttttataa tatagatgat
    14881 aaaattcgat ttgtagatgt tccaggttat ggctatgcta aagtgtccaa aacggagcgc
    14941 gctaagtggg gcaaaatgat tgaagagtat ttgacgacac gagaaaatct acgtgttgtg
    15001 gtgagtttag tagacatgcg tcatgagcca tcagcagatg atgttcaaat gtatgatttc
    15061 ttgaaatatt atgaaattcc tgttattatt gtggcaacga aggctgataa aatcccacga
    15121 ggaaagtgga ataagcacga atcgatgatt aaaaagaaat tggattttga taaaaatgat
    15181 caattcgtta tcttttcttc tgaaactcgt cacggatacg atcaggcatg ggatgctatc
    15241 ttaagtaaca tctaataaac tgttcaggag aaaaatcatg gaacgtactt tcttcatcat
    15301 caaaccagat gctcttaagc gtggacttgc aggacaaatt ctttcacgta tcgaacgcag
    15361 gggatttcaa atccgagatt taaaaatggt tacagcgaca gaagagctaa tcagtcaaca
    15421 ttatgaataa acctttcttc ccgcaattag tacaatatat gacgagcggg ccgatgatag
    15481 ctggcattat agaagggcca gacattatca aatcttggcg agatatgatg ggagctacca
    15541 atccagtcaa cgccctacct gggactatac gtggagattt tgcgacagcg cccgttgagg
    15601 gaattgtggc aaatgtcgtt catggctcag atagtgcaga agcagccgaa cgcgagatcg
    15661 gtctttggct gggaaaatag
//
LOCUS       DASFQS010000055        15187 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.056, whole genome shotgun sequence.
ACCESSION   DASFQS010000055 DASFQS010000000
VERSION     DASFQS010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15187)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15187)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15187
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.056"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            94..1224
                     /locus_tag="U1041_001418"
     CDS             94..1224
                     /locus_tag="U1041_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM4768526.1"
                     /translation="MNTSFKEKVILILLSGATLLAVLNWSSIYGAIQQLLGSMNSLFI
                     GAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFALIVTGLVVIVLPTLVT
                     TVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQLKNLTLISSLVTPI
                     LSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQEMTRKFLQATLPEKAVRVVNYI
                     GEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLSFVPYIGPFS
                     ACLISALFVAVQNPLLALWSIVLFQILQLIEGNVIYPRVVGQSVGLPTLFTLAAALIG
                     GNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQDELLVESE"
     gene            1296..1787
                     /gene="nrdR"
                     /locus_tag="U1041_001419"
     CDS             1296..1787
                     /gene="nrdR"
                     /locus_tag="U1041_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEM4768527.1"
                     /translation="MRCPKCQSLKSSVIDSRQAEDGNTIRRRRSCDQCGQRFTTYERI
                     EEKTLVVVKKDGTREQFSREKIFNGIIRSAQKRPVSTDDIDEVVNRIEQKVRAQGDSE
                     IESDVIGNLVMEELVELDEITYVRFASVYRSFKDVGELENLLKQMISKGSKVKPGKKD
                     ETK"
     gene            1774..2925
                     /locus_tag="U1041_001420"
     CDS             1774..2925
                     /locus_tag="U1041_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation/membrane attachment
                     protein"
                     /protein_id="HEM4768528.1"
                     /translation="MKPNDLFAYIKISPFTPDIVSLSQCYQPIIGFDALALYYYFYSF
                     ADQGQGRYKWTVILNHMDFGMNRLEKALDVLTAMGLLELYRADELTGLALQAPLTVKS
                     FLAKPLYKNLLARKIGESSMENLLVHLPNQEQNISKTFSQVFTMDGQAPVVFEPKHDF
                     DWSAFKALMAKDKLLFQDEAEDIIALSYIAEQARWTWLETYRQAKATAIGQTISTKRL
                     QQSHQSLPTESANLTAQEQAIVREAKSKSSLTFLSFIKEQRKAAVTGTERKCLTDLAN
                     LGLLDEVINVLVLYTFNKVDSANLNEKYAMKLGNDFSYKGIGSAEAAVLYLRELKTGQ
                     VVTKSSQPQKSNVPEWSKEEVQQGQTQEGQAKLAALYRELEEMENKGGS"
     gene            2925..3824
                     /gene="dnaI"
                     /locus_tag="U1041_001421"
     CDS             2925..3824
                     /gene="dnaI"
                     /locus_tag="U1041_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HEM4768529.1"
                     /translation="MKSVQDRLSQTTNPSPKSYQQLYQEIVSDPEVAAFIKKEGLTQQ
                     EITLSISKFLEYISQRDLFVKQDESYIAKGYQPVLVMNEGYADVSYLETEELVEYRRL
                     EAIKNRIQLINMPASLKNVTVADIDKSDENRVEVMLAIADFVKRFEEKPKGLYIYGNF
                     GIGKSYLMAYLANLLSKTHLQSTTMLHYPTFVVDIKNAIKDGSVKERIDEIKMAQVLV
                     LDDIGAEQHSPWVRDDVLQVILQYRMQENLPTFFTSNFSFDDLERHFASGKSGDETWQ
                     AKRVMERIRYLARDLHLKGNNRR"
     gene            3821..4534
                     /locus_tag="U1041_001422"
     CDS             3821..4534
                     /locus_tag="U1041_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM4768530.1"
                     /translation="MNETIDLMLNHTSVRRFTEEPIEAEHLQAIISAGRAASSWKNFQ
                     SYFIIVVQSEEKKQALYDLVPQPAILQAQAILVFVGDHNRASKAAQLHGSDFDAKGTE
                     NLLISSVDASLAGQNALLAAESLGYGGVFIGMIRHKALAIAELFNLPDYTYPIFCIAL
                     GRPAQNHPVKPRLASETIVFQEEYVEQGVEVIQAYDQVQTAYAGARQTETWSERMVAQ
                     FGQPEQPETRAVLEKNKLL"
     gene            4771..6081
                     /gene="der"
                     /locus_tag="U1041_001423"
     CDS             4771..6081
                     /gene="der"
                     /locus_tag="U1041_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEM4768531.1"
                     /translation="MALPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYA
                     TGEWLNRKFSLIDTGGIDDVDAPFMEQIKHQAEIAMDEADVIVFVVSGKEGVTDADEY
                     VSRILYKTNKPVILVVNKVDNPEMRNDIYDFYSLGLGDPYPVSSVHGIGTGDVLDAII
                     ENLPAQEAEENPDIIKFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFT
                     DPEGQEFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIERSDVILMVINAEEGIREYDK
                     RIAGFAHEAGKGMIIVVNKWDTLEKDNHTMKQWEDDIRDQFQYLSYAPIIFVSALTKQ
                     RLHKLPEMIKAISESQNTRIPSAVLNDVIMDAIAINPTPTDKGKRLKIFYATQVATKP
                     PTFVVFVNEEELMHFSYMRFLENQIRKAFVFEGTPIHLIARKRK"
     gene            6156..6494
                     /locus_tag="U1041_001424"
     CDS             6156..6494
                     /locus_tag="U1041_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4768532.1"
                     /translation="MVAFPIWRSFLILLSFSSFFLVFYEDSQYKPFGLRYWLGLVACI
                     WLNFVTLASYFIAFTGGSIMVYHQYKQPLVVIFLFCLFVASMLTLLSFKAIKMMIRRT
                     KYYRRVRKEV"
     gene            6496..6804
                     /locus_tag="U1041_001425"
     CDS             6496..6804
                     /locus_tag="U1041_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768533.1"
                     /translation="MDFFGELLVEFLTGLADFDEKKHPPFGIRYWLGWLGVLIHVLLL
                     ALLTCVTVFFFKFFLDGKGLINVVVAVVFLLFVLFWLWKSGKTILKMWQATIYYLAIH
                     "
     gene            6943..10035
                     /locus_tag="U1041_001426"
     CDS             6943..10035
                     /locus_tag="U1041_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4768534.1"
                     /translation="MGRMMPGRIRQEGIDLYEAGKLTVLHSENGKMVLDIAGERFTYG
                     DADSDLQCSCQLFQSKGYCQHLAATEYFLKNDASGKDMKQSLKEDGEQHKETVRRTYF
                     GGLFLDEILRPEPELGLKYQLSVEGSLLPYDRQIDWTLKITRLPDTRSYIVRDIGAFL
                     RIVKANGHYQIGKNYYEQVTYENFDEPSQALLDFLWALVPEKVGIDSDILTHFGRHFR
                     LPQAYFEEGLELLNQLEHFNFSYQQQSYSSLMVLPLTGEEGLYHFEVTVHTQMIEMVI
                     HEKTVRPLFHGRYLLVNGTVYSVNRHQEHLIYQISELVPTESSLRKVQVDFPDQNRLA
                     LSLLDLQTIGTVKAPKRFIIHDFKPEFHIQMEANESLSLQLVLDFDGRQVRSEEDLAL
                     LPFASHFQHLERIYQAIRLAGFRGTYHAQRAALSQQELYPFFQQQLPILQKMGQVYLE
                     ERLQALYIEAKPQLEIVRNGSLLDISFDLSGIEQSEIDQAITALLNQEDHYTSPSGKV
                     FVFDEETKKISQTLIYLRARHGKEGQVQVHALAGYQLAQSLSQFNQVSFSKEFEEMAS
                     YLAQPDLFPLPDAEVTTSLRDYQQTGLKWLTVLDTYGFGGILADDMGLGKTLQTIAFL
                     SSRMTKDSKVLILAPSSLIYNWLDECKRFAPSLDVAVVHGNKDQREEIIANGHQVLVT
                     SYPSFRQDVALYRQERFDYLILDEAQVMKNAQSKIAQLLREFEVGNCFALSGTPIENH
                     LTELWSIFQIVLPGLLPGKQDFGKLAAKDIARTIQPFVLRRHKEDVLQELPDLIEVNV
                     LNELTDEQKAIYLAQLQQMRTQIAGADDAQINRSKIEILSGITRLRQICDTPSLFMEE
                     FSGESGKLNSLKELLLQLKEGEHRVLIFSQFRNMLEKIEEQLVEIGMTSYTLTGSTPA
                     NQRQEMTQAFNAGSRDAFLISLKAGGVGLNLTGADTVILVDLWWNPAVEAQAISRAHR
                     MGQTEKVECYRLITRGTIEEKIQELQENKKNLVKTVLDGNENRANLTVEDIREILGIE
                     "
     gene            10114..10776
                     /locus_tag="U1041_001427"
     CDS             10114..10776
                     /locus_tag="U1041_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768535.1"
                     /translation="MIRHEKRFPLVADDEVLVGENPIMSLYDESDLISNIRGPYQEKE
                     FSGSTDSQRVASAKPVVQTEDELLPPLFEAKPSHYSRKERLQQLTKTKPSPVKTQGQL
                     AREQAREDLKKKRSATYLRDEKPAPAKVVVKPPVVSTTESKAGRLTRLADNLRQTDYI
                     LADMPAVYSLKKEDREQEQVIKKNSYDFLRKSQVYNYPERRQQRDRQVAQELNLTHIE
                     EG"
     gene            10778..12109
                     /locus_tag="U1041_001428"
     CDS             10778..12109
                     /locus_tag="U1041_001428"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015511317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEM4768536.1"
                     /translation="MTKTYHFIGIKGSGMSALALMLHQMGHKVQGSDVEKYYFTQRGL
                     EQAGIQILPFDEKNITADVELIAGNAFRPDNNVEIAYADAQGYTYKRYHEFLGEFMKG
                     FTSLGVAGAHGKTSTTGLLAHVMRNITDTSFLIGDGTGRGSANAQYFVFESDEYERHF
                     APYHPEYSIITNIDFDHPDYFTSLEDVFNAFNDYAKQVKKALFVFGEDEQLRRITANA
                     PIYYYGLEDNNDFVAYDLKPSTSGSQFKVRHGEEELGEFQIPTFGKHNVMNATAVIAN
                     LYIAGFDLQLVAEHLKTFGGVKRRFTEKIVNDTVIIDDFAHHPTEIIATIDAARQKYP
                     SKELVAIFQPHTFTRTIALLDEFADALNGADAVYLAQIYGSARETDNGQVKVEDLAAK
                     INKKGGLVTVENTSPLLDHDNAVYVFMGAGDIQSYEYSFERLLSNLTNNVQ"
     gene            12165..12650
                     /locus_tag="U1041_001429"
     CDS             12165..12650
                     /locus_tag="U1041_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768537.1"
                     /translation="MEIRFATPSDLEQVVLIENANFSKEERIAESVLAIYLNALSKTC
                     LIMEHDGEIAGYLLSCPSVSQTVTDDIFYLTESDMPTGGHLAIASLSVADTYKGQGVG
                     TLLLAAIKEVALAGGFEGIALTCKEYLIGYYEMNQFEDFGPSLSQFGGQRWSDMYWKA
                     L"
     gene            12722..14539
                     /gene="mltG"
                     /locus_tag="U1041_001430"
     CDS             12722..14539
                     /gene="mltG"
                     /locus_tag="U1041_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEM4768538.1"
                     /translation="MTKDTNEKNTQSSSFRDQILRDLEELKVKRLAEQSADVLVDKRN
                     EIINELQPSLAEEKALHREPEIVKVEGIAFPDSYLPEEQQESEVMTESIEEPTSETLA
                     TPETFVIEKEVISSPVPQDTVERNLEELRNLVAANTVEFDEAPSSSLVSEPVEPVLSE
                     KSSLEDTFLEFPTEDVSAVTGDTEVISLEETIIAPKTTAIVPEVDKQMQETQPRRRTT
                     HRTSKQRRKKQDNAAKRIVSVIMSIVVVAVLVTGVTGYMWVKSSLEPVNAKATEAIQV
                     EIPEGSSTLEIGKILVDNKLIKNATIFNYYSKIKSYNNFQSGFYNLKQNMSVDDIAKA
                     LQESGTPTAQKEAAGKILIVEGYTLTQIAQAITDNTKTEDKNDKTPFTTEQFMATVTN
                     QDFINRMVATYPKLFASLPAADSGVIYQLEGYLFPAVYEYSDETTIEELVEQMIAAMD
                     NRLQPYYETIAAKNLTVNEVLTLASLVEKEGSTDEDRRNIASVFFNRLNAAMPLQSNI
                     AILYAQGKLGQETTLAEDAAIDTSIESPYNIYWTPGLMPGPVDSPSLSAIEAVINANT
                     TDYLYFVADVTTGSVYFTNNIDEHNQHVAKYVNAHLNNE"
     gene            14613..15095
                     /gene="greA"
                     /locus_tag="U1041_001431"
     CDS             14613..15095
                     /gene="greA"
                     /locus_tag="U1041_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEM4768539.1"
                     /translation="MAEKTYPMTLEEKEKLEKELEELKLVRRPEIVERIKIARSYGDL
                     SENSEYEAAKDEQAFVEGQISTIETKIRYAEIVNSDAVAADEVAIGKTVTVQEVGETE
                     EEVYHIVGAAGADAFANKISNESPIGHALIGKKTGDVATIETPAGSYDVKILKVEKTK
                     "
BASE COUNT         4499 a         2834 c         3483 g         4371 t
ORIGIN      
        1 tgaaaagaga ggttggtctt tttgtccagc ccctctttct ttttctataa gcgtgtgata
       61 aaataatagc caataagtaa gaatggaaaa gttatgaata catcatttaa agaaaaagtc
      121 atattgatac tcttatctgg agcgacattg ttagctgttc tcaactggtc tagtatttat
      181 ggggctattc aacaattatt aggcagtatg aattcgcttt ttattggagc tatttttgcc
      241 tttattctca atgttcccat gaaaaaatta gaagatcagt ttgaaaaaat ttctttttta
      301 aagaaatcca agcggtcttt ggcaattgtt ggagtattaa ttggatttgc tttaattgtg
      361 acaggactgg tggtgatcgt tcttcctaca ttggtgacga ctgtttcaga gctggtttcg
      421 gttagcagca cagccattcc aaaatcggta aatgccctaa ctaattttct tgaatcaaat
      481 ggtcttttgt cgggacaaat cggagaccag attgccagct ttttggatca gttgaagaat
      541 ttaacactta tttcaagttt ggtcacaccg attttatctg gcttggtgtc caatgtgacg
      601 gggatttttt cgaacactat gacgttgata atggctttct tcttcactct agcgatttta
      661 gggagcaagg aacacttgca ggagatgacg agaaagttct tgcaggctac cttgccagag
      721 aaggctgtca gagtagtgaa ctatattgga gaagttattg ttgataccta tgaccgattc
      781 ttgatgagtc agattgttga ggcgtgtatc attgggacac ttgtctttgt tagttattcg
      841 ctctcaggaa ttccttatgc cagcatggct ggtattttag ctggggtcct atcgtttgta
      901 ccttatatcg gtcccttttc agcgtgtttg attagtgctc tctttgtggc ggtacaaaat
      961 ccgctcttgg cactctggtc tatcgtgctc ttccagattc ttcagttgat tgaagggaat
     1021 gtgatttacc cgcgcgtggt tggtcaatca gttggtcttc cgactctctt taccctagca
     1081 gcagccttga ttggtggaaa tttgtttggc ttgcttggta tggtcttctt taccccaatt
     1141 tttgcggttg tctaccgcct ggttcgtgaa tgggttgcca gtcgattgaa gaagcaagat
     1201 gaattattgg tagaaagtga gtaattctcg ctttctttta tttttgtcat ttttatgcta
     1261 tactgaagtg ataaagttta tgtaggagaa agagtatgcg ttgtccaaaa tgtcagagtt
     1321 tgaaatcaag tgtcattgat agtcgtcagg ctgaagatgg caataccatc cgtcgtcgtc
     1381 gttcctgcga ccaatgtggt caacgtttta ccacctatga acggattgaa gagaaaactc
     1441 tagtcgttgt gaaaaaagac ggaactagag agcagttttc acgtgaaaag attttcaatg
     1501 ggattattcg ttctgctcaa aagcgccctg tgtcaaccga tgatattgat gaagtggtga
     1561 atcggattga acagaaggtt cgagcacaag gtgatagtga aatagaatcc gatgtcattg
     1621 ggaatttggt aatggaagaa ttggtcgaat tggatgaaat cacctatgtg cgttttgcat
     1681 cggtttatcg ttctttcaaa gatgttggag agctagaaaa tttgcttaag cagatgattt
     1741 ccaaaggaag taaggtaaaa ccgggaaaaa aagatgaaac caaatgattt atttgcctat
     1801 ataaaaatca gcccgtttac acctgatatt gtcagtctta gccaatgcta ccagccgatt
     1861 atcggttttg atgcattagc gctttattat tacttttata gttttgccga tcaagggcaa
     1921 ggacgttaca aatggactgt cattcttaat cacatggatt ttgggatgaa tcgtttggag
     1981 aaggctctgg atgttctgac tgccatgggg ctcctagaac tctatcgtgc agatgaatta
     2041 acaggtttgg cgctacaagc ccctctgacc gtaaaaagtt ttctagcgaa acccttgtat
     2101 aagaacttgt tagcaaggaa gattggggag tcaagcatgg agaatctgct tgttcaccta
     2161 cccaatcagg aacagaatat ctcaaaaaca ttttctcagg tctttactat ggatgggcag
     2221 gctccagttg tttttgaacc gaaacatgat tttgactggt ctgccttcaa ggcattaatg
     2281 gctaaagata agcttctttt tcaggatgaa gctgaggata ttattgcgct tagttacata
     2341 gcagagcagg caaggtggac ttggttggaa acctatcggc aagctaaagc aacagctatt
     2401 ggacagacga tctcgaccaa acgcttgcag cagtcacatc agtcattgcc aacagaaagc
     2461 gccaatctca ctgcccaaga acaagccatt gttcgtgaag cgaaatcaaa atccagccta
     2521 accttcctgt cctttatcaa ggagcaacgg aaggcagcgg tgacaggaac agaacgaaaa
     2581 tgcttgacgg atttggccaa tttgggtctg cttgacgaag ttatcaatgt cttggtcctc
     2641 tataccttta acaaggtgga ctcagccaat ctaaatgaaa aatacgctat gaaactgggc
     2701 aatgattttt cctacaaggg aattggcagt gcagaggcag ctgttcttta cctaagagag
     2761 ttgaagacag gtcaagttgt taccaagtcg agccagccac agaaaagcaa tgtgcctgag
     2821 tggagtaagg aagaggttca gcaaggacaa acgcaggaag gtcaagccaa gctggcggct
     2881 ctttatcgtg aattagaaga aatggaaaac aaaggaggta gctgatgaaa tcagttcaag
     2941 acaggttgtc gcaaacaacc aatccaagtc caaaatctta tcagcaactc tatcaggaga
     3001 tagtgagtga tcctgaagtc gctgctttta tcaaaaaaga aggtttgacc cagcaggaaa
     3061 tcaccctctc catttctaag tttttggaat atatcagtca acgtgacctc tttgtcaaac
     3121 aggatgaatc ctatattgcc aaggggtatc aacctgtttt ggttatgaat gagggctatg
     3181 cggatgtttc ctatcttgag acagaagaat tggtcgaata ccgtcgtctg gaagctatca
     3241 agaaccgtat ccaacttatt aatatgccag caagtttgaa aaatgtaacc gtggcggata
     3301 ttgataagag tgatgaaaat cgtgtggaag tcatgctggc tattgcagat tttgtcaaac
     3361 gatttgagga aaaaccaaaa gggctttaca tctatggcaa tttcggtatt ggaaaaagtt
     3421 atttgatggc ttatttagcc aatcttttgt ccaagaccca tcttcaatca accaccatgc
     3481 ttcattatcc aacctttgtg gtagatataa aaaatgccat caaagatggt tctgtcaagg
     3541 agcggattga tgaaatcaag atggctcagg tcttggtgct agatgacatc ggagcggagc
     3601 aacatagtcc ttgggtacgt gacgatgtcc tgcaggtcat tcttcaatac cgcatgcagg
     3661 aaaatctgcc gaccttcttt acctccaatt tctcctttga tgatttggag cgtcattttg
     3721 cctctggcaa gtctggtgat gagacctggc aggccaaacg ggttatggag cggattcgct
     3781 atctggctcg cgatttgcat ttgaaaggaa ataaccgccg atgaatgaaa ccattgattt
     3841 gatgttgaac catacttccg tacgtcgttt tacggaggaa cctattgagg cggaacattt
     3901 gcaagctatt atttcagctg ggcgagctgc gtctagctgg aagaatttcc agtcctattt
     3961 cattattgtg gtgcagtcgg aggagaaaaa acaggctctc tatgatttgg tgccccagcc
     4021 agctatttta caggctcagg ccattctggt ttttgtgggc gaccataatc gtgccagcaa
     4081 ggctgctcaa ctccacggtt cagactttga tgccaaagga acagagaatc tcctgatttc
     4141 ttctgttgat gcaagcctag cagggcaaaa cgccctttta gcagctgaaa gcctgggtta
     4201 tggtggggtc tttatcggta tgattcgcca taaggccttg gcaatagcag agctgttcaa
     4261 cttgccagat tatacctatc ctattttctg cattgccttg ggtcgaccag cccaaaacca
     4321 tcctgttaaa ccacgtttgg caagtgaaac cattgtcttt caggaagaat atgtggagca
     4381 aggcgtggaa gtaatccaag cctacgacca agttcagaca gcctatgcag gagcccgtca
     4441 gacagaaacc tggtcggagc gtatggttgc ccagtttggt cagccagagc agcctgaaac
     4501 gagggctgta ttagaaaaaa ataaactatt gtaagttata gtctttttat ttgcttttag
     4561 tactcgctca aactgtctgg gagacagttt gagattggag ataaagtgaa ccaagttcac
     4621 atcaaaagct gcagatagta ctggagtacg gcaaagcgag ttcaaataat gatgacatta
     4681 tttgaagttg gaaataggga aacgaagttt cctcatgcgt cgacgtaata aaagataaac
     4741 gaaaacgact atattagaag aggaggagct atggctctac caactatcgc catcgttggc
     4801 cgtcccaacg ttggtaaatc aacactattt aaccgtattg cgggggaacg tatttctatc
     4861 gtagaagacg tggaaggtgt gacccgcgac cgtatttatg ctactggtga gtggctcaac
     4921 cgtaagtttt ccttgattga tacaggcggt attgatgatg tggatgcacc ttttatggaa
     4981 caaatcaagc atcaggctga gattgccatg gatgaagcgg acgttatcgt ctttgtcgta
     5041 tcaggcaagg aaggtgtgac ggatgctgac gagtatgtat cgcgtatcct ttataagaca
     5101 aacaaaccag ttattttggt tgtcaataaa gtagataacc ctgaaatgcg taatgacatt
     5161 tacgatttct attcactcgg tcttggagat ccttatccag tatcttctgt acacggtatc
     5221 ggaacagggg atgtcttgga cgctatcatt gaaaacctac cagctcagga agcagaagaa
     5281 aatccagata ttatcaagtt cagcttgatt ggtcgtccga acgttggtaa atcaagtttg
     5341 attaatgcta ttttgggtga agagcgcgtg attgcgtcgc ctgttgcggg aacgactcgt
     5401 gatgctattg atacgcactt tacagaccca gaaggtcaag aatttaccat gattgatacc
     5461 gcagggatgc gcaagtctgg taaggtctat gaaaataccg agaaatactc tgttatgcgt
     5521 gccatgcgtg ccattgaacg ctcggatgtc atattgatgg ttatcaatgc tgaagagggt
     5581 attcgtgagt atgacaaacg catcgcaggt tttgcccatg aagctggtaa ggggatgatt
     5641 atcgtagtca acaagtggga cacgcttgaa aaagacaacc ataccatgaa gcagtgggaa
     5701 gacgatattc gtgaccagtt ccaatacttg tcttacgcac cgattatctt tgtgtcagcc
     5761 ttgaccaaac aacgcttgca taagttgcct gagatgatca aggctatcag tgaaagtcag
     5821 aatacccgta ttccatcggc tgttctcaac gatgttatca tggacgccat tgccatcaat
     5881 ccaacaccga ctgacaaggg taaacgtctc aagattttct atgcgactca ggttgcgacc
     5941 aaaccaccga cctttgtggt ctttgtcaac gaagaagagc tcatgcactt ctcctatatg
     6001 cgtttcttgg aaaatcaaat ccgcaaggcc tttgtatttg aagggacacc gattcatctg
     6061 atcgcacgga aacggaaata agaaagagag gtcaaacctc ttttttcttt gcaattattc
     6121 gtaaatatgc tagaatggga ctaggaggtg ttggtatggt agcgtttccg atttggcgtt
     6181 cttttttgat attgctttct ttttcatcat tttttcttgt attttatgaa gacagtcaat
     6241 acaagccttt cggtcttcgg tattggctgg gactagtagc ttgcatctgg ctcaattttg
     6301 tgactttggc atcctatttt atcgccttta ctggtggttc aattatggtc tatcatcagt
     6361 ataaacagcc attggttgtg atattccttt tttgtctatt cgtggctagt atgctgacct
     6421 tactttcctt taaggctatc aagatgatga ttcgacgaac caagtattat cgacgggtaa
     6481 gaaaggaagt ctagtatgga tttttttggt gagttgctag ttgagttttt gactggtcta
     6541 gcagacttcg atgaaaagaa acaccctccc tttggaattc gctattggct gggctggttg
     6601 ggagttctga ttcatgtttt actccttgcc ttgcttactt gtgtgactgt cttctttttc
     6661 aagtttttct tggatggaaa aggcttgatt aacgtggtag tggcagttgt tttcctgcta
     6721 tttgtcctat tttggctttg gaaaagcgga aaaacgatct tgaaaatgtg gcaagcaacg
     6781 atttattatt tagctattca ttagagacac cagtttacca gctggtgttt tttgatacct
     6841 atttaaacaa ttcaaattga aaatatgcta taatgaaaag ataatatttt agatatattt
     6901 tacagaagag ctgatgattg tttgaaggat aaaggagtta gaatgggtcg catgatgcca
     6961 gggcggattc gccaagaagg aattgatttg tacgaggctg gaaaactaac tgttcttcat
     7021 agtgagaatg gaaagatggt gctggatatt gctggtgagc gctttactta cggcgatgca
     7081 gatagcgatt tacagtgtag ttgccagtta tttcaaagta agggctactg tcaacaccta
     7141 gctgccacgg agtatttttt aaaaaatgat gcctcaggca aggatatgaa gcagtctttg
     7201 aaagaagatg gtgaacaaca taaggaaacc gtccgtcgga cttattttgg cggtctcttt
     7261 ttagatgaaa ttttgcggcc agaacctgaa ctggggctta agtatcagtt atcagttgaa
     7321 gggagcttat tgccctatga tcgtcagata gattggacct tgaaaattac ccgcttgcca
     7381 gatacacgtt cgtacattgt gcgggacatc ggagcttttt tgcgcattgt gaaagccaac
     7441 ggtcactatc agataggtaa aaattattat gagcaagtta cttatgaaaa ttttgatgaa
     7501 ccaagtcagg ctcttctgga ttttctctgg gccttggtac cagagaaagt tggtatagat
     7561 tcggatattc ttactcattt tggacgacat tttcgtctgc cacaagccta ttttgaggaa
     7621 gggttggagc tgttaaatca gctagaacat tttaactttt cctatcaaca gcagtcttat
     7681 tcctccttga tggttcttcc gttgacaggt gaggaagggc tctatcattt tgaggtgacc
     7741 gttcacacgc agatgattga aatggttatt catgaaaaaa cagtccgacc tctttttcat
     7801 gggcgctatc tcttagtaaa tggcacggtt tatagtgtca atcgccatca agaacatctg
     7861 atttaccaaa tttccgaact tgttccaacc gaatcaagtt tgagaaaagt gcaggtggat
     7921 ttccctgacc aaaatcgtct ggctttaagc ttgctggatt tgcagacaat tgggactgtt
     7981 aaggcaccta aacgcttcat cattcatgat ttcaagccag aatttcatat tcagatggag
     8041 gcaaatgaaa gtttatcact ccaattggtt ttggattttg atggacgtca ggtaaggagt
     8101 gaagaggatt tggctctcct gccttttgct agccatttcc aacatttgga gaggatctat
     8161 caggctattc gtttagctgg ctttaggggg acatatcatg cccagagagc ggctcttagt
     8221 cagcaggagc tctatccatt tttccaacaa caattgccta tattacaaaa aatggggcag
     8281 gtttatctag aagaaaggct ccaggcttta tatattgaag ccaaacctca attagaaatt
     8341 gtgcgtaacg gctcactttt ggatatttcg tttgacttat caggtattga acaatctgaa
     8401 atcgatcagg cgattacagc cttgctgaat caagaggatc actatactag cccgagcggt
     8461 aaggtatttg tttttgatga ggaaaccaag aaaatcagtc aaaccctaat ctatctgcgg
     8521 gcccgtcatg gtaaggaggg gcaggtacaa gtccatgctc ttgccggtta ccaattggct
     8581 caatccttgt cacaattcaa ccaagtcagt ttctccaagg aatttgagga aatggcaagc
     8641 tatctagctc agccagattt gttcccgctt cctgatgcgg aagtaacaac gtcgcttagg
     8701 gattatcagc agacagggct taagtggttg actgtgctgg atacgtatgg ttttggtgga
     8761 attttagctg acgacatggg gcttggaaag accttgcaaa ctatcgcctt tctgtccagt
     8821 cggatgacaa aagattccaa agttttaata ttggcaccgt ctagcttgat ttataactgg
     8881 ttagatgagt gcaagcggtt tgctccaagt ttagatgtgg ctgttgtcca tggaaacaag
     8941 gaccagcgtg aagagatcat tgccaatggt caccaagtcc tagttacctc ctatccatcc
     9001 ttcagacagg atgttgcact ctatagacag gaacgctttg actacctcat tttagatgag
     9061 gcgcaggtta tgaaaaatgc ccaatctaag attgcacagc tcctgcgtga gtttgaggtt
     9121 gggaattgct ttgccctctc aggtacgccg attgaaaacc atttgacgga actctggtcc
     9181 attttccaaa ttgtcttacc aggtttattg ccaggcaaac aagacttcgg taaattagca
     9241 gccaaggaca ttgcgcggac cattcaaccc ttcgttctca gacgtcataa ggaagacgtt
     9301 cttcaggaat tgcctgattt gatagaagtc aatgtactta atgaactaac agatgaacaa
     9361 aaagccatct acctagccca gcttcaacaa atgcggactc aaatagctgg cgcagatgat
     9421 gctcaaatca atcgtagtaa gatagaaatc ctatcaggaa ttactcgctt acgtcaaatc
     9481 tgcgataccc ccagcctttt catggaagag tttagtggtg agagtggcaa actcaatagt
     9541 ttgaaagaat tactcttgca actaaaagaa ggtgaacaca gggtcttgat attctcccaa
     9601 ttcagaaata tgctggaaaa aatagaagaa cagctggtag aaattgggat gacatcctat
     9661 actctgactg gttcaacccc tgctaaccaa cgccaagaaa tgacacaggc cttcaatgca
     9721 ggaagtcgag atgcctttct catttccttg aaagcaggtg gcgttggctt gaatttgaca
     9781 ggtgcagaca cagtcatcct agtcgatctt tggtggaatc ctgccgtgga agcgcaggct
     9841 atcagccggg ctcatcgcat ggggcagact gaaaaggttg aatgctatcg cctgattact
     9901 agagggacaa tcgaagagaa gattcaagaa ttacaagaaa ataaaaagaa ccttgtcaaa
     9961 acagtccttg atggcaatga aaaccgagcg aatttgacgg ttgaggatat tcgtgagatt
    10021 ttagggattg agtgatatgg aatcagttgg ctcagcgtag aattaggaaa taaggcctaa
    10081 gtatggtata ataagggttc gaaaggatga cttatgatta gacatgaaaa aagatttcca
    10141 ctagtcgcag atgatgaggt actagttgga gaaaatccaa ttatgagttt atatgatgag
    10201 agcgacctga ttagcaatat caggggacct tatcaagaaa aggaatttag cgggtctacc
    10261 gattcacagc gagttgcgtc ggcaaaacca gtagtacaaa cggaagatga gctcctgcct
    10321 cctctgtttg aagctaagcc aagccattat tctcgcaagg aacgccttca gcaactgact
    10381 aaaacgaagc cttctccagt gaaaacacag gggcagttgg ctcgtgaaca ggctagagaa
    10441 gacttgaaga aaaaacgatc agcaacctac ttaagagatg aaaaaccagc accagctaaa
    10501 gttgtggtga aacctcctgt cgtttcaaca actgaatcta aggcaggtcg gttgacacgt
    10561 ttggcggaca acttacgtca gacagactat attctcgctg atatgccagc tgtctattct
    10621 ttgaagaaag aagatagaga acaggagcag gttataaaga aaaattcgta tgacttttta
    10681 agaaagagtc aggtttacaa ttatcctgag cgcagacaac aacgagatcg ccaagtggca
    10741 caagaattga atttgacaca tatagaagag ggataacatg acaaaaacct atcattttat
    10801 cggaattaag ggatcaggta tgagcgcact tgctcttatg ttgcatcaaa tggggcacaa
    10861 ggttcaaggt agtgatgtag agaaatacta ctttacacaa cgtgggcttg aacaagctgg
    10921 gattcagatt ttaccgtttg atgagaaaaa tattacagca gatgttgaat tgattgctgg
    10981 taatgctttt cgtccagata acaatgtgga aatcgcttat gctgatgccc agggctatac
    11041 ctacaaacgt taccatgaat ttctaggtga atttatgaaa ggttttacga gcctcggtgt
    11101 tgctggtgcc catggtaaga cctctacaac gggattattg gcacatgtta tgcgcaatat
    11161 cacagatact tccttcttga ttggtgatgg tactggtcgc ggttcggcaa atgctcagta
    11221 ttttgtgttc gaatccgatg aatacgaacg tcactttgcc ccataccatc ctgaatacag
    11281 catcattacc aatattgatt ttgaccatcc agattatttc actagtctag aggatgtttt
    11341 caatgctttc aatgactatg cgaagcaagt aaaaaaagct ctcttcgttt ttggtgaaga
    11401 tgagcaactt cgtcgtatca cggcaaatgc tccaatctac tattatggct tggaagacaa
    11461 taatgatttt gttgcctatg acttgaagcc ttctacaagt ggttcacaat tcaaagttcg
    11521 ccatggtgaa gaagagttgg gagaattcca aattccaacc tttggcaagc ataatgtgat
    11581 gaatgcaaca gctgttattg ccaatctcta tattgctgga tttgatttgc aactggttgc
    11641 agaacacctg aagacatttg gaggtgtcaa acgtcgcttt acggagaaaa ttgtcaatga
    11701 tactgttatc attgatgact ttgctcacca tccaacggaa atcattgcaa ccattgatgc
    11761 ggcacgtcag aagtatccta gcaaggagtt ggtagccatc ttccaaccac atacattcac
    11821 tcgtaccatt gcacttctcg atgagtttgc agatgctttg aatggagcag atgcagttta
    11881 ccttgctcaa atttatggct cagcgcgtga aacagacaat ggtcaggtta aggtagaaga
    11941 tttggcggct aaaatcaaca aaaaaggtgg acttgttaca gttgaaaata cttcaccact
    12001 tttagaccat gacaatgcag tatatgtatt tatgggagct ggtgatattc agtcctatga
    12061 atattccttc gaaagactct tgtcaaatct tacaaataac gtccaataaa aagaaagacg
    12121 gaggcctatg gcccctgttt ttccgctata taagggagaa aattatggaa attcgttttg
    12181 ctactccttc ggatttagaa caagttgttt tgattgaaaa tgccaatttt tctaaagagg
    12241 aacggatagc tgagtctgtt cttgccattt atctgaatgc tttgagtaaa acctgtttaa
    12301 taatggaaca cgatggggaa atagcaggat atttattatc ctgtccttct gtttcgcaga
    12361 ctgttacaga cgatattttt tacttgacag agagtgacat gccaacaggc ggtcacctag
    12421 ctattgccag tctatccgta gcggatacct ataaaggaca gggagtggga actcttttgt
    12481 tggcagccat aaaagaagtg gctttagcgg gaggatttga aggcattgct ctaacctgta
    12541 aggagtattt gattggctac tatgaaatga accagtttga agattttggc ccctccttgt
    12601 cgcaatttgg aggacaaagg tggagtgata tgtactggaa agccttgtag aaagggaagt
    12661 tcttgcaatt cataagcctt taagatataa tgtatagtaa ctgtgtgaaa ggagtaacag
    12721 cgtgacaaag gatacgaatg aaaaaaacac gcagtcttca agcttccgcg atcaaatttt
    12781 acgagatttg gaagaattga aggtgaaacg tttggcggaa caatcagcgg atgttcttgt
    12841 tgataagcgt aacgaaatta tcaacgagct ccagcctagt cttgccgaag aaaaagccct
    12901 ccatagagag cctgaaattg taaaagtaga aggtattgct ttccctgatt catacttgcc
    12961 agaagaacag caagaatcag aagtgatgac ggaaagtatt gaagagccaa catcagaaac
    13021 tttggctact ccagagactt ttgtgattga aaaagaagtc atttcaagtc cggttcctca
    13081 agatacggtg gagaggaact tggaagagct acgaaacctt gtagcggcta atactgtaga
    13141 atttgacgag gctccatcaa gctcgttggt ttccgaacca gttgagcctg tcctttcaga
    13201 gaagtcttct ttggaagata catttttgga atttccaacg gaagatgtat cagctgtaac
    13261 gggtgataca gaggttatct cactggaaga aacaattata gctccaaaga caacggctat
    13321 tgttccagaa gtagacaagc agatgcagga aacacaaccc agaagaagaa caacccacag
    13381 aacaagcaag caacgtcgta aaaaacaaga taacgctgcg aaacgcattg tctctgttat
    13441 catgtcgatt gttgtagtgg cagttctagt gacaggtgtt actggttata tgtgggtaaa
    13501 atctagtctg gaaccagtta atgcaaaagc tacagaagct attcaggtag agattccaga
    13561 aggatcttca actttagaaa ttggtaaaat tttagttgac aacaagttga ttaagaatgc
    13621 tactattttt aattactact ctaaaattaa gagctataat aatttccaaa gtggttttta
    13681 taatttaaaa caaaatatgt ctgtggatga catcgccaaa gcacttcaag aaagtggcac
    13741 tccgacagct caaaaagaag ccgcaggtaa gattttgatt gttgaagggt atacactgac
    13801 acaaattgct caggctatta cagataatac caagacagaa gataaaaatg ataaaacacc
    13861 atttaccaca gaacaattta tggctactgt gaccaaccaa gattttatta atcgaatggt
    13921 tgctacttat ccaaaattgt ttgccagctt acctgctgct gatagtggag ttatttatca
    13981 gttagaaggt tacctcttcc cagcggttta tgaatacagc gacgaaacaa ctatcgaaga
    14041 gctcgttgag caaatgattg ccgcgatgga taatcgttta caaccatatt atgaaacgat
    14101 tgctgctaag aatttgactg taaatgaagt tcttaccttg gcatctttgg ttgaaaaaga
    14161 aggttctact gatgaagatc gtcgaaacat tgcaagtgtc ttctttaacc gcttgaatgc
    14221 agcaatgcct ctacaatcca atattgcaat cttgtatgct cagggtaaac ttggtcaaga
    14281 aacaactctg gcagaagatg cagcgattga tacatcaatt gagtcaccat acaatattta
    14341 ttggacacca ggattgatgc ctggaccagt ggatagtcca agcctttcgg ctatcgaggc
    14401 agtgattaat gccaacacga cagactatct ttactttgta gcagatgtca caactggaag
    14461 tgtttacttt acaaataata ttgatgaaca taaccaacac gttgctaagt atgtaaatgc
    14521 acatcttaat aatgagtaaa ttcttacaac aaaattatgt ggttttccac ataattttgt
    14581 tttcatgaaa aataaaagaa aaggaaagac aaatggcaga aaaaacatat ccaatgacct
    14641 tggaagaaaa ggaaaaacta gaaaaagaat tagaggaact aaagctagtt cgtcgaccag
    14701 aaattgttga acgtattaaa attgctcgtt catacggaga cctttcagaa aactctgagt
    14761 acgaagcagc taaagatgaa caggcttttg ttgaaggtca aatctcaaca atcgaaacaa
    14821 agattcgcta tgctgaaatc gtaaacagtg atgcagttgc tgcggatgaa gtggcaattg
    14881 gtaagactgt gactgttcaa gaagttggtg agactgagga agaagtctat catatcgttg
    14941 gtgctgcagg tgcagatgcc tttgcaaaca agatttcaaa cgaaagccca attggtcatg
    15001 ctttgattgg taaaaaaaca ggagatgttg caacaattga aacacctgct ggtagttatg
    15061 atgtaaaaat cttgaaggtt gaaaaaacga aataaggtgt ggagagagtc gaaagattct
    15121 ctcttttttt atagacaata tgtaaagacc tctaattgag tgtgataatt cctgttagaa
    15181 gttgatt
//
LOCUS       DASFQS010000056        15036 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.057, whole genome shotgun sequence.
ACCESSION   DASFQS010000056 DASFQS010000000
VERSION     DASFQS010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15036
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.057"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            591..1286
                     /locus_tag="U1041_001432"
     CDS             591..1286
                     /locus_tag="U1041_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylase"
                     /protein_id="HEM4768540.1"
                     /translation="MEESLIKSKQRVQKHGEVFTPAWMVQKMLDTPGVKEACESVYKT
                     FLEPSAGDGNFLQAILERKLEAVVRQYDKRNWKTKSLVALSSIYGIEFLEDNLEVARS
                     RMFLCYLDWYEQAFGTRLNSKNDIYQSAHYLIHKNIVRGNTLTQQHPVTGEPIRFNEW
                     QLVKGHPSLVRKIPFALSELLGKEVEDDRTVVEGQLSFFDIDDEFMIENESVKKADTI
                     KEITIQKVYLLGD"
     gene            1290..5663
                     /locus_tag="U1041_001433"
     CDS             1290..5663
                     /locus_tag="U1041_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HEM4768541.1"
                     /translation="MISNFDFLAIDIDTAELFRTINMAEENYTHGDYEGTLTKVRKVA
                     ENTARLVADREYLDIRERATFNDVLSEIKGLIDNKTIIDHFYDIKGKGNNSAHVLNPE
                     DATKENALKSLKQVFEILAWVMLTYIEPDIKASAIGHFLEPRAQEMYTTAERKFIYIQ
                     TVNNESGLFNAFEGTQKIGEGSISSDDIETDWSPNSDFLRTVAPKRINQYMKTSGLPY
                     TLGWVELAYKKATKSWFHDYDVHNVLKRSGIKQAEQLEGTEWFKTDLETAKAAIKAVK
                     EGRNYLNITAKESFIEEPVITLRPEQEAAVEQTQKVFKKKDRMLWNAKMRFGKTLTSL
                     QLVKNEAFQRVLIMTHRPVVADSWFDDFKKMKMSADGYDYGSVNQGETLENLKRGEKP
                     FVYFASIQLLRYNGGQTNLKDFADVDWDLIIIDEAHEGTQTELSDSVMKELVKEHTKI
                     LELSGTPFNLLDQFDEEQVYTWDYVMEQQAKKKWELERPSEPNPYETLPKVSMYTFEM
                     KHKERFSDESKSFNFREFFRVAEDGQLVYKQEVRQFLDNITHPDSRTNYPFSTKSYRE
                     ELRHTLWLMPGVKEANAFEDLLKEHPIFGKEYKIVNVVRGASSDDGIANDADIEKVRS
                     AIGKDPSQTKTITLTVRKLTTGVNIPEWTAVLFLSNTNSAMNYLQAAFRAQTPFSHEK
                     LGMKTNCYVFDFAPDRALTVMAESAQINSGVGKKNTQAQKQAMARLLNFMPILGASDN
                     GMKTYDVDRMLTQLKKVYAEKAVRSGFEDDSLYNDNLLTLTADDASMFTKLNAIVGKT
                     QSQKTPKKVVINENGLTTEEHEQAEKAKKKPKAKRTAEDLEVIEKQKEAKKQRKNMIS
                     ILRGVSIRIPMMIYGMAVDLSKDITIQDFIKQVDDESWKEFMPKGFTKGMFSEITKYY
                     DAEVFIEAGRIIRQRAKSFDDLDFIERAEQIAELFGTFKNPDKETVLTPWRVVNLQVS
                     KSVGGLNFYDDNFESVTDGATSNLHWVSNEVTPSIYQRDTKILDINSKTGLYPLHSAI
                     SLYYQRVAENDDNHFEADQVYQEILANNIYAIAKTPMAKTITERTLTGYRKYKTNVTY
                     IESLTNTLKTDSEQGKKLVEEAFNKVKFDVVIGNPPYQEETKGTSDNPIYHNFIDLSY
                     QIAEKVCLITPARFLFNAGKTPKVWNQKMLTDEHLKVIYFSQKSDEVFPNTDIKGGVA
                     VTYRDSNEDFGAIETFTPFDELNEMYRLVTHHKDFSSLSELVYAPESYKLTSQLHEEF
                     PQLESRLSKGHKFDVTTNIFEKLPEIFKDIKSDSTYVEIIGRQNNERVNKFVRADYIK
                     GPDNFEKYKVFLPKANGSGAIGEVLSTPLVGTPLVGTPLVGHTQTFLSIGSFNTEYEA
                     HSLLKYIKTPFARTLLGILKITQDNKKSVWKYVPVQNFTNKSDVPWDKSIDEIHDYLC
                     SKYHYEESHRKFMDSYISKMD"
     gene            5819..9577
                     /locus_tag="U1041_001434"
     CDS             5819..9577
                     /locus_tag="U1041_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000134272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEM4768542.1"
                     /translation="MTEFKFNKLTPLSNVNIDPSHDAAMKYALEDKGIKNVAISGNYG
                     SGKSSFIETYKSKNSNFKPLHISLAHFFSHNNFENEKNAHSDMTQDQTEKRDVKEQIN
                     IIEGKIINQLLHQIDSKYIPMTIFKSKKNPELSEILKLSTAFLLFLLPIMFLWNYTQL
                     AILVRELFPDFPHIGKSVRIVAYLILMSNLVFTVYRLSALQLKRRLIKTISFRGANIS
                     GDVEVFQNEDDSYFDKYLDDVLYLFDNCQSDVIIFEDIDRFETNLIFEKLREINTLVN
                     NKRNAGKKLLFVYLIKDDMFISQDRTKFFDFIIPIIPVITSSNSGEKLGEILTNLGEA
                     SSVSKSLLKQVAIYIDDMRLAYNICNEFVLYKNNLFSQEENDNNKLNLSSDKIFAIIV
                     YKNIFPKDFSLLQKDSGFVYQLFSRIDDLKRISLDKKSAEIEKIEEKIISSEQEFSRN
                     KLELYSTYLKVPEGRVAIRVNGKTESQFPHRLDFIREILSEGAEIESVKVDDYYSRLN
                     GRKEELEDIFPMNDISFQERLSALDNQNYLNELNSKLEKLREEYESVKSEKLSVLINR
                     NFFDIVMEEYPYLKREKNSLIMYLLRNAYIDESYPDYITYFYPNSLKKQDKEFLNAVQ
                     GEIKLDWDYSLKEVAEVNERLDNSDFMRIYALNFDLFEYLLQKQDKKRLKSYLSEANV
                     KFVNKFLQQNSRHITAKISALLYLIDLNQKTLKSLLTSDDILEKEKLQIIILLLSFID
                     FSEVIWQEDLQEVMYSFVNSNWSYIQETVDNFNELINNTQIQDNLKFMEVKIKDFNFE
                     DKHKEISDFVYDNNLYDVNVKNVRSLSFYLDGNFKEDSLIKQPITTVRKFDKLFSYIE
                     KNIDRFVTEFIPYMSDNLCDKWLDMYYLLNHNEVTSDNRIEYLKRVQNNILDFEQLDD
                     VIIKDAAIAFNKARFSTKNILDYFCEYHSWNDRLIEFVNNGEHLDFLQTEFKGFSDEL
                     QEEFFQETVKCNQLDNDKYREIISKLGWHYTEFELENIADEKMSILIGTRCISDKFSV
                     DTLNFLRDNYQNHVIEYLIEYIEGYLLENEGDTDVYHESEMISLLDEVLTDEDKFKVI
                     DKFPSSISLSDKNYSTAVIDYILQNKFDEEDLKFFISNYKILSISTKSIFRKIFADYI
                     SEFLNEIDSVDKSLLYEVIEDTAIDIEHRRLVLANYIDDFSYPELLTLLNSVRLMEII
                     TSLTDNKKPKVEITGYNELILEYLKTNKKIASYHQEGDSYRIYSRKHR"
     gene            9593..11044
                     /locus_tag="U1041_001435"
     CDS             9593..11044
                     /locus_tag="U1041_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014293901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HEM4768543.1"
                     /translation="MKDKDELFCKLSHYQFSPENQYLDRKSARKKPSELLKHLIAFAN
                     ADGGQLVIGIEDEKQENIITGFKDGRAYPIDDFKKIDREMRETPLDLSFEEIPVINHK
                     GEEDFILVISVELSSNRVIAAPNDDVYLRQGDESVKLSYEQRTQLSYDKGQRFFEDEV
                     APDASLKDIDDSLVQDFKNRFDISERSVEEILKARRFLINGKLTKAAILLFGKYPSAF
                     FPQARVRFQRFDGTDMGTGSSFNVIKEVTFDDALPSLIIKARDFIRTQLREFQYLDDN
                     GQFQILPEYPEFAWFEGVVNAVTHRDYSVYGDHIRVLMFDDRLEIHSPGKLPNIVTVD
                     NIKHERFSRNPRIARTLTEFGWVREMNEGVKRIYSEMESAFLHEPKFSEPGNKVVLTL
                     ENNIVSRHLRTRDSLEKQFSDFDNLNSDEQAIIHYMYNSGERMTTAKAVELTGRSRRH
                     IGKVLQKLTDQGLLKWYGNSKNDKNQYYTLASK"
     gene            11218..12009
                     /locus_tag="U1041_001436"
     CDS             11218..12009
                     /locus_tag="U1041_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014623538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEM4768544.1"
                     /translation="MIFISYNHGDQDVVDMIAKRLEIEFGRDNIFYDKWSMQPGDSII
                     GKMDEGLEKVTTFFYFLSSNSLNSNMVKKEWQAALTKSLYEGVKFVPIKVSDCKIPAI
                     LTDVYYIDLFSQGLDNTIEQMRSVISGSSRYTPLPDIENLQVSIKYISTNEVEFKIFT
                     THFVESDASFGFVCKNPIDSYEVRPLTETIYRSMQGETYKKLSDGREKAFKMQIGILQ
                     RSITPSQPFIGRLVSKQLPLQLEGILHIKSFEPVNFRELKINIEQ"
     gene            12537..12986
                     /locus_tag="U1041_001437"
     CDS             12537..12986
                     /locus_tag="U1041_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEM4768545.1"
                     /translation="MELKDIMHILEDMKVGVFATLDEYGNPHARHAHITAANEEGIFF
                     MTSPETHFYDQLMGDQRVAMTAISEEGYLIQVVRVEGTARPVENDYLKTVFADNPYYQ
                     HIYKDESSDTMQVFQIYAGHGFYHSLTQGHKYIFSIGQGENSEVRTL"
     gene            13077..13424
                     /locus_tag="U1041_001438"
     CDS             13077..13424
                     /locus_tag="U1041_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF59 domain-containing protein"
                     /protein_id="HEM4768546.1"
                     /translation="MREDIQINERALVLSEQLVEVLESIYDPEIELDIYNLGLVYEIN
                     IDEVGFCKVIMTFTDSGCSCADTMPGELITALKTIDGIEDAQVEIVWSPAWKMTRISR
                     LGRITLGISPKRK"
     gene            complement(13440..13826)
                     /locus_tag="U1041_001439"
     CDS             complement(13440..13826)
                     /locus_tag="U1041_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768547.1"
                     /translation="MKLNVELSRFRVKEGKTVQVDEWMAFLNEHMEDTLLTLEGEKMY
                     VETIFREVLDGREYLYWYSVQAEGGIEVEDSESYIDKKHLEYWEECIDPNYDMVDLDP
                     QVIMIPKPIYETMEKLDKRYDETYKK"
     gene            complement(13840..>15036)
                     /locus_tag="U1041_001440"
     CDS             complement(13840..>15036)
                     /locus_tag="U1041_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 8"
                     /protein_id="HEM4768548.1"
                     /translation="AVVLAGDYGYIRQIETTLKSLIFHNSHLKIYIFNQDIPKEWFIH
                     YKSLLNQIGSDLIDIKLLDVPLNRDWYAGFSHITYMAFARYFIPQFVSEDKVLYLDSD
                     IIITDSLDNLFTIDISQHYLAVVRATFGYGLGFNSGMMLINNKRWKAENITTKLVEKT
                     EQEKDSIQEGDQTILNLVLGHEAIWLDDTYNFQIGFDQGAFSYRHQHLFELSLDPLPK
                     ILHYISGDKPWNTYSSGRLREVWWHYHFLAWTDILKKWENIQTMIPKKHCKGKLLIIT
                     NTHWLQNIEYLVKQLPDYEFHITAFTDVANNLKQLSSQENVFIYPHIIAYVLVDMIKN
                     CDIYLDINHGSKLDELLEHVIVNQKPVLSFDNIAAPIFENYSHRQVFSYHLPENFVTA
                     VRLLSE"
BASE COUNT         5073 a         2279 c         3022 g         4662 t
ORIGIN      
        1 ggtctgtact gaaatcaagg tattattggg aatcccagct taaatcatag atgccgtaag
       61 ggattttatt ctttatttaa aactttgcaa cagaaccatt agagttaact agtataaaaa
      121 gaaagaggtc aatcaaattg aaagttggtg acaattttga attaaagatt ttgcattttc
      181 ttttgtaaaa tcaaagtaaa aaccacctca aatgaagtgg ttgactagtc tattttatgg
      241 tgttaattgg tgtcaatttt atccaaatca gtggatttta gtccattttc atggaagttt
      301 catttttgta aatgttgata taacgggatt tgtaagggtt aagaattctt tgttttcaat
      361 agcgaaattc tcaaaacgtt aattatcagc gatatatcga cgtttcaaag cactcgcagg
      421 gttttcccta cgggtgcttt tttcgtgtaa tttttgaaaa gtattttttc aaaaatcgta
      481 taccaatttt atttggggtt ttctttggat aaggcgctaa tgaaatctag tagtgttcgt
      541 tggaaaatgg tataataggt ggagatataa acgttttcaa ggagtaggtt ttggaagaga
      601 gcttaattaa atcaaaacaa cgtgttcaaa aacatggaga agtctttaca cctgcttgga
      661 tggttcagaa aatgctggat actcctggag tgaaagaagc ttgtgaaagt gtatataaga
      721 cctttttaga gccatctgca ggcgatggaa attttttgca agcaatttta gagagaaagc
      781 tagaggctgt ggtcagacag tatgacaaac gaaattggaa aacaaagtct ttagttgctc
      841 tctcgtccat ctatggcata gagtttttag aagataattt ggaagtggca cgttcacgga
      901 tgtttctttg ttatttagac tggtacgagc aagcttttgg aactagacta aatagcaaaa
      961 atgatatcta tcaatcagca cactatctta ttcataaaaa tattgtgaga ggaaatactt
     1021 tgactcagca gcatccagtt acaggggagc ctatcaggtt caatgagtgg caactggtca
     1081 aaggtcatcc aagtttggta agaaaaattc cttttgcact ttcagaactt ttgggtaagg
     1141 aagtagaaga cgatcggaca gtcgtggaag gacaactgag tttttttgat atagatgatg
     1201 aatttatgat tgagaatgaa tctgttaaaa aagcagatac gataaaagag ataaccattc
     1261 aaaaagtgta tttactagga gattaggcta tgatttcaaa ttttgatttt ttggcaattg
     1321 atatagatac agccgagctt tttagaacta taaatatggc tgaagaaaat tatacgcacg
     1381 gggattatga aggcacgcta acaaaagtga ggaaagttgc tgaaaataca gcaaggttgg
     1441 ttgctgatag agaataccta gatattcgtg aacgtgcgac ttttaacgat gtgctaagtg
     1501 agataaaagg ccttattgat aataagacta ttattgatca tttctatgat atcaaaggaa
     1561 aggggaataa ttctgcacat gtcctcaatc cagaagatgc gacgaaagaa aatgctttaa
     1621 aatcgttgaa acaagtcttt gaaatcctag cttgggtcat gctgacctat attgaaccgg
     1681 atattaaagc cagtgcaatt ggtcattttt tagaaccgag agcacaagaa atgtacacta
     1741 cggctgagcg gaagtttatc tatattcaaa cagttaacaa tgaaagtgga ctatttaatg
     1801 ccttcgaagg gactcaaaaa attggtgagg gtagcatttc ttcggatgat attgagacag
     1861 attggtcgcc aaatagtgac tttttacgta ctgttgcccc aaaacgtatt aatcaataca
     1921 tgaaaacatc tggtctgcct tacacgcttg gttgggtaga gcttgcttac aaaaaggcga
     1981 ccaagtcctg gtttcatgat tatgatgtgc ataatgtctt gaagcgttca gggattaaac
     2041 aggctgaaca actggaagga acagagtggt tcaagacgga tttagagaca gctaaggctg
     2101 ctattaaagc tgttaaagaa ggtagaaatt atctaaatat tactgctaaa gaatcattta
     2161 ttgaagaacc agttatcacc cttcgtccag aacaagaggc agcggtcgag cagacgcaaa
     2221 aagtctttaa gaaaaaagac cgaatgctct ggaatgctaa aatgcgtttt ggtaaaacct
     2281 tgacgtcctt gcaattggtc aagaatgaag cctttcaaag agtactcatc atgactcatc
     2341 gtcctgttgt ggcggattct tggtttgatg atttcaagaa aatgaagatg agcgctgatg
     2401 ggtatgatta tggctcagtc aatcaaggag aaacgcttga aaacctgaag cgaggtgaga
     2461 aaccttttgt gtatttcgct tcaatccaat tgcttcggta caatggcgga caaaccaatc
     2521 tgaaagattt tgcagatgtg gattgggatt tgatcatcat tgatgaagcg catgagggga
     2581 ctcagacaga gcttagtgat tcggtaatga aagaattggt caaagagcat acaaagatac
     2641 ttgaactatc ggggacacct ttcaatcttt tggatcaatt tgacgaggag caagtctata
     2701 cttgggacta tgtcatggaa caacaggcta agaagaagtg ggaattagaa cgtccaagtg
     2761 agccaaatcc ttatgaaact ttgccaaaag tatcgatgta cacttttgaa atgaagcata
     2821 aggaacgttt ttctgatgag agtaaatcgt tcaactttag ggaatttttc cgtgtggctg
     2881 aggatggtca acttgtttat aagcaagagg ttcgccaatt cttagataat atcacacatc
     2941 cagatagtcg tacgaactac cctttttcaa cgaagtctta tcgtgaagag ttgcgtcata
     3001 cgctttggct tatgccaggt gttaaagaag ctaatgcttt tgaggacttg cttaaagaac
     3061 accctatttt cgggaaagaa tataaaattg ttaacgttgt tcgaggagca agtagcgatg
     3121 atggaattgc taacgatgcg gacatagaga aagttcgttc tgctattggt aaagaccctt
     3181 cgcagacaaa aaccattacc ttgacggttc gtaaactaac tacaggtgtc aatatcccag
     3241 agtggacagc cgtcttgttt ttgtcaaata ccaatagtgc catgaactac ctacaagctg
     3301 cctttcgtgc ccagacgcct ttttctcatg agaaattggg aatgaagaca aattgttatg
     3361 tctttgattt tgcccctgat agagccttga ctgtcatggc ggagagtgcc cagattaact
     3421 caggtgtagg gaagaaaaat acgcaagcac aaaagcaagc tatggctcgt cttctaaact
     3481 ttatgccaat cttaggggct tcagacaatg gaatgaagac ctacgatgtg gatagaatgc
     3541 tgacacagct caagaaagtt tatgctgaaa aggcagtgcg gtcaggtttt gaagacgaca
     3601 gtctatataa tgacaatctt ttaactttaa ctgctgatga tgcaagcatg tttaccaaac
     3661 tcaatgctat cgttggtaag acacagagtc aaaaaacgcc taagaaagtt gtaatcaatg
     3721 aaaatggatt gacaactgaa gagcatgagc aagctgaaaa agctaaaaag aaaccaaaag
     3781 ctaaacgaac agcagaagat ctagaggtta tcgaaaagca aaaagaagct aagaaacagc
     3841 ggaaaaatat gatttctatt ttacgcgggg tttctatccg tattccgatg atgatttacg
     3901 gcatggcggt cgatttatca aaagatatca ccattcaaga ctttatcaag caggtggatg
     3961 atgaatcgtg gaaagagttc atgccaaaag gtttcaccaa gggaatgttt agtgagatta
     4021 ccaagtatta tgatgctgag gtctttatcg aagcaggtcg tatcattcgt cagcgtgcca
     4081 aatcctttga tgatctggac ttcatcgagc gggcggagca gattgcagag ctgtttggga
     4141 cctttaaaaa tcctgataag gaaacggtac tgacaccatg gcgcgtggtc aatctccaag
     4201 tatctaagtc tgtcggtggt ttgaacttct atgatgataa ctttgagtcg gtgacagatg
     4261 gtgcgacgtc aaatcttcac tgggtgtcta atgaagtgac tccatcaatc tatcaacgag
     4321 atacgaaaat cttagacatt aactcgaaga caggtctcta ccctcttcat agcgccatta
     4381 gcttgtatta tcaaagagtg gcagaaaatg atgacaacca ttttgaagct gaccaagtct
     4441 atcaagagat tttagcgaat aatatctacg ctattgccaa aacaccaatg gcaaaaacca
     4501 ttactgaacg tacactgaca ggctatcgga agtacaaaac caatgtgact tatatagaaa
     4561 gcctgacaaa taccctaaaa acagatagtg aacaaggtaa gaaactagtt gaggaggcat
     4621 ttaacaaggt gaaatttgat gtagtgatag gaaatcctcc gtatcaggaa gaaacgaaag
     4681 gaacaagtga taatcctatt tatcataatt ttattgactt atcttatcaa atagcagaaa
     4741 aggtctgctt gattactcct gctcgtttcc tatttaatgc aggaaagact ccaaaagtat
     4801 ggaatcaaaa aatgttgact gatgaacatc ttaaagtgat ttacttctct caaaagtcag
     4861 atgaagtctt tccaaataca gacatcaagg gtggtgtagc agttacttac cgagattcaa
     4921 acgaagattt cggtgcgatt gaaacattta ctccatttga tgaattaaat gaaatgtata
     4981 gattagttac ccatcataaa gatttttcat ctttaagtga attggtatat gcacctgaaa
     5041 gttacaaact gacaagccaa ttacatgaag aatttccaca attggaatct cgattgagta
     5101 aggggcataa atttgatgtc acaacaaata tttttgagaa acttcctgaa attttcaaag
     5161 atatcaagtc ggattcaact tatgtagaaa taattggacg tcaaaataat gagcgagtaa
     5221 ataagtttgt gagagccgat tatataaagg ggcctgataa ctttgagaag tataaagtct
     5281 ttcttccgaa agcaaacgga agtggggcga taggcgaagt tctatcgacc ccactcgtgg
     5341 gtaccccact cgtgggtacc ccactcgtgg gtcacacaca gacgttttta tctattggct
     5401 catttaatac tgagtacgaa gctcattcat tattgaagta cataaaaacc ccttttgcta
     5461 gaacgttgtt aggtatttta aaaatcactc aagataacaa gaaatcagtt tggaaatatg
     5521 ttccagtgca aaatttcact aataaatctg atgttccatg ggataagtca attgatgaaa
     5581 ttcatgatta tctgtgcagt aaatatcatt acgaagaaag ccatcgaaaa tttatggatt
     5641 cttatattag taaaatggat tagaaattgc gtctaactcg gacattgatt ggttacaatc
     5701 aatagctgag ttagacgcac aactctatcg aaaatatgga ctttcggatg atgagattga
     5761 atttattgaa agtaaagtga aggagatgga ggaatgacat tgatgggcag aggtgtagat
     5821 gacagaattt aaattcaata aattaacgcc attaagcaac gttaacatcg acccatcgca
     5881 tgatgcagcg atgaaatatg cgttagaaga taaaggtatt aaaaatgtag caatatctgg
     5941 gaattatggt tcaggtaaaa gtagtttcat agaaacttat aagagtaaaa atagcaactt
     6001 taaaccatta catatctcgc tggctcactt tttttctcat aataattttg aaaatgaaaa
     6061 aaacgctcac tcagatatga ctcaagacca aactgaaaag agggatgtaa aggaacaaat
     6121 taatatcatt gaaggaaaaa taatcaatca attgttgcat cagattgatt cgaaatatat
     6181 tccaatgacc atttttaagt ccaagaaaaa cccagaatta tctgaaattc ttaaattatc
     6241 tactgcattc ctactattct tattgccgat tatgtttcta tggaattata ctcaattagc
     6301 gattttagtt agagaattat tcccagattt tcctcatatt ggaaagtctg ttcgtattgt
     6361 agcttatcta attttgatga gtaatcttgt ttttacggta tacagactat ctgcattaca
     6421 gttaaaaaga cgattaataa agactatttc gtttcgtggg gcaaatatct ctggagatgt
     6481 tgaagtgttc caaaatgaag atgattcata ttttgataaa tacttagatg atgttttgta
     6541 tctttttgat aattgtcaaa gtgatgttat tatttttgag gatattgacc gatttgaaac
     6601 aaatcttatc tttgagaagt taagagaaat aaatacgctt gtcaacaata agagaaatgc
     6661 tgggaaaaaa cttctatttg tctatcttat caaagatgac atgttcattt cgcaagatag
     6721 aactaaattt tttgatttca ttattccgat tattccagtc attacctcat ccaactcagg
     6781 tgaaaaacta ggggaaatat taacaaattt aggtgaagca agcagtgtta gtaaatcatt
     6841 gttaaaacaa gtggcgattt acattgatga tatgagacta gcgtataata tctgtaatga
     6901 atttgttcta tataagaata atttatttag ccaagaggaa aatgataata ataagctaaa
     6961 tctttcatcg gataagattt ttgcaatcat tgtgtataaa aatatttttc ctaaagattt
     7021 ttcattactc caaaaagatt caggattcgt ttatcaacta tttagtagaa ttgatgattt
     7081 aaaacggatt agtctagata aaaaatcagc agaaattgag aaaatagaag aaaagataat
     7141 ttcttctgaa caagaatttt ctaggaataa acttgaactc tattcaacat atctaaaggt
     7201 tcctgaggga agggtagcta ttcgagtaaa tggtaaaact gagagtcaat ttcctcatag
     7261 gttggatttt atacgtgaga ttctatcgga aggtgctgaa attgaatcag ttaaagtaga
     7321 tgattattat tctcggttaa atggtcgaaa agaagaatta gaagatatat tcccgatgaa
     7381 tgatattagt tttcaagagc ggttgagtgc tttagacaat caaaattatc tcaatgagtt
     7441 aaattctaag ttagaaaaat tacgtgaaga gtatgaaagt gttaaatcag aaaagttgtc
     7501 tgttctcatt aatcgtaatt tttttgatat tgtaatggaa gaatatccct acctaaagag
     7561 agagaaaaac tctctaatca tgtatttatt gagaaatgcc tacatagatg agagttaccc
     7621 agactatatt acttattttt atcctaatag tttgaagaaa caagataagg agtttttaaa
     7681 tgcggttcaa ggagagatta aactcgactg ggactattct ttgaaagaag ttgcagaagt
     7741 caatgaaaga cttgataatt ctgattttat gagaatttat gccttaaatt ttgatttatt
     7801 tgaatatctt ttacagaaac aagataagaa aagattgaaa agttatttat cagaggctaa
     7861 tgtaaaattt gttaacaagt ttttacaaca aaactcacga catattacag caaaaatttc
     7921 tgcacttctc tacttaattg atttaaatca gaaaacgtta aaatcacttt tgacttctga
     7981 cgatatcctt gaaaaggaaa aactgcagat aattatttta ttgttgtcat ttattgactt
     8041 ttctgaagtc atctggcaag aagatttaca agaggtgatg tattcttttg taaatagtaa
     8101 ctggtcatat attcaagaaa ccgttgataa ctttaatgaa ctcatcaata atactcagat
     8161 tcaagataat ttgaagttta tggaggttaa aataaaagat tttaatttcg aagataaaca
     8221 taaagaaata agcgattttg tttatgacaa taatctttat gacgttaatg ttaaaaacgt
     8281 tcgaagttta tccttttatt tggatggtaa ttttaaagaa gacagtttga taaaacaacc
     8341 aattacgact gttagaaagt ttgataagct ctttagttat attgaaaaga atattgaccg
     8401 atttgtaaca gagtttatac cctatatgag cgataattta tgtgataagt ggctagatat
     8461 gtattattta cttaatcata acgaagtaac cagtgataat agaatagagt acttgaagag
     8521 agtccaaaat aatattttgg attttgaaca attggatgat gttataatca aggacgcagc
     8581 tattgcattc aataaagcaa gatttagtac gaaaaatatt ctagattact tctgtgaata
     8641 tcatagttgg aatgatcgat tgattgaatt tgtaaataac ggggagcact tggatttttt
     8701 acaaacagag ttcaagggat tttcagatga acttcaagaa gaattttttc aagaaacagt
     8761 taaatgcaat cagctggata atgataaata cagagagatt atttctaaat taggatggca
     8821 ttacactgaa tttgaattgg aaaatattgc agatgaaaaa atgtctattc taattgggac
     8881 aagatgtata tcggataaat tttcagtaga cacattgaat ttcctcagag ataattatca
     8941 aaatcatgtt attgaatatt tgatagaata tattgaggga taccttttag aaaatgaggg
     9001 tgatacggat gtttatcacg aaagtgaaat gataagtctt cttgatgaag tgctaactga
     9061 tgaagataaa tttaaagtta ttgataaatt tcctagtagc atatccctat cggataagaa
     9121 ctattctaca gcggtgattg actatatctt gcaaaataaa tttgatgaag aagatttgaa
     9181 attttttatc tctaattata aaattttatc gattagtacg aaatcaatat ttagaaaaat
     9241 atttgctgat tatatttctg agtttttaaa tgaaatcgat tcagttgata aaagtttgct
     9301 ctatgaagtc atcgaggata cagccataga tattgaacac cgtcgacttg tattggcgaa
     9361 ctatattgat gattttagtt atcctgaact tttaacttta ttgaatagtg tcagactaat
     9421 ggaaattatt acctctttaa cagataataa aaaaccgaaa gtagaaataa ccggctataa
     9481 tgaattgatt cttgaatacc ttaagacaaa caaaaaaatt gcctcctatc atcaagaagg
     9541 agatagctat agaatttata gtcggaaaca taggtaagga ggtgctttta tattgaaaga
     9601 taaggatgaa ttattttgta aactatccca ctaccaattc tcaccagaaa accaatacct
     9661 agatcgaaaa tcagccagaa agaaaccgtc tgaacttctc aaacacctga ttgcttttgc
     9721 caatgcggat ggcggtcaat tggttattgg tattgaggat gagaaacagg aaaatattat
     9781 cactggtttc aaggacggca gggcttatcc catagacgat ttcaaaaaga ttgatcgtga
     9841 gatgcgtgag actcctttgg atttatcttt tgaggaaatc cctgtaatca atcataaggg
     9901 tgaagaagat ttcattttag ttatctctgt ggaattgtca tcaaatcgtg tgattgcagc
     9961 accaaatgat gacgtttatc ttcgtcaagg agatgaatct gtcaagttga gttatgagca
    10021 acggactcaa ctcagttatg ataaaggaca acgcttcttt gaagatgagg tcgcccctga
    10081 tgccagtctg aaagatattg acgatagctt ggttcaggat tttaaaaatc gttttgatat
    10141 atcagagcgt tctgtggaag aaatccttaa agcacgtcga tttctaatca atgggaaatt
    10201 aaccaaggca gcaattttac tctttggcaa atatccgtca gcattcttcc ctcaagcgcg
    10261 tgttcgattt cagcgatttg atggtacaga tatgggaact ggaagtagtt ttaatgttat
    10321 caaggaagta acctttgatg atgctctgcc aagcctgatt atcaaggctc gtgattttat
    10381 tcgtactcag cttcgtgaat ttcagtattt ggatgacaat gggcaattcc aaattttgcc
    10441 tgagtatcct gaatttgcct ggtttgaagg tgttgtcaat gctgtaactc accgtgatta
    10501 ttctgtctat ggtgatcaca ttcgtgtgct tatgtttgat gatcgactag agattcatag
    10561 cccagggaaa ttacccaata tcgtcaccgt tgacaatatc aagcatgaac gattttcacg
    10621 aaaccctcgc attgccagaa ccttgacaga gttcggttgg gtacgtgaga tgaatgaagg
    10681 tgttaaacgt atctactcgg agatggaatc tgcttttcta catgaaccta aattctcaga
    10741 acctgggaat aaggttgtcc tgacgcttga gaacaacatt gtcagccgac atctccgtac
    10801 aagagacagc ttggaaaaac agttctctga ttttgataac ctaaactcag acgagcaggc
    10861 tattatccac tatatgtata attcaggcga gagaatgaca acggcaaaag ctgttgaatt
    10921 gactggtaga agcagacgtc atataggaaa agtgttgcaa aaattgacag atcaaggact
    10981 cttgaaatgg tatggcaata gtaaaaatga caaaaatcaa tactacactc ttgcttcaaa
    11041 atagatttca ttttatactg agaacgcagt agaacgcagt agaacgcagt agaacgcagt
    11101 agaacgcagt aggatacagt agaatacagt gttgctaggg caccaaatta ttcaatatgt
    11161 tggataattt tgattatagg tgaaaagtat ctagatgagg aatggaaaga ggaagagatg
    11221 atttttatta gttataatca cggagatcaa gatgtagtag atatgattgc taaacgatta
    11281 gagattgagt ttggacgaga taatattttc tacgataaat ggtctatgca accaggagat
    11341 agtattatag gcaaaatgga tgaagggctt gaaaaagtta caacattttt ttattttcta
    11401 tcatcaaata gcttgaatag caacatggtc aaaaaagaat ggcaagcggc tctaactaag
    11461 tctctctatg agggagttaa atttgtccca ataaaggttt ctgattgcaa gataccagct
    11521 attttaacag atgtatacta cattgattta tttagtcaag gattagataa tactattgaa
    11581 caaatgcgaa gtgtgataag tggcagttcg agatatacac ccttacctga tatagagaat
    11641 ttacaagttt ctattaaata tatatcaact aatgaggttg agtttaaaat ttttactaca
    11701 cattttgtgg aaagtgatgc atcttttggt tttgtttgca aaaatccaat tgactcatat
    11761 gaagttcgtc ccttaacaga aacgatatac cggagtatgc aaggggaaac atataagaaa
    11821 ttaagtgatg gtagagagaa agcatttaaa atgcaaattg gaattctgca gcgttctatt
    11881 acgccaagtc aaccttttat aggcaggttg gtctctaagc aattaccatt acagctagaa
    11941 ggtattttgc atataaagtc atttgaaccg gtaaatttta gggaattaaa gataaatatt
    12001 gagcagtgat tagtatttaa aataactcga atcagggaat aaaaaaacaa gtcattctat
    12061 gacgacttgc ttatccattt ctcaactata taagctccga aaacgagttt ttggtaatct
    12121 atttgaaagt ttgctttaat aggcttttat tgagatttta cttttggaac ccaaaaccag
    12181 gtcttaagaa agcacgtaaa gcaagtcaat ttagtaaacg ttaatatacc gcgatatatc
    12241 aacggttcaa agcactcaag agtcgctttt ttataattag gtagttttta tagttacaac
    12301 ggattttgat tgatgtcata atcggttcag agtcaaatct ataccaattg gaaatcaaaa
    12361 gggttgagga acctttgaag gttgaaaatg aagcaaacat agctaccttc tttaatggtt
    12421 ctgtcagtag ggagttgttc atgaaacact ttcaccattt ctatcaatat cccacttaac
    12481 attttcgctt gtttttgata tactttagaa aataggtgtt ttcaaggggt gataccatgg
    12541 aactaaaaga tattatgcat attttggaag atatgaaggt tggagttttt gcaactctgg
    12601 atgagtatgg aaatccacat gctcgtcatg ctcatatcac tgcagcaaac gaagaaggga
    12661 ttttctttat gacaagccca gaaacgcatt tctatgatca attgatgggg gatcaaagag
    12721 ttgcgatgac ggctatttct gaggaagggt accttatcca ggtagtgcgt gtagaaggga
    12781 ctgccagacc tgtggagaac gactatctaa agacagtttt tgcggataat ccttattatc
    12841 aacatatcta taaagatgag tctagtgata caatgcaagt atttcagatt tatgctggtc
    12901 atggcttcta tcatagcttg actcaaggtc ataagtatat cttttctatt ggtcaaggtg
    12961 agaattcaga ggttcgtaca ctttgaaaac tagatgaaaa catctgataa gacaagtata
    13021 tttcaaataa ttatgataca atacttttta taaatgtttt aggagtgttt ggataaatga
    13081 gagaagatat tcagatcaat gagcgagccc ttgttttgtc agaacagttg gtagaggttt
    13141 tggaatctat ttacgatccg gaaattgaat tggatattta taatttgggc ttggtctacg
    13201 agataaatat tgatgaagtt ggcttttgta aggtcattat gacctttaca gactcaggtt
    13261 gctcttgtgc cgataccatg ccaggagagc ttattacagc cttgaagacc attgatggca
    13321 ttgaagatgc tcaagttgaa attgtctggt ctcctgcttg gaaaatgaca cgcatcagcc
    13381 gtctaggacg gattacattg ggtattagtc cgaaaagaaa atgagttgta ctgagcaact
    13441 cattttttat atgtttcgtc ataacgttta tcaagttttt ccatggtttc ataaattggt
    13501 tttggaatca tgataacttg tggatccaaa tcgaccatat catagtttgg atcgatgcac
    13561 tcctcccaat attccaaatg ttttttgtcg atataggatt ctgaatcttc gacttcaatt
    13621 cctccttcgg cttggacaga gtaccaatag aggtattcgc gtccgtccaa tacctcgcgg
    13681 aagatggttt cgacatacat tttctctcct tcaagagtga gaagggtgtc ttccatgtgc
    13741 tcgttgagaa aggccatcca ttcatctact tgaacggttt tgccttcttt aacacgaaag
    13801 cgggagagtt cgacgtttag tttcattttt tctccttttt tactcgctaa gtaatcgcac
    13861 tgcagtaaca aagttttcgg gaaggtgata ggagaagact tgtctgtgtg aataattctc
    13921 aaaaattggt gctgcgatat tgtcaaaaga gagaacgggc ttttgattta caatgacatg
    13981 ctctagcaat tcatctaatt tactcccatg gttaatatca agatagatat cgcaattttt
    14041 tatcatatct actaagacat aagcgatgat atgtggatag atgaagacat tttcttggct
    14101 acttagttgt tttaaattat tcgcgacatc tgtaaaagct gtgatatgga attcataatc
    14161 aggaagctgt ttaacaaggt attcaatatt ttgcaaccaa tgagtattgg tgattatgag
    14221 taattttccc ttgcagtgtt ttttaggaat cattgtttga atattttccc attttttcag
    14281 gatgtctgtc caagctagga agtgatagtg ccaccatacc tcacgaagac gtccagaaga
    14341 ataagtattc caaggtttat ctccagagat atagtgcaga attttaggca aggggtctaa
    14401 gctgagttca aatagatgct gatggcgata ggaaaaggct ccttgatcaa atccgatttg
    14461 aaaattatag gtatcatcta accaaattgc ttcgtgacct aaaaccaagt ttaaaatagt
    14521 ttggtcacct tcttgaatgg aatccttttc ctgttctgtt ttttcgacta atttagtagt
    14581 aatattttcg gctttccaac gtttgttgtt aatgagcatc ataccggaat taaaacctag
    14641 tccgtagcca aatgttgctc gaacgacagc tagatagtgt tggctaatgt caatagtgaa
    14701 taagttgtct agggaatcag taatgatgat gtcgctatct agatacaata ctttgtcctc
    14761 agagacaaat tgaggaataa aatatcgagc aaaggccatg tatgtaatat gtgaaaaacc
    14821 agcataccag tctctattta gagggacgtc taataatttt atatcgatta aatcgctacc
    14881 aatttgattt agtaacgatt tataatgaat aaaccattct ttagggatat cctgattaaa
    14941 aatataaatc ttaagatgac tattatgaaa aatcaaggat ttcaatgttg tttcgatttg
    15001 acggatataa ccatagtccc ccgctagaac tacagc
//
LOCUS       DASFQS010000057        14514 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.058, whole genome shotgun sequence.
ACCESSION   DASFQS010000057 DASFQS010000000
VERSION     DASFQS010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 14514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14514
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.058"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(132..746)
                     /locus_tag="U1041_001441"
     CDS             complement(132..746)
                     /locus_tag="U1041_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEM4768549.1"
                     /translation="MTDQLQALLKDYQPQPLGEKRSYAVFLPLVWSDNQWQVLYEIRS
                     ESISQPGEVSFPGGGIDEGETAEEAAIREVIEELDIQQEQIELLGEIDYLVFGRSTIR
                     CFVGRLHLDWQTLQPNDEVARFFTVPLETLLKTSPVYYQLDSQIVPDCDFPFERLRGG
                     VDYPFSHHKRSVPFYENLPENIWGMTAQFTHRFTEIINQKTSPR"
     gene            complement(876..1034)
                     /locus_tag="U1041_001442"
                     /pseudo
     CDS             complement(876..1034)
                     /locus_tag="U1041_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921851.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 family protein"
     gene            complement(1166..2011)
                     /locus_tag="U1041_001443"
     CDS             complement(1166..2011)
                     /locus_tag="U1041_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM4768550.1"
                     /translation="MDVTWTVKYITEFLATALLIIIGNGTVANVDLKGTKGNNSGWIL
                     IAIGYGLAVMMPALMFGNVSGNHINPAFTLGLAVSGLFPWAHVAQYIVAQLLGAMFGQ
                     LVVVAVYKPYFLKTENPNHILGSFSTISALDNGTKESRKAATINGFLNEFAGSFVLFF
                     GALALTKNFFGAELVGKIIEQGYDKTVAETMTAPYTSGSIAVAHLGIGFLVMALVACV
                     GGPTGPALNPARDLGPRLLHHFLPKTVLGESKSDSKWWYAWVPVVAPIIASIAAVALF
                     KFLYL"
     gene            2151..2951
                     /locus_tag="U1041_001444"
     CDS             2151..2951
                     /locus_tag="U1041_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEM4768551.1"
                     /translation="MGANQETLMYALEKSIQKKADLFEHSFSAYAVRSILASLYLGLG
                     IVISLYTADKLNHVAEGLGKFSYGLMFGWGLLMILYMNAELGTSNMMYMTVASHRKTI
                     PTKTALKMLATCILFNFVGAVLVCYLVSLTLPYQHVDAHSYLFEATVAKLSKTPLTQF
                     IEGIFANIVVNIGVFTFLRIKDDAGRLISVIFIIFIFAFLGYEHVIANFSLFSLAFFA
                     NGGPVEGMTLLSVLSNFLFSGLGNYVGGGLFIGLLYSWLNHQSKLYVD"
     gene            complement(2985..3680)
                     /locus_tag="U1041_001445"
     CDS             complement(2985..3680)
                     /locus_tag="U1041_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002919316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEM4768552.1"
                     /translation="MTELFSNPIFGIMLSIAAYLIGMLIYRRFPHPITTPLLVATGLI
                     IVFLKMTGISYKEYYAGGSYLNMLIVPSTVALGIPLYRSFHLMKHHIRSILLGIFVAC
                     IVNTVFTALIAKWFGMDFFLAISLFPKSVTTAMAVGITDKMQGIATITLVVVVATGIL
                     TSVLGPVFLKLLKIEDPVAVGLALGGTGHAIGTGTAIKYGHTQGAMAGLAIGITGIMY
                     VVISPIVAQIILQ"
     gene            complement(3673..4053)
                     /locus_tag="U1041_001446"
     CDS             complement(3673..4053)
                     /locus_tag="U1041_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEM4768553.1"
                     /translation="MKLYVQFMIILVFSFLGEAISTIFHLPIPGSIIGLILLFLALEF
                     KLIRLRHIQTVGNFLLANMTILFLPAAVGIMERFDAIKDYLLPIIIVILGAIFLNILV
                     IGFVVQFVKQKFEGDYIDTEGIHD"
     gene            4347..4673
                     /locus_tag="U1041_001447"
     CDS             4347..4673
                     /locus_tag="U1041_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4768554.1"
                     /translation="MHFPVPAVLTEFLIMAILESDDSYGYEICQTIKLIANIKESALY
                     PILKRLEQNDFLTTYSQEYQGRMRKYYSLTQLGHEELVRLKDDWDTYTNTINGIIEGS
                     VRHDKN"
     gene            4660..5415
                     /locus_tag="U1041_001448"
     CDS             4660..5415
                     /locus_tag="U1041_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HEM4768555.1"
                     /translation="MTRTEYMEQLEKYLKKLPHKEYFEAISFFNEYFDEAGPERETEI
                     IEELGSPKEAASELINNMLNKQIQEEKDQQEPIQLNWKLWVGLGVLSMTGLFSFFLLF
                     IMGEFIGVIPLFATLILGAFFLGRYFRNFSQTKRTLWLAILAVISLPIAIPLLLILLA
                     SLLGLVALILALIVGAFVLGVGLLTSGGYLIWEAFSLMSEGFNIFLMGFGSGLSLIGG
                     AILIYILTGFFAYWSWRLVKACFKWILKRGKRA"
     gene            5412..6470
                     /locus_tag="U1041_001449"
     CDS             5412..6470
                     /locus_tag="U1041_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM4768556.1"
                     /translation="MKKKLTIAIIIGFVSLIAGLILAGIGFFTGGVTRLEEVAAPTEV
                     HKTFTDLNTIKIDFIPHSVYIKESSDNNYHVTYANSDNNIQNPLKLSEKDGVLTLSAQ
                     ELEFAIEGIMQYLGESLAQRRINVFSVTIEVPKGKTLDKLEGHNLHFYDFGGFTIENI
                     HIKEANLSGGVTIDKVTIDSGQIEAGYVQATQSTLKDMHINLQGSRVRLYETSLENVT
                     IEGYSQLDSKQVTLLDDNRFTPSDTYSSTTFLDVTDKSLADSNLLITNQIDKKKLVEA
                     QGYYYEDGNDLGEMVNQDPYLQERLGEIGIFTSDKYTKFPVKTENDLQTLTLENKDSQ
                     NKLTIEATNATINLGTPK"
     gene            complement(6513..7721)
                     /locus_tag="U1041_001450"
     CDS             complement(6513..7721)
                     /locus_tag="U1041_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768557.1"
                     /translation="MNSLFLVAKETYLRQVKSWSFVFMVFAPFIMIFFSLGIGYLTGS
                     SMDQGGQEIALISQEASVQSAFEDLDGLTSDYTDEEAAKKALEDEDLLGYLIVTVSDG
                     QLSAVYHGNELPSIETETAIQQTLAELQDQLNKEDAQLTSQQEATLARTPAYQVQLVE
                     NKGYEKIGKFILFFALIFLLYVLTMIYASTTAQEVASEKGTKIMEVIFSSVPASTYFY
                     GRILGIFMVIATHLGIYALGGVGSYQFASLALLTMQDNPIAQAVLGGFDWFILFFSLF
                     GLVLIVVIAALCGSLVVRQEDVNKAVQPVMYPIIIGFIGAMTLGQQAQESILLKIGSY
                     VPLLSTFFMPIRIINGWANGLEAGLSLLMLIASTVAAIYFIGKSYAGLILQTDDIGLW
                     KSLKKGLSSK"
     gene            complement(7718..8611)
                     /locus_tag="U1041_001451"
     CDS             complement(7718..8611)
                     /locus_tag="U1041_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768558.1"
                     /translation="MLEVRHLCKSYGSKEVLKDISFTIPSGTICGLVGKNGAGKTTFF
                     HSLLRFVTYEGEIILDQQAVTPALFQKIGYLPEERSLMPKLSVFEQVRYLASLKGMTS
                     KEVAEKLPVWMERLQVKGKMNDKIKSLSKGNQQKIQLIVTLIHQPSLIILDEPFSGLD
                     PVNTDLLKRVILEEKERGATLIFSDHVMTNVEELCDQLLMIQDGQLVLNGGIQEIRRQ
                     FGRTRLFISSDVARERLEGLPHVLSVQMTNQDKWRLVLDDEAAGPELFQLISGGSYLA
                     TFDQQAPTIDEIFKIKSGVAE"
     gene            complement(8736..11195)
                     /locus_tag="U1041_001452"
     CDS             complement(8736..11195)
                     /locus_tag="U1041_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HEM4768559.1"
                     /translation="MLQKVKNIFKKPMTLVTIIGIACVPALYNISFLTSMWDPYGRLD
                     QLPVAVVNQDQSASFQDKTLTIGDDMVDNMKESKSLDFHFVSEKDAEKGLEEGDYYMV
                     ITLPEDLSEKASSLLTNQPEPITISYQTSKGHSFVASKMGESAMEKLKTSVSETITKT
                     YTTAVFDSMREIQTGMVEAADGSQQLTDGASQLESGSQTLSNGLTTLTTSGQALVTGA
                     NQLATGVVSYTDGVNQAAIGIQTLSSGLTTYTNGVANLASGAEQLNANSSQLIAGVGQ
                     LQSGANQVEQLVTGANQLQAGLEQLASSTSLSAEQSSQIQALLTGLPQLQAAISQLND
                     SLSSIGGLAVDTSTLSSHLTEMGAQAQGLLTAAQADKTTSIEALQATATYQNLTADQQ
                     AELVGALQNSPSTTMTAAQTILGQLSQLSQALSSLQSLSGMATQMSQLQSAVGQINTA
                     ANQALPGATTAIENLSSGLSQVNTALNQQVLPGTQALTSGVGQLQMQLSGGASQLMSG
                     VTAYTAGVAQLAEGGAQLVANNSSIQSGGSQLTSGLATLAANSSQLVSGSGQLASGSQ
                     QLIAGADQLASGGQTLTSGISSLRTGSETLTNSLSSASQQLSVVSVEDKNAQAVSQPV
                     TLEHSDQDDVKTNGVGMAPYMVSVALMVAALSANVIFVKHIDNRSYKNRWDWAKGKLL
                     LNGTIASLAAVILYGVLRLIGIDPAHPMATLGLILLASWTFMALVTALVGWNNRFGSF
                     ASLILLLLQLGSSAGTYPIELSPRFFQVIQPYLPMTYSVSGLRQTISMVGNSSHQVWM
                     LSLFLVGFIGLGLMMYRPTED"
     gene            11321..11854
                     /locus_tag="U1041_001453"
     CDS             11321..11854
                     /locus_tag="U1041_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4768560.1"
                     /translation="MGTDNRKERTRQAILEAMVTCLESQGFNDITTTHLAQTAGISRS
                     SFYTHYKDKYELIDSYQQGLFHKLEAIFDRYDGNRQSLFLEIFDLLYREKLLSALLTH
                     NGTQEIQNFLINKVRLLVANDLAERLGKENLSQLEKEYRSIYFSHAFFGIMQVWIKNG
                     KQESPQFMTDFLIKMLP"
     gene            11938..12921
                     /locus_tag="U1041_001454"
     CDS             11938..12921
                     /locus_tag="U1041_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4768561.1"
                     /translation="MIQAEHLSKTYSIIDKEVGLKGSIKAFFKPKKKKIPAVQDISLQ
                     VRKGEIIGYIGSNGSGKSTTIKMLTGVLYPDQGSVRINGLNPQENRKAVNKQIGVLFG
                     QKSHLDWNLPVQESFILHAKIYDVPDKVFKERLAVLIDLLDLADIMKQPIRNLSLGQR
                     VRCEFAAIFIHQPAVVFLDEPTIGLDASVKETIRSFIRYMNQQYQTTFLITSHDMKDI
                     ESLCERIFIIDKGKKVYDGSLTVLKERFSTVKTILFSTEKPIEKDLQLEGWKFERIDD
                     FHFEIHYQSKLWTSAQVIEQVFNHYAIEDVTMKELEIETMVRQIYEEGIHA"
     gene            12914..13693
                     /locus_tag="U1041_001455"
     CDS             12914..13693
                     /locus_tag="U1041_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4768562.1"
                     /translation="MRKYLYMTRLTMMNAMQYKAFFLATFVSLAVKILVALYVWKTIF
                     FTQSEVNGFTLQTFTTYIIFANLLASLNSFSLGEDLSYSILKGSIAGEFLRPYSFILA
                     LFFKDLGNKLLELIKFAIVFIGILLVHQDFYLPDGQTILLFLVSSILGMFIVQLLDMA
                     FGFLAFFTVNAWGVMLLRMGLFNLASGALLPLSFYPQAVENFLKLLPYNYAVNVPVSI
                     LLGQESDLTALGLQVIWIPILACFIALLWSQAKRRIVIFGG"
     gene            13695..14477
                     /locus_tag="U1041_001456"
     CDS             13695..14477
                     /locus_tag="U1041_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4768563.1"
                     /translation="MKKYISLYLYNIKVYMMAQMSFRVDFFIGLFSSLIEQIVYLIFL
                     NILFGNIKEIAGFNYGQMLFIYGIATVGRSIHLIFFDNLWMFGSRYIRQGEFERLLLM
                     PVNPLFQLICERIQPQGIGTTLIGSLALVQASKELGMEWNLGKLALLIFIAICIGLLY
                     ATIQLGPTALAFWIVESFPLTMGIFSLNQMAQYPLNIYPKLIQILLIFVFPYAFTAYF
                     PALYFLDLSMWGLALPLVVVVLFSINYKLFRYGMTKFTSVGN"
BASE COUNT         4243 a         3229 c         2915 g         4127 t
ORIGIN      
        1 tagattcatc aacatttttt atacttctat tttccacatt ggctaataca taatcccctc
       61 taaaattttt atgaacaaaa agggcaacgg aaaaattgca ggtcttgtta ttggcttgac
      121 tttaacttcg ctcatctggg cgaagttttt tgatttatga tttccgtaaa ccgatgggta
      181 aattgggcgg tcattcccca gatattttct ggtagatttt cataaaatgg gacggagcgt
      241 ttgtgatgac tgaaaggata gtcaacccca cctctcaaac gttcaaaggg aaagtcacaa
      301 tctgggacaa tctgtgaatc cagttgataa tagacagggg acgttttcaa caaggtttct
      361 agtgggactg taaagaatcg agctacttca tcattgggtt gaagggtctg ccagtccaag
      421 tgaaggcgac cgacaaaaca gcgaatcgtc gagcgtccaa aaactagata atcgatttct
      481 cccagcaact caatttgttc ctgttgaata tcaagttctt cgataacctc acgaatggca
      541 gcttcttctg ctgtctcacc ttcatcaatc ccgccacctg gaaaggaaac ttctcccggt
      601 tgagaaatgg actcgctccg aatctcatat aggacctgcc actgattgtc tgaccatact
      661 agaggtaaaa aaactgcata agaacgtttt tcacccaatg gttggggctg atagtctttc
      721 aataatgcct gcaattgatc agtcatagca actccttact aactagtgat ttatatttat
      781 tttaacgaat tttgtggcat ctggcaagaa ctttgtctag atatagccga acgaatttgc
      841 tttcataccc ggaaccgagg tacagacagt ataagaatag ggattcccgc atcactcaac
      901 tgctctgcca agacctttaa ggtcactgtc ttccctgtac ctgtcgcacc tgcgatgatt
      961 ccatggcgat tgagccgctt gagctgcatc tccgctcgac tgcttccata accaaaagca
     1021 ataacatctg acatattcta gcctcttttc cgattttttc tagctttact gtagcataac
     1081 ttttaggaaa atagcagagc agacaaccga atcacctcaa tatccataaa acaaaaaaga
     1141 aaaacccgac gaatcgggtt cgctattaaa gatacaagaa tttgaatagt gcaacggcgg
     1201 caattgatgc gataattgga gcaaccactg gcacccaagc ataccaccat tttgaatcag
     1261 attttgattc accaagtact gtttttggca ggaagtggtg aagaagacgc ggaccaaggt
     1321 cacgagcagg gttaagagct ggaccagttg gaccaccgac acaggctacc aaggccataa
     1381 ctaggaaacc aatgcctaag tgagcaactg caattgaacc tgaagtatat ggagcagtca
     1441 ttgtctcagc gactgtttta tcatagcctt gttcaatgat tttaccaaca agctctgcac
     1501 caaagaaatt cttagtcaaa gcaagtgctc cgaagaacaa tacaaatgaa ccagcgaact
     1561 catttaagaa gccattaata gttgcagctt tacgactttc ttttgtacca ttgtcaagcg
     1621 cgctgattgt tgagaacgaa ccaaggatgt gatttggatt ttcagttttc aagaagtaag
     1681 gtttgtatac tgctacaacc actaactgac caaacattgc acctaacaat tgcgcaacaa
     1741 tgtattgagc aacgtgagcc caagggaaga gacctgaaac agccaaacca agtgtgaagg
     1801 ctgggttgat atggttgcca gaaacgttac caaacatcaa tgctggcatc ataactgcca
     1861 aaccatagcc aatcgcaatg agaatccaac cagagttgtt tccttttgtg ccttttaaat
     1921 caacgtttgc aactgtacca ttaccaatga taataaggag tgcagtcgct aaaaattcag
     1981 tgatatattt cactgtccat gtaacatcca tatttttctt atatttcctt tcaaaagtta
     2041 aatttttttg gacaacaacc attttatcaa gtataataaa caaagtaaag ccattcgaca
     2101 aaaagaaaac gtttactcaa aaaagtagta aattcaataa ggagattagg atgggagcta
     2161 accaagagac attaatgtat gcacttgaaa agagtatcca gaaaaaagca gatttgtttg
     2221 aacacagttt ttctgcctac gctgtacgat cgatactagc cagtctttat ttaggattgg
     2281 ggattgtcat ttctctttat acagcagaca aacttaacca tgtcgcagaa ggactcggga
     2341 agtttagtta tgggttgatg tttggttggg ggctactcat gattttatat atgaatgccg
     2401 aacttggaac atccaacatg atgtatatga cagtagccag ccatcgaaaa acgattccta
     2461 cgaaaacagc cctcaagatg ttggcaacct gtatcctttt caattttgtc ggtgctgtcc
     2521 ttgtttgtta cttggtttca ttgacactgc cttatcagca cgttgatgct cacagctacc
     2581 tatttgaagc aacggtggcc aagctttcaa agacaccttt gactcaattt attgaaggaa
     2641 tttttgctaa tattgtcgtg aatatcggtg tatttacctt cttacgcatc aaagatgacg
     2701 ctgggcgtct catttccgtt attttcatca tctttatctt tgctttcttg ggatatgagc
     2761 acgtcattgc gaacttttca ctcttctccc tggccttttt tgcaaatggt ggaccagttg
     2821 agggaatgac tctattaagt gtactaagca atttcctctt ttctggatta ggaaactacg
     2881 tgggtggcgg tctctttatc ggacttcttt atagttggtt gaatcatcaa tccaaacttt
     2941 atgtagacta aaaaaactac ggttggaatt ccaatcgtag ttttttattg taagataatc
     3001 tgcgcaacta ttggactaat caccacatac ataatgcctg taatcccaat agccaagcca
     3061 gccatcgctc cttgcgtatg tccatatttt atcgctgtac ccgttccaat ggcatgtcct
     3121 gttcctccca aagcaagacc aacagctacc gggtcttcaa tttttagtag ttttaaaaag
     3181 actgggccaa gaacacttgt cagaatccct gttgcaacaa cgactacaag agtaatagtt
     3241 gctatccctt gcattttatc agtaatacca acagccatag cagtggtgac tgattttgga
     3301 aaaagagata ttgctagaaa aaaatccatc ccaaaccatt ttgcaattag ggcagtaaag
     3361 acagtattga caatacaggc aacaaaaatt cccaaaagaa tacttcgaat gtgatgtttc
     3421 attagatgga aagaacgata caaaggaata cccagagcta ctgttgaagg cacaataagc
     3481 atatttagat aggaccctcc tgcataatat tccttatagg aaatacctgt catttttaaa
     3541 aagacaataa tcaatcctgt agctaccaac agtggggttg tgattggatg aggaaatctc
     3601 cgatagatca gcattccaat taaatatgct gcaattgata acataatacc aaaaatagga
     3661 tttgaaaaaa gttcagtcat gaattccctc cgtatcaata tagtcgcctt caaacttttg
     3721 cttcacaaat tgaacaacaa aaccaattac taagatattt aaaaaaatgg cgcctaaaat
     3781 gactatgata ataggaagta aataatcttt aattgcatca aatctctcca taatacccac
     3841 tgctgcaggc aaaaaaagaa tggtcatgtt agccagcaaa aaatttccaa ccgtctgaat
     3901 atggcgaaga cgaatcaatt tgaactctag ggctaaaaat aggaggatta agccaataat
     3961 acttcccgga ataggaagat gaaaaatagt cgaaatagct tcccctaaaa atgaaaatac
     4021 tagaataatc ataaactgaa catatagttt catctttaca ccaccttaaa tactactaat
     4081 ccatctgagg tcattctctt ttagtccaga aaatccctta atgttagtac tgttattaag
     4141 tttactactc tgaaattatt tttcaaggct ataaaacgtt tacaccttaa aaatttgtcc
     4201 taagctattt tatttatttt gcacataatc acttgacaat ttatttttgt aggtgtatat
     4261 ttaatatata acaaaatttg atatataaaa ctgaacacta tatatcaaaa ctgaacccaa
     4321 ctaacaacaa aggaaaggag cgtcctatgc attttccagt ccccgcagtg ctgacagaat
     4381 ttctcatcat ggctattttg gaatccgatg attcttatgg ctatgaaatc tgtcagacca
     4441 ttaaattaat tgccaacatc aaagagtccg ccctctatcc catcctaaaa cgattggagc
     4501 aaaatgactt tttgactact tattcccaag aatatcaggg tcgtatgcgc aagtattata
     4561 gcctaactca gttaggtcac gaagaattgg tccgactcaa agatgactgg gatacctata
     4621 caaacacgat aaacggcatc atagaaggga gcgtccgcca tgacaagaac tgaatacatg
     4681 gagcagttag aaaaatatct caaaaaactg ccccacaaag aatactttga agccatcagc
     4741 ttctttaatg agtattttga cgaggctgga ccagagcgtg aaacagaaat tatagaagaa
     4801 cttggttcac caaaagaagc tgccagcgaa ctcattaaca acatgctcaa caagcaaatc
     4861 caggaggaga aggatcaaca agaacctatt caactcaact ggaaactctg ggttggtctg
     4921 ggagtcttaa gtatgacagg tctcttctct ttcttcctac tctttatcat gggagagttt
     4981 atcggagtca ttcctctgtt tgcgactctt atcctcggcg cctttttcct cggtcgctac
     5041 ttccgtaatt ttagccaaac aaaacgaacg ctctggttgg ctatcctagc tgtcatttcc
     5101 ctgcctatcg ccattccact tttgctcatt ctcctagcta gtctattggg attggtggcg
     5161 ctcatcttgg ccctcattgt cggtgccttt gttttgggtg tcgggcttct caccagcggt
     5221 ggctatctga tttgggaagc ctttagcctt atgtcagaag gtttcaatat cttcctcatg
     5281 gggtttggct caggtttgtc tttgattggc ggagctattc tcatctacat cttgactgga
     5341 ttttttgcct actggtcttg gcgactggtc aaggcttgct tcaaatggat cttgaaacga
     5401 ggtaaacgag catgaaaaag aaacttacca tcgccattat tatcggcttt gtcagcctga
     5461 ttgcaggctt aattctagct ggcattggat ttttcactgg gggcgtaacc cgtttggaag
     5521 aggttgctgc tccaacggaa gtccataaga ccttcacaga tttgaatacc attaaaattg
     5581 attttatccc ccatagcgtc tacatcaaag agtctagtga taacaactat catgtgacct
     5641 atgccaactc cgacaacaat atccaaaacc ctctaaaact cagtgagaaa gacggcgtct
     5701 taaccctctc tgcacaggaa ctagaatttg ccattgaggg aatcatgcag tatctgggag
     5761 aaagcttggc ccaacgtcgt atcaatgtct tctccgtcac cattgaagtg cctaaaggga
     5821 agacactgga taaattagag ggacacaatc tccacttcta tgattttggc ggtttcacga
     5881 ttgagaatat ccatatcaaa gaggcaaatc tgtctggtgg tgtcactatt gacaaggtga
     5941 ccattgacag cggccagatt gaagcaggct acgttcaagc gacccagtcc actctaaaag
     6001 atatgcacat caacctacag ggaagtagag tccgcctgta tgaaaccagt ttggaaaatg
     6061 tgaccatcga gggctatagc caactggata gcaagcaagt gacccttctt gacgacaatc
     6121 gcttcacccc gtccgacacc tattcttcta caacattttt ggatgtgacg gacaagagcc
     6181 tggcagatag caacttgctc atcaccaacc agatcgacaa gaaaaagtta gtagaagccc
     6241 aaggttacta ctatgaagat ggaaatgatt tgggagagat ggttaaccaa gacccttact
     6301 tacaagagcg actcggggaa atcggcattt tcactagcga taagtacaca aaattccctg
     6361 tcaagacaga aaacgaccta cagaccctaa ccctagaaaa caaggacagc cagaacaaac
     6421 tgaccataga agccaccaat gccacaatca atctagggac acctaaataa gaatgataaa
     6481 accagcttag tttcctaggc tggtttcttc atttatttac tagatagacc ttttttcaag
     6541 cttttccaaa gaccgatatc atctgtttgc agaatcaagc ccgcatagga ttttccgata
     6601 aagtagatcg ctgctactgt gctggcaatg agcataagga gggaaagccc tgcttccaga
     6661 ccatttgccc agccgttgat gatacgaatt ggcatgaaga aggtcgataa cagtggcaca
     6721 taggagccga ttttgagtaa gatagactcc tgagcctgct gacccaaggt cattgccccg
     6781 ataaagccaa taataatagg gtacatgact ggctggacgg ccttattgac atcttcctga
     6841 cggaccacca aggagccaca gagggccgca atgacaacaa tcaggaccag accaaagagg
     6901 gagaaaaaga gaataaacca gtcaaatccg cccaaaacag cctgagcaat gggattgtcc
     6961 tgcatagtga gcagggctag actggcaaac tggtaactgc ccacaccgcc aagagcatag
     7021 atgcccaagt gagtggcaat gaccatgaaa atccctagaa tccggccgta gaaataggtc
     7081 gaagccggta cactagagaa gataacctcc ataatcttgg tccccttctc actggccact
     7141 tcctgagcag ttgtcgaagc ataaatcata gtcagaacgt agaggaggaa aatcaaggca
     7201 aagaagagaa taaatttccc aatcttctca tagcccttgt tctcaaccaa ctggacctga
     7261 taagctgggg tgcgagccag tgtcgcctct tgctgactgg tcagctgggc atcttccttg
     7321 ttcaactggt cctgaagctc tgccagagtc tgctggatag ccgtttctgt ttctatactt
     7381 ggcagttcat ttccatgata aacggctgag agctgaccgt cgcttacggt tacgatcaaa
     7441 tagcccaaca agtcctcgtc ctcgagagct tttttagctg cttcttcatc ggtgtagtct
     7501 gaggttagcc cgtccaagtc ctcaaaggcc gactgaacag acgcctcttg actaatcagg
     7561 gcaatctcct gaccaccttg gtccatgcta gaccccgtca gataaccgat tcccaatgaa
     7621 aagaaaatca taataaaagg agcaaagacc ataaagacaa aggaccaaga cttgacctga
     7681 cggagatagg tttccttcgc aactagaaat aatgagttca ttctgccacc cccgatttga
     7741 ttttgaagat ttcatcgatt gtcggagctt gctggtcaaa ggtcgccaga tagcttcctc
     7801 cgctgatgag ctggaagagt tctggtccag cagcttcgtc gtccaagacc aaccgccact
     7861 tgtcctgatt ggtcatctga acagacagca catggggcag accttccagg cgttcccgtg
     7921 ccacgtcgga cgagataaag aggcgggtcc gaccaaactg gcgacggatt tcctgaatgc
     7981 ctccgttgag caccagctgt ccgtcctgaa tcatcagcag ttgatcgcac agttcctcca
     8041 cattggtcat gacatgatct gagaaaatga gagtcgctcc gcgttctttt tcttccaaaa
     8101 taacccgttt caagagatcc gtattgacag gatccagccc agaaaatggc tcatctaaaa
     8161 tgattaaact tggctgatgt atcaaggtaa caatcaattg aattttctgt tgattcccct
     8221 tggatagact ctttatcttg tcattcatct tgcccttgac ctgcaatcgc tccatccaca
     8281 caggcaattt ttctgctact tccttgctgg tcatgccctt aaggctagcc agataccgca
     8341 cctgctcaaa gacgctgagc ttgggcatca gacttcgctc ttctggcagg tagccgattt
     8401 tttggaacaa agctggtgtg actgcctgct ggtccaggat aatctcaccc tcgtatgtga
     8461 caaagcggag taaggaatgg aagaaggtgg ttttccctgc tccatttttc ccgactagac
     8521 cacaaatggt tccagacgga atagtgaagg aaatgtcctt caagacttcc ttgcttccgt
     8581 aacttttgca caagtgacga acttctaaca tctcaacctc cttagaattg attgctttta
     8641 ttgtacacct ttttgttgtc attgtaaatg atacatgtaa aaaaaagcaa aaaataacag
     8701 aacaggaaac ctgctctgct attatccaaa agaaactagt cctctgtcgg tcgatacatc
     8761 atgagaccta gtcctataaa gcctactaag aagagactca gcatccaaac ttgatgacta
     8821 ctatttccaa ccatagaaat ggtttgacga agacctgaaa cagaataggt cattggaaga
     8881 tagggctgaa tgacttggaa gaagcgtggg ctgagttcaa ttggataggt acctgcactt
     8941 gagccaagct gtagtaacaa gagaattaaa cttgcgaagg atccgaaacg attgttccag
     9001 cctaccaggg ctgtaacgag ggccatgaag gtccaagagg ctaaaaggat taatcccaag
     9061 gttgccattg gatgagccgg atcaattcca atcaagcgaa gaacaccgta cagaatcact
     9121 gctgctaggc tggctatcgt accattcagt aacaatttcc ctttagccca atcccaacga
     9181 tttttgtagg aacgattatc aatgtgtttg acaaaaataa cattcgcaga taaggctgca
     9241 accatcagtg cgacagatac catgtaagga gccattccga caccgttggt cttcacatca
     9301 tcttggtcac tgtgttccaa ggtgactggt tgagaaactg cttgtgcatt tttgtcttct
     9361 acagagacga ctgatagttg ttgactggct gaactgagtg aatttgttaa tgtttcacta
     9421 cctgtacgaa gactggaaat accgcttgtc aaggtttgac cgccactagc taattgatcc
     9481 gcaccagcaa ttaattgctg actaccagaa gccagctgtc ctgaaccgct gacaagttga
     9541 ctagagttag cagctaaggt tgccaatcct gatgttaact ggctacctcc tgattggatg
     9601 ctactattgt ttgcaaccaa ctgggctcca ccctctgcta attgggcaac accagcggta
     9661 taggctgtta ctcctgacat gagttgactc gctccgcctg acagttgcat ttgaagttga
     9721 ccaacaccac tcgtcaaggc ttgagttcct ggtagaactt gctggttcaa ggcggtattg
     9781 acctgactca agccacttga taggttttca atggctgttg tagcacctgg caatgcttga
     9841 ttggcagccg tgttgatctg accgacagct gattgcagct ggctcatttg tgttgccatg
     9901 ccagaaagac tttgtaagct tgataaggct tgactgagtt gagacaattg acccaaaatc
     9961 gtttgggctg ctgtcattgt tgtcgaaggt gagttttgaa gggcaccaac caattcagct
    10021 tgctgatcag ctgtcaagtt ttgataggta gccgttgctt gtaaggcttc aatgctggtt
    10081 gttttatcag cttgggctgc tgtcaacaat ccttgagcct gagcccccat ctccgtcaag
    10141 tggctagata gagtagaggt atcgactgca agtcctccga tactggataa gctatcgttt
    10201 aattggctga tggccgcctg caactgagga agccctgtca agagtgcttg tatctgacta
    10261 gactgttcag cagacaaact agttgaacta gcgagttgct ccaagcctgc ctgcaattga
    10321 ttggcccctg ttaccagttg ttcaacctga tttgctcctg attgcaattg tcccacccca
    10381 gcgatgagct gagaggaatt ggcatttaat tgctccgcac ctgaagcaag attcgctacc
    10441 ccatttgtgt aggtcgttaa gccactggac agtgtttgaa tacctatcgc agcctgattg
    10501 actccatctg tgtaagacac tactccggtg gccaattggt ttgctcctgt cacgagtgct
    10561 tgacccgaag tcgttaaagt agtcagtcca tttgaaagtg tttgactgcc tgattccaat
    10621 tgactagctc catctgtcaa ttgttgactt ccatctgctg cctcaaccat gccggtttga
    10681 atttctctca tactatcaaa aacggcagtc gtgtaggttt tggtaattgt ctctgaaaca
    10741 gatgtcttta atttctccat agctgattcg cccatcttag aagcaacaaa gctatgacct
    10801 ttggaggttt gataagaaat cgttatcggt tcaggctgat tcgtcaagag actggatgct
    10861 ttttctgaca aatcttctgg tagagtgatg accatatagt agtctccttc ttccaagcct
    10921 ttctctgcat ccttttctga tacaaagtgg aaatccagac ttttgctctc tttcatatta
    10981 tccaccatat catcaccaat tgtgagggtt ttatcttgaa agctcgccga ctggtcttga
    11041 ttgacaactg ctacaggaag ctggtctagt cggccgtaag ggtcccacat agaggttagg
    11101 aaactaatgt tatataaggc tgggacacag gcaataccaa taatggtaac caaagtcatt
    11161 ggttttttga aaatattctt tactttttgt aacataagca actcctttag acatcgtgtc
    11221 caaaaactga taaaatacat tatacaagta tcaatttcaa aatcaagtca gaagaattgt
    11281 ttttggacat tgtgtctaaa aatgttcaaa aggagaaatt atgggaacag ataatcggaa
    11341 agaacgaact cgacaggcaa ttttagaagc tatggtaacc tgcctggaat cacaaggatt
    11401 taatgacatt acaacaacac acctagccca gactgctggt atcagtcgtt ccagttttta
    11461 tacccactat aaggataagt atgaattgat tgactcctat caacagggac tttttcacaa
    11521 attagaggct atatttgacc gttatgatgg caatcgccaa tcacttttct tagaaatctt
    11581 tgacttactt taccgcgaaa aattactttc agccctatta actcacaatg gcacacaaga
    11641 aattcaaaat ttcttgatta acaaagtcag attgctggtc gcaaatgatt tagcggagcg
    11701 cttaggaaaa gagaatttat cacaactgga aaaagaatac cgtagtattt atttttcaca
    11761 tgccttcttc ggtatcatgc aggtatggat aaaaaatggg aaacaagaat cacctcaatt
    11821 catgacggat tttctaatca aaatgttacc gtaatcatta ttttctagct tcacaactta
    11881 agaattatgg tataatagct ataccatgca aacgttttct taaaaggaga taatgaaatg
    11941 attcaggcag aacatctttc aaaaacctat tcaatcattg ataaggaagt cggtctaaaa
    12001 ggctcgataa aggccttttt caagcccaag aaaaagaaaa tcccagccgt tcaagatatt
    12061 tccttacagg tgagaaaagg agaaattatc ggctatatcg gctccaatgg ttctggtaaa
    12121 tccaccacca tcaaaatgct gacaggtgtt ctctatccag accagggttc cgtccgcatc
    12181 aatgggctca accctcaaga aaatcgtaag gctgtcaata aacaaattgg agttctcttt
    12241 ggacaaaaat ctcacttgga ttggaactta cctgtccagg aatcctttat tctccacgca
    12301 aaaatttatg atgttccaga taaggtattc aaagagcgat tggctgtctt gattgatcta
    12361 ttggacttgg ctgatattat gaagcaacca atccgtaatc tgtcactcgg ccaacgggtt
    12421 cgctgtgaat ttgcggctat ctttatccac cagcctgctg ttgtcttttt agatgagcca
    12481 accattggct tggatgccag cgtcaaggag accattcgct ccttcattcg ctatatgaac
    12541 cagcaatacc agaccacttt tctgattacc tcccacgata tgaaggacat cgagagcctc
    12601 tgtgagcgga tttttatcat tgataagggc aagaaggtct acgatggttc actgaccgtc
    12661 ctcaaggaac gcttttccac agttaaaacc attctcttct ccacagaaaa accaattgaa
    12721 aaagatttgc aattggaagg ctggaaattt gaacgaatag atgattttca ctttgaaatc
    12781 cattatcaaa gcaagctttg gaccagtgcc caggtgattg agcaagtttt caatcattat
    12841 gccattgaag atgtcaccat gaaagaactt gaaattgaaa ccatggtgcg tcagatttat
    12901 gaggagggta tccatgcgta aatatctcta catgacccgc ctgaccatga tgaatgctat
    12961 gcagtataag gctttctttc tagcgacttt cgtttcactg gcagtgaaga ttttagtagc
    13021 tctctatgtc tggaaaacca ttttcttcac tcaatcagaa gtcaatggct ttaccctgca
    13081 aacctttacg acatatatca tctttgctaa tctactagcc agtttaaatt ctttctcact
    13141 cggagaagat ttatcctaca gcattttaaa aggaagcatt gctggagaat ttctcagacc
    13201 ctattccttt atcctagccc tctttttcaa agaccttgga aataagctct tggaactgat
    13261 aaagttcgcc atcgtattta tcggtattct acttgttcat caagatttct acctgcctga
    13321 tggccagacc attttgctct ttctagtcag ctccatcctc ggtatgttta tcgttcaact
    13381 actggatatg gcattcggtt ttttggcatt ttttacggtt aatgcctggg gagttatgct
    13441 tctgagaatg gggcttttca atctagcctc tggggcacta ttgccactca gcttctatcc
    13501 acaggctgtg gaaaactttt tgaaactcct tccctataat tatgcggtta acgttccagt
    13561 ttccatttta ttgggacagg aaagcgatct aactgctttg ggattgcaag ttatatggat
    13621 acccattcta gcctgcttca tcgctctact ctggtcccag gccaagcgtc gtattgtcat
    13681 ttttggaggt taacatgaag aaatatatca gcctctatct atataacatc aaggtctaca
    13741 tgatggccca gatgtccttt cgggtggact tcttcatcgg gcttttctcc tcgttgattg
    13801 aacaaattgt ctacttgatt ttcctcaata ttctctttgg aaatatcaag gaaatcgctg
    13861 gttttaacta cggtcaaatg ctttttatct atggaatagc gaccgtcgga cgctccattc
    13921 acttgatatt ctttgacaat ctctggatgt ttggcagtcg ctacatccga caaggcgaat
    13981 ttgaacgcct cctcctcatg cctgtgaacc cactttttca gcttatctgt gaacgaattc
    14041 aacctcaggg aattggaacc acacttatcg gttctcttgc actagtccaa gcttctaaag
    14101 aattgggcat ggaatggaat cttggaaaac tagccctact aatctttatt gccatttgta
    14161 tcggcctact ctatgcgacc attcaattag gaccaacggc cctagccttt tggattgttg
    14221 aatctttccc tctgaccatg gggattttct ccctcaatca aatggctcag tatcccctca
    14281 acatctatcc aaaactcatt caaatcctgc tgatatttgt tttcccctac gcctttaccg
    14341 cttatttccc agccctctac ttcttagact tatctatgtg gggactggct ctgccactgg
    14401 ttgtggtggt cttattttcc atcaattata aactcttccg ctatggtatg accaagttca
    14461 ccagtgttgg aaattaaaaa aagctgggag tgggaaagaa ctcaaccagt ctaa
//
LOCUS       DASFQS010000058        14046 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.060, whole genome shotgun sequence.
ACCESSION   DASFQS010000058 DASFQS010000000
VERSION     DASFQS010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 14046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14046
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.060"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(63..1742)
                     /locus_tag="U1041_001457"
                     /pseudo
     CDS             complement(63..1742)
                     /locus_tag="U1041_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646331.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
     gene            complement(1876..3045)
                     /locus_tag="U1041_001458"
     CDS             complement(1876..3045)
                     /locus_tag="U1041_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM4768564.1"
                     /translation="MFRLAKEELEKLGAYITATEIYQQPGLWKEAHQLYLDQLEKIEG
                     FLKAIKEKHDFVHVVFTGAGTSDFVGQSIANYLNQVNDLKHIRFSAIGTVELVSRPHD
                     YLQADIPTVLVSFARSGNSPESVAAVEVAKQLVDKLYQVTITCAPEGKLALAAEGDAE
                     NLLLLQPAGSNDKGFAMTGSYSCMALTALLVFSPASQEEKAAWVEIIARLGQDVLDRE
                     DYVQDLINLDFERVIYLGSGGFYGLAHEAQLKILELTAGKIATMYESPLGFRHGPKSF
                     INEKTLIFLFASNDAYTRQYDVDLLNEVHGDGIAERIVALSADKLADTEAANFVLAEG
                     GADLPDVFLTFPYILFAQTVSIMAAIKCNNLPDTPSPTGTVNRVVQGVIIHPLEK"
     gene            3321..3620
                     /locus_tag="U1041_001459"
     CDS             3321..3620
                     /locus_tag="U1041_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008808250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEM4768565.1"
                     /translation="MMNMQNMMRQAQKLQKQMEKSQAELAATQFTGSSVQDLVTATFT
                     GDKKLVSIDFKADVVDADDLETLQEMTIQAVNAALTKVDEATQKKLGAFAGKLPF"
     gene            complement(3658..5424)
                     /locus_tag="U1041_001460"
     CDS             complement(3658..5424)
                     /locus_tag="U1041_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM4768566.1"
                     /translation="MKKIQREFQKIYYNLDKILLLFFTLFTFMEFVWIPLNSWISEGL
                     LAMTGHAYLSPTNLLSVFAENPLVTGLFILLFFVNIAIAYLELALLFTGVWQLLDEKV
                     KHLPDYLRDVRDSMVAIIRHSSLPKVLFLLFYSVILLPSLRRVLNIYYFNKIVVPQFI
                     VDYLSNTVWLGILILFVLLLFFWLASRFMYALPNIYFEHRSVKESIAYSWKKTKGRKQ
                     VSSFFRLIWLVTFPVLLFTGIGILLYLVQLVAEPYLPDTGPSYWLAVVCYAILKLAYY
                     GVVALFMMGFVSLLTGKQLPNYRRKRLRHRLRLAILLVSSLVFGTQGALALYYPFDTL
                     PVTISHRGVDNGNAVQNSIEALEKTSQLKPDYIEMDVQETKDGQFIVMHDTDLLALTG
                     NPGGTHDYTLAELTGMTASENGMAAPVPSFDEYLEKADELGQKLLVEIKVTKADSPKL
                     TQNFLKKYGQRLIAKGHQMQSLDYRTIIEIKQYSEKLVSFFILPFNSIYPTTVADGYT
                     MEYTSLDQNFMVKSWIRGKSVYAWTPNEEESMTKMLLLQVDGIITDNMTDLQSLMEEM
                     KENRRYPDLFFLQFQSLIYNFE"
     gene            5504..6052
                     /locus_tag="U1041_001461"
     CDS             5504..6052
                     /locus_tag="U1041_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768567.1"
                     /translation="MIRIAPMTEDYLHTLWKIGHREAAPRWKEFAAPYFDDYQACATF
                     EDFQALELYQWLQKDCVRAILVDQLPIGFVSFYWECQPTRWLEIGIEIYDDKVWGKGY
                     GTAALQLWIDTIFQQFTELEHIGLTTWSGNKGMMRTAEKLGMTKEAHIRKVRYWQGHY
                     HDSIKYGILREEWLEQKKKSSS"
     gene            complement(6073..6567)
                     /locus_tag="U1041_001462"
     CDS             complement(6073..6567)
                     /locus_tag="U1041_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF536 domain-containing protein"
                     /protein_id="HEM4768568.1"
                     /translation="MGIEKTVSELAEILGVSRQAMNNRVKSLPEEFVDKNDKGVTVVN
                     RAGLIKLEEIYKTTIFEDEPISDEVKHRELMEILVDEKNAEIIRLYSQLKAKDKQLAE
                     KDEQLKVKDVQIAEKDKQLDQQQQLTLKAMADKEVLKLELDEVKAQAEEVQAKGFFAR
                     LFGR"
     gene            complement(6680..7057)
                     /locus_tag="U1041_001463"
                     /pseudo
     CDS             complement(6680..7057)
                     /locus_tag="U1041_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612380.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
     gene            complement(6979..7179)
                     /locus_tag="U1041_001464"
     CDS             complement(6979..7179)
                     /locus_tag="U1041_001464"
                     /inference="COORDINATES: protein motif:HMM:NF012457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEM4768569.1"
                     /translation="MTGEQREYRFPEGFLWGSSTSGPQSEGSVAGDGKGGNNWDYGKF
                     TKKGYMTLPKISRKTMGISNGW"
     gene            7357..8529
                     /locus_tag="U1041_001465"
     CDS             7357..8529
                     /locus_tag="U1041_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008808247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM4768570.1"
                     /translation="MNTVDTIIIGAGPAGMMAAISSSFYGKKTLLLEKNKRLGKKLSG
                     TGGGRCNVTNNGTLEDLLAGIPGNGRFLYSVFSQFDNHDIMNFFQENGVKLKVEDHGR
                     VFPTTDRSQTIIKCLEMKMLENGVDIRTGTEVVSVRKMDDLFHVKTSEETFTAPQLIV
                     TTGGKTYPSTGSTGFGHDIARHFKLEVTEIEAAESPVLTDFPHKKLQGISLDDVTLTY
                     GKHVITHDLLFTHFGLSGPAALRLSSFVKGGETAFLDALPTHSEQDLLEHLEKNREKS
                     VKNALRELMPDRLADFFAENYDCKVKQVSPKNLTDLVSLLKALPIKITGKMSLAKSFV
                     TKGGVDLKEINPKTLESKKIPGLHFAGEVLDINAHTGGFNITYCLATGWVAGSLHY"
     gene            8565..9257
                     /locus_tag="U1041_001466"
     CDS             8565..9257
                     /locus_tag="U1041_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768571.1"
                     /translation="MPINSFGQEIGMPLPHYTSGERPSLETIQGHTVRLEKLSLHHAD
                     DLYQFYGPNAKKADWTYLPLEPFEDRATFQDYFQTLLNSTDPYYFAIIDQATNQAVGT
                     FALMRIDTNHRSIEVGWVIFSPQLQRTRQATEAHYLLMNSVFEELGYRRYEWKCDSLN
                     QASQAAAKRLGFTYEGTFRQALVYKGRNRDTAWFSLLDHEWPDRKLALENWLKDSNFD
                     ELGQQKQPLSTF"
     gene            9338..10036
                     /locus_tag="U1041_001467"
     CDS             9338..10036
                     /locus_tag="U1041_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768572.1"
                     /translation="MQLKLSSISKKFDHKIILEDASFQFEQGKIYGLLGRNGAGKTTL
                     FNCIARNLTLDGGSIQFVKDENAFDYDNTDIGFTQTYPQLPAFMTAYEFVRFYMDIHK
                     DKLKSPRSPEEWLNLVGIGFEDQHRLLKDFSHGMQNKVQLLLSLIVQPPVLLLDEPLT
                     SFDPVAAHEFKQLIREAKKDSVIIFSTHILQLAQDLCDEIVLLHHQELQAVPSDKLHD
                     PDFEQEVVALLTVD"
     gene            10046..11665
                     /locus_tag="U1041_001468"
     CDS             10046..11665
                     /locus_tag="U1041_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768573.1"
                     /translation="MKTILRYFWYQEKYNLYRTVNGFFYYLRKLPLVGKSIPESIFKS
                     YSFKSALFLFLHILSVPSRFLAKGFWLLFHFYHASFWMNILSTEEPTFWNILPNTWLL
                     GFMFWFLFVGLNCRFSKVLDPVISKADREFMQNFGLAQSRFLQSQLFIEPILTTIFYL
                     PTLIIFCLMTNQWLVFPVGLMTVLAGHLTGHALNRWFFEHRMLTRRNSWHTWLWGAFI
                     LVLYVLAIIFRHQLSLGMLVPILLVQPFLIWFGYRYLKQQTNHLDYLQYCMDQSLQMD
                     KKIFEMTKGNEYTRQGLQMQAKLSMEKGKDLSHLSGMTYLNALLFDRYKKVLYKKVRG
                     WVLSLVVILVALEAFRYYLEPFELTDAVLLRCLPFSFMIMYVASSGKVVAQMVFVNCD
                     ISMLHYPFYREAKTIIAGFNYRFLQTFKLNLIFAFSLFLAIMVLGRFAFSLETILLTA
                     LLLISLTALFSFHDLFIYYILQPFTKDMEVVNPVYKFLSGALYWVAYLNIKLDIGSHL
                     YILLISLAMIAYVSIGYWILLKKAPQTFRLK"
     gene            complement(11807..12829)
                     /locus_tag="U1041_001469"
     CDS             complement(11807..12829)
                     /locus_tag="U1041_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family putative sulfate export transporter"
                     /protein_id="HEM4768574.1"
                     /translation="MVKENARGMVLCLVLAGISWCLGSWFSVVGGPVFALLIGMSLHS
                     YISRKNAFQPGLTYTSKKILQYAVICLGFGLNLSAVLAVGRQSLPIILSTISFALFLA
                     FLMWKILPISSHLATLIGVGTSICGGSAIAATAPVIQADDEDVAQAISVIFLFNVLAA
                     LIFPTLATWLGFSTDSGQAFGMFAGTAVNDTSSVTATAATWDSLYGLGSQTLETAVTV
                     KLTRTLAIIPITSVLAIWQARGKGVQADKKSLLAVFPTFILYFILASLVTTMAGHVGL
                     GADIFTPLKTLSKFLICMAMAAIGLRTNVFSLVKNGRVALFVGLVCWLGVTVLTLVWQ
                     AILGIW"
     gene            complement(12839..13162)
                     /locus_tag="U1041_001470"
     CDS             complement(12839..13162)
                     /locus_tag="U1041_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEM4768575.1"
                     /translation="MIKTSVLLIILASALVTWLPRVLPFVLTQNKSLPPKLVKFLSFL
                     PITIIFALTLSSIMDEKVGSLPSLLPVESLALIPTFLVVLRTKNILLAVVVGVLTTAA
                     LRLLF"
     gene            complement(13149..13850)
                     /locus_tag="U1041_001471"
     CDS             complement(13149..13850)
                     /locus_tag="U1041_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEM4768576.1"
                     /translation="MKEQDFLEGLRDAIPTALGYASIGLACGVVSVNSGISAVEMGLM
                     SLLVYAGSAQFVMCAMILAGAPLVSIAVTVFFVNLRNFLMCLHTTTIFQGNSLGSNIL
                     IGSFVTDESYAVLLRKHIEDKQIAPSWMYGNNFASYASWVTFTILGNLIGGLIPNPEQ
                     FGLDFALVAMFVGIFSGQLEAMARTIPLKKIGLILLAVGLAYVGLSVLVSSYVAVLLA
                     TLLGCFVGVMIDDKN"
BASE COUNT         3848 a         3309 c         2858 g         4031 t
ORIGIN      
        1 gcttcccctt tcggagttgg agctggagct gcgtccggag ttggaactgg tgtttcttct
       61 ttcgtttccg gagtcttctc ttctgttttc ggctcctgta tttcctcttc tactttcggt
      121 gccggagtgt cctcctcttt tggagctggt gtttcttcct cttttggagt ttctggtact
      181 ggagctggag ttggaacctc tttctcagtt tttggtgctg gagtgtctgg cattggagct
      241 ggaacttcgt ccactttcgg tgctggagtt ggagtgtctt cctcagcttt tggtgctggg
      301 gcgtctggcg ttttttccac taaagtacct tttgcaatca gacggttaac tggggcttta
      361 cggtcttctg aaagaagttt actttcaatg actttacctt caacaatcac atcttggtat
      421 ttcttaacca attctccttt ttgaccttcg cgaagaacct ttgtctgacc aagtggcaaa
      481 ctagcatcat cttgttcttc aaccatataa tccaaaattt ctcgctctac tcgttcttta
      541 acagtaaagt ccaattttgg tttttcagga gctgtcggtg ctgtatcggg atgtttctct
      601 accaaagtac ctttagcaat cagatgatca actggatctt tacgtttttt ggaaatgagg
      661 gtacttgcaa caattttatc cccaacaatc acatcttggt aagtctcaga ctcttcgcct
      721 ctctcacctt tttgtcgttc ctctttctta ccaagtggta agtttggatc ttcttgctct
      781 ttcgtttcga aatccaaaaa ttgatatgtt gttcgttttt gaattttaaa atctagtttt
      841 gttttttcgg ctgctttagg tgcctcctta ggaacttctg ttttgagatt atcgccttct
      901 atcttttcag ctatctcttt aatcctttca agggcttgtt ctgctctgtt agaagagatt
      961 attaaattgt ccgccccctg agtagcataa gtgttagttt cagtctgctc caagtattct
     1021 ttatactctt tttcaatttc tggattattg gcatatttat tacgatattg ggcaacttca
     1081 cgtgtcaagc gttccatttt aatgtgattt ttgaagtcaa tcaattccca gtaaactcta
     1141 tcaatatcag agctatcttc attaagggtt tggatatact ccatttgctg tttcccaact
     1201 cttgaaagat ctgtccagaa acttttttga agtgaataat ccggtccatt atattctcta
     1261 aacacctcca actcttttaa atctctattt agttcttgga gaatggtttg aatttttgaa
     1321 tcaatttctt tattctttgg agttttagca ggtacttctt ccttagcttc gcttgtgagg
     1381 gctgctggag caggagttgg ttcttctgtt ttttcaggtt cagaggctac tttttgttca
     1441 gccgacttcg ttgctgtctc ggctttttca gcaactggcg cttcttcctt aacttctggc
     1501 gcaacttttg attcagaatt tgtattctct gtacttactg ttccagtaat ctggactgtt
     1561 ggctctgttt cactcgttgg ctgaactgct tcaacttgag tagctgttga agtctctgtc
     1621 gccgcaaaag cggttggtgt cgagactccc gcaccaagta ggcaagtagc aattagcacc
     1681 gagcctacgc cgactttaaa tttacgaata ctatatctga attttttatt tgcagtttcc
     1741 atttctacca tccctaaata tattatattt tattatatac tatattatac cacgatactc
     1801 aggtggttgg atgtgttttt tatgtgttaa aactctaccg aatagctctg cttcttcatc
     1861 attgaataca tgtaactatt tttctagtgg atgtataatc acaccctgca ccacacggtt
     1921 gacggtgcct gttggcgatg gtgtatctgg caagttgttg cacttaatgg ctgccataat
     1981 agataccgtt tgggcaaaga ggatgtaagg gaaggttagg aaaacatctg gcagatctgc
     2041 tccgccttct gccaagacaa agttagctgc ctctgtatct gctagcttgt cagccgacaa
     2101 tgccactatc cgctctgcta tgccatcacc atgaacttca ttaagcaagt ccacatcata
     2161 ctgacgagtg taggcatcgt ttgaggcaaa gaggaaaatc aaggtctttt cattgatgaa
     2221 ggattttggt ccatgacgga aaccgagtgg tgactcgtac atggtcgcaa ttttgcctgc
     2281 tgtcaattcc agaattttca actgagcttc gtgggcaaga ccatagaaac cacctgaacc
     2341 gaggtaaatc actcgctcaa aatcaaggtt aatcaagtct tgcacgtagt cttcacggtc
     2401 caaaacatct tgacccagac gggcaatgat ctcaacccaa gcagcttttt cttcttgact
     2461 ggctggcgag aagacgagga gggctgtcag agccatacag ctgtaagaac ctgtcatggc
     2521 aaagccctta tcgtttgaac cagctggttg caagagcagg agattttcag catctccttc
     2581 agccgctagt gccagcttac cttctggtgc acaggtaatg gtcacttgat acaatttatc
     2641 taccaattgc ttggcaactt ctactgctgc cacactttct ggtgaatttc ctgaacgggc
     2701 aaaggatacc aaaaccgttg gaatatctgc ctgtaaatag tcatgtgggc gactaaccag
     2761 ctccactgta ccaatagcag aaaaacgaat gtgtttcaag tcattgactt ggttgaggta
     2821 gttggcaata ctttgcccaa caaaatcaga agtccctgca cctgtaaaaa cgacgtgaac
     2881 aaagtcatgt ttttccttga tagccttcaa gaagccctcg attttctcaa gctggtcaag
     2941 atatagttga tgagcctctt tccacaagcc aggctgttgg taaatctcag tggctgtgat
     3001 ataggccccc aatttttcta attcttcttt tgctaaacgg aacatagctc ctccttgttt
     3061 ttctggttat aaccagtttt tcttatatta tagcgaattt atccctcaaa gtcaatttaa
     3121 aatagattaa tatgtcaaat tcgtgtccgg tattgctgac tataacttat tttaagaagg
     3181 tagcattatc tacataaaac atgttataat atttactacg cctctgcctt tgaaaatttt
     3241 taacaataag gctaaataag gcaaggaaaa attacaaaca aggtctaacc ccttgatagg
     3301 aaaggaatct taaaaatctt atgatgaaca tgcaaaacat gatgcgccaa gctcaaaaac
     3361 ttcaaaaaca aatggagaag agtcaagctg agttggctgc tactcaattt actggtagct
     3421 ctgtacagga cttggttact gctactttta ctggagataa gaaattggtt tctatcgact
     3481 tcaaggctga tgttgtggat gcagacgacc ttgaaacctt gcaagaaatg acaatccaag
     3541 cagtcaacgc tgcacttaca aaagttgacg aggcaactca gaaaaaacta ggtgcctttg
     3601 caggtaaatt acctttttaa aagaaaacgc gattggatat tctcctctcg cgttttttta
     3661 ttcaaaatta taaatcaaag actgaaattg caggaaaaag aggtctggat aacgtcgatt
     3721 ctctttcatt tcctccatca gactttggag gtcggtcatg ttgtcagtga tgataccgtc
     3781 cacttgtagc agcaacatct tggtcatact ctcttcttca ttcggtgtcc aagcataaac
     3841 tgacttccca cgaatccaag attttaccat aaagttttga tccagcgaag tgtattccat
     3901 agtatagccg tcagcgaccg tcgtcggata gatagagttg aacggaagaa taaagaagga
     3961 tactaatttc tcgctatact gctttatttc gataatagta cggtagtcta atgattgcat
     4021 ctggtgtcct ttggcaatca aacgttgacc gtattttttt aagaaattct gggtgagttt
     4081 tggcgaatct gccttggtca ctttaatttc taccaataat ttctgtccca gctcatctgc
     4141 tttttcaaga tattcatcaa aagaaggaac tggagctgcc atgccgtttt ctgatgcagt
     4201 catccctgtc aactctgcaa gagtatagtc atgtgtacct ccgggattgc ccgtcaaagc
     4261 caataaatcc gtgtcatgca tgacaataaa ctgaccatcc ttcgtctcct gaacatccat
     4321 ctcaatatag tctggcttga gctgagaggt tttctctagg gcctcgatag agttctggac
     4381 agcattgcca ttgtcaacac cgcgatggga aatggtaact ggcagggtat cgaagggata
     4441 gtagagtgca agcgctcctt gtgtaccgaa taccagacta gatactagca aaattgccaa
     4501 tcgcaggcga tgacggaggc gtttacggcg gtagtttggc aattgtttcc ctgttaagag
     4561 acttacaaat cccatcataa agagtgcaac tactccgtag taggctaatt ttaggattgc
     4621 ataacaaaca actgccagcc aatatgaagg gcctgtgtct ggtagataag gttcagccac
     4681 tagctgtact agatagagca atatccctat tcctgtgaat aggaggactg gaaaagtgac
     4741 cagccaaatc agacggaaaa aggaactgac ttgttttctt cccttggtct ttttccaaga
     4801 ataagcgatg gactccttca cactcctgtg ttcaaagtaa atgttcggca gagcgtacat
     4861 aaagcgtgat gcgagccaga agaacaagag gagaacgaac aaaatcaata ttcctagcca
     4921 gactgtgttg gataggtaat ctacgataaa ttggggtact acgattttat taaaataata
     4981 gatatttaat acccggcgta aagacgggag aagaataact gagtaaaaga gtagaaataa
     5041 aacctttggt aggctactgt gacggataat cgccaccata ctatctcgta catcccgtaa
     5101 atagtcgggg aggtgcttga ctttttcatc caacagttgc caaacccctg tgaacaatag
     5161 agctaattct agataggcaa tggcaatgtt gacaaaaaag aggagaataa acaagcctgt
     5221 cacgagcgga ttttcagcaa acaccgacaa caaattcgtc ggtgaaaggt aggcatgccc
     5281 tgtcatagct aagagtccct cagaaatcca tgaattgagc ggtatccaaa caaattccat
     5341 aaaggtaaac agggtaaaaa agagcaaaag aatcttgtct aagttgtaat atattttttg
     5401 aaattcacgc tgtatctttt tcatgattct agtgtcccat attctgacag gaattgcaag
     5461 ccttcatcaa atatgctaga ctagaaaaat aaaggaggtt ctcatgatta gaattgcacc
     5521 gatgactgaa gattatttgc atacactttg gaagattggc catcgtgaag ccgcacctcg
     5581 ctggaaggaa tttgctgctc cctattttga tgactaccag gcctgcgcca cttttgaaga
     5641 ttttcaagca cttgaactct accagtggtt acaaaaagat tgtgtcagag caatcctagt
     5701 ggatcagctg cctatcggat ttgtgagctt ttactgggag tgccagccaa cacgctggct
     5761 cgaaatcggg attgaaatct atgacgataa ggtctgggga aaaggatatg gcacagctgc
     5821 tctccaactc tggattgata ccattttcca gcaatttaca gaattggaac acatcgggct
     5881 cactacctgg tctggcaaca agggcatgat gagaaccgca gaaaaattag gcatgaccaa
     5941 agaagcccac atccgcaagg ttcgatactg gcaagggcat tatcatgatt ctatcaaata
     6001 tggaattctg agagaagaat ggctagaaca aaagaaaaaa tcaagttcct aagagcttga
     6061 ttttttactt atctatcttc caaacaaacg tgcaaagaag cctttagctt gcacttcttc
     6121 tgcctgtgct ttaacttcgt ccaattccaa cttgagaact tccttatcgg ccatagcttt
     6181 tagtgtcaat tgctgttgct gatccaactg tttatccttc tcagcaatct gcacatcttt
     6241 aaccttgagt tgttcatctt tttcggcaag ttgcttatct ttggctttta attgactata
     6301 taagcggatg atttcagcat ttttctcgtc aactaaaatt tccatcaatt cacgatgctt
     6361 gacttcatcg ctaatcggct catcttcaaa gatggttgtt ttgtagattt cctccaactt
     6421 aatcaagcca gcacgattta caacggtcac acccttgtca tttttatcta caaattcttc
     6481 aggaagtgat ttgacgcgat tattcatagc ctgccggctc actcctaaaa tttcagctaa
     6541 ctcactgact gttttttcga ttcccataat atcctcggta cttacatttc tcatagtttg
     6601 tatcattaaa atattaccac aaaagcccaa gttctgtcaa attatgggag ttttccaaaa
     6661 caagactatc accctctagc tatcttgtaa atccgttctc ttcacttact tgtttgaacc
     6721 aatatccaga tttttttata gttcgtttct gtgtttcaat atccaaggaa ataagtccgt
     6781 atctattttt ataggcattt aaccaagacc agcaatcgat aaaggtccag accatatagc
     6841 ccttacagtt cgccccttca tcaatacctc gatggagctg aatcaaatgg tcttccatga
     6901 agttaatccg atagtcatcc tgaatcatgc cattttcttc aaaaacatcc tccccttcaa
     6961 ctcccatgcc gttctcagtt accaaccatt cgatattccc atagttttcc tggatatttt
     7021 tggcaatgtc atataaccct tcttcgtaaa tttcccataa tcccagttat tccccccctt
     7081 tccatcacca gctacgcttc cctcactttg aggccctgaa gtggaggatc cccacaaaaa
     7141 accttctgga aaacgatact ctctttgctc gcctgtcatg ctaccaccta ttttccttta
     7201 atttacagat tggacgtcta ataaaaacta gacttcctca gtctcattat actcccttcg
     7261 atctgcaatc gtcatcttct atctcaagga aaaattccac aaatcatagc aaagacccaa
     7321 actactttct tgttaaaaat atgatacaat aaaggcatga atacagtaga tactattatt
     7381 atcggagcgg ggcctgctgg catgatggcc gccatttctt ctagttttta tggcaagaag
     7441 accctgctcc ttgaaaaaaa caagcgtttg ggcaagaaac tatctggcac aggcggcgga
     7501 cgttgcaatg tgaccaacaa cggcacactg gaagacctgc tggctggcat tcctggcaac
     7561 ggccgctttc tttacagcgt cttttcccag tttgacaacc acgacatcat gaatttcttt
     7621 caggaaaatg gggtcaagct caaggtggag gaccacggcc gtgtctttcc gaccaccgac
     7681 cggtcccaga ccattatcaa gtgcctggag atgaaaatgt tggaaaatgg cgtggacatc
     7741 cgcacaggta cggaggtggt gtccgtccgc aagatggacg acctcttcca tgtcaagacc
     7801 agcgaggaaa cctttacagc tccccagctc attgtcacca ccggcggcaa gacctaccct
     7861 tccactggct cgactggctt tggtcacgac attgcccgcc actttaagct ggaagttacg
     7921 gagattgagg ctgctgaaag ccctgtcctg accgacttcc cccacaagaa gctccaaggc
     7981 atttccctgg acgacgtcac cctgacctac ggtaagcacg tcatcaccca cgacctgctc
     8041 ttcacccact ttggtctgtc ggggcccgct gctcttcgct tgtctagttt tgtcaaaggc
     8101 ggtgaaaccg catttctcga tgctctgccg acccattctg aacaagatct gcttgagcat
     8161 ttagaaaaga acagggaaaa atccgtcaag aatgccctac gagaactcat gccagaccgc
     8221 ctagccgact ttttcgcaga gaactacgac tgcaaggtca aacaagtttc cccaaaaaat
     8281 ctgactgatc tggtctccct tctcaaagcc ctgccgatta agattacggg caagatgtcc
     8341 ttggccaagt cctttgtgac caagggaggc gttgacctca aggaaatcaa ccccaaaacc
     8401 ttggaaagta agaaaattcc tggcctccac tttgcaggtg aggtcttgga catcaatgcc
     8461 cacacaggcg gctttaacat cacctactgt cttgcaactg gttgggtggc tggaagcttg
     8521 cattattaaa cttttgcctt cccattcaac ttaaaggaga aactatgcct atcaattcat
     8581 tcggtcaaga aattggtatg cccttgccac attacaccag tggtgagcga ccaagtctgg
     8641 agactataca aggacacaca gtccgcttag aaaaactgag cctgcaccat gcagatgacc
     8701 tctatcagtt ttatggacca aatgccaaga aagctgactg gacctacttg ccccttgaac
     8761 cctttgagga cagagcgaca tttcaggact atttccagac tcttttgaac tcgaccgacc
     8821 cctattattt tgccatcatt gaccaagcaa ccaatcaggc agtcggaacc tttgcactca
     8881 tgcgaataga taccaaccat cgtagcattg aagtgggctg ggtcatcttt tctcctcaac
     8941 tgcaacggac ccgacaggcg acagaagccc actatcttct catgaactct gtgtttgaag
     9001 aactgggcta tcgacgttat gaatggaaat gcgactcgct caaccaagcc agtcaagctg
     9061 ctgccaaacg cctgggattt acctacgaag gcaccttccg tcaggctctg gtttataagg
     9121 gacgtaaccg agataccgcc tggttttctc tattagacca cgaatggcct gaccgcaagc
     9181 ttgcccttga aaactggcta aaggatagta acttcgatga actgggtcag caaaaacagc
     9241 ccctctcaac tttctaaatt caagcaaaat ctgcttgaat ttttttgttt tttgttgtat
     9301 gataaaacca taacaatata acaaaaggag attggctatg caactgaaac tttcttctat
     9361 ttctaaaaaa tttgatcaca agattattct ggaggatgcc agttttcaat tcgaacaagg
     9421 caagatttat ggcttgttgg ggcgaaacgg ggcaggtaag acaaccttgt tcaactgcat
     9481 tgcccgtaat ctgaccttgg atggtggctc gattcagttt gtgaaggatg aaaatgcctt
     9541 tgactacgac aatacggaca tcggttttac ccagacctat ccgcaactgc ctgcctttat
     9601 gacggcctat gagtttgtgc gtttctatat ggatatccac aaggataaac tcaaatctcc
     9661 tcgtagtcca gaagaatggc taaacttggt cggtatcggt tttgaagacc agcaccgtct
     9721 gctcaaggat ttttcccacg gtatgcagaa caaggtccaa ttactcctgt ctttgattgt
     9781 tcagcctcct gttcttctct tggatgagcc actgacttcc tttgaccctg tggctgccca
     9841 tgagttcaaa cagctgattc gagaggctaa aaaggattct gttatcatct tttccaccca
     9901 tattctgcag ctggctcagg atctctgtga tgagattgtt ttactacatc accaagaact
     9961 acaggctgtt ccgagtgaca agctccacga tcctgatttt gaacaggaag tggttgcctt
    10021 gctgacagta gactaggagg agcttatgaa aaccattcta cgttattttt ggtatcagga
    10081 aaagtacaac ctctatcgga ccgtcaacgg atttttctac tatttgcgaa aactgccact
    10141 tgttggcaaa agcattccag agagtatttt caaatcttac agttttaagt ccgctctctt
    10201 tttattcctg cacattctgt ctgttcccag tcgtttttta gccaagggat tctggttgct
    10261 ctttcatttc tatcatgctt ctttctggat gaatatccta tctaccgagg aaccgacctt
    10321 ttggaatatt cttccaaaca cttggctcct tggctttatg ttctggtttt tgtttgtcgg
    10381 actaaactgt cgttttagca aggtcttaga cccagttatc tcaaaagcag atagagaatt
    10441 tatgcagaat tttggtctgg ctcaatccag atttctacaa agccaactct ttatcgagcc
    10501 catcctgact acgattttct acctaccaac ccttatcatt ttttgcctga tgacaaatca
    10561 atggctggtc tttcctgtcg gtctgatgac cgtactagca ggccacctga ccggtcatgc
    10621 tctcaatcgt tggttctttg aacatcgtat gttaacccgt cgcaattcgt ggcatacttg
    10681 gctatggggc gcgtttattc ttgttttata tgttctggcg attatcttcc gtcatcagct
    10741 ctccttaggc atgctagtcc ctatcctgct tgtccaacca tttctgattt ggtttggcta
    10801 tcgttatttg aaacaacaga ccaaccacct agactatctt caatattgca tggaccagtc
    10861 cttgcagatg gataagaaaa tttttgagat gaccaaaggg aacgagtaca cccgacaagg
    10921 tttgcagatg caggcgaaac tgagtatgga aaaaggaaag gacctgtccc acctatcagg
    10981 catgacctac ttaaacgctc tgctatttga ccgctacaaa aaagtcctct ataagaaggt
    11041 gcggggctgg gtcctgtcgc tcgtggtgat tctggtcgct ctggaggcct tccgctacta
    11101 tctggagcct tttgaactga ccgatgccgt cctcctgcgg tgcctgccct tctcctttat
    11161 gattatgtat gtggcttcgt cgggcaaggt agttgctcag atggtctttg tcaactgcga
    11221 catatccatg ctccactatc ctttttatcg cgaggccaag accattatcg ctggttttaa
    11281 ctaccgcttt ttgcaaacgt tcaagcttaa tctcatcttt gcgttcagtc tctttctagc
    11341 tatcatggtg ctgggacggt ttgctttcag tctggaaacc attctcctga cagccttgct
    11401 ccttatcagc ctgaccgctc ttttttcctt ccacgatctc tttatctact atattctcca
    11461 accctttacc aaggacatgg aggttgtcaa cccagtctat aaatttctca gtggagctct
    11521 ctactgggta gcctatctca atatcaagct ggatataggc agtcacttgt acatcctact
    11581 catttccttg gctatgattg cctatgtcag catcggttac tggattttat tgaaaaaagc
    11641 tccgcagacc tttagattga aataataaaa atagcctctc gcaagagaag gctgttttat
    11701 actcaataaa aatcaagagt agcctagaaa acgaaggtga tgatagaact gaggttcatc
    11761 gaaccaagtt gacaacggat aactttgatt ttcgaagagt tttgctttac caaattccca
    11821 agattgcctg ccaaaccagt gtcagcacag tcacacccag ccagcaaact agtccgacaa
    11881 aaagagcaac tctgccattt ttcaccaaag aaaagacatt ggtccgcaag ccaatggctg
    11941 ccatggccat gcaaatgaga aacttggata gggttttgag cggagtaaaa atgtccgcac
    12001 ctaatccaac atgacctgcc attgtagtca ccagactggc tagtataaaa tagaggataa
    12061 aggtcggaaa aactgccaag agggacttct tgtctgcctg aacccccttt cctcgagctt
    12121 gccaaatcgc caaaaccgac gtaatgggaa taatggccag agtccgcgtc agcttgacgg
    12181 tcactgccgt ttccaaggtc tgactgccca ggccgtaaag actatcccaa gtagccgctg
    12241 tcgcggttac cgacgaggtg tcattgaccg ccgttccggc gaacatccca aaggcctgac
    12301 ccgaatcggt cgaaaaccca agccaagttg ccaaagtcgg aaaaatcaag gccgccaaga
    12361 cattaaagag aaagatgacc gagatagcct gagccacatc ctcatcatct gcctggataa
    12421 cgggagctgt cgccgcaatg gcagagccac cacagataga ggtccctacg ccaatcaagg
    12481 tcgccagatg agatgaaatg ggcaagattt tccacatcag aaatgccaaa aacaaggcaa
    12541 aactgatggt cgaaagaata attggaagag attgacgccc aactgcaaga accgcagaca
    12601 gattcagacc aaatcccaag caaatgaccg catactgcaa aatcttctta gaggtatagg
    12661 tcaagcctgg ctgaaacgca tttttccttg agatataaga gtgcaggctc atcccgatta
    12721 gaagggcaaa aacaggccca cccactactg aaaaccaact tcctaagcac cagcttattc
    12781 cagccaagac tagacaaagt accatacctc tggcattttc cttaaccata agtccctcct
    12841 agaaaagcaa gcggagagca gctgtcgtca agacaccaac cactactgcg aggaggatat
    12901 ttttggtcct caggaccacc aaaaaggtcg gaatgagggc cagactttcg acagggagaa
    12961 ggctgggaag ggagcccacc ttttcgtcca tgatgctgga cagggtcaat gcaaagataa
    13021 tggtgatggg tagaaagctg agaaatttca ccaactttgg aggcagggat ttgttctgcg
    13081 tcaggacaaa aggcaggacg cgtggcagcc aggtcactag ggctgacgcc agaataatca
    13141 atagaacact agtttttatc atcaatcatc acccccacaa aacagcccaa aagtgtcgcc
    13201 agaagcaccg caacatagga cgacactagc acagacagac cgacataggc cagacccacc
    13261 gccagcaaaa tcaagccgat ttttttcaaa ggaatggtcc gagccatggc ctccaactga
    13321 cctgagaaaa tgccgacaaa catagccacc aaggcaaaat ccaagccaaa ctgctcggga
    13381 tttggaatca gccctccaat cagattaccc aaaatggtaa aggttaccca agaagcgtag
    13441 ctcgcaaagt tgttgccgta catccagctt ggtgcaatct gcttgtcttc aatgtgctta
    13501 cggagtagca ccgcatagga ctcatccgtc acaaaagagc caatcaggat attagacccc
    13561 agactgttgc cctgaaaaat ggtcgtcgta tgcaggcaca tgaggaaatt ccgcagattg
    13621 acaaagaaaa ctgtcactgc aatggacacc agaggagccc ctgccaaaat catagcacac
    13681 atgacaaact gggcacttcc tgcatagacc aaaaggctca tcagccccat ttccaccgca
    13741 gaaatgccgg aattgaccga tacgacaccg caggccaaac cgatactggc atagcccaga
    13801 gctgttggga tagcatcccg cagaccctct agaaaatcct gttctttcat agaaacctcc
    13861 taagacactt actgtgcaaa tatgtatttt tctattctct cataatgacc actgattttc
    13921 aaccatttcc caacaacaaa aggacctaaa gtctaatgac cttagatcct ttttattttg
    13981 aactatacag atggatgact taccaagaga tatccatctg tactcaactt ttcgagaaaa
    14041 gctagt
//
LOCUS       DASFQS010000059        13930 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.061, whole genome shotgun sequence.
ACCESSION   DASFQS010000059 DASFQS010000000
VERSION     DASFQS010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13930
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.061"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            81..962
                     /locus_tag="U1041_001472"
     CDS             81..962
                     /locus_tag="U1041_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768577.1"
                     /translation="MTLYILANPNAGSHTAEHIIFKIKESYPQLAVNIFMTVGPEDEK
                     SQIEAILKEFVSSEDQLMILGGDGTLSKALRFWPASLPFAYYPTGSGNDFAKAMNITS
                     LYRSVDAILEGKTSRIYVLNSSYGTVVNSMDFGFAAQVINGSTNSILKKILNKVKLGK
                     LTYLFFGIKTLFSKQAINLELTLDEKSYQLANLFFISVANSLYFGGGIMIWPTASAKK
                     KEVDIVYFKNGNFYQRLQSLLALLTKRHESSHTIQHLTGVDVVLKSKEKLLLQIDGET
                     CTANEVTLTYQERSMYL"
     gene            972..1175
                     /locus_tag="U1041_001473"
     CDS             972..1175
                     /locus_tag="U1041_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HEM4768578.1"
                     /translation="MYQLGSFVEMKKPHACVIKSTGKKANKWEVIRLGADIKIRCTNC
                     DHVVMMSRHDFERKMKQVLPSEA"
     gene            1279..1623
                     /locus_tag="U1041_001474"
     CDS             1279..1623
                     /locus_tag="U1041_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018381463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768579.1"
                     /translation="MKQLAQQIKNLRTTKNLSQDELAEKLYISRQAVSKWENGEATPD
                     IDKLVQLAEIFGVSLDYLVLGKEPEKEIVVEQRGKMNVWEFLANYWWVLIPIMIIAFG
                     LFAAAMRILQKF"
     gene            1716..2831
                     /gene="ychF"
                     /locus_tag="U1041_001475"
     CDS             1716..2831
                     /gene="ychF"
                     /locus_tag="U1041_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002269933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEM4768580.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMV
                     EVPDERLQKLTELITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVH
                     VVRAFDDENVMREQGREDAFVDPIADIDTINLELILADLESINKRYARVEKMARTQKD
                     KDSVAEFAVLEKIKPVLEDGKSARTVDFTDEEQKIVKQLFLLTTKPVLYVANVDEDKV
                     ADPESISYVQQIRDFAATENAEVVVISARAEEEISELDDEDKGEFLEALGLTESGVDK
                     LTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQCAGIIHSDFEKGFIRAVTMSYDD
                     LIQYGSEKAVKEAGRLREEGKEYVVQDGDIMEFRFNV"
     gene            2989..3558
                     /locus_tag="U1041_001476"
     CDS             2989..3558
                     /locus_tag="U1041_001476"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000163933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEM4768581.1"
                     /translation="MTRLIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVIFSHDKIF
                     QADIATTFIDGEKVFLVKPTTFMNESGKAVHALMSYYGLDETDILVAYDDLDMAVGKI
                     RFRQKGSAGGHNGIKSIVKHIGTQEFNRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEI
                     DLALDKLDKAVNVYLEEDDFDTVMRKFNG"
     gene            3558..7052
                     /gene="mfd"
                     /locus_tag="U1041_001477"
     CDS             3558..7052
                     /gene="mfd"
                     /locus_tag="U1041_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEM4768582.1"
                     /translation="MNILDLLHKNKQINQWQSGLNKSTRQLLLGLTGTSKSLVMATAY
                     DCLAEKIMIVTATQNDAEKLVADLTAIIGSENVYNFFTDDSPIAEFVFASKERTQSRI
                     DSLNFLTNATQSGILVASMAACRVLLPSPETYKGSKIQLEVGQEIEVDKLVKNLVNIG
                     YKKVSRVLTQGEFSQRGDILDIFDMQAEAPYRIEFFGDEIDGIRIFDVDSQKSLENLD
                     EISISPASDIILSSEDYSRASQYIQTAIEQSTREEQQSYLREVLADMQTEYRHPDLRK
                     FLSCIYEQSWTLLDYLPKSSPLFLDDFHKIADKQAQFEKEIADLLTDDLQKGKTVSSL
                     KYFASTYAELRKYKPATFFSSFQKGLGNVKFDALYQFTQYPMQEFFHQIPLLKDELTR
                     YAKSNNTVVIQASSDVSLHTLQKTLQEYDIHLPVHAADKLVEGQQQVTIGQLASGFHL
                     MDEKLVFITEKEIFNKKMKRKTRRTNISNAERIKDYSELAVGDYVVHHVHGIGQYLGI
                     ETIEISGIHRDYLTVQYQNSDRISIPVEQIDLLSKYLASDGKAPKVNKLNDGRFQRTK
                     QKVQKQVEDIADDLIKLYAERSQLKGFAFSPDDNNQVEFDNYFTHVETDDQLRSIDEI
                     KKDMEKDSPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAQQHYANFQ
                     ERFAEFPVNVDVMSRFKTKAEQEKTLEKLKKGQVDILIGTHRLLSKDVVFADLGLLVI
                     DEEQRFGVKHKERLKELKKKIDVLTLTATPIPRTLQMSMLGIRDLSVIETPPTNRYPV
                     QTYVMETNPSVIRDAMLREIDRGGQVYYLYNKVDTIEQKVSELKELVPEATIGYVHGQ
                     MSEIQLENTLYAFVEGEYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGR
                     VGRSSRIAYAYLMYRPDKSLTEVAEKRLEAIKGFTELGSGFKIAMQDLSIRGAGNILG
                     AAQSGFIDSVGYEMYSQLLEQAILEKQGKVTQRQKSNSEVNLQIDAYLPSDYIGDQRQ
                     KIEIYKRIKNIDSRVNYQELQEELIDRFGEYPDVVAYLLEIGLLKSFLDQVFCHTVLR
                     RQHQVTVTFEPMAGQIFLTQDYFEALSVTNLKAQITENKGKLAVVFNIQQKKEYEILE
                     ELISFAEKLKEIKARKAE"
     gene            7102..7374
                     /locus_tag="U1041_001478"
     CDS             7102..7374
                     /locus_tag="U1041_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEM4768583.1"
                     /translation="MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVN
                     DQVEIQFGNKLLTVKVLEMKDSTKKEDALKMYEIISEKRIEKDEEI"
     gene            7361..7729
                     /locus_tag="U1041_001479"
     CDS             7361..7729
                     /locus_tag="U1041_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEM4768584.1"
                     /translation="MKKSKILQLNNAFIQSERKKTQHQLAERQQKNRFMGAILILVIF
                     LFMLPAYNLVGTYTNIQQQEKKLAELEKNYEELTKEQQQEAEMVAKLKNEEYAAKYVR
                     AKYQYSKEGEFVYNIPGLPK"
     gene            7852..9132
                     /locus_tag="U1041_001480"
     CDS             7852..9132
                     /locus_tag="U1041_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEM4768585.1"
                     /translation="MQKKLLVWLLPVLFGWQVVDSTEIPFELTAQEEYELTHTIYDQY
                     FQTIPQNPNVFQTENLYSDEELTIAGGQLQPNQHFSITDVLVNSKKELVFQIDDKGYI
                     LASRHLLFDDVIVTETTVEQTYWTKKGFTLLTSPIANEATEIKNDLQPYQAVMVSKIV
                     TTSLGDFAYVTDKGWIAVNNLSKTDNRVEAVQELLTNKYSKDTIGIYVKQLSTGQTAG
                     VNQEKLFYSASIAKLPILYYVQEQLNAGYIDLTTKVKYTAESMSFPGAYAAGGSGSLS
                     KTPDNKDYSVEELINKTAKESDNVASNLLSYYVANKFDSNFYQVITAKTGSEWSMVTR
                     ETSAEIAGKTMEALYIQNGYVLESLLSTQFDNQRISKDISVPVAHKIGDADDVKHDVA
                     IVYAESPFVLSIFTDKSNYDEITQIANDIYGILK"
     gene            9133..10401
                     /gene="tilS"
                     /locus_tag="U1041_001481"
     CDS             9133..10401
                     /gene="tilS"
                     /locus_tag="U1041_001481"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEM4768586.1"
                     /translation="MKDRFLKVTLDGHFFDKHKKVLVAVSGGLDSMNLFHLLYECKQV
                     LGIELGIAHINHGQREESVIEEKYLRQLAEESNVPFYLSYFEGVFSEESARKWRYGFF
                     ATIMEKEGYTALVTAHHADDQAETVFMRLIRGGRLRHLSAIQPTQPFATGELIRPLLS
                     FKKADFEKLFHFEDCSNADFKYFRNRVRNDYLPKLKQENPKIELTLNNLAVDTNNLFQ
                     ALRDLTQDLSVTDVMSFQQQTPAVQSYLLEEYLEKFPDLQLPRPQFNEVLHILRSKAN
                     YYHLLKNDYMLEKDYHRFQIYKIGPETDSQPEKIMIKSEGIFSYGSYIFSLNHPLEEA
                     DSILYFPTENPIVVRRRQAGDTILINGINKKLRRWFIDNKISQKVRQNALIIEQNGEI
                     YGITNLVSSDLSKSVKNDIIKATLYIKMKE"
     gene            10409..10951
                     /gene="hpt"
                     /locus_tag="U1041_001482"
     CDS             10409..10951
                     /gene="hpt"
                     /locus_tag="U1041_001482"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEM4768587.1"
                     /translation="MLDKDIKKILVSEEEIVAKCKELGQILATDYADKNPILVGILKG
                     SIPFMAELMKHIDAHVETDYMVVSSYHGGTESSGTVKIIKDLDNSVAGRHIIFVEDII
                     DTGRTLKELKELFALRQAASIKIATLLDKPEGRVVEIEPDYTCFTIPNEFVVGFGLDY
                     DENYRNLPYVGVLKEEVYTK"
     gene            10973..12946
                     /gene="ftsH"
                     /locus_tag="U1041_001483"
     CDS             10973..12946
                     /gene="ftsH"
                     /locus_tag="U1041_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEM4768588.1"
                     /translation="MNNQPNKGFIKNPFLIILVIATIVTAFQFFNAGQQVATQEISYS
                     QVVTELKNNNVSEITYQPNSSVIEITGKYKTEQEAKDELASSIKLFQVSSKVKYKNFK
                     SLILPSETNLSELQALANENGVKVTIKPESSNGLWLNIVFNLLPLIIAGVFFMMMMNQ
                     GGGGARGAMNFGRNKAKALEQSNIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLG
                     ARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFED
                     AKKAAPAIIFIDEIDAVGRQRGVGMGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAAT
                     NRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAADVDLKLVAQQTPG
                     FVGADLENVLNEAALVAARRNKTVIDASDIDEAEDRVIAGPSKKDRQVSAKEREIVAY
                     HEAGHTIVGLVLSNAREVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMG
                     GRVAEEIIFNTQTTGASNDFEQATQMARAMVAEYGMSEKMGPMQYEGSHAMFAGQTTQ
                     KHISEQTAYELDNEVRDLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSVQIKSL
                     YETGKMPENIERDDEDVHPLSYEEVKEKINTKE"
     gene            13298..13768
                     /locus_tag="U1041_001484"
     CDS             13298..13768
                     /locus_tag="U1041_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4768589.1"
                     /translation="MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLE
                     AQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKRKFDRMPHEDIHELSHAIQSPGL
                     INDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR"
BASE COUNT         4709 a         2346 c         2856 g         4019 t
ORIGIN      
        1 gagttctttc ccactccctt ttatgttata ctaaaaaata gcacctagct tatttttata
       61 tatttagtga tggggaataa atgacgttat atatattagc taatcctaat gctggtagcc
      121 acactgctga acatatcata ttcaaaataa aagaaagtta tccacagctt gcagttaaca
      181 tttttatgac agttggtcct gaggatgaaa aaagtcaaat agaggctatt ttaaaggagt
      241 ttgtcagtag tgaggaccaa ttaatgattt taggcgggga cggtacacta tctaaagctt
      301 tgcgtttttg gccagctagt ctaccgtttg cttattatcc aacaggatct ggaaatgatt
      361 ttgctaaggc aatgaatata acatcgctct atagaagtgt agatgccatt ttagagggaa
      421 aaacaagtcg gatatatgtt ttaaacagtt catacggaac ggttgtaaac agtatggatt
      481 ttggctttgc agctcaagtt atcaatggtt caacgaattc aattttgaaa aaaattctga
      541 acaaggtaaa acttgggaag ttaacttatc tattctttgg tattaaaaca ttattttcaa
      601 aacaagctat aaacttagaa ttaactcttg atgaaaaatc ttatcagtta gctaatctct
      661 tttttatttc tgtagcaaat agtctttatt ttggtggagg aatcatgata tggccaacag
      721 caagtgctaa aaagaaggaa gtagatattg tttacttcaa aaatggaaat ttctaccaac
      781 gtctacaatc attgttagcc ttattaacga agaggcatga atcttctcat acaattcagc
      841 atttaacagg ggtagatgta gttttaaaat caaaagaaaa attgttattg caaatagatg
      901 gagagacatg cactgcaaat gaggtaacgt taacctatca ggaaagaagt atgtatcttt
      961 aaggaggaag tatgtatcaa ttaggatcat ttgtcgaaat gaaaaagccc cacgcctgtg
     1021 ttatcaaatc gaccggtaag aaggctaata agtgggaggt tatccgtcta ggagcggata
     1081 ttaaaatccg ctgtaccaac tgtgaccatg ttgttatgat gagccggcat gattttgaac
     1141 gaaaaatgaa acaagttctg ccgagtgaag cctagttgac agtttgcaac tgctggttgc
     1201 gattttttcc taaaaagtgc tagtcaacta ttcctttcta agctataata gacttagaaa
     1261 aaagaggagg acaagaccat gaagcagtta gcacaacaaa tcaagaattt acgcacaacc
     1321 aagaacctat ctcaagatga gttggcagag aaactctata tttcccgtca ggctgtttcc
     1381 aagtgggaaa atggcgaagc aacgccagat attgacaaac tggtccagct agcagaaatc
     1441 tttggtgtta gtctggatta tctggtttta gggaaagaac ctgagaagga aattgtggtg
     1501 gaacaacgag gaaaaatgaa tgtttgggag tttcttgcta attattggtg ggttcttatc
     1561 ccaatcatga taatagcctt tggcttattt gctgcagcga tgagaatttt gcagaaattt
     1621 tgataaatct tacaatcctg tcatttggca ggatttttct catcttttct gctataatag
     1681 tcatgattga atttttaatt ggagagtaaa aaaacatggc tttaacagca ggaatcgtcg
     1741 gtttaccaaa cgttggtaaa tcaaccctat ttaacgcaat taccaaggca ggagcagagg
     1801 ctgcaaacta ccctttcgcg accattgatc caaacgtcgg catggtagaa gtgcccgatg
     1861 agcgtttgca gaagttgaca gaactcatca cccctaaaaa gacagtccca acgacttttg
     1921 aatttaccga tattgccggt atcgtaaaag gtgcctctaa aggtgaggga cttggaaaca
     1981 aattcttggc caatatccgt gaggttgatg ccattgtcca cgtggtgcgt gcctttgacg
     2041 atgaaaatgt catgcgtgaa caaggccgtg aagacgcctt tgtggatcca atcgcagata
     2101 ttgatactat taacctagaa ttgattttgg cggatctaga gagtatcaac aagcgttatg
     2161 cgcgtgtaga aaaaatggcc cgtacgcaaa aagacaagga ttctgtggca gaatttgcag
     2221 ttcttgaaaa aatcaagcct gtcttggaag atggaaaatc tgctcgtaca gttgacttca
     2281 ccgatgaaga acaaaaaatc gttaagcaac tcttcctctt gaccaccaag ccagtcctct
     2341 atgttgccaa cgtcgatgaa gacaaggtag cagatcctga gtctatcagc tatgttcagc
     2401 aaatccgtga ctttgcggca acagaaaatg cagaagtggt ggtgatctct gcgcgtgctg
     2461 aagaagaaat ttcagaacta gacgatgaag acaagggtga gtttttggaa gcacttggat
     2521 taacagaatc tggcgtggat aaattgaccc gtgcagccta tcacttgctt ggtctaggca
     2581 cctactttac agcaggagag aaggaggttc gtgcttggac cttcaagcgt ggcatgaaag
     2641 cccctcaatg tgctgggatc atccactcag acttcgagaa aggctttatc cgtgccgtaa
     2701 ccatgtccta tgatgatttg attcaatacg gctctgagaa ggctgttaaa gaagcaggac
     2761 gccttcgtga agaaggaaaa gagtatgtgg ttcaagatgg ggacatcatg gagttccgct
     2821 ttaacgtttg atggctaaac tgtccttatt cttcgttgtt ttaccttgcc ataccatcag
     2881 tattgtctgc ggtttcaacg cctagactaa gaacagttta tcgcatcaaa gaggatgatt
     2941 acttggttgg aaagcatttt ccagcctttt ggtatttaag gagaaaaaat gacacgattg
     3001 atcatcggtc tgggaaatcc cggagaccgt tattttgaaa caaaacacaa cgttggcttt
     3061 atgttgctgg ataagattgc caagcgtgaa aatgtaattt ttagtcacga taaaattttt
     3121 caggcggata ttgcaaccac ctttattgac ggtgaaaaag tcttcctagt taaaccaacc
     3181 acctttatga atgagtcagg taaggctgtt catgccctga tgtcttatta tggtttggat
     3241 gagaccgata ttctggtggc ttacgatgat ttggacatgg cagttgggaa aatccgtttc
     3301 cgtcaaaaag gctccgcagg tggccacaat gggattaaat ccattgtcaa gcatattgga
     3361 acacaagaat ttaatcgtat taagataggt attggtcgtc caaaaggaaa gatgagcgtt
     3421 gtcaaccatg tcttgtctgg ctttgatata gaagaccgca tcgaaattga cttggcctta
     3481 gacaaacttg acaaggctgt caacgtatat ctcgaagaag atgattttga tacagtaatg
     3541 agaaagttta acggataatg aatatactcg atttacttca caagaacaag caaatcaatc
     3601 agtggcagtc tggcttaaac aagtcaaccc gccaactatt attaggactc actggaacca
     3661 gtaagtcatt agtcatggcg actgcctatg attgtttggc cgaaaagatt atgattgtga
     3721 ctgctactca aaatgatgct gagaaattag ttgcagattt aacagccatt attggaagtg
     3781 agaatgttta caactttttt acagatgata gtcctattgc cgagtttgtt tttgcatcaa
     3841 aagaacgaac tcagtcaaga attgatagtt tgaatttttt gaccaatgca actcaatcag
     3901 gaattttagt tgctagtatg gctgcttgtc gggtcttatt gccgagtcct gagacttata
     3961 aaggttctaa aatacagctt gaagttggtc aagaaataga agttgacaaa cttgtaaaga
     4021 atcttgtcaa catcggctac aaaaaagtgt ctcgtgtatt aacccaggga gaatttagcc
     4081 aacgaggtga tatcctagat atttttgaca tgcaagcaga agctccttat cgaatagaat
     4141 tttttggaga tgagattgat ggtattcgta tctttgatgt tgacagtcaa aaatccttag
     4201 aaaatctaga cgaaatctcg atctctccag cttccgatat cattttgtct tcagaagact
     4261 atagtagggc tagccaatac attcagacag ctattgaaca atcgacccga gaggagcaac
     4321 agtcttactt acgagaagtc ttagctgata tgcagacgga gtaccggcat ccagatttac
     4381 gtaaattctt gtcctgtatc tatgaacaat catggacatt gttggattac ttgccaaaga
     4441 gttctccctt atttttggat gattttcata aaatcgctga taagcaggct caatttgaaa
     4501 aagaaattgc agatttattg acagatgatt tacagaaggg taaaacagta tcaagtttga
     4561 aatattttgc ctcaacttac gctgaattga gaaaatacaa acctgccacc ttcttttcaa
     4621 gttttcaaaa aggtttaggc aatgtaaagt ttgatgctct ttatcaattc acacagtatc
     4681 ctatgcagga atttttccac cagattccac tgttaaaaga tgaattgact cgatatgcga
     4741 aatcaaacaa taccgttgtt attcaagcga gttctgatgt aagtttacat actttacaga
     4801 aaactttaca agagtatgat atccatcttc cagtacatgc agcagataag ttagtagaag
     4861 gtcagcaaca ggttacgatt ggtcagttag cttcaggttt tcatttgatg gatgaaaaac
     4921 tagttttcat cactgaaaaa gagattttca ataagaaaat gaagcgtaag acacgtagaa
     4981 ctaatatttc taacgctgaa cgtattaagg actatagtga attagcagtt ggtgactatg
     5041 ttgttcacca tgttcatggt atcggtcaat acctaggaat tgagactatt gaaatttcag
     5101 gcattcatcg tgattattta acggttcaat atcaaaactc cgatcgcatt tctattcctg
     5161 tagaacaaat tgatcttctc tccaaatact tagcgtccga tgggaaagct ccaaaagtta
     5221 ataaactaaa cgatggccgt ttccaacgaa ccaagcaaaa agttcagaag caggtagagg
     5281 atattgcaga tgatttgatc aagctttacg ctgagcgtag ccagttgaaa ggctttgcct
     5341 tttcaccgga cgataacaat caagttgaat ttgacaacta ctttacacat gtggaaacag
     5401 acgaccaact ccgttccatc gatgaaatca aaaaagacat ggaaaaagac tctccaatgg
     5461 atcgtttgct ggtaggagat gtcggctttg gtaagacaga ggtagctatg cgcgctgctt
     5521 tcaaagctgt caatgatggc aagcaagtag ctattcttgt acctacgact gttttagccc
     5581 agcaacacta tgctaatttc caagaacggt ttgcagaatt tcctgtcaat gtggatgtta
     5641 tgagtcgttt taaaacaaag gcagagcagg aaaaaacact tgagaagttg aaaaaaggcc
     5701 aagttgacat cttgattggt acccatcgcc ttctatcaaa agatgttgtt tttgctgatt
     5761 taggtttact ggttattgac gaagagcaac ggtttggtgt caagcataag gaacgcttga
     5821 aggaactgaa aaagaaaata gatgtcctaa ccttgactgc aaccccgatt cctcggacat
     5881 tgcaaatgtc catgctggga atccgcgact tatcagtaat tgagactcca ccgacaaatc
     5941 gctatcctgt acaaacttat gtgatggaaa caaatccttc cgttatccga gatgcaatgc
     6001 ttcgagagat agatcgcgga ggtcaggttt actatcttta caataaagtt gacaccattg
     6061 aacagaaagt gtctgaatta aaagaattgg ttccagaagc tactatagga tacgttcatg
     6121 gacaaatgtc ggagatccaa ttagaaaata ctctatatgc ctttgtagag ggtgagtatg
     6181 atattctagt gaccacaaca atcattgaaa ccggtgttga tattccaaat gctaatacac
     6241 tgtttattga aaatgcagat catatgggac tgtcaactct ttatcaactt agaggacgtg
     6301 ttggccgttc cagtcggatt gcctatgcct atctcatgta ccgtccagac aagtccttga
     6361 cagaagtagc tgaaaaacgt ttggaggcaa tcaagggctt tacagaacta ggatcaggtt
     6421 tcaagattgc tatgcaagat ttgtctattc gtggtgcggg aaatatttta ggtgctgctc
     6481 agtcaggttt tattgactct gtgggatatg agatgtattc acaattgctg gaacaagcca
     6541 tcttggaaaa acaaggtaag gtaacccaac gtcagaagag taattcagag gtcaatttac
     6601 agattgatgc ctatttacca agtgattata ttggtgatca gcgacaaaaa atcgaaattt
     6661 acaagcgtat aaagaatatt gacagtcgtg taaactatca agaattacag gaagaattga
     6721 ttgaccgttt tggagagtat cctgatgtag tagcctactt gcttgaaatc ggtctattga
     6781 agtcattttt agaccaagtt ttctgtcata cagttcttag acgccaacat caagtgacag
     6841 taacattcga acctatggct ggtcaaattt tcctaacgca agattacttt gaagctttat
     6901 ctgtgacaaa tttgaaagct cagataacgg aaaataaagg aaaactagct gttgtgttta
     6961 acattcaaca gaaaaaagaa tatgaaatat tagaggaatt gatttctttt gccgaaaaat
     7021 taaaagaaat taaagcaagg aaagcagaat aaatttctca attaaatgaa aaaatggtaa
     7081 aatatatagt tgaggtaaag tatgagacta gataaatatt tgaaagtatc ccgcattatc
     7141 aagcgtcgaa cagttgcgaa ggaagttgcc gataaaggac gaataaaagt caatgggatt
     7201 ttggcgaaat cttcaacaga tttaaaagta aatgatcagg ttgaaatcca atttggtaat
     7261 aaactactca ctgtaaaagt acttgaaatg aaagattcga ctaaaaaaga agacgcactg
     7321 aaaatgtatg aaattatcag tgaaaaaagg atagaaaaag atgaagaaat ctaaaattct
     7381 acaactgaat aatgccttta ttcagtcgga gcgtaaaaaa actcagcatc aattggcaga
     7441 acgccaacaa aaaaatcgtt ttatgggtgc aattctcatt ctagttatct ttctttttat
     7501 gttgcctgcc tataatcttg ttgggactta cactaatatt cagcagcagg aaaagaaact
     7561 tgctgaattg gaaaaaaatt acgaagaact gaccaaagaa cagcagcagg aagcagagat
     7621 ggttgcaaaa ttgaaaaatg aggaatacgc agcaaagtat gttcgggcta agtatcaata
     7681 ctctaaagaa ggggaatttg tctacaatat tccagggtta ccaaaatgac cgaatctatt
     7741 tttaaaattg tagagcaatt tttacagcat tctgatgaaa aattagaaga gttgaatcaa
     7801 aagaatagag aattaaagtt agaagaaaat gaatcgtaga aaggagggag tatgcagaag
     7861 aaactgctcg tatggttatt gccagtttta tttggatggc aggtggtcga tagtacagaa
     7921 ataccatttg aactcacagc gcaagaagaa tacgaattga ctcatactat ctatgatcag
     7981 tattttcaaa ctatccctca aaacccaaat gtttttcaaa ctgagaatct ttattcggat
     8041 gaagaactga ctatagcagg tggacaatta cagccgaacc aacatttttc tattacggat
     8101 gttctagtca atagcaaaaa agaattggtt ttccaaatag atgacaaggg ttacattctt
     8161 gcaagtaggc atctactatt tgatgatgta attgttacag aaactactgt tgagcaaact
     8221 tattggacaa aaaaaggttt cacattgtta acctcaccaa ttgctaacga agctacggaa
     8281 ataaaaaatg atttacaacc ctatcaagct gttatggttt ctaaaattgt gacaacttcc
     8341 ctaggtgatt ttgcctatgt tacagataaa ggttggattg cagtaaataa tctttctaaa
     8401 acggataata gagtagaagc cgttcaagag ttgttgacta acaaatattc caaagatact
     8461 attggtatat atgtgaaaca attgtcaaca ggtcaaactg caggtgtaaa tcaagagaaa
     8521 ctattctatt ctgccagcat tgctaaacta ccaattcttt attacgttca agagcaactg
     8581 aatgctgggt acattgattt gactactaaa gtgaaatata cagccgaatc tatgtccttc
     8641 ccaggagctt atgctgctgg aggaagtggt tcactgtcaa aaactcctga caataaagat
     8701 tattcagtgg aagaattgat caataagact gctaaagagt cagataatgt agctagtaat
     8761 ttactttctt attatgtagc taataaattc gattccaatt tttatcaagt aataactgct
     8821 aaaacaggta gtgagtggag tatggttaca cgtgaaactt cagctgagat cgcagggaaa
     8881 acgatggaag ccttatatat tcaaaatggc tatgtgctag aaagtttgtt atctactcaa
     8941 tttgataatc aacgtatttc gaaagacatc tcagttccag ttgctcataa aattggcgat
     9001 gcagacgatg tcaaacacga tgtagcgatt gtttacgcag agtctccttt tgttttatct
     9061 atttttacag ataaatcaaa ttatgatgag attacacaaa ttgcaaatga tatttacggg
     9121 attttaaagt aaatgaaaga tagattttta aaagtgacac tggatggtca cttttttgat
     9181 aaacataaga aagtactagt agccgtatct ggtgggttag attctatgaa cctattccat
     9241 cttttatacg aatgcaaaca agtgttaggg attgaacttg gaattgccca tattaatcat
     9301 ggacagagag aagaatctgt cattgaggaa aaatatctta gacagttagc agaagaaagt
     9361 aatgttccct tttatctgtc ctattttgaa ggtgtttttt cagaagaatc ggcgcgaaaa
     9421 tggcgttatg gattttttgc tacaatcatg gagaaggaag gctacactgc actagtgaca
     9481 gcccaccatg cagatgatca agcagaaact gtctttatgc gattgattag aggagggcgt
     9541 ttacgtcact tatcagcaat tcaaccgact cagccttttg caacagggga acttattcga
     9601 ccacttttat cttttaaaaa ggcagatttt gaaaagctat ttcattttga agattgcagc
     9661 aatgcagatt tcaaatattt tcgaaataga gtcagaaatg actatttacc aaagttaaaa
     9721 caggaaaatc ctaaaatcga acttactctc aataatcttg cagttgatac aaataatcta
     9781 tttcaagcgc taagagattt gacacaggat ttatccgtta cagatgtgat gagttttcaa
     9841 caacagacac ctgcggtaca aagttatcta ttagaggaat atttggaaaa atttcctgat
     9901 ttacagctcc ctcgtccaca atttaatgaa gtattacaca tcttgcgttc aaaagctaac
     9961 tactatcatt tattgaaaaa tgattacatg ttagagaagg attatcatcg ttttcaaatt
    10021 tataaaatag gaccagagac ggatagtcaa ccagaaaaaa tcatgataaa atcagagggt
    10081 attttttctt acggttcgta tattttttct ctcaatcatc ctttggaaga agcggatagt
    10141 attttatatt ttcctacaga aaatccaatt gtagtgagga gaaggcaggc tggggatacc
    10201 attttaataa acggaataaa taaaaaactc cgccgttggt ttattgataa taaaatctca
    10261 cagaaagttc gacaaaatgc gcttattatc gagcagaatg gagaaattta tggaattacg
    10321 aatcttgtta gcagtgattt gagtaaatca gtaaaaaatg atataatcaa agctacctta
    10381 tatataaaaa tgaaagagta gaacaactat gttggacaaa gatattaaga aaattcttgt
    10441 ttcagaagaa gaaatcgttg caaaatgcaa agaactcggt caaattctag caacagacta
    10501 tgcagataag aatcctattc ttgtaggaat tttaaaaggt tctatcccat ttatggcaga
    10561 attaatgaaa catattgatg cccatgtaga aacggattat atggttgttt ctagctacca
    10621 tggcggaacg gagagtagcg gtaccgttaa gattatcaag gatttggaca atagtgttgc
    10681 aggtcgacat atcatcttcg tagaggatat tattgacact ggtcgtacat taaaagaatt
    10741 gaaagaactc tttgctttgc gtcaggcagc ttctattaaa attgccactc ttcttgataa
    10801 accagaaggt cgtgttgttg aaatcgagcc agactacact tgctttacta ttccaaatga
    10861 atttgtagtt ggatttggct tagattatga tgaaaactac cgtaatcttc cttatgttgg
    10921 tgtactaaaa gaggaagttt atacaaaata gaaaaaggtt tcctactata ctatgaacaa
    10981 tcaaccaaat aaaggattta taaaaaatcc ttttctcatt attctcgtta ttgccactat
    11041 tgttacagcc tttcaatttt ttaacgctgg tcagcaagta gcaactcaag aaatcagtta
    11101 ttcacaagta gtaactgaat tgaaaaataa taatgtatct gaaattactt atcaaccaaa
    11161 ttcaagtgtt attgaaatta ctggtaagta caaaacagaa caggaagcta aagatgagtt
    11221 agcttcatct attaagttat tccaagtttc tagtaaagtt aagtataaaa actttaaatc
    11281 actaatttta ccgtcagaaa cgaatttgtc agagctacaa gctcttgcaa atgaaaatgg
    11341 agtaaaggtt actattaaac ctgaaagttc aaatggactt tggttaaata tcgtctttaa
    11401 tttgttaccg cttatcattg ctggtgtatt cttcatgatg atgatgaacc agggtggtgg
    11461 cggagctcga ggtgccatga attttgggcg aaacaaggca aaagctcttg agcaaagcaa
    11521 tatcaaagtt cgtttctcag atgttgcagg tgcagaagaa gaaaaacaag aattagttga
    11581 agttgttgaa tttttgaagg atccaaaacg ctttactaaa cttggagcac gtattccagc
    11641 aggtgtgcta ctagagggtc ctccaggaac aggtaaaacc ttgcttgcaa aagcagtagc
    11701 gggtgaagcg ggtgtgccat tcttctccat ttctggttca gattttgttg aaatgtttgt
    11761 tggtgtcggt gccagccgtg ttcgttcatt atttgaagat gcaaaaaaag cagcaccagc
    11821 cattattttc atcgatgaaa tcgatgctgt cggtcgccaa cgtggtgtcg gcatgggtgg
    11881 tggtaacgat gaacgtgaac aaaccctcaa ccaactctta attgaaatgg atggttttga
    11941 agggaacgaa gggattattg tcattgccgc aaccaaccgt agtgatgttt tagaccctgc
    12001 ccttcttcgt ccaggtcgtt ttgaccgtaa agtattggtt ggtcgtccgg atgttaaagg
    12061 acgtgaagca atccttaaag ttcatgcgaa gaataaacca ctagcagcag atgtagattt
    12121 gaaattagta gcacaacaaa caccaggatt tgttggtgca gatttagaga atgttcttaa
    12181 cgaagcagcc cttgtagctg cacgtcgaaa caagactgtc attgatgctt cagatattga
    12241 cgaagcagaa gatcgtgtta ttgcaggtcc atctaagaaa gaccgtcaag tttcagccaa
    12301 agaacgcgaa atcgttgcct accatgaagc aggtcataca attgttggtc tcgtactatc
    12361 aaatgcacgt gaagttcaca aagtaacaat tgttccccgc ggtcgcgcag gtggatacat
    12421 gattgccctc cctaaagaag atcaaatgct tctttctaaa gaagatatga aggagcaatt
    12481 ggctgggctt atgggtggtc gtgtagcaga agaaattatt ttcaataccc aaacaaccgg
    12541 tgcctcaaat gactttgagc aagctacaca gatggcgcgt gctatggttg cagaatatgg
    12601 tatgagtgaa aaaatgggac caatgcagta tgaaggcagt catgcaatgt ttgctggaca
    12661 aacaactcaa aaacatattt ctgagcaaac tgcatatgag ttagataatg aagtacgtga
    12721 tttgttaaat gaagctcgca acaaagcggc tgaaattatt caatctaatc gcgaaactca
    12781 taaattaatc gcagaagcat tgctcaaata cgaaacccta gacagtgttc agatcaaatc
    12841 tctctatgaa acaggcaaaa tgccagaaaa tattgaacgt gatgatgaag atgttcatcc
    12901 cctttcttat gaagaggtaa aagagaaaat taatacgaaa gagtagtata aaaatggtct
    12961 gtgcaagaca ttccataacg gatctgccct cactctcaac cactaaaata accacaaagc
    13021 cttcgctaag tacataatct tggcgagggc ttttttacat gatacacatc agaaacaggg
    13081 catttacaag aaaaacgaat caatagttat ttatctcaat ctaagaacta taccaaataa
    13141 ctcccttctg aagcagaatg caatatttgc catagagtat caatagcaaa tgtactttaa
    13201 aaaagaaaaa tcaaataaag tatgctagac aaaaatgtcc tgtagaaaga cagcactttt
    13261 cgataaactt aaaccatcaa caaaaggaga ttaagaaatg gaattcgaaa aagtgtacgc
    13321 aagcgtcaaa ggtattgtaa acaaggctcg aaaagagttt tacattaaac tatgggatcg
    13381 agatgattgg gaacaagaag gaatgatgac cttgtttgaa ttgttggaag ctcaaccgtg
    13441 gctagttgat gaacaagttc aattatattg ttattttaaa gtcaagttca gaaatcgcat
    13501 caaagatcgt atccgcaaac aggaaagtca aaaacgcaag tttgaccgaa tgccacatga
    13561 agatattcac gaattatctc atgcaataca atcaccggga ttgataaacg atgaactatt
    13621 aatgttgaga ggtgccttga gagattatcg aaaaaatctg agcaatgatc aacttgataa
    13681 atacgaaaaa ttaattagcg gacaatgttt taatggtcgt cgtgaaatga tacgtgattt
    13741 acaaattcat ttgaaagact ttcgctaaag ctagtcacta acattatgtt aatcgaatta
    13801 agaaattggg cagaagcacc ataaaaagtt ctgttcagtt tctttttata taggttatag
    13861 cacaggaaga aggaatagga gaaaaaacaa agtatctaca tagaactttt agtgtaaaaa
    13921 atcccaaaaa
//
LOCUS       DASFQS010000060        13748 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.062, whole genome shotgun sequence.
ACCESSION   DASFQS010000060 DASFQS010000000
VERSION     DASFQS010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13748
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.062"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(14..1285)
                     /locus_tag="U1041_001485"
     CDS             complement(14..1285)
                     /locus_tag="U1041_001485"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEM4768590.1"
                     /translation="MLVVKNGRVLDPQSGLDKVCDILMDGSKIVKIAESISEDAEQEV
                     IDATGLVVAPGLVDVHVHFREPGQTHKEDIHTGALSAAAGGFTSVVMMANTNPTISNV
                     ETLKEVLDSAKKEAIHIYSVATITDHFDGQNLTDFPALLEAGAVAFSDDGIPLTNAGV
                     VRKAMKLAKEQGCLISLHEEDPDLNGVLGLNEQVAEKHFHVCGATGVAEYSMVARDVM
                     IAYETGARVHIQHLSKAESVKVVEFVQGLGANVTAEVAPQHFSRTEDLLLTKGANAKM
                     NPPLRLESDRLAVIEGLKSGVISVIATDHAPHHVDEKNVEDLTQAPSGMTGLETSLSL
                     GLTHLVEEGHLTLVQLLEKMTINPAKLYGLDAGYLAENGPADLVIFDPNANRLVTADF
                     ASKSANSPFVGDSLKGQVLYTIANGQIVFGK"
     gene            complement(1315..1968)
                     /locus_tag="U1041_001486"
     CDS             complement(1315..1968)
                     /locus_tag="U1041_001486"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001841111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEM4768591.1"
                     /translation="MEHSAWHELIKAQLPEHYFGKINQFLDHVYVGGTIYPPREKVFA
                     AIQTTDLEEVKVVILGQDPYHGPGQAQGLSFSVPNSVPAPPSLQNILKELTDDIGVKQ
                     DHDLTAWAEQGVLLLNACLTVPADQANGHAGQIWEPFTDAVIKVVNSLDQPVVYILWG
                     AYARKKKALITNPNHLIVESAHPSPLSAYRGFFGSKPFSQANAFLRSKGSSEIDWLR"
     gene            complement(1978..2904)
                     /locus_tag="U1041_001487"
     CDS             complement(1978..2904)
                     /locus_tag="U1041_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4768592.1"
                     /translation="MISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKD
                     GTLTVLRQLSGQDRAVRYLSFSRNFGKEAALYAGLQAAQGELVTVMDVDLQDPPEMLM
                     EMKAMLDGNPDLDCVGTRRVSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLM
                     RRHMVEAILAVSEYNRFSKGIFAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEG
                     IINFSDTPLNIASYTGFFTFLLSLVLMVFVVFKTLVFGDPTIGWPSTICIILFLGGLQ
                     LMTIGILGKYLAKVFLETKKRPIYIVKEKSSN"
     gene            complement(3013..3645)
                     /locus_tag="U1041_001488"
     CDS             complement(3013..3645)
                     /locus_tag="U1041_001488"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEM4768593.1"
                     /translation="MTLATEIASHLLDIKAVHLRPEKPFTWASGIKSPIYTDNRITLS
                     YPETRNLIEDGFVQRIEEEFPEVEVIAGTATAGIPHGAIIADRMNLPFAYIRSKPKDH
                     GAGNQLEGRIVKGQKMVVVEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAD
                     RNFDNAGVKLVTLSNYSELIKVAKVQGYINADGLNLLKKFRQNQETWQED"
     gene            complement(3783..4109)
                     /locus_tag="U1041_001489"
     CDS             complement(3783..4109)
                     /locus_tag="U1041_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEM4768594.1"
                     /translation="MDKIYQIIIDRPIGYIDKFGNQYPINYGYVPNLLAGDGEEQDVY
                     IISKAVRQPLTAFEGKLVAIIHRRDDVEDKWVLTGLDEKLTVTEIKEKTNFIEQYFDS
                     WIEMVD"
     gene            complement(4102..4836)
                     /gene="pyrF"
                     /locus_tag="U1041_001490"
     CDS             complement(4102..4836)
                     /gene="pyrF"
                     /locus_tag="U1041_001490"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEM4768595.1"
                     /translation="MKENRPIIALDFAGREEVETFLKEFPAQEKLYVKVGMELYYAEG
                     PSIISYLKDCGHSIFLDLKLHDIPNTVESAMKVLAKLGVDMTNVHAAGGVEMMRAARR
                     GLGKDAVLIAVTQLTSTSEEQMRTDQNIQTSLQEAVVHYAQRAQEAGLDGVVCSAHEV
                     ALIKDATSSDHEVALIKDATSSDFVCLTPGIRPTGGEVGDQKRVMTPADAARIGSDYI
                     VVGRPITKSEHPYQTYLSIKEEWNRG"
     gene            complement(5001..5942)
                     /locus_tag="U1041_001491"
     CDS             complement(5001..5942)
                     /locus_tag="U1041_001491"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEM4768596.1"
                     /translation="MTKRLAISLPGLDLKNPIIPASGCFGFGQEYADYYDLNQLGSIM
                     IKATTRHPRYGNATPRVAETPAGMLNAIGLQNPGVDVVLSEKLPWLEQHFPDLPIIAN
                     VAGFSNEEYAYVSGKISQAPNVKAIELNISCPNVDHGNNGLLIGQVPELAYQAVKAAV
                     EASSVPVYVKLTPSVADITLLAKAAEDAGATGLTMINTLVGMRFNLKTRQPILANGTG
                     GMSGPAVFPVALKLIRQVAQMTDLPIIGMGGVDTADKAIEMMVAGASAIGVGTANFTD
                     PFACPTIIKDLPERMDVYGIDTLENLRQEVRESLGKR"
     gene            complement(5952..6842)
                     /locus_tag="U1041_001492"
     CDS             complement(5952..6842)
                     /locus_tag="U1041_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HEM4768597.1"
                     /translation="MINRANTAFFSCNLASQQGFFSISTFLFSVSLLYRIGEKMILKE
                     QMLLVDQVQLAPRIFAMTLQGDMVQDMKMGQFIHIRVPDDSMLLRRPISISEIDRNKS
                     QCRIIYRVEGQGTEVFSKMTVGQVLDVMGPLGKGFEVDFLKEGDRILIIGGGIGVPPL
                     VEVAKQAANRGAKVTSVIGFATKEAVILEEELAKYGQVYVTTDDGSYGRKGNVATVVE
                     ELTNEFAAIYSCGAPAMMNYVDQRFQEHPHAYISLEARMACGMGACYACVVKPKEGQE
                     HENKRVCKEGPVFATGSLIL"
     gene            6939..7850
                     /locus_tag="U1041_001493"
     CDS             6939..7850
                     /locus_tag="U1041_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM4768598.1"
                     /translation="MRIQQLYYIIKIAETGSMNEAAKQLFITQPSLSNAVRDLEKEMK
                     IKIFFRNSKGITLTKDGMEFLSYARQIVEQTELLEDRYKNPNAKRQLFSVSSQHYAFV
                     VNAFVSLLKETEMEDYELFLRETRTWEIIDDVKNFRSEIGVLFLNHFNRDVLLKLLDD
                     NRLSYTTLFTAKPHVFVSKTNPLAQRKSITLDDLVDFPYLSYEQGIHNSFYFAEEILA
                     QEHHKKSIVVSDRATLFNLLIGLDGYTIATGILNSNLNGDNIVSIPLEFDDEIELVYI
                     QHEKALLSDMGEKFINYLLEEVKFDQK"
     gene            8013..9140
                     /locus_tag="U1041_001494"
     CDS             8013..9140
                     /locus_tag="U1041_001494"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HEM4768599.1"
                     /translation="MAQNKMLAMILAGGRGTRLEGLTKKVAKPAVAFGGKYRIIDFPL
                     SNCANSGIDIVGVLTQYEPVLLNSYVAQSQRWGLDVQGSGVFVLPPSEKIEGFGLYKG
                     TADAITQNIDFIDLHDPEYVLILSGDHIYKMNYDKLLDTHIQKKADATIAVIEVPIKE
                     ASRFGIMNTDEDYRIEEFEEKPENPKSNLASMGIYIFTWKTLKKYLQEDDKLDTSSHD
                     FGHDIIPKYLEDGRTLIAHPFRGYWKDVGTVNSLWESNMDLIDHAGDLDLSDRSWRIY
                     SEDKGSPAQVIGATATVKSAYIDKGAVIDGTVEHSVISTDVQVNQNAVVKNSVVLPGA
                     IIGEGVELDYVIVAENIKIADGVKLTGDIDHILLIDKNVTK"
     gene            9153..10268
                     /gene="glgD"
                     /locus_tag="U1041_001495"
     CDS             9153..10268
                     /gene="glgD"
                     /locus_tag="U1041_001495"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase subunit
                     GlgD"
                     /protein_id="HEM4768600.1"
                     /translation="MLRNTLGIVNIEGNNVHFGDVMKHRGVQAFGFLGRYRLIDFALS
                     NMSNSGITEFQVYMPAEMRSTIQHVGTGKHYNINSKRGTLRLLNSATDPNSVYRHDIN
                     AFTENIHYIENSTKDYVLVAPSYFIYSQDFSKVMDDHIATDADITVLYKNVSDAKENF
                     IGCQTLKFGEDRRVVAFEENHGKYKNRPVSLEAYIMKRTTFIDLIKRANKVSSLYWLK
                     DILRDTVDQYKIMGYAHRDYVACINTTASYFNTQIELIDQDTRKLLFKHDWPIHTQTS
                     DSSPCLYGPLAEVKRSLISNGANINGQVENSVIDRDVIIEEGVVIKNSIILNGVTIKS
                     GANIENAIIDKATKIIHPIDIKGSETSPSYLKPHQII"
     gene            10277..11722
                     /gene="glgA"
                     /locus_tag="U1041_001496"
     CDS             10277..11722
                     /gene="glgA"
                     /locus_tag="U1041_001496"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEM4768601.1"
                     /translation="MTKKSVLFVASEGLPFIKTGGLADVIGSLPKELVKQGLDVRVVL
                     PLYKKIAINNHADFDYVSSFDVRAGDIQSMANVYSQVVDGVTFYFIEHRDFFERDELY
                     GYDDDAMRFGYFQHATCRLLEALHFFPDVMHTHDWHTAALPFLCRTFYSYREEFRNIK
                     HVFTIHNLAFQGIFHKQALWSALGMDYSYYLDGIARFHDECISFMKLGILYADKVTTV
                     SETYAHEILTEEFGENMQHVLELRKYDLVGIVNGIDYDSWDSQTDQYLVRNYSLETIE
                     SKKANKLALQAQFALPQDENVLLIGIVSRLTWQKGFYLLTEVLGHLLQAHVQFVILGN
                     GEEDIENAFNHFKHAYPDKFAFYRGYNEPLAHQIYAASDLFLMPSMFEPCGISQLISM
                     HYGTLPLVRETGGLVDTVAPYNMSTKEGTGFSFGGRDAYNMRQVYDLALQTYYDRPDD
                     WYAMVEQAMKRDFSWTASAEKYIWLYREISG"
     gene            11795..13633
                     /gene="glgB"
                     /locus_tag="U1041_001497"
     CDS             11795..13633
                     /gene="glgB"
                     /locus_tag="U1041_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HEM4768602.1"
                     /translation="MTEFTDLDLYYMNAGEHTTLYEKMGAHIIKERNKIIGTQFRVYA
                     PNAREVFLVGNFNEWQRSHSMEREIDGVFQLYVDGLKSLEDYKYLIITHDGREIYKAD
                     PYAFFSQVRPDTASTTYNSRYKFKDDIWMYNRVNYDFKEQPVSIYEVHLGSWKQKFAN
                     KNEGGAPVEAFNSYKEITPLLIEHIRENNYTHIELLPITEHPLDASWGYQVTGYYSPT
                     SRYGKPDELKYLVDQCHQAGIGVILDWVPLHFCKDAHGLYQFDGSWLYEYSYEQDREN
                     HQWGTANFDLEKGLTRSFLLSNLKYWLEYFHFDGIRVDALSYLLYWRGETDEDKINHA
                     AIDFIKRVNAMVHTDYKGVLMIAEDSSSFPKVTHSLEDGGIGFDMKWDLGWMNDTLKF
                     VERPAIYRKYHSNEITFGMYYNQNEQFLLPLSHDEVVHGKHSIIEKMNGDYEDKFHLA
                     RVYYSFYFAHPGKKLLFMGNEWGHIREWHEYTEMDWGLLQFPIHHSFYQMMKTLSTFY
                     KEHDAFWKYDYQAYEKGFNWVKIDEEASLYAFSRTSDEQEILTIHNFNDQELFDVHLD
                     LPADSEYKLVFSSNAIPMDTFSLYPDENGARITVPRLTSFYLERVK"
BASE COUNT         4108 a         3102 c         2603 g         3935 t
ORIGIN      
        1 cagcctccat ttcctattta ccaaatacta tttgtccatt tgcaatggtg taaaggacct
       61 gtcctttcag actatcacca acaaacggag aattagcaga cttcgaggca aaatccgctg
      121 tgaccaaccg atttgcattt gggtcaaaaa taacaagatc agctgggcca ttttcagcaa
      181 gatagccagc atcaagacca tagagcttgg ctggattaat agtcattttc tccaacaatt
      241 gcacgagggt cagatgccct tcttccacca gatgcgtcaa accaagtgaa agcgaggttt
      301 ccaagcctgt cattcctgaa ggagcttgcg taagatcctc tacatttttc tcatctacat
      361 gatgaggtgc atggtccgtc gcaatgacag agataacacc agatttcaat ccctcaataa
      421 ccgctaatct gtcactttcc aagcgtaatg gcggattcat tttagcattg gcaccttttg
      481 ttagaagtaa gtcctcagtt cgtgaaaaat gttggggtgc tacttctgcc gtgacgtttg
      541 ctccgagacc ttgaacaaat tcaaccacct tgaccgactc ggctttggat agatgctgga
      601 tatgaacacg cgcacctgtt tcataggcaa tcatgacatc gcgagcgacc atgctgtatt
      661 ctgctacgcc agttgctcca caaacatgaa aatgtttttc agctacttgt tcgttgagtc
      721 ccaagacacc attcaggtca gggtcttctt catgcagact gatgagacag ccctgctctt
      781 tggctaattt catagctttt ctaaccacgc cagcatttgt caaaggaata ccgtcgtccg
      841 aaaaggccac cgctccagct tctagcaaag caggaaaatc ggtcagattt tgcccatcga
      901 aatgatctgt aatggttgcc acactataaa tgtgaatagc ttctttttta gcggaatcca
      961 atacttcttt taaggtttca acatttgaaa tcgtcggatt agtgtttgcc atcatgacaa
     1021 cagaagtaaa accacccgct gctgcagaaa gagctcctgt atgaatatct tctttatggg
     1081 tctgaccagg ctcccgaaaa tgcacatgaa catcaaccaa accaggagca acgactaatc
     1141 ctgtcgcatc aatcacttct tgctcagcat cttctgaaat cgactccgca atcttaacaa
     1201 tcttacttcc gtccatcaag atgtcgcaaa ccttgtctaa accggattgc ggatccaata
     1261 ctcgaccatt ttttactact aacattcaag ttctcctttt gtagtcaact tcatctaacg
     1321 caaccagtca atttctgaac ttccctttga acgtaaaaat gcatttgctt gtgagaaggg
     1381 cttgcttccg aagaaacctc gataggctga tagagggctt ggatgagcag attcgacaat
     1441 caaatggttg ggattggtaa tcagtgcctt tttcttgcga gcataagcac cccaaagaat
     1501 atagacaaca ggctggtcta agctattgac caccttaata acagcgtccg taaaaggctc
     1561 ccagatttgc cctgcatgtc catttgcctg atctgctgga acagttaaac aagcattgag
     1621 caaaagcaca ccttgttccg cccatgctgt caaatcatga tcttgtttga cgccaatatc
     1681 atccgtcaat tcttttaaaa tattttgaag agatggcgga gctggtaccg agttcggaac
     1741 agaaaatgac aagccctgtg cctgaccagg tccgtgatag ggatcctgtc ccaaaataac
     1801 tactttaacc tcttccaaat ccgttgtttg aatggcagca aataccttct cacgaggcgg
     1861 ataaatggtt ccaccaacat aaacatgatc taaaaactga ttaattttac caaaataatg
     1921 ctctggcaac tgtgccttta tcaattcgtg ccaagctgaa tgttccataa actgctccta
     1981 gtttgaactt ttctctttaa caatataaat cggacgtttc ttcgtttcca agaaaacttt
     2041 tgccaaatat ttaccgagaa taccaatggt catcaactgc agacctccca aaaataggat
     2101 gatacaaata gtcgacggcc agccaattgt aggatctccg aacaccaagg ttttgaaaac
     2161 cacaaaaacc attagaacta gcgacaatag gaaggtgaag aaacctgtat aggaggcaat
     2221 attcaaaggt gtatctgaaa aattgatgat tccttcaata gaataagaaa gcaatttcca
     2281 gaaagaccaa ctagtttcgc cagcgaccct ctcaacattt tcatagggca agtattctgt
     2341 ttcgaatcct acccaagcaa aaattccttt tgaaaagcga ttgtattcag acacagctag
     2401 aatggcctct accatgtgac gacgcatgag acggaaatca cgggcaccgt ctactacctc
     2461 gacctggctg attttattca tcaatttata aaataatttg gcaaaaaagc tacgaatcgg
     2521 tggctcacca tcacgactga cacgacgggt tccaacgcaa tctaaatctg gatttccatc
     2581 caacatagcc ttcatttcca tcaacatttc aggtggatct tgcaaatcaa catccatgac
     2641 agtcactagc tcaccttgcg cagcttgtag acctgcatag agagcagctt ctttcccgaa
     2701 attccttgaa aaggaaagat agcgaacagc tcggtcttga ccagacaatt ggcgtaaaac
     2761 cgttaatgtc ccatcctttg aaccatcatt gacaaaaata tactcaaatt gttcccccat
     2821 ctccttacga actttctcca tagcatcgta aaaataggga attgcctctt cttcattaaa
     2881 acaaggcacg ataactgaaa tcatgttttt ctcctcatac ggtcaattat tgtattctca
     2941 aaatacgtta gagactatta taccatttta caggataagt tcccagaaat cgtgcgtggg
     3001 ctcgttttaa atctagtctt cctgccaagt ttcttgattt tgacggaact ttttaagcag
     3061 attcaaacca tctgcattga tatatccctg tacttttgcg accttgatta actctgaata
     3121 attgctaagc gtcaccaatt tcacgccagc attatcaaaa ttacgatctg cctttggcaa
     3181 ttcataggta aagattgcca caacaccaat aacgtcagcg ccttcacgct cagctgctgc
     3241 tacggcatct agaacagacc ctccagtaga aatcaggtct tcaacgacaa ccattttttg
     3301 tcccttgacg atgcgaccct ctaattgatt ccctgcacca tggtcttttg gtttgctacg
     3361 gatatatgca aatggcaaat tcatcctatc tgcaatgata gcaccatgag gaatacctgc
     3421 tgtggcagtt ccggcaatca cctcaacctc aggaaattct tcttcgatac gctgaacaaa
     3481 gccatcttca atcaaatttc gagtttcagg ataagatagt gtaatacgat tatctgtata
     3541 gataggtgat ttgatccctg atgcccatgt aaatggcttt tctggacgca gatgaactgc
     3601 tttaatatcc aataagtgtg atgcgatttc tgttgctaat gtcataatag acctccttct
     3661 aaatgcgtac cattccaaca tgaccatccc gccgaatagc ctgtcactcc taaagtactg
     3721 gttcaatcta tgaaccctat aaaaaactat atttatccct gttgaattct tacagacttc
     3781 tcctagtcca ccatttcaat ccatgaatca aaatactgtt caatgaaatt ggttttctct
     3841 tttatttctg tcacggtaag tttttcatca agacctgtca gaacccattt atcctcgaca
     3901 tcgtctcttc gatggataat cgcgaccaat ttcccctcga aagctgtcaa gggctgccga
     3961 acagctttgg aaatgatgta aacatcttgc tcttcaccat ctccagccaa tagatttgga
     4021 acatagccgt aattgatggg gtactggttg ccaaatttat caatataccc gataggtcta
     4081 tcgattataa tctgataaat cttatccacg attccactcc tctttaatag acaaataggt
     4141 ctggtaagga tgttctgatt ttgtaatcgg gcgacctacc acaatgtaat cactaccgat
     4201 tcgagcagca tctgctggtg tcataactcg tttctgatcg cctacttcac cgccagtcgg
     4261 acgaatccct ggcgtcaggc acacaaaatc agaacttgta gcatctttaa tcaaagcgac
     4321 ctcatgatca gaacttgtag catctttaat caaagccacc tcatgagctg aacaaaccac
     4381 cccatcaaga ccagcttctt gtgctctttg agcatagtga acaaccgctt cctgcaaact
     4441 agtctgtata ttctggtctg ttctcatctg ctcctctgag gtagaggtca actgagtgac
     4501 cgctattaaa acagcatcct tacccaatcc ccttcgtgct gcccgcatca tctcaacacc
     4561 accagcagcg tgaacgttgg tcatatccac accgagtttt gccaagactt tcatagcaga
     4621 ctcgacggta ttaggaatat catgcagttt caaatctaga aaaatactgt gaccgcagtc
     4681 ttttaaataa gaaataatgc tcggaccttc cgcatagtag agttccatac ccacctttac
     4741 atagagcttt tcctgtgctg gaaactcttt taggaaagtt tcgacttctt ctcttcctgc
     4801 aaagtctaaa gcaataattg gacgattctc tttcataata tcctttcatt tacacaaaaa
     4861 tccctgccaa atcggtcagg gatgtgcacg aattcagctt gaaaatcacc tttcaagcat
     4921 attacatgac accttcctag cctctctgga cttaattaaa ggagatattt tctttatatt
     4981 actcttttat tttacctttg tcaacgctta cctaagcttt ctctaacttc ttggcgtaaa
     5041 ttttctaggg tgtcaatccc ataaacatcc atgcgttcgg gtaaatcctt gataatagtt
     5101 ggacaggcaa atgggtctgt aaaattggcc gttccaactc caatcgctga agctcctgca
     5161 accatcatct ctatagcctt gtccgccgta tccacaccac ccataccaat aattggtaaa
     5221 tcagtcatct gagcaacctg acgaatgagt ttgagagcaa ccggaaaaac tgctgggcct
     5281 gacattcctc ctgtaccatt tgccaagatt ggttgtcgag ttttgagatt gaatcgcata
     5341 ccaaccaagg tatttatcat cgtcaagcca gtcgctccag catcctcagc agccttggcc
     5401 aacagggtta tgtctgccac acttggtgtc aacttaacgt aaacaggtac agatgaggct
     5461 tcgactgctg cttttactgc ttgataggct aattctggca cctgtccaat caagagacca
     5521 ttgttgccat ggtccacatt gggacaggaa atgttcagct cgattgcttt tacatttgga
     5581 gcttgtgaaa tcttccctga cacataggca tattcttcat tggaaaaacc tgccacattg
     5641 gcaatgatag gcaagtctgg aaaatgctgt tccaaccatg gtaatttttc ggataagact
     5701 acatcaacac ccggattttg aagtccaatg gcattgagca tacctgctgg tgtctcagct
     5761 acacggggag tcgcattgcc ataacgagga tgacgagtag tcgccttaat cataatggat
     5821 ccaagctggt taaggtcata ataatctgca tactcctgac caaaaccgaa gcaaccagag
     5881 gctggaatga tgggattttt caagtccaag cctggtaagg aaatcgctaa tcgttttgtc
     5941 attttaacct cctacaaaat tagactacca gtcgcaaaga ctggaccttc cttgcagaca
     6001 cgcttgttct cgtgttcttg tccctctttg ggtttgacaa cacaggcata gcacgccccc
     6061 atcccgcaag ccatcctagc ctccagtgaa atgtaggcat gaggatgttc ctgaaagcgt
     6121 tggtcaacat agttcatcat agctggtgcc ccacatgagt aaatggctgc aaactcgttt
     6181 gtcagctctt caacgaccgt tgcgacattc cccttacgcc cataggaacc atcatccgtt
     6241 gtgacataaa cttgaccata cttggctaat tcctcttcca aaatgacggc ctctttggtg
     6301 gcaaagccaa tgactgacgt gactttggcg ccgcggttcg ccgcctgttt cgccacttcc
     6361 accaagggag gaacaccgat tcctccgcca atgatgagaa tgcggtcacc ttctttgaga
     6421 aagtctactt caaaaccttt cccaagcggt cccataacat ccaaaacctg tccgaccgtc
     6481 attttcgaaa agacttccgt cccttgacct tccactcggt aaataatccg acattgagac
     6541 ttattccgat caatctcgga aatagatatt ggtctccgca agagcatgga atcatctgga
     6601 acacgaatat ggataaactg ccccattttc atatcttgga ccatatcacc ctgcaaggtc
     6661 atagcaaata tacgtggagc aagttggact tggtccacca gtaacatctg ttcttttaaa
     6721 atcatctttt ctcctattct atataacaat gacacagaaa acaagaaagt cgatatagag
     6781 aaaaaacctt gctggctcgc aaggttacac gaaaagaagg cagtatttgc cctatttatc
     6841 acgttccctt cttcgcctct ctggactcag ttaaaggata tattttcagc attatacatt
     6901 ttttagaata atttgtcaaa tcatgttaca atagaggtat gagaatccaa caattatact
     6961 atattatcaa aattgcagaa acaggcagta tgaatgaggc tgccaaacaa ctcttcatta
     7021 cccaacccag cctttccaac gctgtacgag acctggaaaa agaaatgaaa attaaaatct
     7081 ttttccgtaa ttctaagggc attaccctga caaaggatgg catggagttt ctttcctatg
     7141 ctcgtcaaat tgttgaacag acagagcttt tagaagatcg ctataaaaat ccgaatgcaa
     7201 aacgccaact cttcagcgta tcttcccaac actatgcctt tgtggttaac gcctttgtct
     7261 cactcttgaa agaaactgag atggaagatt atgaactctt cctacgtgaa acacggacct
     7321 gggaaatcat tgatgacgtt aagaatttcc gctcagaaat cggagtgctt ttcctcaacc
     7381 atttcaaccg tgatgttctg ctgaaacttt tggatgacaa tcgactatcc tatacaactc
     7441 tcttcactgc caaaccacat gtatttgtca gcaaaaccaa tcctttggca caaagaaagt
     7501 caatcactct cgatgatttg gtagatttcc cctatctcag ctacgagcaa ggtattcaca
     7561 actccttcta ctttgcagaa gaaattctag cccaggaaca ccataaaaaa tcgattgtcg
     7621 tatctgaccg tgccacactc ttcaatctct taatcggtct ggatggctat acaatcgcaa
     7681 caggtatcct caattcaaat cttaatggag ataatattgt atcaattcct ctggaatttg
     7741 atgatgaaat cgaattggtc tatatccaac acgaaaaggc attgctgtcc gacatgggag
     7801 aaaaattcat caattaccta cttgaagagg taaaattcga ccaaaaataa atacaatatt
     7861 atatagacta acacaaaata atatgttata atatatttat gaaagccgtt gaaaagaagt
     7921 ttgaaatatt tcaatttctg tgtaggaaac gctttcattt ttttataatt tatgctataa
     7981 tagacatatc atatatatta aggagtggtt agatggctca aaataaaatg ttagctatga
     8041 ttcttgctgg tggacgtgga acacgtctag aagggttgac aaaaaaagtc gccaaaccag
     8101 cggtcgcatt tggcggaaag taccgcatta ttgactttcc tctcagtaac tgtgccaact
     8161 caggtattga tattgtcgga gttttgactc agtatgagcc tgttctcttg aactcatacg
     8221 ttgcacagtc tcaacgttgg gggcttgatg tacaaggatc tggtgtcttt gtattaccac
     8281 cgagtgaaaa aatcgaaggt ttcggacttt acaaaggtac agccgacgct attacacaga
     8341 acattgattt cattgatctt cacgatccag agtacgtatt gattttgtct ggtgaccaca
     8401 tctataagat gaactacgac aaactccttg atacacatat tcagaaaaaa gcagatgcta
     8461 cgattgcggt tatcgaagtt ccaatcaaag aagcttcacg ttttggtatc atgaatacgg
     8521 atgaagatta ccgtattgaa gaatttgaag aaaaaccaga aaatcctaag agcaatttag
     8581 catcaatggg tatctatatc ttcacttgga agaccttgaa aaagtacctt caagaagatg
     8641 acaaattgga cacttcatct cacgattttg ggcacgacat cattccgaaa tacttagaag
     8701 atggccgcac tctcattgcc catccattcc gtggttattg gaaagacgta ggtaccgtta
     8761 acagcctctg ggaatccaat atggacttga ttgatcacgc tggagatttg gacctttctg
     8821 accgctcatg gagaatctac tcagaagaca agggctcacc tgctcaggtg attggtgcga
     8881 ctgcaactgt taaatctgcc tatattgata aaggggcagt tattgatggt acagtagaac
     8941 attctgttat ttcaacagat gtacaggtca accaaaatgc cgtagtaaaa aattctgtcg
     9001 tcctgcctgg tgctattatc ggcgaaggtg ttgaacttga ctacgtcatc gtcgctgaaa
     9061 atattaaaat tgccgacgga gttaaactca caggagacat cgaccatatc ctcttgattg
     9121 acaagaatgt gaccaagtaa gaaaggactg ctatgctaag aaatactctc ggaattgtaa
     9181 atattgaagg aaacaacgta cattttggtg acgtgatgaa gcaccgtggc gtacaagctt
     9241 tcggtttctt aggtcgttat cgcctaattg actttgctct atccaatatg tcaaactctg
     9301 gaattacaga attccaagta tacatgcctg ccgaaatgcg ttcaacaatt cagcacgttg
     9361 gtacagggaa acactataat atcaacagca aacgcggtac ccttcgcttg ctcaatagcg
     9421 caacagaccc aaatagtgtc tatcgtcacg atattaatgc cttcacagaa aacatccact
     9481 acatcgaaaa ttctacaaaa gattatgtgc tagttgctcc atcttacttc atctatagcc
     9541 aggatttttc aaaagtcatg gatgaccata ttgcaacgga tgctgatatt accgttcttt
     9601 ataaaaacgt ttcagatgct aaagaaaatt tcatcggttg tcaaactctc aaatttggtg
     9661 aagaccgtcg tgtcgtagct tttgaggaaa accacggtaa atataaaaac cgtcccgttt
     9721 cccttgaagc ctacattatg aaacggacta catttatcga cttgattaaa cgtgctaaca
     9781 aagtgtcgtc tctctactgg ttaaaagata ttttacgtga tacagttgac cagtacaaga
     9841 ttatgggcta tgcacatcgt gattatgtcg catgtatcaa tacgacagct tcctacttca
     9901 atactcaaat tgaattgatt gaccaagata cccgcaaact cctcttcaaa catgattggc
     9961 caatccatac ccaaacaagt gatagctcac catgtttgta tggtccattg gcagaggtca
    10021 aacgtagcct aatttcaaat ggagcgaata tcaatggtca agtcgaaaat tcagtcattg
    10081 accgcgatgt tatcattgaa gaaggtgttg ttatcaaaaa ctcaatcatt ctcaatggcg
    10141 tgacaatcaa gagtggggcg aatattgaaa atgcaattat cgataaagca actaaaatta
    10201 ttcacccaat tgacatcaag ggaagcgaaa cttcgccttc atacttgaaa ccacaccaaa
    10261 tcatttagga gctaacatga caaaaaaatc tgttctcttt gtagcatctg aaggacttcc
    10321 attcatcaag actggtggtt tggccgatgt aatcggttcc ttacctaaag aattggtaaa
    10381 acaggggttg gacgtccgag tggtacttcc tctctataag aaaattgcta tcaataacca
    10441 tgctgatttc gattacgtat caagttttga tgtgcgggct ggcgacatcc aatctatggc
    10501 aaatgtttac agtcaggttg ttgatggagt aacattctat tttattgagc accgcgattt
    10561 ctttgaacgc gatgaactat atggatatga cgatgatgcc atgcgttttg gctatttcca
    10621 acatgctaca tgtcgtctgt tagaagcact tcatttcttc ccggatgtca tgcacacaca
    10681 tgactggcac actgctgccc ttccattcct ttgccgtact ttctatagct accgcgaaga
    10741 attccgcaat atcaagcatg tattcactat tcataacttg gcttttcaag gtattttcca
    10801 caaacaagca ctttggtcag cgcttggcat ggactatagc tactatttgg atggcattgc
    10861 acgttttcat gatgaatgta tcagcttcat gaagcttggt atcctatacg ctgacaaggt
    10921 tactacagtt tctgaaactt atgctcacga aatcctaacg gaagaattcg gcgaaaacat
    10981 gcaacatgta ctagagttgc gcaaatatga cttggttggt attgtcaatg gtatcgacta
    11041 tgacagttgg gatagtcaaa cagaccagta ccttgtgaga aattatagtc ttgaaacgat
    11101 tgaaagtaaa aaggcaaata aactggccct gcaagcacaa tttgcccttc cacaagatga
    11161 gaatgtccta ttgataggta tcgtctctcg tttgacatgg caaaaagggt tctacctctt
    11221 gaccgaggta cttggccatc ttcttcaagc ccatgtccaa tttgttatct taggcaatgg
    11281 tgaggaagac attgaaaatg cctttaatca ctttaaacat gcttatcctg ataaatttgc
    11341 cttctaccgt ggctacaatg aaccgcttgc ccaccaaatt tatgcagcaa gtgatctctt
    11401 cctcatgcct tctatgtttg aaccatgcgg cattagccag ttgatttcaa tgcactacgg
    11461 aacactccct ctagtgcgtg aaacaggtgg cttggttgat actgtagcac catacaatat
    11521 gtctaccaag gaaggaactg gttttagctt tggagggcgt gacgcttaca atatgcgaca
    11581 agtctatgat ttagcccttc aaacctacta tgaccgtccc gatgactggt atgccatggt
    11641 tgaacaagct atgaagcgtg attttagttg gacagcttcg gcagagaaat acatctggct
    11701 ctaccgtgaa attagtggct aggaaataag acgaaaaaat aaactgaatc ggagtgtgac
    11761 cctagtccac tccttttcgg caatggagat tgctatgaca gaatttactg acctagattt
    11821 atattatatg aatgctggtg agcataccac tctttacgaa aaaatgggtg ctcacattat
    11881 aaaagaacga aacaaaatta tcggaaccca atttcgtgtc tatgccccaa atgccagaga
    11941 agtattctta gttggcaact ttaacgagtg gcaacgcagt cactctatgg agcgtgaaat
    12001 tgatggagtg tttcaacttt atgtagacgg attgaaatcc cttgaagatt ataaatacct
    12061 gattatcaca cacgatgggc gtgaaatata taaggctgac ccttatgcat ttttcagcca
    12121 agttcgtcca gacactgcct ctacaaccta caattcgcgt tataaattca aagatgacat
    12181 ctggatgtat aatcgtgtta actatgattt taaagaacag ccagtatcca tctacgaggt
    12241 gcacttaggt tcgtggaagc aaaaatttgc taataaaaat gaaggaggag ctcctgtaga
    12301 agctttcaat agttataagg aaattactcc acttctcatc gaacatatca gggaaaataa
    12361 ctacacacat attgaattat tgccaattac cgagcatcct ctcgatgcgt cttggggcta
    12421 tcaggtaaca ggctactaca gtccaactag tcgctatggc aagccagatg aacttaagta
    12481 tttagttgac caatgtcacc aagcaggaat cggagtgatt cttgactggg taccacttca
    12541 tttctgtaaa gatgctcatg ggctctacca gtttgatggt agttggctat acgaatactc
    12601 ctacgaacaa gaccgtgaaa accaccagtg ggggactgct aattttgacc ttgaaaaagg
    12661 actgactcgt tctttccttc tttctaattt aaaatactgg ttggaatatt tccattttga
    12721 cggcatccgt gttgatgcac tatcttatct cctctattgg cgtggtgaaa cagatgaaga
    12781 taagataaat catgccgcaa ttgactttat caaacgtgtc aatgccatgg tccataccga
    12841 ctataaggga gtcctgatga ttgctgaaga ctcttcaagc ttccctaaag tcacacattc
    12901 tctagaagat ggcggtattg gatttgacat gaaatgggat ctgggctgga tgaatgatac
    12961 actaaaattt gtggaacgcc ctgctattta tcgaaaatat cactcaaatg aaatcacttt
    13021 tggtatgtat tataaccaaa acgagcaatt cttactacca ctttcgcacg acgaagttgt
    13081 ccatgggaag cactccatta tcgagaagat gaatggcgac tacgaagaca agttccatct
    13141 agctagagtc tactacagct tttacttcgc ccatcctgga aagaaattac tcttcatggg
    13201 aaatgaatgg ggtcatatcc gtgaatggca cgaatataca gaaatggact ggggactgct
    13261 acaatttcca atccaccatt ctttctatca aatgatgaaa acattatcta ctttctataa
    13321 agaacatgat gctttctgga aatatgacta ccaagcctat gaaaaaggat ttaattgggt
    13381 aaaaatagat gaagaagcaa gcctgtatgc tttttctcgc actagtgatg agcaagaaat
    13441 cttgactatt cataacttta atgatcaaga actgtttgat gtacacttgg atttgccagc
    13501 tgacagcgaa tataaacttg tcttctcatc taatgctatt ccaatggaca catttagcct
    13561 ctatcccgat gaaaatggag ccagaattac tgtaccacgt ttgaccagtt tttatctaga
    13621 gcgtgtgaaa taattatcta taaaaaatgg agtattgaac cgacccaaat tttctgtcta
    13681 acttttgggg tgtggctcac ttactccatt cttttttgca tgcaaaaggg agtgggaaag
    13741 aactcaac
//
LOCUS       DASFQS010000061        13684 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.063, whole genome shotgun sequence.
ACCESSION   DASFQS010000061 DASFQS010000000
VERSION     DASFQS010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13684
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.063"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(371..1684)
                     /gene="obgE"
                     /locus_tag="U1041_001498"
     CDS             complement(371..1684)
                     /gene="obgE"
                     /locus_tag="U1041_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000061643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEM4768603.1"
                     /translation="MSMFLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGRGG
                     DVVFVVDEGLRTLMDFRYNRRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADT
                     GKVITDLVENGQEFVIAHGGRGGRGNIRFATPKNPAPEISENGEPGEERNLELELKVL
                     ADVGLVGFPSVGKSTLLSVITAAKPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGL
                     IEGASQGVGLGTQFLRHIERTRVILHVLDMSASEGRDPYEDYVAINNELETYNLRLME
                     RPQIIVANKMDMPEAAENLEEFKKKLAANYDEFDELPQIFPISGIAHQGLENLLDATA
                     ELLEKTPEFLLYEESDFQEEEAYYGFNPDEPEFDISRADDASWVLSGDKLEKLFTMTN
                     FDRDESVMKFARQLRGMGVDEALRARGAKDGDTVRIGKFEFEFVD"
     gene            complement(1889..2017)
                     /locus_tag="U1041_001499"
     CDS             complement(1889..2017)
                     /locus_tag="U1041_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4044 domain-containing protein"
                     /protein_id="HEM4768604.1"
                     /translation="MAFGEEKHKKTTFEKVTLVIVVVMVVVTLAGLILPAINALMN"
     gene            complement(2189..2572)
                     /locus_tag="U1041_001500"
     CDS             complement(2189..2572)
                     /locus_tag="U1041_001500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768605.1"
                     /translation="MPRYATHIIGCLFILCMLLPFSYTTDSESYSVSLVSGWRYFSQN
                     LFSLSCILIFLAFFFINYQANKNIQLIIFIMTFMVTLYFYYLPIQALGEEFWSRIIEL
                     PVAYYICGLFMLVGVGLKIKRLVSG"
     gene            complement(2733..4502)
                     /gene="uvrC"
                     /locus_tag="U1041_001501"
     CDS             complement(2733..4502)
                     /gene="uvrC"
                     /locus_tag="U1041_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEM4768606.1"
                     /translation="MNDLIKHKLELLPDSPGCYLHKNKYGKIIYVGKAKNLRNRVRSY
                     FRGAHDTKTEALVSEIADFEFIVTDSNIEALLLEINLIQENKPRYNIMLKDDKSYPFI
                     KITKERHPRLMITRQIKKDGGQYFGPYPDVGAANQTLKLLERLYPFRKCKLPENKYCL
                     YYHLGQCLAHGENLPSLSDYDKMAKEVAQFLTGHDDKIVKEVQDKMKVAAGNLEFEKA
                     AEYRDVLQSISTLRTKQRVMAHDLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERNVNL
                     FPYYNDADEDFLTYIGQFYRDQQHLIPSEVLIPQDIDQEAVEALVDTKVIKPQRGEKK
                     QLINLATKNARVSLEQKFNLLEKNLEKTYGAVENIGQLLGIPTPVRIEAFDNSNIMGT
                     SPVSAMVVFENGVPNKKEYRKYKIKTVEGPDDYASMREVLQRRYSRVLRDGLIPPDLI
                     IIDGGQGQVNVAQQVIEQELGMSIPIAGLQKNDKHQTHELLFGNPLEVVELPRNSQEF
                     FLLHRIQDEVHRFAIEFHRQIRSKNSFSSKLDGIEGLGPKRKQALMKHFKSIGNIQSA
                     SLQEIAEAGVPYKVAELVKEKLK"
     gene            4703..5446
                     /locus_tag="U1041_001502"
     CDS             4703..5446
                     /locus_tag="U1041_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768607.1"
                     /translation="MIQFDHITKTYGETIALDDLNLTIESGEIFGLIGHNGAGKTTTI
                     SLLTSIIEASYGTISVDGLNLEGNRDEVKKRIAYVPDSPDIFLHLTAFEYWHFMGKVY
                     GVEKDTVDDRIAKLSSLFDMTARQHEPIDSFSHGMRQKTIIIGALIPNPDIWILDEPL
                     TGLDPQASFDLKQMMKEHAQSGHTVLFSTHVLSVAEQLCDRIAILRKGQLIFVGSLDE
                     LKSQYPDKDLETIYLELAGRQQVKAGEEV"
     gene            5443..7053
                     /locus_tag="U1041_001503"
     CDS             5443..7053
                     /locus_tag="U1041_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM4768608.1"
                     /translation="MSKSIIWELVKINILYSNPQLLASVKKKQSKRKDASFSAYKSVL
                     LQQVFMVLSFGLLYSVFFMGVDYSQSIGFFSLQLALFTIIAIVYGFTGFFSVFYDSKD
                     TKLYLALPLKPQEVFLAKILSAQGMVLPFLMPCLSLLLITYWQIGGPLLALASIPSFL
                     ILWILVNLVNLIIMHFVGEVLTKSPRKTLISTILMTGSSLMAFAALMFLQSQQTVSLE
                     SGGFVDFPIIPIFAGFHYLVSHTISLETLLHFGLPFILMIGLIVFAFKTVIPNYFNQV
                     LAIENASTKRTNNAKSAKIPSNLNQALVKHHLSTLKDSNLMVQTMIQPIIMGVALFPS
                     FSRFTENGGLSSVEWDFFGIALLAGFLLGSLFAGSTTFIGVAMSLEKENYHFIRTLPI
                     SFKKFIIQKFWVLAAVQFALPTLLYFALALGFMKVKLILAVFFTVGIIISALLTGQIY
                     YWRDQRLLMLNWQNSNQLFGRGAGQWLIAGAIIGTMFLGAIILVVSIILAGTIGAAYV
                     SSALMTLLFVLSAALQLYIYKAYWQKLK"
     gene            complement(7076..7519)
                     /locus_tag="U1041_001504"
     CDS             complement(7076..7519)
                     /locus_tag="U1041_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4768609.1"
                     /translation="MLKAMEVYLVTNGNGLEAIEFYKNALRATVEQVNLFKDFLPDCP
                     AELENYVMNAQFRLNGQRFMLSDNNPEMPYTVGDNITVALITDDAETAQELYSKLSVD
                     ATAINMELQAVPWSPAYGNITDKFGISWQINAEVEGYGQEYYAEN"
     gene            complement(7608..8363)
                     /locus_tag="U1041_001505"
     CDS             complement(7608..8363)
                     /locus_tag="U1041_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEM4768610.1"
                     /translation="MIMKRTILLCLPTILLLAACHQNTNQANTTKNSSTVVSTTSSQS
                     ASTTSEQSTSSSTSAEMNQEVTSTETQVNFNGSYYSVQGKYGEVIIANKKHPLAADYA
                     PGENPEALAAFQRLIADMQALGFGVSNNYSGFRSYETQASLYQSYVNQEGQAAADRYS
                     ARAGYSEHQTGLAFDLLDTSGNLLEEPNASQWLATNAHLYGFIVRYLPGKESSTGYMA
                     ESWHVRYIGQEATDIYNSGLTLEEYFGVPGGDY"
     gene            complement(9020..9784)
                     /locus_tag="U1041_001506"
     CDS             complement(9020..9784)
                     /locus_tag="U1041_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4768611.1"
                     /translation="MKSLLRRIRPTKPLKELTWIDLIIITTILCGNAIYTSTMQWIAS
                     FSATETVEAGVLSFSPADNWWALANQGKLFLFALVYLLIRNYDFKQLKVKLEWRVLIW
                     GPLIFIGAGLISDLAFTAFSYIPGLSGGYNFLGYLPYYDWNIMTVLNRFLAVDYSTVI
                     YSLFNGFYEEFFFLGLLLSTDKKKRSLVVLFSTIVRISFHTYQGMVSALVIGVAFGLF
                     YYYMYTRKNDNLLPYFLGHALADMVGTSFFLLFIAG"
     gene            complement(9863..10546)
                     /locus_tag="U1041_001507"
     CDS             complement(9863..10546)
                     /locus_tag="U1041_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjG family noncanonical pyrimidine
                     nucleotidase"
                     /protein_id="HEM4768612.1"
                     /translation="MQYKHLLFDLDHTLLDFNRGEEVALTQFLTAMEVEDIQAFKEVY
                     RPLNQGMWKDLEKGNITKKELINTRFSRTFAHFGRQVDGREMALRYQEFIGRQGQIFT
                     GADKLLQELTHRGYQIYAATNGVTYIQENRLLHSPIQSYFKEVFISEQMGTQKPAADF
                     YEKIAEQIAGFQFDQALMIGDSLTADIQGGNNAGMDTVWYNPTHMINNSKAVPTYTIH
                     SYQELLDLL"
     gene            complement(10862..11248)
                     /locus_tag="U1041_001508"
     CDS             complement(10862..11248)
                     /locus_tag="U1041_001508"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768613.1"
                     /translation="MNLQVQFFQNDVIKAIKGGVYQISLQKVDDERYVMYIGESFSML
                     IRCAQHLYQLRKYPEYLGMTTETLRDQNLILMFEILELEEAMGIRRKKEKEYIKKYRP
                     LLQSGLSDRMLPISRKKEAVANFLEI"
     gene            complement(11251..13530)
                     /gene="pcrA"
                     /locus_tag="U1041_001509"
     CDS             complement(11251..13530)
                     /gene="pcrA"
                     /locus_tag="U1041_001509"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HEM4768614.1"
                     /translation="MNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYL
                     IDEKMVNPWNILAITFTNKAAREMKERAYALNPATQDCLIATFHSMCVRILRRDADHI
                     GYNRNFTIVDPGEQRTLMKRILKNLNLDPKKWSERSILGTISNAKNDLIDDKAFEAQA
                     GDLYTQIVAKCYTAYQKELRQSEAVDFDDLIMLTLRLFDQNPEVLTYYQQKFQYIHVD
                     EYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPESKVVL
                     LEENYRSTKNVLQAANEVIENNRNRRPKKLWTQNAQGDLITYYRARDENDEAIFVAGQ
                     IDQLHREGKAYKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDVISY
                     LNIIANPSDNISYERIVNEPKRGVGPGTVDKLRDFATSHSMSLLEASQDIMLSPIKGK
                     AAQAVFDLANLLYNLRNQLDNLTVTQVVEAVLNQTGYIDALAAQNTLEANARIENIQE
                     FLSVTKNFDEKDTEEEETGLDRLTRFLLDLALIADTDDGNTESSEVTLMTLHAAKGLE
                     FPVVFLIGMEENVFPLSRASEEEAELEEERRLAYVGITRAEQILYLTNANSRLLFGRT
                     NYNQPSRFIREISSDLLDYQGLARPANTSFKASYVNGRATQFGQGMSLQQAMQSRKAS
                     VQPSAKLGGSMPFASGNQSSSSGTNWSVGDIAVHKKWGRGTVLEVSGSGSNQELKINF
                     PEMGLKKVLASLAPISKEE"
BASE COUNT         3873 a         3056 c         2609 g         4146 t
ORIGIN      
        1 gcttacctcg ctctcgaatt tcttagctcg ggttaaaact gtcccccgaa catggtcgct
       61 ttcgtatttc aaggcaacca gctgaaaaag ttctgcaaac tgtttcactc cactggacag
      121 gctacgacat ggagtacagg cagtcgatac cactgcctgt gcggaattag taaggttggt
      181 aggtagtccg ccataacggc taccgtatca catcaagtcc tttaggattt agatgcgatt
      241 ccaaagttac gacacggagc ccaaatggtc gatactacca tttgggtgaa gttagtaagg
      301 tagctagcca aggtccccta ggacttggcg tagtttgact agcaagttaa cttgcagtca
      361 aactgctacg ttaatccaca aactcaaatt cgaacttgcc gatacgaact gtgtcgccgt
      421 ctttggctcc gcgggcacgg agggcttcat cgacgcccat gccacgcaac tggcgagcaa
      481 atttcatgac agattcgtca cgatcaaagt tagtcatggt gaagagtttt tctagtttgt
      541 caccagatag aacccagctt gcatcgtctg cacggctgat gtcaaattct ggctcatctg
      601 ggttaaagcc atagtaagcc tcctcttctt ggaaatctga ttcctcgtag agcaagaatt
      661 caggagtttt ctctagcaac tcagctgtgg catccaaaag attttccaaa ccttggtgag
      721 caatccctga gattgggaaa atctgtggca gttcgtcaaa ctcgtcgtag ttggctgcca
      781 atttcttctt gaactcttcc agattttctg ccgcttctgg catatccatt ttgttggcaa
      841 cgataatctg aggacgctcc atgagacgaa gattgtaggt ttccaattca ttgttaatgg
      901 ctacatagtc ctcgtaagga tcacggcctt cacttgctga catatccaat acatgcaaga
      961 taacccgagt ccgctcaatg tgacgaagga attgcgttcc caatccaaca ccttgactag
     1021 ccccctcaat caaacctggt aagtctgcca cagcaaatga ctcgccagat ttggtccgaa
     1081 ccattcccaa atttggcaca atggttgtaa aatggtaggc accaatttta ggtttagctg
     1141 ctgtaataac actgagaagc gttgattttc caactgatgg gaaacctaca agacctacat
     1201 cagccaacac tttcaattct aattcaagat tgcgctcctc acctggttct ccattttcag
     1261 aaatctcagg cgctggattc ttaggtgtcg caaaacgaat atttccacga ccaccacgac
     1321 caccgtgggc aatgacaaat tcttgaccat tttcaaccaa gtcggtaatg accttgccag
     1381 tatccgcatc acgaacagtt gtcccctgtg gtactcgaac aatcaggtct tccgcaccac
     1441 gaccatgcat gcccttggtc atcccttttt cgccatcgtc agctttaaaa cgacggttgt
     1501 aacgaaagtc catgagagta cgcaagcctt catctacaac aaaaacaacg tctccgccac
     1561 ggccaccatc accgccccaa ggaccgccat taggtacata cttttcacgg cggaaggcga
     1621 ccatcccatc gcctccctta cctgccttga ccttaatctt ggcagtatct aaaaacatac
     1681 tcataattta ccctattctt tcctagaaaa aaacgcttaa aagcgtttta gacctgtatt
     1741 cacaagcgaa gtgcttatat ataagaaatc gtttttagcc aatcaagata gttttttcag
     1801 aatactgact gtattttgaa aaaaaactaa cgatgagtgc ttaaaaacta gccttagtat
     1861 agaagtgctg aacagtgaat acagattctt aattcatcaa tgcattaatg gctggtaaaa
     1921 tcaagccagc taatgtcacg acaaccatca cgacaacaat tactaaagtt actttttcaa
     1981 atgttgtttt cttgtgtttt tcttcgccga acgccattgc tttctcctta atcagtcatt
     2041 gataattcat tttaccataa attagtagag ctttcaaatc tcatctctac ctaccagaag
     2101 acaagattta ccagattatc ttaaaaggac tgctttccag cttttgacta gaaagacagt
     2161 cctcgttctt ttcagaaata ttagacaatt aaccagatac caaacgtttt atttttaatc
     2221 caactccaac aagcataaat aaaccacaaa tgtaataagc aacaggcaat tcgattatac
     2281 gactccagaa ttcttctcct agagcctgaa tgggtaagta ataaaaatac aatgtaacca
     2341 taaaagtcat gataaaaata atcagctgaa tatttttatt agcttgataa ttaatgaaaa
     2401 agaaagctaa aaagattaga atacaggaca aggaaaacaa gttttggctg aaataccgcc
     2461 aacctgacac aagggaaaca gaataacttt cactgtccgt agtatatgaa aacggcagta
     2521 gcatacacaa tatgaataag caaccaatta tatgagtggc atatcttggc ataatcatca
     2581 cctaactctc tattttacta gcattattgt attagtaata aattgaagct tatcaagcac
     2641 tttatgtgta tattataaca tatattgcta agattgtaaa gcattttagt gtatttttat
     2701 aagatttttg gatattatta caccgtttgg ttttacttca acttctcctt gaccaactcc
     2761 gccaccttat acggcacacc tgcttctgcg atttcttgta gactggccga ctggatattg
     2821 ccaatggact tgaaatgctt catcaaagcc tgcttgcgtt ttggtcccaa gccttctatg
     2881 ccgtccaatt tggatgagaa agaatttttt gaccgaatct gacgatgaaa ctcaatagca
     2941 aaacggtgaa cctcatcttg aatccgatgc aggaggaaaa attcctgtga attacgaggc
     3001 aactcaacta cttccaacgg attgccaaag agcaattcat gggtctggtg cttgtcattc
     3061 ttctgcaaac ctgcaatggg aatggacata cccaactcct gctcgatgac ctgctgggcg
     3121 acattgacct gtccctgacc accgtcaatg ataatcaaat caggcggtat caaaccgtcc
     3181 cgcagtaccc gactgtaccg ccgctgcaaa acttctcgca tggaggcata atcgtctggt
     3241 ccctccaccg tcttaatctt gtacttgcgg tattcctttt tattaggcac cccattttca
     3301 aagaccacca tggccgatac aggactggtc cccatgatgt tggagttatc gaaagcctca
     3361 atccgcacag gcgtcggaat ccccaaaagc tgaccgatat tctccaccgc accgtaggtc
     3421 ttctccagat ttttctccaa aagattaaac ttctgctcca gactaacacg cgcattcttg
     3481 gttgccagat tgatgagttg cttcttctcg ccacgctgag gcttgatgac cttggtatcc
     3541 accagagctt ctacggcttc ttggtcaata tcctgcggta tcaacacttc agagggaatc
     3601 aaatgttgct ggtccctgta aaactgaccg atgtaggtca aaaagtcttc gtccgcatca
     3661 ttatagtaag gaaagagatt gacattccgc tcaatcagtt tcccctgccg aacaaagaaa
     3721 acctgcacac acatccagcc cttgtccaca tagtagccaa agacatcgcg gttttgcaag
     3781 tcatgagcca tcactcgttg cttggtccgt agggtggaaa tggattggag gacatcacga
     3841 tattccgcag ccttttcaaa ttccaaattc ccagcagcta ccttcatctt gtcctgcact
     3901 tccttgacaa tcttatcatc atgacctgtc aagaactggg ccacttcctt ggccatctta
     3961 tcatagtcag acagactggg caggttttcc ccatgagcca aacattgccc caaatggtag
     4021 taaagacaat acttgttctc aggcaattta cacttgcgga aaggatagag gcgctccaat
     4081 agtttgaggg tctggttggc cgcacccaca tctggatagg gaccaaaata ctgaccgccg
     4141 tctttcttaa tctgccgagt aatcatcagc cgtgggtggc gttccttggt aatcttgatg
     4201 aagggataag acttgtcatc cttgagcatg atgttataac gaggcttgtt ctcctgaatc
     4261 agattgattt ccaacaagag tgcctcgata ttagaatccg tcacgataaa ttcaaaatcc
     4321 gcaatctccg acactagggc ctctgtcttg gtatcatggg caccacgaaa ataagaccgc
     4381 acccgattgc gcaggttttt ggccttgccc acatagataa tcttaccgta cttgttttta
     4441 tggaggtaac agccaggact gtccggcagc aactccaact tgtgcttgat caaatcgttc
     4501 ataggtctat tatagcagat ttttcttcaa tcattaactt gtgaaattct aaacatttct
     4561 ctaaaaaact attgcttttg tactaaggta gcagtataat aaatgtaatt aattgtatat
     4621 attattcgaa gaacatttgg aataaggctt ggaataccta gaaagcccct acttttagtt
     4681 cacgaataac aaggaggtta ctatgataca atttgaccat atcacaaaaa catacggcga
     4741 aacaatcgca cttgatgacc taaatttgac aattgaaagc ggcgagattt tcggtttaat
     4801 tggtcacaat ggggcaggaa aaacaacgac aatcagtcta ctgacttcga taatcgaagc
     4861 cagttatgga actatctctg ttgatggttt aaacctagag gggaaccgcg atgaagtcaa
     4921 gaaacggata gcctatgttc cagattcgcc agacatcttc ctacacttaa cagcatttga
     4981 atactggcac tttatgggca aggtctatgg tgtagaaaag gatacagttg atgaccgtat
     5041 cgctaaactc tctagtctat ttgatatgac agcgcgccag catgagccta ttgatagttt
     5101 ttcacacggt atgcgtcaga aaaccattat tattggtgca ttgatcccta accctgatat
     5161 ttggattttg gatgaacccc taactggact ggatcctcag gcttctttcg acctaaaaca
     5221 aatgatgaaa gaacatgctc aatctggtca caccgttcta ttttctacac acgtcctttc
     5281 agtggctgaa caactctgtg accgcattgc tattctccga aaagggcaac tcattttcgt
     5341 aggaagtctt gatgaactca aatcacagta tccagataaa gatttggaga ccatctattt
     5401 ggaattagcg ggacgccaac aagtgaaggc aggtgaggaa gtatgagtaa atccatcatt
     5461 tgggaactag taaagattaa tattctttat tccaatcctc aacttctagc ttccgtcaag
     5521 aagaaacaaa gtaagcgcaa agacgcctcc ttttcagcct ataaaagtgt cctcttgcaa
     5581 caagtattta tggttttgag tttcggactt ctctattctg tctttttcat gggagtagat
     5641 tatagtcagt ccatcggttt cttttctctg caactagcgc tctttaccat tattgccatt
     5701 gtctacggtt ttacaggttt cttctccgtt ttctacgata gtaaggatac aaagttgtat
     5761 ttagcacttc ccctgaagcc acaagaagtc ttcctcgcta aaatcctctc tgcacaaggg
     5821 atggtcctac ccttcctcat gccgtgtctg tctttacttc taatcactta ctggcaaatt
     5881 ggcggtccgc tcctcgcctt agcttccatt ccttcctttt tgattctctg gattttagtt
     5941 aatttagtca acctgattat catgcacttt gttggggaag ttctgacaaa aagccctcgt
     6001 aaaacattga tttctacaat cctgatgaca ggttcttcct tgatggcttt tgctgcgctc
     6061 atgttcctgc aatctcagca gaccgtttca ctcgaatccg gtggctttgt tgattttcct
     6121 atcataccca tatttgctgg attccattac ctggtcagcc atactatatc actagaaaca
     6181 ctccttcatt ttggacttcc tttcattttg atgattggac ttattgtgtt tgcgtttaaa
     6241 actgtcattc ccaactactt taatcaagtt ttggcgattg aaaatgcttc gacaaaacgg
     6301 accaataatg ctaagtctgc caagattcct agtaatctca atcaggcttt agtgaaacac
     6361 cacctatcta ctcttaaaga tagcaacctc atggtccaaa ccatgataca accaatcatc
     6421 atgggagtgg cgctttttcc aagttttagc cgtttcacag agaatggtgg tctaagttca
     6481 gttgaatggg atttctttgg tattgctcta ttagctggat tcttgcttgg cagtctattt
     6541 gctggttcta caaccttcat cggagtagcc atgtcattgg aaaaggaaaa ttatcatttc
     6601 attcgaacac ttcctataag tttcaaaaaa tttatcatcc aaaaattctg ggtattggct
     6661 gccgtgcaat tcgcactacc aactctactt tactttgctt tggctctagg tttcatgaaa
     6721 gtcaaactca ttctagcagt cttctttaca gtcggcatca tcatttcagc cctgctaact
     6781 ggtcagattt attactggcg tgaccaacga ctcctcatgc tcaactggca aaatagtaac
     6841 cagttatttg gtcgcggagc aggtcaatgg ttgattgctg gagcgatcat aggaacaatg
     6901 tttctcggag ccattattct agttgtcagc atcatattag ctggcactat tggtgcagct
     6961 tatgtaagct cagccttgat gaccttacta tttgttctat ctgctgctct tcaactttat
     7021 atctacaaag cttattggca aaaactaaaa tagattggac gttgtccaat ctattttagt
     7081 tttctgcgta atattcctga ccgtatcctt ctacttcagc attgatttgc caagagatac
     7141 caaacttgtc tgttatatta ccataggcag gagaccaagg aactgcttga agttccatat
     7201 tgatagcagt tgcatctacg gataacttgc tgtatagttc ctgcgctgtc tcagcatcgt
     7261 ctgtgataag cgcaactgta atattgtcac ctactgtata aggcatttct gggttgttgt
     7321 ctgacaacat aaaacgttga ccattcaaac gaaactgtgc attcatcacg taattttcta
     7381 gttcagcagg gcagtctggc aagaaatctt taaatagatt tacttgctca actgttgccc
     7441 taagagcatt tttataaaac tcgatggctt ccaaaccatt accattagta accaagtata
     7501 cttccattgc tttaagcatg atggacctcc aaaattatga tggtttatta tatcacgagt
     7561 tagttataca gacaaatttt tcgacttatt tctgactaaa tgtaaaatta gtaatctcca
     7621 cctggtacac caaaatattc ttccaaggtc aagcctgaat tgtaaatatc tgtcgcttct
     7681 tgaccaatat atcgcacatg ccaggattct gccatatagc ctgtgctaga ctcttttcct
     7741 ggaagatagc ggacaataaa gccatataga tgtgcattcg tagccaacca ctgagaagca
     7801 ttgggctctt ctaataaatt accacttgta tccaataaat caaaggctaa tcctgtctga
     7861 tgttcactat atccagctct tgcagaatac ctatctgccg ctgcttgtcc ttcctgattt
     7921 acataagact ggtagagact tgcctgagtt tcataggaac gaaatccact atagttattg
     7981 gagacaccaa atcctagcgc ctgcatatct gctattaatc gttgaaaagc tgctaaggct
     8041 tcaggatttt cgcccggtgc ataatcagct gcaagcggat gctttttatt tgcgataatc
     8101 acttcgccat attttccttg tacactataa taggaaccgt taaaatttac ctgagtctct
     8161 gtacttgtta cttcttgatt catttccgcc gatgtagagc tgcttgttga ctgctccgaa
     8221 gttgttgaag cagactgact tgaagtagtc gaaacaactg ttgacgaatt ttttgtagta
     8281 ttggcctgat ttgtattttg atgacatgct gctagtaaca gtattgtcgg caagcataac
     8341 agaatagtac gtttcattat catcaccccg ttctcttata attatgtcta ttgtagcaca
     8401 atcataaaaa ctctgtctaa taacggctta tgattttaac cattaatatt ttaatgcacg
     8461 ttgaacttct ctagatttat tttctttata agaatgcaca tttaccactg ttgcaaaaat
     8521 gataacatac atgccataaa ttgaaacacc agcctttcga ctggtggaca tatatgatgt
     8581 taaatacctg tattcacaag taaagtgatt tatatacaaa atagtttttt aggagatact
     8641 gactatattt tgaaaaatcc gtcttagcta gagatactga actgtaagta caactagata
     8701 cctcatcagt agtttctaaa caaacattat tgttgatttt tagatgacat accgtttttt
     8761 acgatgtctt ctaccttcac atccgtttta ttatttagca ctcctaaaaa tacaagaata
     8821 ctaaggatga tacaaatcgt ctgctcgatt tggttttatg ataaagcaat cgaaatttga
     8881 ctgaacagat taaatatatc agcacaataa aacgggtgat gataccgagt tgatagaaac
     8941 gatgtatcat catccgtttg tcagctgtag ggagaaagaa attttatccg attagcttga
     9001 tgtccgttct tctcattgtt taccctgcaa taaacaataa gaagaaactt gtaccaacca
     9061 tatccgcgag agcatgccct aagaaatatg gtaataaatt atcatttttc cttgtgtaca
     9121 tgtagtaata gaaaaggccg aaggctacac caataacaag agcagatacc attccttgat
     9181 aggtatggaa agatatacgg acaattgttg aaaagagtac gaccagcgaa cgctttttct
     9241 tatctgtact caacaataag cctaagaaaa agaactcttc atagaagcca ttaaacaagg
     9301 aatagataac tgtgctgtag tcaacggcta ggaaacggtt gagcactgtc atgatattcc
     9361 agtcatagta aggcaagtat cctaggaaat tatacccacc agacagacct ggaatatatg
     9421 aaaaagctgt aaatgccaaa tcactaatca gaccagcacc gatgaaaatg agaggtcccc
     9481 agatcaaaac tctccactct aattttactt ttagctgctt gaaatcataa ttccgaatca
     9541 ataaatacac cagggcaaac aggaataatt ttccttgatt ggctagagcc caccaattat
     9601 cggctggact aaacgacaga actcctgctt caacggtttc tgttgcggaa aatgatgcta
     9661 tccattgcat ggttgaggta taaatagcat taccacataa aatcgttgtg ataataatca
     9721 aatctatcca agtgagttct tttaggggct tggttggacg aatacgtctc agtaagcttt
     9781 tcactttttc ctccttatat ttttgtacat attctttctg tataattata tactaaaatc
     9841 cttataagtt tcttaaaata tcttataaca aatctaataa ttcttgatag ctatgaatgg
     9901 tataggttgg aactgcctta ctattgttta tcatatgagt cggattgtac caaacagtat
     9961 ccatgcccgc attattgcca ccttgaatat ctgctgtcaa actgtctcca atcattaagg
    10021 cttggtcaaa ctgaaaacct gcaatctgct ctgctatttt ttcataaaaa tcagccgcag
    10081 gcttttgcgt ccccatctgc tcagaaataa atacttcttt aaaatacgat tgaatcggtg
    10141 agtgaagcaa gcgattttcc tgtatatagg tcacgccgtt ggtcgccgca taaatctggt
    10201 aacctcggtg tgtcaattcc tgcaaaagct tatctgcacc tgtaaaaatt tgtccctgcc
    10261 gcccaataaa ttcttggtag cgcaaggcca tctcccttcc atcaacttgc cgaccaaagt
    10321 gggcaaaggt ccgtgaaaag cgggtgttta ttagctcttt ctttgtaatg ttcccttttt
    10381 ccaaatcctt ccacatgccc tgattgagtg gtcgataaac ttctttaaaa gcttgaatat
    10441 cttcaacctc catagctgtc aaaaactggg ttaaggctac ttcttctcca cgattaaagt
    10501 caagaagagt atggtcaaga tcaaagagta agtgtttgta ttgcaagatg ataagtcctt
    10561 tctaagcaga aactactgaa acgatgtcag gcagtatatc taaagtatac cacagtttct
    10621 taaaaaatag ctctgtgtcc tagactctat tatactgttt ttcagatttc atactcttta
    10681 aaacgttgtc aacttgcctc gatgagtgaa aagctccttt ggagcttttt agcctgttgc
    10741 cttgaaataa gaaagcaaca gagttcgatt atcgacttcg tttcctaggc tacttttgat
    10801 tttcgaagag tatgaataaa aaaaatacaa cacatttaat gcattgtatt ttaatcacta
    10861 tctatatttc cagaaaatta gccaccgctt ctttttttct agaaatgggt aacatacgat
    10921 cactaagtcc actctgtaac aagggcctat acttcttaat gtactccttt tctttttttc
    10981 ttctgattcc catcgcttct tcaagctcta gaatttcaaa cattaagata aggttttgat
    11041 cacgaagggt ttcagtggtc atccctaaat actctgggta ttttctcaac tgatataaat
    11101 gttgtgcaca tcttatcagc atagaaaatg attcaccgat atacatgaca taccgttcat
    11161 catcaacttt ctgaagtgaa atttggtata cccctccctt gatggctttt ataacatcat
    11221 tttgaaaaaa ttgtacctga agattcatcc ctactcttcc ttacttattg gcgccaagct
    11281 agctaagact ttcttaagcc ccatttctgg gaaattgatt ttgagttctt gattgctgcc
    11341 tgaacctgat acttcaagga ctgtcccacg tccccatttc ttgtggactg cgatgtcacc
    11401 aactgaccag ttggtgcctg agcttgacga ttggttgcct gatgcgaaag gcatgctacc
    11461 tccgagcttg gcagatggtt gtacggatgc ttttcgactt tgcatggctt gttgcaaact
    11521 cataccttgt ccaaactgtg tcgctctgcc attgacataa gaagccttaa agctagtatt
    11581 ggctgggcgg gcaagacctt ggtagtcgag gaggtcgctg gaaatctccc gaatgaaacg
    11641 gctaggttgg ttgtaattgg tgcgaccaaa gagcaggcgg gagttggcat tggtcaggta
    11701 gaggatctgc tcagcacggg tgattcccac gtaggccaga cggcgttcct cctccaactc
    11761 agcttcctct tctgaagcac ggctgagcgg gaagacattt tcctccatgc caatcaagaa
    11821 gacaactgga aattccagac ccttggccgc atggagagtc atgagggtca cttctgatga
    11881 ctcagtattg ccgtcatctg tatctgcaat gagagccaaa tcaagcagga agcgtgtcaa
    11941 gcgatccaga cctgtctctt cttcctcagt atccttttcg tcaaagtttt tggtaacaga
    12001 caggaattct tgaatgtttt ctatgcgagc attggcttcc agcgtatttt gtgctgcaag
    12061 ggcatcaatg tagcctgttt gattcaatac tgcctcgact acttgggtaa ccgtcaagtt
    12121 gtctaattga ttacgaagat tatagaggag attggctagg tcaaagactg cctgcgctgc
    12181 cttaccttta atcggcgata acattatatc ctgagaagct tctagcaagg acatgctgtg
    12241 gctggtcgca aaatcacgga gtttgtcaac cgtaccaggt ccaacgccac gttttggctc
    12301 attgacaatg cgttcatagg aaatattatc cgatgggtta gcaatgatat tcaaataaga
    12361 aatcacatct cggatttcct tacggctgta gaacttggtg cctccaacca tagtataagg
    12421 gatattggac ttgagcaggg cttcttcaat ggtacgggat tgggcattgg tacgatagag
    12481 aactgcaaaa tccttataag ccttgccttc tcggtgcaat tggtcaatct gccctgcgac
    12541 aaaaatcgcc tcatcattct catctctggc acgatagtaa gtaatcaaat ccccttgggc
    12601 attctgtgtc cagagttttt tgggacgtcg attgcggttg ttttcgatga cctcattggc
    12661 agcctgcaag acgttcttgg tcgaacgata gttttcctcc aaaagcacga ccttgctctc
    12721 tggatagtcc ttttcaaagt ccaggatatt ttgcatatcc gcaccacgcc aaccatagat
    12781 cgactggtcc gcatccccga ccacgcagat attcttgaaa cgtgatgcca ggagcttgac
    12841 taattggtac tgggcatggt tggtatcctg atactcatct acatggatat actggaattt
    12901 ctgctggtaa taggtcagga cctctggatt ttggtcaaaa aggcggagcg tcaacatgat
    12961 caaatcatca aagtcaacgg cctctgactg tcttagttcc ttttgataag ccgtgtagca
    13021 tttagcaaca atctgcgtgt ataggtcgcc tgcctgggct tcaaacgcct tgtcatcaat
    13081 caagtcattt ttggcattag aaatggttcc caggatagaa cgttcactcc actttttcgg
    13141 atctaaatta agatttttca atatccgttt catgagtgta cgctgctcac cagggtctac
    13201 gatggtaaaa ttgcgattgt agccgatatg atcagcatct cggcgtaaaa tacggacaca
    13261 catggagtgg aaggtcgcaa tcaaacaatc ttgcgtagca ggatttaggg cgtaggcccg
    13321 ctccttcatc tcacgcgccg ctttattcgt aaaggtaatg gctaagatat tccaaggatt
    13381 gaccattttt tcatcaatca aataagcgat acggtgggtc aggactcgcg tcttacctga
    13441 accagcacct gccataatca atagcggacc ttccgtcgtc tgcaccgctt ctgcctgtct
    13501 gtcattcatt ccgtttaata atgggttcat tttctcatac tttcttagaa catgtattac
    13561 aagtggagtg cttttaaata agagatagtt tttcgctaat caaggtagtt ttttgaagga
    13621 ataccaactg tatcgtcatt tagtttttct gttattactt cgacgtacga gaaaacttcg
    13681 tttc
//
LOCUS       DASFQS010000062        13048 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.064, whole genome shotgun sequence.
ACCESSION   DASFQS010000062 DASFQS010000000
VERSION     DASFQS010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13048
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.064"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(27..527)
                     /locus_tag="U1041_001510"
     CDS             complement(27..527)
                     /locus_tag="U1041_001510"
                     /inference="COORDINATES: protein motif:HMM:NF022641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2812 domain-containing protein"
                     /protein_id="HEM4768615.1"
                     /translation="METKTECKVFFITDFSQQADYLSEMHQQGWKLVKISWLFFYHFE
                     KCQPEEVVYQVDFKESKNKDRENYLHMYEDYGWEFVISCQNFNIFRKPAKMGDLELYG
                     DRESKVEFVKTIFQRRYLLSLGLYFILLGTNMRSHPAFVLGISIIYIPLLLLLGTRFY
                     RMVKSN"
     gene            complement(517..840)
                     /locus_tag="U1041_001511"
     CDS             complement(517..840)
                     /locus_tag="U1041_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4768616.1"
                     /translation="MNDKLKRVYVPMTETAFYILFHLQEERHGYDITQKTKQVTAGQV
                     VISPGTMYGTLSKMEKDGLIAFVREEDKRKFYRITETGREILDIELARIERLYRNSKG
                     ESYGD"
     gene            complement(951..1646)
                     /locus_tag="U1041_001512"
     CDS             complement(951..1646)
                     /locus_tag="U1041_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4768617.1"
                     /translation="MADVRLYISRHGKTMFNTIGRVQGWCDTPLTKAGEEGIRELGLG
                     LKDAGLDFKVAVSSDLGRTVQTITIAQRELGILGKIPYYQDKRIREWCFGSFEGMYDA
                     DLFQGVLPRLKGTIDVVGMSYEEIAHGIQEADTAGWSEPWEVLRDRILTGFESIAQDL
                     EKQGGGNALVVSHGMTIATLVNLLQPESPTNLFLDNGSITVLKYENGQFTIEAVGDLS
                     YRKRGAELIAQGK"
     gene            complement(1717..1932)
                     /locus_tag="U1041_001513"
     CDS             complement(1717..1932)
                     /locus_tag="U1041_001513"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768618.1"
                     /translation="MTRTRRQKSLKALKEERLKECYSGKARFTDRISAELFVIRCQRV
                     KKEIGERNLVRSYFCPACHAWHVTSHK"
     gene            complement(1969..3306)
                     /locus_tag="U1041_001514"
     CDS             complement(1969..3306)
                     /locus_tag="U1041_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEM4768619.1"
                     /translation="MDIRQVRETIEMIEEQNFDIRTITMGISLLDCIDADIEKAAEKV
                     YAKIVTKAKNLVAVGDEIAAELGIPIVNKRVSVTPIALIGAATDATDYLPLAHALDKA
                     AHEIGIDFIGGFSALAQKGYQKGDEILINSIPQALAQTSKVCSSVNIGSTKTGINMTA
                     VRDMGRIIKETAEASDMGAAKLVVFANAVEDNPFMAGAFHGVGEADVVINVGVSGPGV
                     VKRALEKVRGESFDVVAETVKKTAFKITRIGQLVGNMASERLGVKFGIVDLSLAPTPA
                     VGDSVARVLEEMGLETVGTHGTTAALALLNDAVKKGGVMACNQVGGLSGAFIPVSEDE
                     GMIAAVQNGSLNLEKLEAMTAICSVGLDMIAIPETTPAETIAAMIADEAAIGVINQKT
                     TAVRIIPLGKEGDMIEFGGLLGTAPVMKVNQASSVDFINRGGQIPAPIHSFKN"
     gene            complement(3318..3584)
                     /locus_tag="U1041_001515"
     CDS             complement(3318..3584)
                     /locus_tag="U1041_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002905356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEM4768620.1"
                     /translation="MKAIVTVVGKDKSGIVAGVATKIAELELNIDDISQTVLDEYFTM
                     MAVVSSDEKKDFTKLRAELEAYGQTLNVKINIQSAAIFDAMHNL"
     gene            3841..5583
                     /locus_tag="U1041_001516"
     CDS             3841..5583
                     /locus_tag="U1041_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4768621.1"
                     /translation="MKIIKQLWWFFSLEKKAYLIGILSLCLVSVLNLLPASIMGQLID
                     QIASGQLTEHRLLLGVAGLILSALAMYGLRYLWRMNILATSYRLGKIMRARLFDHFMH
                     LSPSFFQQHRTGDLMAHATNDINALTRLAGGGVMSFVDATVTALVTLITMSLSISWQM
                     TLVAILPLPFMTLTTNFLGRRTHENFKASQAAFSELNNKVQEAVSGIKVTKSFGYQEQ
                     ETAAFQEVNQAAFLRNIKTMRYDALFNPAVLFFIGLSYLLTLLVGSHFISQGQVSLGQ
                     LVTFMTYLDLLVWPLMAIGFLVNISQRGDVSYNRIQTLLSISSEVIETDQPLPAPSNG
                     EIVYEISEFAYDNIPVLQDIQFHIEKGQTIGLVGPTGSGKTSLLKLLMREYDVTNGQI
                     LLNQENIKNYKLADLRRLIGYVPQDQFLFATSVTENIRFGNPDLSLNQVEEAARAVHV
                     YEDIQDMPDRFETMVGEKGISLSGGQKQRLAMARAMILNPDILLLDDSLSAVDAKTEH
                     AILETIKQERLDKTTIITAHRLSAIVHADLILVLEDGKIVERGRHQELLDEKGWYYNT
                     YMMQQLEKEESDAL"
     gene            5573..7321
                     /locus_tag="U1041_001517"
     CDS             5573..7321
                     /locus_tag="U1041_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768622.1"
                     /translation="MLSKTKQASVFWRLLSYLKTYRLLTVLALSFLLLTTVVRSLIPL
                     LASYFIDHYISSISETAVAILAAYFALYLLQMVLQYFGNLWFAKVSYSIVRDIRRDAF
                     GRVEKLGMAYFDQTPSGSIVSRITNDTESISEMFSGILSSFISALFIIITTLSTMFAL
                     DWKLTCLIILFLPLIFVLVNQYRKRSAPIVAKTRSLLSSINSKLAESIEGIRIIQAFS
                     QEDRLKEEFEAINQEHLDYASHSMALDSLFLRPALSLVKILAYALLMTYFGLDWSQAG
                     ISAGLIYAFIQYVNRLFDPLLDVTQHFSTLQTSMVSAGRVFTLMDQTIEEPLQLDRGA
                     KIDKGHIVFEDVCFSYDGKRQILDKVSFEVRQGQTIAFVGATGSGKSSIINVFMRFYE
                     FQAGRILIDGQDIRSFSQEELRSAIGLVLQDPFLFHGTIASNIQMYQDISQEEIEEAA
                     RFVDAAPFIEKLPEKYDHLVTERGTAFSTGQRQLLAFARTMASQPKILILDEATANID
                     SETEQTVQTSLEKMRKGRTTIAIAHRLSTIQDADCIYVLNKGKIIESGNHEQLLALKG
                     HYHRMYQLQAGQLAAT"
     gene            complement(7416..8513)
                     /locus_tag="U1041_001518"
     CDS             complement(7416..8513)
                     /locus_tag="U1041_001518"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HEM4768623.1"
                     /translation="MFYLGEFGLDRKDQHVGLANQQYSATPAKDFTETLFVHHSLPQT
                     KVDEVDISTSVAGLDFAFPFFVNAMTGGSKKTREINRLLGIMGHFGKIALASGSVSAA
                     IKDPSVAETFSVMRRENPYGIIFANLGAHHSVENAKRAVDLLEANAIQIHVNAPQEIV
                     MPEGDRDFTMWLKNIETLVREMEVPVIVKEVGFGMSRETVAQLASVGVQTIDVSGTGG
                     TDFAKIENARRTFNDYTYLEGWGQSTVTSLVEAMSVSENIRPSLIASGGIKTPLDIIK
                     SLALGADLVGMSNHFLQYVKDGKGHRFDDGLQAIKTYQWQIAEIMTMLGAKNIAELRQ
                     KDLVLAPNVQNWCEARGLDWKAYARRSANVS"
     gene            complement(8524..9603)
                     /locus_tag="U1041_001519"
     CDS             complement(8524..9603)
                     /locus_tag="U1041_001519"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HEM4768624.1"
                     /translation="MKVQVKIPGKLFLAGEYAVVEAGHPAVIAAVDQYLTVTIETSDR
                     GLLHSSQQADLYLTWERKENEIFIQDAHPYALIETAMQVTEAYLTAKGHACHGTYSLS
                     VQSDLDDQASGAKYGLGSSGAVTVATVKALLTYYGHRPDALLTYKLAVLTQTKLGMTG
                     SFGDLAASSFGGLIAYHSLDRSWLLGKMAELSLLDVVESDWQGLSISPIQLPQGLDLL
                     VGWTGSAASTDSLVSRMESQKSQAEKEQIHSQFLADSKTCVEQLIVACQTNDSASVRQ
                     ALAQNRKLLQDFARGMGLVIETPQLSQLCDLAQAYGAVAKSSGAGGGDCGICLVDSKE
                     QKVAIETAWQEAGIFPLQLKITSRE"
     gene            complement(9605..10630)
                     /gene="mvaD"
                     /locus_tag="U1041_001520"
     CDS             complement(9605..10630)
                     /gene="mvaD"
                     /locus_tag="U1041_001520"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HEM4768625.1"
                     /translation="MTKQIGIARAHTNIALIKYWGKRDKELFLPMNSSLSLTLDAFYT
                     DTKVVFDPELTADEFYLNGILQKEKEILKISRFLDLFCEYIGERAFARVESLNFVPTA
                     AGLASSASAFAALALATATALDLDLSPATLSTLARRGSGSSTRSLFGGFVEWYMGTGS
                     EDSMAHPIDDADWDIGMVVLAVNTGPKKIASREGMDHTVATSPFYTAWVETAKQDLVD
                     IKAAIASRDFEKLGQITEHNGMKMHATTLSANPPFTYWSADSLVAQEAVRQVREATGL
                     SAYMTMDAGPNVKVLCRASQMDELVAELVKVFPREKIITSKPGPAAYVLSEKDWQASQ
                     VAFEKGL"
     gene            complement(10623..11558)
                     /gene="mvk"
                     /locus_tag="U1041_001521"
     CDS             complement(10623..11558)
                     /gene="mvk"
                     /locus_tag="U1041_001521"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HEM4768626.1"
                     /translation="MSVVGKANGKIILMGEHAVVYGQPAIAMPFSAVEIIAQVTAQGE
                     ALTVACDFYKGLVHKMPKIWESLKHAIRFSLYRIGAPTDPAIHIEISSTIPAERGMGS
                     SAAVAVAVARALFAYYEKELTDSELWDIVQSSEKIAHGNPSGIDAATTSGKSPVFFIK
                     HQPIEPLELKLHAHLVVADTGVTGNTLEAISDVADLLEKKPEAIKLVEELGNLTRQAK
                     EDLATDQAELLGSRMDQAHALLQKLGVSDPSLDKLVSLAQENGALGAKLTGGGRGGCM
                     IALARTAQDAQALAQVLAQAGARQTWIQYLGETND"
     gene            complement(12533..>13048)
                     /locus_tag="U1041_001522"
     CDS             complement(12533..>13048)
                     /locus_tag="U1041_001522"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4768627.1"
                     /translation="STSASTSASESASTSASISASTSASEFASTSASTSASTSSSASA
                     SEVWITSNAGGASLELPKIDVQSVSESISVSQSVSISSSASVSTSTSASASASVSAST
                     SASVSASASRSESMIPNQPSSETVSPKPARLPNTGETASNISGAVSATLLLGAFTLKA
                     KRRRKKDEETE"
BASE COUNT         3455 a         3271 c         2708 g         3614 t
ORIGIN      
        1 agagtgctaa aaatcagtct aaagacctag ttactcttta ccatacgata aaaacgggta
       61 cctagtaata ataaaagtgg aatataaatg atagaaatac ctaagacaaa agctggatga
      121 gaacgcatgt tcgtccccaa tagaatgaaa tacagtccca aagatagcaa atagcgtctt
      181 tggaagattg ttttcacaaa ctccacttta ctttctctat caccatataa ttcaaggtca
      241 cccatcttcg caggtttcct aaaaatattg aaattttggc aggatatgac aaactcccac
      301 ccataatctt cgtacatatg tagatagttt tctcgatctt tattttttga ttccttaaaa
      361 tcaacctgat acacaacctc ttctggctgg catttttcaa aatgataaaa gaagagccag
      421 ctaatcttaa ctaatttcca cccttgctga tgcatctcac tgagatagtc tgcttgttga
      481 ctaaagtctg tgataaaaaa taccttgcac tctgtcttag tctccataac tttccccctt
      541 actatttcga tagagccgtt caatccgagc caattctatg tctagaattt ctcgacctgt
      601 ttctgttatc ctataaaact tccgcttatc ttcttccctg acaaaggcaa tcaagccgtc
      661 tttctccatt ttcgacaggg tgccgtacat ggtcccaggg ctaatcacga cctgacctgc
      721 cgtgacttgc ttggtctttt gcgtaatatc atagccatgc cgttcttcct gtaaatgaaa
      781 taaaatatag aaggctgttt ctgtcatcgg aacatagacc cgttttaatt tgtcgttcat
      841 aaaattcctt tcgcactacg atacatcgaa cttcgatgca tttattgtat cgcatctcga
      901 tacacttgtc aagaaaaaaa tcagagaata tccctgattt catttcacat ttatttccct
      961 tgggcaatca actctgcccc acgtttgcgg taggataaat ccccaaccgc ttcaatggtg
     1021 aattgaccat tttcatactt gagcacggtg atagagccgt tgtctaagaa aagattggtc
     1081 ggactttctg gttggagcaa gttaaccagt gtcgcaatgg tcataccgtg actgaccacg
     1141 agagcattac ctccgccctg cttttccaag tcctgagcga tagattcaaa gcctgtcaaa
     1201 atgcggtcac gcaagacttc ccaaggctct gaccaaccag ctgtatcagc ctcttggata
     1261 ccatgtgcaa tctcttcgta gctcatccca accacatcaa tcgtaccttt caagcgtggc
     1321 aggacacctt ggaagaggtc tgcatcatac atgccctcaa aactaccgaa acaccattcg
     1381 cggatgcgct tgtcctgata gtatgggatt tttcctaaaa tacccaattc acgctgggcg
     1441 atagtaatgg tctgaacagt ccgtcctagg tcactggata cagcaacctt gaaatcaagc
     1501 cctgcgtcct taagtcccaa accaagctcg cggattcctt cctcaccagc cttggtcagc
     1561 ggcgtatcac accagccctg cacgcgccca atggtattaa acatggtttt cccgtgacga
     1621 gaaatatata atcttacgtc tgccatagca ttctccttgt cttttcttac tatatagtat
     1681 aacaaaaaac cgactgcttg tcgcaatcgg tctaccttat ttatgacttg taacatgcca
     1741 ggcatgacaa gctggacaaa aataagatcg cacaaggttt ctttctccaa tttccttttt
     1801 tactcgttga cacctgataa caaatagttc tgcactaatt ctatcagtaa accgagcctt
     1861 gccggaataa cattccttga gccgttcttc ttttagagcc tttaaagatt tctgacgacg
     1921 agttcttgtc atttcgccct cctatctcaa atcgacctaa accaccattt agttcttaaa
     1981 gctatgaatc ggtgctggaa tctgtccacc acggttgata aagtccacag acgaagcctg
     2041 attgaccttc atgacaggag ctgttccaag tagtccaccg aattcgatca tgtccccttc
     2101 ttttccaagc ggaataatgc gaaccgcagt cgttttctgg ttgatgaccc caatagccgc
     2161 ttcatccgca atcatagccg caatagtttc agctggtgtt gtttctggaa tagcaatcat
     2221 gtccaaacca acagaacaga tagccgtcat ggcttccaat ttttcaaggt taagagagcc
     2281 attttgcacc gccgcaatca tgccctcgtc ctccgacaca gggatgaagg cacctgacaa
     2341 accgccaact tggttgcagg ccataacccc accctttttg actgcatcat tgagcagagc
     2401 aagggcagca gtcgttccgt gcgtacctac ggtttctaag cccatttcct ccaaaacccg
     2461 tgccactgag tcgccaacgg ctggcgttgg agcaagggac aggtccacga taccaaactt
     2521 gacccccagg cgttcactgg ccatattacc gaccaactga ccgatacggg taatcttgaa
     2581 ggccgtcttc ttgacggtct ccgccaccac atcaaagctc tcaccacgca ctttttcaag
     2641 ggcacgcttg accacaccag gcccagacac gccgacattg ataaccacat ccgcctcacc
     2701 gacaccatgg aaggcacccg ccataaaggg attgtcctcg accgcattag caaagactac
     2761 aagtttagcc gcacccatat cagaagcttc cgctgtctcc ttgataatcc gccccatgtc
     2821 ccgcacagca gtcatattga tacccgtctt ggtcgagccg atattgactg acgagcagac
     2881 cttagaggtt tgggccaatg cctgcggtat agagttgatg aggatttcat ctcctttttg
     2941 gtagcccttt tgagcaagag ctgaaaaacc tccgataaaa tcgatgccga tctcatgagc
     3001 cgccttgtcc aaggcatggg ccaggggaag ataatccgtg gcatccgtcg ccgcaccaat
     3061 caaagcaata ggcgtcaccg atacccgttt gttgacaata ggaataccca actccgccgc
     3121 aatctcatcg ccgactgcta ccaagttctt ggccttggtg acaatcttgg catacacttt
     3181 ctccgcagct ttctcgatat ccgcatcaat acagtccaag agggaaatcc ccatggtgat
     3241 ggtccgaata tcgaaattct gctcctcaat catttcaatg gtttctctaa cctgtctaat
     3301 atccatgaaa tctctcctta caagttgtgc atagcatcaa aaatggcagc actttgaatg
     3361 ttgattttta cattcaaagt ctgaccatag gcttctagtt ctgcacgaag cttggtgaaa
     3421 tctttcttct catctgacga caccaccgcc atcatagtaa aatattcatc caaaacagtt
     3481 tgtgaaatat catcgatatt gagttccaac tccgcaatct tggtcgcaac acccgcaaca
     3541 attcctgact tgtccttacc gacaactgta acaatagctt tcatctgaac acctcttcta
     3601 aattttcatt tattttatca taaatataca gaaaaaggta caaatctttt gatttctacc
     3661 tgtatcgtac gtgtttacaa ctccaactgt ttcttctatt cggccacggc tagaattacc
     3721 tagtttttaa gttccaaact ttctatttct accagtctgt gatacactag tgtcaccgaa
     3781 ttctattatt tgttggtggc gacaagctac caacctttct tttgttcaga aaggatactt
     3841 atgaagatta tcaaacaatt atggtggttc ttttctcttg agaaaaaggc ctatctgatt
     3901 ggaattttat cactctgttt ggtcagcgtc ctcaatctcc ttcccgcttc tatcatgggg
     3961 cagttgattg accagattgc cagcggacag ttgactgagc accgcttgct actcggggta
     4021 gctgggctca tcttgtcagc cttggccatg tacggcctcc gctatctttg gcgaatgaac
     4081 atcctggcaa catcttatcg tctaggaaaa atcatgaggg ctcggctgtt tgaccacttt
     4141 atgcacctat ctccatcttt ttttcagcaa catcgaactg gggatttaat ggcccatgca
     4201 accaatgata tcaatgccct gacccgacta gcaggtggtg gcgtcatgtc ctttgtcgat
     4261 gccactgtca ctgctttggt cacactgatc accatgagtt tgagcatttc ctggcagatg
     4321 accttagttg caatcctccc cctgcccttc atgacactca ctactaattt tctaggccgt
     4381 cgtacccatg aaaatttcaa ggcttcgcag gcagcctttt cagaactcaa caacaaggtc
     4441 caggaagctg tttctggtat aaaggtcacc aaatcctttg gctaccaaga acaagaaacg
     4501 gcggcttttc aggaagtcaa ccaagcagcc ttcttgcgga atatcaaaac catgcgttac
     4561 gatgccctgt tcaaccctgc cgtcctcttt tttattggcc tgtcctacct gctgaccctt
     4621 ctggtcggct ctcacttcat ctcgcaaggt caggtcagtc tgggccaact agtaaccttc
     4681 atgacctact tggatctcct agtctggcct cttatggcga ttggtttttt ggtcaatatt
     4741 agccagcgtg gcgatgtatc ttacaatcgg attcagaccc ttctcagcat ttcctcagag
     4801 gttattgaaa cagaccaacc gctgcctgca ccaagcaatg gagagattgt ctatgagatt
     4861 agcgaatttg cttatgataa cataccagtc ctccaagaca tccagtttca catcgaaaaa
     4921 ggccagacaa tcggtctggt ggggccaaca ggctctggga agaccagcct gctcaagctc
     4981 ctcatgcgag aatacgatgt gacaaatgga cagattttgc tcaatcaaga aaatatcaag
     5041 aactacaagc tagctgacct gcgacgatta atcggctatg taccccaaga ccaattcctc
     5101 tttgcgacca gcgtgactga aaacatccgc ttcggcaatc ccgatttatc tctaaatcag
     5161 gtagaagagg ccgctcgggc tgtccatgtc tatgaggata ttcaggatat gcctgaccgc
     5221 tttgaaacca tggtcggcga gaaggggatt tccctttctg gcggacaaaa gcaacggttg
     5281 gctatggccc gtgctatgat tctcaatcca gatatcctgc tcttggatga ctcgctctca
     5341 gcggtggatg ctaaaactga acacgctatt cttgaaacca ttaagcaaga acgccttgat
     5401 aagaccacca ttatcaccgc ccatcgtctg tcagccattg tccatgcgga tttgattttg
     5461 gtccttgaag atgggaaaat cgtagagcga ggtcgtcacc aagaattact agatgaaaaa
     5521 ggctggtact acaataccta tatgatgcag caactcgaaa aggaggaaag tgatgctctc
     5581 taaaaccaag caagccagtg ttttttggcg actcttgtcc tatctcaaaa cctatcgact
     5641 gctgacagtc cttgccctca gctttttgct gttgactacc gtggtccgca gtctaattcc
     5701 ccttctagcc tcttatttta tcgaccacta catttcttct atttctgaga ctgctgtggc
     5761 tatcctagcg gcctacttcg ccctctatct gcttcaaatg gtgcttcaat attttggaaa
     5821 cctctggttt gctaaagttt cctatagcat tgtgagagat attcgcaggg atgcttttgg
     5881 gagagtggaa aagttgggaa tggcttactt tgatcagact ccgagcggct ctatcgtctc
     5941 tcgcatcacc aacgatacag agagcatttc agagatgttt tcagggattt tatccagttt
     6001 tatctccgct ctctttatta tcatcaccac tctttcgacc atgtttgctc tggattggaa
     6061 attgacctgc ctgatcatcc tctttcttcc cttgattttc gtcttagtga atcaatacag
     6121 aaaacggtct gctcccattg tggctaagac caggagcctg ctgagttcta tcaacagcaa
     6181 actggctgaa agtattgaag gaattcggat tatccaggct ttttctcagg aggaccgctt
     6241 aaaagaagag tttgaggcta tcaaccagga acatctggac tatgccagtc attctatggc
     6301 cttggacagt ctctttctcc gtcctgctct gtcacttgtc aagattttgg cctatgccct
     6361 actcatgact tattttggtt tggactggtc acaggctggc atttctgctg gtcttatcta
     6421 tgctttcatc cagtatgtca atcgtctttt cgatcccttg ctggatgtca cgcagcattt
     6481 ttccaccctc caaacctcta tggtatctgc cggacgggtc tttacgctca tggaccagac
     6541 tatcgaggag ccactgcagc ttgaccgagg ggccaagatt gacaaggggc acattgtctt
     6601 tgaggatgtt tgtttttcct atgacggcaa gcggcaaatt ctggacaagg tttcctttga
     6661 agtaagacag gggcaaacca ttgcttttgt aggtgctaca gggtcaggca agtcttctat
     6721 catcaatgtc tttatgcgtt tctatgagtt ccaagctgga cggattttga ttgacggtca
     6781 ggatatccgc agtttttcgc aagaggaatt gcggtccgcg atcggcctag tcctgcaaga
     6841 tccctttcta tttcatggga ccattgcatc caatatccag atgtatcagg atatttccca
     6901 ggaggagatt gaggaagcgg ctcgatttgt ggatgcggct cccttcatag aaaaacttcc
     6961 tgaaaaatac gaccacctgg tcactgagcg gggtaccgcc ttttcgacag gtcaacggca
     7021 actgctggcc tttgcacgca ccatggctag ccagcctaag attctcatct tagatgaggc
     7081 aactgccaat atcgattcgg aaacggagca aacggtgcaa acctctcttg aaaaaatgcg
     7141 aaaggggcgg acaaccatcg ccatcgccca ccgtttatca accattcaag atgccgactg
     7201 tatctatgtc ttgaacaagg ggaaaatcat cgagtccggc aaccacgagc aactcctagc
     7261 tctcaagggt cactaccacc gcatgtacca gttgcaagca gggcagttag cagcgaccta
     7321 ggcaccactc cattacaaaa gccaagttcc aaaatggacc tggctttttt atttttctac
     7381 attgttgaga actgaagaca tcagtctatc tctctttaac tcacattcgc tgaccgacgg
     7441 gcataggctt tccagtcaag cccacgcgct tcgcaccagt tttgtacatt tggagccaag
     7501 accaaatctt tctgacggag ttccgcaata ttcttagcac ccaacatggt catgatttca
     7561 gcaatctgcc attgataggt cttaatagcc tgcaagccgt cgtcaaaacg atgccctttt
     7621 ccatccttga catactggag gaaatggttg gacataccga caaggtctgc acctaaagcc
     7681 aatgatttga taatatctag cggtgtttta atgcctccag aagcaatcaa acttggacgg
     7741 atattttcag aaacagacat agcctccacc aaggaagtca cggtagactg cccccaaccc
     7801 tccaaataag tatagtcatt gaaggttcga cgggcatttt caatcttggc aaaatccgtc
     7861 cccccagtac cagatacatc aattgtttgc acaccgacag aagccagctg ggcaaccgtt
     7921 tctcggctca tgccaaaacc aacttccttg acgatgacag gtacttccat ctcccgcacc
     7981 agggtttcaa tattcttcaa ccacatcgta aaatcacggt ctccctcagg catgacaatc
     8041 tcctgaggag cattgacatg gatctgaatg gcatttgcct ccaacaaatc caccgctcgc
     8101 ttggcattct caacactgtg atgggcacct aggttggcaa agataatccc gtaaggattt
     8161 tcacgacgca tcacggagaa ggtttccgca acagacggat ccttaatcgc cgcactaacc
     8221 gaaccagaag ccagagcaat cttcccaaaa tgccccataa ttcccaatag gcgattgatt
     8281 tcccgcgtct tcttgcttcc gccagtcatg gcattgacaa agaaaggaaa ggcaaaatcc
     8341 aaaccagcca cactggtcga aatatccacc tcatccacct tggtctgagg cagggaatga
     8401 tggacaaaca aggtctccgt aaagtccttg gccggcgtgg cactatattg ctggttggcc
     8461 aagccaacgt gttgatcctt gcggtctaaa ccaaattctc ctagataaaa catagggttc
     8521 tccttattct ctacttgtga tctttagttg gagtggaaaa atgccggctt cttgccaagc
     8581 cgtctctatc gctacttttt gttccttact gtctaccaag caaatgccgc agtcaccacc
     8641 acctgcacca gatgacttgg ccaccgctcc ataagcctgg gccaggtcac agagttgact
     8701 cagttgaggg gtttcaatga ccaagcccat tcctctcgca aagtcttgta agagcttgcg
     8761 gttctgagca agggcctgcc ttactgacgc tgagtcattt gtctgacaag ctactatcaa
     8821 ctgctctaca caggtcttag agtcggctag aaactggcta tgaatttgct ctttttctgc
     8881 ctgacttttt tggctttcca tccgggaaac tagactatcc gtcgaagccg ccgaccctgt
     8941 ccatcccacc aagaggtcta aaccttgggg taactggata gggctgatgg acaaaccttg
     9001 ccaatcactt tccaccacat ccagcaggga cagctctgcc attttcccta aaagccaaga
     9061 acggtccagg gaatgatagg cgatcaagcc accgaaactg gaggctgcca aatcgccaaa
     9121 ggaacctgtc atgcctagct tggtctgggt caagactgcc agcttgtagg tcaggagggc
     9181 atctggtcgg tgaccgtagt aggtcaacaa ggccttgacc gtcgcaaccg ttacagcacc
     9241 agaggaaccc aggccatact tggcaccaga agcttggtca tctaggtcag actgaacaga
     9301 taggctatag gttccatgac aagcatgccc cttggccgtc agataggctt ctgtcacctg
     9361 catggctgtc tcaatcaggg catagggatg ggcatcttgg atgaaaatct cattttcctt
     9421 acgctcccag gtcagataga gatctgcttg ctggctggaa tgaagaaggc ctcggtcact
     9481 tgtttcaatg gtgacggtca ggtactggtc aaccgccgca atcaccgcag ggtgaccggc
     9541 ctcaacaact gcgtattccc ctgctagaaa gagttttcca ggtatcttta cttgtacttt
     9601 catgctacaa gcccttttca aatgctactt gcgaagcctg ccaatccttc tcactgagaa
     9661 cataagcggc aggaccaggc ttactggtga tgattttctc tcttgggaag actttgacca
     9721 attcagctac tagctcatcc atctgacttg ctcgacagag gaccttgaca tttggtcccg
     9781 catccatggt catgtaggct gataagccag ttgcttcacg aacctgacgg actgcctctt
     9841 gagccactag gctatcggct gaccaatagg taaaaggggg attggcagag agcgttgttg
     9901 catgcatttt catgccattg tgctctgtaa tctgaccaag tttttcaaaa tcacggctgg
     9961 caatggctgc cttgatgtcc accaaatctt gcttagcggt ttctacccag gctgtgtaaa
    10021 atggtgaggt ggcaactgtg tggtccattc cctctcgact agcaatcttt ttcggtccgg
    10081 tattgaccgc caagacgacc atgccgatat cccaatccgc atcatcaatg gggtgagcca
    10141 tcgaatcttc cgaacccgtt cccatatacc actcaacaaa tccaccgaat aggctacggg
    10201 tgctagagcc agaacccctg cgagcaaggg ttgatagggt ggctggtgac aaatctaaat
    10261 ccaaggcagt tgcggttgca agtgcaaggg ctgcgaaggc cgatgctgag cttgccaaac
    10321 cagctgcagt cggaacaaaa tttagacttt ccactcgggc aaatgccctt tcacctatat
    10381 attcgcaaaa caaatccaaa aatcgagaaa tttttaaaat ttctttttct ttttgtaaaa
    10441 ttccgttgag atagaactca tcagcagtta attctgggtc aaaaacgacc ttggtatccg
    10501 tataaaatgc gtcaagggtc agggataaac tggaattcat aggtaggaat aattccttat
    10561 cgcgttttcc ccagtattta atcaaggcaa tattagtatg ggcacgggct atgcctattt
    10621 gtttagtcat tggtttctcc taagtactgt atccaggttt ggcgggcacc tgcttgggca
    10681 agaacttggg caagagcttg ggcatcttgg gctgttcttg ccagggcaat catgcaaccg
    10741 cctcgtccgc caccagttaa tttggctccg agggctccat tttcttgggc aaggctgacg
    10801 agtttatcta ggctaggatc agacacgcct aatttttgca ggagggcatg agcttggtcc
    10861 attctgctac ctagaagctc tgcctggtct gtggctaaat cttccttggc ctgtcgggtc
    10921 aagttgccca gttcttctac tagcttgata gcctctggct ttttctccaa caaatcagcc
    10981 acgtctgaaa tggcttctaa ggtgtttccc gtcacacctg tatcagccac taccaaatgg
    11041 gcatggagtt tcagctccaa gggttcgatg ggctggtgct tgataaaaaa gacgggagac
    11101 ttgccgctgg tggtcgccgc atctatgcct gatggattgc cgtgggcaat tttttccgaa
    11161 gactggacga tgtcccagag ttcgctgtcg gtcagttctt tttcatagta ggcaaagagg
    11221 gcgcgtgcta ctgcaactgc cacggctgca ctggagccca taccgcgctc ggcaggaatg
    11281 gtggaactaa tctcgatatg aatagctggg tctgtcggtg ctccaatacg atagagcgaa
    11341 aaacgaatgg catgcttgag gctttcccag atttttggca tcttgtgcac caagccttta
    11401 tagaagtcac aagcaacagt cagcgcttcc ccttgagcgg ttacctgagc aataatttca
    11461 acagcagaaa aaggcatagc aattgctggt tgcccataga ccaccgcatg ctcgcccatc
    11521 aaaatgattt ttccatttgc ttttcctact accgacatac ttttctcctt atacaatcac
    11581 tactattata ccatttttac ataagaatag aacacacgaa aacagccgac cacagtcgac
    11641 tgttctctgg agattatatg aaaaagaaat tcgctatttc tagcttgaat atagtatata
    11701 gctacaaact taaacgaaac tgaaaatcaa aaagtttttc tgaaaatatt ttcttgatta
    11761 tgaaattact aattgtaccc aaacacgaaa acagccgacc gcggtcgact gttctctagg
    11821 agattatata aaaaagaaaa gttgtttgct atttctagct tgaatatagt atatagctac
    11881 aagcttaaac gaaactgaaa atcaaaagtt tttctgaaaa tattttcttg actatgaaat
    11941 tactcttgta cccaaacacg aaaacagccg accacggtcg actgttctct ggagattata
    12001 tgaaaaagaa gggctattcc tagcttgatg atagtataca tccgcaaact taaaggaaac
    12061 tgaaaatcaa taagtttttc tgaaaatatt ttcttagatc tgaaattact cttctaacca
    12121 aacacgaaaa cagccgacca cggtcgactg ttctctggag attatatgaa aaagaaagtt
    12181 gtttgctatt tctagcttga tgatagtata catccgcaaa cttaaaggaa actgaaaata
    12241 ctaagttttt ctgaaaatag ttctgaaagt aaaaacaaat ttaacatata aggcgaatcg
    12301 agtagaaaag aagttttcct ttgaaagtca tctttttgga aatacgactc cttagaagaa
    12361 aatagctgaa tagaccactt cacctcttat gctactgtat attttatact gatctggttt
    12421 tatttgattg taattcataa aaactctgta atctttgtaa tgactctatt cactactaaa
    12481 ttacagagtt ttattaaata atctttagat tactgacatc atcgtattcg aactattcag
    12541 tttcttcgtc ttttttacga cgtcgtttag ctttaagagt aaaggctcct agcaacagag
    12601 ttgcactgac tgctccagat atatttgaag ctgtttctcc tgtattcggc aatcttgcag
    12661 gttttggact tacagtttct gaacttggct ggttcggaat cattgattca gaccttgaag
    12721 cacttgctga aacagatgcg ctagttgatg cactcacgga tgcggacgca ctggctgaag
    12781 tcgatgtgct cactgatgca gatgaactga tcgaaactga ttgagaaaca cttatagatt
    12841 ccgatacaga ttgtacatca attttcggta attccaagga agctccacca gcatttgatg
    12901 taatccaaac ttctgatgcg gacgcagatg atgaggtact tgctgaggta gacgcgctag
    12961 ttgacgcaaa ctcagaagcc gaagtacttg ctgagatgga cgcgctggtc gacgcagact
    13021 cagaagctga ggtacttgct gaggtaga
//
LOCUS       DASFQS010000063        12870 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.065, whole genome shotgun sequence.
ACCESSION   DASFQS010000063 DASFQS010000000
VERSION     DASFQS010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12870
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.065"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            247..1014
                     /locus_tag="U1041_001523"
     CDS             247..1014
                     /locus_tag="U1041_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM4768628.1"
                     /translation="MNKRERLEEITRLVNKKGTVRISEIVELLNVTDMTVRRDFIELE
                     EQGVLTKIHGGARSNKAFQYREYSHSEKHIQNKEAKQEIAERAAQLIEDGDTVFLGPG
                     TTVAFLAEAIKNPRLTVITNCMPVFTILSQKKTEDFQVFLLGGEYRQVTESFVGEITN
                     TSLEKMRFSKIFFSGNGLKGTDVMTSTLAEAYTQNIAIKHSLEKYLLLDASKIGKDDF
                     TSFCDLHDVTALVTDMNAKDENYQLLSKHIEIITTKS"
     gene            1220..1642
                     /gene="lacA"
                     /locus_tag="U1041_001524"
     CDS             1220..1642
                     /gene="lacA"
                     /locus_tag="U1041_001524"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002982747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacA"
                     /protein_id="HEM4768629.1"
                     /translation="MTIIIGADPAGSKLKDVIKDYLLEKSYDFKDVSDGSDFVDTTLA
                     VVAEVNQEEGNLGIVIDAYGVGPFMTATKVKGMIAAEVSDERSAYMTRGHNNSRIITI
                     GSEIVGEGIAKNIVKGFVEGEYDGGRHQIRVDMLNKMC"
     gene            1669..2184
                     /gene="lacB"
                     /locus_tag="U1041_001525"
     CDS             1669..2184
                     /gene="lacB"
                     /locus_tag="U1041_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacB"
                     /protein_id="HEM4768630.1"
                     /translation="MKIAIGCDHIVTYEKIAVVDYLKNQGYEVLDFGTYDNVRTHYPI
                     FGKKVGEAVVSGQADLGICICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNAN
                     IIGFGGKITGELLMCDIIEAFIKAEYKPTEENKRLIEKIAAVETLNQEQANPEFFTEF
                     LEKWDRGEYHD"
     gene            2194..3126
                     /locus_tag="U1041_001526"
     CDS             2194..3126
                     /locus_tag="U1041_001526"
                     /EC_number="2.7.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016250260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-6-phosphate kinase"
                     /protein_id="HEM4768631.1"
                     /translation="MILTITLNPSVDIAYQLDTFHLDTVNRVENVQKTAGGKGLNVTR
                     VLKQIGEDVVATGFIGGEIGSYIKKQLTRNDVKNSFVEIGNETRNCIAVLHDGKQTEI
                     LEQGPTIQEHEALNFIEHLEITLNNVDVVVISGSLPKGLASNYYVEIVELCKKFGVAV
                     VLDCSGEALKNVLESQQKPTVIKPNTEELSQLIGKEVTDDIQELKSVLSGQLFQGIEW
                     IVVSLGAQGAFAKHNDKFYRVRIPKIKVVNPVGSGDSTVAGIAAGLVHALPDEELLKN
                     ANVLGMLNAQEEQTGYVNLENAESLYSQIEVEEV"
     gene            3128..4105
                     /gene="lacD"
                     /locus_tag="U1041_001527"
     CDS             3128..4105
                     /gene="lacD"
                     /locus_tag="U1041_001527"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HEM4768632.1"
                     /translation="MVVTADKRKYMEKVSNEAGIISALAFDQRGALKKMMAKHQTEEP
                     TVEQMEELKKLVSEELTQFSSSILLDPEFGLPASRARDEQCGLLLAYEKTGYDTSSTS
                     RLPDCLVEWSVKRLKEAGADAIKFLLYYDVDGDPYVNLQKHAYIERLGSECQAEGLPF
                     FLEILSYDETIEDNASVEFAKVKPRKVNEAMKVFSDERFGVDVLKVEVPVNMNFVEGF
                     GTGEVVYTKEEAAEYFRQQEASTHLPYIYLSAGVSAKLFQDTLVFAHEAGAKFNGVLC
                     GRATWAGVVPVYIEQGEGAAREWLRTVGRENIEGLDAVLSQTATSWLEK"
     gene            4293..5126
                     /locus_tag="U1041_001528"
     CDS             4293..5126
                     /locus_tag="U1041_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017770255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM4768633.1"
                     /translation="MFRIIQSLNNNAALVKNEHGEQAVVMGLGITFQKKKGDLIVKDK
                     IENIFSLKNDEAKENFLTLLKDIPLDFISATYTVINHLVETYHYPVQEYLYVTLTDHI
                     YCAYQAVLKNTYQESRLPNISAEYPLEYKMAREALTMFREKLLNDFPNDEIGKIALHL
                     INAKGETIHPTSEEHDISKKIIAEVEQILIEHGIKRSKENSNFYDRFMIHLSYFLNYL
                     DRSHQSNESIASLEQYIKLQNPRAHQVGSQIFEMITSLVDEPVNDSERFYIVLHIQRL
                     L"
     gene            5158..5475
                     /locus_tag="U1041_001529"
     CDS             5158..5475
                     /locus_tag="U1041_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM4768634.1"
                     /translation="MNREEITLLGFEIVAFAGDARSRLMEALAAAQKGDYAKAEELVE
                     AANACIVEAHHAQTSLLQKEAAGEDLAFSVTLMHGQDHLMTTLLLKDMMSHMIELYKR
                     GDK"
     gene            5475..7154
                     /locus_tag="U1041_001530"
     CDS             5475..7154
                     /locus_tag="U1041_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003048452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose transporter subunit IIBC"
                     /protein_id="HEM4768635.1"
                     /translation="MNKLIEFIEKGKPFFEKISRNPYLRAIRDGFIAAMPVILFSTLF
                     LMVAFVPNIFGFTWSDEAVAAIMKPYGYTMGIVAVLVAGTTAKSLTDAFNRQLPKTNQ
                     INFISTMIASISGFLLLASDGIEGGFANGYMGTKGLLTAFLAAFITVNIYKVCVKNNV
                     TIRMPDEVPPNVSQAFKDVIPYALSIFVLYGIDLVTRQFLGTNVAEAILKLFEPLFTA
                     ADGYVGITIIFGAYALFWFVGIHGPSIVEPAIAAITYANIETNFQLLQAGQHADKILT
                     SGTQMFIVTMGGTGATLVVPFMFMWLTKSKRNKAIGRASVVPTFFGVNEPILFGAPLV
                     LNPIFFVPFILAPIANVWIFKFFVDTLKMNSFSVNLAWTTPGPLGIVMGTNFAPLAFA
                     LAILLVVVDVLIYYPFLKVYDEQILAEEQSGKVENSLKEKVAANFNTAKADAILEKAA
                     VDTEISEQTNVLVLCAGGGTSGLLANALTKAAKEYGVPVTATAGSYGAHREILPEYQL
                     VILAPQVASNYDDIKQETDALGIKLAKTEGAQYIKLTRDGQGALDFVKQQF"
     gene            7389..8795
                     /gene="lacG"
                     /locus_tag="U1041_001531"
     CDS             7389..8795
                     /gene="lacG"
                     /locus_tag="U1041_001531"
                     /EC_number="3.2.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003060941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-galactosidase"
                     /protein_id="HEM4768636.1"
                     /translation="MVKTLPKDFIFGGATAAYQAEGATQTDGKGRVAWDKYLEDNYWY
                     TAEPASDFYNRYPVDLELSEQFGVNGIRISIAWSRIFPTGFGEVNPKGIEYYHKLFAE
                     CHKRHVEPFVTLHHFDTPETLHSNGDFLNRENIEHFVNYAAFCFKEFPEVNYWTTFNE
                     IGPIGDGQYLVGKFPPGIQYDLAKVFQSHHNMMVSHAKAVKLYKDAGYSGEIGVVHAL
                     PTKYPYDPSNPDDVRAAELEDIIHNKFILDATYLGYYSEKTLEGVRHILKVNGGELDL
                     RDEDFAALDAAKDLNDFLGINYYMSDWMRAHDGETEIIHNGKGEKGSSKYQIKGVGRR
                     ESPVDIPKTDWDWIIYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDGTVYDD
                     GRIDYVKKHLEVISDAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERF
                     PKKSAYWYKKVSETQVIE"
     gene            8860..9753
                     /locus_tag="U1041_001532"
     CDS             8860..9753
                     /locus_tag="U1041_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HEM4768637.1"
                     /translation="MLELKNENLTVQFSELGGQIISIKDKDGIEYLWQGDPTYWSGQA
                     PVLFPICGSLRNDWAIYEPAERPTFTGTIPRHGLVRKMMFKNVNSTENSLEFSISSNE
                     ETVKNYPFEFELSINYSLLGNTIRTEYRVKNLEGYRKLPYFIGGHPGFNCPLLDGESY
                     EDYYLEFEKVESCTVPRSFPETGLLDLRDRRPFLENQKTLDLSYQLFEHDAITLDQLA
                     SRKVTLKSKNHQKKLSIAFDDFPYLVIWSTTNQSPFIALEPWSGLSTSLEESDIFNAK
                     RNISYVAPKEVDTKYFNIIIE"
     gene            9805..10644
                     /locus_tag="U1041_001533"
     CDS             9805..10644
                     /locus_tag="U1041_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM4768638.1"
                     /translation="MKKLKNIKPRCFVFICILIFLALGFDSRLQVTHYRLVSPKIFQP
                     IRLALITDLHSSNYGKNQIQILETLEKEEPDIILLGGDIFDDELSDRKTLELLSGLGK
                     FNHTYYVSGNHEIWSNRYDQMLEHLRQQNVVVLSGNSSRVDVRGQSITISGIDDPEYF
                     QKYDTSENLLDQLEDIKGKQISTDFQVLLAHRPELIDTYQKYGFDLVLSGHAHGGQWR
                     VPYLVNGVFAPNQGFLPKYAGGLYEVENSHFIVSRGLAKESTRVPRFFNRPEIIIVNL
                     VNQ"
     gene            complement(11039..11377)
                     /gene="cadX"
                     /locus_tag="U1041_001534"
     CDS             complement(11039..11377)
                     /gene="cadX"
                     /locus_tag="U1041_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000711077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cd(II)/Zn(II)-sensing metalloregulatory
                     transcriptional regulator CadX"
                     /protein_id="HEM4768639.1"
                     /translation="MKKDSICQVDVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQ
                     INIIFYLLAVEELCVCDIACLLNLSMASASHHLRKLANQNILDTRREGKIIYYFIKDE
                     EIRDFFNQLG"
     gene            complement(11389..12003)
                     /locus_tag="U1041_001535"
     CDS             complement(11389..12003)
                     /locus_tag="U1041_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000615743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEM4768640.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLNYIPSKEILGLLGLIPIFLGLKVLLLGDSDGEAIAKEGLSK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVVLLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFISVVYLGLGIYILIENNSFDMLWNVLG"
     gene            complement(12296..12445)
                     /gene="rpmG"
                     /locus_tag="U1041_001536"
     CDS             complement(12296..12445)
                     /gene="rpmG"
                     /locus_tag="U1041_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM4768641.1"
                     /translation="MRVNITLEHKESGERLYLTSKNKRNTPDRLQLKKYSPKLRKHVI
                     FTEVK"
     gene            complement(12461..12643)
                     /gene="rpmF"
                     /locus_tag="U1041_001537"
     CDS             complement(12461..12643)
                     /gene="rpmF"
                     /locus_tag="U1041_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEM4768642.1"
                     /translation="MAVPARRTSKAKKNKRRTHYKVAAPTVKFDETTGDYSRSHRVSL
                     KGYYKGRKIAKAASAE"
BASE COUNT         4188 a         2133 c         2594 g         3955 t
ORIGIN      
        1 caaagatata aagtaaataa tgtaacaatg caaattttag atagtaatgc tgatgtagtt
       61 ggagaataca ccaaacaagg agttattgta tttaaaaatg attcccaaaa tgaaagtcat
      121 tatattctga agtcttctcg tttatacaaa aatacaacta aaaaataata ttgaacaact
      181 gttcaaaatt ccaacatctt cttgtttatt tttgatataa tgtaaaaaaa caacaaagga
      241 ttaaacatga ataaacgaga acgactagaa gaaattacac gtttggtaaa caaaaaaggg
      301 acggttcgaa tttctgagat tgttgaattg ctaaatgtta ctgatatgac tgtccgacgt
      361 gattttatag aattggaaga gcagggggtc ttaacaaaaa tccacggcgg tgctagaagt
      421 aataaggctt ttcaatatcg ggaatattcc cattctgaga aacacattca gaataaggaa
      481 gccaagcaag agatagcgga aagggctgca cagctgatag aagatggaga cacggtattt
      541 ttagggccag gaacaacagt ggcctttctg gctgaggcca ttaaaaatcc tcgcctaaca
      601 gtcatcacaa actgtatgcc tgtttttacc atcctatcac aaaagaagac tgaggatttt
      661 caagtctttc ttctgggggg agaatatcgc caagtgacag aatcttttgt aggagaaatt
      721 accaatacaa gtttagaaaa aatgcgattc agcaagattt tcttttcagg taacggactt
      781 aagggaactg atgtcatgac ctctacccta gctgaagcct atacgcaaaa tattgccatt
      841 aaacattctt tagaaaaata tctactgcta gatgcctcga aaatcggaaa agatgatttt
      901 acttcctttt gtgatttgca tgatgtaact gctctagtaa cagatatgaa tgcaaaggat
      961 gaaaattacc aattattaag taagcacatc gaaataatca ctacaaaatc ataaagttat
     1021 caaaaccaac agcaaaatgt tggttttttg tttgcatacg aaaaaaataa acaaaaataa
     1081 aacaaaatat gttgactttg tgtttgtttg gttgtataat ttaaacataa aaagcgaaaa
     1141 cgctttttct aagttttgca aaacaaagat tttctgccaa atatggctac aactttctat
     1201 ttttgttagg agataggtta tgacaatcat tatcggtgct gatccagcgg gctcaaaact
     1261 aaaagacgtt attaaagatt atttgctaga aaaatcatat gactttaaag atgtcagtga
     1321 tggaagtgat tttgttgata caactttggc agtagttgca gaagttaatc aagaggaagg
     1381 aaatcttggc attgtgattg atgcttatgg tgttggtcca tttatgactg caactaaagt
     1441 caaaggcatg atcgctgcag aagtttcaga cgaacgttct gcctatatga caagaggaca
     1501 caacaattcg cgtattatta caatcggtag tgagattgta ggagaaggaa ttgctaaaaa
     1561 tatcgttaaa ggatttgttg aaggtgagta tgatggtggc cgtcaccaaa ttcgtgtcga
     1621 tatgctaaat aaaatgtgct aattgttgta aacaaaggag aataagagat gaaaattgca
     1681 atcggttgtg accacattgt aacctatgaa aaaatcgctg tggtagatta tttgaaaaat
     1741 caaggatatg aagtgttgga ctttgggact tatgacaatg ttcgtactca ttacccaatc
     1801 tttggtaaaa aagttggtga agcagttgtg agcgggcaag cagatttggg aatttgtatt
     1861 tgtggaacag gtgttggaat caacaatgct gtaaacaagg tacctggtgt tcgatcagcc
     1921 ctggttcgtg atatgacctc tgcactctat gcaaaagaag agttaaatgc caacatcatt
     1981 ggttttggag gaaagattac aggtgagttg ctcatgtgtg acatcattga agccttcatt
     2041 aaagcagaat acaaaccaac tgaagaaaac aaacgtttga ttgaaaagat tgctgcagtt
     2101 gaaacgctca atcaagagca ggctaatcca gagttcttta cagaatttct tgaaaagtgg
     2161 gatcgtggag aataccacga ctaggaggct cacatgattt tgacaatcac tttaaatccg
     2221 tcagttgata ttgcctatca attggatacc tttcatttgg atacggtcaa tcgagtagaa
     2281 aacgttcaaa aaacagctgg aggcaagggg ctcaatgtca cacgagtttt gaaacaaatc
     2341 ggtgaagatg ttgtagcaac aggctttatt ggcggtgaga ttggaagcta tatcaagaaa
     2401 caactcactc gaaatgatgt taaaaactcc tttgtggaaa ttgggaatga aacacgtaac
     2461 tgtattgcgg ttcttcatga tggcaaacag acggagattt tagaacaagg cccaactatt
     2521 caagaacatg aagccttgaa ttttattgaa caccttgaaa ttactctgaa caatgtagat
     2581 gtagttgtca tttcaggaag tttgcctaag ggacttgcta gcaattatta tgttgagatt
     2641 gtagaacttt gtaaaaaatt cggtgtagct gttgttttgg attgttctgg tgaggcgctg
     2701 aaaaacgttt tagaaagcca gcagaagccg acagttatta agccgaatac agaagagtta
     2761 tcacaactga ttggtaaaga agttactgat gatattcaag agttgaaatc agttttgtct
     2821 ggtcaacttt tccaaggaat tgagtggata gtcgtctcat taggggcaca gggggctttt
     2881 gccaagcaca atgataagtt ctatcgtgtc agaattccaa aaatcaaagt cgtcaatcca
     2941 gtaggatcag gagattcaac tgttgcaggt attgcagcag gtttggtaca tgctttacct
     3001 gatgaagaat tattaaaaaa tgctaatgtt ttaggcatgt taaatgccca ggaagaacag
     3061 acgggttacg tcaatttaga aaatgcagaa tcgttgtatt ctcaaatcga agtcgaggag
     3121 gtataatatg gtagtaacag cagataaaag aaaatacatg gaaaaagtaa gcaatgaagc
     3181 aggtattatt tcagctttag cttttgacca acgtggcgcc ttgaaaaaaa tgatggcaaa
     3241 acatcagaca gaagaaccta ctgtggagca gatggaagaa ctaaagaaac tagtttcaga
     3301 agaattaaca cagttttctt cctcaattct gttagatcct gaatttggtt tgccagcatc
     3361 acgcgcccgt gacgagcagt gcggtttgct cctagcttat gaaaaaactg gctatgatac
     3421 cagctctact agtcgcttac cagattgcct agtagagtgg tctgtaaaac gactaaaaga
     3481 agcaggggca gatgcgatta agttcttact ctactatgat gttgatggtg atccatacgt
     3541 caatcttcaa aaacatgcct atattgaacg cttgggttca gaatgtcagg ctgaaggttt
     3601 accattcttc ttggaaattt tgagctatga tgaaacgatt gaagacaatg ccagtgtgga
     3661 atttgcaaaa gtcaaacctc gaaaagtaaa tgaggctatg aaagtatttt cggatgaacg
     3721 ctttggagtg gatgttctca aggtagaagt acctgtgaac atgaattttg tagaaggctt
     3781 tggaacaggg gaagtcgtct atacaaaaga agaagcagct gaatatttcc gtcaacaaga
     3841 agcatcaact catttgccat acatctatct aagtgcaggt gtttctgcta agcttttcca
     3901 agatacacta gtgtttgcac atgaagcagg tgctaaattt aacggtgttc tctgtggtcg
     3961 tgcaacttgg gcgggtgttg tgccagtcta tattgaacaa ggtgaaggag ctgcgcgtga
     4021 atggttacgt actgttggtc gtgaaaatat tgagggactt gatgcagtct tgtctcaaac
     4081 agcaacttct tggctagaaa aataattgaa aaataaccat tttcttaaaa gaaagggttt
     4141 acattttctg agaatatgct ataataatct catcagcaag aatagagtgg attgtaacta
     4201 attcgattag gcaagactac aaatggattt gagagtagga tattctcggt ttgtttgtgg
     4261 tctttttttg cttaaaaata taggagggat atatgtttag gattatacag tcactaaata
     4321 ataacgctgc cctggtgaaa aatgaacacg gggaacaggc agtcgtgatg ggattaggta
     4381 taacctttca aaagaagaaa ggggatttaa ttgttaagga caagatagaa aatatttttt
     4441 cgctaaaaaa tgatgaagca aaagaaaatt ttctaacctt attaaaagat attccattag
     4501 attttatttc ggcaacctac acggttatta atcatctggt agaaacttat cattaccctg
     4561 tacaagaata tctatatgtg acactgacag atcatatcta ttgtgcatat caggcggttt
     4621 taaagaatac ctatcaagaa agtaggctac ccaatatttc agccgaatat ccattagaat
     4681 ataaaatggc gcgtgaagcc ttaactatgt ttcgtgaaaa gttgctaaat gattttccaa
     4741 atgatgagat tggtaaaatt gcacttcact taatcaatgc aaaaggtgaa acaattcatc
     4801 ccactagtga agaacatgac atcagtaaga aaattattgc tgaggttgaa caaattttga
     4861 tagagcatgg gattaaacgc tcaaaagaaa atagcaattt ttatgatcgc tttatgattc
     4921 atttgtccta ttttctgaat tacttagata gatcccatca atcaaatgaa tcgattgcta
     4981 gtttggaaca gtacatcaag ctccagaatc caagagccca tcaggttgga agtcagattt
     5041 ttgagatgat tacatcattg gttgatgagc ctgtcaatga cagtgaaagg ttctatattg
     5101 tgttacatat tcaacggttg ttgtaaatca attcaatttt aaaaggaggt tcatattatg
     5161 aacagagaag aaattacgtt attaggtttt gagattgttg cattcgctgg tgatgcccgt
     5221 tctcgtttga tggaggcact ggctgctgct caaaaaggtg attacgcaaa agcagaagaa
     5281 ctagttgaag ctgccaatgc ttgtattgtt gaagcccacc atgctcagac aagtttgttg
     5341 cagaaagaag cggctggtga ggatttagcc tttagtgtga cgctcatgca tggccaagac
     5401 catctcatga ccacattatt attgaaagac atgatgagtc atatgattga actttacaaa
     5461 cgaggtgata agtaatgaat aaattgattg aattcattga gaaagggaag cctttctttg
     5521 aaaagatttc gagaaaccct tatttaaggg ctatccgtga tggttttatc gctgccatgc
     5581 cggttatctt gttctcaact ctctttctaa tggtagcatt tgtacctaat atctttggat
     5641 ttacttggtc tgatgaagca gttgcggcta tcatgaaacc ttacggttat acaatgggta
     5701 ttgtagctgt cttagttgca ggaacgaccg caaaatcttt gacagatgcg tttaaccgtc
     5761 aattgccaaa aaccaatcaa atcaacttca tttcaaccat gattgcctca atttcaggtt
     5821 tcttattact ggcttctgat ggtattgaag gtggatttgc caatggttac atgggaacta
     5881 agggactttt gacagccttt ctagcagcct tcattacggt taatatctat aaggtctgtg
     5941 tgaaaaacaa tgttaccatt cgtatgccag acgaagttcc accgaacgta tcccaggcat
     6001 ttaaagatgt gattccatat gcattgtcta tctttgtctt gtatggaatt gatcttgtga
     6061 cacgtcaatt ccttggaaca aacgttgctg aggcgatcct gaaattattt gagcctctat
     6121 ttacagccgc agatggttat gttggtatta caattatctt tggtgcctat gctttgttct
     6181 ggtttgtagg gattcatggt ccatctattg tggaaccagc aattgcagcc attacttatg
     6241 ccaatattga aaccaacttc cagcttctac aggcgggtca acatgcggac aaaatcctga
     6301 cttcaggtac tcaaatgttt atcgtaacaa tgggtggtac aggtgctacc ttggttgtgc
     6361 cattcatgtt tatgtggttg actaagtcta aacgaaataa agcaattgga cgtgcttcag
     6421 ttgttccaac tttctttggt gtaaatgaac cgatcttgtt cggtgcacca cttgtactca
     6481 acccaatatt ctttgttcca ttcatcttag ctccaattgc taacgtatgg attttcaaat
     6541 tctttgttga tacgttaaaa atgaacagtt tcagcgtcaa cttagcatgg acaactccag
     6601 gaccgttggg gattgtaatg ggaacaaact ttgctccact cgcctttgca ctagctatct
     6661 tattggtcgt tgtcgatgta cttatctatt atccattctt gaaagtttac gatgagcaga
     6721 ttctcgctga agaacaatca gggaaagttg aaaatagctt gaaagagaaa gtggcggcta
     6781 actttaatac tgccaaagcg gatgctattc ttgaaaaagc tgcagtcgac accgaaattt
     6841 ctgaacaaac caacgttctg gtactttgtg cagggggtgg tacaagcgga ttgcttgcca
     6901 acgctctaac taaagctgca aaagaatatg gtgttccagt tacagctaca gcaggaagtt
     6961 atggggcgca ccgtgagatt ttgccagagt atcaattagt catccttgca cctcaagtag
     7021 catcaaacta cgatgacatt aaacaagaaa ccgatgcatt gggtattaaa cttgccaaaa
     7081 ctgaaggggc tcaatacatt aaactcactc gtgatggtca aggtgctctt gactttgtca
     7141 aacaacagtt ttagaaactc tattcacggt tcagcacttc catctgaggc tagtttttca
     7201 gctactcatc gttagttttt ttcaaaatac agtcagtatt ccctcaaaaa accgccttga
     7261 ttagcgaaaa actatctctt atatacaagc acttcacttg tgaatacagg ttcttaatca
     7321 aaaggggagg gagttatcat ctccaactcc taccccttta tttatttttg atagaagaag
     7381 gtaggcatat ggttaaaaca ttaccgaaag attttatatt tggtggagca actgctgcat
     7441 atcaggcaga gggtgctaca cagacggatg gaaaaggtcg tgttgcgtgg gacaagtatt
     7501 tagaagataa ttactggtac actgcggaac cagcttctga tttttataat cgttatccag
     7561 ttgatttaga actaagtgaa caatttgggg taaatggcat tcggatttca attgcgtggt
     7621 ctcgtatttt cccaacaggc tttggagaag tgaatccaaa gggaatagag tattaccata
     7681 aattatttgc ggaatgccat aaacgtcacg tagaaccatt tgtaacgctt caccattttg
     7741 atacaccaga aacgctacat tctaatggtg actttctgaa tcgagaaaat attgagcact
     7801 tcgtcaatta cgcagcgttt tgcttcaaag aattccccga agttaattac tggacaacct
     7861 ttaatgaaat cgggccaatt ggtgacggac agtatcttgt agggaagttc ccaccaggga
     7921 ttcagtatga cttagctaag gtattccaat cccatcataa tatgatggtt tcacatgcca
     7981 aggcagttaa gctctacaag gatgctggtt atagcggaga aattggtgtt gtacatgcat
     8041 tgccaacgaa atatccttat gatccaagca atcctgacga tgttcgtgca gcggaacttg
     8101 aagatattat tcacaataaa tttatcctag atgcaacata cttaggttac tattcagaaa
     8161 aaactcttga aggtgttcgc catattctga aagtaaatgg tggggaatta gaccttcgtg
     8221 atgaagattt cgctgcctta gatgccgcaa aagatttgaa cgacttcttg ggtatcaatt
     8281 actatatgag tgattggatg agggctcatg acggtgagac tgaaattatc cataatggta
     8341 agggtgaaaa gggaagttct aagtatcaaa tcaagggagt tggtcgtaga gaatctccag
     8401 tcgatattcc aaaaacggac tgggattgga ttatttaccc acaaggcctt tatgatcaaa
     8461 tcatgcgtgt gaaaaatgac tatccaaact ataagaaaat ctacatcact gaaaatggtc
     8521 taggctataa agatgaattt gtagatggta cagtctatga cgatggtcga attgattatg
     8581 tgaaaaagca tttagaagtg atttcagatg ccatctcaga tggtgccaat gttaaaggtt
     8641 atttcatctg gtccttgatg gatgtatttt cttggtcaaa tggatacgag aaacgatatg
     8701 gtttgttcta tgttgacttt gagacccaag aacgttttcc aaagaaaagt gcttattggt
     8761 ataaaaaagt atcggaaaca caggttattg aataagacta atacaaggat gcctagctca
     8821 agttagcatc cttgttttca tataagggag gcagttttta tgctcgaatt aaaaaatgag
     8881 aacttaacag tacaattttc tgaattaggt gggcaaatta tttctattaa agacaaggat
     8941 ggtatcgagt atctttggca aggagatccg acctattgga gcggtcaagc accagttcta
     9001 tttccgattt gtggaagttt acgaaatgat tgggctatct atgaacctgc agaaagaccg
     9061 acatttacag gcacaattcc aagacatgga cttgtgagaa aaatgatgtt caaaaatgta
     9121 aatagtacag agaactcttt ggaattttct atttcatcaa acgaagaaac cgtaaaaaat
     9181 tacccttttg aatttgaact ttccattaac tactcactac ttggcaatac aattcgaact
     9241 gaatatcggg tgaaaaacct tgagggatat agaaagctac cttactttat tgggggtcac
     9301 ccaggtttta attgtccctt gttggatggt gagagttatg aagactatta tttagaattt
     9361 gaaaaagtag aatcttgtac agtacctaga agttttccag aaactggctt acttgatctg
     9421 cgagaccgcc ggccattttt ggaaaatcaa aagaccttgg acttgtccta tcaattgttt
     9481 gagcatgatg ccataacatt ggatcagtta gcatcacgaa aggtgacctt gaaatccaaa
     9541 aatcatcaga aaaaactttc gattgcattt gatgattttc catatttagt gatttggtca
     9601 actacaaatc agagtccctt tatcgcatta gaaccttgga gcggactctc tacttcattg
     9661 gaagaatctg atatcttcaa tgccaaacga aatattagtt acgttgctcc aaaagaggtt
     9721 gatacaaaat attttaatat tattattgag taaccttttg aaaatgtttg ttcgttacag
     9781 aaatttggta aaatagttcg aataatgaaa aaactaaaaa atattaagcc acgatgcttt
     9841 gtttttattt gtatcctaat ttttcttgct ttaggctttg acagtcggct tcaagtaact
     9901 cattacaggc ttgttagtcc caaaatattt cagccaatca gacttgctct aattactgat
     9961 ttacactcat caaattacgg taaaaatcag atacaaatct tggaaacatt agagaaagaa
    10021 gagccagata tcattttatt aggtggagat atttttgatg atgaactttc tgacagaaaa
    10081 actctagaat tgttaagcgg gctgggaaaa tttaatcata cttactatgt gtcaggtaat
    10141 catgaaatat ggagtaatcg atatgatcag atgctggaac atctgagaca acagaatgta
    10201 gtcgtattat ctggaaatag tagtagagtt gatgtaaggg ggcagtccat cactatttca
    10261 ggcattgatg atcctgaata ttttcaaaag tatgatacta gtgagaattt gctagaccaa
    10321 cttgaagaca taaaagggaa gcaaataagc actgactttc aagttttact agcgcaccga
    10381 ccagaactaa ttgatactta tcaaaagtat ggatttgatt tagtgttatc tggtcatgcg
    10441 catggaggac aatggagagt gccttatttg gttaatggtg tatttgcacc taatcaaggt
    10501 tttcttccga aatatgcagg tggtttatat gaagttgaaa attcgcattt tattgtaagc
    10561 aggggtctgg ccaaagaatc tacacgagta ccaagattct ttaatcgccc agaaattatc
    10621 attgtaaatc ttgttaatca gtaacttcgc tcttctctaa tcactcaaaa acccactgac
    10681 ttaattagcc agtgggtttt attacttatc caaatcaaaa acttatttca aaaaaggtag
    10741 tgattcggtt gatttttatt gcaatgtaat gaaaatcaat atttcaaaaa tcgcataaaa
    10801 tcaaggtttc taccgcctat tgacgtgtag tgaatcccta ttttacatca gtaaagatta
    10861 agtattgtct attttagctg ttagaaacgt ttatatatca acgtttttgt aatgttcctt
    10921 agtaaaaggt agagtgaatg gtagagtagt tattgcgtta gttcagcaat cttatcaaga
    10981 taaataccca cagcttctaa cattcgttga ggtgctaatt cagcgtaagt atccatggtt
    11041 atcctagttg attaaaaaaa tctctgattt cctcatcttt tataaaataa tatataattt
    11101 tcccctctct tctagtgtcc aagatgtttt gattggctag tttacgaaga tggtgggagg
    11161 cagatgccat actgagattt agtaaacagg ctatatcgca gacacagagt tcttcgacgg
    11221 caaggagata aaagatgata tttatctgtt tattatcggt aaattttgat aaaatgcgaa
    11281 gtgatttttg gactttttcc ttttcaaggt agttcgttgc ggttgtaaca ttttgttgat
    11341 taataacatc cacttgacag atactatctt ttttcataat tttttctcct agcctaacac
    11401 attccatagc atgtcaaaac tgttgttttc aatcaggata tatatcccca atcctaaata
    11461 aacaacggaa ataaaccatc tgctatattt ttccaaagtt tctccaacag aagggacttg
    11521 tgccaatttt tgggcagaaa aaaccaagag ataaatcatg actagaaagg taagtaaaac
    11581 cactatcaaa ttcgctaaat ttaaggtagt aaaatatggg acaaagacac caatattgtc
    11641 agcaccacaa cttgcaaaag taatcatagc gactagaaaa atcaggtttt tattatcttt
    11701 gctcaaacct tctttggcaa tagcttctcc atcagaatct cctaaaagca aaactttgag
    11761 gcctaggaaa attggaatca aaccgagtaa acctaaaatc tctttactag gaatataatt
    11821 taagacaaat gcaaaaagca aacttagcaa tattagacta acagagccta gaaattgtcc
    11881 taaatagatg ttaatgatgt cttttctgct ttttcttttg gcaaaaaata acattaggat
    11941 aataagtaag tctacggctg tcccagaata caggattatt gaagtaacaa cattttgaat
    12001 cataaaacac ctcattcaaa tatatttttg aatgtatttt aacattaaac attgtagatg
    12061 tcaacttcag ctctaccaaa atatagataa gaagttagtg taccaaatat taaaaagccc
    12121 tgccatcgaa atgataacag ggcttaactt caatatccaa atgatatatt catctaaaaa
    12181 aggtagagta aaaggtagag ttcttattga tttgtagtgc gatataatga gtttcaaaaa
    12241 atcaaaaatc gcttaaaatc aatgttttga cgtctaatga cgtgtagtga accccttact
    12301 taacctcagt aaaaatcacg tgcttacgca attttggtga gtattttttc aattgaagac
    12361 ggtctggagt gttacgtttg ttttttgaag taaggtacaa acgctcacca gattctttgt
    12421 gttcaagtgt aatatttacg cgcatggtat ctcccttcta ttattcagct gaagcagctt
    12481 tagcgatttt acgtcctttg tagtatcctt tcaaagatac acggtgagaa cgtgagtaat
    12541 ctccagtagt ttcatcaaat ttcacagttg gagctgctac tttatagtga gtacgacgtt
    12601 tgtttttctt cgcttttgaa gtgcgacgtg caggtactgc catttctttc ttcctccatt
    12661 aaatgtcagg gtcaagccct ttttcaatct aaaatagtgc gtatgacttt cgtcaacttt
    12721 aacagtataa caaaagtttt ttgtaaagta aagttacttg acagattttt tgaaaaaaat
    12781 ttgttcaaaa tttgttcaat tgtattctcc tatttttatt taagtattgc acttaatttt
    12841 tcttcccccc aaattttttg acaaacttct
//
LOCUS       DASFQS010000064        12831 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.066, whole genome shotgun sequence.
ACCESSION   DASFQS010000064 DASFQS010000000
VERSION     DASFQS010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12831
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.066"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..730
                     /locus_tag="U1041_001538"
     CDS             <1..730
                     /locus_tag="U1041_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM4768643.1"
                     /translation="INKNQHKYSSGKYISHVYYRGTDGSMTAVGGTSVELPSTRSYTV
                     YIDPGHGGRDSGASYGGVHEKNLALSVSNKLRENLLKYGINVLMTRTGDYDVDFKTER
                     SRMTNASNADLFISIHFNATGAGVSNATGIETYWYQYDPEYQPKINKEMHNNPTRLAE
                     SEILANKVQESLIKETGAVNRGVRRETFAVLRETAIPAILVELGFMDNPSELQVIKQD
                     SYHTRLAKALAQGVMNWYGAVEGK"
     gene            808..1236
                     /locus_tag="U1041_001539"
     CDS             808..1236
                     /locus_tag="U1041_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEM4768644.1"
                     /translation="MEQSSKANSILSSVMLSQAILESAWGTSYLATHGNNLFGIKADA
                     AWTGDTIEIITNEYRDGEKKQEKHLFRKYNSWNESVADYAKFFTSTPWRIKNYQSFRE
                     ATDYQQAILALRQSGYATDPKYGEKLRSIIENYKLYYLDS"
     gene            1564..2712
                     /locus_tag="U1041_001540"
     CDS             1564..2712
                     /locus_tag="U1041_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1972 domain-containing protein"
                     /protein_id="HEM4768645.1"
                     /translation="MKHVFIIGSRGLPAKYGGFETFVQQLVSHQQSERIHYHVACLSD
                     TSHHQHSTYLGADCFTINPPKLGPARVIAYDMMAITYALKIIKEQQIERPIFYILGNT
                     IGGFIVPFAKQIHSVGGTLFVNPDGLEWKRAKWAKPVQRYLKFSEKMMVKYADLIIAD
                     NEGIEDYIQSEYSATNTRFIAYGTDLSPTKLIKESEQVRQYFTNWGIREKEFYLIIGR
                     FVPENNYLAAIKEFMKSDTKRDLVIVANHEGSAYFQKLKDETGLASDKRIKFVGTVYD
                     QELLKYLRKECRAYIHGHEVGGTNPSLLEALAQTNENLVLGVDFNRKVALEGARYWSK
                     ESGSLSQLINQIDENAEAVELGEIAKKHMKDEYTWEKIVQEYEELFLQ"
     gene            2709..3641
                     /locus_tag="U1041_001541"
     CDS             2709..3641
                     /locus_tag="U1041_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4768646.1"
                     /translation="MKVNILMSTYNGQQFLAEQIRSIQEQTYTDWTLFIRDDGSSDRT
                     REIIKDFAEQDQRVHFIDVETDENLGVIKSFHRLVHYDTADFYFFSDQDDVWLPNKLE
                     VSLKKAQAYPTNLPLMVYMDLKVVNQNLEVMAESMVKSQSHHANTELVQELTENTVTG
                     GVAMINHHLAEMWQVTEDILMHDWYLALLASAFGNLVFIDQPGELYRQHSDNVLGART
                     LSKRFKKWIRPHILFAVYWDLIKNSQKQARHLLQMPLSQSNRELIEAFATIMDKPMLE
                     RFRILRKYGLRKNKAFHTFVFTTLIVTKFAYIKE"
     gene            3644..4447
                     /locus_tag="U1041_001542"
     CDS             3644..4447
                     /locus_tag="U1041_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019802672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768647.1"
                     /translation="MELFSTKNRILLKELIKTDFKLRYQGSVIGYLWSILKPLMLFAI
                     MYVVFIHFLRLGGDVPHFPVALLLGNVIWSFFSEATNMGMVSIVNRGDLLRKLNFPKE
                     IVVLSAIFGAAINFSINLVVVLIFSIFNGVQFSGTILLAIPLFLELFLLATGIAFILS
                     TFFVRFRDLSQIWEVIMQAGMYATPIIYSISFVLEKSELAAKMIMLNPMAQIIQDMRY
                     FVIDKANLPVWQVIENNAIVFIPYVIPIVVFVIGVNVFNKHSKKFAEIL"
     gene            4447..5673
                     /locus_tag="U1041_001543"
     CDS             4447..5673
                     /locus_tag="U1041_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003075697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768648.1"
                     /translation="MTGKNIAVKVDHVSKFFKLPTEATQSLRTTMVNRLRGIKGYREH
                     HVLKDVSFEVEKGDFFGILGRNGSGKSTLLKIISQIYVPEKGSVIVDGKLVSFIELGV
                     GFNPELTGRENVYLNGALLGFSQEEIDAMYDDIVDFAELRDFMHQKLKNYSSGMQVRL
                     AFSVAIKAQGDILVLDEVLAVGDEAFQRKCNDYFLERKKSGKTTILVTHDMGAVKKYC
                     NKAVLIENGLVKTFGNPDDVANQYSLDNVSQPVKIQQTVEAEETIQEQAKPKVENFHV
                     EMLSSQTVSPTDELVFEFSYQVLENDLKTHIAFSFIDVDTNVGVYNDNSWDNMQSGAG
                     HKKLIYKCRLPYFNRAKLKLIARVRDERQNDLAISSGEKPPVFILERKVPITLFSEYD
                     SNTGMLHRNGAWETTD"
     gene            5691..7415
                     /locus_tag="U1041_001544"
     CDS             5691..7415
                     /locus_tag="U1041_001544"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4768649.1"
                     /translation="MNVLFISPTGTLDNGAEISIVNLMKYLSEVGINVHNVFPESQHS
                     TSQKYTETMLEYGIVGHPVSTVQWWWEEAPNSKDIRPDLLSFSYQHAVSKIRQIIRDK
                     EIDLVISNTVNVFQGAVAAACEDVRHIYLIHEFPFGEFEYYKHKIEFIDQYSDAIYAV
                     KGELFNNLSNYFSKEKLKEFIPYSAVKYYENIVGEETRIVSIGKLTERKNQLELITAY
                     HKLGRPDIPLVFIGAWEENYKQKCDLYIQNNELNNVHFLGYQKEPWSLVTDQDICVFT
                     SKLETFGLVYIEALLNAIPTIISNNPGHLSVFDIFQNGTLYPLGDCDSLVIEINRLIE
                     EFSFYKAKARAVVEEYRKFYKVQNVYKTLILDITLEQVPVKKSLRDINFLLDFSISKK
                     EFLNRLQNQVSIYFSTEEQPFSEENKKVYQLRYEDKIEIFIDDNITELRVDLSELPSI
                     YSDVRVSIAGNDNYLNPIQSNGLQYKNGYIFLELDPYLVYDVRAYAGKTACIEYASVM
                     SGNLASSDGTEILESIRNKFQAVEILKESLKERERELEKVRQDYQTIVTSRRWIIATK
                     LINFFRRK"
     gene            7415..9160
                     /locus_tag="U1041_001545"
     CDS             7415..9160
                     /locus_tag="U1041_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-Rha alpha-1,3-L-rhamnosyltransferase"
                     /protein_id="HEM4768650.1"
                     /translation="MKRLLLYVHYNKYDNLSSHVVYQLEKMRPLFEEVLFISNSKLSK
                     LDQERLETSGLITDFLQRKNSGFDFVAWKDGFQKLGFEHISSYDSVTIMNDTCYGPIW
                     DIKEVFGRFESDLSTDFWGMTNHRATKRFKEHLQSYFVTFKKQVVQSSEFKKFWSNVR
                     EYSIVQDVIDYLESPVTNIFVDAGFNYKAVFDTTTEELHHMPLPDFSYYNVAKIIEKR
                     VPFIKVKALEGNPQQTSFVIDELAKISGYPTELIVEHMSNMFTPAAYNLLKYKYLDKN
                     IQPEFLDKKVAIHLHTYYVDLLESFLDIFSTFSFEYDLYLTTDKGEKADQIREILSKR
                     EAIASVHITGNRGRDVLPMLKLKEQLSNYDFIGHFHTKKSLEAEFWAGESWRRELLEM
                     LVKPSDAIVSQLAQNDKLGLVIADIPTYFRYISLDPFYEGALSTDMNVLWERMGMKKE
                     LDFQEFSTYVMSYGTYVWFRYDALKPLFDIDIQDEEVPEEPLPLATILHSIERMLVYI
                     AWGNDYDFLISKNPVTLPPFVDVTLLNKREGIRFNPVAPVDFTYFGGLTGALKYFFFI
                     NKSIAKYVVKRLLKR"
     gene            9160..11649
                     /locus_tag="U1041_001546"
     CDS             9160..11649
                     /locus_tag="U1041_001546"
                     /inference="COORDINATES: protein motif:HMM:NF013080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEM4768651.1"
                     /translation="MNKLKDLLVLKNYENFLQLIPYSKFAYYTSVIVAIFLLIFIGSI
                     IPVQSLLASQETFSAQLPFWLGLSGIIILYFASLFSRVLNLKNFLQFLLAYFFILIIS
                     YGIFLGININNPTIDMWDFSGNGFFQLKVIRTIFSILLLAYAVRFSPRLNAFIQKYII
                     CLNETFLISTILVYCILSNSLFIDFFNQQIGNSLSFGIFEFFNEVKNILFLPFILAWC
                     GSIVTYKAVCDFWENRSSIWTATFTSVFLAVIFNFTLQLGIKGEEKLLDRYIFQGAVS
                     YQILLLSIIFLLTYVVVNRYISSTFLIIFVFSIISTVNAVKETMRNEPLLISDFTWIT
                     ELSTVAGFVDGNIIGKIIQYSVLLVSITIALHFTILKGKVIGYWKKRLALAVSLLGIL
                     GMIFNIFSNSDQGKIKENIPIISNLNNKDDIAWFGFSTNARYKSLMYVWTKQLTKQIM
                     IKPEAYSKEKIEEIVNKYSKLASEINQSRTSNIEEQTLIFVLSESFSNPARVPNVQVS
                     KNVIPNIEEIMSQTTSGIMKSDAYGGGTANMEFQSLSGLPFYNFSSSVSLAYIEVVPK
                     LNYFPSISNYFAPEDRIVIHPASAKNYNRNNIYKDLGFSKFIAQSDTDFPIGNPVAVG
                     ALIGDQTVYSNVLDNIQQDKSQFFSVITMQNHSPWIASEPSEILATGVGFTTEENEKL
                     TSYSRLLSYTDEATREFLNRLSELDKKVTLVFYGDHLPGLYPQATFKEKPESQFQTDY
                     FIWSNKDTQKLNYPYLNSSDFTAALFEHTNSKVSPYVALLTEVLNKASIDKIDLTEEG
                     KTVADDLYLLQYDITVGKGYIQDYLSFFEIN"
     gene            11659..>12831
                     /locus_tag="U1041_001547"
     CDS             11659..>12831
                     /locus_tag="U1041_001547"
                     /inference="COORDINATES: protein motif:HMM:NF021436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2142 domain-containing protein"
                     /protein_id="HEM4768652.1"
                     /translation="MKIEKIFLYLAICMIGISVFFMPATEVPDEVKHADIAWHILYPD
                     SDHIMDWESKNDIINNPQPADADVNWSLFRQFFVEKIDTEQISSRFNFELKSISYLPQ
                     FIGMYIGKLIYPSLGVILTFGRLVNAAVYIIAIFYFIKFIRSGKEVLLFVSLLPMMIQ
                     QAGSLSYDVLNHVAIAGFFTFIINLLDRRTFGIKHLFQLLAIAILLAVVKLNNIFLLA
                     VLAFVNFECIDRLTLLNPFLKWFQKHRLVVLSLLSLLVAVVAGVYIHQTVGVKQFATM
                     MFNTLMNNNLNGALNTFLTTGIFGYFGWLTIPLPLWVVFFDIFVLTLLLFVDKSFELP
                     KSEAIVLGMVFPVQVAIIIAIMYFLWTPQILGENASISVGTQGRYFTPFLLYLYPLC"
BASE COUNT         4169 a         1966 c         2492 g         4204 t
ORIGIN      
        1 aattaacaaa aaccaacata aatatagttc agggaagtac atttcgcacg tttactaccg
       61 cggaacagat ggaagtatga cagcagttgg cggtactagt gttgaattgc catcaacacg
      121 ctcctacaca gtctatattg acccaggaca tggagggcga gactcaggag cttcttatgg
      181 aggtgtacat gaaaaaaatc ttgcattgtc tgtttcaaat aagttgcgtg aaaatctctt
      241 gaaatatgga atcaatgttt tgatgacccg tacaggcgat tatgatgtag acttcaaaac
      301 agagaggtca cgaatgacga atgcaagcaa cgcagactta tttattagta tccattttaa
      361 tgcgacggga gcaggagttt cgaatgcgac tggtatcgaa acatactggt atcaatacga
      421 tccggaatac caacctaaaa ttaataaaga aatgcataat aaccctactc gtttagctga
      481 aagcgagatt ttagccaaca aggttcagga gagtttaatt aaagaaacag gtgcagttaa
      541 ccgtggcgta agaagagaaa cttttgcagt ccttcgcgag acagcaattc ctgctattct
      601 agtagagcta ggatttatgg ataatccttc ggagttgcaa gttatcaaac aagactctta
      661 tcacactcgc cttgcgaaag cattggcaca aggtgtgatg aactggtatg gtgctgttga
      721 gggaaagtag gaactgcagg tacaggtatt gaaacaggaa aactttctaa tgatcaaaaa
      781 agtttcatag ctaatctagt acctgcaatt gagcaaagtt caaaagctaa ttctatcctt
      841 tcgagcgtca tgttatctca agccatccta gaaagtgcat ggggaacgtc atacttggcg
      901 actcatggga ataatctttt tggcatcaaa gcggatgctg catggacggg tgatacaatt
      961 gaaatcatta ccaatgaata ccgtgatggt gagaagaagc aagaaaagca cttgtttaga
     1021 aaatataatt catggaatga aagtgtagca gactatgcta agttctttac ctctactccg
     1081 tggagaataa aaaattacca gagttttagg gaggcaactg attatcaaca agcaattctt
     1141 gcgttaagac aatcaggata tgctactgat ccgaaatatg gtgaaaaatt acgatcaatt
     1201 attgaaaatt ataaattata ctatcttgat agctaactca acaaattgtc ttgactattc
     1261 gcctatcggg ataaaattat gataaatttt ttctatttaa aataaaattt gaaaagacta
     1321 cttatggtat gcagttaaat tgtagtggac tgtcatatta agtggtcttt ttattgctaa
     1381 aataataaaa taagtttaaa tggtatttaa cttgaatgta aaatataagt aattgaagta
     1441 tatattaaag caatataaaa tgaatagaac attctgtttt ttgtcagcaa actaggatag
     1501 aattaggaaa aaaaactaaa aaatggtata atgaaaagaa ctgcaatttg atggagagga
     1561 ttcatgaaac acgtttttat tatcggtagt cgtggactgc cagcaaaata tggtggcttt
     1621 gagacctttg tccaacaatt ggtcagtcac cagcaatctg aaaggattca ttaccatgtg
     1681 gcttgtttat cggatacaag tcatcaccaa cattcgacct acctgggcgc agattgcttc
     1741 accattaatc caccaaaact tggaccagct cgtgtgattg cttatgatat gatggcaatc
     1801 acttatgccc ttaaaatcat taaggaacag cagatagagc gaccaatttt ctatatcttg
     1861 ggaaatacca taggtggctt catagtacct tttgcgaaac agattcactc tgttggaggt
     1921 acattgtttg tcaatccaga tggtttggaa tggaaacggg ccaagtgggc taagccagtc
     1981 caaaggtatc taaaattttc tgaaaaaatg atggtcaaat atgctgattt gattattgct
     2041 gataatgagg gaattgagga ttatattcaa tctgaatact cggctaccaa tacacgcttt
     2101 attgcctatg gtacagattt aagtccgact aagttaataa aagaatctga acaagttcgt
     2161 caatatttta caaattgggg aatcagggag aaagaattct atctgattat cggtcgattt
     2221 gttcctgaga acaattatct agcagccatc aaggaattta tgaaaagcga tacaaaacgt
     2281 gatttggtca tcgttgctaa ccatgaaggc tctgcctatt ttcaaaaatt aaaagacgag
     2341 acaggcttag catcagataa gcgaatcaag ttcgtaggaa cagtgtatga ccaagaactg
     2401 cttaagtatc tgcgcaaaga atgtcgagct tatattcatg gacatgaagt tggaggaacc
     2461 aatcctagtc tcctagaagc gctggcgcaa accaatgaaa atttggtttt aggtgttgat
     2521 tttaaccgta aagttgccct agaaggtgct cggtattgga gtaaggagtc aggtagcctg
     2581 agtcaattaa ttaaccaaat tgatgagaat gctgaagcgg tggaattagg agaaattgcg
     2641 aaaaaacaca tgaaggatga atacacctgg gaaaaaatcg tccaagagta cgaggaatta
     2701 tttttacaat gaaagtaaac atactcatgt cgacctacaa tggtcaacag ttcttagctg
     2761 agcaaattcg ttctattcaa gaacagactt acacagactg gacactgttc attcgtgatg
     2821 atggttccag tgatcgaact agagagatta ttaaagattt tgctgaacaa gatcagcgag
     2881 ttcacttcat agatgttgag acagacgaaa atctcggtgt catcaaaagt tttcataggc
     2941 tagttcatta tgatactgct gatttctatt ttttcagtga ccaagatgat gtttggctgc
     3001 caaataaact ggaagttagc ctgaaaaaag cacaagccta tccaacaaat ttgccattga
     3061 tggtttatat ggacctcaaa gttgtcaatc aaaatctaga ggttatggca gaaagcatgg
     3121 taaaatctca atctcatcat gccaatacgg aattggtgca agagttgact gagaatactg
     3181 tgactggcgg tgtcgccatg attaatcatc atcttgctga aatgtggcaa gtaactgagg
     3241 atattttgat gcatgattgg tatctggctc tgcttgcgtc agcctttgga aatttggtat
     3301 ttattgatca accaggggaa ctgtaccgcc agcattctga taatgtttta ggggctcgaa
     3361 cactctcaaa acgctttaaa aaatggattc gccctcatat tttatttgct gtctattggg
     3421 atttgataaa aaatagtcaa aaacaagccc gacacttact acaaatgcct ctatctcagt
     3481 caaatagaga attaattgaa gcatttgcaa ccattatgga taaaccaatg ctagaacgat
     3541 tcaggatttt gagaaaatat ggattgagga aaaataaggc ttttcacacc ttcgtgttta
     3601 caacactgat tgtgacaaaa tttgcttata ttaaggagta aatatggaat tgttttccac
     3661 taaaaatcga attcttttga aagaattgat taaaactgat tttaaactca ggtatcaggg
     3721 gtcagtcatt ggctaccttt ggtctatttt aaaaccactt atgctgtttg cgattatgta
     3781 tgtggtgttc attcatttcc tacgcttagg tggagatgta ccacactttc cagtcgcact
     3841 attactagga aatgtcatct ggtcattttt ctcagaagcg acaaatatgg ggatggtttc
     3901 cattgtaaat cgtggcgact tgctacgaaa attaaatttt ccgaaagaaa ttgttgtctt
     3961 gtccgcaatt tttggagcag ctattaattt ttctataaac ttagtggtag tattgatttt
     4021 ttcaatcttt aatggtgttc aattttcagg gactattcta ttggctattc cattattttt
     4081 ggaactcttc cttttggcaa ctggtatagc ctttatctta tcaacatttt ttgtaagatt
     4141 ccgtgatcta tcacaaatct gggaagtgat tatgcaggca ggtatgtacg cgacaccgat
     4201 tatttactcc atttcatttg ttttggaaaa aagtgagcta gcagccaaga tgattatgct
     4261 caatccaatg gcacagatta ttcaagacat gcgctatttt gtgattgata aagccaacct
     4321 tccagtgtgg caagttattg agaataatgc cattgttttc attccatatg tgattccaat
     4381 cgtcgtgttt gtgattggtg tcaatgtttt taataagcat tctaagaaat ttgcggagat
     4441 tctctaatga caggaaaaaa tattgcagta aaagtagatc atgtcagcaa gttttttaag
     4501 ttaccaactg aggcaacaca gagcttgcga acaacaatgg tcaatcggct gagaggtata
     4561 aaaggatata gggagcatca tgtcctaaaa gatgtctctt ttgaagtgga aaagggtgat
     4621 ttttttggta ttcttggtcg aaatgggtcg gggaaatcga cacttttgaa gatcatttct
     4681 caaatctatg tccctgaaaa aggttctgtc attgtcgatg gaaaactggt ttccttcatt
     4741 gagttgggag ttggttttaa ccctgaattg acgggtcgtg aaaatgtata tctgaatggt
     4801 gctcttcttg gtttttctca ggaagaaatc gatgccatgt atgatgacat cgttgatttt
     4861 gcggaactcc gtgacttcat gcatcaaaaa ctaaaaaact actctagtgg tatgcaggtg
     4921 cgtctagcct tttcagttgc tatcaaggcc caaggtgaca tcttggttct cgacgaagtt
     4981 ttggcagttg gggatgaagc ttttcaacgg aaatgtaatg actatttctt ggaacgcaag
     5041 aaaagtggga aaacaaccat tttagtaacg cacgatatgg gagcggtgaa aaagtattgt
     5101 aataaggctg tgttgattga gaatggttta gtgaagacat ttggaaatcc agacgatgta
     5161 gcaaatcaat atagtttgga taatgtatct caacctgtta aaattcaaca aacggttgaa
     5221 gcagaagaaa ctattcagga acaagcaaag ccaaaagttg aaaattttca tgttgaaatg
     5281 ttatcttcac agacagtttc accgacagac gagcttgtat ttgagttctc atatcaagta
     5341 ttagagaatg atttgaagac acatatagct ttttcattta ttgatgtaga tactaatgtt
     5401 ggtgtctata atgataattc atgggataat atgcaaagtg gtgcaggaca taaaaagttg
     5461 atttataaat gcaggttacc atactttaat agagctaaat tgaaattgat tgccagagtc
     5521 agagatgaaa gacaaaatga tttggcaatt tcttcaggag aaaaaccacc agttttcatt
     5581 ttggaaagaa aggttccaat tactctattt tcagaatatg attctaatac aggtatgcta
     5641 catagaaacg gagcatggga aacgacggat tgaaattttg gaggcgtcag atgaatgtat
     5701 tatttatttc acccactggt acattagata atggtgcgga gatttctata gtaaatctaa
     5761 tgaagtattt aagtgaagtt gggattaatg ttcacaatgt atttccagag agccaacatt
     5821 ctacttctca gaaatataca gaaacaatgc ttgagtatgg gattgttgga cacccagttt
     5881 caactgttca atggtggtgg gaagaggcgc caaactctaa agatattcgt ccagatttat
     5941 tatcattttc ttaccaacat gcagtttcaa agatacgaca aatcattcgt gataaggaaa
     6001 tagatttagt cattagtaat actgtcaatg tgtttcaagg cgctgttgct gcagcatgtg
     6061 aagatgtccg tcatatctac ttaattcatg aatttccatt tggtgagttt gaatattata
     6121 aacataaaat tgagtttata gatcaatatt cagatgcgat ttatgcagtt aaaggagaat
     6181 tatttaataa cttaagtaat tatttctcta aggagaaatt gaaagaattt attccctact
     6241 ctgctgtaaa atactatgaa aatatagttg gcgaagaaac tcgaattgtt tctataggaa
     6301 aattgactga acgtaagaat caattagagc ttattacagc gtaccataaa ctaggtagac
     6361 cggacatacc acttgtcttt attggagctt gggaggaaaa ctacaagcaa aagtgtgact
     6421 tatatatcca gaataatgag ttgaacaatg tacacttttt aggctatcag aaagagccat
     6481 ggagtttggt aactgatcaa gatatttgcg tatttacttc aaagttagag acatttggtt
     6541 tggtatatat agaggcttta ttaaatgcta tcccaacaat tatttcaaac aatccaggtc
     6601 atttatctgt atttgatatt tttcaaaatg gaaccctcta ccctttgggg gattgcgata
     6661 gtttggtgat tgaaattaat aggttgattg aggaattttc attttataaa gctaaggcaa
     6721 gagcagtagt tgaagaatat cgaaaatttt acaaagtgca gaatgtttat aaaacattga
     6781 ttttagatat aacattagaa caagtgcctg ttaagaaatc acttcgcgat attaatttct
     6841 tgttggattt ttctatatct aaaaaagagt tcttgaatag attacaaaat caagtttcaa
     6901 tttatttttc aacggaggag cagccatttt ctgaagaaaa taagaaagtt tatcagttaa
     6961 ggtatgaaga taaaattgaa attttcatag atgataatat tacggaatta agggtagatt
     7021 tatctgaact accttcaatt tattcagatg ttagagtttc tatagctgga aatgataact
     7081 atttaaatcc gatacaatcc aacggtctcc aatataaaaa tggatacata ttcttagaat
     7141 tagatccata tcttgtttat gatgttaggg cctatgctgg aaaaactgcc tgcatcgaat
     7201 atgcatccgt aatgtcgggc aacctagcct caagtgatgg aactgagatt ctagagtcaa
     7261 ttagaaataa gtttcaagct gtcgaaattt taaaggaaag tcttaaggag agagaaagag
     7321 aacttgagaa agttcgacag gattatcaga ctattgttac atctcgccga tggattattg
     7381 caacgaaact aattaatttt tttaggagaa aatgatgaaa cgattactat tgtatgtcca
     7441 ttacaataag tatgacaatt taagttctca tgttgtttac caactggaga agatgcgtcc
     7501 cttatttgaa gaagttctat tcatttcaaa tagtaaatta tcaaagttag accaagaacg
     7561 attagaaaca tctggattaa ttactgattt cttacaaaga aaaaatagtg gttttgactt
     7621 tgtcgcatgg aaagatggat ttcaaaagtt aggttttgag catatatcga gctatgattc
     7681 tgtgaccatt atgaacgata cttgctatgg tccaatttgg gatatcaagg aagtttttgg
     7741 tcgctttgaa agtgatttgt ctacagattt ttggggcatg acaaatcatc gtgctacgaa
     7801 acgttttaaa gaacacctcc agagttactt tgtcactttt aaaaagcagg ttgttcaatc
     7861 gtctgagttt aagaaattct ggtcgaatgt acgagaatat tcaattgtac aggatgttat
     7921 tgattattta gaatcgccag taaccaatat ttttgtggat gctggattta actataaggc
     7981 agtctttgat acaacaaccg aagagctaca tcatatgcct ttaccagact tctcatacta
     8041 taatgttgct aagattattg aaaaaagagt accttttatc aaagtaaaag ccttggaagg
     8101 aaatccccag caaacttcat ttgtaatcga tgagttggca aagatttcag gctatcctac
     8161 cgagcttatt gtcgaacata tgtcaaatat gttcactccg gcagcctata acttattaaa
     8221 gtacaagtac ttagataaga atattcaacc tgaatttttg gataagaagg tagcaattca
     8281 cctacatact tattatgttg atcttttgga aagttttcta gatatttttt caacctttag
     8341 ttttgaatat gatttatatt tgacgactga taagggagaa aaagctgatc aaattcgaga
     8401 gattttatca aaaagagaag cgattgcctc tgtccacatc actggaaacc gtggaagaga
     8461 tgttcttcca atgctaaaat tgaaagaaca gctatcgaat tatgatttta tcgggcattt
     8521 tcatacaaaa aaatcacttg aagctgaatt ttgggctgga gaatcatgga gaagagagtt
     8581 gctagaaatg ttagtgaaac catcggacgc gattgtttca caacttgctc agaatgataa
     8641 attaggacta gtaattgctg atattccaac ttatttccgt tatatctctt tggatccatt
     8701 ttatgaaggt gccttatcta cggatatgaa tgtgctatgg gaaagaatgg gaatgaagaa
     8761 agagttggat tttcaggaat tttctaccta tgtcatgagt tatggtacct atgtatggtt
     8821 taggtatgat gccttaaaac cattatttga tatcgatatt caagatgaag aagtgccaga
     8881 agaaccactc ccacttgcaa ccatcctcca ttctattgag cggatgttgg tatatattgc
     8941 ttggggcaat gactatgatt tcctcatttc aaaaaatcca gttaccttgc caccttttgt
     9001 agatgtcact ttattgaata agagagaagg aattcgcttt aaccctgttg caccagttga
     9061 ttttacttat ttcggaggct taacaggtgc cttgaaatat ttcttcttta tcaataagtc
     9121 aattgcaaaa tatgtagtga aacggttatt gaagcgatga tgaacaagtt aaaagattta
     9181 ttagttttga aaaactatga gaattttctc caattgattc cctactctaa atttgcgtat
     9241 tacacctctg ttatagtagc tatttttttg ttaattttta ttggttcgat tataccagtt
     9301 caatcattat tggctagcca agagaccttt tcagctcagt tacctttctg gttggggcta
     9361 tcaggtataa ttattttata ttttgcaagt ttgttttcta gagtattaaa tctaaaaaat
     9421 tttttgcagt ttctacttgc atactttttt atattgatta tatcttatgg tattttttta
     9481 gggataaata ttaataaccc tactattgat atgtgggatt tcagtggaaa tggatttttc
     9541 cagttaaaag ttattagaac aatattctct attcttttat tggcatacgc tgtccgtttt
     9601 agtccaaggt taaacgcatt tattcaaaaa tacataatct gtctgaatga aacattcttg
     9661 atttcaacta tattagttta ttgcatcctc agcaatagtt tgtttattga cttcttcaat
     9721 caacagattg gtaacagtct ttcttttggt atttttgaat tttttaatga ggttaaaaat
     9781 attctattct taccatttat tttggcatgg tgcggatcaa ttgttactta taaagcagtt
     9841 tgtgattttt gggaaaatag gtctagtatt tggacggcaa cttttaccag tgtttttctt
     9901 gcagttatct ttaattttac tcttcaactc ggaatcaaag gagaggaaaa gctattagat
     9961 cgttatatat ttcaaggggc agttagctac cagattctgc ttctatctat tattttttta
    10021 ctgacttatg tagtagtaaa taggtatatt tcttcaactt tcctaattat ttttgttttc
    10081 tctattatct caactgtcaa tgcagttaaa gaaacaatga gaaacgagcc gctattgata
    10141 agtgatttta cttggataac agaactaagt acagttgctg gtttcgttga tggaaatatc
    10201 ataggcaaaa ttatacagta ttctgttcta ttagtatcga taacaatagc gctgcatttt
    10261 actattttaa aaggcaaagt gattgggtat tggaaaaagc gtctagcact agcagtttcg
    10321 ttgctaggaa ttctgggaat gatttttaat atattttcaa atagtgatca aggaaaaata
    10381 aaggaaaata ttcccataat ttccaatttg aataacaagg atgatatagc ttggtttggt
    10441 ttttcgacaa atgctcgcta caagtcgtta atgtatgttt ggacaaagca gttgacgaag
    10501 caaataatga taaaaccaga agcgtacagt aaagaaaaaa tagaagaaat tgttaataaa
    10561 tacagtaaat tggcatctga aattaatcag tcaagaacaa gtaatataga agaacagacg
    10621 ttaatatttg ttcttagtga aagtttttca aatccagcac gtgtcccaaa tgtacaagtt
    10681 tccaaaaatg taatacctaa tattgaagaa ataatgagtc aaactacaag tgggataatg
    10741 aaatcagatg cctatggtgg tggaactgca aatatggaat ttcaatcttt gagtggcttg
    10801 cctttctata atttttcatc ctctgtttct ttggcctata ttgaagttgt tccaaaattg
    10861 aattatttcc cgtctattag taattatttt gctccagagg acagaatagt gattcatcca
    10921 gcaagtgcta aaaattataa tagaaataat atttataagg atctaggttt tagcaagttt
    10981 attgcacaat cagacacgga tttcccaata ggtaatcctg ttgctgtagg tgctttgatt
    11041 ggcgatcaga ctgtctattc aaatgtttta gataacattc aacaagataa aagtcagttc
    11101 ttctctgtca ttacgatgca aaatcattca ccatggattg caagtgagcc atcggaaatc
    11161 cttgcaacag gtgtagggtt tacaacagaa gaaaatgaaa aattgacaag ctattctcga
    11221 ttgcttagtt atacagatga ggcaacaaga gaatttttaa atcgtctatc agagttggat
    11281 aaaaaagtta cattagtatt ttacggtgac catttgccag gcttgtatcc acaagcgaca
    11341 tttaaagaaa aaccagaaag tcagtttcaa acggattatt tcatttggag taataaagat
    11401 acccaaaaat taaactatcc gtatctgaac tctagtgatt ttacagcagc tttatttgaa
    11461 catactaatt ctaaggtctc accttatgtt gcattattga cagaagtatt aaataaagcg
    11521 tccattgata aaatagattt aacagaagaa ggtaaaactg ttgcagatga tttgtattta
    11581 ttacaatatg atataacagt agggaaagga tatattcaag attatttatc tttttttgaa
    11641 attaactagg agagacatat gaaaatcgaa aaaatattct tatatctagc gatatgcatg
    11701 attggtattt ctgttttctt catgccagct acagaagttc cagatgaggt gaaacatgcg
    11761 gatatagcat ggcatatttt gtatccggat tcagatcaca ttatggattg ggaatctaag
    11821 aatgatatta tcaataatcc ccagccagct gatgcagacg taaactggag tctatttcgg
    11881 cagttttttg ttgaaaagat tgatacagaa caaatttcat cacgctttaa ctttgaacta
    11941 aaaagtattt catatcttcc tcaatttatt gggatgtata taggtaagtt aatctatcct
    12001 tccttggggg ttatattgac atttggtcgt ttagtaaatg ctgcagtcta tattattgcg
    12061 attttctact tcattaaatt tattcgttca gggaaagaag ttctattatt tgtttctcta
    12121 ttgccgatga tgattcaaca agcaggttcg ctttcatatg atgtattaaa tcatgttgct
    12181 attgcgggtt tctttacctt cattatcaat cttttggata gaagaacatt tggaataaaa
    12241 catctttttc agcttttggc tatagcaatt ttattggcag ttgtaaaatt aaataatatt
    12301 ttcttattag ccgttcttgc ttttgtcaat tttgaatgta tagatagact gacattgctc
    12361 aatccgtttc tgaagtggtt tcagaaacat cgtctagttg tcctatcact actctctctc
    12421 ttggttgcag tggtagcagg tgtttatatc caccaaaccg ttggggtgaa acaatttgct
    12481 acaatgatgt ttaatacctt gatgaacaat aatttaaatg gagctttgaa tacatttctc
    12541 actacaggta tttttggtta ctttggttgg ttaacaatcc cgttaccatt atgggttgtc
    12601 ttctttgaca tatttgtcct aacactttta ttgtttgtgg ataagagttt tgaactgcct
    12661 aaatcagagg caatcgtgct aggcatggtt tttccagtac aagtagctat tattattgca
    12721 attatgtact tcttatggac gccacaaatt ttgggtgaaa atgcttctat ttcagtagga
    12781 actcaaggaa gatactttac accatttttg ttatatctat atcctctctg t
//
LOCUS       DASFQS010000065        12480 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.067, whole genome shotgun sequence.
ACCESSION   DASFQS010000065 DASFQS010000000
VERSION     DASFQS010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12480
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.067"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(106..672)
                     /locus_tag="U1041_001548"
     CDS             complement(106..672)
                     /locus_tag="U1041_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HEM4768653.1"
                     /translation="MIEAVFKEFIDTDRLVPEKAGLRQLISDIQRENQPLVQELNTSI
                     QTVESTRKLIEQLTLEKIDESVIINPPFQTDFGRHIHFGKDIYINKDVFMVDLGGIFI
                     EDQVLIGPRAKLISVNHPLKAEDRHKLELKSVRIQENAWIGADATILPGVTIGKNAVV
                     AAGAIVTKDVPDNTLVAGAPAKIIKTLA"
     gene            complement(690..1661)
                     /locus_tag="U1041_001549"
     CDS             complement(690..1661)
                     /locus_tag="U1041_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006586335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM4768654.1"
                     /translation="MKSIKMTEEWDKTFPKSDKVEHQKVTFQNHFGITLVADQYKPKQ
                     IQEKLPAIAVAGPFGAVKEQASGLYAQEMAERGFLTIAFDPSYTGESGGSPRYMNSPD
                     INTEDFQAAIDYLSTLDEVDTENIAIIGICGWGGIALNVAALDPRVKVTVASTLYDLS
                     RVTRKGYFDESDTEESRYQMRLALAKQRTEDFKNHNYQLAGGVIDPLPDDAPQFVKDY
                     YAYYKEPRGYHERSLNSNQGWAIQAGTSLLNTHLLDSIGETRNAVLVVHGDKAHNYYM
                     GKDAFEQLTGGNKQMITVEGASHTDLYDQMEIIPFEEIEAFIRQHFA"
     gene            1787..2668
                     /locus_tag="U1041_001550"
     CDS             1787..2668
                     /locus_tag="U1041_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM4768655.1"
                     /translation="MDIRVLTYFIAIVQTGSISNAAQSLHITQPTLSRQIKELEQELD
                     TILFYRGSREIQLTEAGQYLYNRALEITSLVKKTEDTLRPTEMISGDLYIGAAESQSL
                     EPIARAIASLTSQYPNTRVHIQSGNADHILEQLQDGIQDVGITFGRYSTKKFDSLPLV
                     NRDRWGILVPRSHPLASKEELVLSDVLAYPLIVSSQSNVDKSIFAGLGDYRIVATYNL
                     LYNTSLLVKAGVGIALCLDGIVDTSYDGSGLVFRPLDLSTDSLQLLWKKGAVLSPIAK
                     RFIEILEEDLENANLDR"
     gene            2752..3237
                     /gene="tpx"
                     /locus_tag="U1041_001551"
     CDS             2752..3237
                     /gene="tpx"
                     /locus_tag="U1041_001551"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEM4768656.1"
                     /translation="MTTFIGKPVTLVGPQLRVGDTAPDFVLMANDLSLKSLKDFGKQT
                     KVISVVPSIDTGICDTQTRRFNQELADRDNTVVITISADLPFAQKRWCGAAGLEDAIT
                     LSDYYDHAFGKSYGVLMREWNLLARAVFVLNADNEITYVEYLDNVNEHPDYDAALEAV
                     K"
     gene            complement(3307..4188)
                     /locus_tag="U1041_001552"
     CDS             complement(3307..4188)
                     /locus_tag="U1041_001552"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768657.1"
                     /translation="MKLLSLFILRLKRNAIFLSLITAIALIPLALSYRNVLEAENLRF
                     EDRTRIIQVKKEAEIVLYADDKEAQALDQESMDYYKKLLELTTTYLEKEHIQGKSQEV
                     LETELELYQTMQNWEANGHNINHFTNSELAERITVYKKVLEQNLTFHYPTAPKDVYLT
                     LLQVLPASNYMIPLVICCLLVWLLLTDLSKHRGLLFINGLTPSQYATSLTLLALLLQV
                     AIYALILFMLLLLAHQFQFTFQEEYPLLVGTNTQSTISVREQLQKLLLEMAGVTGFYL
                     TFIRLATAKALQTYKRK"
     gene            complement(4201..5061)
                     /locus_tag="U1041_001553"
     CDS             complement(4201..5061)
                     /locus_tag="U1041_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768658.1"
                     /translation="MRLSIHNLCKSYGKKNILDQLNLELVEPGIWALIGPNGAGKTTL
                     LDCIANLQSFDSGEISINGKKHDNTNVYQTFAYLQDNRVLYPELTGLEHLRLVQTIQD
                     LPKERIEEVIQEIGIRDYVNIPVKNYSLGMKQHLLLAIGIMNKPQVMLLDEPLNGLDP
                     TSYIQTRKLLQKLAKNGSTIIVSSHQLNEVDQLTDQLLFLKQGKIIEWKLEQVGRQYA
                     IQTSDNQTVYQKLGQVKGLTLANDSIQVDTSVHSLHFYLDQLMACQVEILDITPQEHQ
                     SEEIYKELFE"
     gene            complement(5064..6281)
                     /locus_tag="U1041_001554"
     CDS             complement(5064..6281)
                     /locus_tag="U1041_001554"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768659.1"
                     /translation="MFQIEGKLFFRSKKTLVAILVMLIAILASSFLAGYHNRQAKLGV
                     IQNYEQYIQKFENIIQDLETQYQNQTLSQEDYQAEKDFFTDYIANYQKEIEAIKKEDW
                     TYFYEKNIQHYQQDGQYISHSYRNYEFTPQTIENTFLISKYLLEKEIPSAFPTELYLT
                     AFESPKTPTDREIVKSLGQQALKGTSHEIWQGQKQLGLVITLPLFLLTFTNFFIKDQQ
                     GTSRQIRLLQTLGLTRIRITTNKYLAFLTLYTALFLTLYLSHLLIAFLLNGNSSWIYP
                     VTTYISKRIDSSLIQTAIKPIYQVILLACGMHYLYLLFLLGVAQTLARVLKNGLAGLV
                     VTLGIAISANFYPHIFNPFSLWNAGNLADGSAIIYQQLTGYSIPKVFTVLLISNLLIY
                     CLQFYLLTRKREV"
     gene            6777..7652
                     /locus_tag="U1041_001555"
     CDS             6777..7652
                     /locus_tag="U1041_001555"
                     /inference="COORDINATES: protein motif:HMM:NF024252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768660.1"
                     /translation="MNSISGSRFKQRRKELGLTQSALAKDICEQSLISRIENTNLSPS
                     SEILFLLSNRLGVTMNYFFEEFVQESRHSIGKIRTIFSQQLLLRNYEIVEQLYVKEVE
                     SRHLLNEEDKAYLDYIFILVQFYSYNERDFATKEFDRLNAIIAPHYYFYLDFLNSYTI
                     FLGEVGEDDKYMELISNVKSEVNKLDLSINADFQAYIKIGYNYARFLLKRKQTNLALD
                     EVTELINQLNAYNSSFLLPDLLCLLGNISKGLLREDEVLDLYEQALVLYKLQGNTKLY
                     LSLKNFLVTMGKEIY"
     gene            7875..8210
                     /locus_tag="U1041_001556"
     CDS             7875..8210
                     /locus_tag="U1041_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase BlpT"
                     /protein_id="HEM4768661.1"
                     /translation="MEKTQIIQDVLALIQDLNRAFQADKVGTADEKRLQHNLTETTRI
                     LSEAESVTNRELIAIEKFYRSTSFLVGLGDLRLSETSRQAWQAFDRYYYQTIREELKL
                     YGGSAIAQV"
     gene            8378..9079
                     /locus_tag="U1041_001557"
     CDS             8378..9079
                     /locus_tag="U1041_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019795669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768662.1"
                     /translation="MSYIQVINSSKYYQMGDATIVANDGVSFEIEKGELVIILGSSGA
                     GKSTLLNILGGMDSNDEGEVWIDGVDIAKLSSHELTNYRRDDVGFVFQFYNLVANLTA
                     KENVELAAEIVKDALNAEEVLEQVGLGHRINNFPAQLSGGEQQRVAIARAVAKKPKIL
                     LCDEPTGALDYQTGKQVLQILQDMSRKQGATVIIVTHNSSLAPIADRVIRMRDARVHS
                     VELNAEPQDIASLEY"
     gene            9079..12456
                     /locus_tag="U1041_001558"
     CDS             9079..12456
                     /locus_tag="U1041_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM4768663.1"
                     /translation="MGETMKKKIYWKDMRQSLLSSKGRFLSIFSLMMLGALALTGLKV
                     TAPNMEKTAQAYIASHRTMDLAVISGLGLSQADLDELETIEGATLEAGYFKDVVTNEG
                     QTAIRLFSAPQNLSTYKVVEGEMPSQKGQIALSASFKNRYKLDDTVQVTESDKDGKIL
                     TQTSFTLVGFVASAEIWDNETMGMAASGDGQLGGYGLVSQDTFKSEVYTIARIRYDDL
                     VDLPYYSQAYQEKLDQHQEDLEKLLADNDEQRLETIQAEGQTEIDKGEAEIGQAQSQL
                     NQATEDLASGQEQVASGRSEFARGRAKLLQSEVELRAVLVQLLQTKFQLDESKKELDN
                     QKDKLDQSKSFLDVSHEGLLETAQRLESAKQQLDSQNAQLSQTASQISTGRASWFQAQ
                     KELDLEIANHLQEGQTLSDYPDLLARQEALDAEKARLDQLEADYEQANQAYLQGYDYY
                     QTKQNEYNSNLAQYQTWNQEYQAGLARYQAGLSQYEQGIVAYNKGVEDYEWGLSQLES
                     SNQLLRQEELRLEEADEELSQAQSQFSEKKATADQEISQAQTEIAQAKSDLSKLEKAP
                     YQVYTRSSLPGGDGYTTYSNATRSIAAVGNVFPVVLYLVAALVTFTTMARFVDEERTQ
                     SGLLKALGYTNRQIMAKFILYGLAAGLVGTIVGIIAGNLLLSPLISNIITQTTVIGPA
                     KLHFYPLWTGLALLLSLASSVLPAYLVARRELTEKPAQLLLPKPPVTGSSIWLEKWPA
                     IWSRLSFTHKVTARNIFRYKLRMLMTIFGVAGTVALLFGGLGIRSSISGVVQRQFGEL
                     IHYDMLVVENSRATEEELDKLTHFLQSDQVRQSLPVAFEQLHQTVEENGQRKNLSISL
                     YISDRRDFGNQVSLESSTGQPIKLSDRGIVLTEKLAQIYGVSVGEKLSLTLEDKEVSV
                     RVEAVADMYAGHFIYMTDSYYEQVTGKQKTANAYLVQLKDSQLGHIQTLASQLLAMPA
                     VRSLVQNTSLIDMLTTIAGSLQTIMTILVILSILLGLVILYNLTIINMSERIRELSTI
                     KVLGFHNKEVTMYIYRETIALSLIGMLVGLVSGIYLHKLLLAMIGSDSIRFNPSVGLE
                     VYLIPILAISGILAALGWYVNHHLRKVDMLEALKSVD"
BASE COUNT         3548 a         2406 c         2852 g         3674 t
ORIGIN      
        1 ttgagaagcg gtacggggct tgagcccagc ctcagactga catcactgct aaaaatccct
       61 acagactgga gaggctatct tctatcagtc tatagggatt ttttcttagg ctaatgtttt
      121 aataatcttt gctggagcgc ctgcaacgag cgtattgtca ggcacgtctt ttgtgacaat
      181 cgcaccagca gccaccaccg cattcttacc aattgtcact ccaggtaaaa tcgtcgcatc
      241 tgcgcctatc caggcatttt cttggatgcg gacagacttg agttcaagct tgtgacgatc
      301 ctccgctttc aagggatggt tgacggaaat cagtttagca cggggaccaa tcaaaacctg
      361 atcttcaata aaaatacctc ccaagtctac cataaagaca tctttgttga tgtagatatc
      421 ctttccgaaa tgaatatgac ggccaaaatc tgtttggaaa gggggattga tgataacgga
      481 ttcgtcaatc ttttccaatg tgagctgttc gatgagcttt cgtgtacttt caactgtttg
      541 aatggaagta ttcaattctt gaacaagagg ctggttttct ctttgaatat cggatatgag
      601 ctggcgtaga ccagcttttt ctggcaccaa ccgatctgta tcaataaact ccttaaaaac
      661 tgcttcaatc atagcaactt ttccttttct tatgcaaagt gttggcggat aaatgcctcg
      721 atttcctcga atggaataat ttccatttga tcatagaggt ctgtatggct tgctccttcg
      781 actgttatca tctgcttgtt gccacctgtc aattgttcaa aagcatcttt gcccatatag
      841 tagttatgcg ccttgtcacc atgaacaaca aggactgcat ttctagtttc tccaatgcta
      901 tctagtagat gagtgtttaa gaggcttgta cctgcttgga tggcccatcc ttgatttgaa
      961 ttgaggctac gttcatggta gcctcgtggt tctttatagt aggcataata atctttgaca
     1021 aattgtggcg catcatctgg tagcgggtca atcacgcccc ctgcaagttg atagttgtga
     1081 tttttgaaat cctcagtccg ttgtttggca agtgctaaac gcatctgata gcgagactcc
     1141 tctgtatcgg attcatcaaa ataacccttt ctagtaacgc gagacaaatc atagagagtg
     1201 gatgctacgg tcaccttgac acgagggtca agggctgcga catttagggc aattcctccc
     1261 caaccacaga ttccgataat agcaatgttt tccgtatcaa cctcatctaa ggtagataga
     1321 tagtcgattg ctgcttgaaa atcttctgta ttgatgtcag gtgagttcat gtagcgtggg
     1381 ctaccaccgg actctcctgt ataagatggg tcgaaagcaa tggttaaaaa gccgcgttca
     1441 gccatttctt gagcatagag accggacgct tgttctttaa ctgctccaaa tggacctgca
     1501 acagcaatgg cgggtaattt ctcttgaatc tgttttggtt tgtactgatc tgccactaag
     1561 gtgataccaa aatgattttg aaaggttact ttttggtgtt caaccttgtc actctttgga
     1621 aatgttttat cccattcttc tgtcattttt attgatttca tgtttcttcc tccatttctt
     1681 gtctcttatc atatcaggga aacaaagata ttacaaatac ctattttata tgttttatat
     1741 gccttataag catggtataa taaagtaaaa aagttggagg tagatgatgg atattcgtgt
     1801 attgacctat tttattgcca ttgtacaaac aggatccata tcaaatgcgg ctcagagctt
     1861 acacattact cagcccacct tatcacggca aataaaagaa ttggagcaag agttagacac
     1921 cattttgttt tatcgtggga gtagagaaat tcagctgaca gaagcagggc aatatctcta
     1981 caatcgcgca ttggaaatta ccagtttggt taaaaaaaca gaagatactc ttcgcccaac
     2041 ggagatgatt tctggtgacc tttacattgg tgcagcagag agtcagtctt tggagcctat
     2101 tgcaagagca atcgcaagct taaccagtca gtatcccaat acgagagtgc acatccaaag
     2161 tggaaatgca gaccatattt tagaacaatt gcaagatggt attcaagatg ttgggattac
     2221 cttcgggcgc tactctacaa aaaaatttga tagtcttcct ttagtaaacc gtgatagatg
     2281 ggggattcta gttcctcgtt cccatccttt agcttctaaa gaagagctag tgctgagcga
     2341 tgttctagcc tatcccttga ttgtttcctc ccaaagcaat gttgataagt ctatctttgc
     2401 tggattaggc gattatcgaa tagtagcgac ttataatctc ctctataata cctctttatt
     2461 ggtgaaagca ggggttggaa ttgctctttg tttggacgga attgttgata caagctatga
     2521 tggaagtgga ctggtctttc gtcctctaga cttgtcaacg gatagcttgc agctactttg
     2581 gaaaaaagga gcggtgttga gcccaatagc caagcgattt attgaaatac ttgaagaaga
     2641 cctagagaat gcaaatttag atagataact tactaaaatt accagtcaaa aaactggtat
     2701 ttttttacat aaacgcttac aatatatata ttaagtgcaa gggagatgtt tatgacaacc
     2761 tttattggaa aaccggtgac cttggtaggt ccgcagttgc gagtgggaga cacggctcct
     2821 gactttgtcc tcatggccaa tgacttgagc ttgaaaagtc tgaaagactt tggcaagcag
     2881 accaaggtca tcagtgttgt gccttctatt gatacaggga tttgtgatac ccagacccgt
     2941 cgcttcaatc aggaactggc tgatcgtgac aatacggttg tcatcaccat ttcagctgac
     3001 ctgccctttg cccagaaacg ctggtgtggc gctgcaggtt tggaggatgc catcaccttg
     3061 tctgattact atgaccatgc ctttggaaaa tcctatggtg tgctcatgcg agagtggaat
     3121 ttgctggcac gtgcggtctt tgtcctcaat gctgacaatg aaatcaccta cgtagagtac
     3181 ctggataatg tcaacgaaca tccagactat gatgcggctt tagaggctgt taaataaaag
     3241 aatatataac ggtgccggaa caggcgtcgt tttttgcatt caaaaagcca ccattttcga
     3301 ggtggcctat tttcgcttgt acgtttgtag ggctttagca gttgctaatc ggataaaggt
     3361 tagatagaaa cctgtcacac cagccatttc cagcaggagt ttctgtaatt gttccctgac
     3421 agatatggta gactgagtat ttgtgccgac tagtagagga tactcttctt ggaaggtaaa
     3481 ttggaactga tgtgccaata gaagtagcat gaacaggatg agagcataga tagcaacttg
     3541 gaggagaaga gcaagtaagg tcaggctagt ggcatattgg ctaggagtta gtccattgat
     3601 aaagagtagg ccacgatgtt tggaaaggtc ggtcagcagg agccagacta agagacagca
     3661 gatgacgaga ggaatcatat agttactagc tggaagaact tgtaacaagg tcagataaac
     3721 atccttggga gcagtaggat agtgaaaggt cagattttgc tctaaaactt ttttatagac
     3781 tgtgatacgt tctgccagtt cgctgtttgt aaaatgattg atattgtgcc cgtttgcctc
     3841 ccagttttgc atggtctggt agagttctaa ctccgtttcc aagacctcct gactttttcc
     3901 ttggatatgt tccttttcta agtaggtggt cgtcagttcc aagagttttt tataataatc
     3961 catgctttcc tggtctaagg cttgagcttc cttatcgtca gcatacaaga caatttcagc
     4021 ttcttttttg acttgtatga tacgggttcg atcctcaaat cgcaggtttt cggcctctag
     4081 aacattccga taggacaggg caagtggaat aagggcgata gcggttatca gggatagaaa
     4141 aatagcattg cgtttcagtc gtaagatgaa aagggacagt agcttcatgg tcagacctcc
     4201 ctattcaaat agttctttat aaatctcttc ggactggtgt tcctgaggtg taatatccaa
     4261 aatttctacc tgacaagcca tgagctggtc tagatagaaa tgcagactgt gaacactcgt
     4321 gtctacctga atgctatcat tggccaaagt cagtcccttc acttgcccaa gtttctgata
     4381 cactgtctga ttgtcactag tctgaatggc atattgtcgc ccaacctgtt ccagtttcca
     4441 ctcaatgatt tttccctgtt taagaaagag cagttggtcg gttagttggt ctacttcgtt
     4501 taattggtgg gaagacacga taatggttga accatttttg gctagtttct ggagcaattt
     4561 tcgggtttga atgtagctgg tcgggtccaa gccgttcaag ggttcatcca agagcatgac
     4621 ctggggcttg ttcattatac cgatagccag caggagatgt tgcttcattc ccagggaata
     4681 atttttgaca gggatattca cataatcacg gataccgatt tcttggatga cttcctcaat
     4741 ccgctctttg ggtaaatctt ggatagtctg gaccaaccgc aagtgttcca gccccgtcaa
     4801 ttcagggtag aggacacggt tgtcctgcag gtaggcaaag gtttggtaga catttgtatt
     4861 atcgtgcttt ttgccattta ttgaaatctc tcccgaatca aaggattgca ggttggcaat
     4921 gcagtctagg agggttgtct ttccagctcc atttggtcca atcaaggccc aaattccagg
     4981 ttccaccagt tctaggttta gctggtctag tatgttcttt ttcccgtagg atttgcacaa
     5041 attgtgaatg gataatcgca tggttagacc tctctttttc ttgtcaggag atagaattgc
     5101 aggcaataga tgagcaggtt actgatgaga agaaccgtaa agactttggg aatactgtat
     5161 cctgttaatt gctggtagat gatagcactt ccatctgcca gattgcctgc attccaaagg
     5221 ctaaatggat tgaagatatg gggatagaag ttggcactga tagctatgcc tagtgtgaca
     5281 accagtccag ccagtccatt ttttaagact ctagccaagg tctgtgccac tcccagcaaa
     5341 aatagaaggt agagatagtg catgccacag gctagcaaga tgacctggta aataggtttg
     5401 atagctgttt ggatcaggct ggaatcaatt ctcttactaa tataggtggt aacgggatag
     5461 atccagctac tattgccatt tagtaaaaaa gcgatgagca aatggctcag atagagggtt
     5521 agaaagaggg cagtatagag tgttaggaag gctaggtatt tattggttgt aattcggatt
     5581 ctagtcagcc ctagggtctg taaaaggcga atctgccggc tagttccctg ctggtctttg
     5641 atgaaaaaat tggtgaaagt taagagaaag agaggaagag tgatgactag gcccagctgt
     5701 ttttgaccct gccagatttc atgactggta ccttttaagg cctgctgccc caggctcttg
     5761 acgatttctc tatctgttgg tgttttggga ctctcaaagg ctgtcaggta aagctcagtt
     5821 ggaaaggctg agggtatctc cttttctagc agatacttgg aaatcaagaa ggtattttcg
     5881 atggtttgcg gggtaaattc atagtttcgg taggaatggc tgatgtattg gccatcctgc
     5941 tgatagtgct ggatattttt ctcataaaaa taggtccagt cctccttctt gatcgcctca
     6001 atctcctttt ggtagttggc gatatagtct gtaaagaagt ccttttcagc ctgataatct
     6061 tcttggctga gagtttgatt ctgatactgt gtttctaaat cttgtatgat attttcaaat
     6121 ttttgaatgt attgttcata gttctggatg acccctaatt tagcttgccg attgtggtag
     6181 cctgctagaa aggaactagc taggattgca atcagcatga ccaagatcgc gaccaaggtt
     6241 ttcttgctac ggaaaaatag ctttccttca atttgaaaca tagatacctc caaaagagaa
     6301 gagattgtag gggaagattt taatttttat ctagagatag ttcctgaata gtaggctaag
     6361 taactaccgt cactgttttt ttgataatcg gttaagcgta aagagccaga gtatcttaca
     6421 ccgtttcgaa attcttcgta gtatttggtt tgagttagat tacgaactac aaaaaaattt
     6481 tctgttaatg taataggaac gagggattgc tgccactctt agagagattt cagcatttac
     6541 agatagagtc gtagttgttg ctagtatcgg gctaatgata gatagtagca aggctgaacg
     6601 caaaacaatc ttttttatgt tgtattctcc attcttttgt ataaaacctc tcatctatat
     6661 actattatat tgatattttt aaatgtagtc aatataaaat gaaaatttta atataaagat
     6721 gatgatattc attttataat agagtataat attcttaaat aaatttggag tatgttatga
     6781 atagtataag tggtagtcgt tttaagcaac gaagaaaaga acttggactg actcagagtg
     6841 ccttagctaa ggatatttgt gagcagagtt tgattagtag aattgaaaat accaaccttt
     6901 ctccctcatc ggaaatcctt tttctactgt ctaataggct gggtgtgacc atgaattatt
     6961 tttttgagga atttgttcaa gaaagtaggc atagtatagg aaaaatacga actattttct
     7021 cccaacaatt gcttctcaga aattatgaaa ttgtagagca attgtatgtg aaagaggtgg
     7081 aaagcaggca cttattgaat gaggaagata aggcttattt agattatatt tttatcttgg
     7141 ttcaatttta ctcatacaat gaaagggatt ttgcgacaaa agagtttgat agactaaatg
     7201 ctattatcgc tcctcattac tatttttatt tagatttttt gaacagttac actatttttc
     7261 taggtgaagt tggtgaagat gacaaatata tggagttaat cagcaatgta aaatcagagg
     7321 tgaataagct tgatttatca atcaatgctg actttcaagc ctatataaag attggttaca
     7381 attatgctag atttcttcta aaacgaaaac agacgaactt agctttagat gaagtgacag
     7441 agctaatcaa ccaattgaat gcctacaaca gtagtttttt attgccagat ttactatgtt
     7501 tgttggggaa tatcagcaaa ggcttattga gagaagatga agttttagat ctgtatgagc
     7561 aggcactagt tttatacaag ttacaaggaa atacaaagtt atatttgtca ttgaagaatt
     7621 ttttagtaac aatgggtaag gaaatatatt gaaaaattag ttatatcaaa aaggaggtat
     7681 ttatgaaacg gataattaca atgatttgtc tgcttctcgc aatcgcaata gtaatcattc
     7741 cccttaaacg aaccgttacg agaacttctg atggatttga tcctggggga attaatatta
     7801 tgaaaaaata aaggacttga atatctttgt cgaatttgat atactaaatt catcaagaac
     7861 aaggagggtc ttttatggaa aagacacaga ttattcaaga cgttttggct ctcattcaag
     7921 acttgaatcg ggcctttcaa gcagataaag taggaacagc tgatgaaaag cgattgcaac
     7981 ataatctgac agagacgaca cgcatattgt cggaggccga gtctgttacc aatagagaac
     8041 tgattgcgat tgagaaattt tatcgttcga ccagttttct agttggactg ggcgacctgc
     8101 gattgagtga aactagcagg caggcttggc aggcctttga tcgctactac taccaaacca
     8161 tcagagaaga actcaaactc tatggtggct ctgccattgc ccaagtataa tagatgataa
     8221 gggagtggga caaaaatcgg taacccgcag ggttcgatga gtcgttagcc cactcaacca
     8281 ctgcgtcaag tttaactatt gaaaaaaact aaggaggcca ggacttttgt cccagcctct
     8341 ttatgttata atattactaa gaaaagcgag gtgtaccatg tcctatatcc aagtaatcaa
     8401 ttcgtcaaaa tactaccaaa tgggggatgc gaccattgta gccaatgacg gtgtgtcctt
     8461 tgagattgaa aagggggagc tggtcatcat tctgggttca tctggtgcgg gcaaatccac
     8521 tctgctcaat atcttaggcg gcatggatag caatgatgag ggggaggttt ggattgacgg
     8581 tgtggatatt gccaagcttt ccagtcatga actgaccaat tatcgtagag atgatgtagg
     8641 ctttgtcttt caattttata acttggttgc caatctgacc gctaaggaaa atgtggaact
     8701 ggctgcagaa atcgtcaagg atgccttgaa tgccgaggaa gtcttggaac aggtcggact
     8761 tggccatcga attaataatt tcccggctca gctttcaggc ggtgaacaac aacgtgtggc
     8821 cattgcccgt gctgttgcca aaaagcctaa aattttactt tgcgatgaac cgacaggtgc
     8881 cctggactac caaacaggta agcaggtctt gcaaatccta caagatatgt cccgcaagca
     8941 aggagctacg gtgattatcg ttacccataa tagctctttg gcacctattg cagatagagt
     9001 cattcgaatg cgggacgccc gtgtgcattc tgtcgagctg aacgcagaac cacaggatat
     9061 tgcaagctta gaatattagt gggtgaaact atgaaaaaga aaatctactg gaaggatatg
     9121 aggcaatctc tgctttcttc caagggacgt tttttatcca tttttagcct gatgatgcta
     9181 ggagctctag ctttgacagg tctgaaagta acagctccca atatggaaaa gacggcccaa
     9241 gcctatatag ccagtcatcg aacgatggat ttggcggtaa tttcaggtct gggacttagt
     9301 caagctgacc ttgacgaatt agaaacgata gaaggtgcta ctcttgaagc gggctacttt
     9361 aaagatgtgg ttactaatga aggccagact gcaattcggc tgttttcagc tccccagaac
     9421 ctatcgacct ataaggtagt agaaggggaa atgcccagtc aaaaggggca aatagcccta
     9481 tcagcttctt tcaaaaatcg gtacaaattg gacgatactg ttcaagtgac ggagtctgat
     9541 aaggatggaa aaatcttgac acagacgagt tttactcttg tgggctttgt cgcatcagca
     9601 gaaatttggg acaatgaaac catgggcatg gctgcaagtg gtgatgggca gttaggtggc
     9661 tatggccttg ttagtcagga taccttcaaa tcagaagttt acactattgc ccgtattcgc
     9721 tatgatgatt tggttgattt accatattac agtcaggcct atcaagagaa actggaccaa
     9781 caccaagaag acctcgaaaa gttattagca gataatgatg aacagcggtt ggaaaccatt
     9841 caagcagaag ggcaaacgga aattgataag ggagaagcag agataggcca agctcaatct
     9901 cagctgaatc aagcgacaga ggatttggcc tctgggcagg aacaagtcgc aagcggtcgc
     9961 agtgaatttg cacgtggacg ggctaaactc ttacaatcag aggtagaatt acgagccgtc
    10021 cttgtccaat tgttgcaaac caagtttcaa ttggatgaaa gtaaaaaaga gttggacaac
    10081 cagaaggata aactagacca aagcaaatct tttttggatg taagtcacga gggactactt
    10141 gaaactgctc aacgcttgga aagtgccaaa cagcaactgg attcccaaaa tgcccaactg
    10201 agtcagaccg catctcagat ttccacaggg cgagctagtt ggtttcaagc tcagaaagag
    10261 ttagaccttg aaattgccaa tcacttgcaa gaaggtcaaa ccctctcaga ctatcctgac
    10321 ttattggcta gacaggaagc cttggacgca gaaaaagctc gcttagatca acttgaagct
    10381 gactatgagc aggccaacca agcctattta caaggttatg attactatca aaccaaacaa
    10441 aatgaataca atagcaatct agcccagtac caaacttgga atcaagaata tcaggcaggt
    10501 ttggctcgtt atcaagcagg tttgagtcag tatgaacaag gcattgtagc ctacaataaa
    10561 ggagtagaag actatgaatg gggactgagt cagttagagt cttcaaatca actgctccgt
    10621 caggaagaac tccgtttgga ggaggctgat gaagagttaa gtcaagctca atcccaattt
    10681 tctgagaaga aagccacggc cgatcaagaa attagccaag ctcaaactga gattgctcag
    10741 gctaaatccg acttaagtaa gctggaaaaa gcgccctatc aggtctatac tcgatcaagc
    10801 ctaccaggtg gggatggcta cactacctat agcaatgcga ctaggtctat tgcagcagtg
    10861 ggcaatgtct tcccagttgt tctctacctt gtcgcagctc tagtgacttt taccaccatg
    10921 gcccgttttg tcgatgaaga gcgaacacag tcaggtctcc tcaaggccct tggctatacg
    10981 aatagacaga ttatggctaa gttcattctc tatggtttgg cggcaggtct ggtaggaaca
    11041 atagtcggta taatcgcagg taatctcctc ttgtctccac ttatttctaa cattattacg
    11101 cagacaaccg tgattggacc agctaaactt catttttatc ccctttggac aggtttagcc
    11161 ttgctcctgt ctttggcttc ctcggtcctg ccagcttact tggtggctcg tcgggagctg
    11221 acagaaaaac ctgctcagct acttttacct aagccacctg ttacaggctc cagtatttgg
    11281 ctagaaaaat ggccagctat ctggtctcgc ctgagcttca cccataaggt gacagcccgc
    11341 aatatcttcc gttacaagct tcgtatgctt atgaccatct ttggagtagc agggaccgtc
    11401 gcccttcttt ttggaggact gggtatccgt tcctctattt caggagttgt ccaacgacag
    11461 tttggggagc tgatccatta tgatatgttg gtggtggaaa atagcagagc tactgaggaa
    11521 gagttggata agttaacaca ttttcttcag tcagatcagg ttcgccaatc cttgccagtg
    11581 gcttttgaac agctccatca aacggtggaa gaaaacggtc agagaaagaa tttatcgatt
    11641 agtctctaca tttcagaccg tcgggatttt ggaaatcaag tcagtctgga aagttcgaca
    11701 ggtcagccta ttaaactgag tgacaggggg attgttctca cagaaaaatt ggcgcaaatc
    11761 tacggggtct ctgttggtga gaagttatca ctgaccttgg aagataagga agtttcagtc
    11821 agagtagagg ctgtagctga tatgtacgca gggcatttta tctatatgac agatagctac
    11881 tacgaacaag tgactggcaa gcagaagact gccaatgcct atctggttca gttgaaagac
    11941 agtcagttgg ggcatattca gactcttgca agtcaactcc tagcgatgcc agcagtcaga
    12001 agtttggttc aaaatacttc tcttatagac atgcttacca cgattgcggg ctcgcttcag
    12061 accatcatga ccattctagt cattctatcc atcttgcttg gcttggttat tctttacaac
    12121 cttacaatta tcaatatgtc cgaacggatt cgtgagttat ccaccatcaa ggtactgggc
    12181 ttccacaata aagaggtgac catgtatatc tatcgtgaaa ccattgccct ttcgctgatt
    12241 ggtatgttgg ttggactggt tagcggtatt tatctccaca agctccttct tgccatgatt
    12301 ggttcggaca gtatccgctt taatccatct gtcggactag aagtctatct cattcctatc
    12361 ttagccatta gtggaatttt ggccgctctt ggttggtacg tcaatcacca tctgagaaag
    12421 gtggatatgc tggaggcctt gaagtcagtt gattagggag tgggaaagaa ctcgagtggt
//
LOCUS       DASFQS010000066        12164 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.068, whole genome shotgun sequence.
ACCESSION   DASFQS010000066 DASFQS010000000
VERSION     DASFQS010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12164
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.068"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(6..1451)
                     /locus_tag="U1041_001559"
     CDS             complement(6..1451)
                     /locus_tag="U1041_001559"
                     /EC_number="6.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019792455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-
                     lysine ligase"
                     /protein_id="HEM4768664.1"
                     /translation="MIKIEQVLDILKADDNFRHIKQNNQTVSTWTDVQFDALSYDSRT
                     VSPRTLFFAKGLAFKKEFLEKAIEDGLTFYVSEIDYEVGIPAIIVHDIKQAMSLIAMD
                     FHGHPQKQLKLLAFTGTKGKTTAAYFAFNILKQSHKPAMLSTMNTTLDGKTFFKSTLT
                     TPESLDLFAMMAEAVQNGMTHLIMEVSSQAYLVKRVYGLTFDVGVFLNISPDHIGPIE
                     HPTFEDYFYHKRLLMDNSRAVIVNAGMDHFEVVKDQVSSKDHDFYGPTSENQISQSAG
                     FDFTVTGKLAGHYDIQLIGGFNQENAIAAGLACLRLGASLEDIHTGIAQTNVPGRMEV
                     LTQQNGAKVFVDYAHNGDSVKKLIDVVLEHQTGKVFLILGAPGNKGESRRKDFGLLLN
                     DYPQVEVILTADDPNREDPATIAEQIRAHMTRPSDFILDREEAIRTAMSQTSSPKDAV
                     IIAGKGADAYQIVNGEKTAYDGDLEVAKQYL"
     gene            1596..2342
                     /locus_tag="U1041_001560"
     CDS             1596..2342
                     /locus_tag="U1041_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEM4768665.1"
                     /translation="MFYSYLRTLLTFLLWAINGNIHYHDREKILPQEENYILIAPHKT
                     FWDPVFLGYAAAPKQFIFMAKKELFKDRGFGWWISKCGAFPIDRENPGMAAIKYPVNM
                     LKKSDRSLVMFPSGSRHSSELKGGVAVIAKSAKVKLMPATYVGPMTIKGLLAGERIDV
                     AFGNPIDVSDIKRMDDAGIAEVTSRIEAEFKRLDDHAASFQTKKKPNILTYIYRIPVL
                     LLVALILGLTYVFSYIASFFWQPSTQLDKK"
     gene            2409..3071
                     /locus_tag="U1041_001561"
     CDS             2409..3071
                     /locus_tag="U1041_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEM4768666.1"
                     /translation="MDKIKTYIEMLKEYKWQIALPAVAGLLMAMFLIFSQSAKSDQTG
                     LTDFPQTEQTSSSSDLVEETSTEASEEPTQLVVDVKGAVAKPGLYTLEADARVNDAVE
                     AAGGLTSQADPKSINLAQKLSDEAVVYVASKDEDISVVASTTASSAMSQEEKNTSLVN
                     LNTATEADLQTISGIGSKRAADIIAYREANGGFKSVDDLNNVSGIGDKTMESIRPYVT
                     VE"
     gene            3055..4728
                     /locus_tag="U1041_001562"
                     /pseudo
     CDS             3055..4728
                     /locus_tag="U1041_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636902.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
     gene            4838..5494
                     /locus_tag="U1041_001563"
     CDS             4838..5494
                     /locus_tag="U1041_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001842569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpXC domain-containing protein"
                     /protein_id="HEM4768667.1"
                     /translation="MMKRKSRMTTIFLTKTNCTNCGKQSTFERFDRVYAVKTPEIVSA
                     ILDWDFFKFTCHNCNHMILIDYPTVVVDEEQKTIIQYCADGNVDVLSMQICSLISEGI
                     NLSEYRIRVVSDIESFVEKVQIVSAGYDDRAIELMKYMNSPLEDGDIQFNYEHMIFTK
                     VGHESYQFMFINNQIAVASLDFCQEQYEYYLADVKDLETNSYYIDSRWAESFTRTSLA
                     "
     gene            5623..6735
                     /locus_tag="U1041_001564"
     CDS             5623..6735
                     /locus_tag="U1041_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001842570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4768668.1"
                     /translation="MVRRNSKITRQQKKIRDAFVSERTVEIIPAKREFTDVKTKKLRV
                     AAYCRVSTFDESQSGSFELQKQTYTERINSNPDWIMAGIYADQGASGTSIKRREQFQQ
                     MLHDCRCGKIDLIIVKSVSRFARNQLDFISIYRELKALSPPVGIYIEDINLNTLDTNS
                     EFILGIMAIVAQGESEQKSASITWSVIERFKRGIPMIPTHNLLGYTKDQYGRVVIDET
                     EAKIVRLIYDSYIEGMTASEIASTLMTNHIPTVTGLERWTSLAVYNILRNEKYKGEII
                     MQKTYTVDCFSHKTRKNNGEKPKYRLKNGIPSIIPESRWDLVQELLKQPRRKSKSTSE
                     IFVPKLYIKKLKSGKLRDFVVLDPSWKSEDIHEVFK"
     gene            6750..7166
                     /locus_tag="U1041_001565"
     CDS             6750..7166
                     /locus_tag="U1041_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768669.1"
                     /translation="MRFKDFNLEVVNVERYSSDYSMTVNKNFVTFSKGIVQALEYPAH
                     VLVAFNKDTKVMGIQVCRAKTRGAFSFSKPVGEQKGIVQVGHKNLKETLLTIMSEWKS
                     DKRYRVEGIHIPEDKAFVFELKDFEELSDFRKNDNK"
     gene            complement(7614..8363)
                     /locus_tag="U1041_001566"
     CDS             complement(7614..8363)
                     /locus_tag="U1041_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM4768670.1"
                     /translation="MAINKHLTETEKHTWTHLNNKFKEISTLSISEASELLNVSTATI
                     TRTLQKKGYTGFSDFKHDVKDRKQDSLSILKDKKITDEIKVSVLKSYQEVTKTLNDLD
                     LETLEMAISELQSAKKITIFARGFSELLATEMQTKFLLLGYYTELHTDPNIIRTVSAR
                     LDANDCVVFISLNGETIELQDAAKICQQNDTTTILLSANPSGSLSNYTQIKLFGFKTE
                     LTYFPDVEVHSRLPLYIIGRLLLDTLAANQK"
     gene            8646..9581
                     /gene="pfkB"
                     /locus_tag="U1041_001567"
     CDS             8646..9581
                     /gene="pfkB"
                     /locus_tag="U1041_001567"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HEM4768671.1"
                     /translation="MGIYTLTMNPAIDMFIKTNQLKNNIVNRTLYDELQPNGKGVNVS
                     FILKMLDIPNTAFGFSAGFTGQFIKDELLAKGITEEFIDVEGITRINVFTQVLETSEE
                     YKLVNKGPEISPSAQDTLLEKIRLLGSDDYLVISGSLPRGIDSSYLVKIAEITDENKV
                     SLILDISDPVILTCLKYKPYLIKPNDEEIAQWFGVTEISEDAILVYGKTLQDKGARNV
                     LISLGGKGAVMFTDSGEIFTCNAPKGEVVNTACAGDTTLGTFLGSKILGLSTEKSLIK
                     AVAAGSSTAFRSGLTDFSDVDELSKQILLKKMEVK"
     gene            9582..10970
                     /locus_tag="U1041_001568"
     CDS             9582..10970
                     /locus_tag="U1041_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HEM4768672.1"
                     /translation="MATYKLIAATGCPTGIAHTFMAQEALEQAAKERNVSIKVETHGQ
                     IGIENELTAEEIAAADAVIIAADKDVNAERFAGKRVIETSVGEGIKNASKLIDDALSG
                     KGVVKAGEAIKQESSSAGNESFGRQIYKHLMNGVSHMLPFVVAGGVLIAISFLFGIFS
                     FDPNSEQYNPFAAMLKNDIGGVAMGMMVPVLSAYIAESIAKRPGFVSGLVAGLMAANG
                     GSGFLGGIVGGFAAGYIVLALMKLFKGLPKSLDGLKAIFLYPLFGVFVTGLFMVAVNS
                     PMTWVNESMMAWLAGFENANPIILGIIIGCMSAFDMGGPVNKAAYVTGTALLAQGNTS
                     FMAGVSAACIVPPLTTFVATTVFRKYYSDEDCNAGLANLILGSTHITEGAIPFAAKDP
                     LRNLPTLMLGSSIGAVLTYLWGVKVPAPHGGFLVLPVVTNAGLWVLAIAIGAIISGLL
                     LGYIQKTKIEKV"
     gene            10982..11425
                     /locus_tag="U1041_001569"
     CDS             10982..11425
                     /locus_tag="U1041_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4768673.1"
                     /translation="MIDKKLVQVDVSASSKESVFDCLSQLVFEHGYATDIALVKEALL
                     AREDEGTTGMMDGFAIPHAKSSAITKPGVAVLKLANGVEWQSMDGQPITSVIALFIPE
                     TEAGTTHLKFLSKIARLLMKTEFKISFTNANSVDEIVELLKKHLV"
     gene            11491..>12164
                     /locus_tag="U1041_001570"
     CDS             11491..>12164
                     /locus_tag="U1041_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose 1,6-diphosphate aldolase"
                     /protein_id="HEM4768674.1"
                     /translation="MVKNLSKLMTKNGIISALAFDQRGALKKMIAKHQTETPTVEQME
                     KLKTLVSEELTQFSSSILLDPEFGLPASHARDEQCGLLLAYEKTGYDTSSTNRLPDCL
                     VEWSVKRLKEVGADAIKFLLYYDVDGDPYVNLQKHAYIERLGSECQAEGLPFFLEILS
                     YDETIEDNASVEFAKAKPRKVNEAMRVFSDERFGVDVLKVEVPVNMNFVEGFGTGEVV
                     YTKEEAA"
BASE COUNT         3553 a         2143 c         2695 g         3773 t
ORIGIN      
        1 gtatgttaca aatattgttt tgctacttcc aaatcaccgt cataggcggt cttttcgccg
       61 tttacaatct ggtaggcgtc agcccctttg cctgcgatga tgacggcatc tttcggagag
      121 cttgtctgac tcatggctgt gcgaatggct tcttcccggt ccaagataaa gtcacttgga
      181 cgggtcatgt gggcacggat ttgttcagca atagtagctg gatcttcacg gttggggtca
      241 tcagctgtca gaatcacctc aacctgcgga tagtcattga gcagaagacc gaagtctttg
      301 cggcgacttt ctcccttgtt accaggagct cccaaaatca aaaacacctt gccagtctgg
      361 tgctctaaga cgacatcaat cagcttcttg acactatcgc cgttatgggc atagtccacg
      421 aagaccttgg ctccgttttg ctgggtcagg acttccatac gaccagggac attggtttgg
      481 gcaatccctg tgtgaatatc ttccagactt gctcccaaac ggagacaggc cagtcctgct
      541 gcgatggcat tttcttggtt gaagccaccg atcagctgga tgtcgtaatg gccagctaat
      601 ttgccggtca ctgtgaagtc aaaacctgct gactgactaa tctggttttc agaagtcggt
      661 ccatagaagt catggtcctt tgagctgact tggtctttta cgacctcaaa atggtccatt
      721 ccagcattga caataaccgc tctgctattg tccatcaaaa gccgcttgtg gtagaaatag
      781 tcctcaaaag tcgggtgctc aatggggccg atgtggtcag ggctgatgtt gaggaagacg
      841 ccgacgtcaa aggtcagccc gtaaactcgc ttgaccaagt aagcctggct ggacacctcc
      901 ataatcaagt gggtcatgcc gttttggacc gcctccgcca tcatggcaaa gaggtccagg
      961 ctttcaggcg tggtcaaggt ggacttgaag aaggttttgc cgtccagcgt ggtgttcatg
     1021 gtcgaaagca tggcaggttt gtggctctgt ttaaggatgt taaaagcaaa ataagccgcc
     1081 gttgtcttac ctttggtacc ggtgaaggcc aggagtttga gctgtttctg gggatgaccg
     1141 tgaaaatcca tggcaatcag gctcatggcc tgcttgatat catggacgat gatagcagga
     1201 atgccgacct catagtcgat ttcagacacg taaaaagtga gcccatcctc aatagccttt
     1261 tccagaaatt ccttcttaaa ggccaaaccc ttggcaaaaa agagggtcct tgggctaaca
     1321 gtccggctgt catagctgag agcgtcaaac tggacatccg tccaagtact aacagtctgg
     1381 ttattttgtt tgatatggcg gaagttgtca tccgctttta agatgtctaa tacttgttca
     1441 attttaatca tgcttctatt gtaaacctat ctagtggttt ttacaagtcg ggactttgta
     1501 aataaaagct ttttgattgt taaaatgatt acatgtgaca tttcttcctg aagcaatttt
     1561 gtgctataat aggagagatt gaaaaggaga agtttatgtt ttattcttat ctacgaacac
     1621 tattaacatt cttgttgtgg gccattaatg gcaatattca ctatcatgat agagagaaga
     1681 ttttgccaca ggaggaaaat tatattctta tcgctccgca caaaaccttc tgggatccag
     1741 tctttcttgg ctacgctgct gctcccaagc agttcatctt tatggcaaaa aaagaacttt
     1801 tcaaggaccg tgggtttggc tggtggattt caaaatgtgg agcctttccg attgaccgtg
     1861 aaaatcctgg tatggcagcc atcaagtatc cagttaacat gttgaaaaaa agcgaccgtt
     1921 cgctggtcat gtttccttct ggaagtcgtc attcatctga gctcaaaggt ggtgtggcgg
     1981 tcattgccaa gtcagccaag gtcaaactca tgccagctac ctatgtggga ccaatgacta
     2041 tcaaggggct cttagctggt gagcgaatcg atgtggcttt tggaaatcct atcgatgttt
     2101 cagacatcaa gcgtatggat gatgcaggta tagcagaagt aactagccga atcgaggcgg
     2161 agttcaaacg cttagatgac catgcagctt ctttccaaac caagaaaaag ccaaatatct
     2221 tgacttatat ctatcgtatc ccagttcttt tgctggttgc ccttatcttg ggtctgacct
     2281 atgtctttag ctatatcgcc agctttttct ggcaaccaag tactcagttg gataaaaaat
     2341 aagtaaatga aactcgcagc ttgcgggttt tttgtatttt ttacgaacta tataggtgga
     2401 ggtaatttat ggataagatt aaaacttata tagaaatgct taaagaatac aagtggcaaa
     2461 ttgctctgcc cgcagtggct ggcttgctaa tggcgatgtt cttaatattc agccaatcag
     2521 ctaagtctga tcagacaggc ctgacagatt ttccacagac cgaacaaact tctagcagct
     2581 ctgacttggt cgaggaaacc agtacagaag caagtgaaga gcctacccag ctggtcgttg
     2641 atgtcaaagg agcagtagca aagccgggac tctacacttt agaagctgat gcgcgtgtca
     2701 atgatgcagt tgaagcagct ggtggcttga ccagtcaggc agaccccaag tctatcaatc
     2761 tggctcagaa gctcagcgac gaagcggtgg tctatgtggc aagcaaggat gaagatatct
     2821 cggtggtggc cagcacgacg gccagctctg ctatgtccca agaagaaaaa aacaccagtc
     2881 tagtcaatct caacacggcg actgaggcgg acctacagac tatttcgggc atcggttcca
     2941 agcgagcggc ggacattatc gcctatcgtg aggccaatgg cggcttcaaa tcggtggacg
     3001 accttaacaa tgtttcaggc atcggcgaca agaccatgga aagcatccgg ccttatgtca
     3061 cggttgagta agctccccta ccagcccatc cacctggcag ttttggcggt ggcgacctac
     3121 tttgcagttc actctttctc cctcttgaca atgggcctgt tgagtttctt actagttgtc
     3181 tttgggtttc ggcaaggtaa ggcagttttt ctcaaaacgc tgctgcttct agccctgtgc
     3241 ggtctgtttt tcggctacca aaaggtccaa tgggagcggg cagatcagtc agccccagag
     3301 caagtgacga ctgtgcagat tattccagat acgattgaag taaacgggga cagcttgtct
     3361 tttcgtggtc gggctgacgg acaaacctat caggttttct acaaattagc tagtcaggag
     3421 gagcaggctt attttcaaaa gttgacaggt ctggttcagc tagaagtgga agcagaggtc
     3481 agcctgccag ctggtcagcg gaatttcaag ggctttgact atcaggtcta tctgaaaaca
     3541 cagggcatct atcggacagt caagctaacg gcgattaaga agattgtccc tgtccagtct
     3601 tggaatgttt ttgactggct atcaagctgg cggaggcagg ctttggttta tatcaaaacc
     3661 aattttccgg ctcccatgag tcactacatg acagggcttt tgtttgggga gctggatagt
     3721 gagtttgacc agatgagtga cctctattcc agtctgggta tcattcatct ctttgccctg
     3781 tctggtatgc aggtgggctt tttcatcgac aagtttcgtt ggattttgtt gcgtctgggc
     3841 ttgaccaagg aagctgtaga taagttgcag attccctttt cactttttta tgctggtttg
     3901 acaggttttt ccgtgtcggt ggtacggtcc ttggtccaaa aaattctggg taatctgggc
     3961 ttgcggaagc tggataattt tgcggtgaca gtctttgtct gtctgctgat tctgccccga
     4021 tttttgctga cagcaggagg tatcttgacc tttacctatg cttttttgct gacggtcttt
     4081 gattttgagg acttggggca ggtcaaaaag gctgcggtgg agagtctcag tatttcactt
     4141 ggaattttgc cagtactcat gacctatttc tatgcctttc agcctttgtc tatcctctta
     4201 acttttgtct tttccttggt ctttgatgtc ctgcttttgc caggtttatc ggtcattttt
     4261 cttctatcgc ccttggtcaa gatgacttgg gtcaacggat ttttcgtttt tatggaaaaa
     4321 atcattgtct gggtggcgga tttgggtttt cggccttgga tactgggcaa gccgtctgag
     4381 ctggtcctct tgcttttgct ggtcagcctc ttcttgctct acgatttcca caggagaaag
     4441 aaatggcttc taggactgag tctggtcctc gctctgctat ttttcatcac caaacacccg
     4501 ctggaaaacg aggtgacggt ggtggacatc gggcaggggg acagcatctt tttgcgggat
     4561 atgcgggggc ggacggttct gattgatgtg ggcggacgag tcgatttcgc ggccaaggaa
     4621 gcgtggcagg agcgatctcg gcaggcaaat gcagagcgga ctttgattcc ctatctgcat
     4681 agtcggggtg tggataggat tgatagtcta gtgctgaccc acaccgaagt gtgagttctg
     4741 aaattgatac aatacaattt aacttttttt gaaaaaaatt ccaaaattta ttttgacttg
     4801 cgaatataat aagtgagagc aagttgctta cttattaatg atgaagagga aaagtagaat
     4861 gacaacaatt tttttaacaa aaacaaactg cactaattgc ggaaaacaaa gtacttttga
     4921 aagatttgat agggtttatg cggtgaagac ccctgagatt gtttctgcta ttttggactg
     4981 ggatttcttt aaatttacct gccataactg taaccatatg atactaattg attacccaac
     5041 agtcgtagta gatgaagaac aaaaaacaat tattcagtat tgtgcagatg gtaatgttga
     5101 tgtgctttca atgcaaatat gctctttgat ttctgagggt atcaatctca gtgagtatag
     5161 aattcgagta gtttcggata tagagtcttt cgttgagaag gttcagattg tttcagcagg
     5221 gtatgatgat agagcaattg agcttatgaa gtatatgaat agtcctcttg aggatggtga
     5281 tattcagttt aactatgaac atatgatttt caccaaggtt ggacatgaaa gctatcaatt
     5341 tatgtttatt aataaccaga ttgcagtagc atctctcgac ttttgtcaag aacaatatga
     5401 gtactacctt gctgatgtta aggaccttga aactaattca tattacatag actctagatg
     5461 ggcggaatca tttactcgta ccagtttggc ataaaattca aaatttattt actaatatca
     5521 atgacctaat cattagttag gtcttttttt atcttctaat ttagaaaaac gtagttaata
     5581 tatataatta ttatgtagat ttctagaaag gaggtaaaac caatggtaag acggaattct
     5641 aaaattaccc gtcaacagaa gaaaattcga gatgcatttg tatctgagag aactgttgaa
     5701 attattcctg caaagcgaga gttcactgat gttaaaacta agaagttacg tgttgctgcc
     5761 tattgtcgag taagtacttt tgacgaatct cagtcaggta gttttgaact tcaaaaacaa
     5821 acctatactg aaagaatcaa tagtaatcct gattggataa tggctggaat ctatgctgac
     5881 caaggagcat caggaacatc aatcaaacga cgtgaacaat tccaacagat gcttcatgat
     5941 tgtagatgtg ggaagattga cttgataatc gttaagagtg ttagcaggtt tgctcgcaat
     6001 cagctagatt tcattagtat ttaccgagag ttgaaggcac tatcccctcc agttggaata
     6061 tatatcgaag atataaattt gaatacactt gatacgaata gtgaattcat tcttggtatt
     6121 atggccatag tagctcaagg tgagagtgaa caaaaaagtg cttcaattac atggtctgta
     6181 attgaacgct ttaaaagagg gataccaatg attcctaccc ataaccttct tgggtatacg
     6241 aaagaccagt atggtcgagt tgtgatagat gagactgaag caaaaattgt tcgcctaata
     6301 tatgattcgt acattgaagg tatgactgca agtgagattg cctcaacttt aatgactaat
     6361 catataccaa cagttactgg tttggagcgt tggacaagtt tagctgttta taatattctc
     6421 aggaacgaga aatataaagg cgaaatcatc atgcagaaga catatactgt tgattgtttt
     6481 agtcataaaa cacggaaaaa taatggtgaa aagccaaaat atcgattaaa aaatggaatt
     6541 ccctcaatca taccagaatc aagatgggat ttagtacaag aattactcaa gcaacctaga
     6601 agaaaatcga aatctacttc tgagatattt gtacctaaac tttacatcaa gaaactcaaa
     6661 tctggtaagt tgagggattt tgttgtactt gatcctagtt ggaagtcgga agacattcac
     6721 gaagttttta aataagaaag aggtaaatta tgcgttttaa agattttaat cttgaagttg
     6781 ttaatgttga acgttactca tcagattata gtatgacagt gaacaagaac tttgttacat
     6841 ttagtaaagg gattgtccaa gctttagaat acccagcaca tgtacttgtt gcttttaata
     6901 aggatacaaa ggtaatgggt atacaagttt gtcgggcaaa aactcgggga gcattttctt
     6961 tttcaaaacc tgttggggag caaaaaggta ttgttcaggt aggtcataaa aatttaaaag
     7021 aaacactctt aacaatcatg agtgaatgga aatctgataa gcgttatagg gtagagggga
     7081 ttcatattcc tgaagataag gcttttgttt ttgaattgaa agattttgag gaattatctg
     7141 attttcgtaa aaacgacaat aaatagtacg gaattaagat aaaaattatt ggtgggagta
     7201 caactattgt attcctgcca ttttcatatt tttgcaaggg gtttcatgtt ataatatatt
     7261 gtaggaggta actctatgaa caataaagaa ttatattgca ggccatgttt ttcgtattaa
     7321 ttcatgctta aatcaagttt atgatactgt ttgcaaattg ttttatctat tctttttgta
     7381 gtagcatctc tcgacttttc tcaagaacaa tatgagtact actttgcaga tgttcgagac
     7441 ctagaaacta atacatatta catagattct agatgggcgg aatcactctg tcgtaccagt
     7501 ttggcataaa acctttttat aatttacatg aaaatgacct gattgttagt caggtcattt
     7561 ttcatttaca gattgcaaaa atggtagttt taatattttg tttagctaga ggtctatttt
     7621 tgattagcag ctaaagtatc taataataaa cgtccaataa tgtaaagtgg aagtcgagaa
     7681 tgtacttcta catctgggaa gtatgttaac tctgttttaa atccaaaaag cttaatctga
     7741 gtataatttg ataggctacc tgaagggtta gcacttagaa gtatagtagt ggtatcgttt
     7801 tgttgacaaa tttttgcagc atcttgtaat tcaatcgttt ctccatttaa ggatataaat
     7861 accacacaat catttgcatc caatctggca cttacagtac ggataatgtt tgggtctgta
     7921 tgaagttctg tataatatcc cagtaagaga aattttgttt gcatctctgt agcaagtaat
     7981 tcagaaaatc ctctagcaaa aatagtaatt ttctttgcac tttgtagttc tgagattgcc
     8041 atttctaatg tttctaggtc aagatcatta agtgtttttg taacttcctg ataactcttt
     8101 agtacagaaa ctttgatttc gtcggtaatt tttttatctt tgaggatgga taagctatcc
     8161 tgttttctgt cttttacatc gtgcttaaaa tcagaaaatc cagtataacc ttttttttgt
     8221 agtgttctag taatagttgc agttgaaaca tttaataatt cactagcttc cgaaatgcta
     8281 agagtcgaaa tctctttaaa tttgttatta agatgtgtcc aagtgtgttt ttcagtttca
     8341 gtcaaatgtt tattaattgc cataataatt ccttatgctt tatgaatttt tagtgttata
     8401 aagggaagag tattttaaaa tgtaatcatc attaaagaaa ctgcaacaca caaaattaga
     8461 tgatgtagct atcttaactg ataatttatg ctcattatta tctatgattt tcagtttgcc
     8521 ttttttgaat tttcggatgg cctgtagagt aaaatgttac aaaaacatta gaatattaga
     8581 aaacacttac attataaaaa tgttattatt attataacaa aaaaagaatg aaaggagaat
     8641 aaggtgtggg tatctatact ttaacaatga atccggctat cgatatgttt atcaaaacaa
     8701 accagctaaa aaataacatc gttaatcgaa ctttatacga tgaactgcaa ccaaacggaa
     8761 aaggtgttaa tgtctcgttt atactaaaga tgctagatat tccaaataca gcatttgggt
     8821 ttagtgctgg ttttacggga cagttcataa aggatgagtt actagctaaa gggattaccg
     8881 aagagtttat tgacgttgaa ggaataacta gaattaatgt gttcacacag gttctagaaa
     8941 catcagagga gtataaattg gtaaataaag gcccagaaat ttctccttct gctcaagata
     9001 ctctattaga aaaaattcga ttgctaggtt cagatgatta tttagttatt tcaggaagtc
     9061 ttcctagagg aattgattcc agttatttag ttaagatagc tgagataacc gatgaaaata
     9121 aagtatcttt aattttagat attagtgatc cagttattct cacttgccta aagtataagc
     9181 catatctgat taagccaaat gatgaagaga ttgcacagtg gtttggagtg accgaaattt
     9241 cagaagatgc cattttagta tatggaaaaa cgcttcaaga caaaggtgca agaaatgtac
     9301 tgatatcttt aggtggtaag ggagcagtaa tgtttacgga cagtggagaa atatttactt
     9361 gcaacgctcc gaaaggagaa gtggtaaata ctgcttgtgc gggagatact actcttggta
     9421 cttttttagg atcaaaaatc ttgggtctat caactgagaa atccttaatc aaagcggttg
     9481 ctgcaggctc ttcgacagca tttagaagtg gactaacgga tttttcagat gtcgatgaat
     9541 taagtaaaca aatattacta aaaaaaatgg aggtaaagta gatggctact tataaattga
     9601 ttgcagctac tggttgtcca actggtatag cacatacatt catggctcaa gaagcacttg
     9661 agcaagcagc aaaagagcgt aacgtttcta tcaaggtaga aactcatggt caaattggta
     9721 ttgagaacga gttgacagct gaagaaattg ctgcagcaga tgcggttatt attgcagctg
     9781 acaaggatgt aaacgcagaa cgctttgcag ggaaacgtgt cattgagact tcagttgggg
     9841 aaggtattaa aaatgcttct aaattgattg atgatgctct atctggtaaa ggtgttgtaa
     9901 aagcaggtga agctattaag caagaatctt catcagcagg taatgagagt tttggacgtc
     9961 aaatctataa acatctaatg aacggtgtgt ctcacatgct tccatttgta gttgcaggag
    10021 gagttttgat tgccatttca ttcctatttg gtattttttc atttgaccca aatagtgaac
    10081 aatataatcc ttttgctgct atgttgaaaa atgacattgg tggtgtagca atgggtatga
    10141 tggttcctgt tttatcagct tatattgccg aatctattgc taagcgtcct ggatttgtat
    10201 caggtcttgt cgctggtttg atggccgcaa atggaggatc aggattctta ggtggtatcg
    10261 ttggtggttt cgctgctggt tatattgttt tggctctaat gaaactattt aagggattgc
    10321 caaaatcact agatggtttg aaagctattt tcctatatcc attgttcggt gtatttgtta
    10381 ctggattatt tatggtggca gtgaactctc caatgacatg ggtaaatgaa tctatgatgg
    10441 cttggctcgc aggatttgaa aatgccaatc ctataattct tggaattatt attggatgca
    10501 tgtctgcttt tgatatgggt ggtccagtaa ataaagcagc gtatgtaaca ggtacagccc
    10561 ttctagcaca aggaaatact agctttatgg caggtgtttc tgcagcatgt attgtcccac
    10621 cattgacaac ttttgttgct acaacagtat tccgtaaata ttactctgat gaagattgca
    10681 atgcaggtct tgcaaattta atcttaggtt ctacacacat tactgaaggt gctatcccat
    10741 tcgctgcaaa agatccactc cgtaatctac caacattgat gcttgggtca tcaattggtg
    10801 cagtgttaac ttatctttgg ggtgtaaaag tccctgctcc acacggtgga ttcttagtcc
    10861 ttcctgtagt aacaaatgct ggactttggg tgttagcaat tgcaattgga gctattattt
    10921 caggattact tctaggatat attcaaaaaa ctaaaattga aaaggtataa gaggtacatt
    10981 aatgatagat aagaaattag tacaagttga tgtgtctgct tcatcaaagg agagtgtgtt
    11041 tgattgttta tcacaactgg tttttgaaca tggatatgca acagacattg ccttagttaa
    11101 agaagcactt cttgcaaggg aagatgaagg tactaccgga atgatggatg gttttgccat
    11161 tccacatgct aaatcttctg caatcacaaa acctggcgta gctgtattga aattggctaa
    11221 tggtgttgaa tggcagtcaa tggatggtca acctatcact tcagttattg cactatttat
    11281 tccggaaacg gaagcaggta ccactcactt aaaattttta tcaaagattg ctcgtttact
    11341 catgaagaca gagttcaaaa tatcttttac aaatgctaat agtgtagatg aaattgttga
    11401 gctattgaag aaacacttag tgtaatcatc attatctcct gacgtataga gtagatgtca
    11461 ggagatttct ttattaagga aggaataaaa atggtaaaaa atctatctaa gttaatgaca
    11521 aagaatggca ttatatcagc tcttgctttt gaccaacgtg gcgccttgaa aaagatgatc
    11581 gcaaaacatc agacagaaac tccaaccgta gagcaaatgg aaaagttgaa aactctagta
    11641 tctgaagagt taacacagtt ttcttcttct attcttttag atcctgaatt tggcttacca
    11701 gcttcacacg cccgtgatga acaatgtggc ttacttttgg cctatgaaaa aactggctat
    11761 gacaccagct ctaccaatcg tttgccagat tgcctagtag aatggtctgt aaaacgacta
    11821 aaagaagtgg gggcagatgc cattaagttt ctactctact atgacgttga tggtgatcca
    11881 tacgttaatc ttcaaaaaca tgcctatatt gaacgtttag gttcagaatg tcaggcagaa
    11941 ggtttgccat tcttcttgga gattttgagc tatgatgaaa cgattgaaga caatgctagt
    12001 gttgagtttg cgaaagcaaa acctagaaaa gtaaatgaag ccatgagagt attttcggac
    12061 gaacgctttg gagtagatgt tctcaaggta gaagtacctg tgaacatgaa ttttgtagaa
    12121 ggctttggaa caggggaagt cgtttataca aaagaagaag cagc
//
LOCUS       DASFQS010000067        11991 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.069, whole genome shotgun sequence.
ACCESSION   DASFQS010000067 DASFQS010000000
VERSION     DASFQS010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11991
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.069"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(444..1799)
                     /locus_tag="U1041_001571"
     CDS             complement(444..1799)
                     /locus_tag="U1041_001571"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM4768675.1"
                     /translation="MKVIKFGGSSLASAGQLEKVFNIVQSDSERRFVVVSAPGKRNAE
                     DTKVTDALIKYYKEYVNGKDVTASQEWIINRYQAMVDELGFTANSMKKIADSIISLAS
                     LPIDDNEFLYDAFLAAGEDNNAKLIAEYFTHRGLPARYVHPKKAGIVVSSEPGNARIL
                     PSSYDKIEELRDTDEVLIIPGFFGVTVDNQICTFSRGGSDITGSIIAAGVKADLYENF
                     TDVDGIFAAHPGIIKDPHSIKELTYREMRELAYAGFSVLHDEALLPAYRGRIPLVIKN
                     TNNPTHPGTRIVHKHTEQTVPVVGIAADDGFVSINLSKYLMNREVGFGRKVLQILEDL
                     NIRWEHMPTGIDDLSIVVRERELTPIKEEEILRQLNTKMEVDKAEIEHGLSIIMIVGE
                     NMKSHVGVTATATTALSKQNVNLAMISQGASEVSVMFVVKTEEKKRALHALYKAFFNE
                     Q"
     gene            1976..2617
                     /locus_tag="U1041_001572"
     CDS             1976..2617
                     /locus_tag="U1041_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEM4768676.1"
                     /translation="MVKAIIFDMDGVLFDTETFYFQRRVDFLATKGLSVDHLAPSIFV
                     GGRASQIWQRILGDDYDNWDVPALEEEYRVYKEKRPTPYAERIFPEVKAVLERLTIQG
                     IPVVLASNTDRSEIERALLDAGIRSHFSHVFSAMDCEAPKPDPTVYMKAASATGVAKS
                     DILVFEDSAKGIEAAKKAGLTVWAIRDQHYGIDQSKADKLIDNLEEAFDLLRF"
     gene            3053..3844
                     /locus_tag="U1041_001573"
     CDS             3053..3844
                     /locus_tag="U1041_001573"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEM4768677.1"
                     /translation="MDYQTIRYEVIDSVAILTLNRPEVANGFNIPMCEEILEAIRLAE
                     GDASVKILQIQAQGSIFSVGGDLVEMKRAVDDDDIASLVKIAELVNDISFAMKKLSKV
                     VIMVTDGAVAGAAANMAVAADFVIASSKTKFIQAFVGVGLAPDAGGLFLLSRAIGANR
                     ASHLAMTGEGLSADKALEYGIIYKLAEPEKLEKTVAQVIKKLLRGSVNSYAAIKQLTW
                     ESQFKDWESYRRLELDLQETLAYKEDFKEGVRAHAERRRPVFTGD"
     gene            3925..4359
                     /locus_tag="U1041_001574"
     CDS             3925..4359
                     /locus_tag="U1041_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM4768678.1"
                     /translation="MEDPKVNEYLTAIFNNVLVIEETSLRGSRFNDISIKEMHTIDVI
                     GSIDGATPSDVARTLMVTLGTVTTSLNNLERKGYVERIRSTKDRRVVHLYLTKKGRLV
                     YRLHQRFHNEMVKQITDGMDETEYQVMKKGLMKLYHFLEDLK"
     gene            4356..5333
                     /locus_tag="U1041_001575"
     CDS             4356..5333
                     /locus_tag="U1041_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEM4768679.1"
                     /translation="MRNHAKISQVAHYLPKKIVTNDDLAQQMDTSDEWIRSRTGIGQR
                     HIVTGETTSDLASQVARKLLEKSQLDASEIDFIIVATITPDASMPSTAAMVQAAIGAK
                     NAFAYDLVAACSGFVFALSTAEKLLASGVYKRGLVIGAETLSRSVDWSDRSTAVLFGD
                     GAGGVLLEACEQPTFLAEILRTDGGRGASLTAGIDQKETPFSTQSRQQPFIQMEGRAI
                     FEFATRDVTATMAELLEQADMTVDCVDYFLLHQANIRILDKMARKLGVAREKFPANMD
                     KYGNTSAASLPILLSECVESGMLRLDGSQTVLMAGFGGGLTWGTLLLQL"
     gene            5393..5617
                     /locus_tag="U1041_001576"
     CDS             5393..5617
                     /locus_tag="U1041_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEM4768680.1"
                     /translation="MAVFEKVQEIIVEELGKDAEEVTLTTTFEDLDADSLDLFQVISE
                     IEDAFDIQIDTEEGLTTVGDLVAYVEEKTK"
     gene            5787..6752
                     /gene="fabK"
                     /locus_tag="U1041_001577"
     CDS             5787..6752
                     /gene="fabK"
                     /locus_tag="U1041_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase FabK"
                     /protein_id="HEM4768681.1"
                     /translation="MKMKITELLDIKYPIFQGGMAWVADGDLAGAVSNAGGLGIIGGG
                     NAPKEVVKANIDKVKSITDKPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKY
                     MERLHAAGITVIPVVPSVALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMTLVRQVVEA
                     VSIPVIAAGGIADGAGAAAAFMLGAEAVQVGTRFVVATESNAHQAYKEKVLKAKDIDT
                     TVSASVVGHSVRVIKNKLSTAYAVAEKDFLAGKISAESIEELGAGALRNAVVDGDVVN
                     GSVMAGQIAGLVTKEETCEEILKDLYFGAAKVIREEANRWASVGE"
     gene            6754..7674
                     /gene="fabD"
                     /locus_tag="U1041_001578"
     CDS             6754..7674
                     /gene="fabD"
                     /locus_tag="U1041_001578"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEM4768682.1"
                     /translation="MTKTAFLFAGQGAQTLGMARDLYDTYPIVKETYDQASQILGYDV
                     RDLIDHQEDKLNQTRYTQPAILTTSLAIHRLLAEKGIEPDMVAGLSLGEYSALVTSGA
                     LAFEDAIALIAKRGEFMETAAPAGTGKMVAVLNADVSLIEEVCSSVTSGIVSPANYNT
                     PAQIVIGGEVAAVDEAVEALKVTGVKRMIPLNVSGPFHTALLRPASEQLAQALEEVEF
                     ADFQVELVGNTEAKVMKKEDIKSLLTRQVMEPVRFYESIATMQAAGVTKFIEIGPGKV
                     LAGFIKKIDKTAEVVTVEDVASLTDLLTSQ"
     gene            7684..8418
                     /gene="fabG"
                     /locus_tag="U1041_001579"
     CDS             7684..8418
                     /gene="fabG"
                     /locus_tag="U1041_001579"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEM4768683.1"
                     /translation="MELTNKNVFVTGSSRGIGLAIAHKFASLGANVVLNGRGQLGQDL
                     LDSFADYGVKVVAISGDISSSADAKRMVAEAVEALGSVDILVNNAGITKDGMALRMTE
                     EDFESVLSINLTGTFNMTQAVLKPMTKAREGAIINLSSVVGLTGNAGQANYAASKAGV
                     IGFTKSIAREVASRNVRVNAIAPGFIQSDMTDVLPDKIKDAMLGQIPMKRFGLTEEVA
                     DVAVFLAKQEYLTGQVIAIDGGLTMQ"
     gene            8432..9667
                     /gene="fabF"
                     /locus_tag="U1041_001580"
     CDS             8432..9667
                     /gene="fabF"
                     /locus_tag="U1041_001580"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEM4768684.1"
                     /translation="MTKLNRVVVTGYGLTSPIGNTPEEFWDSLVNGKIGIGKITKFDT
                     SEYSVHNAAEIKDFPFDKYFVKKDTNRYDNYSLYALYAAREAVTNAGLDTEAVDSDRF
                     GVILSTGIGGILEIEEQVARMNEKGPKRIRPMALPKALPNMAAGNIAMQVGANGVCKC
                     VITACASSNDALGEAFREIKFGFQDVMLAGGSEAAITPFAIGGFQALTAMSTTEEPER
                     ASIPFDKDRNGFVMGEGAAVLVLESLEHAEARGATILAEIVGYGNTCDAHHMTSPHPE
                     GLGAIKAMKLAISEAGLEPADIDYINAHGTSTPANEKGESQAIVSVFGKNTPVSSTKS
                     FTGHLLGAAGAVEAAAVIEAMRHSHAPKTAGTTELSDYIEADVIFGQGRDMEIRHAIS
                     NTFGFGGHNSVIAFKRWEA"
     gene            9668..10144
                     /locus_tag="U1041_001581"
     CDS             9668..10144
                     /locus_tag="U1041_001581"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEM4768685.1"
                     /translation="MNITEIKDLMSQFDQSSLREFSYSNAGETLHFSKNQQATVAPSP
                     IVEAPLAPVAPASPAPVPAVETSEQAPVEVSSSSVAEGAVVESPLVGVAYLSPAPDKP
                     AFVTVGDTVKKGQTLMIIEAMKVMNEVPADRDGVVTEILVANQDVVEFGQGLVRIK"
     gene            10141..10563
                     /gene="fabZ"
                     /locus_tag="U1041_001582"
     CDS             10141..10563
                     /gene="fabZ"
                     /locus_tag="U1041_001582"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEM4768686.1"
                     /translation="MIDIVKIKEALPHRHPMLLVDRVLEVSEDEIVALKNVTINEPFF
                     NGHFPDYPVMPGVLIMEALAQTAGVLELSKEENKGKLVFYAGMDKVKFKKQVVPGDQL
                     IMTAKFVKRRGTIAVVEAKAEVDGKLAASGVLTFAIGR"
     gene            10589..11956
                     /locus_tag="U1041_001583"
     CDS             10589..11956
                     /locus_tag="U1041_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEM4768687.1"
                     /translation="MFEKILIANRGEIAVRIIRAARELGIATVAVYSEADKEALHTML
                     ADEAVCIGPARSTDSYLNMQAVISAAVVTGAQAIHPGFGFLSENSKFATLCEEVGIKF
                     IGPSGTVMDTMGDKINARAEMIKAQVPVIPGSDGEVLTSQEALAIAEKIGYPVMLKAS
                     AGGGGKGIRKVEKAEDLVPAFESASSEAKAAFGNGAMYMERVVYPARHIEVQILADQH
                     GHVIHLGERDCSLQRNNQKVLEEAPSIAIGQTMRDRIGQAAVRAAQSVGYENAGTIEF
                     LLDEAKGEFYFMEMNTRVQVEHPVTEFVTGVDIVKEQIKIAAGQELSVRQEDVKITGH
                     AIECRINAENPAFNFAPSPGKISNLYLPSGGVGLRVDSAVYPGYTIPPYYDSMIAKVI
                     VHGENRFEALMKMQRALYELEIDGVVTNTDFQLDLISDKRVVAGDYDTAYLMEEFLPR
                     YQAEL"
BASE COUNT         3370 a         2317 c         2992 g         3312 t
ORIGIN      
        1 aagcattgag ttatgcctgt ggcttttgat gtgaacatcg ttcactttgt ccccagtctc
       61 caactatctc ccagatagtt ggagcgagta ctaaaagtaa actaaaagac tataatgagg
      121 ctggtcaaaa agtctaatac tcttcgaaaa tcaaaattat ccgttgtcaa cttgccttga
      181 tgaactccag ttctatcttc gacttcgttt cctaggctac ttttgatttt cattgagtat
      241 aaaaaataaa aaatagctta gaattgcatc gtcagaaacg ttgattctaa gctatttttg
      301 tttattcaaa ttttaattgg tactcaatga aaattaaaat cagactagct ccaatggagc
      361 ttgacactca tcaaatcaag tcaacaacgt ctggttttga ttttcgaaga gtatgaagag
      421 ggaactgacc gccctcgttg tgattattgc tcgttaaaaa aagctttata gagtgcatgc
      481 agagcgcgtt tcttttcttc ggttttgaca acgaacataa cagaaacttc actggctccc
      541 tgtgaaatca ttgccaagtt gacattttgt ttagagaggg cagtggtagc ggtagctgtt
      601 acaccgacat ggctcttcat attttcacca acaatcatga taatagataa accatgttcg
      661 atttcggcct tgtcaacttc cattttcgta ttgagttgac gaaggatctc ttcttccttg
      721 ataggagtca attcacgctc acggactacg atggataaat cgtcaatacc ggtcggcatg
      781 tgctcccagc gaatattgag atcttcgaga atttgcaaaa ccttgcgacc aaaaccaact
      841 tcacggttca tcaaatattt agacaagtta atgctgacaa aaccatcgtc tgcagcaata
      901 ccgacaacag gaactgtttg ctcggtatgt ttgtgtacaa ttcgggtacc agggtgagtt
      961 gggttattgg tgtttttaat aaccaatgga atccgtccgc gataggcagg aaggagggct
     1021 tcatcgtgga ggacggagaa acctgcataa gctaattctc gcatttcacg ataggtcaat
     1081 tctttgattg aatgtggatc tttaatgatg ccaggatggg cagcaaaaat accatcgaca
     1141 tctgtaaagt tttcatagag gtcagccttg actccggcag caatgatgga acctgtaata
     1201 tccgatccac ctcgtgagaa ggtacaaatc tggttatcaa cagttacacc gaagaatcct
     1261 ggaataatga gtacttcatc tgtatcacga agctcttcga ttttgtcata acttgaaggc
     1321 aaaatgcgag catttcctgg ttcggagctg acaacaatac cagctttttt aggatggaca
     1381 tagcgtgcag gcaatcctct gtgggtaaaa tattcggcaa tcaatttggc attattatct
     1441 tcaccagctg ctaagaatgc gtcgtaaagg aattcgttat catcaattgg taggctggcc
     1501 aaagagatga tgctgtctgc gattttcttc atgctgttag ctgtgaaacc aagttcgtca
     1561 accattgcct gataacggtt gatgatccat tcttgactgg cagtcacatc ttttccgtta
     1621 acatattctt tataatattt aatcaacgca tcagtaactt tagtatcctc ggcattgcgt
     1681 tttccaggtg cagacaccac aacaaagcga cgttctgaat cagattgaac aatattgaaa
     1741 actttttcta actgtccagc tgaagcaagt gagcttcccc caaatttaat aactttcatt
     1801 ttcatctcct tggatatttt tttctattat agcagaatga tatgaaattg tcagtatgtt
     1861 cagacaaatc ttgccaagaa ttttatcgaa aaacgaacaa gagacaagta tgaaaatttc
     1921 agaaaaacat ttttttcttt caactgtgtt acagttaaag gaataggagg cgattatggt
     1981 aaaagcaatt attttcgaca tggatggtgt actttttgac acagaaacat tttattttca
     2041 acgtcgagtg gattttttag cgacaaaagg tttatcggtt gatcatttgg ctccatctat
     2101 atttgtcggt ggaagggcta gtcaaatttg gcaacggatt ttaggggatg attatgataa
     2161 ctgggatgtc cctgccttgg aagaagaata tcgtgtgtat aaagaaaagc gaccaacccc
     2221 ttatgcagag aggatttttc ctgaagttaa agcggtattg gagagactaa ctatccaagg
     2281 tattcctgta gttttggctt caaatactga ccgttcagaa atcgaacgtg ctctactaga
     2341 tgctggtata cgctctcact ttagtcatgt tttctcagcg atggattgtg aggccccaaa
     2401 accagatcct acagtttata tgaaagcagc tagtgcaaca ggagtagcta aatcggacat
     2461 tttagtattt gaagatagtg cgaagggaat tgaagcggct aaaaaagcag gtttgacagt
     2521 ttgggctatt cgagaccagc attatggaat tgatcagtcg aaagcagaca aattgataga
     2581 caatcttgaa gaggcctttg acttactgcg attttaagaa atatgatatt gtatccaagt
     2641 attagttctt ggtgaaaaat ggtatttcta gctcagaatc cagttagagc ttccaaaagt
     2701 attaacgtga aaaaatgaaa gttgtaaatt aaacttagag cctatattta tagttcagac
     2761 ttgcatattg aggttgtttt ttcaaaatac agtcagtatt tcccgcaaaa actaccttga
     2821 tgagtgaaaa agccaaggcg ctttgcgtgt gaatataggt tcttagacac gttattttct
     2881 agcatatcta aattttatat tgcgatgatg gcctccatct ttttcggacg tcacactttc
     2941 cttgctagaa aaaagtgaca attttaaaaa ctgtgttaca atggaaaaca agaatttgaa
     3001 gtttgatatt caaatctttt aattatcaaa ctattttgaa aggagcaagg gaatggacta
     3061 ccaaacaatt cgttatgaag taattgattc cgtagcgatt ctaactttaa acagaccgga
     3121 agtggcaaat ggttttaata ttcctatgtg tgaagaaatc ttagaagcaa tccgccttgc
     3181 agaaggggat gcctccgtca aaattttaca aattcaagca cagggttcca ttttctccgt
     3241 gggtggagat ttagttgaga tgaagcgtgc agtggatgat gatgatattg cttctttagt
     3301 aaaaatagca gagctggtga atgatatttc gtttgcgatg aagaaattgt ctaaagtagt
     3361 cattatggtg acagatgggg cagtggctgg agccgcggct aatatggcag tggcagctga
     3421 ttttgttatt gcctccagca agacaaaatt catccaagcc tttgtaggcg ttggacttgc
     3481 gccggatgcg ggggggctct ttctactgag tcgtgctatt ggggctaatc gtgctagtca
     3541 cttggcgatg actggagagg gcttatcagc ggataaggct ttagaatatg ggattattta
     3601 taaattggca gagccagaaa aactagaaaa gacagttgcc caggtcataa aaaaactctt
     3661 gcgaggctca gtaaactctt atgcagcaat caaacaactg acatgggaaa gccaatttaa
     3721 agactgggag tcttatcgcc gattggagct ggatttgcaa gaaacattgg catataaaga
     3781 ggattttaaa gagggagttc gagcgcatgc agaacgacgt agaccagtgt ttacgggaga
     3841 ttaattttta aattcgtaaa aaaatgtttg acaatcaaag ttttatggtt tatactttga
     3901 ctatcaaagt aaaggaggcc tgttttggaa gatccaaaag taaatgaata tctaacggcc
     3961 atttttaata atgtgttggt gattgaagaa acaagtctgc gtggtagccg attcaatgat
     4021 atttcgatta aggaaatgca cacgattgat gtgataggaa gtattgatgg agctactccg
     4081 agtgatgttg ctcggacttt gatggtaacc ttgggtactg ttacaactag cttgaacaat
     4141 ttggaaagaa aaggatatgt tgagcgtatt cgttcgacca aagatcggcg agttgttcat
     4201 ctctacctga ccaaaaaagg tcgactggtc tatcgtttgc atcaacgatt tcacaatgaa
     4261 atggtgaaac agattacaga tggtatggat gaaacagagt atcaggtaat gaagaaagga
     4321 ctcatgaaac tctatcactt cttggaggat ttgaaatgag aaaccatgct aaaatcagtc
     4381 aggtggccca ctatcttccg aagaagattg tgaccaatga tgatttggcc cagcaaatgg
     4441 ataccagtga tgagtggatt cgtagccgta caggtatcgg tcaacgacac attgttactg
     4501 gagagacgac gagtgatttg gctagtcaag tggctagaaa attactggaa aagtctcagc
     4561 tagatgctag tgaaattgac ttcatcatcg tagcaacgat tactccagat gcttcaatgc
     4621 catctacggc agctatggtt caagcagcaa ttggcgcgaa aaacgctttt gcctatgatc
     4681 tcgttgcagc ttgttcagga tttgtttttg cgctatcaac agcggaaaaa ttgcttgctt
     4741 caggagtcta taagagagga cttgtcattg gtgcagagac cctatctagg tctgttgact
     4801 ggtcggatcg atcaacggct gttttatttg gagatggtgc tggaggagtt ttgctggaag
     4861 cgtgtgaaca accgaccttt ttagcagaaa tcttgcgaac ggatggcggt cgaggtgcta
     4921 gtctgacagc agggatagac cagaaagaga cgccattctc gacacaaagc cgtcagcaac
     4981 cctttatcca aatggagggt agagctatat ttgaatttgc tacgagggat gttacggcaa
     5041 ccatggcaga gctgctagaa caagctgata tgactgtgga ttgcgttgat tatttcttgc
     5101 tccatcaagc caatatacgt attctggata agatggctcg taaattggga gtggcgcgtg
     5161 aaaaatttcc agcaaatatg gataaatatg gcaataccag cgcagcaagt cttcctattc
     5221 tcttatcaga atgtgtagag agcggaatgt tgcgattgga tggaagtcaa acagtcctta
     5281 tggctggttt cggtggaggc ctcacatggg gaactctact cttacaactt tagttaattc
     5341 cttgccctag gcaagattaa aatattttat tttccaaaag gagacacata tcatggcagt
     5401 atttgaaaaa gtacaggaaa tcattgttga agaattgggt aaggatgctg aagaagtaac
     5461 tcttacaaca acatttgaag atttggacgc agattcattg gatcttttcc aagttatctc
     5521 tgaaatcgaa gatgcattcg acatccaaat cgacactgaa gaaggtttga ctactgtagg
     5581 cgatttggtt gcctacgttg aagaaaaaac aaaataatga ctgttaagga aagtgctatt
     5641 tagcattttt cttaaaataa atactttgat aatcaaaaca ttgagatatc aaactatttt
     5701 ttgagtgagg gggcaaccct tcacttgttt acctaatgat ttgatattca aatgattagg
     5761 taagcaagaa aaaagatgag ggaattatga agatgaaaat aacagaattg ctcgatatta
     5821 agtatccaat ttttcaaggt ggtatggctt gggtagctga tggagatttg gctggtgccg
     5881 tatctaatgc aggtggtcta ggaatcatcg gcggaggaaa tgctccaaaa gaagtcgtta
     5941 aggcaaacat tgataaagtc aagtccatca cagacaagcc tttcggtgtc aatatcatgc
     6001 tcctatcgcc ttttgcagat gacattgttg acttggtcat cgaagaaggt gtgaaagttg
     6061 tcaccacagg agcaggaaat ccagggaagt atatggagcg tctccatgct gcagggatta
     6121 cagttattcc tgttgtacca agtgtagccc ttgctaaacg catggaaaaa ctgggtgtgg
     6181 atgccgtcat cgctgaaggg atggaagccg gaggccatat tggtaaattg accaccatga
     6241 ccttggttcg tcaggttgtt gaagccgtat ctattcctgt tattgctgct ggaggtattg
     6301 cagatggtgc aggtgctgct gcggccttta tgttgggagc agaagcggtg caagttggaa
     6361 ctcgttttgt agtagctaca gagtccaatg cccatcaggc ttataaggaa aaggtcctca
     6421 aggctaagga tattgacaca acagtatcgg catccgttgt aggtcactcg gtgcgtgtga
     6481 ttaaaaacaa gctttcgaca gcctatgcgg ttgcggaaaa agacttcctt gctgggaaaa
     6541 tttctgcaga atccattgaa gaactgggtg caggtgccct tcgcaatgcc gttgttgatg
     6601 gtgacgtggt caatggttcg gttatggcag gtcagattgc tggcttggtg actaaagaag
     6661 aaacctgtga agaaattttg aaagatttat attttggtgc ggccaaggtg attcgcgaag
     6721 aggcgaatcg ctgggcatct gttggagaat aagatgacaa aaacagcctt tctatttgca
     6781 ggtcaagggg ctcagacact tggtatggct cgtgaccttt atgatactta tcctattgtc
     6841 aaggaaactt atgaccaggc tagtcagatt ctgggctatg atgtgcggga cttgattgac
     6901 caccaggaag acaagctcaa ccagacccgc tatactcagc ctgcgatttt gacaacttcc
     6961 cttgccattc atcgtttgtt ggcagaaaag gggattgagc cagatatggt agctggtcta
     7021 tccttgggag aatattctgc tttggttacc tccggtgcct tggcctttga agacgctatt
     7081 gccttgattg ccaaacgagg tgagtttatg gagacggctg caccagcagg gactggtaag
     7141 atggtcgctg tcctcaatgc agatgtcagc ttgatcgaag aggtctgttc atcagttacc
     7201 tctgggattg tttccccagc caactacaac acaccagccc aaatcgtcat cggaggcgag
     7261 gtggctgctg tggatgaggc ggtggaagcc ttgaaggtga cgggagtcaa acgcatgatt
     7321 cccctcaatg tgtcggggcc tttccatacg gctctcttgc gtccagcgtc ggagcaactg
     7381 gctcaggctc tggaagaggt ggagttcgca gacttccaag tagaattagt tggcaataca
     7441 gaagccaagg tcatgaaaaa agaagacatc aagtccctct tgacccgtca ggtcatggag
     7501 cctgttcgct tttacgagtc cattgcaacc atgcaggcag ctggtgtgac caagtttatc
     7561 gaaatcggtc cgggtaaggt cttggcaggc tttatcaaga aaattgataa gacagctgag
     7621 gttgtgacag tagaagatgt ggcaagtcta acagacttgt tgactagcca ataaggagaa
     7681 atcatggaac ttaccaataa aaatgtgttt gtgacaggtt caagtcgtgg aatcggcttg
     7741 gccattgccc ataagtttgc tagccttggt gccaatgtgg tgctgaatgg tcgaggtcag
     7801 ctggggcagg acttgctgga tagctttgca gattacggtg tcaaagtagt tgcgatttca
     7861 ggcgatattt ccagctcggc agatgccaaa cggatggtgg ctgaggcagt tgaggctctc
     7921 ggtagcgtcg atatcttggt caacaatgca gggattacca aggatggtat ggccttgcga
     7981 atgacggaag aagatttcga gagcgttttg agtatcaatc taacagggac ctttaacatg
     8041 acccaggctg ttttgaaacc gatgaccaag gcacgtgaag gggcaattat taacctttcc
     8101 agtgtggtcg gtttgacagg gaatgctggt caggccaact atgctgcttc taaggcgggt
     8161 gtaattggtt ttacaaaatc cattgctcgt gaagtcgcta gtcgcaatgt tcgtgtcaat
     8221 gctatcgcac caggctttat ccagtcagat atgacagatg ttctgcctga caaaatcaag
     8281 gatgccatgt tggggcaaat tcctatgaaa cgtttcggtt taacggaaga agtggcagat
     8341 gtcgctgtat tccttgccaa gcaagagtat ctgacaggtc aggtcattgc cattgacggc
     8401 ggcttgacta tgcaataagg gaggtttgaa aatgacaaaa ttaaatcgtg tagtagtaac
     8461 aggctatggt ctgacatcgc caattggcaa tacgccagag gaattctggg atagcctggt
     8521 caatggtaag attggaatcg gaaagattac caagtttgat accagtgaat actctgttca
     8581 taatgctgcg gaaataaagg attttccttt tgacaaatac tttgttaaaa aagatactaa
     8641 ccgctatgac aattactccc tctatgctct ctatgcagct cgtgaggcag taaccaatgc
     8701 tggtctggat acagaagcgg ttgatagtga ccgttttggc gttatcttat caacaggtat
     8761 cggtggtatt ttggaaattg aagagcaagt ggctcggatg aacgaaaaag gtccaaaacg
     8821 cattcgtccc atggctcttc caaaggcctt gccaaacatg gctgctggaa atattgctat
     8881 gcaggtcggt gcaaatggtg tctgtaagtg tgtcatcaca gcctgtgctt cgtcaaatga
     8941 tgccttagga gaagccttcc gtgaaatcaa gtttggcttc caagatgtta tgctggcagg
     9001 tggttcagaa gcggctatta cgccttttgc aatcggtgga ttccaggctt taacagcgat
     9061 gtcgacgact gaggagccag aacgtgcttc cattcccttt gacaaggacc gcaatggttt
     9121 tgtcatggga gaaggggctg ctgtcttggt attagaaagc ttggagcacg cagaagcacg
     9181 tggggcaact atcttggctg aaatcgttgg ttatggaaat acctgcgatg cccaccacat
     9241 gacttctcca catccagaag gtctgggtgc tattaaggct atgaagttgg ccatttcaga
     9301 agcaggttta gagccagctg atattgacta tatcaatgcc catggaactt cgacaccggc
     9361 taatgaaaaa ggggaaagtc aggctatcgt atccgtcttc ggaaagaaca cgccagtttc
     9421 ttccaccaag tccttcacag gtcatttgtt gggggcggcg ggtgccgttg aagcagctgc
     9481 tgttattgag gcgatgcgtc attctcatgc accaaagaca gcaggtacga cggagttgtc
     9541 tgactacatc gaggcggatg tcatcttcgg tcaaggtcgt gacatggaaa tccgtcatgc
     9601 catttcaaat acatttggct ttggaggtca caactcagtg attgccttca agcgttggga
     9661 ggcttaagtg aatattacag aaattaagga cctgatgagt cagtttgacc agtcaagttt
     9721 gcgagaattt tcatatagca atgctggaga aaccttgcat ttcagtaaaa atcagcaggc
     9781 gacagtggct ccgagtccaa tcgtagaagc tccgcttgct ccagtagctc ctgcaagccc
     9841 agcccctgtt ccagcagttg aaaccagtga gcaagctcca gtagaagtta gctcaagttc
     9901 tgtggcagaa ggtgcagtgg tggaaagtcc gctggtaggc gtggcttatt tgtcgccagc
     9961 tcctgacaag ccagcctttg tgacggttgg ggatacggtt aaaaaaggac agaccctcat
    10021 gattatcgaa gccatgaagg tcatgaacga agtgcctgct gatcgtgatg gtgtggtcac
    10081 agagattttg gtggccaacc aggatgttgt agaatttgga caaggattgg tacgcatcaa
    10141 atgattgata ttgtaaaaat taaagaggcg cttcctcatc gccaccctat gctcttggtc
    10201 gatcgtgtcc ttgaagtatc ggaagatgag attgtggccc tcaaaaatgt gaccattaac
    10261 gagcccttct tcaacgggca tttcccagac tatcctgtta tgccaggcgt tctcatcatg
    10321 gaggctttgg cacaaaccgc aggtgtcttg gagttatcca aggaagaaaa caagggcaag
    10381 ctggtttttt atgccggcat ggacaaggtc aaatttaaga agcaagttgt acctggtgac
    10441 cagttgatca tgacagctaa atttgtcaaa cgccgtggaa ctattgcggt cgttgaggca
    10501 aaggcagagg tggatgggaa actggctgcg tctggagtgt tgacttttgc tattggcaga
    10561 taatatttaa aaggagatag gattcatcat gtttgagaag attttgattg ccaatcgtgg
    10621 tgagattgcg gtgcggatta ttcgtgcggc cagagagttg gggattgcga cggtggctgt
    10681 ctattcagag gctgacaagg aagccctcca caccatgttg gcagatgagg ctgtctgtat
    10741 cggcccagcc cgttcgacag actcctatct caatatgcag gcggtcatct cggcggcagt
    10801 tgtgacaggt gctcaggcta ttcatcctgg ctttggcttt ttgagtgaaa actccaaatt
    10861 cgccaccctt tgtgaagagg tcggtatcaa gttcatcgga ccttcgggga cggtcatgga
    10921 taccatgggc gataaaatca atgcacgggc agagatgatt aaggcccaag tgcccgtcat
    10981 tcctgggtca gacggcgagg tcttgaccag ccaagaagct cttgcaatcg ctgaaaagat
    11041 tggctaccct gtcatgctca aagcatcggc aggaggtggc ggtaagggga ttcgtaaggt
    11101 ggaaaaagcc gaagacttag tgccagcctt cgaatcagct tccagcgaag ccaaggcagc
    11161 ctttggcaac ggagccatgt atatggagcg tgtcgtctat ccagcccgcc acatcgaagt
    11221 acagattttg gcggaccagc acggtcatgt catccatctg ggagaacggg attgttctct
    11281 tcaacgcaac aaccagaagg tcttggaaga agctccgtcg attgctatcg gccagaccat
    11341 gcgggaccgt atcggtcaag cagcggtgcg ggctgcccaa tcagtcggct atgaaaatgc
    11401 gggaaccatt gagttcctct tggacgaagc caagggcgaa ttctacttca tggaaatgaa
    11461 tacacgggtg caggtggaac atcctgttac cgaatttgtc acgggtgtgg acattgtcaa
    11521 ggagcaaatc aagatcgcgg ctggtcagga actcagcgtc cgtcaagaag atgtgaagat
    11581 tacaggtcat gccattgaat gccgtatcaa tgctgagaat ccagccttta actttgcccc
    11641 aagtccaggt aagatttcca acctctacct gccaagtggg ggagtcggtc tgcgtgtaga
    11701 ttcagctgtt taccctggct acaccattcc gccttactat gattcgatga tagccaaggt
    11761 catcgtgcac ggggaaaatc gttttgaagc cctgatgaag atgcagcgag ccctctacga
    11821 attggaaatt gacggagtgg tgaccaatac ggacttccag ctggacttga tttccgacaa
    11881 gcgagtggtg gctggtgatt atgacaccgc ctatctcatg gaagaatttt taccccgcta
    11941 tcaagcagaa ttatagtctt ttagtttact tttagtacta ggaaacgagc c
//
LOCUS       DASFQS010000068        11806 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.070, whole genome shotgun sequence.
ACCESSION   DASFQS010000068 DASFQS010000000
VERSION     DASFQS010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11806
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.070"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..321
                     /locus_tag="U1041_001584"
     CDS             <1..321
                     /locus_tag="U1041_001584"
                     /inference="COORDINATES: protein motif:HMM:TIGR01167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4768688.1"
                     /translation="STEVEPLVIETPVALIKGVSAVTESSSTLTNLVYPVIEVSTQLT
                     LGNTNNEALYSATTVSRQKVESEKSSASILPRTNGHQSKLPILAGLALLSLTVAKRKK
                     DFLG"
     gene            501..1358
                     /locus_tag="U1041_001585"
     CDS             501..1358
                     /locus_tag="U1041_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM4768689.1"
                     /translation="MKLKKLFSLAAAALSVGVLAACGSSSSSSSSDSSATTVRVGVMS
                     LSDSEQARWDKVQKILGDEVKLEFTQFTDYSQPNKAVAENEVDINAFQHYNFLNNWNQ
                     ENGEDLVAIADTYIAPIRLYSGTADGKNKYTKVEEIPDGAEIAVPNDPTNESRALYLL
                     QAAGLIKVGVSGTELATIADITENKKNLKITELDASQTASSLSSVDAAVVNNTFVLEA
                     GLDYKNALYKEQKDENSKQWYNLIAARSDWEKSEQAAAIKKIIEAYHTDEVKKVIEET
                     SDGMDEPVW"
     gene            1515..2882
                     /locus_tag="U1041_001586"
     CDS             1515..2882
                     /locus_tag="U1041_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEM4768690.1"
                     /translation="MADSKVQLFENDAIIQNYFEKLKVLISKKSIFAQQIGLLDVATY
                     LKDMFEEAGAEVVLDDSYAAPFVMARFEASVPNAKTLIFYNHYDTVPADVDQVWEKGN
                     PFELTISDGYIYGRGVDDDKGHITARLSALKKYQARQNGHLPVNVIFIMEGAEESASV
                     DLDKYLSKYKEHLIGADLLVWEQGHRNSLHQLEIAGGNKGIVTFDLQVKSADLDIHSS
                     YGGVIDSASWYLLSALQSMRAADGQILVDGIYEQVQEPNERELALVEEFALATSQSMT
                     DIYGLTLPTLVEDRREFLKRLYFEPSITIEGLSTGYLGQGVKTIIPAQASAKMEVRLV
                     PGLEPHDVLDKIRQHLDKHGFDKVEVVFTLGEMSYRSDMSHPAIVNVIELAQKLTPEG
                     VAVLPTSPGTGPMHTVFHALGVPIAGFGLGNANSRDHAGDENVSIADYYSHVELVEEL
                     IASYE"
     gene            2875..3939
                     /locus_tag="U1041_001587"
     CDS             2875..3939
                     /locus_tag="U1041_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEM4768691.1"
                     /translation="MSKEMIKLDNIDVTFQQKKRTIEAVKDVTIHINQGDIYGIVGYS
                     GAGKSTLVRVINLLQVPSAGKITIDEDVIYEGEKVTLTPAQLRSKRREIGMIFQHFNL
                     MAQMTAEENVAFALKHSGLSKEEKKEKVAKLLDLVGLSDRAENYPAQLSGGQKQRVAI
                     ARALANDPKILISDESTSALDPKTTKQILALLQELNEKLGLTIVMITHEMQIVKDICN
                     RVAVMQDGRLIEEGSVLEIFSHPKEELTQDFIKTATGIDEALVKIYQQDIVKNLPENS
                     ILVQLKYAGSNTDTAIVNDLYKFYQVSANILYGNIEILDHTPVGEMVVILSGEPGQLH
                     RAIEAVTEARVEVTILKGAN"
     gene            3940..4632
                     /locus_tag="U1041_001588"
     CDS             3940..4632
                     /locus_tag="U1041_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768692.1"
                     /translation="MLEWIQTNFPDIYKLGWDGQTGWLTHFNLTLYMTFVSFAFGGFL
                     GLVSGLFLVLTGPRGVIANKPAYWILDKVASIFRAIPFIILLAAIAPLTKIIVGKTIG
                     TEAALVPLALSVFPFFARQVEVVLSELDRGVIEAAQASGATFWDIVLVYLREGLPDLI
                     RVTTFALVSLVGYTAMAGAIGAGGLGQVALSYGYLRYNNDVTFLATLLILVIIFVIQF
                     IGDFLTRKISHR"
     gene            4813..5517
                     /locus_tag="U1041_001589"
     CDS             4813..5517
                     /locus_tag="U1041_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B3/4 domain-containing protein"
                     /protein_id="HEM4768693.1"
                     /translation="MSQFIIDSSFWNLFPDAKIGVLLLKDYKTPAQSPDELVKLLEES
                     NGIAQKFLTEDTFSENEVIRTYRQAYQKFKTKKGARSSIEALLKRSTSDRPVTTISPL
                     VDIYNAASLRFGLPCGAEDLDTFVGNLQLTVTEGGDEFYLIGDETNNPTLPGEVCYKD
                     DKGAVCRCFNWRDGERTMITDETKNAFLVMELVNSDRVEDLENALDFISQQAEKFLGV
                     VPEKYLLDCDRPAIAL"
     gene            5826..6587
                     /locus_tag="U1041_001590"
     CDS             5826..6587
                     /locus_tag="U1041_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEM4768694.1"
                     /translation="MKNFYLVDSQEQLFNYQQFVSKYEAKWHDYIHFLRKEYQVRDLP
                     QALIWANEEAARKLLGQSPVPAYTNDIRMVMTPDLAVWKKIYQHQLDSYKNSPDLQTL
                     SAHYKGLSENHLLQIIGHELAHWSDLFLDDFADYDANIWFEEGMVEYISRQYFLTEEE
                     FAQERFCNQLLVDLFQEKHGWHSLDAFGKSTYEGDYASIFYEYWRSFLTIDQLIEKVG
                     SVQALFETYHKWAQSDQSISLLNWFVQEELLEKEI"
     gene            6607..7524
                     /gene="glyQ"
                     /locus_tag="U1041_001591"
     CDS             6607..7524
                     /gene="glyQ"
                     /locus_tag="U1041_001591"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018163989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEM4768695.1"
                     /translation="MAKKLTFQEIILTLQQFWNEQGCLLMQAYDTEKGAGTMSPYTFL
                     RAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLER
                     LGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAE
                     VTYGLERLASYIQEVDSVYDIEWADGVKYGEIFIQPEYEHSKYSFEVSDQDMLLENFT
                     KFEKEAERALEEGLVHPAFDYVLKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVA
                     KTFVAERKKLGFPLLDEATRAELLKEDAE"
     gene            7524..9560
                     /locus_tag="U1041_001592"
     CDS             7524..9560
                     /locus_tag="U1041_001592"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEM4768696.1"
                     /translation="MTKNLLVELGLEEIPAYIVTPAMHQLRDRMATFLTDNRLAFDSI
                     DVFSTPRRLAVRVRGLADQQTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGLTTA
                     DIEFREIKGEEYVYVTKHESGQPAKAVLAGIPEVLKAMTFPVSMNWASNKFAYIRPVH
                     TLTVLLDAEALDMDFLDISSARISRGHRFLGNETEIASADSYEADLRAQFVITDPAER
                     QNMIVEQIKAIEDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTS
                     MKNHQRYFVVRDKSGKLLPNFISVRNGNDQYLDNVIKGNEKVLVARLEDGEFFWREDQ
                     KLKIADLVERLKVVTFHEKIGSLYEHMERTKVIAEKLADLAGLSADEKADVARAADIY
                     KFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGELPESKVGAV
                     LALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQLIAELYS
                     LNFASLTYDNQPAVMDFIRARVEKMMDKAIPKDIREAVLASSTFVVRLQLAASSAIFQ
                     KSKEADYKEAVENLSRVFNLAEKAEATAIDEALFENEQEKALAAAVAGLELTEDMAGN
                     LDKLFALSPVIAAFFDNTMVMVDDAAVKANRLALLKALADKASAVAVFNLLNSK"
     gene            9570..9827
                     /locus_tag="U1041_001593"
     CDS             9570..9827
                     /locus_tag="U1041_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 family protein"
                     /protein_id="HEM4768697.1"
                     /translation="MEQAKIDRINELAKKKKAGTLTPEEKVEQAQLREEYIEGYRRAI
                     RHHIEGIKLVDEDGNDVTPEKLRQVQREKGLHGRSLNDPNS"
     gene            9964..10335
                     /locus_tag="U1041_001594"
     CDS             9964..10335
                     /locus_tag="U1041_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768698.1"
                     /translation="MKKLLYFLLFLTYIACAYSTIFFLPFMYFSGIVEATGVGLGLSY
                     SLHQEVKKHPEKQLSEYLPWGSKRDKIMVVTILLFSILVSFIPDVNWHRGLAILLGIS
                     YVLLWQAMLIQFLRKYYFKNA"
     gene            complement(10357..11694)
                     /locus_tag="U1041_001595"
     CDS             complement(10357..11694)
                     /locus_tag="U1041_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4768699.1"
                     /translation="MNDLTKGKPIAVILQFAIPLLIGSFFQLAYNFADSMIVGHTLGK
                     DAFASVGSTASLIFLIIGFAQGVTNGLTIISAQRFGAGDLEGLKKSFVHGLFYASLIS
                     LLLTVSALAFLKPILVLMQTPVSIIDHSHAFLTAMFGGLTFTIFYNFLSSALRSLGNS
                     KTPLIALIIACFINIGLDFFFILVMNWGVFGAGFATILAQACSVVFLIFYIIHKVPHY
                     HIGLADLKLDRGNLKKHAQLAFPMGFQASIIAIGAMTLQFMVNQLGTDAIAAQAIALR
                     TDQLAMLPMVNLGLAIATFTAQNYGAKLYDRIREGVRHSLLLSIAWAIVFAVILILSN
                     RFFSGLFLPNASQTVLDLALVYYIINGSCYWIVASLFILRSFIQGLGKGFIPTLAGFG
                     ELIFRAIVAVLGMQYFGFYGTAAANPAAWIGSIIVLIPSSIIFMKKLKAGQSI"
BASE COUNT         3454 a         2266 c         2810 g         3276 t
ORIGIN      
        1 tcaacagaag tcgaaccgct agtcatagaa acacctgttg cactaatcaa aggagtatca
       61 gcagttactg aatcttcaag taccctaact aatctagtat atccagttat cgaagtatcg
      121 acccaattga cattgggaaa tactaataac gaggctttat attcagcaac taccgtttcg
      181 agacagaaag tagaatctga aaaatcatcg gcctctatct tacctagaac aaatggacat
      241 cagtccaagc taccaatttt ggcgggactc gcacttctta gcttaactgt agctaaaagg
      301 aaaaaagatt tcttaggcta gcaagctggg aaaatattac gaaagaggga aatagcttcc
      361 ctctttttat tatcaatact tatagttgca agggtatttg ttataacgaa aagttataac
      421 tttctataaa aaaagtcaat tagtcagaaa gaacattctg tgttaagata gatacagttc
      481 taatttaagg agatcatttt atgaaattaa aaaaattgtt tagtttagca gcggctgcct
      541 tgtcagtagg tgtacttgct gcatgtggta gctcgtcttc tagctcttca tccgattctt
      601 cagcaacaac tgttcgtgtg ggtgtgatga gtttgagcga ttctgagcaa gctcgttggg
      661 ataaagttca aaaaattctt ggtgatgaag tgaagttgga attcactcaa tttacagact
      721 attcacaacc aaacaaggca gtagctgaaa atgaggtaga catcaacgcc ttccagcact
      781 acaacttctt gaacaactgg aatcaagaaa atggtgagga tttggttgct attgcggata
      841 cttatatcgc accaatccgt ctttactcag gtacagctga tggaaaaaac aagtacacta
      901 aagtggaaga aattccagat ggtgcagaaa ttgcggttcc aaacgaccca acaaacgaaa
      961 gccgtgccct ttaccttctt caagcagctg gtttgatcaa ggttggtgta tctggtacag
     1021 aattggcaac tattgctgat attactgaaa acaagaaaaa cttgaaaatc actgaattgg
     1081 atgcaagcca aacagcaagc tcacttagct cagttgatgc agcagttgta aacaacacat
     1141 ttgtgttgga agctggtttg gattacaaga acgctcttta taaagaacaa aaagatgaaa
     1201 attcaaaaca gtggtacaac ttgattgcag ctcgtagcga ttgggaaaaa tcagagcaag
     1261 cagcagcgat taagaaaatt atcgaagcct accacacgga tgaagtgaaa aaagttattg
     1321 aagagacttc agacggtatg gatgagccag tttggtaaaa tgtaaatagg ttgaggactg
     1381 ggcagaattg ttcagccctc tatctgtttt tatagagata agaaaaaatc tcttaaccaa
     1441 agtcagaaat gcgggagaat atttgatttt ggttagtaga tttaattggt tttcattgag
     1501 tatgaggaga aagtatggca gatagtaaag ttcaattatt tgaaaatgat gcgattattc
     1561 aaaactattt tgaaaagttg aaggtcttga tttcaaagaa atctattttt gctcagcaga
     1621 ttggtttgtt ggatgtggcg acttatttga aagatatgtt tgaagaagct ggtgcagagg
     1681 ttgttttgga tgatagctat gctgcgccat ttgttatggc taggtttgag gcaagtgttc
     1741 caaatgctaa gaccttgatt ttttacaatc actatgacac ggttcctgct gatgtcgatc
     1801 aggtctggga gaagggcaac cccttcgaat tgaccatttc cgatggctat atctatggtc
     1861 gcggggtgga cgatgacaag ggccatatca cagctcgtct gtcggccttg aaaaaatatc
     1921 aggctagaca gaatggccat ttaccagtca atgtgatttt tattatggaa ggggcagaag
     1981 agtcagcctc tgtcgacttg gataagtatc tttcaaaata caaagaacac ttgattggtg
     2041 ctgatttact ggtctgggag caggggcatc gcaatagcct acatcagcta gaaattgctg
     2101 ggggaaataa aggaattgtg accttcgatc ttcaggttaa atcagctgat ttggatattc
     2161 attcttccta tggtggtgtc attgattcgg caagctggta tttattatca gctcttcaat
     2221 ccatgagagc ggctgatggg caaattctgg tagatggtat ttacgaacaa gtgcaagagc
     2281 caaatgagcg tgaattggcc ttagtggaag aatttgcact ggctaccagt cagtctatga
     2341 cggatattta tggactaacc cttccaacct tggtagaaga tcgtcgtgaa tttctgaagc
     2401 gtctgtattt tgagccatct attaccattg aaggcttgtc aactggctat cttggtcaag
     2461 gtgttaagac cattattcca gctcaggctt ctgctaagat ggaagttcgt ctggtacctg
     2521 ggttggagcc gcatgatgta ttagataaga ttcgccagca tttggacaaa catggttttg
     2581 acaaagttga ggttgtcttc actctaggag agatgagtta ccgaagtgat atgtcccacc
     2641 ctgccattgt caatgtgatt gaattggccc aaaaattgac accagaagga gttgctgtct
     2701 tgccgacgtc accggggaca ggccccatgc atacagtttt ccatgccttg ggcgtgccga
     2761 ttgcaggatt tggtctagga aatgccaaca gtcgtgacca tgccggtgat gaaaatgtca
     2821 gcatcgctga ctactatagc catgttgaat tagtagagga gttaattgca agttatgagt
     2881 aaggaaatga ttaagctaga taatattgat gtaactttcc agcagaaaaa acggaccatc
     2941 gaggcggtaa aagatgtcac catccatatc aatcaagggg atatttacgg tatcgtaggg
     3001 tattctggag ctggtaaatc tacccttgtc cgcgtcatca atttgttgca ggttccgtct
     3061 gcgggtaaaa ttactattga tgaggatgta atttacgagg gagaaaaggt cacacttacc
     3121 ccagctcaat tgcgaagcaa acgccgtgaa atcggcatga ttttccagca tttcaatctg
     3181 atggctcaga tgacggcaga agaaaacgta gcctttgccc ttaagcattc gggtttgagc
     3241 aaggaagaga agaaagaaaa agttgctaag ttgttggact tggttgggct ttctgaccgt
     3301 gctgaaaact atccagctca gttgtctggt ggtcaaaaac aacgtgttgc cattgcccgt
     3361 gccttagcaa atgaccctaa aatcttgatt tctgatgagt ctacttcagc cttggatccg
     3421 aaaacaacta agcagatttt ggcactcttg caggaattga atgaaaaatt gggcttgacc
     3481 attgttatga ttacccacga gatgcagatt gtaaaagaca tttgtaaccg tgtggctgtt
     3541 atgcaggatg gtcgcttgat cgaagaaggt tcagttttag aaatcttctc tcatccaaag
     3601 gaagaattga cacaggattt catcaaaaca gcaacaggaa ttgatgaggc cttggtgaaa
     3661 atttaccagc aggatattgt taagaatttg cctgagaaca gtatcttagt tcaattgaaa
     3721 tatgccggtt caaatacgga tacggcgatt gtgaatgact tgtataaatt ctatcaagta
     3781 tctgccaata ttctttatgg caatattgaa atattggacc atacaccagt cggtgagatg
     3841 gtagtgatct tatcaggaga acctggtcag ttgcaccgtg cgattgaggc ggtgacggag
     3901 gcgcgtgtgg aagtgacgat tttgaaagga gcaaattaga tgttagaatg gattcaaacg
     3961 aattttccag atatttataa attgggctgg gatggtcaga caggttggtt aacacatttt
     4021 aatttgaccc tctatatgac ctttgtttcc tttgctttcg gtggtttttt gggcttggtg
     4081 tctggtttgt tcttggtttt gacaggtcca cgtggagtta tcgccaataa gcctgcctac
     4141 tggattttgg ataaggtagc ttcgattttc cgtgccattc ctttcattat tttgttggcg
     4201 gccattgctc ctttgacgaa aattattgtt ggaaaaacca ttggtacaga ggcagctttg
     4261 gtgccgctcg ccctttcagt ctttccgttt tttgcccgtc aggttgaagt agtcctgtca
     4321 gaattggacc gtggtgtcat tgaggctgct caggcatcag gtgcgacttt ctgggatatt
     4381 gtccttgtct atctgcgtga gggtctgcct gacttaattc gtgtgacaac ttttgctttg
     4441 gtttcattgg tgggctacac tgccatggca ggggctatcg gagcaggtgg tttgggacag
     4501 gttgcgctat catacggcta cctacggtat aataatgatg tgaccttttt agcaactctt
     4561 ttgattttag ttatcatctt cgtaatccag tttattggtg atttcttgac caggaagatt
     4621 agtcatagat agttatttag ctgtgttttt caaattttgg atagtccttg acttatttaa
     4681 agcattttta tacaataaat ttaattaaat aaacactgcc accgggtagt catgcaacag
     4741 cattttatga acatcgatag gtcttagaag atgttcatag ggtgctgatt tttctataaa
     4801 aggagttgga atatgtcaca atttattatt gattcatctt tttggaattt atttccagat
     4861 gcaaaaattg gagttctatt attgaaagat tataaaacgc cggcgcaatc gcctgatgaa
     4921 ttagtgaaat tactggaaga aagcaacgga attgctcaga aatttcttac ggaagatacc
     4981 tttagtgaga atgaggtcat tcgtacatat cgtcaagcct atcaaaaatt taaaacaaaa
     5041 aaaggcgcgc gttctagtat cgaagccctt ttgaaacgtt caactagtga ccgtccagtc
     5101 acaacaattt ctccattagt ggacatttat aatgcggcga gtttacgttt tggtcttcca
     5161 tgtggtgctg aagatttaga tacatttgta ggtaatcttc aactaacggt cactgagggt
     5221 ggagatgagt tttatctgat tggtgatgaa accaataacc caactctacc aggtgaagtt
     5281 tgctataagg atgataaagg tgccgtttgt cgctgtttca attggcgtga tggtgagcga
     5341 accatgatta cggatgagac aaagaatgct ttcttggtca tggagttggt caattctgat
     5401 agagtagaag atttggaaaa tgccctagat tttatcagtc aacaggcaga aaaattcttg
     5461 ggagtagtac cagaaaaata tctattagat tgcgataggc ctgcaatagc cttgtaggat
     5521 ttgtcagtga gattgtgttc ggatagatag tggtctttct agacaaatgc tgaattttct
     5581 gctacaatac taagcatgaa agaaggttgt ttcaaaagcc tgtctagcga gcttgggaga
     5641 gtgaaagcca agccagtctt gaaataattg gcactttcct agtcgtgacc atatctgact
     5701 caaacaaaat catacaaatg aagtaataaa ttagggtgga accgcgttct caacgcccct
     5761 atgtctgcgg acaggggaag agaatgtggt tctttttctg ttttaccaga gatgaaagag
     5821 agaatatgaa gaatttttat ctagtagata gccaagaaca gctgtttaac tatcagcaat
     5881 ttgtctcaaa atacgaggca aaatggcatg actatatcca ttttctaagg aaggaatatc
     5941 aagttcgtga tttgccccaa gcccttatct gggcaaatga agaagccgca agaaaattac
     6001 ttggccaaag tcccgtacca gcctacacta atgatatccg catggtcatg acaccagact
     6061 tagcagtttg gaaaaagatt taccagcatc aactagatag ctacaagaac agcccagact
     6121 tgcagacatt gagtgctcac tacaaaggtt tgtcggaaaa tcatctgttg caaattatcg
     6181 gtcatgagct ggcgcattgg tcagaccttt ttctggatga ctttgcggac tatgatgcaa
     6241 acatctggtt tgaagagggt atggtcgagt acatcagcag acagtatttt ttgacagaag
     6301 aagagtttgc tcaagagcgg ttctgtaatc agctcttggt tgacctcttt caagaaaaac
     6361 acggctggca ttccttggat gcttttggaa aatccactta cgaaggagat tacgcgagta
     6421 ttttttacga gtactggcga agttttctca ccattgacca gttaatagag aaagtaggtt
     6481 cggtccaagc actttttgaa acctatcata aatgggcgca gtcagaccaa agtatttcgc
     6541 tactcaactg gtttgtgcag gaagaattat tagaaaaaga aatttaaaaa gaaacaggag
     6601 taacttatgg caaaaaaact tacatttcag gaaatcatcc tgaccttaca acaattttgg
     6661 aatgagcagg ggtgtctgct catgcaggct tatgatacgg aaaaaggggc ggggactatg
     6721 agtccctaca ctttcttgcg tgctatcggt cctgagcctt ggaatgcggc ttatgtggag
     6781 ccttctcgtc gtcctgcgga cggtcgttac ggggaaaacc caaaccgtct ctatcagcac
     6841 caccaattcc aagtggtgat gaaaccatct ccatctaata tccaagaact ctacttggaa
     6901 tctttggagc gtttgggcat caatcctttg gagcatgata ttcgttttgt tgaggacaac
     6961 tgggaaaacc cgtcaacagg atcagctggt ctaggctggg aagtttggtt ggacggtatg
     7021 gaaatcacgc agtttaccta tttccaacag gttggtggtt tggcaacagg ccctgtcaca
     7081 gccgaagtaa cctacggttt ggagcgtttg gcatcctata tccaagaagt tgactccgtt
     7141 tacgacatcg agtgggcaga cggtgtcaaa tacggcgaaa tcttcatcca gccagagtat
     7201 gagcattcaa aatattcctt tgaagtatcc gaccaagaca tgctccttga aaactttacc
     7261 aagtttgaga aagaagcaga gcgggctttg gaagagggct tggttcaccc agcatttgac
     7321 tatgtactca aatgctctca cacctttaac ttgttggatg cccgcggagc tgtgtctgta
     7381 accgagcgtg caggctacat tgcccgtatc cgtaaccttg cccgtgtcgt tgccaagacc
     7441 tttgtggcag agcggaaaaa actcggtttc ccacttttgg atgaagcaac acgagcagaa
     7501 ttgttgaagg aggatgcaga ataatgacaa agaatttact tgttgaactt ggcttggaag
     7561 aaatccctgc ctacatcgta accccagcca tgcaccagtt gcgtgaccgc atggcgactt
     7621 ttttgacaga caaccgcttg gcttttgaca gcattgatgt cttttcaaca ccacgccgtt
     7681 tggctgttcg tgtccgtggt ttagcagacc agcagactga tcttacagaa gatttcaagg
     7741 gtcctgcgaa gaagattgcc ttggatgcag acggaaactt cactaaagct gcagaaggct
     7801 ttgtccgtgg taaaggcttg acgacagctg acatcgagtt tcgcgagatc aagggcgaag
     7861 agtatgttta tgtgaccaaa cacgaatctg gtcagccagc taaggcagtc ttggcgggca
     7921 ttccagaggt cttgaaggct atgaccttcc ctgtcagcat gaactgggcg tccaacaaat
     7981 tcgcctacat ccgccctgtt cacaccttga ccgttctctt ggatgccgag gcattggata
     8041 tggacttctt ggacatttca tccgctcgca tcagccgtgg tcatcgtttc cttggaaatg
     8101 aaactgagat tgcaagtgca gattcttacg aggcagactt gcgtgcacag tttgtcatta
     8161 cagatcccgc agagcgtcaa aatatgatcg tcgagcaaat caaggctatc gaggacaaac
     8221 acaacgtgac agttgagatt gatgaagatc tgctcaatga agttctcaac ctggtcgagt
     8281 acccaactgc ctttatgggc tcctttgaca ccaaatactt ggaagtgcca gaagaagtct
     8341 tggttacttc tatgaaaaac caccaacgtt acttcgtggt gcgggataag tctggcaaac
     8401 tcttgccaaa cttcatctct gtacgaaacg gtaatgacca gtaccttgac aatgtcatca
     8461 aaggaaatga aaaagtcttg gttgcacgtt tggaagacgg cgagttcttc tggcgtgaag
     8521 accaaaaact caagattgct gacttggtgg aacgtttgaa agttgtgacc ttccatgaaa
     8581 aaatcggctc actttacgag cacatggaac gcaccaaggt tatcgcagaa aaactggctg
     8641 acttggcagg cttgtctgcg gatgaaaaag cagatgtggc acgtgcggca gacatctata
     8701 agtttgacct cttgacagga atggtcggcg agtttgatga attgcaaggg attatgggtg
     8761 agaagtatgc ccttcttgca ggggaaaaac ctgcggtggc ggcagcaatc cgtgagcact
     8821 acttgccaaa ctcagcagaa ggcgaattgc ctgagagcaa ggtcggtgcg gtcttggcac
     8881 tggctgataa atttgatacc cttctatcct tcttctctgt tggtttgatt ccttctggct
     8941 caaacgaccc ttacgctctt cgtcgtgcga cacagggtat cgtgcggatt ttggaagcct
     9001 ttggctggga aattccattg gatcagttga ttgcggagtt gtacagcttg aactttgcca
     9061 gcttgactta tgacaaccag ccagctgtga tggactttat ccgtgcccgt gtagagaaga
     9121 tgatggataa ggccattccg aaagacatcc gcgaggctgt actggctagc tcaacctttg
     9181 tggtcagact gcaactggca gccagctctg ctattttcca aaaatcaaaa gaggctgact
     9241 acaaggaagc cgtggaaaac ttgtcacggg tcttcaactt ggctgaaaag gcggaggcga
     9301 ctgcgattga cgaggccctc ttcgaaaacg agcaggagaa ggcacttgct gctgcagtgg
     9361 caggcttgga gttgacagaa gacatggcag gcaacttgga caagctcttt gctctcagcc
     9421 cagtcatcgc ggccttcttc gacaatacca tggttatggt agatgacgca gcagtcaaag
     9481 ccaaccgctt ggctctcttg aaagccttag cggataaggc aagtgctgtg gcggtcttca
     9541 atctcttgaa tagcaagtag gaggcaaata tggaacaagc aaaaatcgat cgtatcaatg
     9601 aattggctaa aaagaaaaaa gctggtacct tgacaccaga ggaaaaagtt gaacaggctc
     9661 agctcaggga agaatacatc gaggggtatc gtcgagcaat ccgtcatcat attgagggga
     9721 ttaagctggt tgatgaggac ggcaatgatg tgacgccaga gaaactccgt caagtccaac
     9781 gtgaaaaagg cttgcatggc cgtagtttga acgaccctaa ttcctaagaa taaatgataa
     9841 taaacaagga aagactaggt ttcctagtct ttttttgtgc ttttgagaac atatatttac
     9901 ttgttcattc gattcataaa tgataaaatg tatatagata aataggctta ggagggcttt
     9961 gtcatgaaaa aactactcta ttttctcttg tttcttacct acatcgcatg tgcatacagc
    10021 acgattttct ttctgccttt tatgtacttt tctggaattg ttgaggcaac aggagttggt
    10081 ctgggcctaa gctattccct acatcaagaa gtcaaaaagc atcctgaaaa acaattgtca
    10141 gagtatttac cgtggggatc taagagggac aagattatgg tagtaaccat tctacttttc
    10201 tccattttgg tcagtttcat tccagatgtg aattggcata gaggcctggc aatcctctta
    10261 ggtatcagct atgtactcct ttggcaagct atgcttatcc aattcctacg aaaatattat
    10321 tttaaaaacg catgagagtt tcatgcgttt tcttttctaa atactttgtc cagcttttaa
    10381 ttttttcata aagatgatgg aacttggaat caggacgatg atgcttccga tccaggcggc
    10441 ggggttagcg gcggcggttc catagaagcc gaaatactgc atgcccagaa cggctacgat
    10501 agcacggaaa atcaattctc caaagcctgc tagtgttggg ataaagcctt tgccaagtcc
    10561 ctgaataaag ctacgaagaa taaagaggga agcaacaatc cagtaacaag agccgttaat
    10621 gatgtagtaa acaagagcca agtccagcac tgtttgactg gcatttggca gaaagagacc
    10681 agagaagaag cgattgctca agatgagaat gaccgcaaat acaatggccc aagcaatgct
    10741 gaggagtaaa gagtggcgca ctccttctcg aatacggtca tagagcttgg caccgtagtt
    10801 ctgagcagta aaggttgcga tagccaagcc cagattgacc atgggcagca tagccaactg
    10861 gtcagtacga agggcaatgg cctgggcggc gatggcgtct gttcctagtt ggttaaccat
    10921 aaactgcaag gtcatagctc cgatggcgat aatactggct tgaaatccca ttggaaaagc
    10981 aagttgggca tgtttcttga gattacctct atccaatttt aaatcagcta gtccgatatg
    11041 atagtgaggt accttgtgga taatgtaaaa aataagaaag acgaccgaac aggcttgagc
    11101 aaggatagtt gcaaagccag ctccgaaaac gccccagttc ataactaaga taaagaaaaa
    11161 atccagaccg atattgataa aacaagcgat gattagggca atcagaggtg ttttagagtt
    11221 tccgagactg cgtagggctg aggacagaaa attataaaaa atagtaaagg tcaatcctcc
    11281 aaacatggcc gttagaaagg catgggagtg gtcgatgata ctcacaggcg tttgcattaa
    11341 gaccaagata ggtttcaaaa aagctaaggc tgagactgtt agtaaaaggc tgatgaggga
    11401 agcgtagaag agtccgtgga caaaagattt tttaagcccc tctaagtcgc cagctccaaa
    11461 gcgttgggca gaaataatgg ttaatccatt ggtaacacct tgagcaaaac cgatgattaa
    11521 aaaaattagg ctggcagttg agccgacact tgcaaaggca tcctttccca aagtatgccc
    11581 cacaatcatg gaatcagcaa aattataggc cagttgaaaa aaagatccaa tcaacaaggg
    11641 gatagcgaat tgtaagatga ccgcaatcgg ctttcctttg gttaaatcat tcataacgtc
    11701 tccttttgac agatgataag cccactagat agatgatagt ctagtaggct ttctagggat
    11761 aaaatatttc tcctgaaaac ggagtatagg acgtaaattt gttatt
//
LOCUS       DASFQS010000069        11762 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.071, whole genome shotgun sequence.
ACCESSION   DASFQS010000069 DASFQS010000000
VERSION     DASFQS010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11762
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.071"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            110..586
                     /locus_tag="U1041_001596"
     CDS             110..586
                     /locus_tag="U1041_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3955 domain-containing protein"
                     /protein_id="HEM4768700.1"
                     /translation="MNFGQQIKDLRKKKGLTQEQFALKLNVTRQAVSNWENDKNLPDL
                     ELLILMSSVFSISLDHLILGGTDMNNMTEKLVKDGREGRRTQMHLTITIIGSFLMLLG
                     FVCFIIKANSVEYVDAKGILHENFYLIPVGYLLVFTGAIATLLSGLALHRFRKENK"
     gene            588..1415
                     /locus_tag="U1041_001597"
     CDS             588..1415
                     /locus_tag="U1041_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEM4768701.1"
                     /translation="MTKHPRFLNSDQFFACPHCGQALGLDLNSLRCPNRHTFDIAKQG
                     YVNLAPQVKQSANYHKSSFENRQAFLEAGYYDHLYEALEGKIAELGLQSVLDIGCGEG
                     FYSRKLAEKMDLDILAFDISKDSILLAAKSDRTKSVKWFVGDLTKLPIQDKTIDGILD
                     IFSPANYQEFARVLKTGGAILKLVPGPNHLKELRHLAKDQLRKESYDNQAIVDHFKSY
                     VGQVEQVLVSRTLPITAAHAQVLADMTPLFFQVDQSKLDLSQLTEITVEAVLLVGTI"
     gene            complement(1715..2503)
                     /locus_tag="U1041_001598"
     CDS             complement(1715..2503)
                     /locus_tag="U1041_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEM4768702.1"
                     /translation="MVYTSLKSPEKDYTYDLHIAHLYGDLMNTYGDNGNILMLKYVAE
                     KLGARVQVDIVSLTDEFDKNFYDIAFFGGGQDYEQSILAKDLPTKKDSLADFIENDGV
                     MLAICGGFQLLGQYYIEAGGRKIDGLGIMGHYTLNQTNNRYIGDIKIHNDEFNETYYG
                     FENHQGRTFLADNQKPLGKVVYGNGNNKEDGGEGLHYKNTFGSYFHGPILSRNANLAY
                     RLVTTALRKKYGQDIQLASYADILSKEVAEEYGDVKSKAEFDTQ"
     gene            complement(2503..3846)
                     /locus_tag="U1041_001599"
     CDS             complement(2503..3846)
                     /locus_tag="U1041_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEM4768703.1"
                     /translation="MKINTALGILAGKSSQFILKKLGRGTTLPGKIALKFDKHILDSL
                     AKDYEVVVITGTNGKTLTTALTVGILQEAFGEITTNTSGANMITGITATFLSAKKNKN
                     GKKIAVLEIDEASLARVTDFIKPSLIVFTNIFRDQMDRYGEIYTTYQMILDGAAKAPQ
                     ATILANGDSPLFNSTNVINPVKYYGFATEEHEPRLAHYNTEGVLCPHCHQIIQYKLNT
                     YANLGSYICTNCGFCRPELDYKLTDLKEITNTSSTFAIDGQDYKINIGGLYNIYNALA
                     AVSVAEFFGVSPEKIKAGFDKSKAVFGRQETFKLGDKDCTLVLIKNPVGATQAIEMMK
                     LAPYDFSLSVLLNANYADGIDTSWIWDADFEQITQMDIPQVFAGGVRSSEIARRLRVA
                     GYPEDQITETPKLEDIMTLIEQSSSQHAYILATYTAMLEFRDLLAQRQAVGKEMK"
     gene            4026..4880
                     /locus_tag="U1041_001600"
     CDS             4026..4880
                     /locus_tag="U1041_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00159 family protein"
                     /protein_id="HEM4768704.1"
                     /translation="MLNLNQLLDTGYWSSLIASPWTALLHLIDISIVVYLIYNFSKSI
                     AGTKIMTLIRGVFLFIIVQIIASLFGLQTIAWLINQVITYGVIAAVVIFAPELRAMLE
                     KLGRTTQIFGTNTVSAEEKLIVAFLKSVAYMSPRKIGALVAVEQAQTLQEYRATGIPL
                     NADISQELLINIFIPNTPLHDGAVIVKEDKVAVACAYLPLSESAGISKEFGTRHRAAI
                     GLSEVSDAFVFIVSEETGSISIARNGIFKHDLTLDEFEAELRATFISENVEKKSIWKR
                     LGGGKHER"
     gene            4870..5574
                     /locus_tag="U1041_001601"
     CDS             4870..5574
                     /locus_tag="U1041_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768705.1"
                     /translation="MNDKFKAVGHLALSIFLALLLFFYATTTNYKNSETAAQNTESET
                     YVHTLSNVPIEIEYDTNKYFISGFSSTIAVELRGSNRVLLQRESDESTRTFQVTADLR
                     ELSDGTQTVKLQLTNLPAGVSATLAPDAITVKIGKKVSKAFPVAGRVYSNQLAEGYSL
                     SKVSVNVDTVKVTTDEETMAKIDQVEAVAMDVSNLSENYSGTAKLQAVDSDGNVLPVV
                     LSQTEANMQIILTKTK"
     gene            5586..6938
                     /locus_tag="U1041_001602"
     CDS             5586..6938
                     /locus_tag="U1041_001602"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007517007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEM4768706.1"
                     /translation="MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETDVPRV
                     FVARDTRISGQMLEAALIAGLLSVGIHVYKLGVLATPGVAHLVKTEKASAGVMISASH
                     NPAQDNGIKFFAGDGFKLDDALEAEIEALLDAEEDTLPRPSAHGLGDVVDYPEGLRKY
                     ESFLVSTGIQLEGMKVALDTANGAASTSARQIFADLGADLTVMAEHPDGLNINEGVGS
                     THPEKLQELVKETGSQIGLAFDGDSDRLIAVDENGDLVDGDRIMYIVGKYLADRGLLA
                     KNTIVTTVMSNLGFHKALDREGIEKAVTAVGDRYVVEEMRKEGYNVGGEQSGHVILMD
                     YNTTGDGQLTAVQLTKIMKETGKKLSELAAEVTIYPQKLVNIRVENSMKDKAMEVPAI
                     AAIIEKMEAEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRAEIGLD
                     "
     gene            6988..8532
                     /locus_tag="U1041_001603"
     CDS             6988..8532
                     /locus_tag="U1041_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000025412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4768707.1"
                     /translation="MSILEVKNLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKST
                     FMSIVTGQLQPDEGKVEWSRYVTAGYLDQHAKLEKGQSVRDVLRTAFDELFKTEARIN
                     DIYMSMAEEGADMDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDYGMDKDVT
                     ELSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDI
                     PFLNDVINIVYHVENQLLTRYTGDYYQFQEVHAMKRAQLEAAYERQQKEIADLQDFVN
                     RNKARVATRNMAMSRQKKLDKMEIIELQAEKPKPSFDFKMARTPSRFIFQTTDLEIGY
                     DRVLTRKPLNLTFERNQKIAIVGANGIGKSTLLKSLLGIIPPLGGSVERGEYLELGYF
                     EQEVAGGNRQTPLEAVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVR
                     FCLLMNRENNVLVLDEPTNHLDVDAKDELKRALQAYKGSILMVCHEPDFYQGWVDDVW
                     DFNELT"
     gene            8694..9899
                     /gene="sstT"
                     /locus_tag="U1041_001604"
     CDS             8694..9899
                     /gene="sstT"
                     /locus_tag="U1041_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEM4768708.1"
                     /translation="MNKIISVWKKMNLIRKIGIGVILGVLLGLIAPKIAVIALFGSLF
                     VGALKAIAPLLVLTLVAHALSQAPAGQKSNMRTVICLYLFGTFAAAFIAVGASYLFPI
                     KLVLSTTTTTDITPPQGIAEVFQDLLLKIVDNPINALATANYIGVLTWAAVFGLAFRN
                     ASQHTKDLLQSTAEVTSKVVSWIIGLAPFGILGLVFDTIANNGLAALKNYGALLLVLV
                     GCMAFVALVVNPLIAFLVMKKNPYPLVFECLRVSGVTAFFTRSSAANIPVNMQLCKRL
                     GVDPDTYSVSIPLGATINMAGAAITINILTMAAVHTLGISVDFSSALLLSVVASLSAA
                     GASGVAGGSLLLIPVACSLFGIPNELAMQVVGVGFVVGVIQDSCETALNSSTDVLFTV
                     VAERSAWKK"
     gene            10326..11726
                     /gene="pepV"
                     /locus_tag="U1041_001605"
     CDS             10326..11726
                     /gene="pepV"
                     /locus_tag="U1041_001605"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepV"
                     /protein_id="HEM4768709.1"
                     /translation="MTVNFRAEFDKRKDEFLADLFDLLRINSERDDSQADAQHPFGPG
                     PVRALDKFLEIAQRDGYPTKNVDNYAGHFEFGEGDEVLGIFGHLDVVPAGSGWNTDPY
                     EPQIIDGKLFARGSSDDKGPTMACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMD
                     YYFEHVGLPLPDFGFSPDAEFPIINGEKGNITAYLHFAGENSGAAKLHSFTGGLRENM
                     VPESATAIISGDLADLDSKLADFTAAYGLKADAETLENGQVQVTVIGKSAHGSTPEEG
                     VNGATYLAKFLSQFAFDGAAKAYLDLAGQVLLEDHDAKKLGVAIYDEQMGALSMNAGV
                     FKFDETSSDNTIALNFRYPKNTNPETIKSGLEKLGVEAVSLSEHGHTPHYCPIDDPMV
                     ATLLSVYEKHTGLKGHEQVIGGGTFGRLLKRGVAYGAMFPGDINTMHQANEFIEVEQL
                     YRAATIYAEAIYELIK"
BASE COUNT         3222 a         2463 c         2775 g         3302 t
ORIGIN      
        1 gaaacagtct ggggatagac tgtttcagct caacaactta aaacgaaaaa ttgttgacga
       61 actctttttc atttttcgag ttctgtcccg ctccccgaaa ggagaagaaa tgaactttgg
      121 acagcaaatc aaggacttac gaaaaaagaa aggcctgacc caggagcagt ttgccctcaa
      181 actcaatgtg acacggcagg ccgtttccaa ctgggaaaat gacaaaaatc tacctgattt
      241 ggaactcttg attctcatgt cctctgtctt ttcaatctcc ttagatcacc ttatcttagg
      301 aggaactgac atgaacaaca tgacagaaaa acttgtaaaa gacggtcgcg aaggccgccg
      361 cacccagatg cacctgacca ttaccattat cgggagcttt ctcatgctac tcggcttcgt
      421 ctgctttatc atcaaggcaa actcagtcga atatgtcgat gccaagggca ttctacatga
      481 aaatttttat ctcattccag tcggctactt gctggtcttt acaggagcca ttgccacgct
      541 cctatcagga ctagccctgc accgctttag aaaagaaaat aagtaagatg accaaacacc
      601 cacgtttcct aaatagcgac caattttttg cctgtcccca ttgtgggcag gcccttggtc
      661 ttgacctcaa cagcctccgc tgtcccaacc gccacacctt cgacatcgcc aagcagggct
      721 acgtcaacct ggcaccccag gtcaagcagt ccgccaacta ccacaagtct agctttgaaa
      781 accgccaggc ctttttagag gcgggctatt acgatcatct ctacgaggct ttggagggga
      841 aaatagcaga gctgggcttg cagtcagttt tggacatcgg ctgtggagag ggcttttatt
      901 cccgcaaatt agccgagaaa atggacttgg acattcttgc ttttgatatt tccaaggatt
      961 ccattctcct agcagccaaa tctgacagga ccaagtcggt caaatggttt gtcggtgact
     1021 tgaccaagtt acccattcaa gacaagacca ttgacggtat cttggacatc ttttccccag
     1081 ccaattatca ggagtttgcc agagtgttaa aaactggtgg ggcaattcta aaattagtcc
     1141 caggtccaaa tcacctcaag gagctccgcc atttagccaa agaccaactc cgcaaggagt
     1201 cctatgataa ccaggctatc gtggaccatt tcaagtctta cgtagggcag gtggagcagg
     1261 tgctggttag ccggactttg ccgattacag ccgcccatgc tcaagtcttg gcagatatga
     1321 cgcccctctt tttccaagtg gaccagtcta agttggattt gagccagttg accgagatta
     1381 cggttgaggc agtgcttttg gtaggaacta tataaaaaat gaaaccgcct ctgatttcag
     1441 aagcggtttt gctttatttc tcatactctt cgaaaatcaa agtcagacct tgttgacttg
     1501 atttgatgag tggaaagttc cagcggaggt ttccagccta tcacttgaca ataataaagt
     1561 gacagagttc tatctgcgcc atatagacac gaacgatgtt cgctctattt ccaaccacca
     1621 aaggatcccc aaaccttttg tagcgaactt cgttcgcttt atttccaagc accaaaggtt
     1681 ccccaaacct ttggtgctag tctgattctg attttcattg agtatcaaat tctgccttgc
     1741 ttttcacatc gccgtattct tcagcgactt ctttgctgag gatgtcagcg tagctggcaa
     1801 gttggatgtc ttgtccgtat tttttgcgga gggcagtagt gaccaggcgg taggctaagt
     1861 tggcattgcg ggataagatt ggtccgtgga agtagctgcc gaaggtgttt ttgtaatgca
     1921 ggccttcgcc accgtcttcc ttattgttgc cattaccata gacaaccttg cccagcggtt
     1981 tttggttgtc agctaggaag gtacggcctt ggtggttttc aaaaccgtag taggtttcgt
     2041 tgaattcatc attgtgaatt ttgatgtcac cgatatagcg gttgttagtc tggttgaggg
     2101 tgtagtgtcc catgataccc agcccgtcaa tcttgcgacc gccagcttcg atgtaatatt
     2161 gcccgagcaa ctggaagcca ccgcagatag ccagcatgac gccatcgttt tcgataaagt
     2221 ctgctaggct gtcttttttt gtcggtaaat ccttagcaag aatggattgt tcatagtcct
     2281 gtccaccacc gaaaaaggcg atgtcgtaga aatttttgtc aaattcatct gtcagggaaa
     2341 cgatgtccac ctggacacga gcccccagct tttcagccac atacttaagc atgaggatat
     2401 tgccattgtc cccataggtg ttcatcaaat caccgtagag atgagcgatg tggagatcat
     2461 aagtgtagtc tttttcagga ctttttaatg acgtatagac cattatttca tctcctttcc
     2521 aacggcttgg cgttgagcca gcaggtcgcg gaattcgagc atagctgtat aagtagctaa
     2581 aatataagca tgttggctac tcgattgctc aatcaaggtc atgatgtctt ccagtttagg
     2641 tgtttcagta atctggtctt caggatagcc agccacacgg aggcgacggg cgatttcaga
     2701 tgaacgaaca ccgcctgcaa agacttgtgg aatgtccatt tgagtgattt gttcaaagtc
     2761 agcgtcccaa atccagctgg tatcaattcc gtcagcgtag ttggcattga gaagaacaga
     2821 taggctaaaa tcgtatggag ccagtttcat catttcaatg gcctgggttg caccgacagg
     2881 gtttttaatc aagaccaagg tacaatcctt atcaccgagt ttaaaggttt cttggcgacc
     2941 aaagactgcc ttggatttgt caaatcctgc cttgattttt tcaggagata caccgaaaaa
     3001 ttctgctacg ctgacagctg ctagggcatt gtagatgttg tagaggcctc cgatgttgat
     3061 tttgtaatcc tgaccgtcaa tggcaaaggt agaagaagta ttggtgattt ctttcaagtc
     3121 tgtcaactta tagtccagct ctggtcggca aaagccacag ttggtacaga tgtagctgcc
     3181 caagttagcg taggtattga gcttgtactg gataatctgg tggcaatgtg ggcagagaac
     3241 gccttctgta ttgtaatggg ccaggcgagg ctcatgctct tccgtcgcaa aaccgtagta
     3301 ttttactgga ttgataacgt ttgtcgagtt aaaaagcgga ctatcaccgt tagcgagaat
     3361 ggtcgcctgt ggagccttgg cagccccgtc caaaatcatc tggtaggtgg tataaatctc
     3421 cccgtagcga tccatctgat cacggaagat attggtaaag acaatcaagc taggcttgat
     3481 aaaatcggtc acacgggcca agctagcctc atcaatctcc aagacggcaa tcttcttgcc
     3541 gtttttattt ttcttggcag ataaaaatgt tgccgtaatc cctgtaatca tattggcacc
     3601 gcttgtgttg gtcgtgattt cgccaaaggc ttcttggagg atacctacgg tcaaggctgt
     3661 tgttagagtt ttaccattag ttccagtaat aacaacgact tcataatctt tagccaaact
     3721 atctaaaata tgtttatcga atttgagggc aattttccca ggcagagtag taccacgtcc
     3781 tagttttttc aaaatgaact gggagctttt tcctgctaga atacccaaag ctgtatttat
     3841 tttcatggga ttattttatc ataaaggtca ctgattttct agaatggagt gtgttggaac
     3901 gtgatatatt cctgcagtaa atctgtaata tttttaacag gaaggtcact attttctaaa
     3961 gaaaagggga aaatatggta taatgggtac attactatgt atgagttaga aagtatgaga
     4021 atgatatgtt aaacctaaac cagttactgg atacagggta ttggtcgagt ttgatagcca
     4081 gtccttggac cgcattgttg cacctaattg atattagtat agttgtttat ttgatttata
     4141 attttagtaa gtctattgca ggtactaaaa ttatgacatt gattcgaggg gtttttctct
     4201 tcattattgt ccagattata gcgagtttat tcggtctgca gacgattgct tggctgatta
     4261 atcaagtaat cacgtatggg gttattgcag cagtagttat ttttgcacca gagttgcgtg
     4321 ctatgctgga aaaactcggt aggacaactc agatttttgg gacaaataca gtgagtgcag
     4381 aagaaaagtt aattgttgct tttctcaaat cggttgctta tatgtctccg cgtaaaattg
     4441 gtgcacttgt ggcagtagaa caagcccaaa cattgcaaga atatagagca acggggattc
     4501 cactcaatgc ggatatatcg caggaattgt taataaatat tttcatcccg aatacaccgc
     4561 tacatgatgg ggctgtaatt gtcaaggaag acaaggtagc tgttgcttgt gcttatttgc
     4621 ccctgtcaga gagcgcagga atttcaaagg aatttggaac acgacatcgt gcagccattg
     4681 gcttatcgga ggtatctgat gcgtttgtat ttattgtttc tgaagaaact ggcagtatct
     4741 ctattgcacg aaacgggata tttaaacatg atttgacttt ggatgagttt gaagcagagt
     4801 tgcgagcgac ttttatttct gaaaatgtag agaagaagtc catctggaag cgattaggag
     4861 gtggcaaaca tgaacgataa gtttaaagct gtaggtcact tagccttatc tatttttcta
     4921 gcattgttgc tctttttcta tgcaacaacc accaactata aaaattcaga aacagctgca
     4981 cagaacacgg agtcagaaac ctatgttcac acactgagca atgtaccgat tgagattgaa
     5041 tatgatacaa acaagtattt tatttccgga ttttcttcga cgatagcagt tgaattaagg
     5101 ggctctaatc gtgttctcct acagagagaa tccgatgagt caactcggac gtttcaagtg
     5161 actgcggatt tgagagagtt gagtgatggg acacagactg tcaaactaca attgactaat
     5221 ttgccagcag gagtgagtgc gacactagca ccagatgcga ttaccgttaa gattggtaaa
     5281 aaagttagca aggcattccc ggtagcaggt cgagtctata gtaatcaatt ggcagaaggt
     5341 tacagtctgt ctaaggtttc agtcaacgta gataccgtta aagtgacaac ggatgaagaa
     5401 acaatggcta agattgatca ggtcgaagct gttgcgatgg atgtgagcaa tctgtctgag
     5461 aattatagtg gtacagctaa attacaggct gtagatagcg acggcaatgt cttgccagtt
     5521 gtactgtctc agacggaagc aaatatgcaa attatactta caaaaacaaa ataagaggtt
     5581 atgcaatggg taaatatttt gggacagatg gtgtccgtgg agaagcaaac gtagaattaa
     5641 cgccagaatt agcattcaaa ttaggtcgtt ttggtggtta tgtccttagc cagcatgaga
     5701 cggatgttcc tcgtgtcttt gtggcgcgtg acacacgtat ctcaggtcaa atgttagagg
     5761 ctgccttgat tgcaggactt ctatcagtag ggattcatgt gtataaattg ggagttttgg
     5821 cgacaccggg tgttgcccac ctagtcaaaa ctgaaaaagc aagtgcaggt gtcatgattt
     5881 ctgcaagtca taacccagcg caagataacg gtatcaaatt ctttgcaggt gacggcttca
     5941 agttggatga tgctttggaa gcagagattg aagctctctt ggatgctgaa gaagatacac
     6001 ttcctcgtcc atctgcacat ggtttgggtg atgtggtaga ttatccagaa ggcttgcgta
     6061 aatacgaatc cttccttgtt tcaacaggta ttcagctaga aggtatgaaa gttgccttgg
     6121 atactgccaa tggcgctgcc tcaacctctg ctcgtcaaat ttttgcggat ttgggagctg
     6181 atttgaccgt tatggctgaa catccagacg gtttaaatat caatgaaggc gttggttcaa
     6241 ctcatcctga aaaattgcaa gaactggtca aggaaacagg tagtcaaatt ggacttgcct
     6301 ttgacggaga cagtgaccgc ttgattgccg tcgatgaaaa tggtgatttg gtagatggcg
     6361 accgcatcat gtacatcgtc ggtaaatacc tcgctgatcg aggtctattg gccaaaaata
     6421 caattgtgac aactgttatg tctaaccttg gtttccataa ggctttggat cgtgaaggta
     6481 ttgaaaaagc tgtgaccgca gttggtgacc gttatgtggt tgaagaaatg cgcaaggaag
     6541 gctacaatgt cggtggtgag cagtcaggac atgtgattct gatggattat aacaccacag
     6601 gcgacggcca gttgaccgct gtgcaattga ccaaaatcat gaaagaaact ggtaagaagt
     6661 tgtcagaatt ggcagcagaa gtgaccattt acccacaaaa attggtcaat attcgtgtgg
     6721 aaaacagcat gaaggacaag gcaatggaag tgcctgctat tgcagctatc attgaaaaaa
     6781 tggaagcaga aatggctggc aatggtcgta tcttggttcg cccaagtggt actgagcccc
     6841 tcttgcgtgt catggcagaa gcgccaacgg atgctgaagt cgattactac gtggacacca
     6901 ttgccgatgt ggtccgtgca gagattggtt tagattaaga aaaagacaga gactggaagg
     6961 atttccagcc tcttttgtga ggaaaatatg agtattttag aagtaaagaa tttaagtcat
     7021 gggtttggtg accgcgcgat ttttgagaat gtctccttcc gtctcttgaa aggggaacat
     7081 atcggtcttg tcggtgccaa tggagaaggg aaatcgacct tcatgtccat tgtgacaggt
     7141 caattgcagc cagatgaagg taaggttgaa tggtcacgtt atgtaacagc aggttattta
     7201 gaccagcatg ctaaactaga aaaaggtcaa tcagtccgtg atgtcttgcg gacagcattc
     7261 gatgaacttt tcaagacaga agctcgtatc aatgacattt acatgtctat ggcagaagag
     7321 ggtgccgata tggatgccct catggaagag gttggtgagc tgcaagaccg tctggaaagc
     7381 cgtgatttct atacgcttga tgccaagatt gacgaagtag cgcgtgcgct tggtgtcatg
     7441 gactatggca tggacaagga tgtgacggag ttatcgggtg gccaacggac taaagttctt
     7501 ttggcaaaat tgctcttgga aaagcctgac atcttgcttc tggatgagcc gaccaactac
     7561 ttggatgctg aacacattga ctggctcaaa cgttacttgc agaactatga aaatgccttt
     7621 gtcttgattt cgcacgatat tcccttcttg aacgatgtga ttaacattgt ctaccatgtg
     7681 gaaaatcagc ttttgacccg ttacacaggc gattactacc aattccaaga agtccatgcc
     7741 atgaagcggg ctcagttgga ggcggcctac gagcgccagc agaaggaaat cgcagacttg
     7801 caggacttcg ttaatcgtaa caaggcccgc gttgcgactc gaaacatggc catgtctcgt
     7861 cagaagaagc tggacaagat ggagattatt gagcttcaag cagagaaacc aaagccatca
     7921 tttgatttta aaatggctcg aactccaagt cgctttatct tccaaacgac tgatttggaa
     7981 attggttatg accgtgtctt gacccgtaaa ccgctcaatc tgacctttga acgcaaccag
     8041 aagattgcca ttgtcggtgc caacggtatc ggtaaatcca ctcttcttaa aagtttgctg
     8101 gggattattc caccgctggg cggttctgtg gagcgtgggg agtatctgga actcggttat
     8161 ttcgagcaag aagtagctgg aggcaatcgt cagaccccac tggaagccgt ttgggatgcc
     8221 tttccagccc ttaaccaggc agaagtacga gcagccttgg ctcgttgcgg tctgacttcc
     8281 aagcatattg aaagccagat tcaagttctt tcaggtggtg agcaggccaa agttcgcttc
     8341 tgtttgctta tgaaccgtga aaacaatgtc ttagttctgg acgagccgac taaccacttg
     8401 gatgtggatg ccaaggatga actcaaacgt gcccttcaag cctacaaggg ctctatcctc
     8461 atggtctgcc acgagcctga tttctatcaa ggctgggtgg acgatgtttg ggactttaat
     8521 gaattgactt aagaaacaag ctatcgaaag gtagcttttt ggttcagttt gtaaagacga
     8581 aaatgttatt gcatgctttt caaattttca ctacctgata ctcatttttt attctattga
     8641 ccaagcctcg tttttctgct aatatggaaa aatgtttgtt tggaggtaaa tgagtgaata
     8701 aaataatatc tgtatggaaa aaaatgaatt taatccgaaa aatcggaatt ggtgttattt
     8761 tgggagtgtt actaggctta attgctccaa aaatagcggt cattgctctc tttggtagtc
     8821 tatttgtagg agcattgaaa gctatagccc ctcttttggt tctgaccttg gtagcacatg
     8881 ctctatcaca agctcctgct ggtcaaaaat cgaatatgag gacagttatc tgcttgtatc
     8941 tatttggtac ttttgcggcg gccttcattg ctgtaggagc aagctattta ttccctatta
     9001 aactagttct ttctactaca acgactacgg acattactcc accacaaggg attgctgaag
     9061 tattccaaga tttgttattg aaaatagtcg acaatccgat caatgctctt gcaacagcta
     9121 attatattgg tgttttgaca tgggcggcag tgtttggctt ggcctttcgg aacgctagtc
     9181 aacacaccaa ggatttattg caatcaacag cagaagtgac ttctaaagtc gtcagttgga
     9241 ttattggact agcacctttc ggtatcttag gattagtttt tgatacaatt gcaaataatg
     9301 gattggcagc tcttaagaat tacggagctc tattactagt attagttggt tgcatggctt
     9361 ttgtcgctct ggtggtcaat ccattgattg cctttcttgt tatgaagaaa aatccttacc
     9421 cgctggtatt tgaatgtctt cgagttagcg gtgtaactgc ctttttcaca agaagttcag
     9481 cagctaatat tcctgtcaat atgcagctct gcaaacgttt aggagtggat ccagatacat
     9541 actcagtatc cattccgctc ggtgccacaa ttaatatggc tggcgcggct attacgatta
     9601 atattttaac aatggcagct gttcatacac ttggcatcag tgttgatttc agctcagctc
     9661 ttcttttatc cgttgttgca tcactatcag cagcaggagc atctggggta gcaggtggtt
     9721 cgcttctcct cattccagta gcatgtagcc tatttggtat tccaaatgag ttagccatgc
     9781 aagtagttgg agtcggattt gtggtcggag tgattcaaga ttcttgtgaa acagccctca
     9841 attcatcgac cgatgtcttg ttcacagttg tagcagaacg ctctgcctgg aaaaaataga
     9901 aagaagttgg gtgaccaact ttttttcttc gctttacttc tgaaatctct ttcattttgt
     9961 gataaaatag acttactttg atatagtctt ttggtttact tttattacta gcttcaaagg
    10021 ttcggggaac ctttgaaggt tggaaatgaa acaaacgaag tttgtgtcaa cagccgcagg
    10081 cataactcaa tgctttcttg tttctaggca ttgacttgaa acagtctccc agactgctta
    10141 cacagtcaat ggactgtgta aggtgggaga taatacttgc aaagcaagtt acttttacaa
    10201 aatcaggcaa ggtgagttca aacactccag tggagtgttt gaagttggaa ataaggaaac
    10261 gatgtttcct cgctcgtcga agtaataaaa gataaaccaa atgacgatac tgaaaaggag
    10321 aacacatgac agtaaatttt agagcagagt ttgacaaacg caaagatgag tttctagcgg
    10381 acctctttga cctcctccgc atcaattctg agcgtgacga tagccaggcc gatgcccagc
    10441 atccatttgg acctggacca gtgcgtgcct tggacaagtt cctggaaatc gctcaacgtg
    10501 acggctatcc gactaaaaat gtcgataact acgcaggtca tttcgaattt ggcgagggcg
    10561 acgaagtcct cggtatcttt ggtcacttgg atgtggttcc agcaggtagc ggctggaaca
    10621 ccgaccccta cgagccgcaa atcatagacg gcaagctctt tgcccgcgga tcctctgacg
    10681 acaagggacc gaccatggct tgctactacg gcttgaaaat catcaaggag ttgggccttc
    10741 cgacctctaa aaaagtccgc ttcatcgtcg gtactgatga ggagtcaggc tgggcggaca
    10801 tggattacta ctttgagcac gtcggcctac cattgccaga cttcggattt tctccagacg
    10861 ctgagttccc gattatcaac ggcgaaaagg gcaatatcac agcttatctt cattttgcgg
    10921 gggaaaatag cggagctgct aaactgcatt ccttcacagg cggtctgcgt gagaacatgg
    10981 tgccggagtc tgcgacagct attatttctg gagaccttgc agacctggac agcaagttgg
    11041 cagatttcac agcagcctat ggcctaaaag ctgacgctga aacccttgaa aacggtcagg
    11101 tacaagtgac cgtcatcgga aaatcagccc acggttcaac cccagaagaa ggtgtcaacg
    11161 gagcaaccta tttggcaaaa ttcctcagcc aattcgcctt tgacggagca gctaaagcct
    11221 atcttgactt agcaggacaa gtccttctgg aagaccatga cgctaaaaaa ctcggcgtag
    11281 ccatctacga cgagcagatg ggtgcccttt ctatgaacgc tggtgttttc aaatttgacg
    11341 aaacttcatc agacaatacc attgccctca acttccgtta tccaaaaaat accaaccctg
    11401 aaaccatcaa gtctggtttg gaaaaactag gagtagaagc agtcagcctg tctgagcatg
    11461 gccatacccc acactattgc ccaatcgatg acccaatggt cgcaaccctc ttgtctgttt
    11521 atgaaaaaca cacaggcttg aaaggtcacg aacaagtaat cggtggcgga acatttggac
    11581 gcttgctcaa acgtggcgtt gcctacggag ccatgttccc aggcgatatc aacaccatgc
    11641 accaagccaa cgaatttatc gaagttgagc aactctaccg cgccgctacc atctatgcag
    11701 aagctatcta cgaactcatt aagtaataca tgagaggctg ggcaaaaagc ctagcaccac
    11761 tt
//
LOCUS       DASFQS010000070        11752 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.072, whole genome shotgun sequence.
ACCESSION   DASFQS010000070 DASFQS010000000
VERSION     DASFQS010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11752
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.072"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(83..2590)
                     /locus_tag="U1041_001606"
     CDS             complement(83..2590)
                     /locus_tag="U1041_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEM4768710.1"
                     /translation="MKQASYPIQGMTCASCAMTVEKAVGKLAGMEDVSVNLATEKLSV
                     SYDEKILGLEDIRQAVEKAGYQLVDNLVTESYDISGMTCASCAMTVEKALGKLEGVEE
                     VSVNLATEKATIRYSRDRQNPASLKRAVEQAGYQLIRPEEVEEAADKGPSKEEKLWHR
                     FVWSAAFTLPLLYIAMGPMVPWGGLPLPALLHQPLVYAISQVILLIPILYIGRSFFQK
                     GFKTLLQGHPNMDSLIAVGTGAALVQGLLMIAFLLMGKEVAMHGHHPELYFESAAVIL
                     TLITLGKYFEARSKGQTSEAIKKLMDLAPKTAQVLRNGQEIQVPIEEVVVGDQVIVRP
                     GQQIPVDGQVLEGQTRVDESMLTGESLPVKKALGDNVFGGTLNQQGAITMQATKVGRD
                     TTLAQIIRLVEEAQGSKAPISKLADQVSAVFVPVVMGLALLSGLAWYFLGQESWIFSL
                     SIIIAVLVIACPCALGLATPTAIMVGTGKGAENGLLFKSGQAIETLQGVNTIVFDKTG
                     TITEGKPQVTDIHLLSTKNREQVLQLAASSEQFSEHPLAQALLQAAQTEKIDLLPATD
                     FQALSGRGLSVAIAEQTIYLGNERLIREQGIDVSKGRAVAETFAHQAKTPVFLASQQE
                     LLAVIAIADKVKETSRQAVQALQTMGLEVVMLTGDNEKTAKAIAKEVGIEQVVSQVLP
                     DDKANQVKFLQEQGKTVAMVGDGINDAPALAQAHVGLAIGSGTDIAIESADIVLMHSD
                     ILDVVKAVKLSQATMRTIKQNLFWAFAYNVIGIPIAMGLLHVFGGPLLNPMFAGAAMA
                     LSSVSVVLNALRLKRVKIGSGKELDRTKKSSSTSLYF"
     gene            complement(2711..4552)
                     /locus_tag="U1041_001607"
     CDS             complement(2711..4552)
                     /locus_tag="U1041_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HEM4768711.1"
                     /translation="MKKTFVRIATFLMLVCLFPAQLVQACSGFIIGKGLTTDGSILYG
                     RTEDYPYPPDNGAHNKNYIVVPAASYAEGDMLVDETFGFTAPHLANEFKYTSTPDAAR
                     GDGSNGNYGAHGFNEKGVSMTATVTAIPNAKVLAVDPLVEAGGLGEPILIDYVLPRVT
                     SAREGVELIAKTIDEKGSAEGNIVIIADKNEVWYMEILSGHQYVAIKFPEDKYAIFAN
                     TYYLGHVDFTDTENVIASANVEAVAQQADNYVTVDGQFHIAKSYGPATYAEADRSRVY
                     AGIKLMDPASPVTYEDAVYDLLRQPTDPSRRFSLQDTFALQRNRFEHLPEFRPDDEAG
                     KVKQGDNGANDQAADATYKYALGNENVIDAHVYQINSSLPSAFGGTVWLGLAQTRNTP
                     YVPFYGIVTDTYEAFKNRSASYDTNSWYWTVQNIDKMAISHPELFGTSIQEKWIALES
                     EWIAAQAALDAQYAGLSEDAAVALAPTVTEETLARSAEIFAQLKAVEAEMMAKIEAAT
                     TPSSSSTDSSSSTEPSTSTESSSSGTETSTSTSSSTSASDIGGATDTSSSSGTVVSSD
                     KKVTPTNKKGKSILPSTGEQVSLLLVALGVAGILTAIFLHRKKSSKE"
     gene            complement(4641..5501)
                     /gene="tehB"
                     /locus_tag="U1041_001608"
     CDS             complement(4641..5501)
                     /gene="tehB"
                     /locus_tag="U1041_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HEM4768712.1"
                     /translation="MTVLVPYKRMPIWNQETVPQHFLTKHNTKVGTWAKIKVLRGQLK
                     FEPISDDNEILGEYVYCTTDDIPFVEPQAWHRVTLLTEDTEFFLEFFCQPEDYFAKKY
                     DYTRTHSEVLEALKIIEPCKVLDLGCGHGRNSLYLAQQGFEVTAVDKHVPSIRTLLQV
                     KEAEDLDLQAGTYDINSASLEQDYDWIISTVVFMFLERDRVPAIIRNMQEQTRPGGYN
                     LIVAAMDTEDAPCPMNFSFTFGAGELKEYYRDWELVKYNEDFGQLHKRDEHGNFLKMR
                     FATMLARKNV"
     gene            5657..6700
                     /locus_tag="U1041_001609"
     CDS             5657..6700
                     /locus_tag="U1041_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEM4768713.1"
                     /translation="MKAAIYEKAGKMTVAEIEKPSLQAKDDVIIKVVRACVCGSDLWG
                     YGEDIHHDHGDTNSGHEAIGIVEEVGEDITTLVPGDFVIVPFTHGCGHCDACRAGFDG
                     TCDNHPGYTNWGNNYQSQYIRFHYGNWALVKIPGQPSDYSEGMIKSLLTLADVMPTGY
                     HAARVADVKPGDKVVVIGDGAVGQCAVIAAKMRGASQIIMMSRHADRQQMALESGATA
                     IVAERGEEGIAKVREILGGGADAALECVGTEASIDQALGVLHNGGRIGFVGVPHYNNH
                     ALGSTFAQNIIIGGGSASVTTYDKEILLDAVLKGDINPGRVFTQTYSLENIDQAYKDM
                     ANRKTIKAMIMVD"
     gene            6930..7817
                     /locus_tag="U1041_001610"
     CDS             6930..7817
                     /locus_tag="U1041_001610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768714.1"
                     /translation="MQLIKKVSHFLKSIIPLIVCGIFGIFILSWITGKTPPNIINNPE
                     VLAVCIVAIPTMYLWNVDIKNKNISEDATKVETFINIKNYIEPKYEKLVKELKTQLNS
                     ESVANTKNKNQNNLNDQTYYIDEILNGIYNFTLYLLQVAKTFSDEKKYYDFDLGFIFK
                     TLDKFYSNNKNTTDITRNHLISKIKENILLYFFQTYPIEEMEELSLRLNFLTEVETFR
                     NISFHKIPNLNNVRLNGNPTFTFIECSIDVDNFGVFNQNEITVTCENCEFYSGSLLTK
                     EIRLTEKEFKERYNIDIKN"
     gene            7829..8458
                     /locus_tag="U1041_001611"
     CDS             7829..8458
                     /locus_tag="U1041_001611"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768715.1"
                     /translation="MTKIFYDRRPKESIELVESKDVTYIQIEVTNSNFKNSKVNKDII
                     EKEIKERLSEYKNKQNLTVRYSGNYDKSSKSWRSWHSVDFKLNEDCKNLNSIDLNDIK
                     LTNLSYAFITKVSQNFQTLVFSTEEFAKLLQKKIEKESYTIYQNSQQKYFVKFNFYFS
                     GILQPKKNEASSDKISITSNVTIKPNKNIHPAQRLINKIRSKVQDLFKK"
     gene            complement(8486..8953)
                     /gene="smpB"
                     /locus_tag="U1041_001612"
     CDS             complement(8486..8953)
                     /gene="smpB"
                     /locus_tag="U1041_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEM4768716.1"
                     /translation="MAKGEGNVIAQNKKARHDYTIVDTVEAGMVLTGTEIKSIRAGRI
                     NLKDGFAQIKQGEAWLVNVHIAPYDEGNIWNQEPTRTRKLLLRKKQIESLGNEVKGTG
                     MTLVPLKVYIKDGFAKVLIGLAKGKHDYDKRESIKRREQDRDIKRTMKAINSR"
     gene            complement(8956..11325)
                     /gene="rnr"
                     /locus_tag="U1041_001613"
     CDS             complement(8956..11325)
                     /gene="rnr"
                     /locus_tag="U1041_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEM4768717.1"
                     /translation="MKNEIINYIKEVGPVTMDQLADQFGASSAKSFTDLVKLVSSMEG
                     SRQLVFDNAGRITLPAPKISKNKVTLQGIFRAHKSGFGFVTIDEEEDDLFVSRDDVNF
                     AIEGDRVEVAIKKVADRLKGTAAEAEVIDILEHSLKTAVGLIVFDEDKPEYAGYIKSK
                     NQKIAQKIYIKKSPLVLTGTEILKVDIEAYPNKKRDHFVATIRDVVGHKDDVGIDVLE
                     VLESMDIVSEFPDEVLAEANRVPESPSEKDFEGRLDLRDEIIFTIDGADAKDLDDAVH
                     IKQLKNGNLELGVHIADVSYYVTEGSALDQEAVKRGTSVYVTDRVVPMLPERLSNGIC
                     SLNPNVDRLTQSAIMEIDCKGKVVKHWIGKTVIKTTFRMTYSDVNDMIAGNQEKLATY
                     KAIVPSVELMVKLHETLETMRYKRGALNFDTTEAKIIVNKDGLPVDIQLRQRGIAERM
                     IESFMLAANECVAEHFAKLDLPFIYRIHEEPKSDKLQKFIDYATSFGLTVYGTASSIS
                     QDALQDLMERVKDEPYADVLNMMLLRSMQQARYSEHNHGHYGLGAEFYTHFTSPIRRY
                     PDLLVHRMVRDYGHNPAEKAEHFEQVIPELAKSSSSLERRAIEAEREVEAMKKAEFMQ
                     EFVGQEFDGVVSSVVKFGLFVELPNTVEGLIHITNLNEYYQFHERTLTLQGEKSGRVF
                     RVGQPIRIKLTRADKMTGEIDFAHVPSELDIVEKALKAKRRTASHSNRDRDDRSGRGR
                     GKHHKQEAAGRDSGRHKSGKDHKSKSGKKDKKKKPFYKEVAKKNKKKRR"
BASE COUNT         3359 a         2730 c         2344 g         3319 t
ORIGIN      
        1 ccttttaaag tgggagatat aagctgacgg cagtcagctc acataaattg atgtctggga
       61 atagactgtt tcagctcaac aactagaaat aaagacttgt tgacgaactc ttttttgttc
      121 ggtcgagttc tttcccactc cctattttca cccttttcaa tcgcagagcg ttcaagacga
      181 ctgacactga gctgagagcc atggctgcac ctgcaaacat aggattgagc agaggtccac
      241 caaatacatg taatagcccc atggcgattg gaatgccaat cacattgtag gcaaaggccc
      301 agaagagatt ttgcttgatg gtccgcatgg ttgcctggct gagtttgaca gccttgacca
      361 catccaaaat atcactatgc atgaggacaa tgtcggcaga ctcaatggca atatcagtcc
      421 ctgaaccaat ggctagaccc acatgggctt gagctagagc tggggcatcg ttgatgccat
      481 cccctaccat ggcgactgtc ttgccctgtt cttgtaagaa cttgacttgg ttggccttgt
      541 catctggcag gacctgactg accacctgct caatgccgac ttccttggca atggccttgg
      601 cagttttttc attgtcccct gtcagcatga caacttctag tcccatggtt tgcagagcct
      661 ggacagcctg acggctggtc tcttttactt tatcagcaat ggcaatgact gctagtaatt
      721 cttgctggct ggctaggaaa acaggcgtct tagcttgatg ggcaaatgtt tccgcaactg
      781 cacgtccttt ggaaacatca attccctgtt cccgtatcaa ccgttcattt cccagataga
      841 tggtctgctc tgctattgcc accgaaagac cacgaccaga aagtgcctga aaatctgtgg
      901 cgggcaagag atcaatcttt tctgtctgag ctgcttgtag gagagcctga gccaagggat
      961 gctcggaaaa ttgttcgcta cttgctgcca gctggaggac ctgctcacga tttttagtag
     1021 acaaaaggtg gatgtctgtc acttgtggct tgccctcagt aatggtccca gtcttgtcga
     1081 agacaatggt gttcacacct tgtagggttt caatagcttg accagacttg aacaaaagac
     1141 cattttctgc cccttttcca gtcccaacca tgatagccgt cggagttgct agacccaaag
     1201 cacaagggca ggcgatgacc aagacggcga tgatgatgct taatgaaaaa atccatgatt
     1261 cttgacccaa gaagtaccag gccagaccgg acaagagagc caagcccatg acaactggaa
     1321 caaagacagc agaaacttgg tcagccaatt tggagatagg tgccttagac ccttgagcct
     1381 cttccaccaa gcgaattatc tgagctagag tcgtatcacg accaaccttg gtagcctgca
     1441 tggtaatggc gccttgctgg ttaagggtgc cgccaaaaac attatcgcca agtgccttct
     1501 tcactggtag gctctcaccc gtcagcatag actcatccac acgtgtctgg ccttcgagaa
     1561 cctgaccatc aacaggaatc tgctgacctg gacgaacaat gacctggtca ccgaccacca
     1621 cttcttcaat cggcacttgt atttcctgac catttcgcaa gacctgggcc gtcttaggag
     1681 ccagatccat caatttctta atcgcctcag aagtctgacc tttggaccta gcttcaaaat
     1741 attttcctag ggtaatcaat gtcaagataa cggcggctga ttcaaaatac agttctggat
     1801 ggtgaccgtg catggccact tctttcccca tcagaagaaa cgcaatcatc aaaagaccct
     1861 gaaccaaggc tgcccctgtc ccaacagcaa tcaaggaatc catattggga tggccttgca
     1921 agagagtttt aaagcctttt tggaaaaaac tgcgtccgat atagaggata gggatgagca
     1981 agatgacttg gctgatcgca tagactagcg gttgatggag caaagctggt aatggaagcc
     2041 caccccaagg caccatcggc cccatagcaa tatagagcag tggaagagta aatgctgctg
     2101 accagacaaa tcgatgccac agcttttctt ccttgctcgg tcccttgtcc gcagcctctt
     2161 ctacttcttc tggtcgaatc agctgataac ctgcctgctc aactgctctt ttaagactgg
     2221 ctggattttg tctatcacgg ctataacgaa tagttgcctt ttctgttgcc agattgacac
     2281 tgacttcttc tacaccctct agtttgccca gagctttttc aactgtcata gcacaggaag
     2341 cgcaggtcat gcctgaaata tcataagact cggtcaccaa gttatcgact agctgatacc
     2401 ccgccttttc aactgcctga cgaatatctt ctagtcccaa aatcttttca tcatagctaa
     2461 cactcaattt ttcagtcgct aggttgacac tgacgtcttc cattcctgct agtttaccaa
     2521 ccgctttctc aactgtcata gcacaggaag cacaggtcat accttgaatg ggatagcttg
     2581 cttgtttcat aggttactcc ttttctgact acatctgtaa acaaattata caatatacga
     2641 ctacatttgt aaacaaaatt gtttcaaaaa agtagattga attcaatcca acctactttt
     2701 acatattcat ttattcttta ctggattttt ttcgatgaag aaaaattgct gttaaaattc
     2761 ctgcaacacc tagcgccacc aacaagaggc tgacttgctc acctgtacta ggaagaattg
     2821 atttaccttt tttattggta ggtgttactt tcttatcaga agacactact gttccgcttg
     2881 aggaggaagt atccgtagct cctcctatgt cagaagcact tgtactgctt gaagtactgg
     2941 ttgaggtttc ggtaccactt gatgatgact cagtgctggt cgatggttcg gtactacttg
     3001 atgagtcggt gctgctggat gacggagttg ttgctgcttc aatttttgcc atcatttcag
     3061 cttcaacagc ttttagttgg gcaaaaatct ctgctgaacg agccaaggtt tcctcagtta
     3121 cagttggagc cagagctacg gctgcatctt ctgaaagtcc agcatattga gcatcaagag
     3181 ctgcctgtgc agcaatccat tcactttcaa gtgcaatcca tttttcttga atcgatgtac
     3241 caaataactc tgggtgtgag atggccatct tatcaatatt ttgtaccgtc cagtaccatg
     3301 aattcgtgtc ataagaagct gagcgatttt taaaggcttc ataagtatcc gtcacaatac
     3361 catagaatgg aacatacggt gtattccttg tctgagccaa gcccaaccac actgtgccac
     3421 cgaaggctga tggtaagctg ctattgatct gataaacatg ggcatcgatg acgttttcat
     3481 taccaagagc gtatttataa gtcgcatctg ccgcttggtc attcgcacca ttatcccctt
     3541 gttttacctt gcctgcttca tcgtctggac gaaattctgg aagatgttca aaacggttac
     3601 gttgtaaggc aaaggtatct tgtaaactaa agcgacgact tggatctgtt ggctgacgta
     3661 gcaaatcata cacagcatct tcataggtta caggcgatgc tggatccatc aatttaatac
     3721 ctgcatacac acgggaacgg tctgcttcag cataagttgc aggaccgtat gatttagcga
     3781 tatggaactg cccatcaact gtcacataat tatctgcttg ttgagcaaca gcttctacat
     3841 ttgcagaagc aatcacattt tctgtatcgg taaaatcaac atgacctaga tagtaagtat
     3901 ttgcaaaaat tgcatactta tcttcaggga acttgatggc tacgtattgg tgtcctgaca
     3961 aaatttccat gtaccaaact tcatttttgt cagcaataat aacaatattc ccttctgctg
     4021 agcctttttc atcgattgtc tttgcaatca actcaacacc ttcacgcgca ctagtgaccc
     4081 taggaagaac ataatcaatc aaaattggtt ctcccagccc tccagcttca actagaggat
     4141 caactgccaa gactttagca tttggaatag ctgttacagt agcagtcatg gatacgcctt
     4201 tttcattaaa accatgcgcc ccataattac catttgaacc atccccacgc gccgcatcag
     4261 gcgtagaggt atacttgaac tcatttgcca agtgtggtgc tgtaaaacca aatgtttcat
     4321 ccaccaacat atctccctca gcatagcttg ctgctggaac cacaatataa tttttattgt
     4381 gcgctccatt atctggtgga tagggataat cttccgttct accataaagg atagaaccat
     4441 ccgttgtcaa ccctttccca atgataaagc ctgaacaggc ttgaacaagt tgagcaggga
     4501 ataggcaaac caacattaga aatgtggcta tacgaacaaa agtctttttc atagacttct
     4561 cctttcatat aataaaatac ccatttacac atatattgta acgcaaaagc acctgccttg
     4621 caagtgcttt cagatatatt ttacacattt tttctagcca acatggtcgc aaatcgcatt
     4681 ttgaggaaat taccatgttc atcacgctta tggagctggc caaaatcttc attgtacttg
     4741 accaattccc agtcacgata gtattccttc aactcacccg ctccgaaggt aaaggagaaa
     4801 ttcatcggac aaggtgcatc ttccgtatcc atggccgcca cgatcaagtt atagccaccc
     4861 ggccgtgtct gctcctgcat attgcgtata atggctggca ctcgatccct ctccaagaac
     4921 ataaagacca cagttgagat aatccaatcg tagtcctgct ccagactggc tgaattgatg
     4981 tcataggtac cagcttgtag atccaaatcc tccgcttcct tgacctgcaa gagggtccga
     5041 atgctcggca cgtgcttgtc aaccgccgtc acctcaaaac cctgctgggc caaataaaga
     5101 ctgttcctgc catgaccaca acccaaatcc aaaaccttac aaggctcgat gattttcaag
     5161 gcctccaaga cttccgaatg cgtccgtgtg tagtcatatt ttttagcaaa ataatcctct
     5221 ggctgacaga aaaattccaa gaaaaactcc gtatcctctg tcaacaaggt cacccgatgc
     5281 caagcctgtg gctccacaaa aggaatatca tctgtcgtac aatagacata ttctcccaaa
     5341 atctcattat catctgaaat gggctcaaat ttgagttgac ctctcaagac cttgattttg
     5401 gcccaagtcc ccaccttggt attatgcttg gtcaaaaaat gctggggaac cgtctcctgg
     5461 ttccaaatgg gcatgcgttt gtaaggaact aaaactgtca tgatttctcc tttttatcaa
     5521 tagtagttct agtctatcac aaaggaaata tgaattcaaa cctatttttt acttgacttg
     5581 gagtgaactc taaggtgtat aatatttcat atcaatcaga aaggatattt acttgcaaag
     5641 taaaaatgtg ataaatatga aagcagctat ttatgaaaaa gccggtaaga tgaccgttgc
     5701 agaaatcgaa aaaccaagtc ttcaagccaa ggatgatgtc attatcaagg tcgtgcgggc
     5761 ctgcgtctgt gggtcagacc tttggggcta cggtgaagat attcaccatg accacggtga
     5821 caccaactct ggtcatgaag ccatcggtat cgttgaagag gtaggcgaag acattacaac
     5881 acttgttcct ggtgacttcg ttattgttcc atttacacat ggttgcggcc actgtgatgc
     5941 ctgtcgtgct ggctttgacg gtacttgtga caaccatcca ggctacacca actggggcaa
     6001 caactaccag tctcaataca ttcgtttcca ctatggtaac tgggccttgg tcaaaattcc
     6061 tggtcagcca agcgactact cagaaggtat gattaaatcc cttttgacat tagctgatgt
     6121 tatgccaaca ggctaccatg ctgcgcgtgt tgcagatgtc aaacctggtg ataaggtggt
     6181 tgtcatcggt gacggagcag tggggcaatg tgctgtcatt gctgcaaaaa tgcgcggagc
     6241 ttctcagatt atcatgatga gccgtcacgc agaccgccag caaatggctt tggaatcagg
     6301 ggctactgcc atcgtagcag aacgaggtga ggaaggtatt gccaaagtcc gtgaaattct
     6361 tggaggtggc gctgatgctg ccctcgaatg tgttggtaca gaagcttcaa ttgaccaagc
     6421 cctcggcgtg cttcacaatg gtggtcgaat cggctttgtc ggtgtgccac actacaacaa
     6481 ccatgccctt ggctcaacct ttgctcaaaa tatcattatc ggtggtggct ctgcttctgt
     6541 cacaacctat gataaggaaa ttttgctcga tgctgtcctc aaaggtgaca tcaacccagg
     6601 tcgagttttc acccaaactt actccctaga gaatatcgac caagcctaca aagacatggc
     6661 caaccgtaaa acgattaaag caatgattat ggtggattaa ggtcagataa tgtataagaa
     6721 caaacacaaa tatttttgat acatatcata aaaagcataa aatcaatatt tttagcaata
     6781 tgattttatg ccctttttat ttccaaatct ctttattacc ttttgaatta taaattcaaa
     6841 ataaagtaca aaaaaatcct tataaaaacc ttatcaccta aaaatttatg ctataataga
     6901 aataaaaaaa taagataaga aagtacgata tgcaattaat aaaaaaagtt agtcatttct
     6961 taaagtcaat tattccacta attgtctgtg gaatttttgg aatctttata ttaagttgga
     7021 ttacaggaaa aactcctcca aatattataa ataatccaga ggttttagca gtttgtattg
     7081 tagcaatacc aactatgtac ctttggaatg tagatataaa aaataaaaac atcagtgaag
     7141 atgctacaaa agtagaaaca tttatcaaca ttaaaaatta tattgaacca aaatacgaaa
     7201 aattagtgaa agaactaaaa acacaattaa atagtgaatc tgtagccaat actaaaaaca
     7261 aaaatcagaa taatttaaac gaccaaactt attacataga tgaaatatta aacgggatct
     7321 ataattttac actttattta ctacaagttg ctaagacttt ttctgacgaa aagaaatatt
     7381 acgactttga tttaggtttt atttttaaaa cgcttgataa attctacagc aataacaaga
     7441 acacgacaga tattactaga aatcatttga tttctaaaat aaaagagaat attctacttt
     7501 acttttttca aacctaccct atagaagaaa tggaagaact tagcctacgt ttaaatttct
     7561 taactgaagt agaaacattt agaaatatat ctttccataa aataccaaac ttaaataatg
     7621 taagactgaa tggtaaccca acttttacat tcatagaatg ttctattgat gttgataatt
     7681 ttggagtatt taatcaaaat gagattacag taacatgtga aaattgtgaa ttctatagtg
     7741 gttctttact tacaaaagaa attagactaa ctgaaaaaga gtttaaagaa agatataata
     7801 tagatattaa aaactaagag gtatgcaaat gacgaaaatc ttttatgaca gaagacctaa
     7861 agaaagtata gagctagtcg aatccaaaga tgttacatat attcaaattg aagttacaaa
     7921 ttccaatttt aaaaattcaa aagtaaataa agatataata gaaaaagaaa taaaagaacg
     7981 attaagtgag tataaaaata agcaaaatct tactgttaga tacagcggaa attatgacaa
     8041 atcgagtaaa agttggagaa gttggcattc cgtagatttc aaattaaatg aagattgcaa
     8101 aaatctaaat tctatagatt taaatgatat aaaattgaca aatctaagct atgcatttat
     8161 aactaaagta tctcaaaatt ttcaaactct cgttttttct actgaagaat ttgcaaaatt
     8221 attgcagaaa aagattgaaa aagaatcata tacaatctat caaaattctc aacaaaaata
     8281 ctttgtaaag ttcaattttt attttagtgg cattttacaa cctaaaaaaa atgaagcttc
     8341 ttcagataaa ataagtatta caagtaatgt aacaatcaaa cccaataaaa atatccatcc
     8401 tgcacaacga ttaattaata aaatcagaag taaggtacag gacttattca aaaaataaca
     8461 aaaaagacca ggatttctcc cagtcttagc gactattgat agccttcatg gtccgcttaa
     8521 tatcacggtc ttgttcacgg cgtttgatgg actcccgttt gtcgtagtcg tgcttccctt
     8581 tggcaagtcc aatcaagacc ttggcaaatc cgtccttgat atagaccttg agaggcacca
     8641 gagtcatccc tgttcccttg acctcattgc ccaaggactc gatttgcttt ttccgcaaga
     8701 gaagtttgcg ggtccgcgtt ggctcctggt tccagatatt gccctcatcg tagggagcga
     8761 tatggacatt gactagccaa gcctcgccct gcttgatctg ggcaaagccg tccttaaggt
     8821 tgatccgccc cgcacgaata gacttaatct ccgtccccgt caggaccatc cccgcctcca
     8881 ctgtatcgac aatggtatag tcgtggcggg cttttttatt ctgtgcaatc acattgccct
     8941 cacccttggc catgcctatc tccttttctt cttgttcttt ttagccactt ctttgtaaaa
     9001 tggtttcttt ttcttgtctt ttttaccact ttttgacttg tggtctttcc cagacttgtg
     9061 acgtccgcta tcgcgaccag cagcttcttg tttgtggtgc ttgccccgtc ctcgccctga
     9121 ccgatcatca cggtcacggt tggagtgact agccgttctc cgcttggctt tcagagcttt
     9181 ttccacaata tccagctcgg acggcacgtg ggcaaaatcg atttcccctg tcatcttgtc
     9241 cgcccgcgtt agcttgatac gaattggctg accgacacgg aagacccgac ctgatttctc
     9301 accctgcaag gtcagagttc gctcgtggaa ctggtagtac tcgttgagat tggtgatatg
     9361 aatcagacct tcaaccgtgt ttggcaactc gacaaaaagc ccaaacttga ccacgctaga
     9421 cacgacacca tcaaactctt gcccaacaaa ttcttgcatg aactctgcct tcttcatggc
     9481 ttcgacttcc cgctctgcct caatggcacg gcgttctaaa ctggacgaag acttggcaag
     9541 ttcaggaatg acctgctcaa aatgctctgc tttttccgca ggattatgac catagtcccg
     9601 caccatgcgg tgaaccagca ggtcgggata gcggcggatc ggactggtga agtgggtgta
     9661 gaactcggca cccagaccgt agtggccgtg gttgtgctcc gagtagcgtg cctgctgcat
     9721 ggaacgcagc aacatcatgt tgaggacatc ggcatagggt tcatccttga cccgctccat
     9781 gaggtcctgc agggcatcct ggctgatcga gctagccgta ccatagaccg tcagaccaaa
     9841 gctggtcgca tagtcgatga acttctgcag cttgtccgac ttaggctcct cgtggatccg
     9901 atagatgaaa ggcaggtcca acttagcaaa atgctcagca acgcactcat tggccgccaa
     9961 catgaaggac tcaatcatcc gctcggcaat gcctcgctgg cgcagttgaa tatcgactgg
    10021 cagaccgtcc ttgttgacga tgattttggc ttctgtcgtg tcaaagttga gagcaccacg
    10081 cttatagcgc atggtttcca atgtttcatg gagtttgacc atgagctcaa cactcggtac
    10141 gattgccttg tatgtagcca gcttttcctg atttcctgca atcatgtcat tgacatccga
    10201 ataggtcata cggaaggtgg ttttgataac cgttttgcca atccagtgct tgacaacctt
    10261 gcccttgcag tcaatttcca taatagccga ctgggtcagg cgatccacat ttggattgag
    10321 ggaacaaatg ccgtttgaca ggcgttctgg caacattggc accacacggt cggtcacata
    10381 gacagaggtt ccacgcttga cagcttcctg atccaaggct gagccttccg tcacatagta
    10441 gctgacatcg gcgatatgga cacccagctc cagattgcca ttcttgagtt gcttgatatg
    10501 gaccgcatcg tccaagtcct tggcatccgc accgtcgata gtgaagatga tttcatcccg
    10561 caggtccaag cgtccttcaa agtccttctc agacggactt tctggtaccc gattggcctc
    10621 tgccaagact tcatctggaa actccgacac gatatccata gactccaaga cttccaagac
    10681 atcaatcccc acatcgtcct tgtggcccac cacgtcccga atggtcgcaa caaagtgatc
    10741 ccgtttcttg tttggatagg cttcaatatc gacttttagg atttccgttc cggtcaatac
    10801 cagaggtgac ttcttgatgt aaatcttctg agcgattttc tggtttttag acttgatgta
    10861 gcctgcatac tctggcttat cttcgtcaaa aacaatcaag cccaccgctg ttttcaggct
    10921 atgttccaaa atatcaatga cttccgcttc cgcagccgtt cccttgagcc tgtccgccac
    10981 tttcttaatg gccacttcca ctcggtcacc ctctatagcg aagttgacat cgtcacgact
    11041 gacaaagagg tcatcttcct cctcatcaat agtcacaaag ccaaaaccag acttgtgggc
    11101 acgaaaaata ccctgtaagg ttaccttgtt cttagagatt tttggagcag gaagagtaat
    11161 ccgcccagca ttatcaaaga caagttgacg actgccttcc atactcgaaa ccagcttgac
    11221 caagtctgta aagctcttag cagaactggc tccaaactga tctgccagct ggtccatggt
    11281 cacaggacca acttctttaa tatagtttat aatttcgttt ttcatgttgt atttaccaga
    11341 gtgctagtta agaatctagc actatttctc tttcagtcct ttagtttatc ttttattact
    11401 gcgacgtacg aggaaactcc gtttccctat ttccaacttc aaataatttc atcattattt
    11461 gaactcgctt tgtcgtactt tgcagaagtg acttgcgagg caagtcttat ctccaaccta
    11521 taacagcctt taggcggtta tagcaacctg cagctcgttg cctagtacta aaagcaaact
    11581 aaaagactgt attttgcgtt atatccagac gctgtggttg attgctccaa caatcaaatg
    11641 attgttggag gtgggagata ggatttgcaa agcaaatctc aatagttcgc gaataacgct
    11701 ccgaaccata cctattcaac ttatgcgggg gcgggcagac gaactcttta ta
//
LOCUS       DASFQS010000071        11588 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.073, whole genome shotgun sequence.
ACCESSION   DASFQS010000071 DASFQS010000000
VERSION     DASFQS010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11588
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.073"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..3321
                     /locus_tag="U1041_001614"
     CDS             <1..3321
                     /locus_tag="U1041_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001279481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HEM4768718.1"
                     /translation="VAEKGKKGSTSLKNFALGGAVFSLAKKGVDLLVSSLDGAIKRFD
                     TLEKFPRVMKAMGHSAEDVASSTDKLANGIDGLPTTLDEVVGTAQRLTSITGNLRKST
                     DTTLALNNAFLASGASSADASRGLDQFSQMLSAGTVDLQSWKTLQETMPYALQKTAES
                     FGFAGKSAQRDFYAALKSGQITFDQFSNRLVELDKGVGGFAELARENSKGIATSFNNL
                     KNAVVRGVAGTIKALDDLSKEVSGKTIAEHFDSMKVVITAAFKVVNGAIKSSTPVFIF
                     LFGVLDKGIDTAQALTPVLITLGSAILAMRAANTVISGIEKLRVLLIQTSAAAGMQGT
                     TMKSLLAVQAVSKTQTMAETVARMQQLGVLKMSALAHALKTKAMTAEQVVTVLSTAAT
                     NANTTAEMLKYKAMSAGVLVHGLLTGAISIQTFATIASTAAVTAFNAALTALTGPIGW
                     VIAGIGLLVGAGVALWQWLTRESEESKRLSKAQEELAESTDNLKKSVKDSAVARKDSL
                     QDVEANRESYKKLSAEIVALSQKENKSAADKKNLQKKIQTLNDSVEGLNLAYDKNTDS
                     LSHNAEQINARISAMEAESTWEASQKNLLDIEQQRADIGAQLAEIAKLRTEWNNASDV
                     SDAKRREELKKLNEQELELQATQAALQTEYEQTSAVQQAAAEAMATAAENGTNRQVIA
                     YENMSEAQKTAIDNMRSKYGELLETTTGMFDAIEQKSAISIEQINANLETNRAAIEQW
                     SSNLAILAERGVDQGVLEQLRQMGPEGAAQTQVFVNATDEELAVLQENFRANAEAAKN
                     AMGSVMDSAGVEIPDKVKGLVTNITSGLQAELANANFASLGEEVPNGAAVGIENGSAK
                     AVEATKSVGTKIQQGFKENLGIHSPSRVFTEFGGHITEGLANGIANGTNSPVGKVKNL
                     AVKLREPFSGISGRFSEIGAMAMQGLAGGIQANAGVAIAAANSVASRVTSTIKRALDI
                     HSPSRVMRDEVGRFIPQGIAVGIEADKDVLERTMAKLKQSVTITAPEVSLGLDKSLAS
                     QVTVRSSSKHTVTEKIEHVFDKSKEQVNRALEIAEEALQRPVYMVLEDGTLVGRLGEK
                     LSHYQSPADKIDMMLRRI"
     gene            3321..4817
                     /locus_tag="U1041_001615"
     CDS             3321..4817
                     /locus_tag="U1041_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016056168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HEM4768719.1"
                     /translation="MTNLSVVFNGYDLSQVMRITDIKRSIGNSRSVSTNDAPAIGVNV
                     HDIKIGPKTIKVGFTLKGINLESVKHELAGVFRTDEVARLTFSDEPDKYYLALVTGEI
                     EPDNIRSWYQKGEIEFLIPDGVAHSSAYKRFDNPREENGKLVFDLVNNGNVPAPPIIT
                     VKHNSENGYIGIVNLNTALEIGDKEEADTETYKRSEILFDYVSNNGIVKGFAQGQKNT
                     AILNDLSQSLDTQLYIKNEFGRPHLAMGSRGAGSRPHHAGSITWEIPLDSSSDRGALN
                     EYIWWRQIFWAGSVMQKGFIKLTVSDTEGRFLYGVETFKRGNGVDSEFNLLVSDGRSG
                     YKILRSWPFKCTHLDSDNPFNAERGWADILRRDDMLQVHWWGSYPQFYVPEIKGRKSA
                     KIHVALGALGSHPHIHHMYLDSIVYRKDFVTGTVDVPNRFQIGSTVVLDVEKDLVTID
                     GLPANHQVVDGSGWNLTIPPGKSQLEILLSSFIQKTPTVSVNIEERHL"
     gene            4818..8231
                     /locus_tag="U1041_001616"
     CDS             4818..8231
                     /locus_tag="U1041_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000927612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768720.1"
                     /translation="MILTIHDNNLQKVAFIDNNKQGTLNFYNDKWTRYLSKASSLFEF
                     TVFKQTIQTDVAPYQTANALNDRSFVSFVYKGRTYLFNVMTIEETEHTITCTCKDLNL
                     ELTNEYTNPFKSNKARTFKEYCDVMDLLEFATLRIGVNEISDQKRTLGWEGQDTKLNR
                     ILSLANKFDAEVDFEVKLNANGTIKDFILNVYREHDDKHQGVGNVRSDIILKKGKNIR
                     SIKRKIDKTDLIVNAIRPTAQGENGQEITIAGLGPWEVKNENGVVEFFQQGDMLYAPI
                     SMQKYPSTWTGSTGNRDKYTRKDITVDTKSKETLRTQAYKELMRSAYPSVTYEIDGYV
                     DLEIGDTAKVYNGDFYPALLLEVRVSEQTISFTKPSTNKTVFDNVRALKSKLSNGIQE
                     RWQELFEASQPYLIKLATDNGVIFKNGTGQSIVTPTLYKGGRPITANVTWRWSLDGAV
                     KTGMTYTVRGADVTDTSTLTVAAYIGNDEVAVDELTFVSVLDGRDGVKGEKGDPGQRG
                     SDGLPGRDGVGIRSTTVAYASSTNGTTAPTTGWTAVVPTVAPGNYLWTKTVWTYTDGN
                     TETGYTVSRIGRDGNTGRDGIAGKDGVGIRSTTITYGKSTSGTIQPTSWTSQVPSVPN
                     GQFLWTKTVWAYTDNTSETGYSVAKMGEIGPTGAKGDRGATGPQGLQGPAGPQGPRGI
                     QGLQGPKGDQGIAGPKGADGRTQYTHIAYADNATGGGFSQTDQTKAYIGMYQDFNATD
                     SSNPAAYRWTKWTGDKGDKGDRGIPGVKGADGRTPYIHFAYSDNADGTGLTTSDNGQR
                     YIGHYSDYTQADSTDKTKYRWADRWAKIEVGGINLLTGTDEESVYISKDPAAMEFLRT
                     PYDLAKVFDKHGLVTYTLSFDLKADKDGAVHVYMQNGSGSRYGGLHADIGVTTEWKRY
                     HVTFTPTEGNMELSESFLAFYGVYGTGVVPHARKFKLEKGTVPTDWSLAIEDWQLELN
                     SKAGQAFTQEQLNLLNERAGIMQAELEAKASLDTVNNILKQIKDMRAADEATWAKVEK
                     DLITHLQRVIKIETNLGDQAQRWNAVDTFMQVSNDGLSLGKADGSSSMLFSPDGRITM
                     FSSGTPVMYVDKGVIHIDNGIFSKTVQIGRFREEQYHNNPDINVKRYVY"
     gene            8251..10260
                     /locus_tag="U1041_001617"
     CDS             8251..10260
                     /locus_tag="U1041_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001137165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768721.1"
                     /translation="MAVFRYSGNWRGFLEGTSSTVSQDISGNSSVIKIDVWIGMDTGW
                     NIEFGNTYGNTVTVTCDGQSQTIAVGPLYLNGSKKHLGSVQFRVGHNADGTKSAGISL
                     SSNMSNISYGTLNFGNASGNWVHGLTTIPRSSSVSVSPGVIGSALTININRQSSSFKH
                     VVRYAWGNKSGTIATNVDTSTTWTIPLDFANDIPNSTSGTGTIYVDTYSGSTKTGTQS
                     TTFTASVPDSIKPSLTGFTLVDGNTAARTLIPGEQQFVQIVSNIAVHFGQATGAYGST
                     ITSYHAEIVDRNQSTSQNGGSLGIMNYHGQVTIRARVTDSRGRTSNMIERTVTVLEYF
                     APAFNFSVERSGATSSTFSILRNARIAPLTVGGSQRNIMTLTFRVATADSNNYTPDNG
                     PASGTFTTLASLTNSLANLSGTYSSDKSWDVIGILEDKFTRSEFKIKVSTEAVVFSYE
                     KGNRFAVGKIVDTNLPGGSVESTGGYYLNGKSIQQYQLTRNDGRAHINLYSKIEEYVQ
                     SGFYYVDSPTLPDPVGGYLLVESYDTRYVKQTYTPYNKNKTYLRVKNNTTWTPWVEYA
                     KDDHPNLINTGWQSAGYPGTYYKRVGDVLTIKYDFTGNGSTMNIGSIPSDIWVAPQSY
                     MLVIAKWAISGSDNSHVQINQGTGAFNVLATGNGIVYRGQLTIMI"
     gene            10273..10674
                     /locus_tag="U1041_001618"
     CDS             10273..10674
                     /locus_tag="U1041_001618"
                     /inference="COORDINATES: protein motif:HMM:NF018771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1366 domain-containing protein"
                     /protein_id="HEM4768722.1"
                     /translation="MKFKFLTKSTEWLGSSPHRTIVVVGNEEGATIPYAFDKEAINLT
                     DSELFDMAMEKMYQENFPNRAEDEKFEFFNKAILEVRKETEKNREIAKTMSLSFTQFV
                     ELLEERGIVLDDEETEEVADHETIIENQEQN"
     gene            10817..11233
                     /locus_tag="U1041_001619"
     CDS             10817..11233
                     /locus_tag="U1041_001619"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768723.1"
                     /translation="MVEEPNLFIQILHAATPFAGTLVTAIGGVAIAKIGANNKNELTA
                     INARLTTLQKVADDNKSTGEAIKHDVKNLKTSSRSSRRYVLYRDLDAAIERGWTTLEE
                     RREIAKLFESYKILGGNGEIETMYGIYCELPLKKEN"
     gene            11235..11585
                     /locus_tag="U1041_001620"
     CDS             11235..11585
                     /locus_tag="U1041_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HEM4768724.1"
                     /translation="MNQLTEIIIGSATGILAIVAGMIVHEVKKYLIAKGGKRAIEITE
                     ILARNAVNAVEQITKLDQDKHVDKLDIAKRRINSQLAKYNIYMTETQLETFIESAVKQ
                     MNDSWKGEENDNSK"
BASE COUNT         3570 a         2172 c         2829 g         3017 t
ORIGIN      
        1 gttgcggaaa aaggcaaaaa aggctctact tccctcaaga acttcgcttt gggtggagcg
       61 gttttctctt tagctaaaaa aggtgtcgat ttactggtta gctcgcttga tggagctatt
      121 aaacgatttg atacattgga aaaattccct cgagttatga aagcgatggg ccatagtgca
      181 gaagatgttg ctagttcaac agacaagctc gcaaatggca ttgacgggct acctacaact
      241 ctggatgagg ttgtgggtac agctcaacga ttgacgtcta ttacgggaaa tcttcggaaa
      301 tctacagata ctacactagc cttgaataac gcattccttg catcaggcgc ttcaagtgca
      361 gatgcaagtc gtggtctaga ccagtttagc cagatgttat ctgcggggac agtggacttg
      421 caatcatgga agacgttgca agaaacaatg ccgtatgctc tacaaaagac tgctgaaagt
      481 tttggatttg caggaaaatc cgcacaacgt gacttttatg cagctttgaa gagcggacaa
      541 attacctttg atcaattttc aaacagatta gttgaattag acaagggcgt aggaggtttt
      601 gcggagttag ctcgagaaaa cagtaaaggg atcgccacat cgtttaacaa cttaaaaaac
      661 gcagttgtcc gtggtgtagc tgggacaatt aaagctttag atgatttatc taaagaagta
      721 tcaggcaaaa ctatcgcaga acacttcgat agcatgaagg tggtgattac tgctgctttc
      781 aaagttgtaa acggtgcaat caagtcttct actcctgtat tcattttttt gtttggtgtt
      841 ttggataaag gtattgatac agcacaagcc ttgacccccg tattgataac tttaggctca
      901 gctattttgg cgatgagggc agctaatacg gttattagcg gtatcgagaa gttgcgggta
      961 ctgcttatcc aaacaagcgc agccgctggt atgcaaggca caactatgaa atctctcctt
     1021 gcggtgcaag cagttagcaa aacacagaca atggcagaaa ctgtagctag aatgcaacaa
     1081 ttaggcgtgt tgaaaatgtc tgctctagcc catgctttga aaacaaaagc gatgactgcg
     1141 gagcaagttg tcactgtact atctactgct gcaactaatg ccaacactac agccgaaatg
     1201 ttgaaatata aggctatgtc agcgggtgtt ctagttcatg gtctgttaac gggagctatt
     1261 agtattcaaa cttttgcaac cattgcaagc accgcagctg taacggcgtt taatgctgct
     1321 cttactgctt taacaggtcc tataggctgg gtaatcgcag gtatcggatt gttagtcggt
     1381 gctggtgttg cgttatggca atggctgaca agggaatcag aagagtctaa gcgtctgtct
     1441 aaagcgcaag aggagttggc agaaagcaca gacaatctaa agaaatctgt taaagatagt
     1501 gcagtagcac gaaaagatag cctacaagac gtggaagcta atcgtgaatc gtataaaaaa
     1561 ctttctgcgg aaattgtcgc tctttcacaa aaagagaata agtctgccgc cgataagaag
     1621 aatttgcaga agaagattca gacacttaat gactctgtgg aaggtttgaa cttggcctac
     1681 gataaaaaca cggattcgtt gtcgcacaat gccgaacaga ttaacgctcg tatatctgca
     1741 atggaggctg agagtacatg ggaagctagc caaaaaaact tgctggatat tgagcaacaa
     1801 cgtgctgata ttggagcgca attagctgag attgccaagt tgcgtacgga gtggaacaac
     1861 gcttctgatg tttcagacgc taagcgacga gaagagttga aaaagctgaa cgaacaggaa
     1921 cttgaactac aagcgactca ggctgcttta caaactgagt acgaacaaac ttctgcagtc
     1981 cagcaagcag cggccgaagc gatggctaca gcagccgaaa atggtacaaa tcgacaagtc
     2041 attgcttacg agaatatgtc agaagcacaa aaaacagcta ttgacaatat gcgttctaag
     2101 tatggcgagc tacttgaaac aacaacaggt atgtttgacg caatcgagca aaaatcggct
     2161 atatcgattg aacaaatcaa tgctaattta gagacgaacc gtgccgctat tgaacagtgg
     2221 tcctctaacc ttgctatttt ggcagaacgt ggtgttgacc agggagtctt agagcagtta
     2281 cgtcaaatgg gtccagaagg cgctgcgcaa actcaggttt ttgttaatgc gaccgatgaa
     2341 gagttggcgg tcttgcaaga gaattttaga gctaacgcag aagcagctaa aaacgctatg
     2401 ggaagcgtta tggactctgc cggtgtagag ataccagata aggtaaaagg tctagtaacc
     2461 aatataacaa gtggcttgca agctgaacta gcaaatgcca attttgcttc gttaggcgaa
     2521 gaagtcccta acggtgcggc ggtaggaata gaaaatggct ctgctaaagc tgtagaagcc
     2581 acgaagtctg tggggacaaa aatacaacaa gggttcaagg aaaatctagg tattcactcg
     2641 ccttcaagag tgtttaccga gtttggtggg catatcacgg aaggtcttgc gaatggtatc
     2701 gctaacggca ctaattctcc agttggcaaa gtgaagaatc tagcagttaa attgagagaa
     2761 cctttttcag gaatcagcgg tagattttcg gaaattggag caatggcgat gcaaggtttg
     2821 gcaggcggta tccaagctaa tgctggagtt gctatcgctg ccgctaattc tgtggcaagt
     2881 cgagtaactt ctacgattaa gcgtgcttta gatattcact ctccgtctcg tgtcatgaga
     2941 gatgaagtcg ggcgatttat tcctcaaggt atcgcggtcg gtatcgaagc agataaagat
     3001 gtccttgaac gtacaatggc taaactgaaa cagtcagtta cgattactgc accagaagtg
     3061 tcactaggat tggataagag cttggctagt caagtgacgg taagaagtag tagcaagcat
     3121 actgtgaccg aaaaaatcga acatgtgttt gataaatcta aagaacaagt taatcgtgca
     3181 ttggagattg cagaagaagc tttgcaaaga cctgtttaca tggtgcttga ggatggaact
     3241 ttggtaggca ggttgggaga aaaactctct cactatcaga gtccagcaga taaaatcgat
     3301 atgatgttaa ggaggattta atgacaaatt tatcagttgt ttttaatggc tatgatttat
     3361 cgcaagtcat gcgcattact gatattaaac gttctatcgg caatagtagg agtgtctcaa
     3421 caaatgacgc tccagctatt ggtgttaatg tacatgatat aaaaataggt cctaaaacta
     3481 tcaaagtcgg ttttactctt aaagggataa atttagaaag tgttaagcac gaattagccg
     3541 gtgtatttcg aactgacgag gtggcgcgct taaccttttc tgatgaaccc gataaatatt
     3601 atctggcgtt agttactggt gagattgaac cagacaatat tcgtagttgg tatcaaaagg
     3661 gggaaataga atttctaatc cctgacggtg tcgctcattc gagtgcctat aaacgttttg
     3721 acaatccaag agaagagaat gggaaactgg tttttgattt agtgaataac ggcaatgtac
     3781 ccgctcctcc tatcattacg gtaaaacaca actccgaaaa cggctatatc ggcatcgtaa
     3841 acctaaacac cgctctagaa atcggagaca aagaagaagc ggatacggag acgtacaagc
     3901 gttcggaaat tcttttcgat tatgtctcta acaatggtat tgtcaaaggc tttgcacagg
     3961 gtcaaaaaaa tacagctatt ctcaatgatt tatcgcaatc gttggacact caactgtata
     4021 taaaaaatga gtttggtcgc ccgcacttag ctatggggag tcgaggtgct ggttctagac
     4081 cacatcatgc tggttctatt acttgggaaa ttccactgga tagtagtagt gatagaggcg
     4141 ctttgaacga gtatatttgg tggaggcaaa tcttctgggc aggaagtgtc atgcaaaaag
     4201 gttttatcaa attaacggtt tctgatacag agggccgttt tttgtatggt gtcgaaacat
     4261 tcaaacgtgg aaacggtgta gactcggaat ttaatctgct tgtctcagat gggcgtagtg
     4321 gatacaagat tttgaggagt tggccgttta aatgcacgca tttagatagc gacaatccat
     4381 tcaatgcaga gagaggttgg gcggatattc taagacgtga tgatatgtta caagttcatt
     4441 ggtggggttc gtatcctcaa ttctatgtac cggaaatcaa aggtcgaaaa tctgccaaga
     4501 ttcacgtcgc tttaggcgct ttgggaagtc acccacatat ccatcacatg tatttagaca
     4561 gtatagtcta tcgcaaggac tttgtgacgg gaactgtaga tgttcctaat cgttttcaga
     4621 ttggttctac cgtagtgttg gatgtcgaaa aagacttggt tacaattgac ggactacccg
     4681 caaatcatca ggttgtagat gggtctggtt ggaatttgac tattcctccg ggcaaatctc
     4741 aattagaaat tttgttgtct agctttattc aaaagactcc gaccgtctct gtaaatatag
     4801 aagaaaggca cttatagatg attttaacga ttcatgataa caatttacaa aaagttgcct
     4861 ttattgataa caataaacag gggactttga atttttacaa cgataagtgg acacgttatc
     4921 tgagtaaagc aagtagcctt tttgaattta ctgtatttaa acaaaccatc cagacggatg
     4981 ttgcccctta tcaaaccgca aatgcactga atgatcggtc tttcgtttcg tttgtgtaca
     5041 aaggacggac atatctcttt aatgtcatga ctattgaaga gactgaacat accattacct
     5101 gtacttgtaa agatttgaac ttggaattga ctaacgaata caccaatcca ttcaaatcta
     5161 acaaagctcg tacattcaaa gaatattgcg atgttatgga cttgttggaa tttgcgactt
     5221 tacgaattgg tgttaacgaa atttcagacc aaaaacgcac acttggatgg gaaggtcaag
     5281 ataccaagtt gaaccgtatt ctatcgctgg ccaataagtt tgatgcagag gtcgactttg
     5341 aggttaaact gaacgctaac gggactatca aagattttat cttgaacgtc tatcgagaac
     5401 atgatgataa acatcaaggt gttggaaatg ttcggtccga cattattttg aaaaaaggca
     5461 aaaatattcg ttctattaag cgtaagattg ataaaacgga tttgattgtc aatgccatta
     5521 gaccgactgc acaaggcgaa aacggtcaag aaataaccat cgcagggtta ggaccttggg
     5581 aagtaaaaaa tgaaaatgga gtggtggagt ttttccaaca aggagatatg ctctacgctc
     5641 ctatttctat gcagaaatac ccatccacat ggacgggttc tactggcaat cgtgataaat
     5701 atactcgcaa agacattact gtggatacta aaagcaagga aacacttagg acacaggctt
     5761 acaaagagtt aatgcgttca gcttatccgt cggttactta tgaaattgat ggttatgttg
     5821 atttggagat aggagatacc gccaaggtct acaacggaga tttctatccc gctttgttgc
     5881 tggaagtgcg cgtttcagaa caaactatta gtttcactaa gccaagtacg aataagactg
     5941 tatttgacaa tgtcagagcg cttaaaagca agttgtcaaa tggtattcag gagcgttggc
     6001 aagagctgtt tgaagcgtca cagccctacc ttatcaaact agctactgat aatggcgtta
     6061 ttttcaagaa tggaactggt caatccattg tgacacccac tctttacaag ggcggtagac
     6121 caataactgc caacgtgact tggcgctggt ctttggatgg cgctgttaaa acggggatga
     6181 cctacactgt ccgtggtgca gatgttacag atacatctac tttgacggtg gcagcataca
     6241 taggtaacga tgaggtagct gttgatgagc tgacgtttgt aagcgtattg gatggtcgag
     6301 atggtgtaaa aggcgaaaaa ggagaccctg gacaaagagg gtctgatgga cttccaggtc
     6361 gtgacggagt gggtattcgt tcgacgaccg tcgcttatgc tagttcaaca aatggtacca
     6421 cggcgccgac gactggttgg actgcagtag ttccgactgt tgcccctggc aattatcttt
     6481 ggactaagac ggtatggact tatacagacg gcaacacaga gaccggctac actgtctctc
     6541 gtattggtcg tgacggaaac actggccgtg atggtatcgc tggtaaggac ggagtaggta
     6601 ttcgttcaac gacgattact tacggaaaat cgacatctgg cacaattcag ccaacgtcat
     6661 ggacatctca ggtaccaagc gtccccaacg gtcaattttt gtggacaaaa accgtttggg
     6721 catatacgga taatacttca gaaactggtt actcagtggc taagatgggg gaaataggtc
     6781 ctacaggcgc aaagggtgac cgaggggcta caggtccaca aggactacag gggcctgcag
     6841 gtccgcaagg tccacgggga atccaaggcc ttcagggtcc taagggagac caggggatag
     6901 ctggccctaa aggtgctgat ggtcgtactc agtacaccca cattgcttac gcagataatg
     6961 caactggcgg aggatttagt cagacagacc agacaaaagc atacatcggc atgtatcaag
     7021 atttcaacgc tactgacagt tctaacccag ctgcttacag atggactaag tggacgggtg
     7081 ataaaggcga caaaggagac agaggtattc ctggggttaa aggggcagat ggcagaacgc
     7141 cttatatcca ttttgcttac tcagacaacg cagacggtac aggcttgacc acatcggata
     7201 atggtcagcg gtatattggt cactattcgg actatacaca ggctgatagt acggacaaga
     7261 caaagtatcg ctgggctgat aggtgggcga agattgaagt tggtggtatt aatttactga
     7321 cgggtacaga tgaggagagc gtttatatca gtaaagaccc tgctgctatg gaatttttgc
     7381 gaacgcctta tgacttggca aaggtttttg ataagcatgg tctggtgaca tatactctga
     7441 gctttgattt aaaagcggat aaggatggag cggtccatgt gtatatgcaa aatgggtcgg
     7501 ggtctcgcta tggcggtctc catgcggaca taggtgttac gacggaatgg aagaggtatc
     7561 atgtgacctt taccccgaca gaaggaaata tggaactaag tgaaagtttt ttggctttct
     7621 atggtgttta tgggactggt gtagtgccac atgcaagaaa gttcaaactg gaaaaaggga
     7681 ctgtcccgac ggattggtca ctagctatag aggattggca attagaactc aactccaaag
     7741 cgggccaagc atttacccaa gagcaactca atttactaaa cgagcgggcg ggtatcatgc
     7801 aagcggagct ggaagccaaa gcgagtctgg atactgtaaa caacatcttg aaacaaatca
     7861 aagatatgag agcagccgac gaagctacat gggccaaagt tgaaaaggac ctgataactc
     7921 acttacagcg tgtcataaaa attgagacaa acctaggaga ccaagcacag cgctggaatg
     7981 cggtagatac ctttatgcag gtctcaaacg atggtttgtc actaggtaag gcagacggta
     8041 gctccagcat gttgtttagc ccagatggac gtatcacgat gttttcgagt ggtactccag
     8101 tcatgtatgt ggataaaggg gttatccaca ttgacaacgg tattttttca aagacggttc
     8161 aaatcggacg ttttagagaa gaacagtacc ataacaatcc agacatcaat gttaaacggt
     8221 atgtttatta gaaagggata gcttgaaagt atggcagtat ttagatattc agggaactgg
     8281 agaggtttcc tagaaggcac atcatccacc gtcagtcaag atataagcgg aaacagctca
     8341 gtaatcaaga ttgatgtttg gataggaatg gacacagggt ggaacattga gtttggtaat
     8401 acttacggca ataccgtcac cgtcacttgt gatggtcaat ctcaaactat tgccgtaggt
     8461 cctctatacc tcaatggctc caaaaagcat ttaggctcag tacagtttag agtggggcac
     8521 aatgctgacg gaacaaaatc agcaggaatt agcctgagtt ctaatatgag taatatcagc
     8581 tatggaactt tgaactttgg taatgcttcg gggaactggg ttcatggact aaccacaatc
     8641 ccacgttcca gttctgtaag tgttagccct ggtgtcattg gtagtgcact tactatcaat
     8701 atcaaccgtc aaagctctag ttttaagcac gttgtccggt atgcctgggg aaacaaatca
     8761 gggacaatcg caaccaatgt agacacatct acaacttgga ctatcccact tgatttcgca
     8821 aatgatattc cgaactcaac aagtgggact ggtacaatct atgttgatac ctactcaggt
     8881 tcgacgaaaa caggtacgca gtcaactacc ttcacagcaa gcgttccaga tagtatcaag
     8941 cccagtttga ctggtttcac actggtagac ggaaatactg cagctaggac gctgattcca
     9001 ggagaacaac agtttgtgca gattgtttcg aatatcgctg tacatttcgg acaagctaca
     9061 ggtgcatacg gatcgaccat cacaagttat cacgcagaaa ttgtcgacag gaaccaatct
     9121 accagtcaaa atggtggtag cttagggatc atgaactacc atggtcaggt tactatacga
     9181 gcaagggtga cagacagccg tggtcgaacg agtaacatga tagagcgaac tgtgacagtg
     9241 ttggaatatt ttgcaccagc tttcaacttt agcgtggaac gttcaggagc gacatcgagt
     9301 acattctcta ttctcagaaa cgctcgtata gctccgctga cggtaggtgg tagccagcga
     9361 aatataatga ctttaacttt tcgtgtagct acagctgata gcaataatta cacgccagac
     9421 aatggtccgg catctggtac ttttacgacc ttggcgagcc tgacaaattc actggccaat
     9481 ctatcaggta cttattcttc tgataagtcg tgggatgtca taggaatact tgaagacaag
     9541 ttcactcgtt cggagtttaa aatcaaagtt tcgaccgaag cggtagtatt cagctacgag
     9601 aagggcaacc gctttgcggt tggtaaaatc gtagatacga accttccggg agggtctgta
     9661 gagtcaactg gtggatatta cttgaacggt aagtcgattc aacagtatca gttgacgaga
     9721 aatgacggta gagctcatat aaatctatac agcaaaatag aagagtatgt gcagtcaggt
     9781 ttttactatg tggatagccc aaccttaccg gatccagttg gggggtattt acttgtagag
     9841 agctatgata ctagatatgt caagcaaact tacactcctt ataacaaaaa taagacctat
     9901 ttacgagtaa aaaataatac gacttggaca ccgtgggttg aatatgccaa ggatgaccac
     9961 cccaacctca tcaacactgg ttggcagtca gcagggtatc caggtactta ttacaagcgt
    10021 gttggggatg tactaacaat taagtacgat ttcacaggta acggatcaac aatgaacata
    10081 gggagcatcc caagtgatat ttgggttgcg ccacagtcct atatgttagt aatcgctaag
    10141 tgggctatta gtggttctga taacagccat gtccaaatca accaaggcac aggagcgttt
    10201 aatgtactgg ccactggtaa tggaattgtg tatagaggtc agttaactat tatgatttag
    10261 aaaggaaata ccatgaagtt caaattttta accaagagta cggagtggct tgggtcttct
    10321 ccacatcgta ctattgtagt tgtagggaac gaagagggag caactattcc ctatgccttt
    10381 gataaagaag ctatcaattt gacagatagc gagctattcg atatggctat ggagaaaatg
    10441 tatcaagaaa atttcccgaa cagagcagaa gatgagaaat ttgagttctt taacaaagct
    10501 attttagaag tccgaaagga aactgaaaag aatcgcgaaa tcgctaagac aatgtctttg
    10561 tcatttactc agtttgtcga gttgttagaa gagcgcggaa tcgtcttaga cgatgaagaa
    10621 acagaagagg tcgcagacca tgaaactatt atcgaaaatc aagaacaaaa ttagaggagg
    10681 aatcgcaatg atggttaatt tatattttat gcaggtcgaa gaaggttgga tcacacttga
    10741 gcaagtgcct aaaaagtacc gtgaacgtgt acgtaaattg cttgagctgt ctgaattgaa
    10801 agatggtaag tagcctatgg tcgaagaacc aaatcttttt atccaaattt tgcatgcagc
    10861 aacacctttc gctggaacat tagtgacggc gattggcggg gttgccatcg caaagattgg
    10921 agcgaacaat aagaacgaac taacggctat caatgctcgt ctaacgactt tgcaaaaggt
    10981 tgcagatgac aacaagtcga ctggtgaagc gattaagcat gatgtcaaaa atctcaaaac
    11041 gagtagccgt agtagtcgtc gttatgtcct ctatcgcgat ttggacgctg ccatcgagcg
    11101 aggatggaca actcttgaag aacgtcggga aatcgccaag ttgtttgaat cgtataagat
    11161 tttaggcggc aatggcgaaa ttgaaactat gtatggcata tattgtgagt tgccattgaa
    11221 gaaggagaat tgatatgaat caacttacag aaattattat tgggtctgct acaggtatct
    11281 tagctatcgt tgctggtatg attgtccatg aagtcaagaa gtatctgatt gccaaaggcg
    11341 gtaaacgagc cattgaaatc acagagattt tggcgcgcaa tgcggttaat gccgttgagc
    11401 agattaccaa attagaccaa gataagcacg tcgataagtt agacatagct aagcgtcgta
    11461 taaatagcca gcttgccaaa tacaacattt acatgaccga aacacagttg gaaaccttta
    11521 ttgaatcagc tgtaaaacag atgaatgata gttggaaggg agaagaaaat gacaacagta
    11581 aatgaagt
//
LOCUS       DASFQS010000072        11358 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.074, whole genome shotgun sequence.
ACCESSION   DASFQS010000072 DASFQS010000000
VERSION     DASFQS010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11358
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.074"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(187..462)
                     /locus_tag="U1041_001621"
     CDS             complement(187..462)
                     /locus_tag="U1041_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEM4768725.1"
                     /translation="MANKQDLIAKVAEATSLTKKDSAAAVEAVFGAVADYLAAGEKVQ
                     LIGFGNFEVRERSARTGRNPQTGAEIKIAASKVPAFKAGKALKDAVK"
     gene            complement(552..1148)
                     /locus_tag="U1041_001622"
     CDS             complement(552..1148)
                     /locus_tag="U1041_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpmS family protein"
                     /protein_id="HEM4768726.1"
                     /translation="MRLRKAGNLNIWKWLFLAQLALLIGCGIVLYTRIQTDREDLTKL
                     VQTSTEDTKVGTFSTNREQLNQTLTNYLKEYQTEEFSYQLFITSQQVVFEGSYQVFGV
                     TIPLYIYFQPSKMEDGSILLRITEISVGSLSLPKTEVLAYLQKNYKLPAFVKIDSEQA
                     QVQVQLTELKNKFGLYGKANTIDLYNDQFIVDIYRKRQ"
     gene            complement(1120..1953)
                     /locus_tag="U1041_001623"
     CDS             complement(1120..1953)
                     /locus_tag="U1041_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM4768727.1"
                     /translation="MNNRKLIQGFVFFFLAILGSIFLFHQLIPVASSRISRQELTVSE
                     KISFRYVALGDSLTEGVGDTTGQGGFVPLLAQSLTNDYGYEVDYKNFGVSGNTSNQIL
                     KRMKEDGELISYLKTADLLTLTVGGNDLRKAIIKNIANLKVSTFDKPAKDYGKRLDTI
                     IKTARKNNPNLPIYVVGIYNPLYLNFPELTEMQTIVDNWNTMTEQITEKYQHVYFVPI
                     NDLLYKGLEGEAGISQNGSQVTNNLLYEEDSFHPNNTGYEIMKKAILERMNETTESWE
                     P"
     gene            complement(1946..2779)
                     /locus_tag="U1041_001624"
     CDS             complement(1946..2779)
                     /locus_tag="U1041_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4768728.1"
                     /translation="MSKIKIVTDSSTTIEPSLVEELNITVVPLSVMVDGVVYSDNDLK
                     EGEFLELMRGSKNLPKTSQPPVGLFAETFADLAKDGSQIIAILLSHALSGTVEAARQG
                     ATLSGADVTILDSSFTDQAEKFQVVEAARMAQAGASKEQILAAIETVKEQTELYIGVS
                     TLENLVKGGRIGRVQGMLSSLLNIRVIMEMKDHQLTPIVKGRGNKTFKKWLEEFTATL
                     ADKKVAEIGISYSGTADFANEMKSQLQEYVSKEISVLETGSIIQTHTGEDAWAILIRY
                     E"
     gene            complement(2873..4534)
                     /gene="recN"
                     /locus_tag="U1041_001625"
     CDS             complement(2873..4534)
                     /gene="recN"
                     /locus_tag="U1041_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEM4768729.1"
                     /translation="MLLEVSIKNFAIIEQVSLNFENGMTILSGETGAGKSIIIDAMNL
                     MLGARATTDVIRHGAAKAEIEGLFSFENSRALEQILLEQGIEVADELIIRREILQNGR
                     SVSRVNGQMVNLSVLKQIGQYLVDIHGQHDQEELMKSQHHIRLLDSFGEDEFWSLKDR
                     YQTTFDAYRSLRKRVLEKQKNEQEHKARIEMLEYQIAEIEAADLKSGEDIQLNQERDK
                     LLNHKQIADTLTNAYALLDNEDFSSLNNLRSAMSDLQSLEEFDPDYKQLSSSLTEAYY
                     VVEDVTKRLSDVVDNLDFDGNRLLQLESRLDLLNTITKKYGGTVDDVLDYFSKISEEY
                     NLLTGNDLSGDDLEVQLKNLEKELVERAGLLSQSRHELAVVLEDIIRQELQDLYMEKA
                     RFQVRFTKGKFNREGNETVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFARKE
                     GKTSIVFDEVDTGVSGRVAQAIAQKIYKIGQYGQVLAISHLPQVIAIADYQFFIEKIS
                     DEHSTVSRVRLLTKEERIEEIAKMLAGDKITDAARNQAKELVEKG"
     gene            complement(4537..4962)
                     /locus_tag="U1041_001626"
     CDS             complement(4537..4962)
                     /locus_tag="U1041_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEM4768730.1"
                     /translation="MNKRERLEVIKDLVVRFPIDTQEEIVERLEAMGVNATQATVSRD
                     IKELGIIKVPSADKGYIYGLPKAGLVKVKSQNVFEVSVMDKMINLRLVPGSSAVVKRR
                     ILEQFQEHVFSVIADDDSILLIVTNEGIISQIEQTVRGW"
     gene            complement(4955..5776)
                     /locus_tag="U1041_001627"
     CDS             complement(4955..5776)
                     /locus_tag="U1041_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEM4768731.1"
                     /translation="MAKERVDVLAFKQGLFETREQAKRGVMAGLVVSVINGERYDKPG
                     EKIDEGIELKLKGEKLKYVSRGGLKLEKALQVFQLSVEGQTTIDIGASTGGFTDVMLQ
                     AGAKQVYAVDVGTNQLAWKLRQDERVISMEQYNFRYAELGDFELGQPSFASIDVSFIS
                     LSLILPALHRILAEGGQVVALIKPQFEAGREQIGKNGIVKDKSVHLKVLEDVTKMAVE
                     TGFSIKALSFSPVQGGHGNIEFLAYLEKTNEPVQIDKQEITNTVYQAHEEFKKDE"
     gene            complement(5769..6641)
                     /locus_tag="U1041_001628"
     CDS             complement(5769..6641)
                     /locus_tag="U1041_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000256278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM4768732.1"
                     /translation="MVDVKRIDQEIRDFYYNRGTIVSEELIDAILYSIDGGGKRIRPV
                     LLLQIVEGFGVELQQAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDE
                     ATAILAGDSLFLDAFGLLSLADLPNQVLLELVQLMSLASGTFGMVGGQMLDMLGEGKK
                     LEIFDLINIHSNKTGRLLTFPFHAAGIITQQPSSVVGSLWQAGMLIGHAFQVRDDILD
                     VTADFDELGKTPRKDLAAEKATYPSLLGLEESKFIVQDSLNKAVAIFKELEEHNGFKG
                     QEVYQLIESLRING"
     gene            complement(6641..6856)
                     /locus_tag="U1041_001629"
     CDS             complement(6641..6856)
                     /locus_tag="U1041_001629"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002963102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEM4768733.1"
                     /translation="MSKQTKTFEENLAELEGIVTKLERGDVALEEALAEFQKGMVLSK
                     DLQKTLAEAEKTLVKVMQADGSEAEMD"
     gene            complement(6831..8174)
                     /locus_tag="U1041_001630"
     CDS             complement(6831..8174)
                     /locus_tag="U1041_001630"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEM4768734.1"
                     /translation="MVEYLSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPSHQY
                     FSLKDDKAVIQATMWAGVYKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDG
                     IGALAIKFEQLKQALTQEGLFKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRF
                     PGVEIVLYPTKVQGDGAAQEVVANIQRANERDDLDVLIVGRGGGSIEDLWAFNEEIVV
                     RAIFESRIPIISSVGHETDTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQEN
                     RAYQAMTNRLRFLRGQLEKISQSVMFRQPERLYDGYLQKLDRLTNQLQIRMKEVYSQQ
                     KQASLLLNQRLQGLQLGRKVESFQERIIQQERLLKSNMANIYDNKMAKADKLIEALTM
                     LDTSRIVARGYAMIRQDGRVIDSVENVQMGENLTIQMKDGQLDVEVKHVQTDKNI"
     gene            8340..9248
                     /locus_tag="U1041_001631"
     CDS             8340..9248
                     /locus_tag="U1041_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEM4768735.1"
                     /translation="MKIDDLRKSSNIEDRRGQSSSNSSFSSGSSGGNALLGLLFSRLG
                     WKGKLLVLVLLVAFGGMSNLGGLLSPSTGTNPYQSSQVTTTGTDVSDADAEFMSKVLG
                     STEDFWVQEFKANGLNYNAPTMVFYTNQTQTGCGVSSAQAGPFYCSADRKIYIDTSFY
                     QELSSKYKAAGDFATAYVIAHEVGHHVQNELEVLGAYHQKRAQLSDKEGNALNVRLEL
                     QADYYAGAWAKYVDGQGILDAGDIDEAMNAAHAVGDDTLQQEAYGRTVPDSFTHGTSE
                     QRKKWFNLGYTYGDLAHADTFSVEKP"
     gene            complement(9457..10008)
                     /locus_tag="U1041_001632"
     CDS             complement(9457..10008)
                     /locus_tag="U1041_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEM4768736.1"
                     /translation="MVVFLVICIFLVRIYFLKISIKNEKRILKNGGSEFGVQNTKLLT
                     VVHILFYLSCLVEAVVRHAKFDTLSSLGLIFLLFSMGMLFWVTRLLGDIWTVKLMLVK
                     DHRFVDHWLFRVVKHPNYFLNIIPELIGLALLCHATYSFLILFPVYMVILYRRIHEEN
                     NLLKTVIIPNGTVQSVAEITGNN"
     gene            complement(10211..11246)
                     /locus_tag="U1041_001633"
     CDS             complement(join(10211..10751,10750..11246))
                     /locus_tag="U1041_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611577.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEM4768737.1"
                     /translation="MKLTIEQTKELKTYLKDKTYSPFHRRLQVILFRAEGLSYKEITN
                     LIGYSKYTIWSLQRKYELEGISALVRETRGGRNRQYLTLQEEEAFLKEQLTASLNGEF
                     VTINSLYEAYQKRVGHPTTKEGFYAILKRHGWRKVTPRPEHPKKADAETILASKNKIF
                     IHENRKKRFKNSRRYHKVRLMYQDEAGFGRISKIGKAWAPKGVRPHVHSHYIREYRYC
                     YGAVDAHTGESFFIIAGGCNTDWMNVFLKQLSEAYPDDYILLVMDNAVWHKSSTLEKP
                     HNIGFEFIPPYTPEMNPIEQVWAEIRKRGFKNKAFKTLDDVINKLQEVIRELDWSILK
                     PIVSRQWFKNT"
BASE COUNT         3169 a         2564 c         2050 g         3575 t
ORIGIN      
        1 ttttgcccct tttttgccgc ttaaacaaga aaaaagccta ctgcacgacg tagaaacgtt
       61 gatacactag gctttttgat gcttagcctc gctcttttgt ttttaagcga gggataaaac
      121 agtctatccc cagttttgct ctcccgtttt caagcaaaag ataaaaaggt ccactggacc
      181 tttttattat tttacagcgt ccttgagagc tttaccagct ttgaatgctg gaacttttga
      241 tgctgcgatt ttgatttctg cacctgtttg agggttgcga cctgtacgtg ctgaacgctc
      301 acgaacttca aagttaccga aaccgatcaa ttgtactttt tcaccagctg caaggtagtc
      361 tgctactgct ccgaatactg cttcaacagc tgctgctgag tcttttttag tcaatgaagt
      421 cgcttctgca acttttgcaa tcaaatcttg tttattagcc atttgctaag tcctccaata
      481 attttctgag ttattactca cttctatata gtacctaatt ttaggcgttt ggtcaagttt
      541 ttaatgctat ttcactgtct ttttctgtag atatcaacaa tgaattggtc gttgtacaaa
      601 tcaatcgtat tcgcctttcc atacagacca aatttgttct tcagttctgt cagttgaacc
      661 tgtacttgcg cttgttcgga gtctattttt acaaaggcag gtagtttata atttttttgt
      721 aaataagcta atacctctgt tttcggcaag gataaacttc caactgatat ttctgttatc
      781 cgtaacaaaa tactgccatc ttccattttg ctaggttgaa aataaatgta gagtgggata
      841 gtcacaccaa aaacctgata gctgccttca aaaactactt gttgactcgt tatgaataat
      901 tgataggaaa actcttccgt ctgatactct tttagatagt tagtgagggt ttggttgagc
      961 tgttccctgt tagtggagaa ggtcccaacc ttggtatctt ctgtactagt ctgaacgagc
     1021 tttgttaaat cctctctatc tgtttgaatc cgtgtataga ggactattcc gcaaccaatc
     1081 aataaagcca actgggctaa aaatagccat ttccaaatat taaggttccc agctttccgt
     1141 agtctcattc attctctcca atatcgcttt tttcataatc tcatatccag tattattggg
     1201 atggaaactg tcttcctcat acagtaaatt attggtaact tggctaccat tttgactaat
     1261 accagcctcc ccttccaatc ctttatagag caaatcattg atcggaacga agtagacatg
     1321 ttgatatttt tcagttatct gttctgtcat cgtattccaa ttatcaacaa ttgtctgcat
     1381 ttctgtcaat tcaggaaaat tgaggtagag tggattgtaa atcccgacaa catagatggg
     1441 aagatttgga ttattcttac gcgctgtctt aataattgta tccaatcgtt ttccgtaatc
     1501 ttttgcgggc ttatcaaaag ttgaaacttt gagattggca atgtttttaa taatagcctt
     1561 gcgcaaatcg ttgccaccaa ctgtcagagt taacagatct gctgttttta agtaacttat
     1621 cagctctcca tcttccttca ttcgcttaag aatctgatta ctggtattcc cagaaactcc
     1681 gaaattttta taatctactt cataaccata atcgttagtt agagattgag ccaacaaggg
     1741 aacaaagccc ccctgtccag ttgtatctcc aacaccttct gtcaaagaat caccaagtgc
     1801 cacatatcga aaactgattt tttctgatac ggtaagctct tgcctggaga ttcgagatga
     1861 ggcaacagga atgagttgat gaaatagaaa aatcgaccct agaattgcca gaaaaaagaa
     1921 aacaaagcct tgaatcaact tcctgttatt cataacgaat caaaatagcc caggcatcct
     1981 caccggtatg agtttgaatg atggaacctg tctctaaaac agaaatttct tttgagacgt
     2041 actcttgtaa ttgactcttc atttcatttg caaaatcagc cgttcctgaa taggaaatac
     2101 caatctcggc tactttttta tctgctagag ttgccgtgaa ctcttccagc cattttttaa
     2161 aggtcttatt acctcgtcct ttgacaatcg gagtcagctg atggtctttc atttccatga
     2221 tgacacggat attgagtagg ctactcagca tcccttgaac acgtccaata cgaccaccct
     2281 tgactagatt ttctagggtt gatacaccga tgtataattc tgtttgttct ttgactgttt
     2341 caatagctgc aaggatttgt tctttgctgg caccagcttg tgccatgcgt gctgcttcta
     2401 caacttggaa tttttcagcc tgatctgtaa agcttgaatc gagtattgtc acatcagcac
     2461 cagaaagggt tgctccttgt ctagcagctt ctaccgtccc tgacaaggca tgcgacaaga
     2521 gaatggcaat aatctgactg ccatctttag ccaagtcagc aaaagtttcc gcaaagagtc
     2581 ctactggggg ctgacttgtt tttggcaagt ttttcgaccc acgcatgagc tctaagaatt
     2641 ctccttcttt taaatcgttg tcagagtata cgactccgtc aaccattaca gataatggaa
     2701 caactgttat attcaattct tcgaccaaac tgggttcgat agtcgtactt gaatccgtaa
     2761 caatcttaat ctttgacata tttcatccta caattctctt caattttgcc atctattata
     2821 acaaatttta actaaaaaat aaactttgga cataagcaaa aaggctagtc gcctaacctt
     2881 tttctactaa ttcttttgct tgattacggg ctgcatctgt gattttgtca ccggctaaca
     2941 tcttggcgat ttcctcaata cgctcttctt tggtcaagag acggacacga gaaacagtcg
     3001 aatgttcgtc ggatattttc tcaataaaga actgataatc tgcaatagca atgacttgtg
     3061 gtagatgaga aatcgccaat acttgaccat attgtccgat tttataaatt ttctgggcaa
     3121 ttgcctgggc cacacggcct gaaactcctg tatccacctc atcaaagaca atagaagttt
     3181 taccttcttt acgggcaaag gctgacttaa tggccaacat caagcgagac aattctcctc
     3241 cagaagccac cttaaccaga ggcttgaagt cttcgcctgg gttggtggag atgtaaaatt
     3301 ctactgtttc atttccttct cgattaaatt ttcctttagt aaatcgaact tggaaacgag
     3361 ctttctccat atacaagtct tgcaattctt ggcggataat atcttctaaa acaactgcca
     3421 attcatggcg tgattggctg agcagacctg ctcgttcaac caattctttc tctaagttct
     3481 taagctgcac ttccaaatca tcaccagata aatcattgcc tgtcaataga ttgtattctt
     3541 cactgatttt actaaaatag tccaaaacat catcaacagt tccaccatat ttcttcgtaa
     3601 tggtattgag caaatccaga cgactttcca attgcaagag acgattgccg tcaaaatcta
     3661 gattatcgac cacatcactg agacgcttgg tcacatcttc aacgacataa taagcttctg
     3721 tcaggctaga agagagctgt ttgtagtctg ggtcaaattc ttccagactt tgcaagtcac
     3781 tcattgctga gcgtaggttg ttcaagcttg aaaaatcttc attgtctaac agtgcatagg
     3841 cattggtcag tgtatctgca atttgtttgt ggttgagcag tttatcgcgt tcctgattga
     3901 gttgaatatc ttcaccagac ttcaaatctg ccgcttcgat ctcagcaatt tggtattcca
     3961 acatctcaat ccgcgccttg tgttcttgct catttttttg cttttcaaga actcgtttgc
     4021 gaagactacg ataagcatca aaggttgtct gataacggtc tttaagactc caaaattcat
     4081 cttctccgaa actgtccaaa agacggatat ggtgctggga tttcatcaat tcttcctggt
     4141 catgttgacc atgaatatct actaaatatt gcccaatctg tttcaagaca gataaattga
     4201 ccatttgccc attgacacga ctgaccgaac ggccattttg taggatttca cgacggataa
     4261 tgagctcgtc agctacttca atcccctgtt caagcaaaat ctgctcgaga gctctgctat
     4321 tttcaaagga aaagagccct tcaatctcag ccttggcggc cccatgtctg ataacatctg
     4381 tcgtcgcacg cgcccctagc atcaggttca tagcgtcgat gataatggat ttacctgcac
     4441 ctgtttcacc agatagaatg gtcatcccgt tttcaaaatt cagtgatacc tgctcaataa
     4501 tggcgaagtt tttaatagac acttctagta acatggctac caccctctaa ccgtctgttc
     4561 gatttgcgaa ataatgcctt cgtttgtaac aatgagcaga atactgtcat catcagcaat
     4621 cactgaaaaa acatgttctt gaaattgttc caaaatccgg cgtttgacca cagcagagct
     4681 tccaggtacc agacggagat taatcatttt atccatcact gagacttcaa aaacattctg
     4741 cgatttcacc ttaacaagac ctgcctttgg taaaccataa atatatccct tatccgctga
     4801 tggaacctta ataatgccaa gttccttgat atcacgtgaa accgttgctt gtgtcgcatt
     4861 gacacccatt gcttctagac gttcaacaat ttcttcctgt gtatcaatag gaaatcggac
     4921 taccaaatct ttaatgactt ctaatcgttc tcgtttattc atccttttta aattcctcat
     4981 gtgcttgata gactgtattt gttatttcct gcttatcaat ttggactggc tcatttgttt
     5041 tttctaaata agccaaaaat tcgatattgc cgtgacctcc ttgaacaggg gaaaagctaa
     5101 gggctttgat tgagaagcct gtttccacgg ccatttttgt cacatcttcc aagactttca
     5161 agtgaacgga tttatccttg acaatgccgt ttttcccaat ctgttcacgt ccagcttcaa
     5221 attggggttt gataagggca acaacctggc cgccctccgc taaaatacga tggagtgctg
     5281 gcaaaatcag actcaatgag ataaagctga cgtcaatgga cgcaaaactt ggttgaccaa
     5341 gttcgaaatc tcccaactca gcatagcgga aattgtactg ttccatgctg atgacacgct
     5401 cgtcctgacg caatttccag gccagctgat tggtcccaac atctactgca tagacctgct
     5461 tggcaccagc ctgcaacata acatccgtaa atccgcctgt tgaagcccca atatcaatcg
     5521 ttgtttgacc ctcaactgat aattggaaaa cctgcaaggc tttctccaat ttgagaccac
     5581 cacggctgac atacttgagt ttttccccct tgagcttgag ttcaattccc tcgtcaatct
     5641 tctcacctgg tttgtcgtag cgttccccgt tgatgacgga tacaactaag ccagccataa
     5701 caccgcgttt ggcctgctcc cgcgtctcga aaagcccctg tttaaaagct agtacatcta
     5761 ctctttcctt agccattgat tcgtaaactt tctatcaatt gatacacttc ttgcccctta
     5821 aagccattgt gttcttctaa ttccttaaaa atggccacgg ccttattcaa tgaatcctga
     5881 acaatgaatt tggactcttc taaccctaac aagcttggat atgttgcttt ttcagccgcc
     5941 aaatctttcc gaggcgtttt gcccaattca tcaaaatctg ccgttacatc taaaatatca
     6001 tctcgaacct ggaaggcatg accaatcaac atcccagctt gccacaagga accgacaacg
     6061 gaactaggct gttgcgtaat aatccctgct gcatgaaatg ggaatgtcaa taatcgacct
     6121 gtcttgttgc tatggatatt tatcaggtca aaaatttcca atttttttcc ttcacctagc
     6181 atgtccagca tttgaccacc gaccatccca aaggttccag atgctaatga cataagctgt
     6241 accaattcaa gtaaaacctg gtttggcaaa tcagccagag acaggaggcc aaaagcgtcc
     6301 aaaaagaggc tatcgcctgc taaaatagct gtcgcttcgt caaatttctt atgattggtg
     6361 agtcgacctc tacggtaatc atcatcatcc atggcaggaa gatcatcgtg aatcaggctt
     6421 cccgtatgaa tcatctctaa ggcagcggcc acttggtagt gggcttgctg taattcgacc
     6481 ccaaatcctt ccacgatttg aagcaataag accggtcgaa tccgctttcc accaccatca
     6541 atcgaataca aaatcgcatc aattaattct tccgaaacaa ttgttccacg gttgtaataa
     6601 aaatcgcgaa tttcctgatc aatccgtttc acatcaacca ttaatccatc tccgcttcac
     6661 tgccatccgc ctgcatgacc ttgaccaagg tcttttcagc ttctgctagt gtcttttgta
     6721 ggtctttcga taggaccatt cctttttgaa actcggcaag tgcttcttcc agagccacat
     6781 cgcctcgctc caatttggtt acgattcctt ctaattcagc taagttttct tcaaatgttt
     6841 ttgtctgttt ggacatgttt tacctccaca tcaagttgac catccttcat ctggatggtt
     6901 aggttttcac ccatttgtac attttctaca ctatcaatca cccgaccatc ttgacgaatc
     6961 atggcgtagc cacgggccac gatgcgactg gtatccagca tagtcaaggc ctcaatcagc
     7021 ttgtccgcct tggccatctt attgtcatag atattagcca tattgctctt caagagtcgt
     7081 tcctgctgga taattctctc ttggaaactc tcgactttac ggccaagttg taggccttgt
     7141 aaacgttgat tgagtaataa gctagcctgt ttctgctggc tatatacttc tttcatccgt
     7201 atctgcaatt gattggtcaa gcggtctaat ttttgcaaat aaccatcata caagcgttca
     7261 ggctggcgga acatgactga ctggctaatt ttctcaagct gacctcttag gaatctcaaa
     7321 cgattggtca tggcctgata ggctctattt tcctgctgat tgaggtagcc cagcaagtct
     7381 gccttggtca caggtgttgc taattctgcg gcagctgttg gggtagcagc tcgtttatct
     7441 gctacaaaat cagccagagt cgtatcagtt tcatgaccta cgctggaaat gataggaata
     7501 cgggattcaa aaatagcccg aaccacaatt tcttcattga aagcccacag gtcttcaata
     7561 gaaccaccac cacgaccaac aatcagaaca tccaagtcat cccgttcatt ggctctttgg
     7621 atattggcaa caacctcctg agcagcacca tctccttgca ccttggtcgg atagagaaca
     7681 atctctacgc ctggaaaacg tcggctaacg gttgtaataa tatcctgaat aacagctcca
     7741 ctcggactgg taatgacacc gattttcttg gtaaaccgtg gcaaggcttg cttgaattct
     7801 tctttaaata agccttcctg tgtcagagct tgtttgagct gttcaaactt gattgccaag
     7861 gctccaatac catctggctc agctttttca atgacaatgg aataagaacc atttggttca
     7921 tagagctgaa tgcgcccaat gacattgatt ttcattccct cttcaagctc aaagcccaga
     7981 ttcttataga cgcctgccca catggtcgct tggatgactg ccttgtcatc cttgagcgaa
     8041 aaatattgat ggctagggcg tttacggaag ttggacactt gacctgtcaa atacaccttc
     8101 tccaaatacg gatcgcggtc aaactttaat tttaaatact tagttagatg actaaccgat
     8161 aaatattcaa ccatgtccac tccttctata ttctatccct actattatac caaattttgc
     8221 acttttatac agaactaggc ctattatttc cgatagcttt cctgtgtttt ttctgcgttt
     8281 tactatataa tagcttgtga gaaaataaga acttgttgac aggttctaag gagatttata
     8341 tgaaaattga tgatttgcga aaaagttcta acattgagga ccgcagggga caatccagtt
     8401 ctaactcatc tttctcgtct ggttcatctg gcggaaatgc tctattggga ctactctttt
     8461 cacgacttgg ttggaaagga aaactacttg ttcttgtcct tttagtagcc ttcggaggca
     8521 tgtcaaacct tggtgggctg ctttccccat caacagggac taatccttac caatcgagtc
     8581 aagtcacaac gactggtaca gatgtgtctg atgcagatgc tgaattcatg agtaaggttt
     8641 taggatcgac agaagatttt tgggtccaag aatttaaagc caatggttta aactacaatg
     8701 caccgactat ggttttctat actaaccaga cccaaaccgg gtgtggagtg agttccgccc
     8761 aagccggtcc attctattgc tctgctgacc gcaagattta tattgatact tctttctatc
     8821 aagaattgtc tagcaagtat aaggctgctg gtgactttgc cacggcttat gtcatcgctc
     8881 atgaagttgg tcaccatgtt caaaatgaat tagaagttct tggggcctac catcaaaaac
     8941 gggctcaact atccgataag gaaggcaatg cgctaaatgt tcgcttagaa ttgcaagctg
     9001 actattatgc aggggcctgg gccaaatatg ttgatggaca aggcatcttg gatgctggtg
     9061 atattgacga agctatgaat gctgcccatg cagttggtga cgatactctt caacaggaag
     9121 cctacggccg tactgttcca gacagtttta cccacggtac ttctgagcaa aggaaaaaat
     9181 ggtttaatct cggttatacc tatggtgacc ttgcccacgc cgatacattc tccgtagaga
     9241 aaccgtaaac atccatagcc tctcgtagca ataaagaaac tcttgcaaca tacacttttg
     9301 caagagtttc tttataatat acaactgaca gaagccaatt tacacatacg gtaccacttt
     9361 taaatatgaa aactgaatca tgtaaactta ctcatcaact ctaattagag cggtatccta
     9421 gtttcaaaca atatcacaat tattatttag caaactttaa ttatttccag ttatctctgc
     9481 tacagactgc acagttccgt ttggaataat cactgttttc aacaagttat tttcctcgtg
     9541 aatacgtctg tataagataa ccatgtagac tggaaataag atgagaaaac tatatgttgc
     9601 atgacacaat aaagctaaac cgattaattc tggtataata tttaggaaat agttaggatg
     9661 ctttacaaca cgaaacaacc aatgatcaac aaaacgatga tcttttacca acatgagctt
     9721 aactgtccaa atatcaccta acaatcgtgt tacccaaaat aacattccca ttgaaaacag
     9781 caagaatatc aaacctaagc tactaagcgt atcaaacttg gcgtgtcgca ctactgcttc
     9841 aaccaaacat gataaataaa atagaatatg tacaactgtt aataatttag tattttgaac
     9901 accaaattct gaaccgccgt ttttcaaaat ccgtttttcg tttttaatgg aaatcttcaa
     9961 aaaatagatt ctcaccaaaa aaatacaaat aaccaaaaaa acaaccataa atccctcctg
    10021 tattttaaca gattttatca aacacattca ttatacaagg ttagactgtc gccattctat
    10081 tcctctcctg tttttttcct attttccatt tgagactaca ataaaagaga cctgttttca
    10141 aaaatggatg aaatcatgtc tcttttatag tcttttagtt tatactcaac aaaaatcaaa
    10201 agcaaaccag tcaagtgttt ttaaaccatt gtctactaac aattggtttt aaaatagacc
    10261 aatctaactc tcgtattact tcttgaagct tgtttatcac atcgtctagt gttttaaaag
    10321 ctttattctt aaaccctctc tttcgaatct cagcccaaac ttgttcaatt ggattcattt
    10381 caggagtata gggaggaata aactcaaaac caatattatg tggtttctct aaggtacttg
    10441 atttatgcca aacggcattg tccatcacta ataaaatata atcgtcagga taagcttcag
    10501 atagttgttt gagaaaaaca ttcatccaat ctgtattaca gcccccagcg ataatgaaga
    10561 aggactctcc tgtatgggca tcaacagcac catagcaata gcgatactca cgaatatagt
    10621 gactatgtac atgcggtctc accccttttg gtgcccaggc cttcccaatt ttactgatcc
    10681 gaccgaaacc cgcctcatct tgatacatta gcctgacttt atgatagcga cgactattct
    10741 tgaagcgctt tcctgttttc gtgaatgaag attttatttt tagacgctag aatcgtttcg
    10801 gcgtctgctt ttttagggtg ttctggtctt ggcgtcactt tgcgccaacc atggcgttta
    10861 agaatggcat agaatccttc cttggtcgta gggtgtccaa cccgtttctg ataagcttca
    10921 tagagagagt ttatcgtcac aaattcgcca tttagtgagg ctgttaactg ttcttttaga
    10981 aacgcttcct cttcttgaag ggttaaatat tgacggttcc gtccacctcg cgtttctctt
    11041 actagagctg aaatcccctc aagttcgtac ttgcgctgta aggaccagat tgtatacttt
    11101 gaatagccga tgaggttagt gatttcctta tagctaagac cttctgctct gaacaagata
    11161 acttgaagtc gtctatgaaa tggagaatag gttttatctt tcaaataagt ttttaattct
    11221 ttcgtttgtt cgatagtaag tttcataaat ctattatagg ttagtttttg ttttttgaat
    11281 agtattactt ttagtactcg ctccaaaggt ttggggaacc tttggaggtt ggagataggg
    11341 cgaagcaagt tcgcttca
//
LOCUS       DASFQS010000073        11215 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.075, whole genome shotgun sequence.
ACCESSION   DASFQS010000073 DASFQS010000000
VERSION     DASFQS010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11215
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.075"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            93..959
                     /locus_tag="U1041_001634"
     CDS             93..959
                     /locus_tag="U1041_001634"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEM4768738.1"
                     /translation="MALFRKKDKYIRINPNRSRIESAPQAKPEVPDELFSKCPACKVI
                     LYKNDLGLEKTCQHCSYNFRITAQERLALTVDEGSFEELFTGIETKNPLDFPNYLEKL
                     AVTRQKTGLDEAVLTGKATIGGQPVALGIMDSHFIMASMGTVVGEKITRLFELAIEER
                     LPVVLFTASGGARMQEGIMSLMQMAKISAAVKRHSNAGLFYLTVLTDPTTGGVTASFA
                     MEGDIILAEPQTLVGFAGRRVIESTVRENLPDDFQKAEFLQEHGFVDAIVKRQDLPAT
                     ISRLLRMHGGVR"
     gene            956..1729
                     /locus_tag="U1041_001635"
     CDS             956..1729
                     /locus_tag="U1041_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HEM4768739.1"
                     /translation="MTSDVARMIRLARDQARLTTLDYATQVFDDFIELHGDRNFRDDG
                     AVVGGIGFLAGQPVTVIGIQKGKNLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPV
                     VTFINTAGAYPGVGAEERGQGEAIACNLMEMSDLKVPIIAIIIGEGGSGGALALAVAD
                     QVWMLENSMYAVLSPEGFASILWKDGSRAMEAAELMKITSYELEKLQVVDRVVLENGR
                     ATKEVLSDIKENLVSQLDQLQALPLDQLLENRYQRFRKY"
     gene            1793..2253
                     /locus_tag="U1041_001636"
                     /pseudo
     CDS             1793..2253
                     /locus_tag="U1041_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938864.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            2264..2929
                     /locus_tag="U1041_001637"
     CDS             2264..2929
                     /locus_tag="U1041_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4768740.1"
                     /translation="MLETFSQRLEWICRKIWILLQAFLLLLLELIPTFILQKSTSPVA
                     QWTAGLSSIGIMVFMCWLAERKGLAIWDRKFLTWKGLGLVALTVLFTSLSTVLGHTIM
                     DLQGIEDTANQIGIDKLLRMIPFGLAFVRIACQAAISEEIIVRGYLFKKFFEKHKILG
                     IVVSGLVFAFLHGPTDLGSWIIYASPGFILAYLYYKTDYLIYPIAVHFINNAWAVLAF
                     YYL"
     gene            3163..3828
                     /locus_tag="U1041_001638"
     CDS             3163..3828
                     /locus_tag="U1041_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4768741.1"
                     /translation="METVSKGMRWFGQKLWILLRVFGFMMMIVLPDAILEVSTSQLAQ
                     WGAALLIVGILVLMYWRAEKNGITIWDRSFLTWKGLGLVVLTFAVAQLFKHLGYYIME
                     LQGIEETGNELELIKLLENIPFWLALINMACLPAISEEIIVRGYLFKKLFEKYKILGI
                     VVSGLIFAFLHGPTDLGSWIIYASPGFLLAYLYYKTDYLIYPIAVHFINNAWAVLAFY
                     YFQ"
     gene            complement(3909..4835)
                     /locus_tag="U1041_001639"
     CDS             complement(3909..4835)
                     /locus_tag="U1041_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4768742.1"
                     /translation="MNLSKEKQLFHHYYANWLRIYKEGAIREVTLKKYRMTLQWLIRL
                     APSLLLEDLNRVRYQELINSYAKTHERQTTMDFHHQLKGAILDAVDEGIIERDPTRKV
                     IIKGRLPRKKKTKYLNQFELHQLIQELRLGEELNWDWLILLIAKTGIRFSEALALTTQ
                     DFDFHRQLLTIDKTWNYKGDGGFLPTKNKSSIRKIQLDWQTSTQFANLLQHAQPDDLL
                     FVKKERIYNSTINAILEKRCLSANLPVITIHALRHTHASILLFAGVSIASVARRLGHA
                     SITTTQKTYLHIIRELENQDVDLIMRSLSGLC"
     gene            4930..5532
                     /locus_tag="U1041_001640"
     CDS             4930..5532
                     /locus_tag="U1041_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4768743.1"
                     /translation="MKNFKERKIMKLEELALFTGGSLQVRLDTTSWEDARDYILYNQQ
                     HHQLDGYEVIEEVIDSRTVTTDREVTLLEEGDLLFSLLSGKAVLVRAEHAGLLYTQNY
                     IKIEPIAKLDKAFLLYLINESSAIRRQFYQSLQGSEVMKYTVKQLKSLQLGALPPLDS
                     QQKLGKIYLDGLVLRQKRQAYAQGDFLRLTYLLKEVYAHE"
     gene            5525..8731
                     /locus_tag="U1041_001641"
     CDS             5525..8731
                     /locus_tag="U1041_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEM4768744.1"
                     /translation="MNELAFETELIQYITTGTITQPEHLEGLEWSVSDSSPLYAVKSK
                     LWTYEPSIKTTEQLWENFRNILWQHNQHRLDKPLSDTEFAQVKQIISNLKTPYEAGQF
                     LYGISGVSELEITLDDGRHTFLTVFDQRKIGGGDTVYQVVNQIRRAPKIPGRRECIFD
                     TTLLINGLPIIQIEEKKDTVDVDKALNQMHQYIQERQYTDIFSTLQILVAIAPNNVRY
                     MANTTAEKFNKDFAFHWQRKSDGSKVRNWKEFADSMLSIPMAHQMATNYMILDGTPQK
                     QMLKVMRPYQVYATQAVIEGVKKVDFELGCNKVGYIWHTTGSGKTITSFKTAWLASRM
                     PKVDKVVFLVDRIALTNQTKDDYLAYDPEAGENSFGSIRETQNTTALARQLTSKDSGI
                     IVTSVQKLDTLVKRKSFKSPDKHIVFIVDEAHRSTGGDSFAGIQKAFKKAAWIGYTGT
                     PNLDDTGASLRTQDIFGPLLHAYTIKNAISDRNVLGFKVDFETTIDQEKLKTTYLPDF
                     YRQKYPKWTSAQIEEKIANLSPDDMDDAVTSSIYDENPEHVRLVVEDVFKHWANRSCS
                     GRYNALFTTHVGGGRASTPMAMMYFREFQRINQLHREQGGLVLKVGVTFALNTQNNDS
                     MVESNTGLLEAITIYNAEFGTSFGLSDVASYTEDLVSRLNRTAKDKNYLDLVIVVDQL
                     LTGFNAPELNTLYVDRTLKGASLIQAYSRTNRVEDMDKKPFGRVVNYRWPAHNEKLMN
                     QALAIYADDSAADLSDAEQKNNNEKNGLVAKPFKDVFAEVKQTVDQLRELTGDFNDIP
                     KSEKKREAMLELLRAYNQGLSKLKQYQPEEVDGVIEGFDYNQPDRFIESLGMSVEEEK
                     LLTTVLANELKRTLAKEQKVSIHQIELKMTHIKEVTIDYDKLTELVELLLNQVHEEKM
                     VEAAATRDELDRFASGLEDLNYADQIRQTGDAIYRGDFPTQDMNFAYPVKGIDSQKII
                     QEASHVYIDKKLFAFRIQWGLTEHIRNQELRELLARHRYGQNDLDDTGHLRTLIKEAS
                     RDYQAWAEDDAVKGLSKIQYRNQLRQALYDLADDLVGQ"
     gene            8839..10062
                     /locus_tag="U1041_001642"
     CDS             8839..10062
                     /locus_tag="U1041_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4768745.1"
                     /translation="MTKEKSTVPRLRFPGFTDAWKQRKLGEVAEMYSGGTPSVGRKDY
                     YAGGIPFIRSAEINSDTTELYLTELGLNNSSAKMVSKGSLLYALYGATSGEVGLSRLD
                     GAINQAILAILPNDDLTTEFLMYWLRREKSIIVEKYLQGGQGNLSAGIVKQLAPTFPT
                     LPEQEAIGSFFSDLDQLITLHQRKLDDVKELKKALLQKMFPKGNGNDFPELRFPEFTD
                     AWKQRKLGEVVSISSGYTGDASLSNGKYKLTRIETISDGNVDVSRTGFSNELPDEKYR
                     LKFGDILFSNINSLAHIGKVAIFNIGEEVFHGINLLRLVPKQDLINPYFIYYQLVTES
                     KKNWSKSHANQAVNQASINQTSLSIQKISLPTLPEQEAIGSFFSDLDQLITLHQRQLD
                     HLKLLKKALLQQMFI"
     gene            10075..10743
                     /locus_tag="U1041_001643"
     CDS             10075..10743
                     /locus_tag="U1041_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4768746.1"
                     /translation="MTYSQDYLDDLLVRMAYHSSGIEGNTISLPETVSIILESTLPGK
                     HKSIREFYEIENHKQAFQALLFALDNGEELSLGLVKDIHALLMDRLQHDRGQFKSVQN
                     AIIGATFKTASPEETPFLMQQWVDNANYRLGLPLEIAELLEVLADVHIQFERIHPFSD
                     GNGRTGRLILMFQSMLKLGAPVLISKEDRALYMELLAEQDVTGLSQLLKRSLEFEQER
                     KDQF"
     gene            11001..>11215
                     /locus_tag="U1041_001644"
     CDS             11001..>11215
                     /locus_tag="U1041_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002409202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4768747.1"
                     /translation="MYGKLDFLNQAFGIIPPELDGYESTLDSPAFDLLKGINGQFLLE
                     FVSRKEFYYYQGNIANGSRKAKRIHTET"
BASE COUNT         3334 a         2067 c         2621 g         3193 t
ORIGIN      
        1 tatgaatggt cgagttcttt cccactccct cattcgtcga agtaataaaa gtcaactaaa
       61 tgacgataaa aaaagtaaac taggagaatg ctatggcttt gtttcgcaaa aaggacaaat
      121 atatccgcat caatcccaat cgttcgcgga tagagtcagc acctcaagca aagccagagg
      181 tgccagatga actcttttcc aaatgtcctg cttgtaaggt catcctttac aaaaatgatt
      241 tgggattaga gaaaacctgt caacactgtt cctataattt tcggattaca gcccaggaac
      301 gcctggctct aacagttgat gaaggctcgt ttgaggaatt gtttacaggg attgaaacaa
      361 aaaatccctt ggacttcccc aattatttag agaaattagc agtcacccgt caaaaaacgg
      421 gcttggatga ggctgttttg acaggtaagg cgaccatcgg cggacaacca gttgcccttg
      481 gtatcatgga ttcgcacttt atcatggctt caatgggaac agtggtcggt gagaaaatta
      541 cccgcctctt tgagttggcg attgaagagc gtttgccagt tgtcctcttt accgcatctg
      601 gcggtgctcg gatgcaggaa ggcattatga gtttgatgca aatggccaag atttcggcag
      661 ccgtgaaacg ccattccaat gctggtctct tttacctgac ggtcttgacg gaccccacaa
      721 caggaggtgt gacagctagt tttgctatgg aaggcgatat tatcttggct gagccgcaga
      781 ccttggttgg ctttgcaggc cgtagggtta ttgagtcaac tgtgcgtgaa aatctgccag
      841 atgatttcca gaaggctgaa tttttacaag aacatggctt tgtcgatgcc attgtcaaac
      901 gacaggactt gcctgcgacc atcagtcgct tgttgagaat gcatggaggt gtcagatgac
      961 cagtgatgta gcacgtatga tccgtttggc acgtgaccaa gctcgcctga ccaccttgga
     1021 ctatgccaca caggtttttg atgattttat agaattgcac ggtgatcgga atttccgtga
     1081 tgacggagct gtagtgggtg gtatcggctt tttagcaggt cagcctgtga cagttatcgg
     1141 tatccaaaaa gggaagaatc tccaagacaa cctcaaacgc aacttcggtc agccccaccc
     1201 tgaaggctac cgcaaggccc ttcgtcttat gaaacaggcg gagaagttcg ggcgtcccgt
     1261 tgtcaccttc atcaatactg ctggagccta tcctggtgtt ggtgccgagg agcgaggaca
     1321 gggtgaggcc attgcctgta acctcatgga gatgagcgac ctcaaggtgc ccattatcgc
     1381 tattatcatc ggcgagggcg gctctggtgg agctctggct ctagcagtcg cagaccaggt
     1441 ctggatgctg gaaaactcca tgtacgccgt ccttagcccc gaaggtttcg cctctatcct
     1501 ctggaaagac ggtagtcggg ccatggaagc agcagaactc atgaagatca cgtcatacga
     1561 gttggagaaa ctccaagtgg tcgatcgggt tgttttggaa aatggcagag cgaccaagga
     1621 agtcttgtct gacatcaagg aaaacctggt cagccagttg gatcagttac aagccttgcc
     1681 acttgatcaa ctactcgaaa accgctatca acgctttaga aaatactagg aagacctagt
     1741 atttttttga tagatttgat acaatggata aaataatttc aggaggtttt ccatgttagt
     1801 aaaagcagat ctatcaaacg cagaagaatt gctacctatt cagcaccgag catttgcggc
     1861 tttatatgaa acctatcagg accagtacaa cccagccatt gaaaccatgg actatttcca
     1921 gtcacgcttt gcacgaccaa attgcaccta ctacaagatt gttgaggaag ggcacacagt
     1981 cggtttagtg cgaacaacgg tcgctgaaga tgctgaccag ggctggctag gcctgattgg
     2041 cattgatcca gaccataggg gaaaaggcca tggtcataag gctatgttag agttagaaca
     2101 actttatcca acggttaaga ggtgggtgct ctgtacggtt ttgcaggagc ctaaattggt
     2161 ctctttctac gaaaaactcg gctacaaggc aatcaaaacc gagcctgagc agaaggcatg
     2221 gatatggtct atatggagaa gtggatagga taggaggtta gaaatgctag aaacattcag
     2281 tcaacgattg gaatggattt gtaggaaaat ctggatttta ctgcaggcct ttctattatt
     2341 gcttctggaa ctcattccaa ctttcatatt gcaaaaatcc acctcgccag tcgctcaatg
     2401 gactgccggc ctatcttcta ttggaataat ggtctttatg tgttggttgg cagaaaggaa
     2461 agggcttgcc atttgggata gaaaattcct gacctggaag ggacttggat tggttgcact
     2521 gaccgtacta tttaccagcc tttctactgt cttagggcat actatcatgg accttcaagg
     2581 gattgaagat acggctaatc agattggtat tgacaagctg ttgcgaatga ttccctttgg
     2641 gttagccttt gttagaattg cctgtcaggc agcgatttca gaggagatca ttgtcagagg
     2701 ctatctattc aaaaagtttt ttgaaaagca caagattttg ggaattgtgg tgtctggttt
     2761 ggtatttgct tttctgcatg gaccaacaga tttgggctct tggattattt atgctagtcc
     2821 aggttttatc ttggcttact tgtactataa gacagattat ctgatttacc caatagcagt
     2881 tcatttcata aataatgctt gggcggtgct ggctttctac tatttataaa acttcaataa
     2941 aatatagctc ttgaaagctg gaagaatgcc ctcttaacta accttgttag gcactatcag
     3001 attttcctat tggataatta atcaacgctt tagaaaatac taggaatact tagtattttt
     3061 tattggtttc tattgacaaa cattctgtat cattgtatta taagtgtatt gcaaaagcta
     3121 attacataat cctttgatta tgtatcagaa taggagattg atatggaaac agtcagtaaa
     3181 ggtatgagat ggtttggtca aaaactttgg attttactaa gagtttttgg cttcatgatg
     3241 atgatagttc ttccagatgc aattttagag gtatctactt cgcaattagc tcagtgggga
     3301 gcagccttgt tgatcgttgg gatccttgtc cttatgtact ggagagctga gaagaatggt
     3361 attacaatat gggatagaag ttttttaacc tggaaaggtc ttggcttagt tgtcttaaca
     3421 ttcgcggtag ctcagctgtt taaacacctt ggttattaca ttatggaact tcaggggatt
     3481 gaagaaaccg gcaatgagct tgaattaata aagttattag aaaacattcc attttggtta
     3541 gctcttatca atatggcttg tttgcctgct atttcagagg agattattgt cagaggttat
     3601 ctgttcaaaa agttatttga aaagtacaag attctaggaa ttgtagtatc tggtttgatt
     3661 tttgctttcc tgcatggacc aacagatttg ggctcttgga ttatttatgc cagcccaggt
     3721 tttttactag cttatctcta ctataaaacg gattatctga tttacccaat agcagttcat
     3781 tttatcaata atgcctgggc ggtgctggcg ttctattatt ttcaataagc ataaagaaaa
     3841 gacgattccg tttggagtcg tcttttgcta ttgtcagtac aagccttgtc acgatagaga
     3901 taggaatgtc aacaaagtcc tgacagtgac cgcataatta aatcaacatc ttggttttcc
     3961 aactcacgaa tgatatgaag ataggttttc tgggtcgttg ttatgcttgc atgaccaagt
     4021 cgtctagcaa cacttgcgat agaaaccccg gcaaataata aaatagatgc atgggtgtgt
     4081 cgcagggcgt gaatggtgat gacaggaaga tttgcactta gacaacgctt ttcaagaatg
     4141 gcattgatgg tagagttgta aatccgctct ttcttcacga aaagtaggtc atcgggttgg
     4201 gcgtgctgca ataagttggc gaattgggtg ctggtttgcc agtcgagttg gatttttcga
     4261 attgaagatt tattttttgt aggtaaaaat ccgccgtctc ctttataatt ccatgtttta
     4321 tcaatggtca atagttgtct gtgaaaatca aaatcttgag tagtgagagc aagggcttct
     4381 gagaatcgaa tacctgtttt agcaattaat aagatgagcc aatcccaatt cagctcctct
     4441 ccgagacgta attcttgtat caactgatga agttcaaatt ggttgaggta ttttgtcttt
     4501 ttctttcgag gaagtcttcc tttgataatc accttacgtg tcgggtctcg ttcaataatt
     4561 ccttcatcta cagcatctaa aatagctcct ttcaactggt gatgaaaatc catggttgtc
     4621 tgtcgttcat gtgttttagc atagctgtta atcaattctt ggtaacgaac ccgattcaaa
     4681 tcttccaaca acagactagg agctagtctg ataagccact gcaatgtcat tctatatttc
     4741 ttgagagtga cttctcgaat ggctccttcc ttgtaaatcc gtagccaatt tgcataatag
     4801 tgatggaaaa gctgtttttc ttttgataag ttcatggcag aacctccttt ttaattttta
     4861 aaaattacat aatttattga cagatttccg aggagatgct atacttattt tagcgaaaaa
     4921 aatgtaatta tgaaaaattt caaagaaagg aaaattatga aactagaaga attggctctc
     4981 tttacgggag gtagtttaca ggttcgcttg gatactacta gctgggaaga tgctagagac
     5041 tatatcctct acaatcagca acatcatcaa ttggatggtt atgaggtgat agaagaagtg
     5101 atagatagtc ggaccgtgac gacagataga gaagtgacct tgctcgagga gggagactta
     5161 ctctttagtt tactatcggg gaaggctgtt ttagtgagag cggagcacgc aggcttactc
     5221 tatacacaga actatatcaa aattgagccc attgcaaagc tggataaggc cttcttactg
     5281 tatctgatta atgaatcctc ggctattaga cggcagtttt accaaagctt acaggggagt
     5341 gaggtaatga aatatacagt caagcaactg aaaagtttac agctaggcgc cctgcctcct
     5401 ttagatagtc agcagaaact aggaaagatt tatttagatg gattagtctt acggcagaag
     5461 cggcaagctt atgcgcaagg agatttttta cggctaacat atttgttaaa ggaggtttac
     5521 gcacatgaat gaattagcat ttgaaacaga attgattcaa tatattacga caggtactat
     5581 tacacagccg gagcacctag aaggtctaga atggtctgtt agtgattctt cgcccctgta
     5641 tgcagtcaaa tctaaactgt ggacttatga gccgagtatc aagacaacgg agcaattatg
     5701 ggaaaatttt cgtaatattc tctggcaaca caaccaacat cgattggaca aacccttgag
     5761 cgataccgag tttgctcagg tcaagcagat tatttcaaat ctgaagacac cttatgaggc
     5821 tggtcagttt ttatatggaa ttagcggtgt ttccgaattg gaaattacgc ttgatgatgg
     5881 acggcataca tttttgacag tattcgacca acgtaagata ggcggtgggg acactgtcta
     5941 ccaagtggtg aaccaaatcc gtagggctcc taaaatccct ggacgacgag aatgtatatt
     6001 cgatacaacc ttgttgatta atggcttacc tattattcag attgaagaga aaaaggatac
     6061 ggtagatgtg gacaaggcat tgaaccaaat gcaccaatat atccaggaac ggcaatatac
     6121 ggatattttt tctaccttgc agattctagt cgctatcgcc cccaacaatg ttcgctatat
     6181 ggccaatacc actgcggaaa aatttaataa ggactttgct ttccactggc agcgtaaatc
     6241 tgacggtagt aaggttcgga attggaaaga atttgcggat tccatgctca gcattcctat
     6301 ggcccatcag atggcgacca actacatgat cttagacggg acaccgcaga aacaaatgct
     6361 gaaagtcatg cgtccctatc aagtttatgc cactcaggcg gtcattgagg gggtaaaaaa
     6421 agtcgatttt gaactaggct gtaacaaggt tggctacatc tggcatacga caggctcagg
     6481 gaagacgatt actagtttta aaacagcttg gctggcaagt cgaatgccca aggtagacaa
     6541 ggttgtcttt ctagtggatc gtattgcttt gaccaatcag actaaggatg attatctggc
     6601 ttatgatcca gaagctgggg agaatagttt tggtagtatt cgagaaactc aaaataccac
     6661 agccttggca cggcagttga ctagtaagga tagtgggatt atcgttactt ctgtgcaaaa
     6721 attggataca ctggtgaaga gaaaatcctt caaatcacca gataagcata tcgtgtttat
     6781 cgttgacgaa gctcatcgct caactggtgg agatagtttt gcagggattc aaaaggcttt
     6841 taagaaagcg gcttggattg gctatacagg aactcccaac ttagatgata caggtgctag
     6901 tctgcggacg caagatattt ttggccctct tcttcatgcc tacactatta aaaatgccat
     6961 tagtgaccgc aatgtgctag ggtttaaggt ggattttgag acaaccattg atcaggaaaa
     7021 actaaaaaca acttacttgc cagattttta tcggcaaaaa tatccgaagt ggaccagtgc
     7081 acagattgaa gaaaagattg ccaatctaag tccagatgat atggatgatg cggtgacttc
     7141 tagcatctat gacgaaaatc cagagcatgt tcgattggta gtcgaagatg tcttcaaaca
     7201 ctgggcaaat cgctcttgca gtggccgtta caatgcctta ttcaccaccc acgtaggtgg
     7261 aggcagggcc tccacaccca tggctatgat gtatttccga gagtttcaac gaatcaatca
     7321 actgcatcga gagcaaggag gtctggtctt gaaggtggga gtgacctttg cattgaatac
     7381 tcaaaataat gatagcatgg tcgagtcaaa tactggtttg cttgaagcta ttacgatcta
     7441 taacgcagaa tttgggacat cctttggctt gtcagatgtt gcttcttata cagaggacct
     7501 ggttagtcgc cttaatagaa cagccaagga caagaactac ttagatttgg tgattgtcgt
     7561 ggatcagttg ttgacaggtt tcaatgctcc tgagctcaat actctttatg ttgaccgaac
     7621 ccttaaagga gccagtctta tccaggccta ttctcgtacc aatcgtgtgg aggatatgga
     7681 taaaaaacct tttggacggg tggtcaatta ccgctggcca gctcataatg agaaattgat
     7741 gaatcaggcc ttggccatct atgcagatga tagtgctgcc gatttatcag atgcggaaca
     7801 aaaaaataac aatgaaaaaa atggactggt ggctaagcct ttcaaggatg tatttgctga
     7861 agtcaaacaa acggtcgacc aattgagaga gttgacgggt gatttcaatg atattccgaa
     7921 gtctgagaaa aagcgtgagg ctatgttaga attgctccgt gcttacaatc aaggattgtc
     7981 taagctgaaa cagtatcagc cagaggaggt tgatggggtg attgaaggat ttgattacaa
     8041 tcagccggac cgctttattg aaagtttggg aatgtctgta gaggaagaaa aacttttgac
     8101 gacagtctta gccaacgaat tgaaacggac cttggcgaaa gagcaaaaag ttagcattca
     8161 ccaaattgaa ctcaagatga ctcacattaa ggaagtgaca attgactacg ataaattgac
     8221 cgaactggtt gagctcttgc tgaatcaggt tcacgaagag aagatggtag aagccgcagc
     8281 taccagggat gaattggata gatttgcaag cggtttggaa gacctcaact atgctgacca
     8341 gatccgacaa acaggggatg caatctatcg aggtgatttt ccgacacaag atatgaactt
     8401 tgcttatcca gtcaagggga ttgatagtca gaagattatc caagaagcat cgcatgttta
     8461 cattgacaag aagctctttg ctttccgaat ccaatggggc ttgacggaac atatccgcaa
     8521 ccaagaacta cgagagttgt tggcgagaca tcgatatggt cagaatgact tggatgatac
     8581 cggacactta cgtaccttga taaaagaagc tagtcgcgat taccaggcct gggcagaaga
     8641 tgatgctgtt aaaggcttga gcaagattca gtaccgtaat cagttgagac aagcactata
     8701 tgatttggcc gatgacttgg ttggtcaata ggttgcgatt ttgttggatg atagcgtata
     8761 atagaatgga aatcgtccga aaaattgcaa aaataacttt caaaaatgaa acaaaaagaa
     8821 agtagaaaag gagggactat gacaaaagaa aaatcaacag taccacgatt gcgcttcccc
     8881 ggatttacgg acgcttggaa acagcgtaag ctgggggagg tggcggagat gtattctgga
     8941 ggaacaccga gtgtcggacg gaaagattat tatgctgggg gaattccatt cattcgttca
     9001 gctgaaataa atagtgatac aacagagttg tacttgacgg aattaggttt gaataactca
     9061 tctgcaaaaa tggtttcgaa aggaagtttg ttgtatgcat tgtatggtgc aacaagtgga
     9121 gaagttggtc tatcaaggtt agatggagcg ataaatcaag cgattctagc cattttgccg
     9181 aatgatgact tgacaacaga atttttgatg tattggctac gtagagaaaa atcaattatt
     9241 gttgaaaaat atttacaagg ggggcagggt aatttgtctg ctggtattgt aaagcagtta
     9301 gcgcccacct tccccaccct ccccgaacaa gaagccatcg gtagcttctt ctccgaccta
     9361 gatcagctta ttactcttca tcagcgaaaa ttagatgatg ttaaagaatt gaagaaggct
     9421 ttgttacaga aaatgtttcc gaaagggaat ggaaacgatt ttcctgagct aagattccca
     9481 gaatttacgg acgcttggaa acagcgtaag ttgggggagg tggtatctat ttcatctgga
     9541 tacaccggag atgcttcatt gagtaacgga aagtataagt taacaagaat tgaaacaatt
     9601 tctgatggaa acgtggatgt atcaagaaca ggattttcaa atgaactacc tgatgagaaa
     9661 tatagattaa aattcggaga tattctgttt agcaatataa attctttagc tcatattggt
     9721 aaagtagcaa tatttaatat cggagaagaa gtatttcatg ggatcaattt attaagattg
     9781 gttccaaaac aagacttaat aaatccatat ttcatttatt atcagttagt aacggagtca
     9841 aagaaaaatt ggtctaaatc ccatgctaac caagctgtga atcaagcaag tataaatcaa
     9901 acttcgttgt caattcaaaa aatctccctc cccacgctcc ccgaacaaga agccattggc
     9961 agcttcttct ccgacctaga tcagcttatt actcttcatc agcgtcagtt ggatcatctg
    10021 aaactgttga aaaaggcgct gttacagcag atgtttatat agaaagaggt cagtatgaca
    10081 tattcgcagg attatttaga tgaccttctg gtacgaatgg cctatcattc cagcgggatt
    10141 gaggggaata ccatttcact gcctgagacg gtttcgatta ttttggaaag cacgctacct
    10201 ggcaagcaca agagtatccg tgaattttac gagattgaaa atcacaaaca agccttccaa
    10261 gctctgctat ttgccttaga taatggggaa gagctgagtt tgggactggt taaggatatt
    10321 catgccttgt tgatggaccg cctccagcat gatcgggggc agtttaagtc ggtacaaaac
    10381 gctattattg gtgcgacctt caagactgca tcgccagagg aaacgccttt tcttatgcaa
    10441 cagtgggtgg acaatgccaa ctatcgcttg gggttgcctt tggaaatagc agagctgtta
    10501 gaggtgctgg cagatgtgca tattcagttc gagcgtattc acccatttag tgatgggaat
    10561 ggtcggacag gacggctgat tttgatgttt caaagtatgc tcaaattggg agcacccgta
    10621 ctgattagta aggaagatcg agctctttat atggagttgc tagcggaaca agatgtgact
    10681 ggattatccc aattactcaa acgctccttg gagtttgaac aagaacgaaa agaccagttt
    10741 taagtcgatt tttcagaaag cgactttcaa ttggaactat tatttttgcc tgaaaatgca
    10801 atgaaagccc tactttcaca actacttgga aacagcgtaa gttgggggag tttatgaaag
    10861 aaagtaaaat tttaggtagt aaaggagata tagcaaggaa gttaactgta agattatggg
    10921 ggagaggagt tgtttccaag aaagaaattt atagtggtag ttcagctaca cagtattata
    10981 taagaaaatc aggccagttt atatatggga aattagactt tttaaatcaa gcttttggaa
    11041 ttattccacc agaacttgat ggttatgaat caactcttga ttcgcctgct tttgatttat
    11101 tgaaagggat aaacgggcaa tttctgttag aatttgtatc tcgcaaagaa ttttattatt
    11161 atcaaggaaa tattgcaaat ggctctagaa aagctaaaag aatccacaca gaaac
//
LOCUS       DASFQS010000074        11213 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.076, whole genome shotgun sequence.
ACCESSION   DASFQS010000074 DASFQS010000000
VERSION     DASFQS010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11213
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.076"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(75..1445)
                     /locus_tag="U1041_001645"
     CDS             complement(75..1445)
                     /locus_tag="U1041_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007895527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM4768748.1"
                     /translation="MGIARKNFIVVAVMISFISVTLLGLLYYAMPIYYNQVKKQELRH
                     DYMTVAKQLDGMPEAKIISEIDDYDRKTPKIIISLFSSDREIIYPDPNDEMAKKYEKE
                     YLENGDFDEIGSGGVEITSAEGVTYYLLFNYGFHSLSDVSQTLVTFYPFILLLIIVLA
                     VSVAFVYSRLSTRRIARISETTRRMQSLESGISCAVVGTDEITALAQDINSLYSKLLS
                     SIDELRTENERAMAREKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKDHDTYL
                     KKCKEILQEQSELVHSILEATNLDMALKESREQIRLDQLIDSSLTSYQSLAEVKGYQF
                     EVELSPVLIEGNPDYFLKAIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVERVLSD
                     EELDQVFRPFYRPDYSRDKKDGGTGIGLFIVQKILEKHGFPYTFYASDTQTMRFMIHL
                     QSNELI"
     gene            complement(1447..2097)
                     /locus_tag="U1041_001646"
     CDS             complement(1447..2097)
                     /locus_tag="U1041_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4768749.1"
                     /translation="MSRILVVEDDIVISQVVCEFLKEYGYQVESVFDGKVALERFQEE
                     QFDLIVLDIMIPSMTGLEVLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKP
                     FSPTILVKRIENILRGKGDTDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLA
                     KRRGKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLPLKTVVGRGYQIEDT"
     gene            2326..3027
                     /locus_tag="U1041_001647"
     CDS             2326..3027
                     /locus_tag="U1041_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4768750.1"
                     /translation="MWSPKKLTVLKWFDILILTIILFGDGIINSTLQYIALQNQTTTL
                     QENLTFSTMDNYKALALQLVWLTIAIFYLLLRNFDFSIWKKHIFITPWVPLQAVALFI
                     FSALCLDIYHLVSYQFLASNTPSMFQLFPNIDLSLILYSLLNGFYEEIFFLNLCLLVN
                     PKYAKWAFLYSLIIRCSFHTYQGLISALGLGLILGTIFYLLYQKIKPKNLLPFFLAHA
                     VADVIGLTILSYILY"
     gene            complement(3280..3972)
                     /locus_tag="U1041_001648"
     CDS             complement(3280..3972)
                     /locus_tag="U1041_001648"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768751.1"
                     /translation="MTVEEQDIKGSENGENQADKVPNQSANLEEIENVISEPKAEATP
                     EPKVEDSTLSEFTPRAVRSAENNLDMESLPVTPELPNEKQSAYIQDTNYPDKPFQIQQ
                     SVSIEATSVTDKKIEWEVTFKFRDWAFYESIGGYYFIIPDGLKLTKLVDQSNTDILNH
                     YKSEGAGGDEYRAFENGKGEFDAQWGRSAGFMDNAIFNKWKEENRFSKILFRDYRRDV
                     QTVTYKLESVNL"
     gene            complement(4008..4592)
                     /locus_tag="U1041_001649"
     CDS             complement(4008..4592)
                     /locus_tag="U1041_001649"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768752.1"
                     /translation="MKVTYRLKGKILDKSLKNISLVVVMKYFDHQNHLFKQIVSVASL
                     ELTLKKLEQVNPKSNNLDFSNPNTEKAEKKAPSVPEVDKETEAPIEGLKSKDKITVTV
                     KGGENSEITDLDFYYYIYQGNFQRTISAGTTLAEFLKEIAIKEAPLDNDRKPNDVILK
                     KGYRVSKWVDDKNNVIQSDQISRRIRRHQPMQAL"
     gene            complement(4552..4692)
                     /locus_tag="U1041_001650"
     CDS             complement(4552..4692)
                     /locus_tag="U1041_001650"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4768753.1"
                     /translation="MNRQTEIFSLRKSKVGLASVMIALMWFGTVVKVDESNLSVKRKD
                     FR"
     gene            complement(4933..5781)
                     /locus_tag="U1041_001651"
     CDS             complement(4933..5781)
                     /locus_tag="U1041_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HEM4768754.1"
                     /translation="MTVIDGKALGVKMQAALAEKTARLKEEKGLVPGLVVILVGENPA
                     SQVYVRNKERSALAAGFKSEVVRVPDTISESDLLDLIERYNQDDEWHGILVQLPLPAH
                     ISEEKVLLAIDSDKDVDGFHPTNMGKFWSGHPVMIPSTPAGIMEMFKEYQIDLEGKTA
                     LVIGRSNIVGKPMAQLLLDANATVTIAHSRTKNLAELARQADILVVAIGRGHFVTKEF
                     VKPGAVVIDVGMNRDENGKLIGDVKYDEVSEVASYITPVPGGVGPMTITMLMEQTYEA
                     CVRSAK"
     gene            complement(5911..6645)
                     /locus_tag="U1041_001652"
     CDS             complement(5911..6645)
                     /locus_tag="U1041_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019805208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4768755.1"
                     /translation="MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGK
                     STFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMREKMGMVFQQFNLFPNMTVLDNI
                     TLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
                     VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVI
                     VEDGTPEEVFEHTKEERTKDFLSKVL"
     gene            complement(6638..7327)
                     /locus_tag="U1041_001653"
     CDS             complement(6638..7327)
                     /locus_tag="U1041_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4768756.1"
                     /translation="MNFSFLPEYWAYFNYGAIVTLIIAFFSVFFGSILGVLLAFAQRS
                     KYKVLAWTANIYVWIFRGTPMIVQIMIAFAMTHFVAPTFQLGILTVDLTRLIPGIIVI
                     SMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQAMRYVIMPQAIKNILPALGNEF
                     VTIVKDSSLLSTIGVMELWNGAQTVQSTSYIPLTPLVFAASYYLIMTTVLTVIIQSFE
                     KKLNKGGQFHV"
     gene            complement(7453..7683)
                     /locus_tag="U1041_001654"
     CDS             complement(7453..7683)
                     /locus_tag="U1041_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005592360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1797 family protein"
                     /protein_id="HEM4768757.1"
                     /translation="MESHLVRIINRLEAMANDGGTLKRNFERDGIVVAEVAYSYDEEN
                     GSVFTLRDVAARETYAFDSIDLIAMEIYELLY"
     gene            7907..10135
                     /locus_tag="U1041_001655"
     CDS             7907..10135
                     /locus_tag="U1041_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM4768758.1"
                     /translation="MLCKNCNINDATIHLYTNLNGKQQQVDLCHNCYQIMKTDPNNAI
                     LRGLGDLTNPNNMDPFSEFFNHLGGYPGNTPAGKNREQTPPTQAGGHNGRGGQTTPPQ
                     QPQQPNGLLEEFGINVTEIARRGDIDPVIGRDQEITRVIEILNRRTKNNPVLIGEPGV
                     GKTAVVEGLAQKIVDGDVPQKLRDKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN
                     RREIILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGEMQLVGATTLNEYRIIEKDA
                     ALERRMQPVKVEEPSVEETITILKGIQNKYQDYHHVKYSDAAIEAAAVLSNRYIQDRF
                     LPDKAIDLLDEAGSKMNLTLNFIDPKEIDQRLIDAENRKAQATRDEDYEKAAYFRDQI
                     AKYKEMQKATISEEDIPLITEKEIEAIVEQKTNIPVGDLKEKEQSQLVNLASDLKAHV
                     IGQDEAVDKIAKAIRRNRVGLGAPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADS
                     MIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLILLDEVEKAHPDV
                     MHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAMEGRTQSVLG
                     QLSNFFTPEFMNRFDGIIEFQPLSKENLLEIVSLMLDDVNKRLSHNGISLHVTDKVKE
                     KLVDLGYDPKMGARPLRRTIQDQIEDAITDFYLEHPAEKDLRAVMSSKGTIQIKAQTK
                     TK"
     gene            10321..10782
                     /locus_tag="U1041_001656"
     CDS             10321..10782
                     /locus_tag="U1041_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM4768759.1"
                     /translation="MEKIAVFGEKKAGVSYQSRFGVYAVIPDEKKEQIILVQAPNGAW
                     FLPGGEIEKGENHLIALERELMEELGFTAEIGKYFGQADEYFYSSHRDTHFYNPAYIY
                     EVTSYHQIGQPLEDFNHIAWFPVNEAIDKLKRGSHKWGIEQWKLQENSFNN"
     gene            10837..11145
                     /locus_tag="U1041_001657"
     CDS             10837..11145
                     /locus_tag="U1041_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1827 family protein"
                     /protein_id="HEM4768760.1"
                     /translation="MKIINTTNSHPNLVQSQLANTDAFLVETYSAGNTDVIFTQAPRH
                     YELLISNKYRAVQQNEIEQIRDFFLHRKIDERTINKAAIQTIHTDRLIEMSIPIIAEV
                     "
BASE COUNT         3504 a         2489 c         1800 g         3420 t
ORIGIN      
        1 cgctggactt tttgcccagc cttcttacgt cgaagtaata aaagaaaaac taaatgtcta
       61 tattataatt ttacctatat caattcatta gattgcaaat gaatcataaa acgcatagtt
      121 tgtgtatcag aagcataaaa agtgtacgga aagccgtgtt tttctaatat tttctgtaca
      181 ataaacaaac caatccctgt accaccatct ttcttatcac ggctgtagtc tggacgatag
      241 aatggacgaa agacttgatc caattcctcg tcacttaaaa cacgttcaac ctgattttcg
      301 attattaatt gattttggcg cagtactaca cgaataatag cttctttaca tgagtaccga
      361 aaggcattat ctaaaatatt cttaatagct tttaagaaat aatcaggatt tccttcaatg
      421 agaaccggtg atagttctac ttcaaattga tatcccttaa cctctgccaa actctgataa
      481 cttgttaaag aggaatcaat caactgatct aatcggattt gttctctgct ttcctttaaa
      541 gccatatcaa gatttgtagc ttctaaaata gaatgaacta gctcagattg ttcctgcaag
      601 atttccttgc atttttttaa atatgtatca tggtccttaa atggtcccac attataaatc
      661 atgccttcga ctaaccccaa catactagct attggagttt ttaattcgtg tgatgtgata
      721 cggaggaaat cagacttctc cttctcacgt gccatagcac gttcattttc cgttcttaat
      781 tcatcgatac ttgacaataa cttgctatac aggctgttaa tatcctgagc caatgctgtt
      841 atttcatctg ttcctacaac agcacaactg attccggatt ctaacgattg catccgtctt
      901 gttgtttctg aaattcttgc tattctacga gtggacagcc tactgtaaac aaaagctacc
      961 gaaactgcca gaacaataat caacagcaat atgaatggat aaaaagttac caatgtttga
     1021 ctgacatccg ataatgagtg gaatccataa ttaaataaca gataatatgt aactccttct
     1081 gccgatgtta tctcgacgcc cccagaacca atttcatcaa aatctccatt ttctaaatac
     1141 tctttctcat actttttggc catttcatca ttggggtctg gataaataat ttctctatca
     1201 ctcgaaaaaa gactaataat aatcttcgga gtttttctgt cgtaatcatc aatctcagat
     1261 ataatcttag cttctggcat cccatccaat tgtttagcca cagtcatata atcatgtctc
     1321 aattcctgtt tcttaacctg attataatat ataggcatag cataatacaa taaccctaac
     1381 aatgttacag agatgaaaga aatcatcaca gcaacaacta tgaaattttt tctagcaatc
     1441 cccatatcaa gtatcctcta tttgataacc acgaccaaca actgtcttca aaggaagtga
     1501 cggcaatttt ttacgtatat tcttgatatg attatctaag acacgactat ccaattccgt
     1561 atacccccat attcccatca tcaagttatc acgactaaca attttcccac gtcgtttagc
     1621 taaatatagt aaaacttcat attctttttt tgttaattga acttcttctt cttccatata
     1681 aactgcccca ctagttggtt gaataagaat tgttcctatc tcaatgctat ctgtatctcc
     1741 ttttcctctc aaaatattct caatccgttt taccaatata gttggtgaaa atggtttaac
     1801 aacataatca cttataatct gattaaaact aataagctgt gtatattcgt cacccatggc
     1861 tgtcagcatc aaaattggaa tctgagaagt tttgcgaatt tccttcagta cttccaaacc
     1921 tgtcatagac ggaatcatga tatctaaaac aattaaatcg aattgttctt cttgaaacct
     1981 ttctaaagca acctttccat caaaaacaga ttctacctga taaccatatt cttttaaaaa
     2041 ctcacaaaca acttgactaa taactatgtc atcctcgaca accaagatcc ttgacatttt
     2101 tatacctcct cgtaaagttc tattacaaaa tattattata caattatata ccgattcgta
     2161 caatggtgca actctatcat agataaatag agcatcatgt tctgctattt cagctttctt
     2221 ttgacttctt ctgtttaaaa cagataaaaa acagatgaaa ccaaggacat atatagattt
     2281 gtttgataaa ctgaactaaa caaaaatgaa aggagctatc ccattatgtg gagtccaaaa
     2341 aaattaaccg tattaaaatg gtttgatatt ctcattctaa caattatttt atttggagat
     2401 ggaatcatca actctactct ccaatacata gccttacaaa atcaaactac aactcttcaa
     2461 gaaaatttga cattttcaac aatggacaat tataaggctt tggctctaca gttagtttgg
     2521 ctcacaatag ccatcttcta tctattactc cgaaattttg atttctcaat ttggaaaaaa
     2581 catattttta ttactccttg ggttccatta caagctgtcg ccttattcat tttctctgca
     2641 ttatgcttgg atatctatca tttagtatcc tatcagtttc tagcttccaa cactccatcc
     2701 atgtttcaat tatttcctaa cattgattta tcactgattt tgtactcatt gttgaacgga
     2761 ttttatgaag aaattttctt ccttaacctg tgcttactgg ttaaccctaa atatgcaaaa
     2821 tgggcatttt tatattcatt aattattcga tgcagtttcc atacctatca aggtttaatt
     2881 agtgcactcg gtttaggctt aattctagga actattttct atctacttta tcaaaaaata
     2941 aaacctaaaa atttattacc atttttccta gcacatgcgg tggctgatgt tatcggttta
     3001 actattctat catatattct atactagtta tctaacagat aatttgaaca caagctatcc
     3061 tcatatcacc aaagactgag tggataccta ctagtcatga ccacccgtga aaacgggtgg
     3121 tttattttat gtaatttaga gaaaagagtg ccaaaaaacg cataaaatcg tgttgctaag
     3181 aacgttgatt ttatgcattt tattatcaat atttttattg aaatttatat ttatgcccaa
     3241 ctatacttct cagaatcaat gtccatatct catctcagcc tatagattga cagactctaa
     3301 tttataagta acggtctgta catctctgcg gtagtctcga aagagaattt ttgagaaacg
     3361 attttcttcc ttccatttat taaatatagc attgtccata aaccctgcag accgacccca
     3421 ttgcgcatca aattctccct ttccattttc aaacgcccta tactcatccc caccagcacc
     3481 ttctgactta tagtgattta aaatatccgt gttactctga tctactaact tagttagttt
     3541 taagccatct ggaatgataa aatagtatcc accaattgat tcatagaatg cccagtctct
     3601 aaatttgaaa gtcacttccc actcaatttt tttatcggtt acggaagttg cttctatcga
     3661 aacggattgc tgtatttgaa atggtttgtc tggatagttc gtatcttgga tataagccga
     3721 ttgtttctca ttcggcaatt ctggagtaac agggagggat tccatatcca aattattttc
     3781 agctgacctt acagcacgcg gtgtaaattc agaaagggtt gaatcctcaa cctttggctc
     3841 tggggttgct tcagcctttg gctcagaaat gacattctcg atttcctcta ggttagcaga
     3901 ctggtttgga actttatcgg cttgattttc tccattctca gatcctttta tatcttgttc
     3961 ttcaactgtc aatggctatt cttctaacgt ttggttagat tctattgtca caaggcttgc
     4021 atcggttgat gcctccgtat ccgccttgat atttgatctg attgtattac attattctta
     4081 tcatctaccc atttcgaaac cctgtaacct ttttttagaa taacatcatt cggttttcga
     4141 tcattatcaa gcggagcttc tttaatagca atttctttca aaaattctgc taacgttgtc
     4201 cctgcagaaa ttgttctttg gaaattacct tgataaatat aataatagaa atccaaatcc
     4261 gtaatttctg aattttcccc tcctttaact gtaacggtaa tcttatcttt tgattttaaa
     4321 ccttctatag gagcttcagt ttctttgtct acctcaggaa ctgaaggtgc tttcttttct
     4381 gctttctcag tgtttggatt gctaaaatct aagttattcg actttggatt tacctgctct
     4441 aacttcttaa gagtcaattc taaactagca accgaaacga tttgcttaaa tagatgattc
     4501 tgatgatcaa aatatttcat tactacaact agtgaaatat ttttcagtga cttatctaaa
     4561 atctttcctt ttaaccgata agttactttc atcaactttt acaactgttc caaaccacat
     4621 aagcgcaatc ataacagaag ctaatccaac cttactcttt ctcaacgaaa aaatttcagt
     4681 ctgtctattc attttttctc cttgttttct atcatttaat actcaacaca cagtgcctac
     4741 tctaattata gaaaaccaat ctcacatagt attatgtttc gtttgttttt tatctaatct
     4801 gcccatgctc attcctaaga atatgcctca aaacaaagct gggctcaagc ccagtaccac
     4861 ttctctgatt tcgtcttccc actcccaaaa taaaaaatac cagctacacc acatagctga
     4921 tatttcaaat aattattttg cacttctgac acaagcttca taggtctgtt ccatcaacat
     4981 ggtaatagtc atcggaccaa caccacctgg aactggggta atataacttg ccacttctga
     5041 tacctcatcg tatttgacat caccgattag cttgccattt tcatcacgat tcataccaac
     5101 atcaatcacc acggcacctg gcttaacaaa ttccttggtc acaaaatgcc cacgaccaat
     5161 tgcaacgact aaaatatccg cctgacgagc taattctgct agatttttag tacgtgaatg
     5221 agcaatggtc acagttgcat tggcatccaa aaggagctgg gccattggtt ttccaacgat
     5281 attggaacga ccgataacca gagcagtttt tccttctaag tcaatctgat attccttgaa
     5341 catttccata attcctgctg gggtagatgg aatcataaca ggatgaccgg accagaattt
     5401 ccccatgtta gtcggatgaa aaccatccac atccttatct gagtcaatgg ccaacaagac
     5461 cttctcctcg ctgatatggg ctggtaaggg caattgcacc aaaataccat gccattcatc
     5521 atcctgatta tagcgctcaa tcaaatccaa caagtctgac tcagaaatcg tatctggaac
     5581 gcgaacaacc tcactcttga atccagcagc tagagctgac cgctccttat tccgtacata
     5641 aacctgacta gcaggatttt cgccaactaa aataactaca agacctggta ccaaaccctt
     5701 ttcttctttt aatcgagcag ttttctccgc caaggcagcc tgcattttta cacctagtgc
     5761 tttcccatca atgactgtca tacctacact ccttttgttt tttctattat accctaaaat
     5821 tctccgactg actatacttg tccaaagtag aatatagcat atagcaaaaa actccgaaca
     5881 atgtcggagt cgtacttatt tgttcattta ttacaagacc ttagacaaga aatccttggt
     5941 ccgttcttcc ttggtatgtt caaagacttc ttcaggcgtt ccatcctcca cgatgacacc
     6001 gccatccata aagataaccc tgtcagctac ctcacgcgca aatcccatct catgagtcac
     6061 gataaccatg gtcatccctg acttggccaa atcctgcatt acagcaagaa cttctccaac
     6121 catttcagga tctagtgcag aggtcggttc atcaaaaagc aggacatctg ggtccatagc
     6181 cagaccacgt gcaatagcga tccgctgttg ctgaccacct gaaagacttt gtggataggc
     6241 attcgcctta tctggcaatc ctaccttttc aagtaattcc ttagccttct tctcagcctc
     6301 atcctttgca attccctttg tcttaatagg tgataaagta atattatcta ataccgtcat
     6361 attcggaaaa agattgaact gttgaaaaac cattcccatc ttttcacgca tcttgaaaat
     6421 atcatttgac ttgtcagtaa tatcaacacc ttcaaatgta acagttccct tggttggcac
     6481 ttctaagaga ttcattgtac gtaagaaagt cgatttccct gaccctgatg gaccgataat
     6541 aacgaccacc tgaccttgtt gaatatctaa atcaattcct tttagaacct cattctttcc
     6601 gaagtactta tgtaaatcct tgatagaaat aatcgcatta gacatggaac tgccctccct
     6661 tgttcaactt tttctcaaac gactgaataa tcactgttag caccgttgtc ataattagat
     6721 aatagctcgc tgcaaataca agtggtgtta aaggaatata agaagtggat tgaactgtct
     6781 gagcaccgtt ccataattcc atcacaccga tggttgacaa aagtgaacta tccttaacaa
     6841 tagtcacaaa ttcatttccc aaggctggaa ggatattctt gatagcctgt ggcatgataa
     6901 cgtaacgcat cgcctgcttt ggtctaatac caagcgaata agctgcttcc agctgtcctt
     6961 ttggtacagc attaatacca gcacgaacag tttcagatac ataggcaccc gagttcatcg
     7021 aaataacaat gatacctgga atcaagcgcg tcaaatcaac cgtcaaaatt cctagctgaa
     7081 aagttggtgc tacaaaatgt gtcatcgcaa aagcaatcat aatctggaca atcatcggtg
     7141 tcccacggaa aatccagaca tagatattgg cagtccaagc taaaactttg tacttactac
     7201 gctgagcaaa ggcaagcaac acacctaaaa tactaccaaa aaatactgag aaaaatgcaa
     7261 taatgagggt aacaattgcc ccataattaa aataagccca atactcaggc aaaaaagaaa
     7321 aattcattca tcttactcca attctgtcat ttagagtcta ttataccatt tttgaatatt
     7381 tatgcaatac ttttatttat aatattcaat ttacacaaga aaaaagcacc cttaggtgcc
     7441 tctcacttct tcttagtaca atagctcata gatttccatt gcaatcaagt cgatgctgtc
     7501 aaacgcgtac gtttcacgag cagcaacatc acgcaaggta aatactgaac cattttcctc
     7561 gtcatagcta taagccactt ctgcaacaac aataccatca cgttcgaaat tacgtttcaa
     7621 cgtaccgccg tcattagcca tagcctccag acgattgata attctcacca aatgtgattc
     7681 catattcgtt ctcctaatcc tttttatagg aatattttac cacatattgc caaaaaagtc
     7741 ttattttttc cctattttct tcctatcgtc ctatttttca tagaaagttt ttccaagcgt
     7801 agcagtttct tgatttttct atgaatcttg ttataataaa gctagaactg accttttttg
     7861 actatttaac aataggtcac attttttcac agaaagaggt agaattatgc tctgcaaaaa
     7921 ttgtaatatc aacgacgcaa caatccatct ctacaccaac ttaaacggta aacagcagca
     7981 ggtagacctc tgtcacaact gctaccaaat catgaaaaca gaccctaata atgccatcct
     8041 acgtgggttg ggagatttaa caaatcctaa caatatggat ccctttagtg aatttttcaa
     8101 tcacctaggt ggctatcctg gcaatacccc tgctggaaaa aatcgcgaac agactcctcc
     8161 cactcaagcc ggtgggcata atggacgtgg tggacagacc actcctccgc aacaacccca
     8221 acaaccaaat gggctccttg aagaatttgg tatcaacgtt accgaaattg cccgtcgtgg
     8281 ggatattgat ccagtaatcg gtcgcgatca agaaattacc cgtgtcatcg aaattctcaa
     8341 ccgtcgtaca aaaaacaacc ctgttcttat cggtgagcct ggtgtaggta aaacagcggt
     8401 tgttgaaggc ttggctcaaa aaattgtcga tggcgatgtc ccacaaaaat tacgagacaa
     8461 ggaagtcatt cgtctagatg ttgtcagcct cgtacaagga acaggtatcc gtggacaatt
     8521 tgaagaacgc atgcaaaaac tcatggaaga aatccgtaat cgtcgcgaaa tcattctttt
     8581 tattgacgag attcacgaaa ttgtcggtgc tggctctgca ggcgatggta acatggatgc
     8641 aggcaatatc ctcaaaccag ccctcgcacg tggtgaaatg cagctagtcg gtgcaacaac
     8701 gctcaacgag taccgtatta tcgaaaaaga tgccgcccta gaacgccgta tgcaacctgt
     8761 aaaagttgaa gaaccaagtg tcgaagaaac cattactatt ctcaaaggta tccaaaataa
     8821 ataccaggat taccatcatg ttaaatactc cgatgctgct atcgaagcgg ccgcagtact
     8881 gtccaaccgc tacattcaag accgtttcct accagacaaa gctattgacc ttctggatga
     8941 agctggttca aaaatgaatt tgaccctcaa ctttattgat ccaaaggaaa ttgaccaacg
     9001 cctgattgat gccgaaaatc gtaaggcaca agctacacgg gatgaggact atgaaaaagc
     9061 agcctatttc cgtgaccaaa ttgctaagta caaggagatg caaaaggcaa ctatcagcga
     9121 agaagatatt ccactcatta ctgaaaaaga aattgaggcc atcgttgagc aaaaaacaaa
     9181 tatcccagtt ggtgatttaa aagaaaagga acagtcccag cttgtaaacc tcgctagtga
     9241 cttaaaagcc catgttatcg gacaagatga agcagttgac aagatagcta aagccatccg
     9301 ccgtaatcgt gtcggtcttg gtgccccaaa ccgtcccatt ggatccttcc tctttgtcgg
     9361 accaacaggt gtcggtaaaa ccgaattgtc taagcaatta gctatcgaac tcttcggttc
     9421 ggctgacagc atgatccgct tcgatatgtc cgaatacatg gaaaaacacg ctgtcgctaa
     9481 actcgtcgga gctcctccag gttatgtagg ctacgaggaa gccggtcagc taactgaaaa
     9541 agtccgccgc aatccttact ctctcatcct cttggatgag gtagaaaaag cccaccctga
     9601 tgtcatgcac atgttccttc aggtcttaga cgatgggcgt ctgacagatg gacaagggcg
     9661 gactgtcagc ttcaaagata ctatcatcat catgacatca aatgctggta ctggaaaagt
     9721 tgaagcaagt gtcggttttg gtgcggctat ggaagggcgg actcaatcag tccttggcca
     9781 acttagcaat ttcttcacac ctgaatttat gaaccgattt gacggtatta ttgagttcca
     9841 accactgagc aaggaaaacc tacttgaaat cgtcagcctc atgctagacg atgtaaacaa
     9901 acgcctttct cacaatggca tcagcctcca tgtaacagat aaagttaagg agaaattagt
     9961 ggaccttggc tacgatccaa agatgggagc tcgtccacta cgcagaacca tccaagatca
    10021 gattgaagat gctatcaccg acttctactt agaacatcca gcagaaaaag acctacgtgc
    10081 tgtcatgtca agtaaaggta caattcaaat caaggcacaa acaaagacaa aataagaaaa
    10141 tagagctgct ccctacgagt agcctatttt actgttttga tactctattt gtctaaattc
    10201 ttccccatct ccatcctata aaaaaacttt actttgtaaa gcctatcaca aggaaaaata
    10261 ataaaaaagt ggtataatgt atacaactca ttccaataat gaaagaggat agaattgcct
    10321 atggagaaaa ttgctgtatt tggagaaaag aaagctggcg tcagctacca gagtcgcttt
    10381 ggtgtttacg cagttatccc agatgaaaag aaagaacaga ttatactcgt tcaagcacca
    10441 aacggagctt ggtttcttcc tggtggagaa attgaaaagg gagaaaatca cctcattgct
    10501 ttggagcgcg aattgatgga agagcttgga ttcaccgctg aaatcggaaa atactttggt
    10561 caggctgacg aatacttcta ctctagccac cgtgataccc atttctataa tccagcctac
    10621 atctatgaag taactagcta ccatcaaata ggacaaccac tagaagattt caaccatatt
    10681 gcttggttcc cagtcaatga agccatcgat aaactcaaac gtggtagtca caaatggggc
    10741 attgaacaat ggaaattgca agaaaattca ttcaataact agtaaaaaca ctctaatcgt
    10801 gctataatgt agccaaagag atagaggagg ttccacatga aaatcattaa cacgacaaat
    10861 agtcatccca atcttgtcca aagccagttg gctaatactg atgctttcct agtagagact
    10921 tattctgcag gtaatacaga cgttattttc acacaggcac cccgtcatta tgaactcttg
    10981 attagtaata aataccgtgc agtacaacaa aatgaaatcg agcaaattcg tgatttcttc
    11041 cttcatcgaa aaattgatga acgaactatt aacaaggctg ccattcaaac aattcacaca
    11101 gaccgtttga ttgaaatgtc tattcccatt atcgcagaag tgtaagaagc cagatggctt
    11161 ctttttttct atttatagtc atttgaatta tctttgatac atcgtcactt tcg
//
LOCUS       DASFQS010000075        10710 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.077, whole genome shotgun sequence.
ACCESSION   DASFQS010000075 DASFQS010000000
VERSION     DASFQS010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10710
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.077"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(9..809)
                     /locus_tag="U1041_001658"
     CDS             complement(9..809)
                     /locus_tag="U1041_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4768761.1"
                     /translation="MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSP
                     DYAPFEFQALVDGKNEVVGADIMLAQKIADELGVKLEVSAMSFDNVLSSVQNGKADIA
                     IAGLSYSEDRAKVFDFSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQES
                     YAQENISQANIISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPT
                     IDENSKVIALPKGSAELKTTIDKVIAEVKASGEFDTFLEKAATYTSVE"
     gene            complement(981..1793)
                     /locus_tag="U1041_001659"
     CDS             complement(981..1793)
                     /locus_tag="U1041_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4768762.1"
                     /translation="MMKKYIMTGLVLLATVGLSACSGNATREDTSLKDVQEKGKLIVA
                     LNPEFPPFEFRTLVDGKDTIVGADIELAKAIGQELGVEVEFSAMSFDNVLNNVQSGQS
                     DIAISGISATEERAKVYDFSIPYYTSTNKVIINKENLVQYTSLDSLAEANIGAQKGSI
                     QEQIVKEQLPSSTVIALASNGELINQLKSQKLEAVIFEEPIAKAYVAKNDDLVILDTE
                     IKSSYSDAYAIALPKGSTALKEKVDSVITKLVESGQMDQFVQEAYELSIANN"
     gene            complement(1990..2457)
                     /locus_tag="U1041_001660"
     CDS             complement(1990..2457)
                     /locus_tag="U1041_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HEM4768763.1"
                     /translation="MARKEMVTLTNMCLIEDKEGKVVVQIRDPKRYRWSGVAFPGGHI
                     EEGENFHDSVVREVQEETGLTVTDARLVGLKHWPDKEGHRYIVFLYKATEFTGTIRST
                     EEGEVRWVEKSDLPQMDLAYDLLEILKVMDEPDLSEFFYTRKNDDGEWDINFR"
     gene            complement(2450..2593)
                     /locus_tag="U1041_001661"
                     /pseudo
     CDS             complement(2450..2593)
                     /locus_tag="U1041_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730376.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            complement(2588..2918)
                     /locus_tag="U1041_001662"
                     /pseudo
     CDS             complement(2588..2918)
                     /locus_tag="U1041_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775141.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3034..4497)
                     /locus_tag="U1041_001663"
     CDS             complement(3034..4497)
                     /locus_tag="U1041_001663"
                     /inference="COORDINATES: protein motif:HMM:NF037255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768764.1"
                     /translation="MKYSEEFKEFYRDNFPRSDMDPLNTIIALDTNSLLNIFRFTPEA
                     SSLFFKAIEQSKEHLYIPYLVALEFHFNKKQILEGNNKNVQSAKNVIEKRWKKLGDDF
                     SKDIFKEFSFRNGKDAPKEMEKKIAKLIWETINADDEKIKKEAINLIDEVKKNQEKLY
                     HDLISIIEERTGDRYSQDFIDAVQKEGKERYTNHIPPGYDDRNKQGYRKYNNVKYELK
                     YGDLIVWKDLIKRSKENKDIKHVILVTSDGKSKNKNDLLYKIDEQTIGPRIELLHEMR
                     EEGEAEFYIIDELEFVEHFSQEEVSPQIVQDITNALLDMTEVVSHPKTNDGIKSMASS
                     LAKVTSSLGNSFSSANKKREVSDVFDLENLVMEDFNIKKVLEDYLINTLPDMYFEAEY
                     GDIGWGEFEFLSIFGSNIEDYNIGDSFFEIACTANVATHVEFSITTHNPDYEPSEPEF
                     FYESRSLEAEFVISFYYDLDKGTFEDIEIIEFISHEN"
     gene            complement(4519..6504)
                     /gene="uvrB"
                     /locus_tag="U1041_001664"
     CDS             complement(4519..6504)
                     /gene="uvrB"
                     /locus_tag="U1041_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEM4768765.1"
                     /translation="MINRNTENQFKLVSKYAPSGDQPQAIETLVDNIEGGEKAQILMG
                     ATGTGKTYTMSQVIARVNKPTLVIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQ
                     PEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYS
                     DSVVSLRPGQEISRDQLLNSLVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFR
                     VEFFGDEIDRIREIESLTGKVLGDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQL
                     KVFEAEGKLLEAQRLKQRTDYDIEMLREMGYTNGVENYSRHMDGRSEGEPPYTLLDFF
                     PEDYLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVH
                     QIVYVSATPGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINARVEKD
                     ERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGIN
                     LLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADKVTESMR
                     KAMDETARRRQIQMAYNEEHGIIPQTIKKEIRDLISVTKAVTRDKEEVVDFNALNKDE
                     RKAMIKKLEAQMQEAAEVLDFELAAQIRDMVIELKNM"
     gene            6702..8900
                     /locus_tag="U1041_001665"
     CDS             6702..8900
                     /locus_tag="U1041_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HEM4768766.1"
                     /translation="MKKKLLMLLASILPVFFIFTGVKADDTIDIVFDNAYAPFEFKDS
                     DQIYKGLDVDIINEVAKRSGWTMNQSFPGFDAAVNAVQAGSADALMAGTTITEARKKV
                     FTFSDPYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGYNVKT
                     FDTGDLMYNSLSAGAVDAVMDDEAVIQYAIQQGQDLSIDIEGEAIGSFGFSVKKGSQY
                     EYLVEDFNKALAEMKKDGTYETIMNKWLGASTTSAESTDYSSRLSLTGNASAKATPVK
                     SSYTIVADSSFAPFEYQDESGNYVGIDMELIKAIAENQGFTITIQNPGFDAALNAVQA
                     GQADAVIAGMSITDARKEIFDFSNAYYTSNILLAVKNGSDIASYEDLKGKTVGAKNGT
                     ASYSFLEENKAKYGYTLKAFDEASSMYDSLNSGSIDALMDDEAVLLYAIQQGRNFATP
                     IPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGKYDEILNKYFNSTEEASTTTST
                     VDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSS
                     VFVDVVRGIPLMIVAAFIFWGIPNLIESITGQQSPINDFVAGTIALSLNSGAYIAEIV
                     RGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISA
                     IGLVELFQAGKIIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEKGGK"
     gene            8900..9640
                     /locus_tag="U1041_001666"
     CDS             8900..9640
                     /locus_tag="U1041_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004254183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4768767.1"
                     /translation="MAQLKINVHDLHKSYGKNEVLKGITAKFYEGDVVCIIGPSGSGK
                     STFLRTMNLLETITSGQVTVDGYDLTDPKTDVDAFRSNVGMVFQHFNLFPHMSVLDNI
                     TFAPIEHKLMDRAEAEKVGMELLEKVGLADKRDAMPDSLSGGQKQRVAIARALAMNPD
                     IMLFDEPTSALDPEMVGDVLNVMKDLAEQGMTMLIVTHEMGFARKVANRVIFTDGGEF
                     LEDGTPEQIFDNPQHPRLQDFLDKVLNV"
     gene            complement(9669..10158)
                     /locus_tag="U1041_001667"
                     /pseudo
     CDS             complement(9669..10158)
                     /locus_tag="U1041_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018379763.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
     gene            complement(10155..10646)
                     /locus_tag="U1041_001668"
     CDS             complement(10155..10646)
                     /locus_tag="U1041_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768768.1"
                     /translation="MAITGIEQADILEIDKQVRLRRYDGQHDFAFEWHQDLELVWLID
                     GDQERYSQDLLDRMYDYLSKNGECYFIEIFEDGQFLPIGDVTLFKDDFAIAIGDKRYW
                     NKGIGTKVLQRMIERAREVGLEEILVEEIYDWNTGSRKLFEKCGFEAVEKTKKGWSYR
                     LTV"
BASE COUNT         3067 a         2359 c         1879 g         3405 t
ORIGIN      
        1 cgtttctctt attcaacact tgtatatgtt gcagctttct caaggaaagt atcaaactca
       61 ccacttgctt ttacttctgc gataaccttg tctatcgtag tttttagttc tgcactacct
      121 tttggcaaag caatgacttt cgaattctca tcaatcgttg gaaattcaac ggatgcaacg
      181 gctaaatctg aattctgtga aacataacca gcagcaactg gagaatccat taaaatagca
      241 tcaacttttc ctgatttgag ctcatttaca gcttcaccca tcaaggttaa agaaattatg
      301 ttagcttgac taatgttttc ctgtgcgtag gattcttgtg ttgaaccctt ttgtaccgcg
      361 agagttttcc cactcatagc atcaattgaa gtgagtgaat tagcgctatc ttttttgata
      421 agtaatacat cagaaatttg atagtaactt tcagagaaat caaaaacttt tgcacgatct
      481 tccgaataag atagaccagc aattgcaata tcagctttgc cattttgaac gctagacaat
      541 acattgtcaa aactcattgc tgaaacttca agcttgaccc caagttcgtc ggctattttt
      601 tgagccaaca taatatctgc accaacaact tcattctttc catcaactag tgcctgaaac
      661 tcgaatggag catagtctgg actagttgcc actaccaatg ttcctttttc tttaatttta
      721 tctaatgcgg attgtgatga cgtcgaagaa caagctgcca atgtcagtcc tgctaaaact
      781 gttgctgcta atgccaagat ttttttcata tttcctaaat accttctctt tattttaata
      841 aaatacttat tctagaaaac acaagcttat tgattttcat tgtattttct tgcagttttt
      901 cagaatgtat tctcatttta attcattttt atacatttgt caagaaaata ttatttttat
      961 tcaatttaat cgtataaaat ttaattgtta gcaatggata attcataggc ttcttgaaca
     1021 aattgatcca tctgtccaga ttccactagt tttgtaatga cagagtcaac tttttccttt
     1081 aaagctgtac ttccttttgg caaggcaata gcataggcat ctgaatagct actttttatc
     1141 tcagtatcta aaataactaa gtcatcattt ttggcaacat aggctttcgc aatcggctct
     1201 tcaaaaataa ctgcttctag cttctgtgat tttaattgat taatcagctc gccgttcgaa
     1261 gctagagcaa taaccgtgga agacggaagc tgttctttaa caatttgttc ttgaatagaa
     1321 cctttttgtg ctcctatatt tgcctcagct agagaatcaa gcgatgtata ttgtacaaga
     1381 ttctctttat ttataataac tttattggtt gaggtgtagt aaggaatgga aaaatcatac
     1441 acttttgcac gctcttcagt ggctgaaatt cctgaaatgg caatatccga ttgccctgac
     1501 tggacattgt tcaaaacatt atcaaaactc atcgctgaaa attcgacttc tacacccaat
     1561 tcttgaccaa tggcttttgc aagctcaatg tcagctccaa cgattgtatc tttgccatca
     1621 accagtgttc taaactcaaa tggtggaaat tctggattca atgcaacaat tagttttccc
     1681 ttttcctgaa catccttcaa agaagtatct tctcgagtag catttccact acaagcactt
     1741 agacctactg ttgccaacaa aaccaatccc gtcataatat attttttcat catcatattc
     1801 tcctttaaaa taatcctgtg catacttata ccgtttttta tataaaacat cggactttca
     1861 ttatagtaaa atgcatattt tttctccttt tttgaaagat aaaaacattt tacgtcattt
     1921 ttatacattt gtcaactagt ttgttgtatt tttattcaaa cagcataaaa aagaagctat
     1981 ttctagcttc tacctaaaat ttatatccca ctctccatcg tcattttttc tagtataaaa
     2041 gaactcggac aaatctggct catccatgac tttcagtatt tctagcaaat cataggccaa
     2101 atccatctga ggcaggtccg acttctcgac ccaacgcacc tcgccttctt cagttgatcg
     2161 gatagttcct gtaaactctg ttgccttata gagaaataca atgtaacgat gcccttcctt
     2221 atccggccaa tgtttaagac caaccaagcg agcatcagtg actgttaaac ccgtttcttc
     2281 ttgcacttct ctaacaaccg aatcatggaa attctcgcct tcttcaatat gtccacctgg
     2341 aaaagcaaca ccagaccaac gataacgctt gggatctcga atctgtacaa cgaccttccc
     2401 ttccttatct tcgattagac acatgttggt caaagtgacc atttcttttc tagccatttt
     2461 ttctctcttt ctgtttaaaa atcattctat attctgtacg ttctgcgcct aaattgaccg
     2521 tttttttgac accatcaaat cggaagccca ctttttcata gaaggcaacg gcacgcgcat
     2581 tcccttccaa tagtccggtt tctacagagc cagtatttgg caaaacttga gacgtgcttg
     2641 tcgatggagt agatgctgtg ccagtagctg gtcgatagat caggtaataa tttgcatccg
     2701 tttcctgagc taagccaggc aagtcacgaa taatcaactc cttttctgca tctgtcaatt
     2761 cttgctctgt cacataagaa taattgatag actgagcact agctgacggt gctgctgcga
     2821 ccgacgatgc aaaaaacaaa cttgctacag ctgccgagat aagtccaatt gacagtttaa
     2881 ccgaaccgct gtcgtttttc accaaaaata tttttcataa aaacttccct aaatagtata
     2941 gaaaccgtta tacctactaa gagaggtttc tacaattttt ttgtcttgta tttgcgatac
     3001 atagggtgta cttatatttt tgattcttta ttattaattt tcatgggaaa taaactcaat
     3061 tatttctatg tcttcaaaag tacctttatc taaatcataa taaaatgaaa ttacaaattc
     3121 tgcttccaaa ctccttgact cataaaagaa ttctggttca ctcggctcat agtctgggtt
     3181 atgagtagtt atactaaatt caacatgagt agctacatta gcagtacaag cgatttcaaa
     3241 aaaactgtct cctatattgt aatcttcaat atttgaaccg aagattgata gaaattcaaa
     3301 ttctccccat ccaatatcac catattctgc ttcgaaatac atatcaggca aagtatttat
     3361 aagatagtct tctaagacct tctttatgtt aaaatcctcc attacaagat tttctaaatc
     3421 aaaaacatct gaaacctctc gctttttatt tgcagatgaa aaactattcc ctaaactaga
     3481 agtaactttc gcaagtgagc tagccataga tttaataccg tcattagttt taggatgaga
     3541 taccacttca gtcatatcta ataatgcatt agtaatatct tgaacaatct gaggcgatac
     3601 ttcctcttgt gaaaaatgtt ctacaaattc taactcatct attatataaa actctgcttc
     3661 tccttcttcc ctcatctcat gaagaagttc gattcttggc ccgatagttt gctcgtctat
     3721 tttataaagt agatcattct tattctttga ttttccatct gaagtcacca aaataacatg
     3781 tttaatgtcc ttattctctt tggaacgttt aatcaaatcc ttccagacga ttaaatctcc
     3841 gtacttgagc tcatacttca cattattata tttccgataa ccttgtttat tacgatcatc
     3901 atatccagga gggatatgat ttgtataccg ttcctttcct tctttttgga cagcatcaat
     3961 aaaatcttgt gaatatctat cgcctgttct ttcttcaata atactaatca agtcatgata
     4021 caatttttcc tggtttttct taacttcatc aattaagttt attgcctctt tttttatctt
     4081 ttcatcgtca gcatttatcg tttcccaaat taatttggca atcttttttt ccatttcttt
     4141 tggggcatct ttcccatttc taaaagaaaa ctctttgaaa atatctttag aaaagtcatc
     4201 acctaatttt ttccatcttt tttcgatgac attttttgct gactgaacat ttttattatt
     4261 tccctctaga atttgctttt tgttaaaatg aaactcaagt gcgactaaat atgggatata
     4321 aagatgttcc ttactttgct ctatagcttt gaaaaatagg cttgatgcct ctggtgtaaa
     4381 tcgaaaaata ttcaaaagcg aatttgtgtc aagtgcaata attgtattta acggatccat
     4441 gtcactgcgg ggaaaattat ctctgtaaaa ttccttgaat tcttctgagt atttcacatt
     4501 aatttccttt ctaattccct acatattctt caactcaatg accatgtcac gaatctgggc
     4561 tgccagttca aagtcaagca cttctgcagc ttcttgcatt tgagcttcca gtttcttgat
     4621 catagccttg cgttcatctt tgttgagggc gttgaagtcc actacttctt ccttgtcccg
     4681 agtgacagcc ttggtcacgc taatcaggtc acggatttcc tttttaatag tctgtggaat
     4741 gataccatgt tcttcattat aagccatctg gatttgacgg cggcgggctg tttcgtccat
     4801 agccttgcgc atggactcgg tgaccttgtc cgcatacatg atgacatgac cttcagagtt
     4861 acgggccgca cgaccaattg tctggatgag ccctcgttca ttacggagga aaccttcctt
     4921 gtcagcatct agaatagcaa ccagactgac ttctggcacg tcaatccctt cacgcaagag
     4981 gttaatccct atcaagacat caaagacacc cagacgcaaa tcgcggataa tctccgtacg
     5041 ctccaaggtc ttgatgtccg agtgcatata cttgaccttg acgcccattt ctttcaagta
     5101 gtcggtcaag tcctctgcca ttttcttggt cagggtagtg ataaaggttc gctcgtcttt
     5161 ttcaacacgg gcattgattt cacccaggag gtcgtccatt tggcccatag ttggacggac
     5221 ttccacctca ggatccagaa gccctgttgg ccggataatc tgctcgacaa cggtatcggt
     5281 ctgctccatt tcatagtcac ccggcgttgc agatacatag acaatctggt ggacatggct
     5341 ctcaaattct tccctgcgca gcggacggtt atccaatgcg ctcgggaggc ggaaaccata
     5401 gttgaccaac atctccttgc gtgagcggtc accattgtac atacccttaa tctgccccat
     5461 ggtcatgtgg ctctcgtcaa tcataatcag gtagtcttca gggaaaaagt ccagcagtgt
     5521 gtacggaggc tcgccctcgc ttcgcccgtc catgtgtcgt gaatagttct caactccgtt
     5581 ggtgtagccc atttcccgaa gcatctcgat gtcgtagtcg gttcgttgtt tcaatcgctg
     5641 agcttctaag agttttcctt ctgcctcaaa gaccttgagc tgctcttcca gctccgcctg
     5701 aatcttggca atagccgttt ccatgtggtc atcgttggtc acgaagtggg tggcagggaa
     5761 aatggccaag tgatccacat cgcccaaaac cttacctgtc aggctttcaa tctcacgaat
     5821 gcggtcgatt tcatcaccga aaaactccac acggaaggcg tgttcatctc gagaagccgg
     5881 gaaaatctcc accacgtctc cacgcacacg gaaacgcccc cgttggaagt caatgtcgtt
     5941 gcgctcaaac tggatatcta ccagagaatt gagcaactga tcacgggaaa tctcctgacc
     6001 tggtcgcaga ctgaccacac tatctgaata ttccttgggc gatcccaaac cgtagataca
     6061 ggaaacggag gcaacgacga tgacatcgtt gcgttctaga agagctgagg tcgctgagtg
     6121 gcggagcttg tcaatctcat cattgaccga actatccttt tcgatatagg tgtcgctaga
     6181 cggtacataa gcttctggct ggtagtaatc gtagtaagac acgaagtatt cgactgcatt
     6241 ttctgggaag aattccttga actcactata aagctgacca gctagggtct tgttgtgggc
     6301 gatgactagg gtcggcttat tgacacgggc aatgacctgg ctcatggtgt aggtcttacc
     6361 agttcctgtt gcccccatga gaatctgggc tttttcgccc ccctcgatgt tatcgaccaa
     6421 ggtttcaatg gcttggggct ggtcgccaga tggtgcatat tttgatacaa gtttaaattg
     6481 gttttcagta tttcgattaa tcatacttct attttatcat aagttcgact aatggagaaa
     6541 cattctaaac cattcacaac catgtccaaa atattaaatt ttctcacatt ttaatgactt
     6601 tgtatgttag aacttctaac attataaaag cctcgatttt gcattaattt tcagaatatg
     6661 atatactagg acagttattt tataatagaa ggagtatgga aatgaagaaa aaattactca
     6721 tgttattggc aagcattctg ccagtattct ttatttttac tggcgttaaa gctgacgata
     6781 ctattgatat cgtatttgac aatgcttacg ccccattcga gtttaaagac tcagatcaaa
     6841 tttataaagg attagacgtt gacatcatca acgaagtagc caagcgctca ggttggacca
     6901 tgaatcaaag cttcccagga tttgatgcag ctgtaaacgc tgtacaggct ggatctgcgg
     6961 atgccctaat ggcaggtaca actatcaccg aagcgcgtaa gaaagtattt actttctcag
     7021 acccttattt cgacaccaaa atcgttatcg ctaccacaaa ggcaaatacc atctcttcat
     7081 ataaggacct taaaggcaag actgtcggtg tcaaaaacgg taccgcagcc caaaacttcc
     7141 tagaagaaaa caaagacaag tacggatata acgtaaaaac ttttgatact ggcgatttga
     7201 tgtataatag cctttctgct ggtgctgttg atgcagtcat ggacgacgaa gcggttattc
     7261 aatacgctat ccaacaaggt caagacctaa gcattgacat cgaaggcgaa gctatcggtt
     7321 cattcggatt ctctgtaaaa aaaggtagcc aatatgaata tcttgttgaa gactttaaca
     7381 aggctttagc tgagatgaag aaagatggca cctacgaaac aatcatgaac aaatggttag
     7441 gagcttctac cacttctgcc gaaagcacag attactcatc tcgtttaagc ttaacaggaa
     7501 acgcatcagc taaagcaaca cctgtcaaat caagctacac aattgtggca gattcttctt
     7561 ttgctccatt tgaataccaa gatgaatcag gtaactatgt cgggattgac atggaattaa
     7621 tcaaggcaat cgctgaaaac caaggattta ccattaccat tcaaaaccct ggtttcgacg
     7681 ctgcactaaa tgctgttcaa gctggacaag ctgatgcagt tattgccggt atgtctatca
     7741 cagatgctcg taaggaaatc tttgacttct caaacgccta ctatacttca aacatcctat
     7801 tagctgttaa aaatggtagt gacatcgctt cttacgaaga cttaaaaggg aaaactgttg
     7861 gagctaaaaa tggtactgct tcatatagtt tcttagaaga aaacaaggca aaatatggtt
     7921 ataccctaaa agccttcgac gaagcttcaa gtatgtatga cagtttaaac tctggttcta
     7981 ttgatgctct tatggatgac gaagctgttc ttttatatgc aatccaacaa ggtcgcaact
     8041 ttgcaacacc aattcctggc gaaaaatcag gtgagtacgg atttgccgtt aaaaaaggtg
     8101 ccaacccaga attaattgaa atgtttaaca acggcttagc tgccctagtt gaatcaggca
     8161 agtatgatga aatccttaat aagtatttca actcaactga agaagcaagc acaacgactt
     8221 caactgttga tgagacaaca attgttggtc ttttgaaaaa caactacggt caattgctct
     8281 caggtcttgg tatcacaatc ggacttgccc ttctatcatt tgctattgca attgtcatcg
     8341 gtattatctt cggtatgttt gctgtcagcc cagttaaagc actccgtgtt acttcatctg
     8401 tttttgtaga tgttgttcgt ggtattccgc tcatgattgt cgctgcattc atcttctggg
     8461 gtattccaaa cttaatcgag tcgattactg gtcaacaatc tcctatcaat gactttgtcg
     8521 ctggtacgat cgccctatcc ctcaactctg gtgcctatat tgctgagatt gttcgtggtg
     8581 gtattcaggc agttccagct ggtcagatgg aagcatctcg cagtttgggt atttcctacg
     8641 gaacaaccat gcgcaagatt atcctacctc aagctggtaa aattatgttg cctaacttta
     8701 tcaaccagtt tgttattact ctgaaagata ctactatcat ttctgcgatt ggtttagtag
     8761 aactcttcca agcaggtaaa atcattattg cacgtaacta ccaatccttc cgtatgtatg
     8821 caattcttgc catcatttac ttggtagtta tcacactctt gactcgctta gcacgcaaac
     8881 tcgaaaaagg aggcaaataa tggctcaatt aaaaatcaac gtccatgact tacacaagtc
     8941 ttatggtaaa aacgaggtcc tcaaaggtat tactgctaag ttctatgaag gcgatgttgt
     9001 ttgtatcatc ggtccttctg gttcaggtaa atcgaccttc cttcgtacaa tgaacttact
     9061 tgaaaccatt acaagtggtc aagtaacagt cgatggatat gacttaaccg atcctaagac
     9121 agatgttgat gccttccgtt caaatgtcgg aatggtattc cagcacttta accttttccc
     9181 acacatgtca gtcctagaca atatcacatt tgcgccaatc gaacataagt tgatggatag
     9241 ggcagaagct gaaaaagtcg gtatggaatt gttggaaaaa gttggattag cagacaaacg
     9301 cgacgctatg ccagacagcc tttcaggtgg tcagaagcaa cgtgttgcca tcgctcgtgc
     9361 cctcgctatg aacccagata tcatgctctt cgacgaacca acttctgccc ttgaccctga
     9421 aatggttggc gatgtactca acgttatgaa agacttggct gagcaaggta tgaccatgtt
     9481 aatcgtcaca cacgagatgg gctttgcccg caaggttgct aaccgtgtta tcttcactga
     9541 tggcggtgag ttccttgaag atggtacacc tgagcaaatc tttgacaacc cacaacatcc
     9601 acgtttacaa gacttcctag ataaggtatt gaacgtgtag atatgcaaaa agcctttgac
     9661 ccaaagagtc aaggcttttt gagttgcttc aaataatcat ttgcctcttt tctggaggta
     9721 aatataaaaa tattcttgtc cttatatatg gatagcagat tgaaaatatt ggggcggacc
     9781 tgcgttcgaa aattctttac aaactctaat aattcttcat cgacagtcat cgaaacccac
     9841 ggtatatcca ctctcggtct gccaacacga ctgtatagac cttccacgca cattgtttct
     9901 gggtaatcta aaaatagtat cgtatcacaa gccgccattc gaagtttata agtcccccta
     9961 taagaccatc gacaatccac tcttcttgct ttaatacttt tgacgagctt gaaaaacttc
    10021 tttagcaact attgtcttgt ccggtaacca gtttaactga tccaaatgat agaggggaaa
    10081 tcctgtaatt tctttcaatt tcagtgaaaa tgtcgatttt ccagcaccag ggcaaccaat
    10141 aatcattact ttcttcatac tgttaaccta taggaccaac ctttctttgt cttttcaaca
    10201 gcttcaaagc cacatttctc aaatagttta cgtgagcccg tattccagtc atatatttct
    10261 tcgacaagta tttcctcaag ccccacttct cttgcacgtt caatcattcg ctgtaatacc
    10321 ttggttccaa ttcctttatt ccaataccgc ttgtctccaa tagcaatggc aaaatcatct
    10381 ttaaaaagag tcacatcacc tattggtaga aactgcccgt cttcaaaaat ttcaataaag
    10441 taacattcgc catttttaga taaatagtca tacatacgat cgagcaagtc ctgactataa
    10501 cgttcttgat caccatcaat cagccagacc aattccaaat cttggtgcca ttcaaaagca
    10561 aaatcatgtt gtccatcata ccgacgaaga cggacttgtt tgtctatttc taaaatatct
    10621 gcttgttcaa ttccagtgat tgccatttcg gatcctctct catttacaat aagttcattt
    10681 taacatacat ctctatcaat atcaataaat
//
LOCUS       DASFQS010000076        10271 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.078, whole genome shotgun sequence.
ACCESSION   DASFQS010000076 DASFQS010000000
VERSION     DASFQS010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10271
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.078"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(320..2743)
                     /locus_tag="U1041_001669"
     CDS             complement(320..2743)
                     /locus_tag="U1041_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM4768769.1"
                     /translation="MATKSDKQDFKKKISALGLGDVVGVFLRMLKLLFNSVAVLVFLF
                     GLFGAGIGIGFVVSLFDDVKIPKTEELVAKVSEVSRISTVTYSDGSLVSEVNSDLLRV
                     PITSEEVSNYLKQAVIATEDETFETHNGVVPKAVLRAALGSVGLGSSSGGSTLTQQLI
                     KQQLVGDAPTFTRKANEIVSALALERNMTKEEILTIYLNVSPFGRNNQGRNIAGVEAA
                     AQGIFGKPAKDLTVPQAAFIAGLPQSPIVYSPYASDGTRKSDEDMIYGIERYQDVLFN
                     MYRASFLTKEEYETYKAYDIKQDFIAPAPVMADTKDYLYYEVMEEAQEVMFDYLVKRD
                     KVSENDLKNDETKASYEELAKQELSQGGYTIKSTVDQGIYAAMQSVVANYGSVLDDGN
                     EYVETGSVLIDNATGAILGFVGGRDYATNQNNHAFDTLRSPASTIKPLLAYGIAIDQG
                     LIGSASILSDYPTNFSSGQPIMYGSGRGTGMMNLQTAIDRSVNIPAFWTYKMMRNAGV
                     DAKAYMDKMNYHIPMYDIESVPLGGGVEISVLTNTNAYQTLANGGVYNKHYIVESITA
                     SDGTVVYQHEAAPVQVYSKATASIMNQLLRQVVNSGYTTTFKSRLSGLNPQAASSDFV
                     GKTGTSNEVNDVWLMLSTPRVTLGTWAGNDDNSEMYVWTGYHNNSQYVAYMVDALYNV
                     NADMFAGKFELDSSVIASSVVASTGQRAGTTQVNGRQVTVGGAMTTSYWAKNGAPVTS
                     YNFMVGGTDSDRAQAWNTIIGSQTPTSSSSTQRSSSTRSRTSSSANNTNQSSETQTAT
                     SEQANNDSP"
     gene            2897..4153
                     /locus_tag="U1041_001670"
     CDS             2897..4153
                     /locus_tag="U1041_001670"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011184085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEM4768770.1"
                     /translation="MNIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSL
                     HLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQ
                     GQLSRFLDFENGDNKAEMVNNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRIET
                     GISYTEFAYQIMQGYDFYELNDKHNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMT
                     VPLITDSTGKKFGKSEGNAVWLDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDE
                     IAEIEEKFDAARHERLAQKILAKEVVTLVHGEEAYKQALNITEQLFAGNIKNLSAKEL
                     KQGLSNVPNYAVQAEDNLNIVELLVTSGIVNSKRQAREDVANGAIYVNGERVQDLDYT
                     LSDSDKIDGELTVIRRGKKKYSVLTY"
     gene            4157..4939
                     /locus_tag="U1041_001671"
     CDS             4157..4939
                     /locus_tag="U1041_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1211 domain-containing protein"
                     /protein_id="HEM4768771.1"
                     /translation="MKNTKQNPKNQEFLNDYFEQMAQEASLLHPELEHLSADERQAFL
                     DQLYREDETRRAKRLKEHLEVFSDAVIGVIITMMLLEIPLPSDTVDTHHFFTGILIFF
                     VSFFIVADFWYDNHKILGQIEHATSKILIVQFNFMATLALIPLFTRWMMEGITTTAVV
                     GYGAVTIAVNLCQSILNYFVLQEKFAGTTYTKRFVSMAHLRQLVTVALFNIVVILFAY
                     FNPTLAFYFYILRPIVSFLGAAFFEKRRQERKEKMAVRVNHI"
     gene            4993..5368
                     /locus_tag="U1041_001672"
                     /pseudo
     CDS             4993..5368
                     /locus_tag="U1041_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646263.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
     gene            complement(5396..5605)
                     /locus_tag="U1041_001673"
     CDS             complement(5396..5605)
                     /locus_tag="U1041_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEM4768772.1"
                     /translation="MKQTLKLKNLSCQNCVKHVTNHLLDLDGVEEVKIQLEEQLAEVG
                     TSVAYDLEQYQEVLDDTIYEVEELV"
     gene            complement(5602..6048)
                     /locus_tag="U1041_001674"
     CDS             complement(5602..6048)
                     /locus_tag="U1041_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopY/TcrY family copper transport repressor"
                     /protein_id="HEM4768773.1"
                     /translation="MEQTISAAEWQVMRVLWAHPGATSQEIIQALQEGFDWQATTIKT
                     LLGRLRKKNYLRMAKETSKYHYYPLISEEEHLQGQVELLLATICSTKQGQLVENLLDT
                     GTFSQKSLENLASKISHLQRTAPEQIACQCLAGQCTCGHHAKGEQI"
     gene            complement(6151..7662)
                     /locus_tag="U1041_001675"
     CDS             complement(6151..7662)
                     /locus_tag="U1041_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     AdcA"
                     /protein_id="HEM4768774.1"
                     /translation="MKKVGLLFLSASALLLAACGNSTASQEDGKLNIVTTFYPVYEFT
                     KQVTGDEANVELLVKAGTEVHGYEPSAKDIARIQEADAFVYENENMETWVHDVEGSID
                     TEKVNIISATDGMLLLPGSEEGEEHDHSEEGHSHAYDPHVWLSPERAITLVENIRDSL
                     VAKYPEKKDAFETNAAAYIEKLDALDAKYSETLSAAKQKYFVTQHTAFAYLALDYGLK
                     QVSITGVAADEDPTPTRLAELTEYIKQYGIKYIYFEENASKSVAETLAKETGVQLDVL
                     NPLESLTDEDMKDGKDYISVMEDNLAALEKTTSQAGVEILPEDGAETAQTVYNGYFED
                     SAVKDRTLSDYAGEWQSVYPYLLDGTLDQVWDYKAKIKGDMTAEEYKAYYDTGYKTDV
                     DHINITENTMEFVVGDKKEKFTYKYVGYKILTYKKGNRGVRFLFEATDANAGNYKYVQ
                     FSDHNIASVKTGHFHIYFGGESQEKLLEELENWPTYYPVGLTGLEIGQEMLAH"
     gene            complement(7672..8484)
                     /locus_tag="U1041_001676"
     CDS             complement(7672..8484)
                     /locus_tag="U1041_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM4768775.1"
                     /translation="MFDLSVFHYDFMQRAFLAIIAMSLFSPILGVFLILRRQSLMSDT
                     LSHVSLAGVAFGLVLGISPTLSTVLVVIVAAVFLEYLRTIYKNFMEIGTAILMSTGLA
                     ISLIVMNKSGGKSGLSLEQYLFGSIVTISQEQVIALFTIAVIVIVLTLLFLRPMYILT
                     FDEDTAFVDGLPVRAMSIAFNVVTGVAIALMIPAAGALLVSTIMVLPASIALRLGKSF
                     KAVIFTGMGIGFLGMVTGLLTSYYAETPASASITLIFISIFLLVNVVQKFKK"
     gene            complement(8477..9181)
                     /locus_tag="U1041_001677"
     CDS             complement(8477..9181)
                     /locus_tag="U1041_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM4768776.1"
                     /translation="MRYITVEDLSFYYDKEPVLEHIHYYLDSGEFVTLTGENGAAKTT
                     LIKATLGILKPKQGKVSIAEKSIKGKKLRMAYLPQQIASFNAGFPSTVYEFVKSGRYP
                     RQGWFRRLTAHDEEHVRISLESVGMWEHRDKRLGALSGGQKQRAVIARMFASDPDIFI
                     LDEPTTGMDAGTKDAFYQLMHHSAKKHGKSVLMITHDPDELNKYADRNIHLVRDQQSP
                     WRCFNVHEADEEVAHV"
     gene            complement(9182..9625)
                     /locus_tag="U1041_001678"
     CDS             complement(9182..9625)
                     /locus_tag="U1041_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent MarR family transcriptional
                     regulator"
                     /protein_id="HEM4768777.1"
                     /translation="MNRIALEIEKYLHEIVLSSENQLEILVGSCQSTVKLTNTQEHIL
                     MLIEKAAYTNTEIAKELNVSQAAITKATKSLVAKGLLVAVRDDKDARIVRFSLTEAAK
                     PIAAEHAHHHAHTLEAYEELLEHYSLEEQESIARFLSELVEKIRK"
     gene            complement(9926..10009)
                     /locus_tag="U1041_001679"
     tRNA            complement(9926..10009)
                     /locus_tag="U1041_001679"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9973..9975),aa:Leu,seq:caa)
     gene            complement(10021..10092)
                     /locus_tag="U1041_001680"
     tRNA            complement(10021..10092)
                     /locus_tag="U1041_001680"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10058..10060),aa:Gln,seq:ttg)
     gene            complement(10104..10176)
                     /locus_tag="U1041_001681"
     tRNA            complement(10104..10176)
                     /locus_tag="U1041_001681"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10141..10143),aa:His,seq:gtg)
     gene            complement(10184..10254)
                     /locus_tag="U1041_001682"
     tRNA            complement(10184..10254)
                     /locus_tag="U1041_001682"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10220..10222),aa:Trp,seq:cca)
BASE COUNT         3005 a         2477 c         1914 g         2875 t
ORIGIN      
        1 ctttcttgac agaatgtcga agaaagttca gacgtttacg acgccaaggg gtaaacaaag
       61 tcaaagttct acaggagtgt agcccgagtt caattatata cagccatgtg atgactaata
      121 ttcatccttt ttctgaattt ttagaatctt taagaatagg taacaattct caaaaaaatt
      181 cctcatagac acaaaaagag cagctaaatc ttcctttgaa aaagtttgat ttaactgctg
      241 caagccttgt ctggacaata tttcaaacaa gacacacgac aaataattta cactattata
      301 gcacaagtac taggaaaaat caaggtgaat cattattcgc ttgctcacta gttgctgttt
      361 gcgtttctga tgactggttc gtgttattag ctgaagaact cgttctactc cgagtcgaac
      421 tgcttcgttg ggttgagcta cttgatgttg gcgtttggga accgataatt gtattccaag
      481 cctgtgctcg gtcactatct gtccccccaa ccatgaagtt ataactcgtt actggtgcac
      541 catttttagc ccaataacta gttgtcatcg caccaccaac tgttacttgg cgcccattta
      601 cctgtgtcgt ccctgcacgt tgacctgtag aagcaacaac gctagaagca ataacactac
      661 tgtctaattc aaattttcct gcgaacatat ccgcattaac attgtaaagc gcatcaacca
      721 tataggccac atattgtgaa ttattgtggt agcctgtcca gacatacatt tctgagttat
      781 catcattccc agcccaggta cctaaagtta ctctaggggt tgatagcatg agccacacgt
      841 cattgacttc attacttgtt cccgtcttac cgacgaaatc agatgatgct gcctgtgggt
      901 ttaaaccact caatcgactc ttgaacgtcg tagtataacc agagttgaca acctgtctca
      961 aaagctggtt cataatactt gcagttgctt tagaatagac ctgaaccgga gccgcttcat
     1021 gctgatacac tactgttcca tcagaggcgg taatactctc aacgatgtaa tgtttgttat
     1081 aaacgccacc atttgccaaa gtttgatagg cattggtatt tgtcaatact gaaatttcaa
     1141 caccaccgcc caacggtaca ctttcaatat cgtacatagg aatatgataa ttcattttat
     1201 ccatgtacgc tttggcatct acacctgcat ttctcatcat cttataggtc caaaaagcag
     1261 gaatgttaac agaacggtca atagccgtct gtaagttcat cataccagta ccacgtcctg
     1321 aaccatacat aatcggttgt ccacttgaga agttcgttgg ataatcggaa aggatgctgg
     1381 cagaacctat caaaccttga tcaatcgcaa taccgtaagc taacagaggc ttgatggttg
     1441 acgctggcga acgaagggta tcaaaggcat ggttattttg gttggttgca taatcgcgac
     1501 cacccacaaa tcctaaaatg gctcctgtgg cattatcaat taagacacta cctgtctcga
     1561 catattcgtt tccatcatcc aaaacagagc cgtaatttgc cacaacagac tgcattgccg
     1621 catagattcc ttgatcaacg gtactcttaa tcgtatagcc gccttgactc aattcttgct
     1681 tagccaattc ttcataggaa gccttagttt catcgttttt caagtcattt tcagaaacct
     1741 tatcgcgttt taccagataa tcaaacataa cctcttgcgc ttcttccatg acctcgtagt
     1801 agagataatc tttcgtatcc gccattacag gagctggagc aataaaatct tgtttaatat
     1861 cgtaagcttt gtaggtttcg tattcttcct tggtcaagaa tgacgcccga tacatattaa
     1921 agagaacatc ttgatagcgt tcaataccgt aaatcatatc ttcatctgat ttacgtgttc
     1981 catctgatgc atagggagaa taaacaatcg gactttgagg taagcctgca ataaaagcag
     2041 cctgcggaac agtcaagtct ttcgctggtt taccaaaaat tccctgagcc gcagcttcta
     2101 cccctgcaat atttcgtccc tgattatttc gaccaaatgg agaaacattt aagtaaatgg
     2161 tcaaaatctc ttccttggtc atattccgct ctaatgccaa agccgaaaca atctcattag
     2221 ccttacgcgt aaaggttgga gcatctccga caagttgctg ttttatcaat tgctgcgtca
     2281 aggttgaacc accgctagat gaacctagac caactgatcc cagtgccgca cgcaaaacgg
     2341 ccttaggcac aaccccattg tgggtttcaa atgtttcatc ctctgtcgca attacagcct
     2401 gttttagata attcgagacc tcttccgaag taataggtac acgaagcaga tctgaattaa
     2461 cttccgacac caagctacca tccgaatagg taacggtgga aatccgacta acttctgaaa
     2521 ccttcgctac cagttcctct gttttgggaa tcttaacgtc atcaaaaaga ctaaccacga
     2581 aaccaattcc tatgcccgca ccaaaaagac cgaataggaa caccaagaca gctactgaat
     2641 tgaataataa tttcagcatc cgaaggaaaa ctcctactac atcccctagg cctagggcac
     2701 tgattttctt tttaaaatct tgcttatctg atttagtcgc catattaact ccttatcgtt
     2761 ccattatacc aaattttgtt tattttccgc aatttcgtgg tataataggg aggaattttt
     2821 taaaatgaag ttcggtccaa aaatcatata aaatgattta tggtcctgta tattaaacct
     2881 aaaggagaca gcccacatga acatttttga agaactaaaa gctcgtggct tggtctttca
     2941 aacgacagac gaagaagcct tggtaaaagc attgacagaa ggacaggttt cttattacac
     3001 tggatacgat ccaacagcag atagtttaca cttggggcac ttggttgcta tcttaaccag
     3061 ccgtcgcttg cagttagctg gccacaagcc ttacgcccta gttggcggtg caactggtct
     3121 gattggcgac ccttccttca aggatgcgga gcgcagcttg caaaccaaag ataccgtgga
     3181 cggttgggta acaaaaatcc aaggtcagct ctctcgcttc ttggattttg aaaatggtga
     3241 taataaggct gaaatggtca acaactacga ctggttctca gacatcagct ttatcgactt
     3301 ccttcgtgat gtcggtaaat actacacggt caactacatg atgagcaagg actctgtgaa
     3361 aaaacggatt gaaacaggga tttcctacac cgagtttgcc taccaaatca tgcagggtta
     3421 tgacttctac gagctcaatg acaagcacaa tgtgacccta caaataggtg gttctgacca
     3481 gtggggcaac atgacagcag gtactgaatt gcttcgccgc aaggctgaca agtctggtca
     3541 cgtgatgact gttcccctca tcactgactc aacaggtaag aagttcggta agtcagaggg
     3601 caacgctgtt tggttggatg cagacaagac ttcaccgtat gaaatgtacc aattctggct
     3661 caatgtcatg gatgacgatg ccgttcgttt cttgaaaatc tttactttct tgtcattaga
     3721 tgagatcgct gagattgaag aaaaatttga cgctgcccgt catgaacgcc tggctcagaa
     3781 gattttggct aaggaagtcg tgacattggt tcacggtgaa gaggcttata agcaagccct
     3841 taacatcacc gagcaattgt tcgcaggcaa tatcaaaaac ctatccgcaa aagagctcaa
     3901 gcagggtctc agcaacgtgc caaactacgc tgtacaggct gaagacaacc ttaacatcgt
     3961 ggaacttcta gttacctctg gtattgtcaa ctcaaaacgc caagctcgtg aggatgtagc
     4021 aaatggtgcc atttatgtca acggtgagcg tgtgcaggac ttggactata ccctttctga
     4081 cagtgacaag attgacggcg agttgaccgt tatccgccgc ggtaagaaaa aatattcagt
     4141 tttgacttat taagcgatga aaaataccaa gcaaaatcct aaaaatcaag aatttttgaa
     4201 cgactacttt gaacaaatgg ctcaggaagc cagtcttttg catcctgagt tagagcattt
     4261 gtctgccgat gaacgtcaag catttttgga ccaactctat cgtgaggatg agacacgtcg
     4321 tgccaaacgc ctgaaggaac atctggaggt gttctccgac gcagtgattg gggttatcat
     4381 caccatgatg ttgctggaaa ttcctttacc gagcgacact gttgatacac atcacttttt
     4441 cactggcatc ctcatcttct ttgtatcctt tttcatcgtg gcggattttt ggtatgacaa
     4501 ccacaagatt ctaggacaga ttgagcacgc aaccagcaaa atcttgattg ttcaattcaa
     4561 ctttatggca acgctggccc tcattcccct ctttactcgg tggatgatgg aaggcataac
     4621 caccacggct gttgttggtt atggggccgt gaccattgca gtcaatctct gtcaatccat
     4681 tttgaattac tttgtcctac aagaaaagtt tgccggaaca acatatacaa agcggtttgt
     4741 ttccatggca cacttacggc aattggtgac cgtcgccctt ttcaacatcg ttgttatcct
     4801 atttgcttac tttaatccga cacttgcctt ttatttctac attttgcggc caatcgtctc
     4861 cttcctagga gcagccttct tcgaaaagag acggcaggag cggaaagaaa aaatggcagt
     4921 tagagtaaat cacatataat tcccaaggaa atcctatgtg atttcctttt ctgctaacct
     4981 aggagaaaag acatgacctg cattttttgc caccaactca atgataatga cattctctac
     5041 cagacggagc atttcaaagt ggtctgggat attgaccccg tccaaacggg gcatctactg
     5101 attatcagca aggaacacta tgacacgctc agccaaatcc cttctgctgt tcgctatgat
     5161 atcggacttg gaagtctttt tggctgataa actctgtcaa gcattgacaa ttgacggtgt
     5221 gaccatagcc agcaacgacc gcttgtttga cgctggtacc catttccatg tccacctgat
     5281 tccacgcttt cgatcagacg gcttctggga ccaaatttca cttgcacaag tacagcttga
     5341 cctgaacgcc tttctcaaag cattataaaa agcagcccga cggctgcttt ttcgcttata
     5401 ccaactcttc cacttcataa atagtatcat ccagcacctc ttggtactgt tccaagtcat
     5461 aggctacaga ggttcccacc tccgccaact gctcttccag ctggattttc acctcttcca
     5521 ccccatccaa gtccaagagg tgattggtca catgcttgac acagttttgg cacgataagt
     5581 ttttcaattt caaggtttgc ttcatatttg ttctcctttt gcatgatgcc cacaggtaca
     5641 ttgccccgcc aagcattgac aagcgatttg ctcgggtgca gtcctttgta ggtgcgaaat
     5701 tttgctggcc agattttcta ggcttttttg ggaaaatgtc cctgtgtcta gcaagttttc
     5761 aaccaattgc ccctgtttgg tggaacatat ggtagctagc aagagctcca cctgcccctg
     5821 caaatgttcc tcttcactaa tcagcgggta gtagtggtac ttgctagttt ccttagccat
     5881 tctcaaatag tttttcttcc gcaaccgccc caagagtgtc ttaatggtcg tcgcttgcca
     5941 gtcaaaacct tcctgcaagg cctgaataat ttcctgagaa gtcgcaccag gatgggccca
     6001 cagaacccgc atgacctgcc actccgcagc tgaaattgtc tgctccacac attcacctcc
     6061 caacaataat tttctaactt tagtttacat ttgtagtcaa aaattgtcaa gaagaaagac
     6121 tgaacatctt gcccagtctt ctcattattc ttagtgagcc agcatctcct gaccaatttc
     6181 caaaccagtc aaaccaacag ggtagtatgt cggccagttt tccaactctt ccaatagctt
     6241 ttcttgactc tctccaccaa aatagatgtg gaaatgacct gttttaacag aggcaatatt
     6301 gtggtcactg aattgcacat acttgtagtt gccagcattt gcatccgttg cttcaaacaa
     6361 gaaacgaaca ccacgatttc cttttttgta ggtcaaaatc ttataaccca catacttata
     6421 cgtgaatttt tctttcttat ctcccactac aaattccatg gtattttctg taatgttgat
     6481 atggtccaca tctgtcttgt agccagtatc gtaataagcc ttgtactctt cagctgtcat
     6541 gtcaccttta atttttgcct tgtaatccca tacctgatct agcgtcccat caagcaagta
     6601 tggataaaca gattgccact cacctgcata gtctgataag gtgcggtctt tgacagcaga
     6661 atcttcaaag tagccattgt aaaccgtctg agccgtttcc gcaccgtctt ctggtaagat
     6721 ctctacacct gcttggctgg ttgttttttc cagagccgct aggttatctt ccataacaga
     6781 aatataatcc ttaccatctt tcatatcctc atccgtcaaa ctttcaagag gattaagaac
     6841 gtccaactga acccctgtct ctttggcaag tgtttcggct acagattttg atgcattttc
     6901 ttcaaaatag atatacttaa taccatattg cttgatatat tcagtcaatt cagccaaacg
     6961 agtcggagtt ggatcttcat ccgcagcaac acctgtaata gaaacttgtt tcaagccata
     7021 atccaaagct aagtaagcaa aggcagtgtg ttgagttacg aagtatttct gtttcgcagc
     7081 agataatgtt tcagaatatt tagcatccaa agcatctaat ttctcaatat aggctgccgc
     7141 atttgtttca aaagcatctt tcttttctgg gtatttagct accaaactat cacgaatatt
     7201 ttctacaagt gtgatggcac gttcaggaga caaccataca tgcggatcat aagcatggct
     7261 atggccttct tcactatggt cgtgttcctc cccttcttca ctacccggta acaagagcat
     7321 cccatccgtt gcactgataa tatttacttt ttcagtatca atcgacccct ctacatcatg
     7381 gacccatgtt tccatatttt cattttcata aacaaaagca tctgcttctt ggatgcgagc
     7441 aatatctttg gctgaaggct cataaccatg aacctccgtt ccagctttga ccaacaattc
     7501 aacatttgct tcatcacctg ttacctgctt ggtaaattcg taaacaggat aaaaggtcgt
     7561 tacaatattc aacttcccat cttcctgaga agctgtgcta ttgccacaag cagctaaaag
     7621 taaagctgat gcagataaga atagtaaacc aacttttttc atcttaactc cttatttttt
     7681 aaatttttga acaacattca ccagtaagaa aatactaatg aaaatcaagg taatacttgc
     7741 actcgctggg gtttctgcat agtaggaggt cagtaaacct gtcaccattc ccaagaaacc
     7801 aattcccatc cccgtaaaga taacagcttt aaaactctta ccaagtcgca atgcaataga
     7861 agcaggcaaa accataatcg ttgaaaccag caaagcacct gccgcaggga tcattaaggc
     7921 aatggcaaca ccagtcacca cattaaaggc aatggacata gctcgcacag gcaatccatc
     7981 tacaaatgcc gtatcctcgt caaaggtaag aatatacatc ggacgtaaaa acaacaatgt
     8041 cagcacgatg acaatcacag caatcgtaaa caaagcaatt acctgctcct gactaatggt
     8101 cactatcgaa ccaaacagat attgttccag gctaagccct gatttcccac cagatttatt
     8161 catgacaatg agcgaaatag ccaaaccagt cgacatgagg atagctgttc caatttccat
     8221 aaagttcttg taaatcgtac gcaaatactc taaaaataca gctgccacaa taacgacaag
     8281 aacagtcgaa agcgttggtg aaatccccaa taccaaacca aatgcaaccc cagccaacga
     8341 aacatgacta agagtatccg acatcaaact ctgccgtctg agtatcaaaa agactcccaa
     8401 aataggcgag aacaaactca tcgcaatgat tgcgaggaaa gcacgctgca taaagtcata
     8461 atgaaataca gatagatcaa acatgggcaa cctcctcatc cgcttcatga acattgaaac
     8521 aacgccaagg agactgctga tcacgaacca agtgaatgtt tcgatcagca tacttattca
     8581 gctcatcagg atcatgagtt atcatcaaaa ccgacttccc atgcttctta gccgaatggt
     8641 gcatgagctg gtaaaaagca tccttggtcc ctgcatccat ccctgttgtc ggttcatcca
     8701 gaataaaaat atctggatca gaggcaaaca tacgcgcaat gaccgcacgc tgcttctgcc
     8761 caccactcaa agcacctaag cgcttatccc gatgttccca catgccaact gattccaaac
     8821 taatccgaac atgttcctca tcatgggctg tcaaacgacg aaaccaacct tgtcgaggat
     8881 aacgccctga ttttacaaat tcgtaaaccg tgcttggaaa accagcatta aaacttgcaa
     8941 tttgctgagg taaataggcc attctcaact tcttaccctt tatactcttc tcagcaatag
     9001 aaaccttccc ttgtttgggc ttcaatatcc ccaaagtcgc cttaatgagg gttgtcttgg
     9061 ctgcgccatt ctcaccagtc aaagtcacaa attccccact atcaagataa taatgaatat
     9121 gttctaaaac cggttctttg tcgtagtaaa acgacaagtc ttccacagta atatatctca
     9181 tttattttct aatcttctcc actaactcac ttaagaatcg agcaattgac tcctgctctt
     9241 caagactata atgttccaaa agctcttcat aagcttccaa ggtatgcgcg tgatgatgag
     9301 catgctctgc agcaataggc ttagcagcct cagtcaaact aaagcgaaca atacgagcat
     9361 ccttatcatc tctaaccgcc accaataacc ccttagcaac taatgacttt gtagccttcg
     9421 tgatcgcagc ctgactaaca ttcaactcct tagcaatctc agtattagta tacgcagcct
     9481 tttcaataag catcaaaata tgctcctgcg tattcgtcaa cttcaccgtg ctttgacaag
     9541 aaccaaccaa aatctctaat tgattctccg aactcaaaac aatctcgtgc aggtacttct
     9601 caatttctaa tgcaatacga ttcataggca tccccttaac cttttaatta acttgttaag
     9661 tataccacat agaaaacaaa aaaacaagga aaatttactg aaaaagagta tatctattct
     9721 atctatccat agcaactcgt aatccttctt aataaaaaag aaacaccaaa aaagaggctg
     9781 ggcaaaaagt ttaatctcgc ttctcagggc tcgtgtcaac atctcaggtg ttagcttttc
     9841 gtctacccac tacagttgac aatgagccga gaaattacaa gcacaaaaca aaagacaagg
     9901 cttagaaacc ttgtctttta aactataccg gcggccgggg tcgaaccggc acgtccttgc
     9961 ggacactgga ttttgagtcc agcgcgtctg ccaattccgc cacgccggca tatagttgaa
    10021 ctggggtagc tggattcgaa ccaacgcatg agggagtcaa agtcccttgc cttaccgctt
    10081 ggcgataccc caatattaaa ataggcgagt gaggggaatc gaacccccga atgtcagagc
    10141 cacaatctga tgtgttaacc acttcaccac acccgccata taacacgggc agtaggaatt
    10201 gaacccacac tgaaggtttt ggagacctta gttctacctt taaactatgc ccgtaaaggt
    10261 atggagagag a
//
LOCUS       DASFQS010000077        10062 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.079, whole genome shotgun sequence.
ACCESSION   DASFQS010000077 DASFQS010000000
VERSION     DASFQS010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10062)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10062)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10062
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.079"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            103..981
                     /locus_tag="U1041_001683"
     CDS             103..981
                     /locus_tag="U1041_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4768778.1"
                     /translation="MIEVRALDKVIKGRPILSNISFEIKSGECVALIGPNGAGKTTLM
                     SCLLGDRKATKGQVLLDDLVPQARSNKETVAVLPQENAIPTDLKVKELLCFFQAIYKN
                     SLTDVEIDSLLCFSPEQKNQLAGKLSGGQKRLLAFVICLIGKPKLLFLDEPTAGMDTS
                     TRQRFWEIVHELKDQGVTIFYTSHYIEEVEHTAERILVLHQGRLLRDTTPFAMRSEEQ
                     EKEVTLPIAFAAVVESLAEINEISYKQDTVSFKTRAIEQVWASLQEAGCRISDLEVQN
                     KTLLNSLFDKTREEES"
     gene            978..1709
                     /locus_tag="U1041_001684"
     CDS             978..1709
                     /locus_tag="U1041_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4768779.1"
                     /translation="MKALVQVEAVKLSRSLGVFLLSIGMPVIFFLIFSSTVQFDDATM
                     QKAFIQSYMLTMTGFSMSGFALFTFPTMLAEDRKNSWLTFIQHSPLPIWQYYLSKLVR
                     VLLCFVSSIAIVFAVGGLVKGVDLSAQEWAVSAFLLLVTSIVFLAIGLLLVQIQSEQT
                     MSVVANLLYFVLAIMGGSWMPVSLFPDWVQRICKLMPSYHVNQLVTTYAQEGDFLWKS
                     LLIVLGYAIIFLGIALILNRKSEQQ"
     gene            1718..2812
                     /locus_tag="U1041_001685"
     CDS             1718..2812
                     /locus_tag="U1041_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4768780.1"
                     /translation="MIFEKRKVPLMFFVGMVFLYFPFYYAQYSPNPTAVVLATILFAL
                     VYCSLFYTDHKLYSMLAWFYLIGYIAVMSFWGNLQFSLFIFNLSNMLGWYYKENRPTY
                     RTVSYGILLLAIILWALFGPIPFEMRAFALVIHFFGLALLIFSWIETKRAALQQRLQE
                     QNASINLLLAENERNRIGQDLHDTLGHVFAMLSVKAELVQTLLDHDQIDQAKKEVVDL
                     QILAKDSMQEVRQIVQSLKQHTVAEELQILQQMLDLAGVDLVVLGGEIAEQLSLPVQN
                     KLAMVLRELANNLLKHSQASKCRLMFEKDQQELVLHYEDNGVGFAQLTGQELHTIKDR
                     LVTVKGSLEFLSLTKPTRLSIRIPFEEVVE"
     gene            2809..3411
                     /locus_tag="U1041_001686"
     CDS             2809..3411
                     /locus_tag="U1041_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4768781.1"
                     /translation="MRILVAEDQAMLRDALCQLLGFQDAVEAVLQAENGSQAIALLEK
                     EPVDVVLLDIEMPEKTGLDVLEWVRGQALPVKVVIMTTFKRPGYFERAVKADVDAYVL
                     KERSIADLMRTIETVLAGRKEYSPELMDILLTQRSPLTNLENQLLKLVAEGLSNKEIA
                     SQLHLSDGTVRNYMTSILSKLGAENRTAAVKVAQEKGWLV"
     gene            3516..3734
                     /locus_tag="U1041_001687"
     CDS             3516..3734
                     /locus_tag="U1041_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HEM4768782.1"
                     /translation="MKRLYDVQQLLKRFGIIVYMGNRLYDIEMMQIELNRVYQAGALD
                     RLEYMEAELVLRREHRLELEYQKSRENE"
     gene            3734..4120
                     /locus_tag="U1041_001688"
     CDS             3734..4120
                     /locus_tag="U1041_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM4768783.1"
                     /translation="METFWVFLVFLAVLGAWMGFNYWRLRRAATVIDNAEFAEKIHGG
                     QLIDLRDPSEFNRKHILGARNIPYQQLRQSTAALRKDRPVLIYENDRGQLVTPAALHL
                     KKQGFNEIYILSYGLNGWNGKVKTTK"
     gene            4177..4899
                     /locus_tag="U1041_001689"
     CDS             4177..4899
                     /locus_tag="U1041_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEM4768784.1"
                     /translation="MEKKFEKLSLAEIGIISFMGLILLISLGASWYKNAQSETSDTKT
                     VQQVPNQKKTVDTLFHDAENAVIVLEGTHTEEKLAEAQSAVNKVTDATKKAALQKRID
                     QVKELVGQQTDAQTQAKLKAELVRAEAAQKVADEKKVSETGTSQSTDLAEAIETSQES
                     YVVPNQNIYGNQSVSSTSQYTSSVASTSTSTSVPPTSEGAPVVETPTVSETPAETTDS
                     TTSLVESVETVPTADESSPDNP"
     gene            5205..5744
                     /gene="rsmD"
                     /locus_tag="U1041_001690"
     CDS             5205..5744
                     /gene="rsmD"
                     /locus_tag="U1041_001690"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEM4768785.1"
                     /translation="MRIVSGSYGGRPLKTLDGKTTRPTSDKVRGAMFNMIGPYFEGGR
                     VLDLYAGSGGLSIEAISRGMESAVLVERDRRAQAIIRENIAMTKEADKFQLLAMEARQ
                     ALNSVEGPFDLVFLDPPYAEQEIEDVITELCRRDLLADDVMVVCETDKAVSLPEEIAE
                     LGIWKEKLYGISKVTVYVR"
     gene            5734..6222
                     /gene="coaD"
                     /locus_tag="U1041_001691"
     CDS             5734..6222
                     /gene="coaD"
                     /locus_tag="U1041_001691"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEM4768786.1"
                     /translation="MSDKIGLFTGSFDPITNGHLDLIERASGLFDKLYVGVFTNPKKA
                     GLLTGLERKAILEKLFVGMENIEVVLSENELVVDVAKRYGVTHLVRGLRNATDLEYES
                     SFDFYNRQLAPDLETIYLIAKPELKFVSSSQVRELLYFKQDIGPYVPEIVSEEIRKNE
                     EK"
     gene            6209..7258
                     /locus_tag="U1041_001692"
     CDS             6209..7258
                     /locus_tag="U1041_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEM4768787.1"
                     /translation="MKKNRKLTLIVSIVLGTLLIWFAVFVRLPYYLESPGGAADIRQV
                     LTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDPYTTVRSSEEMTGGADNEEYFRI
                     AQFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
                     TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEV
                     QSSIPIDFQTGDIGGPSAGLMFTLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGG
                     ADKKVVSAAKSGASIFFVPNNPVDVEVLKEDPKAKTNYEEAKEAAEKAGLDIEVVPVK
                     TVQEAIDYLKKTKGE"
     gene            7446..8087
                     /locus_tag="U1041_001693"
     CDS             7446..8087
                     /locus_tag="U1041_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1027 domain-containing protein"
                     /protein_id="HEM4768788.1"
                     /translation="MKKEISPEMYNYNKYPGPSFARVGDKVVSENIELDLLEDYKNAF
                     DQTIFGQRFSQLMLKFDYIVGDWGNEQLRLRGFYTDDKNVKSDLKISRLDDYLTEYCN
                     FGCAYFVLANPNPQDLPAEEEDRPRRKRSRSRNRNRNQQRTEPIAPKENKSNRNDRQK
                     KGKQQNKQSEQRHFTMKNAGVKASQTERSQKRERKQSKREMNEVKRNFVIRQK"
     gene            8096..9208
                     /gene="rlmN"
                     /locus_tag="U1041_001694"
     CDS             8096..9208
                     /gene="rlmN"
                     /locus_tag="U1041_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEM4768789.1"
                     /translation="MKPSIYAFSQANLVDWILENGEKKFRATQIWEWLYRSRVQSFAE
                     MTNLPKSLIEKLEEHFVVNPLKQRIVQESKDGTIKYLFELPDGMLIETVLMHQHYGLS
                     VCVTTQVGCNIGCTFCASGLIPKQRDLTSGEIVAQIMLVQKYLDERNQNERVSHIVVM
                     GIGEPLDNYDNVMTFLRVVNDDKGLAIGARHITVSTSGLAPKIRDFAREGVQVNLAVS
                     LHAPNNDLRSSIMRINRRYPIEVLFEAIEDYIKVTNRRVTFEYIMLNEVNDGVEQAQE
                     LADLTKNIRKLSYINLIPYNPVSEHDQYSRSTKERTLAFFDVLKKNGVNCVVRQEHGT
                     DIDAACGQLRSNTLKKDREKARARIAAAKAKAGIRA"
     gene            9205..9729
                     /locus_tag="U1041_001695"
     CDS             9205..9729
                     /locus_tag="U1041_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM4768790.1"
                     /translation="MRKFFQADGNLTKLGRQICKTLAGAYALAIVLLCFLPQTWYPQY
                     KDFSTPGIIQIGRLYLLPTPFNSIVNGDKVDSLADLGWIFLQNITNIFLLFPLIFLLL
                     FLREEWRSLRAVIRYSFYISLFIECTQLLLDLLIDAGRVFEVDDLWTNTLGGVLAYTT
                     YKLWCRFCQGRTKQ"
BASE COUNT         2874 a         1919 c         2458 g         2811 t
ORIGIN      
        1 atgacatttg tcacatgagt caatgacaaa gtcttctagt gcgggcttca ttttcgagat
       61 atactatgta tgtaagatgt tcaagaagta ggaggtagaa agatgataga agtacgagca
      121 ctagacaaag ttatcaaagg acggccaatt ttgtctaata tttcctttga gataaagagc
      181 ggagaatgtg tggccttaat cggtccaaac ggggctggga aaacgacgct tatgtcttgt
      241 ttgttgggag ataggaaggc gacgaaaggc caggttttat tggacgatct ggttccacag
      301 gctcggtcca ataaagaaac agtagcagtc ttgcctcaag aaaatgctat cccgacagat
      361 ttgaaggtca aggaattact ctgctttttc caagccatct acaagaacag tctgacagat
      421 gtggaaatcg acagcctgct ctgcttttcc ccagagcaaa aaaatcaact ggccggcaag
      481 ctatcgggtg gtcagaaacg gctcttggct ttcgtcatct gtctgattgg caagcccaag
      541 ttgctctttt tggacgagcc gacggcgggc atggatacgt cgacccgtca gcgtttttgg
      601 gagattgtcc atgaactcaa ggatcagggt gtgactattt tttataccag ccactatatc
      661 gaggaagtgg agcatacggc ggagcggatt ttggtcttgc atcaggggcg gttactaaga
      721 gataccacgc catttgccat gcggagtgag gagcaagaaa aagaagtaac cctgccgatt
      781 gcctttgcgg cggtggtgga gagcttggct gaaatcaatg aaatcagcta caaacaagac
      841 acggttagct ttaagacccg agctattgag caggtttggg ctagcttgca ggaggcaggt
      901 tgtcggattt cagatttaga ggtacagaac aaaaccctgc tcaacagcct atttgacaag
      961 acaagggagg aagaatcatg aaagcattag ttcaagtaga ggcggtaaaa ttatccagaa
     1021 gtttgggagt atttctcctg tctatcggca tgcccgtcat ctttttcctg attttctcat
     1081 caacggtcca gtttgatgat gcgaccatgc aaaaggcttt tatccagtcc tacatgctga
     1141 ccatgacagg tttttccatg tcgggctttg cccttttcac ctttcccacg atgctggcag
     1201 aggacagaaa aaatagctgg ttaaccttta tccagcattc gcccttgcca atctggcaat
     1261 actatctttc caaactcgtg cgggttttgc tctgctttgt gtcttctatt gccattgtct
     1321 ttgcggtcgg aggtttggtc aagggagtag acttgtctgc tcaggaatgg gcagtatcag
     1381 ctttcttgct ccttgtaacc tctatcgtat ttttagccat tggattgctt ttggtgcaaa
     1441 ttcagtcgga acaaaccatg tcggtggtgg caaacttgct ctactttgtt ctggcaatta
     1501 tgggtggctc ttggatgcct gtttccctct ttccagactg ggtgcagcgg atttgcaaac
     1561 ttatgcctag ctaccatgtc aatcagctgg tgaccaccta tgcccaagag ggagattttc
     1621 tctggaaatc cttgctaatt gtcctaggct atgcgataat tttcttagga attgctctga
     1681 tactgaatag aaaatcggag cagcagtgag gtgacagatg atatttgaaa aaagaaaggt
     1741 accgctcatg ttcttcgtgg gcatggtctt tctctatttt cccttttact atgcccagta
     1801 tagtcccaat ccgacggcag ttgtcctagc gactattctc tttgccttgg tctattgctc
     1861 cctcttttat accgaccaca agctctattc catgctggct tggttttacc tgattggcta
     1921 tatcgccgtc atgagctttt ggggcaatct gcaattttca ctctttattt tcaacctgtc
     1981 caatatgctg ggctggtatt ataaagagaa tcgaccgacc tatcggacgg tgtcttacgg
     2041 gattttgttg ctggctatta tcctatgggc tctctttggt cctatccctt ttgagatgcg
     2101 agcttttgca cttgttattc actttttcgg cttggccttg ctgattttca gctggattga
     2161 gaccaaacgg gcggcccttc agcaacgcct acaggagcag aatgcgtcca tcaatctcct
     2221 gctggctgag aatgaacgca accgtatcgg tcaggacttg cacgacacac ttggtcatgt
     2281 ctttgccatg ctgtctgtca aggccgagct ggtccagact ttgttagacc acgaccagat
     2341 tgaccaggcc aagaaggagg tggtagacct tcagatttta gctaaggatt ccatgcagga
     2401 ggtccgccag attgtccagt ccctcaagca gcataccgtt gcagaggaac tccagatttt
     2461 acagcagatg ttggacttgg caggggtgga tttggtcgtc ttgggtgggg aaatagcaga
     2521 gcagctcagc ttacccgtcc agaacaagct ggctatggtg ctgagagagt tggccaacaa
     2581 cctgctcaag cacagccagg ctagcaaatg ccgtttgatg tttgaaaaag accagcaaga
     2641 attggttttg cactacgaag acaacggtgt gggctttgcc caattgactg gtcaggaatt
     2701 gcataccata aaagacaggt tggtgacggt gaaaggaagt ttggaatttc tttctctgac
     2761 caagcccacc cgcctgtcca tccgaattcc gtttgaggag gtggtagaat gagaatctta
     2821 gtcgcagaag accaagcaat gctgcgggac gccctctgtc agctcttggg ctttcaagat
     2881 gcggttgagg ctgttttaca ggcagaaaac ggcagtcagg ccattgctct tttggaaaaa
     2941 gagccagtag atgtggtgct cttagatata gaaatgcctg aaaagacggg cctggatgtc
     3001 ttggaatggg tgcgggggca agccttgcct gtcaaggttg tcatcatgac caccttcaag
     3061 cgaccgggct atttcgagcg ggcagtcaag gcagatgtgg atgcctatgt gctcaaggaa
     3121 cgctccatcg cagacctcat gcggaccatt gaaacggtct tggcggggcg gaaggaatat
     3181 tcaccagagt tgatggacat tctcctgacc caacgcagtc ccttaaccaa cttggaaaat
     3241 caactactca agctggtggc agagggtctg tccaataagg aaatcgccag ccagctccac
     3301 ctgtctgacg gcacagtccg caactacatg acctctatcc tgtccaaact gggagcagaa
     3361 aaccgtaccg ctgccgttaa ggtggcacag gaaaagggtt ggttagtata aacgaatgag
     3421 attggggaga acccaatctt ttttgatgaa tgcagggaaa cagcacttga gtttttatat
     3481 tgaaaatctt cggatattct gctaaaattt actatatgaa acgactatac gatgtgcaac
     3541 agttgctaaa acggtttggt ataattgtct atatgggcaa ccgtctctat gacatcgaga
     3601 tgatgcagat agagctcaat cgggtatatc aggcaggagc cttagacaga ctggaataca
     3661 tggaagccga attggtcttg cgacgggaac atcgtttgga attagagtat cagaaatcaa
     3721 gggagaatga gtgatggaaa cattttgggt atttttagta tttttggcag tattgggagc
     3781 ctggatgggt tttaattact ggagattgcg tcgtgcagcg acggtgattg ataatgcaga
     3841 atttgcagaa aagatacacg gaggtcagtt gattgacctg cgagacccga gtgagtttaa
     3901 tcgtaagcat atcttaggtg cgagaaatat tccttaccag caattgcgcc agtctacagc
     3961 tgctttgcgt aaggacagac ctgtcttaat ctatgagaat gatcgtggtc agttggtaac
     4021 gcctgcagcc cttcatctga agaaacaggg ctttaacgaa atctatattt taagctatgg
     4081 tctaaacgga tggaatggta aggtaaaaac gactaagtag cattgtcagt agactagagt
     4141 attttcttat gcaataagac ggataagggc aaaaatatgg agaagaaatt tgaaaagttg
     4201 tcattggcag aaattggcat tatttctttt atgggactta ttttattgat tagcttaggc
     4261 gctagttggt ataaaaatgc tcaaagcgaa acaagtgata caaagacagt acagcaagtg
     4321 cccaatcaga aaaaaacggt tgatacatta tttcatgatg ctgagaatgc tgtcattgta
     4381 ttagaaggaa cacatactga agagaaactt gcagaggcac aatctgcagt aaacaaggtt
     4441 acggatgcga ctaaaaaagc agcattacag aaacggattg accaagtaaa agagctagtg
     4501 ggacagcaga cagatgctca aacacaggct aagctaaaag cggagttggt cagggcggaa
     4561 gcagcccaaa aagtagctga tgagaaaaaa gtatctgaaa cagggactag tcagtcaacg
     4621 gaccttgctg aagctattga aacctcacaa gaatcctatg tagtgcctaa tcaaaatata
     4681 tatggaaacc aaagcgtgag ttcaacaagc cagtatacaa gtagcgtggc gtcaactagt
     4741 acaagtactt cagtccctcc gactagtgaa ggagcacctg tggtagaaac tccaacagtt
     4801 tctgaaacac cggcggaaac gacggattca acaactagcc tggttgagtc agtagaaaca
     4861 gttccaacag ctgacgagag ttcaccagat aatccgtagg ctttttaact actggttctt
     4921 tatggcgtat taacatacta gaaaaatagc tatttgtatt tcaacaccaa tttttcttgt
     4981 aacgatctag tttaaataca tacgataaga gtgaggaatt tcgcgtaaaa cagaatttcc
     5041 ttgcttttta tttttaccat tttgttgaat agtgcgagaa tgatttcctg ctatagcggt
     5101 tgagagtgta tttggtagaa ggttgaaaaa gttggtgcaa aaaggaaagc aggaagtgca
     5161 cttggtttca gcaacgatct tcattttttg ctataatata ccttatgaga attgtatcgg
     5221 gaagctatgg tggaagacca ctgaaaacgt tagatggaaa aacaaccaga ccgacatcgg
     5281 ataaggtccg tggggccatg ttcaatatga ttggtcccta ttttgagggt ggtagagttc
     5341 ttgacttgta cgccggcagt ggtggtttat ctatcgaggc tatatctcgt ggcatggagt
     5401 cagcagttct ggttgagcga gatcgacgag cacaagccat tatccgtgaa aatattgcaa
     5461 tgactaagga agcagataaa tttcagcttc tagcaatgga agctagacag gcattgaaca
     5521 gtgtggaagg gcctttcgac ctggtattct tggaccctcc ttatgcagag caggaaattg
     5581 aagatgtgat aacagaactt tgtcgccgtg acttactagc agatgatgtt atggtagtct
     5641 gcgaaacgga taaggcggtc tctcttccgg aggaaatagc agagctgggg atatggaaag
     5701 aaaaactcta cggaattagt aaggtaacag tatatgtcag ataagattgg attgtttacg
     5761 ggctcatttg accccattac caatggacac ttggacttaa ttgaacgagc gagtggacta
     5821 tttgataaat tatatgtggg agtttttacc aatcctaaaa aggcaggact cttgacaggc
     5881 ttggagagaa aagccatttt ggagaagctt tttgtaggaa tggagaatat cgaggtcgtt
     5941 ctgtctgaaa atgaattggt agtcgatgta gctaagcgct atggagtaac acatttggtc
     6001 cgaggattgc gtaatgcgac cgatttggaa tacgagtcaa gttttgattt ttacaatcgt
     6061 cagttggcgc cagatttgga aactatttat ttaatcgcca agccagagct taagttcgta
     6121 tcatccagcc aggttcgaga attgctgtat ttcaaacagg atataggccc ttatgttcca
     6181 gaaattgtta gtgaggagat tagaaagaat gaagaaaaat aggaagttaa ccttaattgt
     6241 atctattgtt ttaggaactc ttttgatttg gtttgccgtt tttgttcgtc tgccttatta
     6301 tttggaaagt ccaggtggag ctgccgatat tcgtcaggta ctaacggtga acaatcaaat
     6361 agaccaagag gatgggtctt acaacttcac ctatgtatca gtccaacaag ctacagcttt
     6421 acaactattc gctgctcagt ttgatcccta tacgacagtt cgttcctctg aagagatgac
     6481 aggaggggcc gacaatgaag agtatttccg tatagcacag ttttacatgg agacatcgca
     6541 aaatatggcg aagtaccaag gtttgacctt ggcaggaaaa gaagtcaatc ttgatttctt
     6601 tggtgtctat gtacttgcct tggcggatga ttcgaccttt aaaaaagttc ttaatattgc
     6661 tgacactgtt gtgagtatca atggaaaaac atttgagtct tctcctgatt tgattaaata
     6721 tgtgagtggc ttggaacttg gaagtgatgt aacagttggt tatattagcg ctggtcagga
     6781 aaaatctgcg gacggtaaga ttatcaaatt gtctaatgga aaaaacggaa taggcatcac
     6841 tcttgtagat catacagagg ttcaaagttc gattccgatt gatttccaaa cgggagatat
     6901 tggtggtcca agtgctggtc tgatgtttac acttgccatc tatactcaac tcgcagagcc
     6961 tgacttacgt gatggtcgaa ttattgctgg tacggggact atcgagcagg atggaaaagt
     7021 aggtgacatt ggtggggctg ataagaaggt tgtttcggca gctaagtcag gtgcaagtat
     7081 ctttttcgta ccaaataatc cagttgatgt ggaagttttg aaggaagatc caaaggctaa
     7141 aaccaactat gaggaagcta aagaagctgc ggagaaagca ggattggata ttgaggtggt
     7201 tcctgtgaaa actgttcaag aggctattga ttatttgaag aaaacgaagg gcgagtaaat
     7261 cgtccttttt tgctagagaa taatattata attgtcagaa atttctccta aatggtaaag
     7321 tagaagaatt tccagataaa tcgtgttata atgataaggt taagtgtgag aatttagatt
     7381 ctgaccagat agattattaa tcaaatgatt tttacgtatg aagattttat aagataggag
     7441 gacaaatgaa aaaagaaatt tcacctgaaa tgtataacta taataaatac cctggtccga
     7501 gttttgctcg tgtcggagat aaggttgtat ctgaaaatat tgaattggac cttttggaag
     7561 attacaagaa tgcttttgat cagacgattt ttggtcaacg tttttcacaa ctcatgctca
     7621 aatttgatta tattgtggga gattggggca atgagcagct gagattaagg ggattctata
     7681 cagacgataa aaatgttaaa tcagacttaa aaatcagccg cttggacgac tatttgacgg
     7741 agtattgtaa ttttggttgt gcttatttcg tcttagccaa tccgaatcca caagacttgc
     7801 ctgctgagga ggaggataga ccgcgtcgga agcggagtcg ttctcgcaat cggaacagaa
     7861 atcagcagcg gacggagcct attgcgccaa aagaaaacaa aagtaatcgc aatgaccgtc
     7921 agaaaaaagg gaagcagcaa aacaaacagt cggaacagcg tcattttact atgaagaatg
     7981 ctggtgttaa ggcgagtcaa acggagcgtt ctcaaaaacg tgagcgtaag cagagcaagc
     8041 gtgagatgaa tgaagtgaag cgtaactttg ttatccgcca gaaataggga gaaatatgaa
     8101 accatcaatt tatgcattta gtcaagccaa tctggttgat tggattttag aaaacggaga
     8161 gaagaagttc cgtgccactc aaatttggga atggctttac cgttctcgtg tccaatcttt
     8221 tgcggaaatg accaacttgc caaaatcttt gattgaaaag ttggaagaac attttgtagt
     8281 taatccgctc aaacaacgga ttgtacagga gtctaaggac ggtactatca aatacctttt
     8341 tgaactgcca gatggcatgt tgattgagac agttctcatg caccagcact atggcctttc
     8401 agtctgtgta acgacacaag ttggctgtaa tatcggctgt acattctgtg catctggatt
     8461 gattcctaag caacgtgact tgactagcgg tgagattgtg gctcagatta tgttggtaca
     8521 aaagtacttg gatgagcgca atcagaatga gcgtgttagc catatcgttg tgatggggat
     8581 tggtgaaccg cttgataact acgataatgt tatgaccttc ttgcgagtgg ttaatgacga
     8641 caagggcttg gcaattggtg cccgtcacat cacggtatcc acttctggtt tggcaccaaa
     8701 aatccgtgac tttgcacgtg aaggtgtcca agttaacttg gctgtctcac tccatgcgcc
     8761 aaataacgac cttcgttcaa gcattatgcg gatcaaccgc cgttatccaa tcgaggtctt
     8821 gttcgaggca atcgaagact atatcaaggt gaccaaccgc cgtgtgacct ttgagtacat
     8881 catgcttaat gaggtcaacg atggagtgga acaggcacag gaattagctg atttgaccaa
     8941 gaacatccgt aaattgtctt atatcaactt gattccttat aacccagtta gtgaacatga
     9001 ccagtacagt cgttcaacca aggaacggac cttggcattc tttgatgttt tgaagaaaaa
     9061 tggggtcaac tgtgtcgttc gtcaggaaca tggtacagat attgatgctg cctgtggtca
     9121 attgcgctcc aatacgctca aaaaagaccg tgaaaaagca cgtgctcgca tcgccgcagc
     9181 caaagccaag gcaggtattc gagcatgaga aaattcttcc aagcagatgg aaacttgacc
     9241 aagctaggaa gacagatttg taagacctta gctggagcct atgctctggc tattgtctta
     9301 ctttgttttc tacctcagac ttggtaccca caatataagg atttctcgac cccaggaatt
     9361 attcaaatcg gccgtctcta tcttttacca actcctttca acagcatcgt caacggggac
     9421 aaggtagata gtttggcgga cctagggtgg attttcttgc aaaacatcac taatattttt
     9481 ctacttttcc ctctgatttt tcttcttttg tttcttaggg aagaatggcg gagccttcga
     9541 gcggtaattc gttatagttt ttatatcagt ctttttattg aatgcaccca gcttctgttg
     9601 gacctcctga tcgatgctgg tcgggtcttt gaagtggatg atctctggac taatacatta
     9661 ggcggtgtgt tggcttatac aacctataaa ctgtggtgta gattctgtca aggaagaact
     9721 aaacagtaat tttcagattt tttagaaaat tttaaaaaat ctattgacaa tcttgagtag
     9781 ataccgtata atctctttaa atcagaagaa gtaataaagc agaagtcttc agggagcctg
     9841 tggtactggg aacaggtggc ggagttttat gaaatgggct gatatgcatt tatgtctatt
     9901 ttatgacgtc gttagtcggt cttgccgtac catcagtact gccttcaccc gactgcctag
     9961 tcctaaaatg ccctaaattc acaatgattg tttgctgtag cttcctttga gtaatcagcc
    10021 aaaacagtca cacaaatgaa cttaaaacaa tgatagttcg gt
//
LOCUS       DASFQS010000078         9894 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.080, whole genome shotgun sequence.
ACCESSION   DASFQS010000078 DASFQS010000000
VERSION     DASFQS010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9894
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.080"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            211..906
                     /locus_tag="U1041_001696"
     CDS             211..906
                     /locus_tag="U1041_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenate--cysteine ligase"
                     /protein_id="HEM4768791.1"
                     /translation="MKLLITSGGTSEAIDQVRAITNHASGNLGKIIAEQALKRGHEVT
                     LVTTRQAVKPDSQKNLTIIEITNVDSLKETLEPLVKSHQALIHSMAVSDYTPIYMAGL
                     DELRATEDISSLLKKQNTESKISSKDDYQVLFLKKTPKVISYVKKWKPAITLFGFKLL
                     VNVPKEELFAVARQSIERNGADYILANDLKDIGENQHIAYLVDKTREIQAQTKDEIAQ
                     LILNTLEKGEQNG"
     gene            899..1447
                     /gene="coaC"
                     /locus_tag="U1041_001697"
     CDS             899..1447
                     /gene="coaC"
                     /locus_tag="U1041_001697"
                     /EC_number="4.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenoylcysteine decarboxylase"
                     /protein_id="HEM4768792.1"
                     /translation="MANITLAVTGSISAYKAADLTSQLTKLGHQVTVLMSRSAMDFIT
                     PLTLQSLSKNLVHTDVMIEENPTLIKHIDIAKETDVFLVAPASANTIAKLANGMADNI
                     ITATALALPIGTKKLLAPAMNTNMYLNPATQKNIKTLIEYGFEEIKPREALLACGDFG
                     TGALAEVTDILEKVSNTLDEKK"
     gene            1434..2003
                     /locus_tag="U1041_001698"
     CDS             1434..2003
                     /locus_tag="U1041_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4768793.1"
                     /translation="MKKNKSTQIATIAIFFAVMIVINILSSIIFNILPVPIKPTIVHI
                     PVIIASIIYGPRVGACLGALMGLMSMIHNTIILLPTSYLFSPFVENGNVYSIIIAVVP
                     RILVGITPYFVYKWIKNRKGLFIAGAIGSMTNTIFVLGGIFFLFSSVFDGNIQAMLAT
                     VLGTNSIAEMIISSVLTAALVPTLQKIQK"
     gene            2094..3812
                     /locus_tag="U1041_001699"
     CDS             2094..3812
                     /locus_tag="U1041_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEM4768794.1"
                     /translation="MTYQETYQTWLDFADLPDYLREELVAMDEKTKEDAFYTNLEFGT
                     AGMRGYIGAGTNRINVFVVRQATEGLAKLVESKGEEAKKRGVAIAYDSRHFSPEFAFE
                     SAQVLAAHGIKSYVFESLRPTPELSFAVRHYNAIAGIMVTASHNPKEFNGYKVYGEDG
                     GQMPPADADALTNFIRAIDNPFAVELADLEASKGNGLITVLGEETDVKYLEELKDLNI
                     NPELIAEYGKDMKIVYTPLHGTGEMLARRALAQAGFESVQVVEAQATADPDFSTVASP
                     NPESQAAFALAEELGREVGADVLLATDPDADRVGVEVRQADGSYWNLSGNQIGAIIAK
                     YILEAHKQAGTLPANAALAKSIVSTELVTKIAESYGATMFNVLTGFKFIAEKIQEFEE
                     KHNHTYMFGFEESFGYLIKPFVRDKDAIQAVLMVAEIAAYYRSRGMTLADGIDEIFKE
                     YGYFAEKTISVTLSGKDGAEQIKAIMAKFRDNSPAQFNATDIAFFEDFALQTKTDKDG
                     NVEKLTTPPSDVLKYTLADDSWFAVRPSGTEPKIKFYIATVGETLAEAEEKIANIEKE
                     INEFVG"
     gene            complement(3883..4182)
                     /locus_tag="U1041_001700"
                     /pseudo
     CDS             complement(3883..4182)
                     /locus_tag="U1041_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943594.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            complement(4196..4621)
                     /locus_tag="U1041_001701"
     CDS             complement(4196..4621)
                     /locus_tag="U1041_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4768795.1"
                     /translation="MIRKFQNEDIETIVQLWLTGNVETHAFIPAEYWESKIDFVISQL
                     LDAEIYVYVIEERIVGLIGMQGTYLAGIFVSKDLRSNGFGRELLNFVKAIHPTLQLNV
                     YQKNQKVISFYLREGFSIISENIDEDTQEVELFMSWTNL"
     gene            complement(5114..5833)
                     /locus_tag="U1041_001702"
     CDS             complement(5114..5833)
                     /locus_tag="U1041_001702"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768796.1"
                     /translation="MTKHEDFINSPIESVMMEALSAISSINTGIETYPLNEYLLKTIF
                     LQMTGFQEQKFKCIVWEMATEDFEFRRDFLRDYATQGFSTYDSKKSIYQKLMILLDRD
                     EFSESDRKVIVEEAKDIVCKIFDESNIQYWNGNAFIEFKGNIKNKIGYKCIARKGTGY
                     NLLESEGQKAYDKLYRHRNRLAHNTLSYQRNLPTLLELENKEFGDSNYFIWFYILIVI
                     DKIMIKLFNEFNKATKRLLDI"
     gene            complement(5830..7113)
                     /locus_tag="U1041_001703"
     CDS             complement(5830..7113)
                     /locus_tag="U1041_001703"
                     /inference="COORDINATES: protein motif:HMM:NF015210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HEM4768797.1"
                     /translation="MENKVYYGEYSLDYWIELILSKNIILPEYQRNFSWDEAKRKKLI
                     ASLKNKEFVPPVTIGSFTKNGVKENLLIDGQQRLTSILLSVLGFFPDRETYKMHTKNK
                     VRKYIDENDDFAGDTDSFTDVINWSFNDLLKEDNLTISKIKSNLEKDKSFKALNNDDE
                     IDRHFLKNTFLGFSYLVPNNTQRGDQQRYYSSVFRNINRQGMALTGQESREALYYLDD
                     SKTDFFKPEFIKLIEGDLSIDFIRYLSILSEYKKNNSAQNLCSGFGGKKEKLEEYYEN
                     YINFIIGDKNDNTIEIYISYEELFESNEQLPSGELPHSRYYQNLWDIISNSRLSKTSF
                     ESIIDCDMYYFGLIYLIIFEKKVIDSQNWPSIKEKLNKQISDYKAPYLDKQGIPTYDH
                     LKGVYSSYHQKNPSALKYLRERVEKSIEIYREYGL"
     gene            complement(7215..8567)
                     /locus_tag="U1041_001704"
     CDS             complement(7215..8567)
                     /locus_tag="U1041_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001868246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4768798.1"
                     /translation="MQTSVQHQVRKKIKVAAYCRVSTDQEEQLSSYENQVNYYREFIS
                     KHEDYELVDIYADEGISATNTKKRDAFNRLIQDCRAGKVDRILVKSISRFARNTLDCI
                     KYVRELKELGVGVTFEKENIDSLDSKGEVLLTILSSLAQDESRSISENATWGIRKKFE
                     RGEVRVNTTKFMGYDKDENGRLIINPRQAETVKYIYEKFLEGYSPESIAKYLNDNEIP
                     GWTGKANWYPSAIQKMLQNEKYKGDALLQKTFTVDFLTKKRIANDGQVNQYYVENSHE
                     AIIDKDTWELVQLELARRKAYREEHQLKSYIMQNDDNPFTTKVFCKECGSAFGRKNWT
                     TSRGKRKVWQCNNRYRVKGQIGCQNNHIDEETLEKAVVMAVELLSENVDLLHGKWNKI
                     LEENRPLEKHYSTKLAEVINKPSWEFDSYEMCQVLDSITISEDGQISVKFLEGTEVDL
                     "
     gene            complement(8470..9711)
                     /locus_tag="U1041_001705"
     CDS             complement(8470..9711)
                     /locus_tag="U1041_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4768799.1"
                     /translation="MSVKKIRVNRQKHRKRVCAYIRVSTTNGSQLESLENQKQYFENL
                     YSNRDDIDFVGVYHDRGISGSKDNRPNFQAMIEDCRKGMIDIIHTKSIARFARNTVTV
                     LEISRELKAIGVDIFFEEQNIHTLSSEGEVMLSVLASIAEDELRSMSGNQRWAFQKKF
                     QRGELVINTKRFLGYDLDENGELIINPEEALIVRQIFALYLEGYGTHRIAKLLNEKGV
                     ATVTGAKWHDTTIRQMLSNEKYNGSVLLQKYFHDGVNGPKKLNQGELEQYFIEDNHEA
                     IISMEDWQAVQDKLISRRWQQGRNKTYKFTGLLKCQHCGSTLKRQVSYKKKIVWCCSK
                     YIKEGKATCQGMRVPEVDISNWEITSTVTVIERDRNGEKYYSYSGQESADQCSTSGQE
                     ENQSSRILSSVHRPRRTAIKL"
BASE COUNT         3018 a         2089 c         1562 g         3225 t
ORIGIN      
        1 agtttacttt tagtacgagg caatgagccg caggcataac tgaagttagg caaggcgagt
       61 taacgaagta ataaaagaaa aactaaatga cgacaataca ggcccttata ttttttgtat
      121 tagcagcatc attttccagt gtcacagatt gattagcaaa tagattagtg caaactttac
      181 gaaaaataga aattctagta aaatatgaac atgaaactat tgattacatc aggcggaaca
      241 agcgaagcta tcgatcaagt ccgcgctatt acaaaccatg cttctggaaa tcttggaaaa
      301 atcattgccg aacaagcctt gaaacgcggt catgaagtta ctcttgtgac tacaagacag
      361 gctgttaaac cagattctca gaagaattta acaattatcg aaatcacaaa tgttgatagt
      421 ttgaaagaaa cattagaacc tttagtcaaa tcacatcagg ctctgattca tagcatggct
      481 gtatccgatt atacacctat ttatatggct ggtttagatg aactaagagc aactgaagac
      541 atttctagtc tactgaaaaa acagaataca gaaagtaaga tttcatccaa ggatgactac
      601 caagttcttt tcttgaaaaa aactcccaag gtcatttcct atgtaaaaaa atggaagcca
      661 gctatcacac tctttggctt caaactattg gttaatgttc ctaaggagga attatttgcc
      721 gtagctcgcc aaagcattga acgaaatggc gctgattata tacttgctaa tgacttgaag
      781 gatattggag aaaatcaaca cattgcctat ttggttgata aaacaaggga gattcaagca
      841 cagacaaaag atgaaattgc tcagctcatt ttaaataccc tagaaaaagg agaacaaaat
      901 ggctaatatc acacttgccg ttactggctc tatttcagcc tacaaagcag ctgacctaac
      961 tagtcaattg accaagctcg gtcatcaggt tacagtcctc atgagtcgct ctgctatgga
     1021 cttcatcaca cctttgactc tccaatcctt gtcaaaaaat ctggttcaca cagatgtcat
     1081 gattgaagaa aatcctactc ttatcaagca tatcgatatt gccaaagaaa cagacgtatt
     1141 tttagttgcc cctgcttctg ccaatacgat agctaaatta gctaatggta tggctgacaa
     1201 cattattact gcaacagctc tggctctgcc aattggtact aaaaaactgc tggcacctgc
     1261 tatgaatact aacatgtacc tcaatcctgc tacccagaaa aatatcaaaa ccctcataga
     1321 gtatggtttt gaggaaatca aaccgcgtga agccctgctt gcttgtggag attttggaac
     1381 tggggccttg gctgaggtaa ctgatatttt agagaaagtg agtaacaccc ttgatgaaaa
     1441 aaaataaatc aactcaaatt gctacaattg caatcttctt tgctgtcatg attgtcatca
     1501 atatattgag ttcaattatt tttaatatat tgcctgttcc aataaaaccc accatcgtac
     1561 atatcccagt cattattgct tctattatat acgggccacg tgttggggct tgtttggggg
     1621 ctctcatggg cttaatgagt atgatccata atactattat cttactacca accagctatc
     1681 ttttctcccc atttgttgaa aatggtaatg tttattcaat catcattgca gttgtcccac
     1741 gtatattagt cgggattaca ccttatttcg tctacaaatg gataaaaaat cgtaaaggat
     1801 tatttattgc tggtgcaatt ggttcaatga ccaatactat ttttgtactt ggaggtattt
     1861 tcttcctctt ctcctctgtc tttgatggta atattcaagc aatgttagca accgttttag
     1921 gtaccaattc aattgcagaa atgatcattt cttctgtatt aactgcagcg cttgttccaa
     1981 ctttacagaa aattcaaaaa taaatatcag aaaatcatgt gaaagcgtga tttttctttt
     2041 caaacatggt ataatgaaag cgtttaatag aaaaattttt aaggagatat gcgatgactt
     2101 atcaagaaac ctatcaaaca tggctcgact ttgcggacct tccagattac ttgcgtgaag
     2161 aattagtcgc aatggatgaa aaaacaaaag aagatgcctt ctatacaaat cttgaatttg
     2221 gtacagctgg tatgcgtggt tatattggcg ctggtactaa ccgtatcaac gtattcgtcg
     2281 tgcgtcaagc tacagaaggt ttggctaaat tggtagaatc aaaaggtgaa gaagcgaaaa
     2341 aacgtggtgt tgccatcgct tacgactcac gtcacttctc tccagaattt gcctttgaat
     2401 cggctcaagt cttggccgca catggcatca aatcctatgt atttgaaagc cttcgtccaa
     2461 ctcctgagtt gtcatttgca gttcgccatt acaatgccat cgcaggtatc atggtgactg
     2521 ccagccacaa ccctaaagaa ttcaacggct acaaggttta cggtgaagac ggcggacaaa
     2581 tgccacctgc tgatgcagat gctcttacta acttcatccg tgccattgac aatccatttg
     2641 cagttgaatt ggctgacctt gaagcaagta aaggaaatgg cttgattacg gttcttggcg
     2701 aagaaactga cgttaaatat cttgaagaac tcaaagacct caacatcaac cctgaactga
     2761 ttgctgaata cggtaaagac atgaagattg tctacactcc gcttcatggt actggtgaaa
     2821 tgttggctcg tcgtgccctt gcacaggctg gttttgagtc tgttcaagtt gtggaagcac
     2881 aggcaactgc tgaccctgac ttctctactg tcgcttcacc aaacccagaa agccaagctg
     2941 cttttgccct tgcggaagaa ttgggccgtg aagtcggtgc agatgtcctt cttgcaactg
     3001 acccagatgc tgaccgtgtt ggtgttgaag ttcgtcaagc agacggttct tactggaacc
     3061 tctctggtaa ccaaatcggt gctatcattg ctaagtacat ccttgaagcc cacaagcaag
     3121 caggcacact tcctgcaaat gctgcccttg ctaagtcaat cgtttcaact gagttggtaa
     3181 ctaagattgc tgaaagctac ggtgctacca tgttcaacgt cttgactggt ttcaaattca
     3241 tcgctgagaa aatccaagag ttcgaagaaa aacacaacca cacttacatg tttggttttg
     3301 aagaaagctt tggttacttg attaaaccat tcgtacgtga caaggatgct atccaggctg
     3361 tgcttatggt tgctgaaatt gctgcctact accgttcacg tggcatgacc ttggctgacg
     3421 gtatcgatga aatcttcaaa gaatacggct actttgctga gaaaacaatc tctgttaccc
     3481 tttctggtaa agacggtgca gagcaaatca aggcaatcat ggctaaattc cgcgataact
     3541 caccagcaca attcaacgca actgacatcg cattctttga agactttgcc cttcaaacta
     3601 agacagacaa agatggaaac gttgaaaaac tcactactcc tccatcagat gtcttgaaat
     3661 acaccttggc agatgattct tggtttgccg ttcgtccgtc aggaacagaa ccaaaaatca
     3721 aattctacat cgcaacggtt ggtgaaaccc tcgctgaagc ggaagaaaaa attgccaata
     3781 tcgaaaaaga aatcaacgag tttgttggat aatcattgaa aaccaaaaag agtcgctatt
     3841 gcggctcttt tttgcttcta atctatcgtt tgtatctatt aatttgagaa ccacattcac
     3901 taaagccgtt ccaatcccgt accggctata ttccctatct acatataacc atgctagttc
     3961 atcatctgta aatgcaacaa atccgaccac aaatctttcc atctctgcca caagaatctg
     4021 gtaatcaaac aatccttccc tatcagcagc aatactaagc ggaataaatg cttctgataa
     4081 gttagctaaa tccaattctt cttgacgtgc agggtcatga atttggcaaa gcctttcaaa
     4141 gtcttcttga agatactgtc taatataaat ctcttttgac attattcatc cttccttaca
     4201 aatttgtcca tgacataaac aattctactt cctgagtatc ttcatctatg ttctctgaaa
     4261 taatcgaaaa tccttctctc aggtaaaatg aaattacttt ttggtttttt tgatatacat
     4321 ttaactgaag cgttggatga attgctttta caaaattaag caactcccta ccaaaaccat
     4381 tactacgcaa atctttagaa acaaaaattc ctgctagata tgttccttgc attccaatca
     4441 atccaacaat tctttcttca ataacataaa cataaatctc tgcatctaat agctgagata
     4501 ttacaaagtc aatttttgat tcccaatact cagctggaat aaatgcatgg gtctcaacat
     4561 tgccagtcaa ccaaagttga acaattgttt caatatcttc attttgaaat tttctaatca
     4621 tacctttacc atccaatctg ttccattcta ttaataataa atagtttttg caagcagtaa
     4681 cattaatttt gcacattaat taacatattc taaaaatttt aggtggataa atggaaatag
     4741 aaactaataa tttctagcta tcacttctac ccactccaaa aaattcctca ctctgatact
     4801 ttccaccaca aagcaaaaag ccttacaacc aagtcttttc attatccctt cgttcaaagg
     4861 tttctagact tttacgagca gtgcaacaca ctcagcggtt cgctgttacc gcatcactat
     4921 gttctgcgac agctatcgca tgggcggaag taaatgctac tcttcgttgt ttcacgcctt
     4981 gactagcaaa cttaccgcct caacatgtgg tgataggtct taccaatatt atggaacgaa
     5041 acggaaaggt ttaaggctag gattaaatta tggaactaaa tttataacaa aactgtctaa
     5101 tagctgtgat aattcaaata tccaggagcc ttttggtagc tttattaaat tcattaaata
     5161 gctttatcat aattttatct ataactatca atatgtagaa ccaaataaaa tagttagaat
     5221 ccccaaattc tttattttct aattctagta acgtaggcaa attacgttga tatgatagtg
     5281 tattatgagc caatcgattt ctatgtcggt ataacttatc gtatgctttc tgcccttcac
     5341 tctccaataa attgtaacct gttccctttc tagcaatgca cttatatcca attttattct
     5401 ttatattacc cttgaattct ataaaagcat taccattcca atattggata ttactttcat
     5461 cgaaaatttt acatacaata tctttagctt cctcgactat tacctttctg tcagattcag
     5521 aaaattcatc cctatccagt agaatcatta atttctgata tatggatttc ttagagtcat
     5581 atgtcgaaaa accttgtgtg gcataatctc ttaaaaaatc tcttctgaac tcaaaatcct
     5641 cagtagccat ttcccaaaca atacatttaa atttttgttc ttgaaaacct gtcatttgta
     5701 aaaaaattgt ctttagcaag tactcattta aaggataagt ttcgattcct gtatttatag
     5761 aactaattgc agaaagtgct tccatcatta cagattcaat aggactgtta ataaaatctt
     5821 catgtttggt catagcccat actccctata aatttcaatt gatttctcaa ctctctcacg
     5881 taaatatttc aatgcagatg ggttcttttg gtgatagctg ctatatactc cttttaaatg
     5941 atcatatgtt ggaataccct gtttatcaag atatggagct ttataatcag aaatttgttt
     6001 attcagtttc tctttaatac taggccagtt ttgtgaatca ataacctttt tttcaaatat
     6061 tattaaataa attaaaccaa agtaatacat atcacaatca ataatagact caaatgatgt
     6121 tttgcttaat cgtgaattac taattatatc ccacaaattt tgatagtatc ttgaatgagg
     6181 tagttcacca gagggtagct gttcattact ttcaaacaac tcctcgtaac taatataaat
     6241 ttcaattgtg ttatcatttt tatcaccaat tataaaattt atataatttt catagtactc
     6301 ctctagtttt tctttttttc caccaaaacc actacataaa ttttgggcac tattattttt
     6361 tttatattct gataaaattg ataaatatct tataaagtca atagataggt caccttcaat
     6421 tagtttgata aattcaggct taaagaaatc agttttacta tcatctaaat agtagagtgc
     6481 ctctctactt tcttgaccag tcaaagccat cccctgtcga ttaatatttc taaaaacgga
     6541 agaatagtat ctttgctgat cccctctttg agtattatta ggtactagat acgagaatcc
     6601 taaaaaagta ttcttcaaaa aatgtctgtc aatttcatca tcattattca acgctttgaa
     6661 agatttatcc ttttctagat ttgattttat ttttgaaatc gttaaattat cttctttaag
     6721 taagtcatta aacgaccagt taattacatc tgtgaaggaa tcagtgtcac ctgcaaaatc
     6781 gtcattttca tcaatgtatt ttctgacttt attttttgta tgcattttat aggtttcgcg
     6841 atctggaaaa aatcctaaca ctgacaataa aatgcttgtt agtctttgtt gtccatcaat
     6901 tagaagattt tctttcacac catttttagt aaatgaacca atagttacag gtggaacaaa
     6961 ttccttattt ttaagtgaag caattaattt ctttcttttt gcctcgtccc acgaaaaatt
     7021 tctttgatat tcgggtagaa taatattttt agaaagaatc aattcaatcc aatagtccaa
     7081 agagtactct ccataatata ctttattctc cataacatta catcctctta tttttcaatc
     7141 acctaatggt gtctatttag ttgttattat accacgaaac aacaaaaaaa ctgcaacctt
     7201 tcggccacag tcacttacaa atctacctca gtcccctcta agaattttac acttatctgc
     7261 ccatcttctg aaattgtaat actgtccaat acctgacaca tctcatacga atcgaattcc
     7321 caggatggct tgtttatcac ttcagccaac tttgtactat aatgcttttc tagcggacga
     7381 ttttcttcta gaatcttatt ccacttccca tgcaacagat ccacgttctc actcaatagt
     7441 tctacagcca ttactacggc tttctctaac gtttcttcat caatatggtt attctgacag
     7501 ccaatctgtc ctttgaccct atatcgattg ttacattgcc aaaccttgcg tttacctcga
     7561 ctggtggtcc agttctttcg accaaaggct gaaccacatt ctttacagaa caccttagtt
     7621 gtaaaagggt tatcgtcatt ttgcatgata taggacttga gctgatgctc ctctcggtag
     7681 gctttcctcc ttgccaattc caactgtact aattcccaag tgtctttgtc aataatagct
     7741 tcatggctat tttctacata gtattggtta acttgaccat cattggcaat ccgtttctta
     7801 gtcaaaaaat caactgtaaa agtcttttgt aataaggcat cacccttata cttttcattt
     7861 tgaagcattt tctgtattgc gcttggatac caatttgcct ttcccgtcca accaggtatt
     7921 tcattgtcat tcaaatactt agcaatggat tcaggactat acccctctaa gaatttctcg
     7981 tatatgtatt ttacagtttc agcttgccga gggttaatga taagcctacc attctcatcc
     8041 ttgtcataac ccatgaactt tgtggtattc acccgaactt ccccacgttc aaacttctta
     8101 cgaattcccc acgtcgcatt ctctgaaatg gaacgtgact catcctgtgc caaggaagaa
     8161 aggattgtaa gaagaacctc acctttagaa tctagactgt caatattctc cttctcaaaa
     8221 gtcaccccca ccccaagttc tttcagctct ctgacgtact tgatacaatc aagggtgttt
     8281 ctggcaaatc gactgatcga cttgaccaaa atcctatcca ccttaccagc cctgcaatct
     8341 tgtatcaacc ggttaaaagc atcacgtttt ttggtattgg ttgctgagat gccctcatcc
     8401 gcatagatgt caactaactc atagtcctcg tgtttagaga taaactctcg gtaataatta
     8461 acttggtttt cataacttga tagctgttct tcttggtcgg tggacactcg acaatatgcg
     8521 gctactttga ttttcttcct gacctgatgt tgaacactgg tctgcacttt cttggccgga
     8581 ataactgtaa tacttttccc catttctatc cctttctatt actgtaacag ttgaggttat
     8641 ctcccaattt gaaatatcta cttctggcac tcgcataccc tgacaagttg cttttccctc
     8701 ttttatgtat ttggaacagc accaaacaat ttttttcttg taagaaactt gtctctttaa
     8761 agtcgaacca caatgctgac actttaataa ccccgtaaat ttataggttt tgtttctacc
     8821 ttgttgccat cttctactga ttagtttgtc ctggactgct tgccaatctt ccatagaaat
     8881 aatagcttca tgattatcct ctataaagta ttgttcgagt tcaccctgat tcaatttttt
     8941 aggaccattc acaccatcgt gaaaatactt ctgcaataag actgaaccat tgtacttttc
     9001 attgcttaac atttgacgga ttgtggtgtc atgccattta gcacctgtaa cagtcgcaac
     9061 gcccttttca tttaacagct tggcaatacg atgagtacca tacccttcaa ggtaaagtgc
     9121 aaatatttgc ctgactatca aagcttcttc tggattgata atcaactcac cattctcgtc
     9181 taaatcgtat cctaagaatc gcttggtgtt aatgactagc tcacctcgtt ggaacttctt
     9241 ttgaaatgcc caacgttgat tgccactcat actcctcaac tcgtcctcag caatactagc
     9301 taatactgaa agcatcactt ccccttcact agaaagggta tgaatgtttt gttcctcaaa
     9361 gaaaatgtct actcctattg ccttcagttc acgactaatt tcaagaactg taaccgtgtt
     9421 tctagcaaat cgagcaattg acttggtatg aataatatca atcatacctt tacgacaatc
     9481 ttcaatcatg gcttgaaaat ttggacgatt atccttagaa ccagatatac ctctgtcatg
     9541 ataaacacct acaaaatcaa tatcgtctct attggaatac aggttttcaa aatactgttt
     9601 ctgattttct aacgattcta actgacttcc attagtcgtc gaaactcgaa tgtaggcaca
     9661 gaccctcttc ctatgttttt gtctattgac tctaatcttc tttacggaca tttactctcc
     9721 ttcctatgta atggcacact atatatcact ctaaagggaa tattagtcaa gttatcagac
     9781 caactatttc gacctgataa atttatgcca cagttcatgg aatacaaata ttcctcctac
     9841 cttactaggt aggttttgga gtaatttttc cgcacttatt gaaaaaaaaa agac
//
LOCUS       DASFQS010000079         9871 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.081, whole genome shotgun sequence.
ACCESSION   DASFQS010000079 DASFQS010000000
VERSION     DASFQS010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9871
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.081"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            275..1258
                     /gene="guaC"
                     /locus_tag="U1041_001706"
     CDS             275..1258
                     /gene="guaC"
                     /locus_tag="U1041_001706"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HEM4768800.1"
                     /translation="MFNETPVFDYEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV
                     PANMQTIIDEDVAEMLAKDGYFYIMHRFDEEGRIPFVKRMHDQGLIASISVGVKEYEY
                     EFVTSLKADAPEFITIDIAHGHAESVIKMIQHIKKELPETFVIAGNVGTPEAVRELEN
                     AGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIA
                     KSIRFGASMVMIGSLFAGHIESPGKTIEVDGEKFKEYYGSASEYQKGAYKNVEGKKIL
                     LPAKGHLKDTLIEMEQDLQSSISYAGGRDITSLKHVDYVIVKNSIWNGDSI"
     gene            1328..2677
                     /locus_tag="U1041_001707"
     CDS             1328..2677
                     /locus_tag="U1041_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4768801.1"
                     /translation="MYQTRNNKEKLWLFIKIFLPILIYQFANYSASFIDTMMTGQYST
                     MDLAGVSMATSLWNPLFSFLTGIVSALVPIIAQYLGKGERDKIREEFHQFIYLAIGLT
                     ILLLCSVLFIAVPALAQFGLDESVFQVGRQYLYFISIGILPLLLFSVCRSFFDALGLT
                     QLSMYLMLLLVPFNSLFNYLLIYGKMGLPALGGAGAGLGTALAYWAVLLVIVIVMCKN
                     KTIASYQIWQWSPIDLSLLKEGLKIGLPIGLQVFAEVAIFAVVGLYMAKFSAQIIAAH
                     QSAMNFATLLYAFPASVSSALAIVIAYEVGAKRPQDVKAYSRLGRLVALGFAGLTLTF
                     LYFFRSKVAYLYGNDAEFIGLTSHFLSFALMFQLADAFTAPIQGILRGYKDTTVPFIL
                     GLVAYWSMTFPVAFLLERFIQMGPEAYWIGLISGIFVCGIALNLRLIKIAHSHLSVK"
     gene            2775..3293
                     /gene="rimM"
                     /locus_tag="U1041_001708"
     CDS             2775..3293
                     /gene="rimM"
                     /locus_tag="U1041_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEM4768802.1"
                     /translation="MNYFNVGKIVNTQGLQGEMRVLSVTDFAEERFKKGAKLALFDDK
                     DQFVMEVEIASHRKAKNFDIIKFKGMYHINDIEKYKGFSLKIAEENLTDLEDGEFYYH
                     EIIGLDVYENDILIGQIKEILQPGANDVWVVKRKGKKDLLLPYIPPVVLNIDIPNNRV
                     DVELLEGLDDEN"
     gene            3283..4008
                     /gene="trmD"
                     /locus_tag="U1041_001709"
     CDS             3283..4008
                     /gene="trmD"
                     /locus_tag="U1041_001709"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEM4768803.1"
                     /translation="MRIDILTLFPEMFAPLEHSIVGKARDKGLLEINYHNFRENAEKA
                     RHVDDEPYGGGQGMLLRAQPIFDTMDSIEQTKPRVILLDPAGRTFNQAYAEELAQEEQ
                     LIFICGHYEGYDERIKTLVTDEISLGDYVLTGGELAAMTMIDATVRLIPEVIGKEVSH
                     TDDSFSSGLLEYPQYTRPYEYRGMVVPDVLMSGHHENIRKWRLEESLRKTYQRRPDLL
                     ENYNFTAEELTIFEKIKAEDTVD"
     gene            4039..5106
                     /locus_tag="U1041_001710"
     CDS             4039..5106
                     /locus_tag="U1041_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HEM4768804.1"
                     /translation="MKRKVFEHYQPYKIKQKARFDLGNNENRIIDWAFLPQETLENLD
                     VNQLSFYGDNTYSELIEKYATYLGVNPKQVTVGVGSDHLIHMIVSTFMEKDDTFLTVT
                     PDFFMYETYNHMHGSRFETIDLEAKNDTLVLPVEKLLARAEEVKAKIIMLSNPNNPSS
                     VAYSLEDLEKLAISFKGLLVVDEAYIEFAVVESFISRLQQFDNVLVLRTLSKAFGLAG
                     LRVGFAVGSEELIYELDKVIPLFSLSNLTAKMAAVALNYTDKVLETVGVIQNLREEMI
                     LFLQGLDNCQVLPSQASFVTFKAPWAEEFHRQALAQDWNFKYYPTGKLKGYIRLSIGR
                     PEEMAMLKEMVKSMIEKGAIS"
     gene            5220..5969
                     /locus_tag="U1041_001711"
     CDS             5220..5969
                     /locus_tag="U1041_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM4768805.1"
                     /translation="MDILKSERKQVILELIQAQQFIRLEELVDILATSESTVRRDLDE
                     LENEGKLRRVHGGAEAPANLQLEESILEKSVKNVQEKRMIAERAAQLIMDGDVIFVDA
                     GTTTGVLIDYLQQDNLTVVTNSIHHAVKLVERKIKTIIIGGYVKQSTDASVGAMALEQ
                     IRQLNFDKAFLGMNGIDKNYFTTPDIEEATIKRTIIDNAKESYVLADASKIGQFSFVK
                     VAAIEKSNIICQSSESSLLDIIKEKTRVIEV"
     gene            5966..6877
                     /gene="pfkB"
                     /locus_tag="U1041_001712"
     CDS             5966..6877
                     /gene="pfkB"
                     /locus_tag="U1041_001712"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019323947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HEM4768806.1"
                     /translation="MIYTVTLNPAIDYIVRLEHVETGSVNRMESDDKYAGGKGINVSR
                     VLKRLGYPNTATGFLGGFTGQFIKDGLIAEGIDTDFVQVDQDTRINVKIKADQETEIN
                     GLGPIVTDTQLAELEMVLAGLTKEDTVVFAGSAPASLGNEVYNRLIPMAKKTGAQVVC
                     DFEGQTLLDSLAHQPLLVKPNNHELEAIFNVELNGIADIETYAKKILDMGAQNVIISM
                     AGDGALLVTPAATYFAKPIKGTVKNSVGAGDSMVAGFTGEYVRSQDPIEALKWGVACG
                     TATAFSDDLASIEFIKETYEKVEVETL"
     gene            6874..8829
                     /locus_tag="U1041_001713"
     CDS             6874..8829
                     /locus_tag="U1041_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4768807.1"
                     /translation="MKIQDVLRKDVMLLDLQATSKEAVIDEMITSLVDKGYVTDFDVF
                     KTGIMNREAQTTTGLGDGIAMPHAKNTAVKEATVLFAKSNKGVDYASLDGQPTDLFFM
                     IAAPEGANDTHLAALAELSKYLMKPGFADRLRAASNPEEVIAVFDTAEATDKAVEEVV
                     ASPSGDRPFIVAVTACTTGIAHTYMAEEALKKQAAEMGVDIKVETNGASGVGNKLTAE
                     DIKNAAGVIIAADKAVDMPRFNGKPLVSRPVAAGIKQAEELINIILDGKASAYTASEG
                     AATMESSEKLSLGKAFYKHLMSGVSQMLPFVIGGGILIALAFLFDNLLGVPSDSLGSL
                     GSYNEIAAMFMKIGGAAFGFMLPLLAGYIAYSIAEKPGLVAGFVAGAIASSGLAFGKI
                     PYAAGGEATQALAGVSSGFLGALVGGFLAGGVVLVLRNALRNMPKSLQGLNAILLLPL
                     LGTAITGFLMFFVNIPMAAINTGMNNFLAGLEGSSAILLGLVLGGMMAVDMGGPVNKA
                     AYVFGTGTLAATVADGGSVAMAAVMAGGMVPPLAVFVATLLYKNKFTQEERNSGLTNI
                     VMGLSFITEGAIPFGAADPARAIPSFIAGSALAGALVGLSGIQLMAPHGGIFVIALTS
                     NPLLYLAYVAIGAVVSGVLYGVLRKAK"
     gene            9021..>9871
                     /locus_tag="U1041_001714"
     CDS             9021..>9871
                     /locus_tag="U1041_001714"
                     /inference="COORDINATES: protein
                     motif:HMM:TIGR01167.1,HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4768808.1"
                     /translation="MFWKEKQNKFSIRKFNRGVASVIIGMTAALFFVPNLAIKAELTA
                     LAHTNVAREQISYKYVLYSELTSDEKARIQATIPARQVGDTHTYYMVYRPKTNLPQTG
                     DIPTFTSSLVGLGLLIIGLSLTKDRKKRIVRSLIILTATGSLSVAAISTGSLSGFDKQ
                     FTLSIGEALPQAVISIDQHEFVGYILEGHVNSEAITVSEAIIDEQGSSSELILPNILV
                     EGISKHSEAPIVDDIIPEEPTVPVAPSSPVTEQPVAPVPPATEAEVLPEEPTEPVVPS
                     SPVTDEP"
BASE COUNT         2896 a         1831 c         2212 g         2932 t
ORIGIN      
        1 gtttttgaag attttttagt ttttatgtaa aattgtttga gtaaattctg aacatttttt
       61 taaattttat aagaatagta actcagaaaa gaattatacg aatgttatat tttataaaaa
      121 agcctaaaaa gtgatatatc cgaatattgt ctagatgggt ttctttttta ttgacaaaac
      181 acaaacgata agctatacta tatcttgtaa taaggaaaaa atacgaaaaa caaaccgttt
      241 ttctgttcca atgttaagaa aaagaggtag aagcatgttc aacgaaactc cagtttttga
      301 ctacgaagat attcagctca ttccaaataa atgtatcatc aatagccgtt ccgaggcaga
      361 tacaacagtg actcttggga aatatagctt taaattacca gttgttccag ctaatatgca
      421 gactattatt gatgaagatg tagcagagat gttggcaaaa gatggctatt tttacatcat
      481 gcaccgtttt gatgaagagg gacgtattcc tttcgtgaag cgcatgcatg accaaggctt
      541 gattgcttct atctcggttg gcgtaaaaga atatgaatat gagtttgtga ctagtttgaa
      601 agctgatgcc cctgagttta tcaccattga tattgctcat ggccatgcag aaagtgttat
      661 caagatgatc caacatatca agaaagaact gcctgagacg ttcgtcattg caggtaatgt
      721 cggtactcca gaagcagttc gtgaactaga aaatgctggt gcggatgcga caaaagttgg
      781 tattggtcca ggtaaagtat gtattacaaa ggttaagact ggttttggta caggtggttg
      841 gcagctggct gcccttcgtt ggtgcgcaaa agctgcccgt aaaccaatta ttgcggacgg
      901 aggtatccgt acccacggag acattgccaa atccatccgc tttggcgcaa gcatggtcat
      961 gattggatcg ctctttgctg gtcatatcga aagcccaggt aaaacaattg aagttgatgg
     1021 tgagaaattc aaagagtact acggctctgc atctgaatat caaaaaggtg cttataagaa
     1081 cgtggaaggt aagaagattc tcctgccagc caaaggtcac ttgaaagata cgctgattga
     1141 aatggagcaa gatttgcagt catctatttc ttatgcagga ggacgtgaca ttaccagctt
     1201 gaagcatgtg gactatgtta tcgtgaaaaa ctctatctgg aatggtgact ctatctagtc
     1261 aaagaggact tgcaaagcag gtccttttct tgttacaata tttatataaa attgaaagag
     1321 aataagtatg taccaaacaa gaaataacaa agagaagctc tggctattta tcaaaatatt
     1381 tttgcctatt ttaatttatc aatttgctaa ttactccgca tcctttatcg ataccatgat
     1441 gactggtcag tatagtacta tggatttggc aggtgtttcc atggcaacaa gtctttggaa
     1501 tccgcttttt tcatttctaa cagggattgt atctgcattg gtcccaatca tcgctcaata
     1561 tttaggaaaa ggtgaaagag ataagattcg tgaggagttt catcagttta tctatctagc
     1621 catcggacta accattttac tcttgtgctc ggtcctattt atcgctgttc ccgccttggc
     1681 tcagtttgga cttgatgaat ctgtttttca agttggtcgg cagtacctct attttatttc
     1741 cattggtatc ctgcctctct tgctctttag tgtctgtcgc tcttttttcg acgccctcgg
     1801 cttgactcag ctatccatgt acctcatgtt gctccttgtc ccatttaaca gtctatttaa
     1861 ctatctcttg atttatggga aaatgggcct accggcccta ggcggagcag gtgctggatt
     1921 gggcactgct ttagcttact gggcggtatt gctagtaatc gtcattgtca tgtgcaaaaa
     1981 taagactatt gcatcttatc agatttggca gtggagtccg attgaccttt ctttattgaa
     2041 ggaaggcttg aaaattggtt tgccgattgg tttacaagtc tttgcagaag tagcaatttt
     2101 tgcagtagta gggctctaca tggcaaaatt ttcagcccag attatagcag cccaccagtc
     2161 agctatgaac tttgcaacct tattatatgc ctttcctgcc tcagtttctt cagccctagc
     2221 tattgtcatt gcttatgaag taggggctaa acgaccacaa gatgtgaaag cctacagccg
     2281 tctagggcgc ttggtggcac ttggttttgc aggcctaaca ctcactttcc tatatttttt
     2341 ccgctccaaa gttgcctacc tttatggtaa tgacgcagaa tttatcggtc tgacctcgca
     2401 ttttctaagc tttgccctca tgttccagtt agcagatgcc tttacagcac ctattcaggg
     2461 gattttacgt ggttacaagg atacgactgt tccatttata cttggtttgg ttgcctattg
     2521 gtccatgacc ttcccagtcg cattcttgct tgaaagattt atccaaatgg gtccagaagc
     2581 ctattggatc ggtcttattt cagggatttt tgtctgcgga atagctctta atttgcgctt
     2641 gatcaaaata gctcattctc atttatccgt gaaataaatt aactatgaaa gtcggaggca
     2701 tccggctttt tctctcttgt gaaaatatct tgctcatgtt aaaataaaag gatagaaaat
     2761 caaatggaga atttatgaat tattttaacg taggaaagat tgttaacacg caaggcctac
     2821 aaggggaaat gcgtgttttg tctgtgaccg attttgcaga agaacgtttt aaaaaagggg
     2881 caaagcttgc actttttgat gacaaggatc agtttgtcat ggaagtggaa attgctagtc
     2941 accgtaaggc taagaacttt gatattatca agtttaaggg catgtaccat atcaacgata
     3001 ttgaaaagta caagggcttt agtttgaaaa ttgccgagga aaatttgacc gaccttgaag
     3061 atggtgagtt ttattaccat gaaattatcg gcttggatgt ctatgagaat gatattctga
     3121 tcggacaaat caaggaaatc ttgcagccag gtgccaatga tgtctgggtg gtgaaacgaa
     3181 aaggtaagaa agacctgctc ttgccatata ttccacctgt tgtcttgaac attgatattc
     3241 caaataaccg tgtcgatgtg gaattactcg agggcctaga cgatgagaat tgatattttg
     3301 accctcttcc ctgagatgtt tgcacctcta gaacactcta ttgtgggtaa ggcgcgtgac
     3361 aaggggttgc tagaaatcaa ctaccacaat ttccgagaga atgctgaaaa ggctcgccat
     3421 gtggacgatg aaccctatgg tggaggacaa ggcatgttgc tccgtgccca gccaattttt
     3481 gatactatgg atagcattga acaaaccaag ccacgtgtta tcctattgga tcccgctggg
     3541 cgtactttca atcaggccta tgccgaagaa ttggcacagg aagagcagct gattttcatt
     3601 tgcggtcact atgaaggata tgatgagcgg attaagacct tggtaacaga tgagatttct
     3661 ctcggagatt atgtcctgac aggtggagag ttggcggcta tgaccatgat tgatgctacc
     3721 gttcgtctga tcccagaggt tattggcaag gaagtcagtc atacggatga tagtttttca
     3781 tcagggctat tggaatatcc tcaatacacc cgaccatacg agtatcgtgg aatggtagtt
     3841 ccagatgtat taatgagcgg tcaccatgaa aatattcgta aatggcgttt ggaagagagt
     3901 ctacgcaaaa cctatcaacg tcgtccagac ttgttagaaa actacaactt tacagctgaa
     3961 gagttaacta tttttgaaaa aatcaaagca gaagacacag ttgattagac tgtgtttttc
     4021 ttgctagaag gagaaatgat gaaacgcaag gtatttgaac attaccaacc ttataaaatc
     4081 aaacaaaagg caagatttga tttaggaaat aacgaaaatc gtatcattga ttgggctttt
     4141 ttgccacaag agaccttgga aaatttggat gtcaatcaat taagttttta tggtgataac
     4201 acttactccg aactgattga gaaatatgct acctatcttg gagtgaatcc caaacaagtg
     4261 acagtaggtg tgggctctga tcaccttatt cacatgattg tttccacctt tatggaaaag
     4321 gatgatactt ttttgactgt cactccagac ttcttcatgt atgaaaccta taatcacatg
     4381 catggtagcc gttttgaaac cattgatttg gaagcaaaaa acgatacact cgtcctacca
     4441 gtagagaaat tgttggcgcg tgcggaggag gtgaaggcaa agataatcat gctttccaat
     4501 cctaacaatc cttcctcagt agcttattca ctagaagatt tggagaaatt ggctatttct
     4561 tttaaagggc tactcgttgt agatgaggct tatattgaat ttgcagtagt cgaaagcttc
     4621 atcagtcgtc tgcaacaatt tgacaatgtt ttagttttac ggactttatc aaaggctttt
     4681 ggacttgcag gtttacgagt tggctttgcg gtaggaagtg aagagttaat ttatgaattg
     4741 gacaaggtca ttcccctgtt cagcttgtca aacttgactg caaaaatggc agccgttgca
     4801 ttgaattata cagacaaagt tttagaaaca gtgggagtaa ttcagaattt gcgagaagaa
     4861 atgattttat tcttgcaagg gttagataac tgtcaagttc tacctagtca ggctagtttt
     4921 gtaacgttta aagcaccgtg ggcagaagag tttcaccgac aagctttggc acaagattgg
     4981 aatttcaaat attatccaac aggtaaatta aaagggtata ttcgcctgtc tattggccgt
     5041 ccagaagaga tggctatgct taaagagatg gtcaaatcaa tgatagaaaa gggagcaatt
     5101 tcgtaagaga ttgttctttt ttgaagaaaa ttgacatttt ttgaaagaaa atgatagaaa
     5161 atgattgaca ttggcagaaa aacgtgtata atgatttttg taaacgattg caggaggtgt
     5221 tggacatact caaatcagaa cgcaagcaag tcatactaga actcattcaa gcacaacaat
     5281 ttatccgatt ggaagaattg gttgacattc tagcaacatc tgaatccact gttcgtaggg
     5341 atttggacga gttagaaaat gaagggaaac ttcgaagagt gcacggcggt gcggaagcac
     5401 ctgctaattt gcaactggaa gaatccattc tggaaaaatc tgtcaaaaac gttcaagaaa
     5461 aacggatgat tgctgaaaga gcagcacagt taatcatgga cggcgatgtg atttttgtag
     5521 acgcagggac gacaaccggt gtcttgattg actatctcca acaggataat ctaacagtcg
     5581 tgaccaattc cattcaccat gctgtcaagt tggttgaacg caagataaag accattatta
     5641 taggtggtta tgtcaagcaa tcaaccgatg cttcagtagg tgctatggct ttggaacaaa
     5701 ttcgacagct caattttgat aaggcatttc tggggatgaa tggtattgat aaaaactatt
     5761 ttacaacgcc agatattgag gaagcgacca tcaaacgcac tatcatagac aatgctaaag
     5821 aaagctatgt tttggcagat gcttctaaaa ttggtcaatt ctcctttgtt aaagttgcgg
     5881 caatcgaaaa atccaacatt atctgccaat cttcagaaag cagtttgttg gatatcataa
     5941 aagagaaaac gagggtaatc gaggtatgat ttatacagtt acgctcaatc cagcgattga
     6001 ctatatcgtt cgtttagaac atgtcgagac gggcagtgtc aatcgtatgg agagcgacga
     6061 taagtatgcc ggcggtaagg gaattaacgt tagccgtgtt ttgaagcgct tgggctatcc
     6121 gaatacagca acgggtttcc ttgggggatt cacaggtcag ttcatcaaag atggattgat
     6181 tgccgaagga attgatactg attttgttca ggttgatcaa gatacacgta ttaacgtgaa
     6241 aatcaaagct gaccaagaaa cagaaatcaa cggtttgggt ccgattgtga cagatacaca
     6301 gttggccgaa ttagaaatgg tcttagcagg attgaccaaa gaagacaccg ttgtctttgc
     6361 tgggtctgct ccagctagtc ttggaaatga agtctacaat aggctgattc ctatggcgaa
     6421 aaaaacagga gcgcaagtgg tctgtgactt tgaaggtcaa acacttctag actcactagc
     6481 acaccaacca ctattggtca agccaaacaa ccatgaactt gaagcaatct tcaatgtcga
     6541 attgaatggc attgcagata tcgagaccta tgctaagaaa atcttagaca tgggagctca
     6601 gaatgttatc atttctatgg caggggacgg agccttgttg gtcactccag cagctactta
     6661 ctttgctaaa ccaatcaagg gtacggtgaa aaactctgtc ggagctggag attccatggt
     6721 agcaggtttt acaggcgaat acgttcgctc acaagaccca atcgaagccc tcaaatgggg
     6781 agttgcttgc ggtacggcaa cagccttttc agatgatttg gcaagtatcg aatttattaa
     6841 ggaaacttat gaaaaagttg aggtagaaac actatgaaaa ttcaagacgt tttgagaaaa
     6901 gatgtcatgt tgcttgattt gcaagcgaca agcaaggaag cagttatcga tgaaatgatt
     6961 actagcttgg ttgacaaagg ttatgtaact gattttgatg tattcaaaac aggtattatg
     7021 aaccgtgaag cacaaactac tacaggtctt ggtgacggta tcgcaatgcc acatgctaag
     7081 aatacggctg taaaagaagc gactgttctc tttgctaaat caaataaggg tgtcgactat
     7141 gcaagtcttg atggtcaacc aactgatttg ttcttcatga ttgcagctcc agaaggtgct
     7201 aacgataccc acttggctgc ccttgctgaa ttgtcaaaat atttgatgaa accaggtttt
     7261 gctgatagac ttcgtgcggc atcaaatcct gaagaagtga ttgcagtctt cgatacagct
     7321 gaagccacag ataaggcagt tgaagaagtg gttgcatcac caagtggtga ccgtccattt
     7381 atcgttgctg ttacagcatg tacaacaggt attgcccaca cttacatggc agaagaagct
     7441 ctcaagaaac aagctgctga aatgggtgtt gacatcaagg ttgaaaccaa cggtgcttca
     7501 ggtgttggaa acaaactaac ggctgaagac attaagaatg cggcaggtgt aatcatcgca
     7561 gcagataagg ctgttgatat gcctcgtttc aatggtaagc cattggtatc tcgtccagtt
     7621 gctgctggta tcaaacaagc agaagaattg attaacatca tcttggatgg taaagcatca
     7681 gcctacacag cgtcagaagg agcagctact atggaatctt cagaaaaact cagtcttggt
     7741 aaagcgttct ataaacactt gatgagcggt gtttctcaaa tgttaccatt cgttattggt
     7801 ggcggtatct tgattgccct tgccttctta tttgataact tgcttggtgt accaagtgac
     7861 agtcttggta gcctgggttc atacaacgaa atcgcagcta tgttcatgaa gattggtgga
     7921 gcagcctttg gttttatgtt gccacttctt gcagggtaca ttgcttactc aatcgctgaa
     7981 aaaccaggtt tggttgcagg tttcgtagct ggtgcaatcg ctagcagcgg tcttgctttc
     8041 ggtaaaattc cttacgcagc tggtggtgaa gcgactcaag cactagcagg tgtatcatct
     8101 ggtttcttgg gtgcccttgt tggtggtttc cttgctggtg gtgtagtgct tgttcttcgc
     8161 aacgctttgc gtaacatgcc aaaatcactc caaggtttga atgcaatctt gctcttgcca
     8221 cttttgggta cagctatcac tggtttcttg atgttctttg tcaacatccc aatggcagca
     8281 atcaacacag gtatgaacaa cttccttgca ggtcttgaag gtagctctgc tattctcctc
     8341 ggccttgtcc tcggtggaat gatggcagtc gatatgggtg gtccagttaa caaggcagcc
     8401 tatgtcttcg gtacaggtac gcttgcagct actgttgcag acggtggttc tgtagcgatg
     8461 gcggcagtta tggcaggtgg tatggttcca ccgttggcag tattcgttgc aacccttctt
     8521 tacaaaaata aattcacgca agaagagcgt aactcaggtt tgacaaacat tgttatgggt
     8581 ctttcattca tcactgaagg tgcgattcca tttggtgctg ctgacccagc tcgtgcaatc
     8641 ccaagcttta tcgcaggttc tgctcttgca ggtgccttgg taggtttgtc aggtatccaa
     8701 ttgatggctc cacacggtgg tatcttcgtt atcgctttga cttctaaccc tctactttac
     8761 cttgcttatg tagcaattgg tgcagtagta tcaggtgttc tttacggcgt acttcgtaaa
     8821 gctaaataag attgtaaacc ttgtcatttg acgaggtttt ttcatctgga aaatgctata
     8881 attagatcaa gatataaata attatgtaaa taataccaaa tatagtatat tgagccatat
     8941 tttgtttgct ttaaaacagt atattattag aaaaatatgc tatactttta agtaagaaga
     9001 aacaaacgaa ggagcttcat atgttttgga aggaaaagca aaataagttt tctattcgca
     9061 aatttaatag aggcgttgca tcagttatta ttggtatgac tgccgcctta ttttttgtac
     9121 caaatttggc tattaaagca gaattgacag ctcttgccca tacaaatgta gcaagagaac
     9181 agatatccta taagtatgtc ctttattcgg aactgacatc agatgagaag gcacgaattc
     9241 aagcgaccat tccagcaagg caggttgggg atacccatac ttactatatg gtctatcggc
     9301 caaagacaaa tttgcctcaa acaggagata taccgacttt tacaagtagt ctggttggtt
     9361 tagggctatt gattatcggt ctatctctta caaaagatag gaaaaaacga attgttagaa
     9421 gtctgattat tttaactgct acaggtagtc tttcagtggc tgcaatttct acaggtagcc
     9481 tctcaggttt tgataaacaa tttacccttt ccataggtga agctttgcca caagcagtga
     9541 tttctataga tcaacatgaa tttgtaggtt atattttaga agggcatgtt aattctgaag
     9601 caatcacagt tagcgaagca attattgatg agcaagggtc atcgagcgaa ttgatattgc
     9661 caaatatatt ggttgaggga atatctaagc attcagaagc tcccattgtt gatgatatta
     9721 ttcctgagga accaacagtg cctgttgccc caagttctcc agttacggaa caaccagtag
     9781 cccccgttcc accagctaca gaagccgaag ttctacccga ggaaccaaca gaaccagttg
     9841 tcccaagttc tccagttacg gacgagccag a
//
LOCUS       DASFQS010000080         9650 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.082, whole genome shotgun sequence.
ACCESSION   DASFQS010000080 DASFQS010000000
VERSION     DASFQS010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9650
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.082"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(413..1414)
                     /gene="lacD"
                     /locus_tag="U1041_001715"
     CDS             complement(413..1414)
                     /gene="lacD"
                     /locus_tag="U1041_001715"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HEM4768809.1"
                     /translation="MTKLQLSQAKFNHMTRLSNSDQVIAALAIDQRGALKRLLAAAAG
                     GGEFGDDILIDFKKVISSDLTPYASSILLDAEYGVPASELRHADCGFIAAYEKTGYDA
                     STPGRLPDLLPNWSAKRIKELGADAVKILLYYDVDDKPEINDIKHAWVERIGSECIAE
                     DIPYFVEILTYDASDMDVTSREYAALKPHKVNGAMREFSKSRYNADVLKVEVPVNMNF
                     VEGYTDEEPVYTVEEAKAFFKEQTDSTHLPFIYLSAGVSAKLFQETLVFAKEAGSSFN
                     GVLCGRATWKDAVAIFASEGEEAAKAWLADQGRRNVEELNEVLATTARPWTEKVEVK"
     gene            complement(1438..2583)
                     /gene="nagA"
                     /locus_tag="U1041_001716"
     CDS             complement(1438..2583)
                     /gene="nagA"
                     /locus_tag="U1041_001716"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEM4768810.1"
                     /translation="MTVFIKAKSIILPESEVESAYLEITDKGQFGRIVTEKPEGEIVD
                     YSDFHLAPGLVDTHIHGYASHDVMDNDFEGIKVISEGLLSCGVTSWLPTTLTDTTENL
                     DAVCETIGTYAGQETGAKIQGIFLEGPFFTEKYKGAQNPKYMSDPSIEKLDNWHSLSK
                     GLVNKIAIAPEREGVKEFIEFANSKAIHTALAHSDATYAQAEAAVEAGANIFVHVYNG
                     MSGLHHREPGMVGAALNLKNVYAEMICDGHHVHPAAAEIVVKARGAEETVLITDCMRA
                     GGMGEGESRLGEFEVVVKDGTARLKESGSLAGSILELIEAVQNVVKWGLVPLPDALRM
                     ASLAPARSVNIDHICGRIAEGRAADFIVVDDAGCLQATYLDGVKRFG"
     gene            complement(2845..3183)
                     /locus_tag="U1041_001717"
     CDS             complement(2845..3183)
                     /locus_tag="U1041_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HEM4768811.1"
                     /translation="MSTNIYDIANELERAIRNLPEYKAVEAVKVSVEGNSEAKEILES
                     YISFQKEIQSKLQAGEIPTEADQKKMLDFNKKVQGNPLLTEYFSKQQQLGTYVADLER
                     IIFKPLNELL"
     gene            complement(3193..4296)
                     /locus_tag="U1041_001718"
     CDS             complement(3193..4296)
                     /locus_tag="U1041_001718"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEM4768812.1"
                     /translation="MKKTILIVGLGLIGSSLALCIRKDHPDYHLIGFDSNEQSCQIAL
                     GKGMVDEVSTELEGVAKQADVILLCVPIQVSLRLIEEFSALELKDTVLITDAGSTKSA
                     IVAVAEEHLAPRQINFIGGHPMAGSHKSGASAADLHLFENAYYIMTPCQATKQDAVPR
                     LTDLLSGTGARFVQIDAAEHDRVTSQISHFPHVLASSLMHQAGEYAQDHPFTNNFAAG
                     GFRDMTRIAESEPSMWTSILLTNADSILNRIEEFQARLSEISDVLRSGDQKAIWDFFD
                     KGRQTRKAMEIHKRAGVDSFYDLFLSVPDEEDTILKVLEVLRGISIVNIRINEENRED
                     IHGILQITFKNKGNLEDAAKRLREQTTYKIHLD"
     gene            complement(4304..5470)
                     /gene="aroC"
                     /locus_tag="U1041_001719"
     CDS             complement(4304..5470)
                     /gene="aroC"
                     /locus_tag="U1041_001719"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002997861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEM4768813.1"
                     /translation="MRYLTAGESHGPRLTAIIEGVPAGLPLTAEDINEDLKRRQGGYG
                     RGSRMQIETDRVEITAGVRHGKTTGAPITLNVTNKDHQKWLDIMAVEDIEEKLKNKRR
                     IKHPRPGHADLVGGMKYRFDDLRNSLERSSARETTMRVAVGAVAKRILAELDIEIANH
                     VVVFGGKEIDVPDGLSVAEIKERAAQSEVSIVNQEREEEIKAYIDQIKRDGDTIGGVI
                     ETVVGGVPAGLGSYVQWDKKLDAKLAQAVVSINAFKGVEFGVGFQAGYLKGSQVMDEI
                     LWSQEKGYTRRTNNLGGFEGGMTNGEALIIRGVMKPIPTLYKPLMSVDIDTHEPYKAT
                     VERSDPTALPAAGVVMESVVATTLATEILEKFSSDNMEELKAAVASHRDYVKNF"
     gene            complement(5473..6147)
                     /locus_tag="U1041_001720"
     CDS             complement(5473..6147)
                     /locus_tag="U1041_001720"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEM4768814.1"
                     /translation="MKIVVPIMPRNLEDVEAIDVERLAEADIVEWRADYLPKDDILRV
                     APAIFEKCNGKEVVFTIRTTREGGHLDLDDQEYVNLIKEVAALYQPDYIDFEYYSYKS
                     VFEQMLEFPNLVLSYHNFEETPSNYMEIMSELTSLSPAVVKMAVMAKTEQDVLDVMNY
                     TRGFKSLNTEQTFATIAMGELGKLTRIAGVITGSCWTFASLDETSAPGQMSLGNTRKF
                     LEILEN"
     gene            complement(6144..7307)
                     /locus_tag="U1041_001721"
     CDS             complement(6144..7307)
                     /locus_tag="U1041_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEM4768815.1"
                     /translation="MKIKVNRIAEQKINRGIQLLDSADFSGFSFDEDRLAVLYSESGS
                     YLGQAYLSKQNKGIGWLFSRSNQDLTMDFFVKLFVDAKQKRQHFYQSEMTNAFRLFNQ
                     DGDSFGGMTVDLYDEYAVFSWYNTFIYSVKEMIVAAFQQVFPEVRGAYEKIRFKGLAF
                     ESAHLYGEEAPEYFTVLENGVHYQVFMNDGLMTGIFLDQHEVRGSLVDGLVAGKSLLN
                     MFSYTAAFSIAAAMGGAGETTSVDLAKRSRELSKAHFKVNSLDLDNHHFVVMDVFEYF
                     KYAKRKGLTYDVIVLDPPSFARNKKQTFSVAKDYHKLISQSLEILNTGGTIIASTNAA
                     NVSVEKFKRQIEKGFGVRKHHYEASYRLPADFVINKNDESSNYLKVFTIQVDK"
     gene            7424..9598
                     /locus_tag="U1041_001722"
     CDS             7424..9598
                     /locus_tag="U1041_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEM4768816.1"
                     /translation="MKKLIDYVKKIGQTRLGFVLILLIIYWLKTLWAYYVDFNLDTQG
                     FFQNFIAIMNPLPVGILLLGLSLYIKNTKSFYSVTMTIYIVLFAWLFSNAVYYREFSD
                     YISISTMMATSSVSAGLGEAALKLFRLWDIVYFLDFIAFGFLVYRKAFHWDKTPFHKK
                     SSFAITAFSVLLFSINLFLAEIDRPELLTRGFSNTYIVRALGLPAFLGYNANQTYNAH
                     KDRSGATASDLEPVKQYITEHYAQPNDNYFGIAKGRNVIYLHLESLQQFVIDYKLNVN
                     GIEYEVTPFLNSLYHSSSTLAFSNFFNQVKAGKTSDAETMIETSLFGLNQGSFMVQYG
                     GSNTQQAAPYILSQNGGYTSAVFHGNAASFWNRNNTYKQWGYNYFFDQSYFSKATAEN
                     SFQYGLNDKIMFADSIQYLEHLQQPFYTKFITVSNHYPYTTSLIGDEIGFPLANTDDE
                     TINGYFATANYLDASIKAFFDYLKATGLYENSVIVLYGDHYGISNSRNPDLAPLIGKD
                     SQTWSDFDNAMMQRVPYMIVVPGMTNGGIFDTYGGEIDALPTLEHLLGIKSDNYLQVG
                     QDLLSSQHSQIVALRTAGSFITPKYTSYEGKIYYTETGLEITNPDETTQKEIDAIKEA
                     TAAQLATSDAIQTGDLIRFFDNGLPALDSSQYNYIDSLAAEIALENKLGTQSTSLYSK
                     NGNKSTIELFKAPSYLELHGSTTATSTPNTGTTSTSTSSTSQ"
BASE COUNT         2841 a         2249 c         1684 g         2876 t
ORIGIN      
        1 tagttattct caatttccac gaccggcgcg aaaacctaaa tccttaaacc tgtagtattt
       61 tagtttgctt ttagtagtag gcaacgagtc acaggcataa ctgatactct tcgaaaatcg
      121 aaagcagacg ttgttaactt gattggatga gtgaggccgg caaaaagccc agctccactt
      181 cttagagttc ttgtcaacat ctcagcgcct actacctgaa aatgcgaaag tatagtgatt
      241 tgaattagga aaaggacaac tttaagttat agtgtcaata acctactcct aaaataactt
      301 taaagttttc aaattgataa acttagatat gtcctgcttc atttcactat aaatgaatat
      361 atttgatggc acaaaaaaag tctgaaccta agcccagacc ttactaaaac aattatttta
      421 cttcaacttt ttcagtccaa ggacgcgctg tagttgctag aacctcgttt agttcttcta
      481 cgttgcggcg gccttgatct gccaaccaag ctttggctgc ttcttcaccc tcgcttgcaa
      541 agatggctac tgcatccttc caagtcgccc gaccacacag gacaccatta aagcttgaac
      601 cagcttcttt ggcaaagaca agggtttctt ggaagagttt ggcagataca cccgcgctca
      661 aataaatgaa tggcaagtga gtgctgtccg tttgttcctt gaagaaggcc ttagcttcct
      721 caactgtata aactggctct tcatctgtgt agccttctac aaagttcata ttgacaggca
      781 cttcaacctt gagcacgtcg gcattataac gtgacttact aaattcacgc atggcaccat
      841 tgaccttgtg tggtttgagg gctgcgtatt cacgagaagt cacatccata tcgctggcat
      901 cgtaagtcaa gatttcgacg aagtaaggaa tatcttctgc gatacactca ctaccaatgc
      961 gttctaccca agcatgctta atgtcgttga tttctggctt gtcatctaca tcatagtaaa
     1021 gcaagatttt tacggcatcc gcccccaatt ctttgatacg tttggctgac caatttggca
     1081 aaaggtctgg caaacgacct ggtgtggacg catcgtaacc tgttttttca taagctgcaa
     1141 tgaaaccgca atctgcatgg cgcaattctg aagctggaac accatattca gcatccaaaa
     1201 gaatggagct tgcataagga gtcaaatcgc ttgagatgac tttcttgaag tcaatcaaaa
     1261 tgtcatctcc aaattcgcca ccacctgctg cagcagcaag caggcgtttc aatgcaccac
     1321 gttggtcaat cgccaaggcc gcaatcacct gatcgctgtt tgacaagcgg gtcatgtgat
     1381 tgaatttagc ttgagaaagt tgtaattttg tcattagttt cctcctaagg aattttatta
     1441 accaaatcgt ttcacgccat ctagataggt cgcttgtaag catcctgcat catctacgac
     1501 gataaagtct gcagctcgac cttctgcaat ccgaccacaa atatggtcaa tattgacaga
     1561 gcgagctggt gccagagaag ccatacgaag ggcatcaggt aggggtacca agccccattt
     1621 cacaacattc tgcactgctt cgatcaattc taagatagaa cctgccaaac taccactttc
     1681 ttttaaacga gcagttccat cttttacaac aacttcaaat tcaccgaggc gggactcacc
     1741 ttcacccata ccgccagctc gcatacagtc cgtaatcaaa acagtttcct ctgctccacg
     1801 tgctttgacc acgatttctg ccgcagctgg atgaacatgg tgtccatcac aaatcatttc
     1861 cgcatagaca ttttttaaat tcaaagcagc accgaccata cctggttcac ggtgatgaag
     1921 cccactcatc ccattgtaaa catggacgaa gatattggca ccagcttcta ctgccgcttc
     1981 cgcttgcgca taggtcgcat cgctgtgagc caaggcagta tgaattgcct tgctgttagc
     2041 aaactcgatg aattctttga cgccttcacg ttctggagca atagcaattt tattgactaa
     2101 acctttagat aagctgtgcc agttgtccaa cttttcaatg gacggatcgc tcatgtactt
     2161 aggattttgt gctcccttgt atttttctgt aaagaaggga ccttctaaga aaataccttg
     2221 aatcttggcg cctgtttcct gccctgcata ggtcccaatc gtttcacaaa ctgcatctaa
     2281 attttcagtc gtatctgtta aggtcgttgg aagccaagag gtcaccccac aagacaagag
     2341 accttctgaa attaccttga tcccttcaaa atcattgtcc ataacatcgt gagaagcgta
     2401 gccgtggata tgtgtatcaa ctagccctgg tgctaaatga aagtcagaat aatcaacaat
     2461 ctccccttca ggcttttcag tcacaatccg tccaaactga cccttgtcag taatttccaa
     2521 ataggctgat tcgacctcac tctctggtaa aataatagat tttgctttta taaatactgt
     2581 catattatct cctttattga tatatatact cgctaaactg gttataacca tatactaaat
     2641 atattgtaga acttctatta gaaaatgtca agtaattacc ataactttat aagaaatgga
     2701 tgctgtgaga aggtagaaaa aagagttctt actccgcaaa gtaccgtttc tgaatctgta
     2761 cttggagata agaactctac gtaagcagcg tatactaggc gtcaattcat gacctaacac
     2821 ctgatcctat caaatataaa tatattacaa caattcgttg agaggcttga agatgatacg
     2881 ttccaaatca gctacataag ttcccaactg ttgttgcttg ctgaaatatt ccgtcaaaag
     2941 tggatttccc tgaactttct tattgaaatc caacattttc ttttggtcag cttcagtagg
     3001 aatttcacca gcctgcaatt tagattggat ttctttttgg aaagaaatat aactttccaa
     3061 tatttctttg gcttctgaat tcccctcaac tgagacctta acggcttcca ccgccttata
     3121 ttcaggcagg ttacggattg cacgttccaa ttcatttgcg atatcataga tatttgttga
     3181 cataattttc tcctaatcta aatggatttt gtaagtcgtc tgctctctta aacgtttcgc
     3241 agcgtcttcc aaatttcctt tgtttttaaa cgttatttgt aaaataccgt gtatatcttc
     3301 acggttctct tcattgatac gaatattgac aatggaaata ccccgtaaga cttccaaaac
     3361 cttcaaaatc gtatcttcct catcaggaac actaaggaat aaatcgtaga aagaatcaac
     3421 acctgcacgc ttgtgaattt ccatggcttt acgagtttga cgtcccttat caaaaaagtc
     3481 ccaaattgct ttttgatcgc cagatctgag aacatctgaa atttctgaga gacgtgcttg
     3541 aaattcctcg attcgattta gaatagaatc tgcattggtt agcaaaatgc tagtccacat
     3601 gctcggctca ctttctgcaa tccgtgtcat atctctaaat cctccagctg caaaattatt
     3661 cgtaaaggga tgatcttggg catactcacc agcttgatgc atcaaactag aagccaatac
     3721 gtgtggaaaa tgtgaaattt gactggtcac acggtcatgt tctgccgcat caatctgaac
     3781 aaaacgtgcc cccgttccag ataacaagtc tgtcaatcgg ggaaccgcat cctgcttggt
     3841 agcctgacac ggtgtcataa tgtagtaagc attctcaaat agatggagat ctgctgcact
     3901 ggcaccagat ttatgactac ctgccatagg gtgtccaccg ataaaattaa tttgtcttgg
     3961 cgccaaatgt tcctcagcaa cagccacaat tgcagacttc gttgaacctg catctgtaat
     4021 caagaccgta tccttcaatt caagggcact aaattcttca atcaaacgca aagaaacttg
     4081 aattggaaca caaagaagaa tcacatcagc ctgctttgct acaccctcca attccgttga
     4141 tacctcatca accatcccct tgcccaaggc aatttggcat gattgttcgt tagaatcaaa
     4201 gccaatgagg tgatagtcag gatggtcttt gcgaatacag agcgcaagtg aacttccaat
     4261 caaccctaga cctacaatta aaatcgtttt tttcattaat tacctagaaa tttttgacat
     4321 agtcgcgatg actggctacc gcagctttca attcctccat attatcggaa gagaacttct
     4381 ctaggatttc tgtcgctaga gttgtagcta cgactgattc catgactaca ccagctgctg
     4441 ggagagccgt tggatctgaa cgttccacag tagctttata aggctcatga gtatcaatgt
     4501 caaccgacat caatggctta tagagggtcg gaattggttt cataacacca cgaatgatta
     4561 gggcctcgcc attggtcata ccaccttcga aaccacctag attattggtt cggcgtgtat
     4621 atcctttttc ttgggaccag agaatttcgt ccatgacttg gctccctttg agataaccag
     4681 cttggaagcc tactccaaat tctactccct taaaagcatt gattgaaaca acagcctgcg
     4741 ctaattttgc atctaacttt ttatcccatt gcacataaga ccccaagcca gctggaactc
     4801 ctccaacaac agtctcaatc actccgccaa tagtatctcc atctcgcttg atttgatcaa
     4861 tataggcttt gatttcttct tcacgctctt ggttgacaat ggatacttct gactgggctg
     4921 cacgctcttt gatttctgct acgcttaaac catctgggac atcaatttcc ttccctccga
     4981 aaacgaccac atggttagca atttcaatat ccaactcagc caaaatccgc ttggcaaccg
     5041 caccaacagc cacacgcata gttgtctcac gcgcactaga acgctccaag gaattacgca
     5101 aatcatcaaa gcgatatttc ataccaccaa ctaggtcagc atgtcctggt cgtggatgtt
     5161 tgatacgacg cttatttttg agcttctctt cgatgtcctc aactgccata atatccaacc
     5221 atttttgatg gtctttgttg gtcacattca atgtaatcgg ggcacctgtt gtcttaccgt
     5281 gacgaacacc agccgtaatc tctacgcgat ctgtttcaat ctgcatccga ctaccacgac
     5341 cgtatccccc ctggcgacgt tttaaatctt cattaatatc ctcagctgtt aaaggaagac
     5401 cagctggaac tccctcaata atggctgtta gacgtggtcc atgagactca ccagctgtta
     5461 aataacgcat acttaattct ccaaaatttc caaaaactta cgagtattgc ctaaagacat
     5521 ctgtccaggt gcagatgttt catctaagct ggcaaaagtc cagcaggatc ctgtaatcac
     5581 acctgcaata cgcgttaact tccctagttc acccatagcg attgtcgcaa atgtctgctc
     5641 ggtgttcagc gatttaaaac cacgagtata attcataaca tctaggacat cctgctctgt
     5701 cttagccatt acagccattt taacaacagc tggtgatagg ctagtcagtt cagacatgat
     5761 ttccatataa ttagacggtg tttcctcaaa attatgataa ctcaacacaa gattaggaaa
     5821 ctccaacatc tgctcaaaaa ccgacttata agaataatat tcaaaatcaa tataatctgg
     5881 ctgataaagc gctgcaactt ctttgattaa attgacatat tcttgatcgt ccaaatccaa
     5941 gtggccacct tcacgtgttg ttcggatggt gaaaaccact tccttaccat tacatttttc
     6001 aaatatagca ggtgctactc ttaaaatatc atctttcgga aggtagtctg ctcgccattc
     6061 aacaatatct gcctctgcta gacgttctac atcaatggcc tctacatctt ccagatttct
     6121 aggcataata ggaactacta ttttcattta tctacctgta tcgtaaagac ctttaggtaa
     6181 ttactacttt catcattttt attgattaca aaatcggctg gcaagcggta acttgcctca
     6241 taatggtgtt ttctaacacc aaaacctttt tcaatctgcc gcttaaattt ttcaacagaa
     6301 acatttgcgg cgttggtcga agcgataata gttccacctg tatttagtat ttccaaagat
     6361 tgagaaatca acttgtgata atctttggct actgaaaagg tttgtttctt atttcgtgca
     6421 aagcttggcg gatccaagac aatcacatca taagtcaagc ctttacgttt ggcatatttg
     6481 aaatattcaa atacatccat taccacaaag tgatgattat ctaagtctaa actattaacc
     6541 ttaaagtgag ctttagaaag ttctcgcgag cgtttggcta agtcaacaga agtcgtttcc
     6601 cctgctccgc ccatggcagc agcaatagaa aatgctgccg tgtacgaaaa catgttcaaa
     6661 agtgacttgc ctgccaccag gccatccacc aaggaaccac gtacctcatg ctgatccaaa
     6721 aagatgcccg tcatcagtcc atcattcata aagacctgat agtgaacgcc attttccaac
     6781 acagtgaaat actcaggggc ttcttctcca taaagatgag cagactcaaa ggccaaacct
     6841 ttaaaacgaa tcttctcata agctcctctt acttctggaa atacctgttg aaaggcagca
     6901 acaatcatct ctttgacaga ataaataaag gtattatacc atgaaaaaac tgcgtattca
     6961 tcatacaaat caaccgtcat tccaccaaaa ctatctccat cttgattaaa taaacgaaaa
     7021 gcgttcgtca tctcagattg ataaaaatgt tgacgtttct gtttcgcatc cacgaatagt
     7081 ttaacaaaaa aatccatggt caagtcttga ttgcttctac taaacagcca gcctattccc
     7141 ttattctgtt tggacaaata agcctggccc aaatagcttc cagattctga atacaaaaca
     7201 gccagcctgt cttcatcaaa cgaaaaacct gaaaaatcag cgctatccaa gagttgaatc
     7261 cctctgttta ttttctgttc tgcaatacgg tttaccttta ttttcataga attattataa
     7321 catgtttctt catactatgc caaaaaaact ctaaactttg aggcttattt taaaattatg
     7381 gtataatgaa ctaagctttt agaaaggacc atgaggtttt attgtgaaaa aactaattga
     7441 ctacgtcaag aagatcggac aaactcgact tggcttcgtc ttgattttgc taatcattta
     7501 ctggctcaaa acactctggg cctactatgt tgattttaat ttagataccc aaggattttt
     7561 ccaaaatttt atcgctatta tgaatcctct accagtagga attttattgc ttggtctctc
     7621 gctttatata aagaatacga aatcattcta tagtgtaacg atgaccattt atattgttct
     7681 tttcgcctgg ctcttttcaa atgcagtcta ttatagagaa ttttccgatt atatttccat
     7741 ttctaccatg atggctacct ctagcgtatc tgctggatta ggagaagcag ctcttaagtt
     7801 atttaggcta tgggatattg tctattttct tgattttata gcttttggtt tcttagtcta
     7861 ccgtaaggca tttcactggg acaaaactcc atttcataaa aaatctagct ttgccatcac
     7921 agccttttca gtattattat tctctatcaa tctcttttta gcagaaattg atagacctga
     7981 gctacttacg agaggatttt ctaatactta tatcgtcaga gcccttggtt taccagcttt
     8041 ccttggctac aatgctaatc aaacctacaa tgcccataag gatcgctctg gggccaccgc
     8101 ctcagacctg gagcctgtaa aacaatatat tacagaacat tatgctcagc cgaatgacaa
     8161 ctacttcggt attgccaaag gacgaaatgt tatctatctc cacctagaaa gcttacaaca
     8221 atttgttatt gactataagt tgaacgtcaa cggtatcgaa tacgaagtca cacctttcct
     8281 caattctctg tatcattcta gctctactct cgccttttct aatttcttca accaagtgaa
     8341 ggcaggtaaa acctctgatg ccgaaactat gattgaaacc tcactttttg gactcaatca
     8401 aggctctttc atggtccaat atggtggaag caatacccag caagccgcac catatattct
     8461 ctctcaaaat ggtggctata catctgctgt attccacgga aatgcagcca gtttctggaa
     8521 taggaacaac acctataaac aatggggtta caattacttc tttgatcaat cctatttctc
     8581 taaagccact gctgaaaatt cattccaata cggtctgaat gataaaatca tgttcgccga
     8641 ctctatccaa tatctggaac atttacagca acccttctat accaaattta tcacagtttc
     8701 caaccactac ccctatacaa ccagcttgat tggggatgag attggctttc cattagccaa
     8761 tacagatgat gaaaccatta atggctattt tgctactgca aactatctcg atgcgtccat
     8821 aaaggcattt tttgattact taaaagcgac tggcttgtac gaaaactccg tcatcgttct
     8881 ctatggtgat cactatggaa tttctaattc acgcaatcct gacttggcac cgttgattgg
     8941 aaaagattct cagacttggt cagattttga caatgccatg atgcaacgtg ttccatatat
     9001 gattgttgta cctggaatga ccaacggtgg gatttttgat acctatggtg gtgagattga
     9061 tgcacttcct actctcgaac atcttttagg aatcaaatcc gataactatc ttcaagttgg
     9121 tcaagaccta ctttccagcc aacacagcca aattgtggct cttcgaaccg ctggcagttt
     9181 catcacacca aaatacacta gctacgaagg taaaatttac tatacagaaa ctggtcttga
     9241 aattacaaat ccagatgaga caactcagaa agaaattgat gcaattaaag aagctaccgc
     9301 agcacaactg gcgactagcg atgccattca aactggtgac cttatccgat tcttcgacaa
     9361 tggattgcca gccttggatt caagtcaata taactacatt gactcattgg ctgccgagat
     9421 tgcactggag aataaacttg gtacacaatc gacaagtttg tatagtaaaa acggcaataa
     9481 gtcaacaatt gaactattta aagcaccaag ctacctagaa cttcacggta gtacaactgc
     9541 tactagcaca ccaaatactg gtactacctc aacaagtacc agttcaactt cgcagtaata
     9601 cactaaaagg cttagaatca tgtcagttac tacattgatt ctaagccttt
//
LOCUS       DASFQS010000081         9640 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.083, whole genome shotgun sequence.
ACCESSION   DASFQS010000081 DASFQS010000000
VERSION     DASFQS010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9640
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.083"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            153..1832
                     /locus_tag="U1041_001723"
     CDS             153..1832
                     /locus_tag="U1041_001723"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012745.1,HMM:NF013652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4768817.1"
                     /translation="MHIAFSATDSYADYLGTTIYSIIQHHPNQELHFYVLTKWMSDHS
                     RFKLNRLTSQLVSISFIEIDSKTFEHLPLKEGISLETYFRILLPSQLPELDRILYLDC
                     DILVKGSLNPLWESDLTHHYLAGVNELDMLHDNSDYRQKIGFTPQDIYVNAGVLLFNL
                     ELMRQDKIEEFLFAKAQEIKNYIEYQDQDIINIGLKGQILNLEAKYNMTAYQRKVKHI
                     SLEEAVIIHFNWHKPWRKDQNYLQYNRESFELYRRTFQAYLSTVEPAVTLLVNAWQTR
                     PASLSQCLASVFEQDYKNLQILLLLPKDQPELEEILIPYLTKEHPVMVIKKDFATKME
                     AYYAGLAHVKTSYFSMIEAEDWLDKTHISSLYHQLVEQDTFIASAPFTLLEEEEGIYK
                     MFEPDLADGHRQTSYLLENLFGLKWYETFRHTHLDGKLYHSTIIQRAGQLASYHSEDL
                     LACLFYLVGESVAFVNNRTYVKRSSFLSKAQLETEEAIRTRMEELSRFASYLAFCKLS
                     LSHYQTYYKQELYDLLVTAQKLEKEELATKIEAKLNELQFLGQLPHHKSFY"
     gene            1842..3488
                     /locus_tag="U1041_001724"
     CDS             1842..3488
                     /locus_tag="U1041_001724"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012745.1,HMM:NF013652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4768818.1"
                     /translation="MNLAFTVSDSYIDYMGTTLYSIMVHTRKSPVSVYVLTSDISDYS
                     RFKLQKLEDRFHNLNIHILVVDTKQFEDLPLNRSHITRPEVYFRMAFASLLPDLDRIL
                     YLDSDILAQKDIQPLWETPLEGAYMAAVSEPPSEGGFDYRRSIGMTDPTYYFNSGVLL
                     MDLKKIREDKIESLLFECGHAIKDKIRLQDQDIINVALEGKIKALDPIYNYSYMERQA
                     NLRKEADIVLNHFSLEKPWNRQLDVPEYNRLAVNRYLECHQAYLQFIEPKISLVLPIF
                     EAADNLDKTLDSIAQQVYRNIDCIILDYSADKETKEKCLAAVKPSSIFRYYHFTPNNQ
                     HNFLKEGLEKMAGSYLSLIYANDWVDSFYLAKLFLALEENQADISKVSCSQFEQTTGN
                     FYFFNPLWQEKQVLDGKSYLQQTQLAPSQQVAYYQSLSGMLLAPQVVTRAWLRRKELP
                     SQLLTRFLLHSQASLVYLPEVAYISSNSQPVQAIITSSQEASDYFTALMAYHILTKGA
                     DKDFYRHELLALSKEIAVLPPNLAEEIDIQLALLGEGIKI"
     gene            3550..5079
                     /locus_tag="U1041_001725"
     CDS             3550..5079
                     /locus_tag="U1041_001725"
                     /inference="COORDINATES: protein motif:HMM:NF025025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4768819.1"
                     /translation="MLTENKLVSLLLPIYNETSLTTIENICKQSYKNIQLILLNYNTD
                     INIQVPDVCSHYPLDEEKVDILTVDLASPLGLDLLKLVKGQYLISLNHIDELDDSFIK
                     TALNSAEQYQSDIVLLENCNFNENDGNYYFHTNLFNEETVTAETVKKHFQTSPRHKTY
                     LTNPYCKLFKTSYVRDNHIDLAHDLIPKSYETDKISYVKETLYVYRKIKEELISVIVP
                     VYNVENYLHECLDSILNQTYQNLEIILVNDGSTDSSGKICDDYAAKDGRIKVIHQENG
                     GLSDARNKGLDAMTGQFVTFVDSDDYLGNHCIETLYIYSQTCQADIAIGKYIEFEEDN
                     KLFVFPNSQNSVNKIEMLTGEQCLEKYHRYFSFIAVTAWAKLYRANLFNDNTPYKSIR
                     YPVDVLHEDQYTTHKLFFKSQKNIFVDEYLYVYRRRENSITKTQLSEKRIMDEIKGFE
                     EKIIDFALLNKDMTYLKECYIYLLNQHKTYLENHQQQDCEVYEYIGKRLMTYFNWQDK
                     P"
     gene            5154..6152
                     /locus_tag="U1041_001726"
     CDS             5154..6152
                     /locus_tag="U1041_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEM4768820.1"
                     /translation="MKVHITNLYGQSPLSVALMAQNMVADIAKKLDIKEIGIYSFNAD
                     GESVENLAIRFDGMNAAVGNGDVIIFQAPSWNGTHFDHEYLKRLRIYSGIKIVIFIHD
                     IPPLMFSSNFYLMEKTIEMYNMADLIIAPSQKMLDLLYQHGLRVTNTLLQNMWDHKTD
                     IWLEKPAFQRVLNFTGNPQRFHFVDDWQFATPLNLFAPEYYPTKPNNVAYQGWKYSLS
                     LLQELNKNGGFGLVWSQGEDAEYYNLNVSYKLSTYIAAGLPVIAPRSLSNAHYISEYK
                     LGFLVDSLEEANAIVSTITEEEYRSLLDSLWNFRELITKGYFAQKLLTDAVHQVMI"
     gene            6166..7050
                     /locus_tag="U1041_001727"
     CDS             6166..7050
                     /locus_tag="U1041_001727"
                     /inference="COORDINATES: protein motif:HMM:NF021616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4768821.1"
                     /translation="MDDLISVIVPIYNVENYLRQCLDSIISQTYQNLEILLIDDASTD
                     DSVAICQEYQSRDSRIRLIKKTENRGVSDSRNLGLKNMTGDFVTFVDSDDYLNHDMID
                     RLYQLAVTEQADIVMGDYYRFVEENSTFLIHNYEDFYETLSFEDYLDRVFTGATDNYI
                     TVWGKLFNSSLFVQDYQILFPTLNQANEEQQVTHLLFLKSKKTIYLSYAGYCWRKRPN
                     SLTSSATSIQHIADDLDGFEKRYFDLLLLGHDLSKAIAFYKLRISGYKQTLEELGYCH
                     HPVYHRIRKHLSLYTRGS"
     gene            7242..8114
                     /locus_tag="U1041_001728"
     CDS             7242..8114
                     /locus_tag="U1041_001728"
                     /inference="COORDINATES: protein motif:HMM:NF025953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HEM4768822.1"
                     /translation="MKHKLPINYLGQFYNLELEEHADIQVDDGIIAKNFCSFEVKNYA
                     TLRIGKQVFFNSSCVLRCMEKVTIGDYCLFGDGVKIYDNNHHYSHHHIETISFSTAPI
                     TIGRHCWVGANSVILKGVTIGDNVIIGAGCTIYKDVPANTIVTSSGTMTYRPRPQFDK
                     QVTTFTASDTLEHLEYLVTSLPDIAFNILAGTHISPHLNSFRRFSNVNIYSNINDTEL
                     EDEILDRTSIYLDINHWWEVKDILNRCQQKQIPIYSFDTVAHQPELTNTMISSNHPEE
                     MVQAIQDFFKERDT"
     gene            8114..9010
                     /locus_tag="U1041_001729"
     CDS             8114..9010
                     /locus_tag="U1041_001729"
                     /inference="COORDINATES: protein motif:HMM:NF025025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4768823.1"
                     /translation="MEKPLISVIVPIYNVENYLRQCLDSIIGQTYQNLEILLIDDVST
                     DSSVSICQEYQARDERIHLLKKTCNSGVANSRNLGLENMTGDFVTFVDSDDYLETTFI
                     EDLFTQLTLHEADIVIGEYYGFDENNGIYYIHSQEVRTEVLTIENYFSHLLTVGTITF
                     LTAWGKLFRSHLFTSKEHNRYIRFPNVRVAEDRYTTHLLVLNSHKTVYYSKNLYCYRK
                     RKGSLSDAPSSPANTLSDIKGYETLIIDMLLAGLDPSLAVDCYKQRLLYHQQQHLTHK
                     VTENDTYRYILQKLGIQSSSDS"
     gene            9089..9361
                     /locus_tag="U1041_001730"
     CDS             9089..9361
                     /locus_tag="U1041_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HEM4768824.1"
                     /translation="MKLKERLKLHMFWIGLVSLILMLIDNIASSYFGYNISQELNKIE
                     QTICIILSILLFLGILSNKKDSYGQETLDTISHKKEASDRNTTGEQ"
BASE COUNT         3099 a         2116 c         1767 g         2658 t
ORIGIN      
        1 agttttgtag cgaactctgt tcgccctatt tccaacctcc aactatctcc cagatagttg
       61 gagctagtac taaaagtaaa ctaaaagacc ttattatcca caaaagagca agactaggta
      121 gatttagaac taaaaaaaca aaggagaacc ggatgcatat cgcatttagt gctactgatt
      181 cctatgccga ctatctagga acgaccatct attccatcat tcaacaccat cctaaccagg
      241 aactgcattt ctatgtattg accaaatgga tgtctgacca tagtcgtttt aaactcaatc
      301 gcctgacttc tcagctggtg agcatttctt ttattgagat tgatagtaag acttttgagc
      361 accttccttt gaaagaaggt atttcgctcg aaacctattt caggatcctg ttgcctagcc
      421 aactgccaga actggaccgc atcttatatc tcgattgtga catcttggta aagggctcac
      481 tcaaccctct ctgggaaagt gacctgactc accattacct ggccggagtc aacgaattgg
      541 acatgctcca tgataactcc gattatcgac aaaaaatcgg gttcacccct caggatattt
      601 atgtaaatgc aggggtactt ctctttaacc tagagctaat gcgccaagac aagattgagg
      661 aattcctctt tgccaaagcg caagagataa agaattacat tgaatatcaa gaccaagata
      721 ttatcaatat cggtttgaag gggcaaatcc taaaccttga agccaagtac aatatgactg
      781 cctatcaacg caaggtaaaa catatctcgc tggaagaagc ggtcattatc cacttcaatt
      841 ggcacaagcc ttggagaaag gaccaaaatt atctccaata caatcgcgag agtttcgaac
      901 tctatcgcag aacctttcaa gcctacctct ccactgtcga gccagcggtt actctcctag
      961 tcaacgcttg gcagaccaga ccagcctccc tcagccaatg cctagccagc gtctttgagc
     1021 aggattacaa gaacctacag attctactcc tgctaccaaa agaccaaccg gaactggaag
     1081 aaatcctgat tccttacctg accaaagagc atccagtaat ggtgatcaaa aaagactttg
     1141 ccacaaaaat ggaagcctat tatgcaggac tagcacacgt caaaaccagc tatttcagca
     1201 tgatagaggc agaggactgg ctggataaga cccatatttc atccctctac catcagcttg
     1261 tggagcaaga taccttcata gccagtgcgc cctttacctt actagaagag gaggagggga
     1321 tctacaagat gtttgagcct gaccttgctg acggccaccg acaaaccagc tatttgttag
     1381 aaaacctctt cggcttaaaa tggtatgaaa ctttccgtca tacccaccta gatggcaaac
     1441 tctaccattc cactatcatc cagagagcag gtcaactagc cagctatcac tcagaagatt
     1501 tactagcctg cctcttctac ttggtcggcg aatctgtagc ctttgtcaac aatagaacat
     1561 atgtcaaacg cagctcattc ctctcgaaag cccaactgga aactgaggaa gcgattcgta
     1621 ctcgaatgga agaattaagt cgatttgcta gctatctagc cttctgcaag ctctctctct
     1681 ctcattacca aacatactac aaacaagaac tctatgacct gcttgtgact gcccagaaac
     1741 tagagaaaga agaactcgct accaagatag aagcgaagct caatgaattg caattcttag
     1801 ggcaacttcc tcatcacaag tcattctatt aaggaaacat tatgaaccta gcatttactg
     1861 tcagcgattc ctatatagac tacatgggaa ccaccctcta ttccatcatg gtgcatacaa
     1921 gaaaatcccc tgtttccgtc tatgtcctca catctgatat atcagactat agtcgcttca
     1981 aacttcaaaa attagaagac cgatttcaca atctaaacat acatatcctt gtggtggata
     2041 ccaaacagtt cgaagactta cctcttaacc gtagccatat cacacggcct gaggtttatt
     2101 tccgcatggc ctttgccagt cttcttcctg atttagaccg tatcttgtac ctagatagcg
     2161 atattctagc tcaaaaggat atccagcccc tctgggaaac tccattagag ggtgcttata
     2221 tggccgcagt tagtgaacca ccatcagaag gcggttttga ctaccgtcgg agtattggga
     2281 tgacggaccc gacctactac tttaactcag gggttctact catggacctt aaaaaaatca
     2341 gagaagataa gattgaaagc ttgttatttg aatgcggaca tgccatcaag gataagattc
     2401 gtctccaaga ccaagacatt atcaatgtcg cattggaagg gaagataaaa gccctagacc
     2461 ctatctataa ttacagctat atggaaaggc aggcaaatct tcgcaaagag gccgatattg
     2521 tgttaaacca ttttagctta gaaaaaccat ggaatcgcca acttgatgtt ccagagtaca
     2581 atcggctcgc agtcaatcgt tacttggagt gccatcaggc ctatctccag tttatcgagc
     2641 ctaaaatcag cctagtactt cctatttttg aagcagcaga caacttggac aaaaccttgg
     2701 attccattgc tcaacaagtt tatcgcaata ttgattgcat cattttagat tattcagccg
     2761 ataaggaaac aaaagaaaag tgtttggcag cagtgaaacc ctcctccatc ttccgctact
     2821 atcactttac accaaataat cagcacaatt ttcttaaaga aggtttggaa aagatggcag
     2881 gtagctatct cagtctgatt tatgcaaatg attgggtaga ctctttctat ctcgccaagc
     2941 tctttctagc actagaagaa aatcaggctg acatcagcaa agtcagctgt agccaatttg
     3001 aacagactac tggtaacttc tactttttca accccttgtg gcaagaaaaa caagttctgg
     3061 atggaaaatc ttacctacaa cagacccagc tggcacccag ccagcaggtc gcctattacc
     3121 aatccttgtc tggtatgctc ctagctcccc aagtggtgac aagggcttgg ctaagaagaa
     3181 aagaactgcc tagccagctc ctgactcgat tcttgctaca ttcccaagca agtctggtct
     3241 atctaccaga agtagcctat atttctagca atagccagcc tgtccaagcg ataataacca
     3301 gcagtcaaga agcctcagac tactttactg ctctaatggc atatcacatc ttaacaaagg
     3361 gagcggacaa agacttctat cgtcacgaac tgctggccct gtcgaaagaa atcgctgttt
     3421 tacctccaaa cttggcagaa gaaattgata tacagcttgc acttttgggg gaaggaatta
     3481 aaatttgata aactaaacct tcctaccctg ttttcatctt atataaattg aaagggttaa
     3541 accgaaacaa tgttgactga aaataaatta gtaagcctcc tactccccat ctacaatgaa
     3601 acaagtctaa caactattga aaacatttgt aagcaaagct acaaaaatat ccaactcatc
     3661 cttctaaact acaatactga tataaacatt caggtaccag atgtctgctc ccactaccca
     3721 ctggatgagg aaaaggtaga catcctaact gtcgacctag caagtccgtt aggactagac
     3781 ttgctcaagc tggtcaaggg gcagtacctg attagcctca atcacatcga tgaactggat
     3841 gattcattta tcaaaacagc cttgaacagt gctgaacaat accagtctga tattgtactg
     3901 ctggaaaact gtaactttaa tgaaaacgat ggtaactact acttccatac caatctattt
     3961 aatgaagaga cagtgacggc tgaaactgta aaaaagcact tccagacttc ccctagacat
     4021 aaaacctatc tgacaaatcc ctattgtaaa ctcttcaaaa caagctatgt aagagacaac
     4081 catatcgatt tagcccatga tttgataccg aagagctatg aaaccgacaa gatttcttat
     4141 gtcaaagaaa ctctctatgt ctatcgaaaa atcaaagaag agctgatcag tgttatcgtc
     4201 cctgtctaca atgtcgagaa ttacctacac gaatgtctgg atagtatcct caaccaaacc
     4261 tatcaaaatc tagaaattat cctggtcaat gatggttcga ctgatagttc aggcaagatt
     4321 tgtgatgact atgccgcaaa agatgggcgg ataaaggtca ttcatcaaga aaatggcgga
     4381 ctatctgatg ctcgaaataa gggactggat gccatgactg gtcagtttgt aacctttgtt
     4441 gatagtgatg actatcttgg aaatcattgt atcgaaacct tatatatata ttcacaaact
     4501 tgtcaggcag acattgccat tggcaagtat atagagtttg aagaagataa caaattattt
     4561 gtattcccta attctcaaaa tagtgtcaat aaaatagaaa tgttgactgg agagcaatgc
     4621 cttgaaaaat atcatagata tttttcattt attgctgtga ctgcttgggc taaactatat
     4681 agagccaact tattcaatga taacacccca tataaatcca tcagatatcc tgtagatgtc
     4741 ttgcatgaag atcagtacac gacgcataaa ctgtttttta aaagccaaaa aaacattttt
     4801 gtcgatgaat atctatatgt gtacagaaga cgagaaaata gcataaccaa aacgcaacta
     4861 tcagaaaaac gtattatgga cgaaatcaag ggctttgaag agaaaataat tgactttgcc
     4921 ttattaaaca aagatatgac ctatctaaaa gaatgctaca tctacttact aaaccaacac
     4981 aaaacctatc ttgaaaatca ccagcaacaa gattgtgagg tgtatgaata tataggaaaa
     5041 agattgatga cctatttcaa ttggcaagat aagccttaaa tagtatgttt tttgggtaga
     5101 ctagaaacaa atcgaaacag tataacaagt acaaaaataa gaaaaggaaa acaatgaaag
     5161 ttcatattac caacctctat ggccaatccc ccctgagtgt cgcccttatg gctcaaaaca
     5221 tggtcgcaga tattgcaaaa aaattagata tcaaagaaat cggcatttat agtttcaatg
     5281 ccgatggcga aagcgttgaa aatctggcta ttcgatttga tggcatgaac gctgctgtag
     5341 gaaatggcga tgttatcatc ttccaagcac ctagctggaa cggtacccac tttgaccatg
     5401 aatacctcaa acgtctgaga atttattctg gcataaaaat tgtcatcttt atccatgata
     5461 ttccaccact catgttcagc tccaacttct atctgatgga aaaaaccatt gagatgtata
     5521 atatggctga cttgattatc gctccttcac agaaaatgct agacctgctc taccagcatg
     5581 gccttcgtgt caccaatact cttttgcaaa atatgtggga tcataaaacg gatatttggc
     5641 ttgaaaaacc agccttccaa cgggttctca acttcacagg aaatccacaa cgtttccatt
     5701 ttgttgacga ctggcagttt gcaacaccgc tcaatctctt tgcgccagaa tattacccaa
     5761 ccaaacccaa caacgtggcc taccaaggtt ggaaatacag tctcagccta ctccaagaat
     5821 taaataaaaa tggtggcttt ggtcttgtct ggtcacaagg agaggatgca gaatactaca
     5881 atctcaacgt ttcttacaaa ttaagcacct acatcgcagc aggtctacct gtcattgcac
     5941 cgcgtagcct ctccaatgcc cactatattt ccgaatacaa gctggggttc cttgtcgata
     6001 gtctggaaga agccaatgcc atcgtttcca ctatcactga ggaagaatac cgttccctcc
     6061 ttgattctct ttggaatttc cgagaactga ttacgaaggg ctactttgct caaaagctac
     6121 tgactgatgc ggttcatcag gttatgattt aggaggagac acagtatgga cgatttaatt
     6181 tcagttatcg ttcccatcta caacgtggaa aattatctaa gacaatgttt agatagtatt
     6241 attagtcaaa cctatcaaaa cctagaaatt ctccttattg atgatgcttc gacagatgat
     6301 agcgtcgcta tctgtcaaga ataccaatcc cgtgatagtc gcattcgctt gattaaaaaa
     6361 actgaaaacc gtggtgtatc agactctcga aatcttggtt taaaaaatat gactggcgac
     6421 tttgtcacct ttgtggatag cgacgactat ctcaatcacg atatgattga ccgactttat
     6481 cagcttgcag tcacggaaca ggccgacatc gttatgggtg attactaccg ttttgtcgaa
     6541 gaaaattcta cttttctcat ccacaattac gaagatttct atgaaactct ctcctttgaa
     6601 gattatctgg atagggtatt taccggcgca acggacaatt atatcacagt atggggaaaa
     6661 ctgtttaaca gttccttgtt tgttcaagat tatcaaattc ttttccctac tcttaatcaa
     6721 gccaacgaag aacagcaagt gacacatttg ctatttctaa aaagcaaaaa aacaatctac
     6781 ctcagctatg ctggttactg ctggcgcaag cgtcccaata gtttgaccag ctcagcaact
     6841 agtatccagc acattgccga tgacttagac ggttttgaaa aacgctactt tgatctcctc
     6901 ttgctcggtc atgatttatc caaagccatt gccttttaca agctcaggat aagtggatac
     6961 aaacaaactt tagaagaatt gggctactgc catcatccag tctaccatcg gattagaaaa
     7021 cacctttctc tttacactag agggagttga ctgttataga tatgtatttt gcaacgcaaa
     7081 agtgtatcaa tctccgcatc ttttaaatcg gtctcgtttc tcttactata gttatcgaac
     7141 aagcagatat cttgcgatac tagaagaaca aggaaaaaca aatacagaaa tatataatag
     7201 actattaaaa tttgcctatt tgatagaaaa tggaaagcga tatgaaacat aaactaccaa
     7261 tcaattattt aggccaattc tataatttag aacttgaaga acatgctgat attcaggttg
     7321 atgatggaat tattgccaaa aacttttgta gctttgaggt caagaattat gccacattac
     7381 gaatcggcaa gcaggtcttt tttaactcct cctgtgttct aagatgtatg gagaaagtga
     7441 ccatcggtga ctattgtctg tttggtgacg gtgtcaaaat ttatgacaac aatcaccact
     7501 actcccatca ccatattgaa accatctctt ttagcacagc ccctatcacc attggacgac
     7561 attgttgggt cggagctaat tctgttatcc taaagggggt gaccatcggt gacaatgtga
     7621 tcatcggagc aggctgcacc atctataagg atgtccctgc caataccatt gtgacctcat
     7681 caggaactat gacctatcga cctcgaccac aatttgacaa acaggtcaca acctttacgg
     7741 catccgatac tctggaacac ttggaatacc tggttacttc cctgcctgat attgctttca
     7801 atatcttggc tggaacccat atctctcctc atctcaatag ttttcgtcga tttagcaatg
     7861 tcaatatcta tagcaatatc aacgatactg aactggaaga tgagattttg gatcgaacgt
     7921 ctatctatct ggacatcaat cactggtggg aagtcaaaga catcctcaac cgctgtcagc
     7981 aaaaacaaat tcccatctat agttttgata ctgtcgccca tcaaccagag ctaacgaata
     8041 ccatgatttc gagtaaccat ccggaagaaa tggtgcaggc tattcaagat ttttttaaag
     8101 aaagggatac ctaatggaaa agccacttat ttcagttatt gtccccatct ataacgtaga
     8161 aaactatctc aggcaatgtt tagatagtat tattggtcaa acctatcaaa acctagaaat
     8221 tcttctcatt gatgacgttt cgacagatag tagcgtaagc atttgtcaag aataccaagc
     8281 acgagacgag cggattcatt tactaaaaaa gacatgtaat tctggtgtag caaattcacg
     8341 aaatttaggt ttagaaaaca tgactggtga ctttgtcacc tttgtggata gcgacgacta
     8401 cctcgaaaca acattcatcg aggatctgtt tacacaactt accctccatg aggctgatat
     8461 cgtcattgga gaatactatg gtttcgatga aaacaatggc atctactata tccattctca
     8521 agaagtgagg acagaagtat tgacgattga aaactatttt tcacatttat tgactgtagg
     8581 gactattacc ttcttaactg cttggggcaa attgttccgt agtcacttat ttacttcaaa
     8641 agaacacaat agatacattc gctttccgaa tgtgagagta gcggaagaca ggtatacgac
     8701 acatttactt gtcctcaaca gtcataaaac agtctattat tctaagaatc tctattgcta
     8761 ccgaaaaaga aagggaagtc tttcagacgc accttcttcc cctgctaata cattaagcga
     8821 tatcaaaggc tatgaaacct tgattattga catgcttctt gctggtcttg accctagcct
     8881 tgccgtggat tgctacaaac agcgtctctt atatcaccaa cagcagcacc tgactcacaa
     8941 ggtaactgaa aatgatactt accgatatat cctacaaaaa ttagggattc aatcctcatc
     9001 cgatagttaa tcggtctacc atcggattag aaaacagcta tccttttggg ctatcaggag
     9061 aaaatttcaa tgacagaaag ggattcatat gaaactaaaa gaacgtctca aactccatat
     9121 gttttggatt ggtcttgttt ctcttattct catgctgatt gacaatattg cctcaagtta
     9181 ttttggctac aatatcagtc aggaattgaa taagatcgag caaaccattt gtattattct
     9241 cagtattctt ctatttttgg gcatattaag taacaagaaa gacagctatg gtcaagaaac
     9301 ccttgatacc atcagccaca agaaagaagc ttctgatagg aacactacag gggagcagta
     9361 aagctttgaa aacttgatag tgattcaggc tgacagcttg tggcggatat atagcaaacc
     9421 aaattaaaaa caggattagc tacgtttatc aatttgagaa ctctaaagtt attttaggag
     9481 ggtgttgctg acactataac tcaaacttgt cctttcccta atccaaacca ctataaaaag
     9541 ctgagcttgt tatccggatt ttatactcaa tgaaaatcaa aattagacta gccccaaagg
     9601 tttggggaac cttggggggg ggtggagata aagcgaacgt
//
LOCUS       DASFQS010000082         9330 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.084, whole genome shotgun sequence.
ACCESSION   DASFQS010000082 DASFQS010000000
VERSION     DASFQS010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9330
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.084"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(92..601)
                     /locus_tag="U1041_001731"
     CDS             complement(92..601)
                     /locus_tag="U1041_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEM4768825.1"
                     /translation="MERVKRKESLFVESVVEALWELLEDKSFEKISVSELVERAGIGR
                     VTFYRNFSNKEEVLERSFNLELQAWLTERQIDLSDWSDAHLLLALRQFFDFWYEQQDK
                     IRLLTANHLDYLLEEVLDRYFKERLGDMTDDFHLQFIVGGFFRVLKTWVTRGCKESPD
                     DIMWLMGEQ"
     gene            745..1863
                     /locus_tag="U1041_001732"
     CDS             745..1863
                     /locus_tag="U1041_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pectin acetylesterase"
                     /protein_id="HEM4768826.1"
                     /translation="MKKVWKIVSAVVVALALLGFIAYKMTFGWSAPELVHQTPQVNEW
                     HRLSPEGVVDSQGNQAHGLLRIGKEKNKVMVYFFGGGVSINEETASGGTQYYATTTGH
                     QDYVATWGIGSPQEDNPFKDWTMIVLPYGTGDFHAGTQNFSYVDDHGKEQVVHHQGYS
                     NLMSILAAAKPHVGNPDTLLVTGFSAGGFATSLLADDVISHFPTAKNVTVAVDSSFLR
                     HDNWKSIAENVWKTPTSISDRLHSDNIVLDSLVALHEKRGDSVKILFDISYRDGILQQ
                     YQAYIDQGKLADATEESSEHFQKELKKMIQELQSQIDGVGIFVWNYGQDEKTTATQHT
                     TIKFSTFFTPMSQDKSVAEWLDDAVNGEVKSYGLELLD"
     gene            1873..2892
                     /locus_tag="U1041_001733"
     CDS             1873..2892
                     /locus_tag="U1041_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM4768827.1"
                     /translation="MKKFKKIILWILGIVASLGIIAYVSVTNHPQLMVGVIQSFMYKE
                     SSPNSYSPLYAPIDGLKENGQYLKSEIAYSKDYPNSFLDITYPDQNFEVDRPTLFYFH
                     GGGFFGGSKNMGDPLAASQATYLIDDIVSKGYNVVNVDYALVPDYHFPTPVIQMNQAI
                     AYIKEHAEEYHLNMDNVVLMGSSAGAIMVAQYGSVLANQEYAQLLNIEPSIAKEHVKA
                     LVIDDAPLDYAKFSLSTKILVGNYVSETIYLSEEEINAYNPISHVNKDYPASFLLGSE
                     YRTDMVSLNKALKQAGVENELVDPLAEEGLEKPHGFVANLRTDPVSAKAFERMMTFID
                     DRTKE"
     gene            3114..4397
                     /locus_tag="U1041_001734"
     CDS             3114..4397
                     /locus_tag="U1041_001734"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEM4768828.1"
                     /translation="MSVSFEAKETNRGVLTFTIGQDAIKPELDRVFNKVKKDINLPGF
                     RKGHLPRAVFNQKFGEEALYQDVVNALLPAAYEAAVAEAGLEVVAQPKIDVVSMEKGQ
                     DWTITAEVVTKPEVKLGDYKNLAVSVEATKEVSDEEVDAKIERERNNLAELVIKEGPA
                     AEGDTVVIDFVGSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHAAGEEVNVEVT
                     FPEDYQAADLAGKPALFVTKIHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKEL
                     EAAKEVAFDDAVESAALELAVENAEIVELPEEMIHEEVHRAINEFLGGMQQQGISPDM
                     YFQITGTTREDLHKQYEADAEKRTKTNLVVEAVAKAEGFEATEEEINKEIEDLAATYN
                     MEVAQVRTLLSPDMLKHDITVKKAVEVITSTATVK"
     gene            4537..5457
                     /locus_tag="U1041_001735"
     CDS             4537..5457
                     /locus_tag="U1041_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000744528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM4768829.1"
                     /translation="MLKKVIRGCFVALFGFVLAACSAQKEASQVQPGMKIVTSFYPIY
                     SLVKEVSGNKNDVRMIGSRQGIHSYEPSAADIKAIYDADVFIYHSRILESWAGRLEPN
                     LQGSSVKVLEASTNLPLTKVPGLEDMEAGQGIDEASLYDPHTWLDPVLVGQEAVAIGE
                     LLAESDPKNADYYRQNAATLEEKAQKLADKYIPIFAKASSKTFVTQHTAFSYTAQRFG
                     LKQLGIAGVSEEEPSPRQLAEIKEFVDTYKVQTIFTEKGTSDKLAKALATSTGVDLKV
                     LDPLEADPENNLTYLENLEQVLETLAQELR"
     gene            5479..8592
                     /locus_tag="U1041_001736"
     CDS             5479..8592
                     /locus_tag="U1041_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pneumococcal-type histidine triad protein"
                     /protein_id="HEM4768830.1"
                     /translation="MKKKAVVGSVAALVLGMSLCSYQLGRFQAMEEQKNRVSYIEDSQ
                     SAQTTVAEQLTPDQVSAKENIDAEQIVVKITDQGYVTSHGDHFHYYNGKVPFDAIFSE
                     ELVMKDPNYVLQDSHIINEVQDGYVIKVDGKYYLYLKDPSKHKNVRSKEEVERQKGIS
                     SADSKNQAAGNSKDGRYRTDDGYVFNPTDVIEDTGDGFIVPHGDHFHFIPKKDLSAAE
                     LKAAQDYWNQKGSVSSASGSQYGDRNNRAQQTTISAGQGQDLASLLAQLDATPLSQRH
                     VEADGLVFDPRTITKKTAAGVIVPHGDHYHFIPYSQMSPLEEKISRMIGVNGAGVSSG
                     AQASHSQHTPTQPNRPVTPIGTVTTQPVSPTQPKRSTGKVVSYMGRQIPAYGKGLDGK
                     AYFTSDGYTFSKDSITSVDDQGLIASHGDHFHYVGFGELEDFEIKQVEEWVNEKAGKQ
                     VPPKTSEQVGNDANPTTPSQGNDSKPVKPIQEENRPAFEYKQVTAKRKLAGKVVYEME
                     VGGKTYTYGRDELDLMKISFAELTLAEKDKQYIFDIAPLAEGDLKPAMLVGMDQIPMK
                     GANATYDTGQSFIIPHIDHIHVLPYTWLSKEQIATIRYIMQHPEIRPSAWTTSGHGDG
                     EATNLVPPILNATPKANRLGLKNWQIIHTAEEVMDARAKGKFATNDGYIFSAEDVLDP
                     ASFVFSQAFSLPRATGGSLRSISKKDLSKEELEAVQTLLDKRDAEELAKNVTPIEKRA
                     GLKNWQIVHSAEELAEAKATGKYTTKDGYIFDPADLLDPKVKIGTDNYRIPRVITDGY
                     RRINKSDLNYLSELIPAEAMVAQREKSNSSSPSTPAPTEIGASAGETTTPEQPQVAKE
                     TAEEIYNRVEAKKVVPFEALTYNAGYATEVRNGTLVIPHQDHYHYVSFKWFDQGSARS
                     PEGYSLEDFLATVKYYMTNPQERPVSDDGWGVFTPNTASESTEEIETEESDEEIDEFT
                     EELKRRAEEFGMDFKTFEQSLVTLSDRYKVSFEAFEYDGTSKVVRLVDKDGVKRTISL
                     PSLEEQV"
     gene            8719..9300
                     /locus_tag="U1041_001737"
     CDS             8719..9300
                     /locus_tag="U1041_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HEM4768831.1"
                     /translation="MELNVFAGQEKSELSMIEVARAILEERGRDNEMYFNDLVNEIQN
                     YLEKSNSEIRAALPTFYSDLNVDGSFIPLGENKWGLRSWYAIDEIDEEVITLEEDDED
                     APKRKKKRVNAFMDGDDDAIDYGHDDPEDEDNYPGSASSEYDDENPDDEKDEVESYDS
                     EINEIIPDDELDEEDVDLGEDDDEYSDEEVVDE"
BASE COUNT         3034 a         1818 c         2083 g         2395 t
ORIGIN      
        1 cctcactata cacaaaaaga cttagagtga ctgaaaaaca gttgtctaag tcttttttct
       61 tggtctggtc aagaacgttg ataagcttgt cctattgctc acccatcaac cacatgatgt
      121 catcagggct ttccttacag cctctagtaa cccaggtttt aagcactcgg aaaaatcctc
      181 ccacaataaa ttgcaggtga aaatcatcgg tcatgtcccc cagtctttct ttgaaatagc
      241 gatccaagac ctcctcgagc aagtagtcca aatggttggc tgtcaataag cgaatcttat
      301 cctgttgctc ataccaaaag tcaaaaaatt gccgtaaagc tagtaagagg tgagcatctg
      361 accaatccga caagtcaatc tgccgctcgg tcaaccaggc ttgcaattcc aagttgaagg
      421 accgttcgag aacctcttcc ttattagaaa agttcctata aaaagtcact cgaccgatac
      481 cggctcgctc caccaactca gacacactaa tcttttcaaa ggatttgtct tctagcaact
      541 cccacagagc ctccacgaca ctctccacaa ataacgactc tttccgcttc actctttcca
      601 tgcgaaacac ttcctttcct ttgtttcctt ttgggcaaat agcagagctg ggactagttt
      661 tcccactgtt catctgctat actaataaaa aaacgaaaca cctgtttcta aaaaatatac
      721 cataaaggac agaaaaaaga aagtatgaaa aaagtttgga aaatagtatc agctgtagta
      781 gtcgccttag ctttgcttgg ttttattgcc tataaaatga cctttggttg gtccgctcca
      841 gagcttgttc atcaaacccc acaagtgaat gaatggcacc gcctcagtcc cgaaggggtt
      901 gtagattctc aaggcaatca ggcacacggc ctgcttcgta tcggtaaaga gaagaataag
      961 gtgatggtct atttctttgg tggtggtgtg agtatcaatg aagagactgc tagtggaggg
     1021 actcaatatt atgcgaccac aactggccat caagattatg tcgcaacttg gggaattgga
     1081 agtccgcagg aagacaatcc atttaaggac tggactatga ttgtgcttcc gtatgggaca
     1141 ggagattttc atgctggcac acagaatttt tcatatgtag acgatcacgg aaaagagcaa
     1201 gtagtccatc accaaggtta ttccaatctg atgagtattt tagcagcagc taaaccgcac
     1261 gttggcaatc ccgatacact tctggtgact ggattttcag ctggcggatt tgcgacctca
     1321 ctgctagcgg atgatgtcat ttctcatttt ccaacagcga aaaatgtcac cgttgcagtg
     1381 gacagttcct ttttgagaca tgataactgg aaaagtattg cggaaaatgt ctggaaaacg
     1441 ccgacttcta ttagtgaccg cctgcattca gataatattg ttttagatag cttagtagcc
     1501 ctccatgaga aacgcgggga tagtgttaag atattgtttg atatttccta tcgagatgga
     1561 attcttcagc aatatcaagc ctatattgac caagggaaac tagcagatgc aacagaagag
     1621 agcagtgagc actttcaaaa agaacttaaa aaaatgattc aagaactaca atctcagatt
     1681 gatggcgtgg gtatttttgt ctggaattac gggcaagatg aaaaaactac cgctactcag
     1741 cacaccacca ttaaattctc aacattcttt acccctatgt ctcaagacaa gagtgtggca
     1801 gaatggctgg atgatgcggt taacggagag gtaaagagtt acgggttaga actattagat
     1861 taggagaata gcttgaaaaa atttaaaaaa atcatcttat ggatccttgg gattgtagct
     1921 agtctcggta tcattgctta tgtgtcggtt accaatcatc cgcagttgat ggtcggtgtc
     1981 attcaatcgt ttatgtacaa ggaaagttca ccgaactctt acagtcctct ttatgccccc
     2041 attgatggtc tgaaagagaa tggtcagtat ttgaaaagtg agattgccta tagcaaggac
     2101 tatcctaaca gctttttaga tattacctat ccagaccaaa attttgaagt tgaccgtcca
     2161 accctcttct atttccacgg tggtggattc tttggaggga gtaaaaatat gggtgaccca
     2221 ctggctgcca gccaagcgac ctatctcatt gacgatatcg tgtcaaaagg ttacaacgtt
     2281 gttaatgttg actatgctct tgttccagac tatcattttc caacgcctgt gattcagatg
     2341 aatcaggcca ttgcctacat aaaggaacac gctgaagaat accatttgaa catggataat
     2401 gttgtcttga tgggttcatc agcaggtgcc atcatggtag cgcaatatgg cagtgtctta
     2461 gccaatcagg agtacgctca gctattgaac attgaaccaa gtattgcaaa agaacatgtc
     2521 aaggctttgg tcatcgatga cgctccctta gattacgcta aatttagctt aagcacgaag
     2581 atcttggttg gaaattatgt ttcagaaacc atttatctaa gtgaggaaga aatcaatgcc
     2641 tataacccga tttcacatgt gaacaaggac tacccagcta gtttccttct gggaagcgag
     2701 tatcgaacag atatggtatc gctcaacaag gccttgaagc aagcgggagt tgaaaatgaa
     2761 ttggtcgatc ctttggcaga agaagggctt gaaaagccac atggttttgt ggcgaatttg
     2821 cgaaccgacc cggtgtctgc caaagcattt gagcggatga tgacttttat agacgataga
     2881 accaaggaat agtcggagta ttgataagtt ggaaactgat ggggatttgt ccaatcaatc
     2941 tgccgctctg acaaccatgt ttgtactcag aaagtctacg ccgaaaaatt ccaagtgaga
     3001 acaataagtc ccagctccac catttcccaa aagtccgtta taaaatcgtt gaaatacctg
     3061 tcaattgtgt tataatgaag agtatgcaat aaaattttaa ggagaatgac agaatgtctg
     3121 tatcatttga agcaaaagaa acaaaccgcg gcgttttgac tttcacaatc ggtcaagatg
     3181 ctatcaaacc agaattggac cgcgttttca acaaagttaa gaaagatatc aatcttccag
     3241 gtttccgtaa aggtcacttg ccacgtgccg ttttcaacca aaaatttggt gaagaagcac
     3301 tttaccaaga tgtagtaaac gctcttttac cagcagctta tgaagcagct gttgcagaag
     3361 ctggtcttga agtagttgca caaccaaaaa tcgacgttgt gtctatggaa aaaggtcaag
     3421 actggacaat cactgcggaa gttgtgacaa aacctgaagt aaaattgggt gactacaaaa
     3481 acttggcagt ttcagtagaa gcaactaaag aagtatctga cgaagaagta gatgcaaaaa
     3541 tcgaacgtga acgcaacaac ttggctgaat tggtcatcaa agaaggtcca gcagctgaag
     3601 gcgatacagt tgttatcgac tttgtaggtt caatcgacgg cgttgaattt gacggtggta
     3661 aaggcgagaa cttctcgctt ggacttggtt caggtcaatt catcccaggt tttgaagacc
     3721 aattggtagg tcacgcagct ggtgaagaag taaatgttga agtgactttc ccagaagact
     3781 accaagcagc tgaccttgct ggtaaaccag ccctcttcgt gacaaaaatc catgaagtaa
     3841 aagcaaaaga agttccagct ttggatgacg aattggcaaa agacatcgat gaagaagtgg
     3901 aaacacttga tgagttgaaa gctaagtacc gcaaagaatt ggaagcagca aaagaagttg
     3961 cctttgacga tgcagttgaa tcagcagctc ttgaattggc tgtagaaaac gctgaaatcg
     4021 ttgaattgcc agaagaaatg atccacgaag aagttcaccg tgcgatcaat gaattcttgg
     4081 gtggtatgca acaacaaggt atctcaccag atatgtactt ccaaatcact ggtacaactc
     4141 gtgaagacct tcataaacaa tacgaagcag atgctgaaaa acgtactaag acaaacttgg
     4201 tagttgaagc agtagctaaa gcagaaggtt tcgaagcaac tgaagaagaa atcaacaaag
     4261 aaatcgaaga cttggcagca acttacaata tggaagttgc acaagttcgc actcttcttt
     4321 caccagacat gctcaaacac gacatcactg tgaagaaagc tgtagaagtg atcacaagca
     4381 ctgcaactgt aaaataatgc aaattggaaa ctcgacttgg tcgggttttc tttttgtttt
     4441 ttgagaaatt aggtaaatta gtatatattt ttaaaaaaat acttgactgg ttaatattct
     4501 tgtgatatag ttaactggtt aacaaaggag gtagttatgt taaagaaagt gataagaggc
     4561 tgttttgttg ctttattcgg ttttgtttta gcagcttgct cggctcagaa ggaagcgagt
     4621 caagtacagc caggaatgaa aatagtcacc tcattttacc cgatttattc actggttaag
     4681 gaagtgtcag ggaataaaaa tgatgttcga atgattggct caagacaggg catacactct
     4741 tatgaaccat cggctgcgga cataaaggcc atatacgatg cagatgtttt tatctatcat
     4801 tcgcgaattt tggaatcctg ggcaggacgt ttggaaccta atttgcaagg ttcatctgtc
     4861 aaggttttgg aggcttcgac aaatttaccg ctgacaaagg ttccagggtt agaagacatg
     4921 gaagctggtc aagggattga tgaagctagt ttatatgatc cccacacatg gctggatcca
     4981 gttttggttg gtcaggaagc tgttgcgatt ggtgaacttt tagcagaaag tgatcctaag
     5041 aatgcggatt attatcgtca aaatgccgca actttagagg aaaaggcgca aaagttggcg
     5101 gacaaatata ttccaatctt tgcgaaggcc agttcaaaaa ccttcgtgac tcaacacaca
     5161 gctttctctt acactgcaca acgcttcggg ttgaagcagt tggggatagc aggggtgtct
     5221 gaggaagaac ctagcccaag gcagttggca gagattaaag agtttgtcga tacttacaag
     5281 gtacaaacga tttttaccga aaagggaacg tcggataaat tagctaaggc tctggcaact
     5341 tcgacaggtg tggacttaaa ggtcttggat cctctagaag cagaccctga aaataacttg
     5401 acctatttag aaaacttaga gcaggtttta gaaactcttg ctcaagaatt gagataataa
     5461 tcacgtaaag gagaaaaaat gaagaaaaaa gcagttgttg gctccgtagc cgcccttgtt
     5521 ttagggatga gtctctgtag ctatcagctt ggacgtttcc aagcgatgga agagcaaaaa
     5581 aatcgtgtgt cctatattga agatagtcaa agtgcacaaa ctaccgttgc tgaacaatta
     5641 acacctgatc aagtttctgc caaggaaaat attgacgctg agcagatagt cgttaaaatt
     5701 actgatcaag gctatgtgac atcacacggt gaccatttcc actactataa tggcaaagtc
     5761 ccttttgatg cgatttttag tgaagagttg gtcatgaagg acccaaacta tgtcttacaa
     5821 gacagtcaca tcatcaatga agtccaggat ggctacgtca taaaagttga tgggaaatac
     5881 tatctctatc taaaagaccc tagcaaacat aaaaatgttc gtagcaaaga agaagtggag
     5941 cggcaaaaag gaatctcttc tgctgacagc aaaaatcagg cagcaggaaa tagtaaagat
     6001 ggccgctaca gaacagacga tggctatgtc tttaatccga cagatgttat tgaagacacg
     6061 ggagatggtt tcatcgttcc gcacggcgac catttccact ttattcctaa aaaagattta
     6121 tcagctgccg aattgaaggc tgctcaagat tactggaatc aaaaaggaag tgtgagctcg
     6181 gctagtggta gtcaatatgg cgatagaaat aatagagctc aacagacaac aattagtgcg
     6241 gggcaaggtc aggatttggc tagtttattg gctcaattgg atgcaacacc cctatctcaa
     6301 cgccatgtag aagcggatgg attggtattt gacccaagaa cgattacgaa gaaaaccgca
     6361 gcaggtgtca tcgttccaca cggcgatcat taccacttta ttccatacag ccagatgtct
     6421 cctctagaag agaagatttc tcgaatgatt ggtgtaaatg gagctggtgt ttcttctggc
     6481 gcacaagcaa gtcactccca acatacacca acacaaccaa atcgtccagt aacaccaatc
     6541 ggaacggtta caacgcaacc ggtatcgcct acacaaccga agcggtcaac agggaaagtg
     6601 gtttcctata tgggacgtca aattcctgct tacggaaaag gattagatgg taaggcatat
     6661 tttacaagtg atggatacac ctttagcaaa gactctatta cctcagttga tgatcaaggg
     6721 ctgatagcta gtcatggaga tcatttccat tatgttggtt ttggcgaact tgaagatttt
     6781 gaaatcaagc aagtagagga atgggttaat gagaaggcgg gcaaacaagt gccaccgaaa
     6841 acttctgaac aagtaggaaa cgatgctaac cccacaacac caagtcaagg gaatgattca
     6901 aaacctgtaa aaccaattca agaagaaaac cgccctgcat ttgaatacaa acaagtaacg
     6961 gctaaacgta aattggctgg aaaagttgtt tatgaaatgg aagtaggtgg aaaaacttat
     7021 acgtatggtc gtgacgaact agatttgatg aagatctctt ttgctgagtt gaccttggca
     7081 gaaaaagata agcagtatat ctttgatatt gcaccgcttg cagaaggaga tcttaagcca
     7141 gccatgttgg tcggtatgga tcaaattccg atgaagggag cgaatgcaac ctatgatact
     7201 ggacaatcct ttattattcc acacattgat cacatccatg tcctacctta cacatggttg
     7261 agtaaggaac aaattgcaac gatccgctat atcatgcaac atcctgaaat tcgtccatct
     7321 gcttggacta caagtggaca tggtgatgga gaagcaacga atcttgttcc cccaattcta
     7381 aatgcaacac ctaaagccaa ccgcttaggc ttgaaaaatt ggcaaatcat tcacacagca
     7441 gaagaagtca tggatgcgcg tgcaaaaggg aaatttgcga caaatgatgg ctatatcttc
     7501 tcggcggaag acgtactaga tccagcaagt tttgtcttta gtcaagcgtt cagtctacca
     7561 agagcgacag gaggttctct acgttcaatt tccaagaaag atttatctaa agaagaattg
     7621 gaagctgtac aaactcttct tgataaacga gatgctgaag aattggcgaa aaatgtcaca
     7681 ccaattgaga aacgtgcagg tttgaaaaat tggcaaattg ttcactcagc agaagagttg
     7741 gcagaagcta aggcaacagg aaaatataca acaaaagatg gctatatttt tgacccagca
     7801 gacctattag atcccaaagt gaaaataggt acggataact atcgcatccc acgtgtgatt
     7861 acagatggtt accgtcggat taacaagagt gatttgaatt acttaagcga gctgatccca
     7921 gcagaggcta tggtggctca acgtgagaaa tctaattcta gttcaccgtc aacacctgca
     7981 ccaactgaaa taggagcaag tgcaggcgag acaacaacgc cagaacagcc gcaagttgcc
     8041 aaagaaacag cagaggaaat ttataaccga gtggaagcga agaaagtcgt tcctttcgaa
     8101 gcactgacct acaatgctgg ctatgcgacc gaagtacgca acgggactct ggtaattccg
     8161 catcaagatc actatcacta tgtatccttt aaatggtttg accaaggtag tgcaagaagt
     8221 cctgaagggt atagtttaga agatttccta gcaacggtta aatactacat gactaatcca
     8281 caagaacgcc cggtttcaga cgatggctgg ggagtattta caccaaatac agcatctgaa
     8341 tcaacagaag aaatagagac ggaagaaagt gatgaagaaa ttgacgagtt tacagaagaa
     8401 ttaaaacgaa gagcagaaga gtttggcatg gacttcaaaa cctttgaaca aagtctggtc
     8461 acactctcag accgttacaa agtttctttt gaagctttcg aatatgatgg aacaagcaaa
     8521 gttgttcgac ttgtagataa ggatggggtc aaacggacca tctcccttcc aagtttagaa
     8581 gaacaagtat agtaaacaaa atacctgtag cgctgagctc tgcaggtatt tttttacaga
     8641 aaaacgataa agattatctt tgactatttg ccttttttag cgtaaaatag aaaggaaaga
     8701 caaaaaagga gaacagcctt ggaacttaac gtatttgcag gacaagaaaa aagcgaactt
     8761 tccatgattg aagtagcccg tgctattttg gaagaacgtg gacgtgacaa cgaaatgtat
     8821 ttcaacgact tggtcaatga aattcaaaac taccttgaaa aatcaaacag cgagattcgc
     8881 gcagccctcc caaccttcta ttctgatttg aatgtggatg gaagcttcat tccacttggc
     8941 gaaaacaaat ggggcttacg ttcttggtac gcaatcgatg agattgatga agaagtgatc
     9001 actcttgaag aagatgatga agatgcacca aaacgcaaga agaaacgtgt caatgccttc
     9061 atggacggtg atgatgatgc gattgactat ggacatgacg atccagaaga tgaggacaac
     9121 tatccgggta gtgcatcatc agaatacgat gatgaaaatc cagatgacga aaaagatgaa
     9181 gttgagtcct atgattcaga aatcaacgaa attatcccag atgacgaatt ggacgaagag
     9241 gatgttgatt taggtgaaga tgacgacgag tattcagatg aagaggtcgt cgacgaataa
     9301 gaattatatc cccctagatt cttaaaaata
//
LOCUS       DASFQS010000083         9120 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.085, whole genome shotgun sequence.
ACCESSION   DASFQS010000083 DASFQS010000000
VERSION     DASFQS010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9120
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.085"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            233..2257
                     /locus_tag="U1041_001738"
     CDS             233..2257
                     /locus_tag="U1041_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HEM4768832.1"
                     /translation="MKKNIRLKSSVLALVAGFSVITTQAVLADELAVQIMGVNDFHGA
                     LDTTGTARLEGETVRNAGTAALLDAYMDDSQAEFEETAAETETPAESIRVQAGDMVGA
                     SPSNSGLLQDEPTVKAFNKMDVEYGTLGNHEFDEGLDEYNRIMTGEAPKEGQFNEIVD
                     NYTHEVAKQEIVIANVIDKETGEIPYGWKPYAIKTIPVNDKEANIGFIGVVTTEIPNL
                     VLKKNYEQYTFLNEAETIAKYARELAEKGVNAIVVLAHVPATSKDGVAAGEAADMIAK
                     LNEIYPEHSVDLVFAGHNHVYTNGTTGKTLIVQATSQGKAYADVRAVYDTDIADFKEV
                     PTAKIIAVAPGQKTPSPEIQAIVDEANTIVKKVTEQKIGTASQATDISREVNEFKESA
                     VGNLVTSAQLAIAKKSGYDVDFAMTNNGGIRADLKVQEDGTVTWGAAQAVQPFGNILQ
                     VVQMTGEQIYTALNQQYDEGEKYFLQMSGIKYIYTKADNPTEENPYKVVKAFKEDGTE
                     IVPTETYTLVINDFLFGGGDGFSVFKEAKLIGAINPDTEVFVEYLTDLEKAGQTISAT
                     ITGRKAFVEEYVEEPKAEEKGDTAGTTTDTKTPEKANDGGGSVANQKATEQPAPSGSV
                     APISNKKAEKASGNQTLPNTGQEALGSLLISLGGLVSLGMAVSMRRKEGE"
     gene            2452..2523
                     /locus_tag="U1041_001739"
     tRNA            2452..2523
                     /locus_tag="U1041_001739"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2485..2487,aa:Arg,seq:cct)
     gene            complement(2567..3655)
                     /locus_tag="U1041_001740"
     CDS             complement(2567..3655)
                     /locus_tag="U1041_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4768833.1"
                     /translation="MAYFRKRDNGWEYRISYKAPDGSYKQKSKSGFRTKSEAVQAASQ
                     AEIELSNGIVEDKNITLAEYFEKWMLIHKKPHVGPETFGKYEYTLKLITIYFHETKLS
                     KINATSYQNIINELAKCYVKDSVKRFNSHIRAAIKVAIHQGILKKDFTEIVKIFSDVE
                     SKKEEDKYLELDEYEQLITDYRKTIKYQSHFFLYTIGKTGLRFSEAAGITEPIVDREN
                     MCLRIRRTYKVYGKKKGWGPTKNPQSERDVPFDSEWLKAYDEYMKVGYIDNPDKRLFT
                     KLTGTGENKILKKKTRQTFNVHGLRHTYVSWLIYHDVDVVTIAKLVGHKDATETLKTY
                     SHLFKAKQEESFDKVRNLMEKFGADLGQ"
     gene            complement(3926..4573)
                     /locus_tag="U1041_001741"
     CDS             complement(3926..4573)
                     /locus_tag="U1041_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001031296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEM4768834.1"
                     /translation="MKENPYFENAKQNYIKVEKLYKLGKAKHTSTKYRFLAPAVKRQS
                     EQYLYEAENPKRKYWKFNRGSLVFVEFGVNVGGELSNNHWAIVLDKTDSPYKKTLTVI
                     PITSKENDNTVPLQEIIGQQSFKYIDKEFAKLEQKITEENTSSEEFQLTISNLKEVID
                     YYGKYLKQSFAKCDSLQTISKDRILKKNPLDPVGKIKVSPETLDAINAKVKELYF"
     gene            complement(4644..5489)
                     /gene="dinD"
                     /locus_tag="U1041_001742"
     CDS             complement(4644..5489)
                     /gene="dinD"
                     /locus_tag="U1041_001742"
                     /inference="COORDINATES: protein motif:HMM:NF008573.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HEM4768835.1"
                     /translation="MEQSKIYRTKEKFDSIVNQTENEFIDYWYARDLMPLLGYERWEN
                     FHKAIQRAMNSVETSDTKVSDHFREVTKMITIAKGGQRPVTDYMLTRYACYLIAINGD
                     TNKEEIAFAQSYFAVQTRKQELIEERLHYIERTEARGKLKESEKRLSQNIYERGVDDK
                     GFGRIRSKGDTALFGGHSTQEMKERLGVKSNRPLADFLPTLTIAAKNLATEMTNYNVE
                     ENNLHGEKSITDEHVLNNTTIRSMLEQRGIKPEELPPAEDLKKLERKVKQQNKKLIKE
                     AGKLP"
     gene            complement(5558..5866)
                     /locus_tag="U1041_001743"
     CDS             complement(5558..5866)
                     /locus_tag="U1041_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001823580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768836.1"
                     /translation="MPQETYTKSEIDLKFDKISTDIQHSSEKSDLKFDALTKQVDLKF
                     DNFENKLENLFANLKVELANEKIESLEQARKDKRELILWSIGTAVAILGILIPLILNK
                     "
     gene            complement(5980..6402)
                     /locus_tag="U1041_001744"
     CDS             complement(5980..6402)
                     /locus_tag="U1041_001744"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768837.1"
                     /translation="MKKEFIEKIQDVKLYHSDDANTPLGVAYDISKFPVDFGVTFKVF
                     FFNLVPNKDYVIVLYYIAGNKPEELHLLNNVTLNVQSGDMIKYQDGYGLAFGTFSTIF
                     PIDQEGELMIVLELRALDNMERILDTYSTYITFEEKAK"
     gene            complement(6481..7230)
                     /locus_tag="U1041_001745"
     CDS             complement(6481..7230)
                     /locus_tag="U1041_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011527535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4768838.1"
                     /translation="MDTQIAFPAMVKQYRTASSLTMEQLAEKIGKTKSTISKWEKGTR
                     SPKIQEIEELANFFGIDPQIMMFGKSYTPTTAPNSLVEQISDKVVYLDQKLKEPRHSA
                     WISHGERLLSEQEKENTVNELQATYHTYNYYDQPASAGTGQYLNDVKVETIELPIEVD
                     ADFVVPIYGDSMEPEYHSGDYIFVKLSVDLSDGDIGVFAYNGDAYIKQLCITDQGAYL
                     HSLNPDYDNIPITADTDFRTIGEVVEVYRER"
     gene            7616..7780
                     /locus_tag="U1041_001746"
     CDS             7616..7780
                     /locus_tag="U1041_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017650606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768839.1"
                     /translation="MSWKKILFGSYEKTFVSQDGRAKTTISIKGGLLLNLLALVGLVG
                     LIWWLIGLFT"
     gene            7797..8003
                     /locus_tag="U1041_001747"
     CDS             7797..8003
                     /locus_tag="U1041_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001157160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768840.1"
                     /translation="MTETAFEKLLNDSGMKRNVIAERMGLTRSGFYRKQKKPKERFDG
                     DEMAKLAEVIGVDPQKVLAAILIS"
     gene            8205..8534
                     /locus_tag="U1041_001748"
     CDS             8205..8534
                     /locus_tag="U1041_001748"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768841.1"
                     /translation="MKELIDFANFRIYDDGNEIHLLAPNKEVFDKTPAHEHGISFEIF
                     DENGLLDYDKTVEKIEFHNKIRNRIKNDPRGQAGIVADVFGVDMGEAEEIRRNLIEIG
                     KKKHGLS"
     gene            8714..9061
                     /locus_tag="U1041_001749"
     CDS             8714..9061
                     /locus_tag="U1041_001749"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768842.1"
                     /translation="MPASGAVDDGLCAVGAGGEVERGVGRYSSAIYGKEKGMNELERT
                     ALNEILRTVTYIAERVDRLGEQLYPHLTETDKKEVLALINDALSKGRGISDNNLDGVK
                     FQSNTPQGIEGVR"
BASE COUNT         2601 a         1633 c         1946 g         2940 t
ORIGIN      
        1 tttagttgtg aggagtattt tggagagaat tgtgtaaggg aagagggatg atttttcgta
       61 ttatggataa aaacaacaag atattttcag aaaaatgatg taaaagtaag aataaacgaa
      121 tatttttata attttttgtt acaaatgact gatttgatat tgaaaagccg taaaaaaagg
      181 attattatag atatgtcaat acgaaaaaaa tagaaggagc attgttttgc ttatgaaaaa
      241 gaatattcgg ttgaaaagca gtgtactagc tcttgtagct ggttttagtg tcattacaac
      301 acaggctgtt ttagcagatg aattagctgt ccaaattatg ggagttaatg atttccatgg
      361 tgcgcttgat acgacaggga cagcgcgatt ggagggggaa acagttcgga atgcaggaac
      421 tgcagccttg cttgatgctt acatggatga ttcgcaagca gaatttgaag aaacagcagc
      481 agaaacagaa acacctgcag agtctatccg tgttcaagcc ggagatatgg ttggtgcaag
      541 tccatcgaat tctggacttt tacaagatga accaactgta aaagccttta ataaaatgga
      601 tgttgaatac ggtactttgg ggaaccatga atttgatgag ggacttgatg agtataaccg
      661 tatcatgact ggcgaagctc caaaagaagg ccagtttaat gagattgtag ataattatac
      721 tcatgaagta gccaaacagg agattgttat cgccaacgtt attgacaaag agacgggtga
      781 aattccgtat ggctggaaac cgtatgctat taagactatt cctgtaaatg ataaagaagc
      841 aaatattggc tttattggtg tagttacgac agaaattcct aatcttgttt tgaagaaaaa
      901 ctatgagcag tacacttttt tgaatgaggc agagacgatt gcaaaatatg cgcgtgagtt
      961 agctgaaaag ggtgtaaatg cgatagttgt actggctcac gtcccagcta caagcaagga
     1021 tggtgtggct gctggtgaag ctgcagatat gattgctaag ctaaatgaaa tctatcctga
     1081 acactcagtt gaccttgtgt ttgctggtca caaccatgtc tatacaaacg gtacaacagg
     1141 caaaaccttg attgtacaag ctacctcaca aggtaaggct tatgcagatg ttagggctgt
     1201 ttatgataca gatattgccg actttaaaga agttccgact gcgaaaatta ttgcagtggc
     1261 accagggcag aaaacaccaa gtccagaaat tcaggcgatt gtagacgaag caaataccat
     1321 cgttaaaaaa gtaacagagc aaaaaattgg tacggctagt caagcgacag atatttctcg
     1381 cgaggtaaat gaatttaaag aaagtgctgt gggtaattta gtaacatcgg ctcaattagc
     1441 tattgctaag aaatcaggtt atgatgttga ctttgcaatg accaacaatg gcgggattcg
     1501 ggcagatttg aaggtccaag aggatggaac agttacttgg ggagcagcac aagctgttca
     1561 accatttggg aatatcctac aagtcgttca aatgacaggt gagcagattt atacagcctt
     1621 aaatcaacaa tacgatgaag gcgaaaaata tttccttcaa atgtctggaa ttaaatatat
     1681 ctacacgaaa gcagataatc caacggaaga aaatccttac aaggttgtta aagccttcaa
     1741 agaagatgga acagagattg ttccgacaga aacctataca cttgtcatca atgacttcct
     1801 atttggtggt ggggatggct tctcggtttt caaagaagct aaactgattg gtgctatcaa
     1861 tccagacaca gaagtatttg ttgagtattt gactgattta gaaaaagcag gtcaaaccat
     1921 tagtgcaact attacaggca gaaaagcatt tgtagaggag tacgtagaag aaccaaaagc
     1981 agaagaaaaa ggagatactg ctgggacaac taccgatacg aaaacacctg aaaaagcaaa
     2041 cgacggtggc ggtagtgtag caaatcagaa agcaaccgag caaccggcac catctggaag
     2101 tgtggctcct atttcaaata agaaagctga aaaagcatca gggaatcaaa cacttccaaa
     2161 taccggtcaa gaagccctag gctcccttct tattagcttg ggtggcttag tttcactcgg
     2221 aatggctgtc tcaatgagac gtaaggaagg ggaataggaa tcaagcataa aaacgacaaa
     2281 ctttcgaagt atgttttagg agcgcttctt ttgagactat catgagagaa atacataaaa
     2341 acaattgtgt ttcatcttag agtaggttct gctttttgta aaaattttaa aaaacttata
     2401 taaccttgct cttgcaatct gctctcttct ggtgtacaat agagaagcag acttccctta
     2461 gttaaatgga tataacaaat tcctcctaag aattagttgc aggttcgatt cctgcagggg
     2521 agatgaaaat acaacaaaaa cccttgatac acaagggttt ttaactttat tgccccaaat
     2581 ccgccccaaa tttttccatt aaatttctga ctttgtcgaa tgattcttct tgttttgcct
     2641 tgaataagtg cgaataagtt tttaaagttt cagttgcatc cttgtgccct actaacttgg
     2701 caatggtcac aacgtccacg tcatgataga tcagccagct aacgtaggta tgacgtaagc
     2761 cgtgtacatt aaatgtttga cgtgtctttt tctttaaaat tttattttcg ccagtccctg
     2821 tcaatttggt aaacaatctt ttatctggat tgtctatata tccaactttc atgtactcgt
     2881 cgtatgcttt cagccactca ctatcaaatg gcacatctcg ttctgattgc ggattcttag
     2941 taggtcccca acctttcttc tttccgtaaa ccttgtaagt cctgcggatt cgtaaacaca
     3001 tattttcgcg gtcaacgata ggctctgtaa tgcctgctgc ttccgagaaa cgaagtccgg
     3061 tttttccgat agtgtacagg aagaagtggg actggtactt aattgtcttt cgataatctg
     3121 tgattaattg ttcatattca tctagttcca ggtacttatc ctcctctttc ttggattcga
     3181 catcggagaa aatcttgaca atttcggtaa aatctttttt taaaattccc tggtggatag
     3241 caactttaat tgctgctctt atatgcgaat tgaacctttt gacactatct ttcacataac
     3301 attttgccag ttcgtttata atgttttgat atgaagtggc gtttattttc gagagttttg
     3361 tttcgtgaaa gtatatagta atcagtttaa gggtgtattc atacttacca aacgtttctg
     3421 gtccgacatg aggcttcttg tggataagca tccatttttc aaagtattcc gcaagggtaa
     3481 tgttcttatc ctcgacaatg ccattggaca gctcaatttc agcttgtgat gctgcttgaa
     3541 cagcttcaga cttagtccta aacccagact ttgatttctg cttatatgag ccgtctggtg
     3601 ctttatatga gatacggtat tcccatccgt tatccctttt tctaaaatat gccattgatt
     3661 taccctttct tttttgataa aatgggtata gtaaagaggc ctactgcaaa gcaggttttt
     3721 actatacgga attgccctac actcaagctt gccggcggag agtgtgggga tttttttgtt
     3781 tttttgtgaa atagcaaaaa agcagccatg aaaaacatga ctgccgtacg gtatgggact
     3841 aaatcccgaa tgtaaacttt atgaggcttt acctctaata cagtcatatt ttatactttt
     3901 ttttgatttt tgtaaagtat tttggttaga aatacaattc tttaactttt gcgttgatgg
     3961 cgtcaagagt ttctggtgat acttttatct ttcctacagg gtctaagggg ttctttttga
     4021 gtatcctatc tttgctaatg gtttgtaggc tgtcgcattt tgcgaatgat tgcttgaggt
     4081 atttaccata gtagtcgatg acttctttta gatttgaaat ggtgagttgg aactcctcac
     4141 ttgaagtgtt ttcctcagtt atcttctgtt ctagtttagc aaattctttg tctatgtact
     4201 taaatgattg ttgaccaatt atttcttgta acggaacagt gttgtcattt tctttggaag
     4261 tgattgggat gactgtcaat gtctttttgt acggtgaatc tgttttatca agtactatag
     4321 cccaatgatt atttgacaac tctccaccaa cgtttactcc aaattcaaca aagactagtg
     4381 aaccacgatt aaacttccaa tatttccttt ttggattttc tgcctcgtaa agatactgct
     4441 ctgattgtct tttgacagca ggggctagga agcggtattt ggtggaggtg tgtttcgcct
     4501 tgccaagttt gtataatttt tctactttga tgtaattttg tttggcattc tcaaagtatg
     4561 gattttcttt catacaaatc tccttcctac ttctccctat acacttccac gacctcaccg
     4621 atggttcgga gtgtgttttt tgtttaaggt aatttccctg cttctttgat aagttttttg
     4681 ttttgttgtt ttactttgcg ttctaacttt ttcaagtctt ctgctggagg gagttcttct
     4741 ggtttgatac cacgttgttc aagcatgctt cggatagttg tattattcaa aacgtgttca
     4801 tctgtgatgg atttttcgcc atggaggttg ttttcttcaa cattgtaatt tgtcatctcg
     4861 gtcgctagat tttttgctgc gatggtcaga gttggtaaga agtcagctag tggacggttg
     4921 cttttgacac caagacgttc tttcatttcc tgcgtgctat gtcctccaaa tagtgccgtg
     4981 tcgccctttg accgaatacg tccaaatcct ttgtcgtcaa cacctctttc ataaatgttt
     5041 tgtgataggc gtttttcaga ttctttgagt ttacctcgag cttctgtgcg ttcaatatag
     5101 tggagtcgtt cctcaatcaa ttcttgcttt ctggtctgga ctgcaaaata ggactgagca
     5161 aaggcaatct cttctttgtt agtgtctccg tttatggcaa taaggtaaca agcgtaacga
     5221 gtaagcatat aatcggttac tggacgttgt ccgcccttgg ctatggttat cattttcgtg
     5281 acctcacgaa aatgatctga caccttggtg tcactggttt ctacggagtt catcgctctt
     5341 tggatagctt tatgaaaatt ctcccaacgt tcgtaaccaa gcaggggcat aaggtcacgg
     5401 gcataccagt aatcaatgaa ttcattttcg gtttgattga ctatgctatc gaatttttct
     5461 ttggttctat aaatttttga ttgttccatg tttcctccct acctctccct atacacctcc
     5521 acaacctcgc cgatggtaag gagagtgtgg ggatttttta tttgttcaaa attaaaggaa
     5581 tgagtattcc taaaatagca actgctgttc ctatagacca taaaataagc tctcgcttat
     5641 ctttacgagc ttgttctaga gattctattt tttcattggc taactcaact ttaagattag
     5701 caaataaatt ctctaactta ttttcaaaat tatcaaattt taaatctact tgtttggtca
     5761 atgcatcaaa ttttaaatcc gatttttccg agctatgctg aatatcagtg ctgattttat
     5821 cgaacttcaa atcaatttca gattttgtgt atgtttcttg cggcataata gaatcctcct
     5881 gttgttttct tgattctatt atatcatgtg tagtctgtac tggtacagat aagttgttcg
     5941 gattggttat tttcattggg attacttttt cgagtgtcat tatttcgctt tctcctcgaa
     6001 cgtgatgtat gtactatagg tatccaagat tctttccata ttgtctaaag ctcgtaattc
     6061 aagaactatc attaactctc cttcctgatc gattggaaag attgttgaga aggttccgaa
     6121 tgcaagccca tagccgtctt ggtattttat catgtcgccg gactggacgt tgagagtgac
     6181 attgttcagc aggtgcaatt cttcaggttt gttgccagca atgtaatata gtacaatcac
     6241 gtagtcttta ttgggtacga ggttaaaaaa gaatacttta aaagttaccc caaaatctac
     6301 tggaaatttt gatatatcgt aagcgacacc aagcggtgta ttagcatcat cgctatgata
     6361 cagtttcaca tcttgaattt tttcaataaa ttctttcttc atgacatttt tattccttgc
     6421 gttattgtca aatcaaatta ttaaactcct cgattaccat agtctcattg actgtggttt
     6481 ttacctctcc ctatacacct ctacgacttc tccaatggtt cggaagtcgg tgtctgctgt
     6541 gatggggatg ttgtcatagt ctgggttcag gctgtggagg taggcacctt ggtctgtgat
     6601 gcagagttgt ttgatatagg cgtcgccgtt ataggcaaat actccgatgt cgccgtctga
     6661 tagatctaca gatagtttga cgaatatata atcgcctgag tggtattctg gttccatgga
     6721 gtctccgtag atagggacaa cgaagtcagc gtccacttca ataggtaatt cgatagtctc
     6781 aacttttaca tcattcagat actgacctgt gccagcggaa gcgggttggt cgtaatagtt
     6841 gtaggtgtgg taggtggctt gcagttcgtt tactgtattt tctttttcct gttcgctcaa
     6901 caaacgttct ccgtggctta tccatgcgct gtgacgtggc tccttaagct tttggtctaa
     6961 atataccacc ttgtccgaaa tctgctctac gaggctgtta ggggctgtag tgggggtgta
     7021 ggatttacca aacatcataa tttgcggatc aattccaaag aaatttgcca attcttcaat
     7081 ttcctgtatt ttgggagaac gtgttccttt ttcccacttt gaaatggttg attttgtttt
     7141 tcctatcttt tctgctaact gttccatggt gagagagctt gctgttctgt attgtttaac
     7201 cattgcagga aaagcaattt gagtatccat actgtgtcct cctttttttc ttcattatat
     7261 aatcatgttt acattttgtc aacaaaaacg ataacaagat attttcaaaa aagttgactt
     7321 ttttaacaca aaagtgttga caaaaaggaa acaaagtcgt atactataat caaggttaag
     7381 gaattaaccc caccaaaact aaaaaaaaca ggaggtacag ccaatggcaa gacacgaaaa
     7441 aaagcctaaa cgcagagaaa tcgaatttga cattcaattc ttctggttta gacttcgagt
     7501 aaaatactta atcgagtggt agcttgatta agtagggggg caggagcctc cctccctcgt
     7561 aagagggata ggtatagtgt accacattgg ctgtacttcc tgcaaggagt atcttatgag
     7621 ttggaaaaaa attctctttg gtagttatga aaagaccttt gtcagtcagg atggcagggc
     7681 aaagacgact atctctatca agggtggatt gttgcttaat ctgttggcac tggtcgggct
     7741 ggttggcttg atttggtggc tgattggtct atttacatag aaaggagtga tggttattga
     7801 cagaaaccgc atttgaaaaa ctactcaacg atagcggtat gaaaagaaat gtcattgcag
     7861 aacgcatggg cttaactcgt tctggatttt acagaaaaca gaaaaagcct aaagagcgtt
     7921 ttgatggtga tgaaatggcc aaactagctg aggtaatcgg tgtagatcct cagaaggtct
     7981 tagcggccat tttaatttca taacgaagtt gacaaaaata acacaaacac accagctctg
     8041 ctatttagca ttgcacacta tcagttcttg attgtcacct agtacggtgt ccaacgcagc
     8101 tccttttccg ctttctgagt ttttattgcg ttggcggttt cgttcattga ctggtcatca
     8161 ccgtgctagc tgtcagtcaa ggactgaaaa gaaaggaaaa aattatgaaa gaacttattg
     8221 attttgcgaa ttttcgcatt tatgatgacg gcaatgaaat tcatctactt gctccaaata
     8281 aggaggtatt tgataaaact cctgcccatg aacacggtat cagttttgag atttttgatg
     8341 agaatggtct gctggactac gacaagactg ttgaaaagat tgaatttcac aataagatac
     8401 gcaacaggat aaagaatgac cctcgtggac aggctggaat tgttgctgat gttttcggtg
     8461 ttgatatggg agaagcggaa gaaattcgac gcaaccttat cgaaataggc aaaaagaaac
     8521 acggtttgtc ttaacaaaca caccagctct gctatttccc caatggtcag tctttggtca
     8581 aactttatac aatacttgta taaaaagttc ttgacttctt caagaacttt aactaacagg
     8641 tggaaggagg ggtgaccatg acgtctatac atgtgtcttt gtcggttgag atgaagaagc
     8701 ggttgggggt ggagtgccag cgtctggggc tgtcgatgac ggcttatgtg cggttggtgc
     8761 tggcggagaa gttgagagag gagtagggcg gtacagctct gctatttatg gaaaggagaa
     8821 ggggatgaac gaactagaaa gaacagccct caatgaaata ctgaggactg tgacatatat
     8881 tgctgaaagg gtggatagac ttggagaaca gttatatcca catcttacag aaacagataa
     8941 aaaagaggtg ctggcattga ttaacgatgc actttcgaaa ggaaggggta tctcagataa
     9001 taatcttgac ggtgtcaagt tccagtcaaa tactcctcaa gggatagaag gtgttagata
     9061 aacaacgttt ctaatttctt tagctctaga tgatattcgg gagaaatatg gctataagcc
//
LOCUS       DASFQS010000084         9044 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.086, whole genome shotgun sequence.
ACCESSION   DASFQS010000084 DASFQS010000000
VERSION     DASFQS010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9044
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.086"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            179..817
                     /locus_tag="U1041_001750"
     CDS             179..817
                     /locus_tag="U1041_001750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768843.1"
                     /translation="MYFYEKRGSYQVKCYRYDLTDEMRDKALDFAKKIILSDNQYSRL
                     LPEDVFLSNDIELKNKIEIQRTYMGKLGEIAFLKLLKDKNKVVDTSGMFTIYEGQRKT
                     DSYDFITDFSESVDVKTGFRYNHSRLLVNLEQFNSKPKNFYVAVRLNATDTNIDTKLV
                     DWFSVTHADILGFVEFDFLNEKCDIKNFGEGDAKFIPYNRLLGIDKLISRFK"
     gene            1015..1200
                     /locus_tag="U1041_001751"
     CDS             1015..1200
                     /locus_tag="U1041_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4768844.1"
                     /translation="MEKEKWISIEEAATYLSVKPVTIRNWIKHNMDMPAHKIGRKWAF
                     KCSELDNWVKSGKSTMD"
     gene            1230..2858
                     /locus_tag="U1041_001752"
     CDS             1230..2858
                     /locus_tag="U1041_001752"
                     /inference="COORDINATES: protein motif:HMM:NF014442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HEM4768845.1"
                     /translation="MLNRAFNIVNNFLAQKYSHSELLVLRSELNRIYYSEYKSDEYYD
                     NFFEIQDLLSTLNERESIRKTKGVYYTPNDVVSFIVTNSFKILSQNVDYFKLDNSINF
                     EVNFMEICFSKTVFDPTCGAGEFLIETLDYKYNLLERSIANPSIAEVHAVLQTIFGND
                     INPDSINITKLRIFLYILERYGIDSIIGISKILSQNFTVQDYLQQLTVSKESLCERRF
                     DVILGNPPYVEQSKSGLELERNYGNIYAHVLEKSSTQLKQNGVIGFIIPLSYVSTPRM
                     KSIRETLYKLIPTQVILNFSDRPDCLFTSVHQKLTIIFGRNTNSTVSIFTGNYTYWYK
                     NERDFLFQSSEVIENNFIEEKFIPKLGNNFDVSIYKNIKSQANALNSLFDGGDKSIYL
                     NMRAAFWIKAFLNKHKGSEYKIFSSSNVDNINYAMCLFNSSLFWWFWICISDCWHITQ
                     KELNGFRIPINFDTKIVKELANNLEMKLEETKLYVGTKQTEFEYKHRLCVEEIHKIDD
                     YINQLFGLSEAESDYIKSFAYKYRISGGRNVKNN"
     gene            2842..3948
                     /locus_tag="U1041_001753"
     CDS             2842..3948
                     /locus_tag="U1041_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEM4768846.1"
                     /translation="MLKIIDLFSGVGGLSLGFIQNGNKVKKAVEYDKTIANSYILNHP
                     GVDVIIDDIANIDNAGIFKEGDADVIVGGPPCQGFSMAGARIRNGFMDDPRNYLFKHY
                     FNIVKSVKPKVFIMENVKGIQTMQNGEIFAEILRIFSDAELLGGEPYQLFYKVVKATD
                     FGIPQKRERMIIIGTTVPNINYMDIWEDTIIQIRREIPTFFDSVTVRDAISNLCEPTD
                     SGVVTSTRSMTDYQMYLESRNSTLTNHSKTNHSTVAVERMKKVKSGENFTVLNERINS
                     VHSGSYGRLSWDEPAPTITTRFDTPSGGRFIHPIENRTLTPREAARIQSFPDDFVFYG
                     NKTSINKQIGNAVPPKISYFLSKLVENILKKGNI"
     gene            4212..5777
                     /locus_tag="U1041_001754"
     CDS             4212..5777
                     /locus_tag="U1041_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4768847.1"
                     /translation="MTSNSYNTAQISPTFYEIKELCDGNFEKIGLYKDIVQRQIEKMF
                     ISSSIDEEYKGIRKDFRLFPVMFLYKILIELGKATGDYSISINEYRYLVATSKKYEDY
                     LNTLILIMLSREDITVNSVLEKYRMKFDNRLIQALKQLQTLVIDNEKISIPVYQIENV
                     KNKVYQFEKLNVESVSDEKYLGFLASTQSLLESEFNPENQNDEITKTNNRKVGGENIL
                     FYGVPGSGKSHAIDSKYGKERMYRVVFHPDYMNTDFIGQILPTIKEDETISYEFKPGP
                     FTKVMRKAYEDSVNMYYLIIEEINRGNAPAIFGEIFQLLDRTDSGESKYSVVNYDISK
                     AIFDNENIPIKIPSNLTILATMNTSDQNVFTLDTAFQRRWTMKMILNDINKAEHKNVK
                     ISDTSVTWGLFNKVINELIISSNTSMLSSEDKRLGAYFISPSDLSRDDVEKRFSEKVV
                     KYLWDDAFKFSRDKLFNTTSYKSLEDIIVGFLSKKADERFIIFKDEIRELLSSESADV
                     MEITNNEIEDQNP"
     gene            5791..7080
                     /locus_tag="U1041_001755"
     CDS             5791..7080
                     /locus_tag="U1041_001755"
                     /inference="COORDINATES: protein motif:HMM:NF021104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LlaJI family restriction endonuclease"
                     /protein_id="HEM4768848.1"
                     /translation="MGNFEDLQIDKPLYEYCQNATNKEGDTFVGIRSEIVDEKHNLTI
                     YFPLGFEISKDETLVRNEIIQLLSVLQDYNDEQSQVASITPEQLLKTVRFPAQAYIRV
                     ISDYLNSGYYKMIEDEFKLGQSGAVSWNKTRKKVEPIVTKNGIVYPQYVVRQHSETDK
                     QLITEISQYCVYESYVKIGWLYRLPNVLKPHRTRDLEVYKSYIHNMMLVATKDRDKQL
                     FSAMHDILNFTNQDDEPEEFYFGTNRFEYIWERLIEATFGNENKEYYFPRTKWLLDIG
                     VEKTNKAIEPDTVMKKNHDIYVLDAKYYKFGDTLNPNHLPTSTSINKQISYGEYIQTN
                     AKFESERKQGMAVYNAFLMPYNSRSKPFNDVSKSTYYSIGESVADWKNSTETYERVQG
                     ILVDVKHLISNAVRPNNIEIENLSNTILKSIEKKRGK"
     gene            complement(7081..8262)
                     /locus_tag="U1041_001756"
     CDS             complement(7081..8262)
                     /locus_tag="U1041_001756"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768849.1"
                     /translation="MSREKSYLGEFTFTNEAVSSEFESLIDEVSGLKTERLVIKSINL
                     PYIEMGYSPGEGLKIITWNRRKNNPLGEFLGLDLNNLSELKNFIDKYGFIYPISQEKY
                     CPVDIEELHSIQERLKAFINLINNQNKSQIKYRELFDSTLYLLLRKYSTTAYKKSKFL
                     PTNSDLQNQLDAAITPLTKDHNAVKTVSVEGQIQSKLSRYSESLNKTVEFDLLEAQQI
                     MQDENTPHWCKRIFNLFYSLDNLVLTDELNKKIDFLFGCIYILNPFYSEQVKIKNTFS
                     TAIYVEIEAQHHFTEYLLEVSKMTIREEFERMLEDIHFTYNTDTMAPDWKLPSLISAL
                     YFSIYYKNSKNIIYRVCQNDYCKQYFEVSSTNSTKRHCSDNCRDSKNARIMRQRKKRR
                     S"
     gene            8675..>9044
                     /locus_tag="U1041_001757"
     CDS             8675..>9044
                     /locus_tag="U1041_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001122248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768850.1"
                     /translation="MPINEKFFNYCQAQSSSTGVHPTESEVLAPMFVQDYYMTSHHSG
                     LLRGTFRQCRIMGISILTAFVPVAEEDYEQMVWWYNNSVNDYLKDFRKPSKNAPKISS
                     WEAFTEKQDLPVIDDGIELYL"
BASE COUNT         3303 a         1161 c         1600 g         2980 t
ORIGIN      
        1 tttggataga aaagcaataa gtaagtagta tccctttttg gaataagtca atgtggtatg
       61 ttaattttgt ttcaatcgtg atacaatata agaagtaatt ttatgtacag aaattaatac
      121 gaatctgtta ggaatttgtc taatttattg gctaaaaaat tagtaggaga gcaaggtaat
      181 gtatttttac gaaaaacgag gaagttatca agtaaaatgt tacagatatg atttgactga
      241 tgaaatgcgt gataaagcgt tagattttgc aaaaaaaatt attctgtctg ataatcaata
      301 ttccagatta ctacctgaag atgtatttct aagtaatgat attgaactta agaataaaat
      361 tgaaattcag cgaacatata tgggaaaact tggtgagatt gcttttttga agttactgaa
      421 agataaaaac aaagtggttg ataccagcgg aatgtttact atatatgaag gacaaagaaa
      481 aactgatagt tatgatttta ttacagattt ttcagaaagt gttgatgtga aaacggggtt
      541 tcgatacaat catagccgac ttttagttaa tttggagcaa tttaacagta aacctaaaaa
      601 tttttatgtc gcagttagat tgaatgcaac tgatactaat attgatacaa aattagtcga
      661 ttggttcagt gtgacacatg cggatatttt aggttttgtt gaatttgatt ttttaaatga
      721 aaagtgtgat ataaaaaatt ttggtgaagg agatgcaaaa tttatcccct ataatagact
      781 tttaggcatt gataagttaa ttagtcggtt taaatagtgt gaatttacgg tgttactaat
      841 agcaccgctt tttttaaaaa atttttataa tatcatttaa tgttgttaaa tataaataaa
      901 tatcaaaaaa tatcaaaaaa aataacataa agatgtctat tgtcaaaaaa ttgctaataa
      961 ctaattaaag tgctattata gggaaagaaa aaatagcagt gaaaggtata gattatggag
     1021 aaagagaagt ggataagtat agaagaagca gcaacttatc taagtgtgaa accagtgact
     1081 attagaaatt ggataaagca taatatggat atgccagctc ataaaatagg aagaaaatgg
     1141 gcttttaagt gttctgagct tgataattgg gtaaaaagcg gaaaaagcac aatggattaa
     1201 ttttttaaag gagtgtggtg tacgtaaata tgctaaatag agcatttaat attgtaaata
     1261 actttttagc acaaaagtat tctcattcag aacttttggt tttgagaagc gaattgaata
     1321 gaatatatta ttctgaatat aaaagtgatg aatattatga taattttttt gaaatacaag
     1381 atttattatc aacattaaat gagagagaat cgatacgaaa aactaaaggt gtttattata
     1441 cgccaaatga cgtagtaagt tttatagtta caaatagttt caagattttg tcacaaaatg
     1501 tcgattattt caaattggat aactcaataa attttgaagt aaattttatg gagatttgct
     1561 ttagtaaaac tgtatttgat ccaacttgtg gggcgggtga gtttctaatt gagactttgg
     1621 attataagta taatttacta gaaagaagta tcgctaatcc cagtattgca gaagtacatg
     1681 cggtattaca aacaatattt ggtaatgata ttaatcctga ctctatcaat attacaaaat
     1741 tgaggatttt tctatatatt ttggaaagat atgggataga ttcaattatc ggaatatcaa
     1801 aaatattaag tcaaaacttt acagtacaag attatttaca acaacttact gtaagtaaag
     1861 aatctctttg tgaacgaaga tttgatgtta ttttaggcaa tccaccatat gtggaacaat
     1921 ctaaaagcgg tttagaacta gaaagaaatt atgggaatat ttatgctcat gttttagaga
     1981 aatcctcaac acaattgaaa caaaatggtg taataggatt tattattcca ctttcttatg
     2041 tgtcaacacc acgtatgaaa tctattaggg agacacttta taaactaatt ccaactcagg
     2101 taattttgaa tttttctgat cggcctgatt gtctttttac atctgtgcat caaaaattga
     2161 ctataatttt tgggaggaat accaattcta ctgtatcaat ttttacaggg aactatactt
     2221 attggtataa aaatgaaaga gattttcttt ttcaaagttc agaagtaatt gaaaataatt
     2281 ttattgaaga gaaatttatt ccaaaactag gaaataactt cgatgtttca atttacaaaa
     2341 atataaaatc tcaagcgaat gcactaaact ctttgtttga tggaggagat aaatcaatat
     2401 atctaaatat gcgtgcagca ttttggatta aagcattttt gaataaacat aaaggttcag
     2461 agtataagat attttcttca agtaatgtcg ataatattaa ctatgctatg tgtctgttta
     2521 attcatcttt attttggtgg ttttggattt gtatatctga ttgttggcac ataactcaaa
     2581 aagagttaaa tggatttaga attccaatta atttcgatac taaaatagtt aaagaattag
     2641 caaataattt ggaaatgaaa ttagaggaaa caaaacttta tgtaggtaca aaacagacag
     2701 agtttgagta taaacataga ctatgtgtag aagaaatcca taaaatagat gattatatta
     2761 atcagctttt tggattaagc gaagctgaaa gtgactatat aaagagtttt gcttataaat
     2821 atcggataag tggaggacga aatgttaaaa ataattgatt tattttctgg tgttggaggt
     2881 ctttcactcg gattcattca gaatggaaat aaagtaaaaa aggcagttga atacgataaa
     2941 accattgcaa actcctacat attaaatcat cccggggtag atgttattat tgatgatata
     3001 gcaaacatag ataatgcagg gatttttaaa gaaggtgatg cagacgtgat agttggcggt
     3061 ccaccatgtc aaggcttttc aatggcagga gctagaatta ggaatggttt catggatgac
     3121 cctcgtaact atctatttaa acattatttt aatattgtaa aatctgtaaa acctaaagta
     3181 ttcattatgg aaaatgtaaa agggattcaa acgatgcaga atggagaaat ttttgctgag
     3241 attcttcgta tattttccga tgctgaatta cttggtggag aaccgtatca attattttat
     3301 aaagtagtaa aagcaactga ctttggaatc cctcaaaaac gagagaggat gataattatt
     3361 gggaccacag tacctaatat taattatatg gatatttggg aagatacaat tatacaaatt
     3421 agaagagaaa taccaacttt ttttgattca gtaactgtcc gtgatgccat ttcaaatttg
     3481 tgtgaaccta cagattcagg cgtagtcaca agtacaagat caatgacgga ttatcaaatg
     3541 tatttagaat cacgaaactc aacattaaca aatcattcaa agacaaacca ctcgactgtt
     3601 gctgttgaga gaatgaaaaa ggtaaaatca ggtgagaatt ttacggtact gaatgaaaga
     3661 ataaattctg tgcatagtgg ttcttatgga aggcttagtt gggatgaacc agcaccgaca
     3721 ataacgacac gatttgatac tccttctggt ggtcgtttta ttcatcctat tgaaaatcgt
     3781 actctaactc ctagagaagc tgcaaggatt caaagttttc ctgatgattt cgtattttat
     3841 ggtaataaaa catctataaa caaacaaata ggtaatgctg taccaccaaa aatttcttat
     3901 ttcttatcta aacttgtaga aaacatattg aagaaaggga atatatgaat agaatgttag
     3961 aacaaaagat taatgaacta gaggcagctc aaaattatga atgttggtat ctcgtgaaac
     4021 aagatacttc gtttgtaagt ttatgctatc aagtagaatt tttacgtcag tttcaagaag
     4081 attctaaagg cttaaaccta gaaagtttta taaagaagag agtatctcag ataaagagcg
     4141 aaaaaaatgg cgttacgatt tctgagactc atagagcact tagagtggct gcattttttg
     4201 gtttgattac tatgacatca aatagctata atactgcaca aatttctcca acattttacg
     4261 aaataaagga actttgtgat ggaaattttg aaaaaatagg attatataaa gatatcgttc
     4321 aaagacaaat cgagaaaatg ttcattagtt caagtattga tgaagagtat aaaggaattc
     4381 gtaaagattt tagactattt ccagtaatgt ttctttataa gattttgatt gaattaggta
     4441 aagccacagg tgattactct atttcaatta acgagtatag atatttagtt gccacatcaa
     4501 aaaaatatga ggactattta aacacattaa ttttgataat gctttcgcgt gaagatatta
     4561 ctgtgaattc tgtgttagaa aaatatagaa tgaaattcga taatcgtcta atccaagcat
     4621 taaaacaact tcagacactt gttattgata atgaaaaaat atcaattcct gtatatcaaa
     4681 ttgaaaatgt aaaaaataag gtctaccaat ttgaaaaatt aaatgttgaa tctgtttcag
     4741 atgagaaata tttaggtttt ttagcttcaa cacaatcgtt acttgagagt gaattcaatc
     4801 cagagaatca aaatgatgaa ataacaaaaa caaacaaccg aaaagtaggt ggggaaaata
     4861 tcctattcta tggagttccc ggctctggaa aaagtcatgc tatagatagt aagtatggaa
     4921 aggagcggat gtatcgagtt gttttccatc ctgattatat gaatacggat tttattggtc
     4981 aaatcttgcc aacaattaaa gaagatgaaa ctatttcata tgaatttaaa cctgggccat
     5041 tcacaaaggt aatgaggaag gcttacgaag attcagtgaa tatgtattat cttatcattg
     5101 aagaaattaa ccgagggaat gctccagcta tttttggaga aatttttcaa ttacttgata
     5161 gaactgatag tggtgaaagt aaatactcag ttgtaaatta cgatatatct aaggctattt
     5221 ttgataatga aaacattcca ataaagattc cgtccaattt gacaatcctt gctaccatga
     5281 acacatcaga tcagaatgtt tttactttag atactgcttt tcaacgtcga tggactatga
     5341 aaatgatatt aaatgatatc aataaagcgg aacataaaaa tgtaaaaata tcagatacat
     5401 ctgttacttg gggactattt aataaagtta ttaatgaatt aatcattagc agtaatacaa
     5461 gtatgctttc atctgaggac aagagattag gtgcatattt catttcacca agtgatttaa
     5521 gtagagacga tgtagaaaag agattttctg agaaggtggt aaaatatcta tgggatgatg
     5581 catttaagtt ttcaagagac aagttattta atacaacgtc atataaaagt ctggaagata
     5641 ttattgttgg atttttatct aagaaagctg atgagcgatt tattattttt aaagatgaaa
     5701 tcagagaatt actgtcctct gaatctgcag atgtaatgga aattaccaac aatgaaatag
     5761 aagatcagaa tccataatag ggagcataga atgggaaatt ttgaagactt acaaatagat
     5821 aagcctcttt atgaatattg tcaaaatgcg accaataagg aaggtgatac atttgtcggt
     5881 attaggtcag aaatagtaga tgaaaaacat aatttgacta tctattttcc tttaggattt
     5941 gaaatatcta aagatgaaac tttagttaga aatgaaataa tacaattatt atcggtgctt
     6001 caggattata atgatgaaca gtctcaggtt gcatcaatta caccagaaca gttgttaaaa
     6061 actgtcaggt ttccagctca agcttatata agagtaattt ctgattattt aaatagtgga
     6121 tactataaaa tgattgaaga tgagtttaaa ctggggcagt ctggagcagt ttcttggaat
     6181 aagaccagaa aaaaggttga gccgatagta accaaaaatg gtattgtcta tccacaatac
     6241 gtggtacgcc aacatagtga gacagacaag caattgatta cagaaattag tcagtattgc
     6301 gtttatgaga gttacgtaaa aattggttgg ttatatagac ttccaaatgt actaaagcca
     6361 catagaacta gagacttaga agtttataaa tcatatatac ataatatgat gttagttgct
     6421 actaaggata gggataagca attattttca gctatgcatg atatcctaaa ttttacaaat
     6481 caggatgatg agccagaaga attttatttt ggaaccaaca gatttgagta tatttgggaa
     6541 cgcctaattg aagctacttt tggaaacgag aataaagagt attatttccc acgaacaaaa
     6601 tggttacttg acattggagt agaaaagacc aacaaagcta ttgaaccaga tactgtgatg
     6661 aaaaaaaatc atgatattta tgtgcttgat gcgaaatact ataaatttgg tgatacttta
     6721 aatccaaatc atttacctac atcaacttca atcaataagc agatttcata cggagagtat
     6781 atacaaacaa atgctaagtt tgaatctgaa agaaaacagg gaatggcagt atataatgca
     6841 tttttgatgc cctataattc tagaagtaaa ccattcaatg atgtgagtaa gagtacttac
     6901 tattccattg gtgaatccgt tgcagattgg aaaaattcta ctgaaacgta tgaaagagta
     6961 caaggaattt tggttgatgt taagcatcta attagtaatg cagtaagacc aaacaatatc
     7021 gaaatcgaga atctatctaa tacaatatta aaaagtattg aaaaaaaacg agggaaataa
     7081 ttaactcctt cgtttttttc gttgtcgcat aattctagca ttcttactat ctctacagtt
     7141 atcagaacaa tgtcgtttgg tactattggt actggatacc tcgaaatact gcttacaata
     7201 atcattttga catactctat aaatgatatt tttagaattt ttataataga ttgagaagta
     7261 tagtgcacta atcaatgagg gtaacttcca atcgggtgcc atagtatctg tgttatatgt
     7321 aaagtgtatg tcctcaagca ttctctcaaa ttcctcacga atagtcattt ttgatacttc
     7381 tagaagatat tcagtaaagt gatgttgtgc ttctatttct acgtaaattg ccgttgagaa
     7441 agtatttttt attttaactt gttctgaata gaacggattc agtatatata tgcaaccgaa
     7501 taagaaatca atttttttat ttaattcatc agttaaaaca aggttatcaa gactataaaa
     7561 taaattgaaa attcttttac accagtgagg tgtattttcg tcctgcataa tttgctgagc
     7621 ttctagcaaa tcaaattcaa ccgttttatt caatgattct gaatatcttg aaagttttga
     7681 ttgaatttgc ccttctactg atacagtttt tacagcatta tgatcttttg ttagtggagt
     7741 aattgctgca tcgagttgat tttgaagatc ggagtttgta ggtaaaaact tagacttctt
     7801 ataagctgtt gtagaatatt ttcttaaaag gagataaagt gttgagtcaa ataattctcg
     7861 gtattttatt tgtgatttgt tttgattgtt tatcaaatta ataaatgctt ttaagcgctc
     7921 ttgaatcgag tgtagctctt caatatccac cggacaatat ttttcttgtg atataggata
     7981 gatgaaaccg tatttgtcaa taaagttttt taattcggat aagttattta agtcgagtcc
     8041 tagaaactca ccaagtgggt tattctttcg tctgttccaa gtgattattt ttaacccttc
     8101 accaggacta tagcccattt caatgtaagg aagattaatt gattttatca ctaagcgttc
     8161 tgtctttaat ccggacactt catctattag tgattcaaat tcagaagata cagcttcatt
     8221 tgtaaaagta aattccccta agtaactttt ttctctactc atttagcccc ccgtaattgg
     8281 taatttaaca aaactctatg acactatcta ttataacact tataacaagt aaaataccaa
     8341 tgataaaaat tttttatcat tggtattttt tatatctatt aaaatagcgt gaaatgatag
     8401 agaatatata tatcaagaaa catttatgaa atggcatgac gatgtcgttt agcttgaatg
     8461 tttagctatt aacaatagca cttgtggtat ctagacagca ttgttacaac tgtaattaag
     8521 ccattaatgt tagtttggat accgtcatct caaatggcaa gttgactaat tatgtaaaaa
     8581 ccgcaaagga aaagcatatg aagtcattta caaaattgaa tattggattg tcatactctt
     8641 tttctttgct tgtcaaagaa aaaggagtcc ttcaatgcca ataaatgaaa aattttttaa
     8701 ctactgccaa gctcaatctt catcaactgg agtacatcca actgaaagtg aagtactagc
     8761 acctatgttt gtacaggatt actacatgac ttcacatcat tcaggtttgc tacgtggcac
     8821 gtttcgtcaa tgtcgtatca tgggtatttc aatactaact gcctttgttc cagtcgcaga
     8881 agaggactat gaacagatgg tctggtggta taacaactca gttaatgatt atctcaaaga
     8941 ttttcgtaag ccaagtaaaa atgcccctaa gatttcatca tgggaagcat tcacagagaa
     9001 acaagattta ccagtaattg atgatgggat tgagctttat ctat
//
LOCUS       DASFQS010000085         8902 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.087, whole genome shotgun sequence.
ACCESSION   DASFQS010000085 DASFQS010000000
VERSION     DASFQS010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8902
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.087"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(219..2213)
                     /gene="pknB"
                     /locus_tag="U1041_001758"
     CDS             complement(219..2213)
                     /gene="pknB"
                     /locus_tag="U1041_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
                     /protein_id="HEM4768851.1"
                     /translation="MIQIGKIFAGRYRIVRQIGRGGMADVYLARDLILDGEEVAVKVL
                     RTNYQTDQIAIQRFQREARAMAELDHPNIVRISDIGEEDGQQYLAMEYVNGLDLKRYI
                     KENAPLSNDVAVRIMGQILLAMRMAHTRGIVHRDLKPQNVLLTSNGVAKVTDFGIAVA
                     FAETSLTQTNSMLGSVHYLSPEQARGSKATIQSDIYAMGIILFEMLTGRIPYDGDSAV
                     TIALQHFQKPLPSVREENANVPQALENVVLKATAKKLNERYKSVAEMYADLASALSMD
                     RRNEPRVELEGNKVDTKTLPKLSQANVEMKVPHTNSSAQVSATDKGPGKKEVAKSGNK
                     PVSKPRPGMRTRYKVLIGAILLTVIATGLMFFNTPRTVTVPDVSGQTVEKATEMIEVA
                     GLEVGNITEEATATVDEGLVIRTSPAAKTTRRQGSKIDIVVATAAMVSIPDVTDKDSD
                     TARQELEALGFQVTIKEEYSEKVAQGLVIKTDPGANSSAEKGAKITLYVSKGVAPQVV
                     PNVVGKTQENATQILQTAGFSIGTITQEYSSSVTAGQVISTDPVANTELTKGSIINLV
                     VSKGKELIMPDLTSGNYTYSQARSQLQALGVNVESIEKQEDRSYYSTTSDIVIGQYPA
                     AGATIDGTVTLYVSVASTGTSSDSSTGSSTSTSTSTDSGR"
     gene            complement(2213..2950)
                     /locus_tag="U1041_001759"
     CDS             complement(2213..2950)
                     /locus_tag="U1041_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEM4768852.1"
                     /translation="MEIALLTDVGQKRSNNQDYINRYKNRAGIDLVVLADGMGGHRAG
                     HIASEMAATDLGAAWVDTQLVTLNDVREWMVAIIDAENQKIHELGQTEEYKGMGTTLE
                     AVVVIDNQMIYAHVGDSRVGLIRDGEYTRLTNDHSLVGALVRAGQLTEEEAQRHPQKN
                     IVTQSIGQAEPIEPDIALKTLEVGDYVLINSDGLTNMVPTEDIRDIVLSDVSIESKVE
                     TLVRFANNAGGLDNITVGLLHITEEAR"
     gene            complement(2989..4302)
                     /gene="rsmB"
                     /locus_tag="U1041_001760"
     CDS             complement(2989..4302)
                     /gene="rsmB"
                     /locus_tag="U1041_001760"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEM4768853.1"
                     /translation="MIINKHETARSLALSVLEQVFDQGAYSNIALNKALESSRLSAQD
                     KGLATELVYGTVSRKITLEWYLAHFIEDREKLDTWVYYLLMLSLYQLVYLDKLPTHAV
                     VNEAVNIAKRKPGTDKFVNAILRKISQSTLPNPADIKRKNKRLSVQYSVPVWLVQTLI
                     AEYGDERAEKIFRSLHDRNKASVRVTDGQQVKRLAEELGAQHSQLSPVGLVKSHGHFA
                     GTDYFKKGLITIQDETSQLVAPTLDIQGDEIILDACAAPGGKTCHMASYLTSGKVIAL
                     DLYEHKLNLIEENARRLGLADKIETKGLDASRVHEEFGPDTFDKILVDAPCSGIGLIR
                     RKPDIRYNKASMDFDSLKTIQLQILDSVCQSLKIGGIITYSTCTIIAKENQEVIHEFL
                     HQHPNFEQVMLEHPKTDIMVDGGLLITPEQYQTDGFFIGQLRRKF"
     gene            complement(4289..5227)
                     /locus_tag="U1041_001761"
     CDS             complement(4289..5227)
                     /locus_tag="U1041_001761"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEM4768854.1"
                     /translation="MTKLIFMGTPAFSATVLKGLLADDQYEILAVVTQPDRAVGRKKV
                     IQMTPVKEVALEYNLPVYQPEKLSGSQEMDELMNLGADGIVTAAFGQFLPTKLLNSVD
                     FAVNVHASLLPKYRGGAPIHYALINGDERAGVTIMEMVKEMDAGDMISSDSIAIEESD
                     NVGTLFEKLAVVGRDLLLQTLPAYIAGDLKPVAQDPEQVTFSPNIQPEEEVLDWNKTA
                     RQLFNHIRGMYPWPVAHTYWQGERFKIQEAVETEGEGPVGRVIARSKKELIIATGQGA
                     LSLKTVQPAGKPKMTIADFLNGAGRDIAVGDQFDNQ"
     gene            complement(5370..7760)
                     /locus_tag="U1041_001762"
     CDS             complement(5370..7760)
                     /locus_tag="U1041_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEM4768855.1"
                     /translation="MLAQVIVDVPLMQTDQAYFYQVPADLEEGLMVGVRVHVPFGKGN
                     RLIQGIIVDLIDEDDALDLQDLKELAEVLDYSPVLNQEQFWLADQMRKSVFSYKITLL
                     KAMLPSLLNSTYDKLLRPGNGLEMAEQVSLFGDKDQIRFSDLDVKEQGKIMRLAQSGK
                     ILVDYVAKDKKQIKTEKWYRVCLEKLREADISNRAKKRQQLREFLLEHSEDQLLSNLK
                     SDYSADTLRYFQENGYIEVREEEVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIG
                     QESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLTPQMTNRFISRFGQQ
                     VAILHSGLSDGEKYDEWRKIEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQD
                     SNPRYHARDVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIP
                     EVEVVDFRDYIGQQEASNFTPVLIDKIREKLARKEQVVLMLNRRGYSSFVMCRDCGSV
                     DQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKAYDELQE
                     LLPEARILRMDVDTTKKKGAHEDLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLN
                     ADTALNLPDFRSSERTFQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEG
                     FYRYEMGIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAYETVAFLRQHLTDAIQILGPT
                     PKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM"
     gene            complement(7845..8159)
                     /locus_tag="U1041_001763"
     CDS             complement(7845..8159)
                     /locus_tag="U1041_001763"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001817694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEM4768856.1"
                     /translation="MMLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAKPTQEFTSV
                     KSTLRALEEIESGNVVIHPDPEAKREAVRRRAEEAKRLAEEEEKKIKEQIAKEKEEGE
                     KI"
     gene            complement(8192..8812)
                     /gene="gmk"
                     /locus_tag="U1041_001764"
     CDS             complement(8192..8812)
                     /gene="gmk"
                     /locus_tag="U1041_001764"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEM4768857.1"
                     /translation="MKERGLLIVFSGPSGVGKGTVRKEIFESSDNKFEYSVSMTTRPQ
                     RPGEVDGVDYFFRSREEFEDLIRQGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLE
                     IEVQGALQVKKKVPDGVFIFLTPPDLEELQDRLVGRGTDSEEVIAQRIERAKEEIALM
                     REYDYAVVNDKVPLAAERVKRIIEAEHFRVDRVIGRYDEMIRDVNK"
BASE COUNT         2374 a         2169 c         1703 g         2656 t
ORIGIN      
        1 agttcaaagc aacgagatgc aggctatact tgggtacggc aaagtaaatt aacgaagcaa
       61 acaaaataaa ctaaacatga ctataaacta tgcaaatcac tcctaggcca tcactcttga
      121 tggacagaag gaaacaaatt tggcataggg gactgctcac aagctacgct ctctaatcaa
      181 gagaaaaagg ttcggcatct gcccaacctt attcatcttt atcgtccgct atctgttgaa
      241 gtacttgtgc tggtggaact tcctgttgag gaatcgctac tggtgccggt cgatgcaacg
      301 gagacataca aggtaactgt tccatcaatt gttgctccag cagcaggata ttgtccaatg
      361 acgatgtcac ttgtcgttga gtaatagctt ctatcttctt gtttctcaat actttccaca
      421 ttgacgccta gcgcttgtaa ttgactacgt gcctgtgaat aggtgtaatt gccagatgtt
      481 aaatcaggca taatcaattc ttttcctttt gaaacaacta gattgatgat agaacctttt
      541 gtcaactctg tattggcaac aggatctgta ctgataacct gacccgcagt aacagatgag
      601 ctatattcct gagtaatagt tccaatactg aagcctgctg tctgaagaat ttgagtagca
      661 ttctcctgag tttttccaac aacgtttggc acaacttgtg gcgctactcc tttggaaacg
      721 taaagggtaa ttttcgcccc cttctcagca gaactatttg ctcctggatc tgttttgata
      781 acgagtcctt gagcaacttt ttcgctatat tcttctttta ttgtcacttg gaaaccaaga
      841 gcctccaatt cctgccgtgc agtatcagaa tccttatctg tcacatctgg aatagatacc
      901 atcgcagccg ttgctactac aatatcaatc ttacttcctt gacgtctggt cgtctttgca
      961 gccggagagg tccgtattac caagccttca tctacagtcg ctgtcgcttc ttctgtgatg
     1021 tttccaactt ccaatcctgc cacttcaatc atttctgtag ctttttcaac ggtttgacca
     1081 gacacatcag ggactgtaac tgttcgtgga gtgttgaaaa acatgagtcc agtcgctatg
     1141 actgttaaca aaatagcccc tatcaagact ttgtagcgtg tacgcatacc tggccttggt
     1201 tttgaaacag gcttatttcc cgacttcgcc acttctttct taccaggccc cttatccgtc
     1261 gcagaaactt gggcagaact gtttgtatgc ggcactttca tttcaacatt ggcttgggag
     1321 agtttcggca aggtttttgt atcaaccttg ttcccttcta gttcaaccct gggttcattc
     1381 cgacgatcca tggatagagc cgaagctaaa tctgcataca tttctgcaac cgacttatag
     1441 cgctcgttta attttttagc cgttgctttt agtacaacat tttctaaggc ctgaggtacg
     1501 ttggcattct cttctctaac agatgggaga ggtttttgga aatgctgaag agcgatcgtc
     1561 acagcactgt ctccatcata gggaatgcga cccgtcaaca tttcaaaaag gatgatcccc
     1621 atcgcataaa tgtcactttg aatggtcgcc ttcgaaccac gcgcctgctc aggtgaaaga
     1681 tagtgaacag aacccaacat ggagttggtt tgtgtcaaac tcgtttcagc aaaggcaact
     1741 gcaataccaa agtctgttac tttagcaact ccattggaag tcaaaaggac gttctgaggt
     1801 ttcaaatctc gatggacaat tcctctcgtg tgcgccatgc gcatagcaag gagaatctgt
     1861 cccataattc gcaccgcaac atcgttggag agtggtgcat tttcttttat ataacgtttt
     1921 aaatcgaggc cattgacata ttccatagcc agatactgtt gaccatcttc ttcaccgata
     1981 tccgaaatac gaacgatatt gggatggtca agttctgcca tggcacgcgc ttcacgttga
     2041 aaacgctgga tagcaatttg atctgtctga tagttggtcc gaagaacttt aacagcaacc
     2101 tcttctccat ctaaaatcaa atctcttgct aggtaaacat ctgccatacc gcctcgacca
     2161 atttgccgaa cgattcgata ccgaccggca aagatcttac cgatttgaat cattacctag
     2221 cctcctccgt aatgtgaagc aaacctactg taatattatc tagaccgcct gcattattgg
     2281 caaaacgtac aagtgtttct accttgcttt caattgaaac atcactcaat acaatatcac
     2341 gaatatcctc ggttggtacc atattggtta agccatcgct gttaataagg acataatctc
     2401 caacctcaag agttttcaaa gcaatgtctg gttcaattgg ttcggcttgt ccaatggact
     2461 gcgttacaat atttttttga ggatgacgct gtgcttcttc ttctgtgagc tgaccagctc
     2521 gaacaagggc acctaccagc gaatggtcgt tggttagacg tgtatattcg ccatctctaa
     2581 tcaatccaac tcgtgaatct ccaacatggg catagatcat ttgattgtcg atgacaacaa
     2641 ctgcctcaag agttgttccc atccccttgt attcttctgt ctgtccaagt tcatgaatct
     2701 tttggttttc agcatcaatg attgcaacca tccattcacg gacatcattc aaggtcacta
     2761 attgagtatc aacccaagca gctcccaaat ctgttgctgc catttcactg gcaatatggc
     2821 cggcacggtg accacccatt ccatcagcta acacgaccaa atcaatccct gcgcggtttt
     2881 tgtagcgatt gatatagtct tggttgttcg aacgtttctg tcctacatca gtaagtaatg
     2941 caatttccat aatttttatc gttgctcagc aacttcctcc tcttatttct agaattttcg
     3001 tcttaattga ccgatgaaaa atccatctgt ttggtattgt tctggggtta tcaagagacc
     3061 cccatccacc ataatatctg ttttgggatg ctccagcatg acctgttcaa aattaggatg
     3121 ctggtgtaaa aattcgtgaa taacctcttg gttttcctta gcaataatcg tacatgtgct
     3181 ataggttatt ataccaccaa ttttcaagct ttggcaaaca ctgtccagta tctgcaactg
     3241 gatagtcttt agagaatcaa aatccatcga tgccttgtta taacgaatat ctggcttacg
     3301 gcggatgagt ccaatacctg aacatggggc atccactagg attttatcaa aggtatctgg
     3361 accaaattcc tcatgaacac gactggcgtc cagacctttg gtctcaatct tatctgctag
     3421 gcctaaacga cgtgcgtttt cttcaatcag gtttagttta tgctcgtata aatcaagagc
     3481 aataacttta ccacttgtta aatagctggc catatgacag gtttttccac ccggagccgc
     3541 acaggcatcc aagatgattt catctccttg aatatccaaa gtcggagcca ccaattgact
     3601 ggtttcatct tgaatggtga taagtccttt cttgaaataa tctgtccccg caaagtgtcc
     3661 atgagattta accaacccaa ctggtgataa ctgcgagtgt tgagcgccta gctcctctgc
     3721 caatcgcttc acttgttgac catctgtcac gcgtacactg gccttattcc gatcatgtaa
     3781 gcttcggaaa atcttctctg cacgttcatc gccatattct gcaatcaggg tttggaccag
     3841 ccaaactggt acagaatact gaacggatag acgtttattt tttcgtttga tgtccgctgg
     3901 atttggcaaa gtcgattgac tgatttttcg caaaatggca ttaacaaatt tgtcagttcc
     3961 aggctttcgc ttggcaatat taactgcctc attgacaact gcgtgggtag gcaatttgtc
     4021 caaatatacc aactggtaga ggctcaacat gaggagatag tagacccaag tgtccaactt
     4081 ttctctatct tcgataaaat gtgccaaata ccactctagg gtaattttac gagaaaccgt
     4141 cccataaacc aactcggtcg ccaagccctt gtcctgtgct gataaacgag aagattctag
     4201 ggccttattg agagcgatgt tcgagtaagc accttgatca aagacttgtt ccaatacaga
     4261 taaggctaga cttcttgctg tttcatgttt attgattatc aaattgatct cctactgcaa
     4321 tatctcgacc tgcaccattt aaaaagtctg caatggtcat ttttggctta ccagctggct
     4381 ggacagtttt cagagaaagg gctccctgac ctgtcgcaat gatcaattct ttcttgcttc
     4441 gagcaataac ccgaccaact ggtccttcac cttctgtttc tacagcttct tgaattttaa
     4501 accgttcgcc ttgccaatag gtgtgggcaa cgggccacgg gtacataccg cgaatgtgat
     4561 taaatagttg acgagctgtc ttattccaat ccagtacctc ttcttctggc tggatatttg
     4621 gtgagaaggt tacctgttct ggatcttgag cgactggttt caagtcacca gcaatgtagg
     4681 ctggtaaggt ttgtaataat aaatcccgac caacaacagc caacttttca aacaaggtgc
     4741 cgacgttgtc gctttcttca atagcaatgc tatcgctgga aatcatgtca ccggcatcca
     4801 tttccttgac catttccatg atggttacgc cagcacgttc atcaccgtta atcaaagcgt
     4861 aatgaatagg ggcaccgcca cggtatttag gaagaagaga agcatgaaca ttgaccgcaa
     4921 agtcaactga gttcaataat ttggttggta ggaattgccc aaaagctgcc gtcacaatcc
     4981 catctgctcc taaattcatc agctcatcca tttcttgact tccagatagc ttctctggtt
     5041 gatagactgg taaattgtat tccaaggcta cttctttcac aggtgtcatt tggatgactt
     5101 tttttcgtcc aacagctcgg tcaggctggg taacaacagc taagatttca tactgatcat
     5161 ccgccaaaag accttttaag actgtcgcag aaaatgctgg tgttcccata aaaatcaact
     5221 ttgtcatctt tgctttctca tctcctttac attacatcgt tcgtacttat tctattatcc
     5281 cttaattata ccatttttgc ttattttttc cttaattcat gcctatttaa agccttttaa
     5341 cgcaaaaaaa taaagccgat tactcgactt tacatcatat tctgcggttc attgtcaata
     5401 atcagccgca aatcttgatt ttctctctcc tgcgtccaat ccaaaatctg attcaatacc
     5461 tcttccaaac ggtcttcatg ccggtatttc aagatgatct ggtagtggta gagattatgg
     5521 gttctggcaa taggcttggg cgtcggtccc aggatttgaa ttgcatctgt taagtgttga
     5581 cggagaaagg ctacagtttc ataggctttt ttcacgacaa attcttctga cttgtgcgaa
     5641 aatgttaatc caactgtgaa atagtaaggc ggatagccaa gatttttccg aatgcccatc
     5701 tcataacgat agaaaccttc ataatcctgc tctttggcaa aagcaatggc ataatgattg
     5761 gggttatagg tctggatcag gacctcccct tccttatcag ctcgaccagc ccgaccagct
     5821 acctgagtta gcaactggaa agtccgctca gaagaccgaa aatcaggcaa attaagtgcc
     5881 gtatccgcat tgagcacgcc aactagggtc acatttggaa aatccaagcc tttggcaatc
     5941 atctgagttc ccagaagaat atccgcttcg cctcgaccaa accgttcgag caagtcctca
     6001 tgagcacctt ttttcttggt agtatccaca tccatacgca aaattctagc ttctggcaag
     6061 agctcctgca attcatcgta ggccttttgc gtacccgtcc cataataacg aatagaacga
     6121 ctttgacagt ttggacaggt ctgaggaatc cccttttgaa aaccacaata atggcaattc
     6181 atcgtttttg tatccatgtg aagcgtcagg gaaatatcac aattgggaca ctggtcaacg
     6241 ctaccgcaat cacgacacat gacaaaagaa gaataaccac gcctattcaa cataagaacg
     6301 acctgttcct tacgagccaa tttttctctt atcttatcaa tcagaacagg agtaaaatta
     6361 ctagcctcct gctgaccgat ataatcacgg aaatccacaa cttccacttc tggaatacga
     6421 gccaagggat tggccctctg gttaagagtc agtcttccat agactcctcg actagcccga
     6481 gcccgtgttt caagactcgg cgtagctgaa cccaaaacca gagtcgctcg attataatca
     6541 gcccgcaact ttgccacatc acgcgcatga tagcgtggat tactgtcctg cttgtaggtc
     6601 gcctcatgct cctcatcaat gatgataaca cccaagtttg tcaaaggggc aaaaatggcc
     6661 gaacgggccc cgacaaccac ctgggcattt cccgcctcaa tcttccgcca ctcatcgtac
     6721 ttctctccgt cagacaatcc agaatggaga atggcaacct gctgaccaaa acgagaaata
     6781 aaacgattgg tcatctgagg ggtcaaggaa atttcaggca ccagcatgat ggccgttttc
     6841 cccattttca agaccctatc aataacctgg agatagactt ccgtcttccc agaacctgtc
     6901 actccttgca gtagaaatgt ctgactttcc tgaccgatag aggccacaat ctcccgaacc
     6961 gcaatcgcct gctctggatt caaatccaag gcctgcgttt tttctacctt atcaaaaaca
     7021 ccctgagtcc gcgacacttc ctcctccctg acttctatat agccgttttc ttggaaatag
     7081 cggagcgtat cagctgaata gtccgatttt aggtttgaaa ggagctggtc ttctgagtgt
     7141 tccagaagaa attcccttaa ctgctgccgt tttttagccc gattgctaat gtctgcttct
     7201 cgtaatttct ccagacaaac tcggtaccat ttttctgtct tgatttgctt tttatccttg
     7261 gccacatagt ctaccaagat ttttcctgac tgggccaaac gcatgatttt cccttgctct
     7321 ttcacgtcta agtcagaaaa acgaatctgg tccttatcac cgaacagact gacctgctcg
     7381 gccatttcca agccattccc cggtctgagt aatttgtcat aggtcgaatt gagcaagcta
     7441 ggcaacatgg cttttaagag ggtaatttta taggagaaga ccgacttcct catctggtcc
     7501 gccaaccaaa attgctcttg attgagaaca ggactatagt ccaaaacctc ggcaagctct
     7561 ttcaaatcct gcaaatcaag tgcatcatct tcatcaatca agtcaactat aattccttga
     7621 atcagccgat tgcccttgcc aaagggtaca tggacacgca caccaaccat aagtccctct
     7681 tccaagtcag ctggtacttg atagaaatag gcctgatcgg tctgcatcaa ggggacgtct
     7741 acaataacct gtgctaacat acttccttcc tcctttctgt caaaactttc atcattccgt
     7801 aagtgaaaag aaacccggat ggtgatccca accgagtctt gtttctaaat cttttcgcct
     7861 tcttcttttt ctttagcgat ttgttctttg attttcttct cttcttcttc tgccagacgt
     7921 ttcgcttctt ccgcacggcg acgaactgcc tcacgttttg cttctggatc tgggtggata
     7981 accacattgc cagattcaat ttcttccaag gcacgaaggg ttgattttac tgaagtaaat
     8041 tcttgagttg gctttgcgcc agcttctaat tcatgggcac gttttgcctc aagaatgacc
     8101 aaggaatact tagatggtac cttgtccaac aaggtatcga tagatggttt caacatcata
     8161 gttctattct ctactttcta ttaaggttct attacttgtt cacatcacga atcatttcat
     8221 catagcgacc gattacgcga tcgacacgga aatgctctgc ttcgataatt cgtttgacac
     8281 gttcagctgc caaaggaact ttatcattga caaccgcata gtcatactcg cgcatgaggg
     8341 caatctcttc tttggcacgt tcgatacgtt gcgcaatgac ttcctcactg tctgtcccac
     8401 gaccaaccaa gcgatcttgt agttcttcca aatctggtgg cgtcaagaaa atgaaaacac
     8461 cgtctggaac ttttttcttc acttggaggg caccctgtac ttcaatttct aaaaagacat
     8521 caattccctt atcaagagtt tcattgacat aggtcagagg tgttccatag taatttccaa
     8581 cgtactctgc atattccaac atctgaccct ggcgaatcaa atcttcaaat tcctcacgac
     8641 tacggaagaa atagtcaaca ccatcaactt ctcccggtct ctgtggacgt gtcgtcatgg
     8701 atacagaata ttcaaattta ttatcagagc tttcaaaaat ttcctttcga actgttcctt
     8761 ttccaacacc agatgggcca gaaaagacaa tgagtaagcc tcgctctttc atgatatctc
     8821 ctttaaaatc tttcattcta gtgtaacaaa aatccctagg aatttcaact gattttaaat
     8881 gagcagggta ttttttcaaa ca
//
LOCUS       DASFQS010000086         8813 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.088, whole genome shotgun sequence.
ACCESSION   DASFQS010000086 DASFQS010000000
VERSION     DASFQS010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8813
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.088"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            154..849
                     /locus_tag="U1041_001765"
     CDS             154..849
                     /locus_tag="U1041_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein"
                     /protein_id="HEM4768858.1"
                     /translation="MRKVQFFLLIESMIFTMAAFDVVANEASRTLLLFSALLLVIWYF
                     LGRKVNSVLLVSSLSLLFLVFVLNPFFIIGIMLLVVYMLINFFSRYEKRNQYTHIVFS
                     DYSLQVQKEKNRWFGNHDHSQDRFGFEDINIVRLFGNDVVDLDKTVLVGRDNIVVIRK
                     TFGRTKIIVPIDVEVALSATSIYGRVSFLGESYWDLRNESIAVNSPDYQESHKRVKVV
                     TNNILGDVEVVRV"
     gene            846..1862
                     /locus_tag="U1041_001766"
     CDS             846..1862
                     /locus_tag="U1041_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4768859.1"
                     /translation="MRKRTYLLLAWFACLIVFVVIASTLPLLNYSLLDVTLWISTEQL
                     VFTLILLVIVLTLFLAVMVQTVSLASTQVMRTKLQAILKNKSIRTDTESDQLLLQLSD
                     KVRNLTRQVQLVDNQDLVKKEEIVEGERKRIARDLHDTVSQELFATSMILSGLSSNLS
                     TLPQETLQEQLMLVKDMIESAQRDLRILLLHLRPSELESKTLVEGFELILREVSDKSN
                     IIVHFQHEVEELPKLIEEHLFRIAQEIISNTLRHAKAKHLDVYLLQKETELQLKMADD
                     GIGFQQGADDELSYGLQNIRERVEDMAGTIKIRTAPNKGVAIDIRIPLLKGKEDEYDS
                     SDAG"
     gene            1834..2475
                     /locus_tag="U1041_001767"
     CDS             1834..2475
                     /locus_tag="U1041_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4768860.1"
                     /translation="MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAK
                     ALEVKPDVVVMDLVMPKMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARG
                     YMLKTSSADEILAAIRKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLA
                     KGYDNQRIADESFISLKTVKTHVSNILSKLAVSDRTQAVVYAFQHGLVAQEDQ"
     gene            2525..3925
                     /locus_tag="U1041_001768"
     CDS             2525..3925
                     /locus_tag="U1041_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4768861.1"
                     /translation="MDAKLRYKAKKIKIVFFDIDDTLRVKNTGYIPESIKQVFKSLKE
                     KGILTGIASGRTPYGLVPEIKALKPDFFAMINGSYVEDAKGQVVYHQPMPQNLVESVL
                     NWAKEIGIEYGMLGSQKGTLSARTDRISQVIDLIYEGLETNPTFYKENDIYQLLTFEK
                     DGHEVELPEELQAELRSVRWDAISSDIVLKGSSKATGVAKVVEKLGLKPENVLVFGDG
                     LNDIELFDYAGISIAMGHSHPELQKHADYITKKVEEDGIFDALEKLGMVEKEKYFPQL
                     DLENVTGPVAHIKTNHGKLTVKLFPEIAPKTVANFVALSKDGYYDGIIFHRIIKDFMI
                     QGGDPTGTGMGGESIYGTAFEDEFSMEAFNLRGALSMANAGPNTNGSQFFIVQNQNFP
                     YNAKELERGGWPKEVAEAYVKNGGTPHLDQRHTVFGHLVDEESFVVLDAIAAVATDSA
                     DRPHEDVVIETIEIED"
     gene            3927..4298
                     /locus_tag="U1041_001769"
     CDS             3927..4298
                     /locus_tag="U1041_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEM4768862.1"
                     /translation="MKIGDKLKGTVTGIQPYGAFVQLENGTTGLIHISEIKTGFVDNI
                     YDHLKLGQEVLVQVVDFDEYTEKASLSIRTLEEEQQKIPRHHRFTNERNKIGFSPLAK
                     QLPKWIEEAKGYLKEHKEKKV"
     gene            complement(4324..5250)
                     /gene="cysK"
                     /locus_tag="U1041_001770"
     CDS             complement(4324..5250)
                     /gene="cysK"
                     /locus_tag="U1041_001770"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEM4768863.1"
                     /translation="MAIYQNITQLVGKTPIIKLNNIVPEGSADVYVKLEAFNPGSSVK
                     DRIALAMIEDAEKAGTIKPGDTIVEPTSGNTGIGLAWVGAAKGYKVIIVMPETMSVER
                     RKIIQAYGAELVLTPGSEGMKGAIAKAKEIAEEKNGWVPFQFANPSNPKVHEDTTGQE
                     ILEDFGTTGLDAFVSGVGTGGTVSGVSHVLKTANPDIAIYAVEADESAVLSGEAPGPH
                     KIQGISAGFIPDTLDTSAYDGIIRVKSDDALATGRAIGGKEGFLVGISSGAAIHAAIE
                     VAKELGTGKKVLAILPDNGERYLSTALYEFND"
     gene            complement(5340..5972)
                     /locus_tag="U1041_001771"
     CDS             complement(5340..5972)
                     /locus_tag="U1041_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEM4768864.1"
                     /translation="MKEFKTIREDGIVEEEIKKSRFICFMKRVTTEEEARDFINKIKK
                     EHYKATHNCSAFVLGENMEIKRSSDDGEPSGTAGVPMLTVLENHELTNVATVVTRYFG
                     GIKLGAGGLIRAYAGAVANAVKEIGVVEVKEQEGISISMSYAQYQEFANWRAEQGLEE
                     FDTQFTTEVSTMIFVDKEFLEQTLASLTDFYHGKVSAEKANSRIVEVPVY"
     gene            6029..7321
                     /locus_tag="U1041_001772"
     CDS             6029..7321
                     /locus_tag="U1041_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4768865.1"
                     /translation="MKELENYYGRLFTKYQLTAKEREIAEKVPSITKKNNCFRCGTTF
                     EEENKLPNDAYYCRACLLLGRVRSDEKLYHFPQEDFPITKCLKWKGQLTDWQQRISDG
                     LVANVENNRATLVHAVTGAGKTEMIYHTVASVIDKGGAVCLASPRIDVCIELYRRLQN
                     DFSVPISLLHGESEPYFRTPLVVATTHQLLKFYQAFDLVLIDEVDAFPYADNPMLYRA
                     ADNAVKEAGVQVFLTATSTDELDKKVRTGKLNRLSLPRRFHGNPLVVPQKVWFSKFDD
                     TLKKNRLVPKLKKAIEEQRKSGFPLLIFVPEISKGQEFTKIMKKTFPEETIGFVSSQT
                     ENRLEIVEGFRKREITVLISTTILERGVTFPCVDVFVVQANHYLYTASSLVQIAGRVG
                     RSMERPTGLLQFYHEGSTGAIEKAIAEIKQMNKEAGYV"
     gene            7314..7979
                     /locus_tag="U1041_001773"
     CDS             7314..7979
                     /locus_tag="U1041_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEM4768866.1"
                     /translation="MSNCLLCGQAMKNKTRFSDLIFFSKEKSGICEECFSTFEEIAEQ
                     HCPHCYKNGESESCKDCQYWQNQGKPVVHTALYQYNQAMAHYFSRYKFQGDYVLRNIF
                     AKKLRIALSQFPDYTIVPIPISQKRLSERGFNQVEGLLNATNIPYQSLLGKYESQKQS
                     SKNRAERLEAKQMFYLLDEKEVPEKILLFDDIYTTGATIQLAVELFMKIGRKEIKTFS
                     LTR"
     gene            8057..8599
                     /gene="raiA"
                     /locus_tag="U1041_001774"
     CDS             8057..8599
                     /gene="raiA"
                     /locus_tag="U1041_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000599099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEM4768867.1"
                     /translation="MIKFSIRGENLEVTDALRTYVEEKVAKIEKYFNEEQELNAKVNL
                     KVYRDKRAKVEVTIPVGAVTLRAEDISQEMYGSIDLVVDKIERQIRRNKTKIERKHRQ
                     KVATGQVFTDELVEQTGEEVKVVRTKQVDLKPMDMEEAVLQLELLGHDFFIYTDANDG
                     TTNVLYRREDGDLGLLEVRQ"
BASE COUNT         2844 a         1633 c         1844 g         2492 t
ORIGIN      
        1 tttgatacat cgtcactttc gacttgccgt actttagtac agcctgcgcc tcagttcctt
       61 gtctaaaagc taattcattc gactatattt cctactttgg atggagttct tttacttatt
      121 ttttgttaca atagtataga aaggatggag aagatgcgaa aagttcaatt ttttctacta
      181 atagaaagta tgatttttac gatggcagcc tttgacgtag tagccaatga ggccagtcgg
      241 accctgctac ttttctctgc cttattactc gtcatttggt acttcctagg aagaaaagtt
      301 aatagtgttt tactggtcag ctccttatct ctattatttt tggtctttgt tttaaatccc
      361 ttcttcatta ttgggattat gctactagtc gtgtacatgc tgattaattt cttttcacgt
      421 tatgaaaaga gaaaccaata tacccacatt gtttttagtg actattctct acaggttcaa
      481 aaagagaaaa atagatggtt tggcaaccac gatcactctc aagataggtt tggttttgaa
      541 gatattaaca ttgtacgctt gtttggcaat gatgtagttg atttggataa gactgtatta
      601 gttggcagag ataatattgt tgtaattcgt aaaacgtttg gacggacaaa aattattgtt
      661 ccaattgatg ttgaggttgc actttcagca actagtatct atggacgagt aagtttcctg
      721 ggggaatcat actgggattt gcggaatgaa agtatagcgg tcaatagtcc cgattatcaa
      781 gaatcacaca aacgtgtaaa agtcgttacc aacaatatac tgggagatgt ggaggtggtt
      841 cgcgtatgag aaaacgtacc tacctactcc tcgcctggtt tgcctgtctt attgtttttg
      901 tggtgattgc ttccaccctc ccacttttaa attattcatt actagatgtt acgctctgga
      961 tttcaacgga gcagctcgtg tttactctca ttctactagt tattgttttg accctttttc
     1021 tagctgtaat ggtacaaact gtcagcctag cctccactca ggttatgcgg acgaagttac
     1081 aagctatctt gaagaataaa agtattcgaa cagataccga aagtgatcaa ctcttgctcc
     1141 agttatctga taaggtcaga aacctcacgc gtcaggtgca gctggttgac aatcaagatt
     1201 tagtcaagaa agaagagatt gttgagggag aacggaaacg gattgccagg gatttgcatg
     1261 atacggttag tcaagagtta tttgcaacga gcatgatttt atcaggatta tcgtccaatc
     1321 tatccactct tccgcaggaa actttgcagg aacagctgat gctcgtgaaa gacatgattg
     1381 agtctgctca aagagaccta cgcatcctat tattacatct acgcccaagt gaactcgaaa
     1441 gtaaaacctt ggttgaagga tttgagctga ttttgcgtga agttagcgac aaaagtaata
     1501 ttatcgttca tttccaacat gaagtagagg agctaccgaa actaattgaa gaacatctct
     1561 tccgcattgc gcaagaaatt atcagtaata ccttgcgaca tgccaaggcc aagcatttgg
     1621 atgtttacct cttgcagaag gaaacagaac ttcagttgaa aatggcagac gatggtatcg
     1681 gcttccaaca aggtgcagat gatgaattaa gttacggtct tcaaaacata cgtgagcggg
     1741 ttgaagacat ggctggaacg ataaaaattc gcacagctcc aaataaggga gtggcgattg
     1801 atattcgtat cccactattg aaaggaaaag aagatgaata cgattcgagt gatgctggtt
     1861 gacgaccatg agatggtccg tctaggattg aaaagttact taaatttaca gccagatgtt
     1921 gaagtagttg cagaagctag tgatggcgag gaaggtttgg ctaaagcatt agaggttaaa
     1981 cccgatgttg tagtgatgga cttggttatg cccaagatga ctggcgtaga agcaaccctg
     2041 gccttgctga aggaatggcc gcaagcgcag attgtcatcc tgacctccta cctagataat
     2101 gaaaaaatct atcctgtgct ggaagcagga gctcgtggct atatgttgaa aacgtcaagt
     2161 gctgacgaaa tcttagcagc catccgcaag gtagctcttg gagaatatgc tattgagaca
     2221 gaagtagaga aaaaagtaga gcaccataaa cgccacccag atttacatga tgacttgaca
     2281 gctcgtgaac gcgaaatctt gacgctgtta gccaagggat atgataatca acgaattgca
     2341 gatgagtcct tcatttccct aaaaactgtt aagacccatg tttccaatat cttatccaaa
     2401 ctagctgtta gcgatcgtac tcaagcagtt gtttatgctt tccagcatgg tttggtggcg
     2461 caagaggacc aatagtggta taatgaaaat tagttaattt tcaaccaaag gataatggaa
     2521 ttatatggat gcaaaactca gatataaggc aaaaaaaata aaaatagtct tttttgacat
     2581 tgatgacacg ctacgtgtaa agaatacagg ctacattcct gaatcaatta agcaggtttt
     2641 caaatcactg aaagaaaagg gaattttgac aggaattgcg tcaggacgaa cgccttatgg
     2701 tttggtgcca gaaatcaaag ccttaaagcc agactttttc gctatgatta acggctccta
     2761 cgtagaagat gccaaaggtc aggtagtgta ccatcagcca atgccccaaa atttagtaga
     2821 atctgtatta aattgggcta aagaaattgg aatcgaatat ggtatgcttg gtagtcaaaa
     2881 agggacactt tctgcacgaa ctgaccgcat tagtcaagta attgacttga tttatgaagg
     2941 tttggaaaca aacccaactt tttataaaga aaatgacatc taccaattgc taactttcga
     3001 gaaagatggt cacgaagtag aacttccaga agagttgcaa gcggaattgc gtagtgttcg
     3061 ttgggatgct atttcatcgg acattgtgct aaaaggctct tccaaagcaa ctggtgttgc
     3121 taaggttgtt gaaaaactag gcctgaaacc tgaaaatgtc ctagtgttcg gagatggact
     3181 caacgatatt gagttattcg attatgcagg aattagtatc gctatggggc attcgcatcc
     3241 agaactgcaa aagcatgcag attatatcac aaaaaaagta gaagaagatg gcatttttga
     3301 tgccttggag aaattaggta tggtagaaaa agaaaaatat ttcccgcaat tagatttgga
     3361 aaatgttaca ggaccagttg cgcatatcaa gactaaccat ggtaagttaa cagtaaaact
     3421 cttccctgaa attgcaccca aaactgtagc aaatttcgta gctctttcta aagatggcta
     3481 ttatgacgga attatcttcc atcgtattat caaagacttt atgattcaag gtggcgatcc
     3541 aaccggaaca ggtatgggtg gtgaatctat ttatggtact gcgtttgaag atgaattttc
     3601 aatggaagct tttaatctca gaggagcctt gtcaatggcc aatgcaggac caaatacaaa
     3661 tggaagccaa ttctttatcg ttcaaaacca aaacttccca tacaatgcga aagaattaga
     3721 acgaggcggt tggcctaaag aagttgcaga agcctatgtc aaaaatggcg ggacaccaca
     3781 tctagatcaa cgccacacag tgtttggtca tctagttgat gaagaatcct tcgtcgtctt
     3841 ggatgctatc gcagcggttg caacagattc agcagatcgt ccacatgaag atgttgtaat
     3901 tgagaccatc gaaatagagg attaagatga aaatcggaga taaactcaag gggacggtaa
     3961 cgggcattca gccgtatgga gcctttgtac aattagagaa tgggacgacg ggcctaatcc
     4021 atatctcgga aatcaaaaca ggttttgttg ataatattta tgatcattta aaattggggc
     4081 aagaggtttt ggtacaggta gtcgactttg atgaatatac tgaaaaggct agtttatcaa
     4141 tccggacctt agaagaagaa caacaaaaaa ttccgcgtca tcatcgtttt acaaatgaac
     4201 ggaataaaat tggtttttcc cctttagcaa aacaacttcc gaaatggatt gaggaagcta
     4261 aaggctatct caaagaacac aaagaaaaga aggtatagga tgcattccta accttctttc
     4321 tttttaatca ttgaactcat aaagagctgt tgacaagtaa cgctcaccat tatcaggcaa
     4381 gattgccaac actttttttc cagttcccaa ctccttagca acttcgatag cagcgtgaat
     4441 tgctgcacct gaagaaatac caactaagaa tccttctttt ccaccgatag cacgacctgt
     4501 agctaaggca tcatcggatt tgacacgaat aatgccatca taggcgctag tgtccaaagt
     4561 atctggaata aaacctgccg aaataccttg gatcttgtgc ggaccaggtg cttcaccaga
     4621 taagacagct gattcatcag cttcgacagc atagatagca atatctggat ttgctgtctt
     4681 caaaacatgc gaaacacctg aaacggtacc accagtacca acgccagata caaaggcatc
     4741 taaaccagtt gtgccaaagt cttccaaaat ttcctgtcct gttgtatctt cgtgaacttt
     4801 tggattggat ggattagcaa actggaaagg aacccagcca tttttttctt cagcaatctc
     4861 ttttgctttg gcgatagccc ctttcatccc ttcgctacca ggagtcaaga caagttcagc
     4921 tccataagct tggataatct tacgacgctc aacactcatg gtttcaggca tgacgataat
     4981 caccttataa ccttttgctg ctccaaccca agcaagaccg ataccagtgt taccacttgt
     5041 tggctcaaca atagtatctc caggtttgat tgtaccagct ttttcagcat cttcaatcat
     5101 agccaaggcg atacggtctt ttacagaaga tcctgggtta aaggcttcta acttaacata
     5161 gacatccgca gatccctcag gaacaatatt atttagcttg ataataggtg tttttccaac
     5221 taattgagta atgttttgat aaatagccat atggcacctc caaataatgt tattatacat
     5281 tatatagtag aaagtcaaaa aaggataata taaaaaaact atctcgccga tagctttttt
     5341 taatagacag gtacctcaac gatgcgagag ttagcttttt ccgcggatac ctttccgtgg
     5401 taaaagtcag tgagacttgc taaggtttgt tcaaggaatt ctttatctac aaaaatcatg
     5461 gttgaaactt cagtagtaaa ctgggtatca aattcttcca gaccttgctc cgctcgccaa
     5521 ttggcaaact cttggtattg ggcataggac atgctaatgg aaatcccttc ctgctccttg
     5581 acttccacaa ccccgatttc cttgactgca ttagccacgg ctccagcata agcgcgaata
     5641 agtccgcctg ccccgagttt gatacctcca aaatagcggg taaccaccgt tgcgacattg
     5701 gtcagttcgt gattttctaa aaccgtcagc attggcacac cagcagtacc agatggctct
     5761 ccgtcatctg aggaacgctt gatttccata ttttctccga gaacaaaggc agagcagtta
     5821 tgggtggcct tgtaatgttc ttttttgatt ttgttgataa agtcgcgagc ttcttcctca
     5881 gtagtcactc gtttcataaa acagataaat cgtgactttt taatttcttc ttcaacaata
     5941 ccatcttctc taattgtttt aaattctttc ataaccaaat tgtactaatt ttttttaaaa
     6001 ctgacaagaa attccgaata aataagtgat gaaagaatta gaaaattatt atggaagatt
     6061 atttaccaaa taccaattga cagcaaaaga aagagaaata gcagaaaaag tgccaagtat
     6121 tacaaaaaag aataactgct ttcgctgtgg aacaactttt gaagaagaaa acaaattgcc
     6181 aaacgatgct tattactgtc gagcctgctt gcttctaggt agagtgcggt cagacgaaaa
     6241 actctatcat tttcctcagg aagattttcc aattactaag tgtttaaagt ggaaaggtca
     6301 attaactgat tggcaacaaa gaatttcaga tggactagtt gcaaacgtgg aaaataatcg
     6361 tgcgacattg gttcatgcag taacaggagc aggtaagaca gaaatgatct accacaccgt
     6421 tgcctcagtg attgataaag ggggagcggt ttgcctagcc agtcctcgaa ttgatgtttg
     6481 tatagaactc tatagacgtc tgcaaaacga cttttcagtt ccaattagtt tactgcatgg
     6541 agagtctgaa ccctatttca gaactccatt agttgtagca accacacatc agttattaaa
     6601 attttatcag gcctttgatt tggttttgat tgatgaagta gacgcctttc cctatgcaga
     6661 taatcccatg ctctatcgag cagcagataa tgcggtcaag gaagccggtg ttcaagtttt
     6721 tctgacagcg acttcaacag atgaattgga taaaaaagtc agaacaggca aattaaaccg
     6781 tcttagtttg ccaaggcgct ttcatggcaa cccacttgtt gtcccgcaaa aagtctggtt
     6841 tagtaaattc gatgataccc taaagaaaaa tagactagtt ccaaagttga aaaaagcgat
     6901 tgaagaacag agaaagtcgg gcttcccctt actcattttt gtcccagaaa tctctaaagg
     6961 tcaagaattt accaagataa tgaaaaaaac gttcccagaa gaaacaattg gctttgtatc
     7021 cagtcaaaca gaaaatcgcc ttgaaatagt tgaagggttt cgcaagagag aaatcacagt
     7081 cttaatttcg actactattc ttgaacgtgg ggtgaccttc ccatgtgtgg acgtctttgt
     7141 tgttcaagcc aatcattacc tctacacagc gtcaagtcta gtgcagattg caggtcgggt
     7201 tggtaggagt atggaacgtc cgactggttt actccagttt tatcatgagg gaagtacagg
     7261 agccattgaa aaggcaatcg ctgaaattaa acagatgaac aaggaggctg gttatgtcta
     7321 attgtctatt gtgcggtcaa gctatgaaaa ataaaacaag attttcagat ctcatcttct
     7381 ttagtaaaga aaaatcgggc atctgtgaag aatgtttttc gacttttgag gaaatagcag
     7441 agcaacactg tccacattgt tataaaaatg gagaatcgga aagttgcaag gattgtcagt
     7501 actggcagaa tcaagggaaa ccagttgttc atacagcttt gtaccaatat aatcaagcga
     7561 tggcacatta ttttagtcgc tacaaatttc aaggagacta tgttttaaga aatatttttg
     7621 ctaaaaagct tagaatagcg ttaagccagt ttcctgacta cacaattgtt cctataccaa
     7681 ttagtcaaaa acgactatca gaacgcggtt ttaatcaagt ggaaggactt ttgaatgcta
     7741 caaatattcc ctatcagtcc cttcttggaa agtatgaaag ccaaaaacaa tcatctaaaa
     7801 atcgtgcaga gagactagaa gcaaaacaga tgttctatct attagatgaa aaagaagtgc
     7861 cagaaaaaat attattattc gacgatatat atacaacagg agccacaatc caacttgctg
     7921 tagaactttt catgaaaatt ggtaggaaag aaatcaaaac attttcacta acacgatgag
     7981 aaaacggttg caatattctt ataatgtggt ataataatag tgaagaaagg cgaaagccaa
     8041 gaaagaggta ctaaatatga ttaaattcag tattcgtgga gaaaaccttg aagttacaga
     8101 tgcacttcgc acctatgtag aagagaaagt ggctaagatt gagaaatatt tcaatgaaga
     8161 acaagagttg aatgctaaag taaatctaaa agtttaccgt gacaagcgcg caaaagtaga
     8221 agtgacaatt ccagttggag cagttacact tcgcgcagaa gatatttcac aagaaatgta
     8281 tggctctatc gatcttgtag tagataagat tgaacgtcaa attcgtcgta acaaaaccaa
     8341 gattgaacga aaacatcgtc aaaaagtggc aactggtcaa gtctttacag atgaacttgt
     8401 tgagcaaaca ggtgaggaag taaaagtggt tcgtactaag caagtagact tgaaaccaat
     8461 ggatatggaa gaagcagtcc tacaattgga gttgctcgga catgatttct ttatctatac
     8521 agatgctaat gacggcacaa caaatgtatt gtatagacgc gaagatggag atttaggtct
     8581 tctagaggta cgtcaataag gataataaaa cagttgcagt ttttgcagct gttttattat
     8641 tttcaaaaaa ccggttgaca aagtatataa gtcgtgatag aatgattgag ttgtctcttg
     8701 aagggctagt taacagagga acgaaaaaaa gtttcgaaaa agtgttgaca agaccatcag
     8761 aagatgatag aatgattgag ttgtctcttg aggaactggt taacagaggg acg
//
LOCUS       DASFQS010000087         8629 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.089, whole genome shotgun sequence.
ACCESSION   DASFQS010000087 DASFQS010000000
VERSION     DASFQS010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8629
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.089"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            237..1598
                     /locus_tag="U1041_001775"
     CDS             237..1598
                     /locus_tag="U1041_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEM4768868.1"
                     /translation="MKLTLHEVAQVLGAKNDISPYPDTALNKVEFDSRLITEGDLFVP
                     LKGARDGHDFIPVAFENGCAVTLSEVSIDVPHILVENCLAALQQLAAYYLEKTGVEVI
                     AVTGSNGKTTTKDMIHDVLATTYKTYKTQGNYNNEIGLPYTVLHMPDETEKLVLEMGQ
                     DHLGDIHLLSEIAKPSLSVITLFGEAHLEFFGSRAEIAKGKLQIADGMESGSKLLIPA
                     DPIADKLLPSHVELIRFGEQADLQVTSLVESKDSLTFTVNFMDGDIFLPVTGKYNATN
                     AMVASYVGKTLGVPDEATKSALASLNLTRNRTEWKKAANGADILSDVYNANPTAMRLI
                     LETFSSIPANEGGKKIAVLADMKELGSQSVDLHNQMILSLSPDLLDTVIFYGQDIEGL
                     AQLASQMFPIGKVYFFRKNAEQDQFEDLVKQVKEVLGGQDQILFKGSNSMNLGKVVEA
                     IEK"
     gene            1689..2387
                     /locus_tag="U1041_001776"
     CDS             1689..2387
                     /locus_tag="U1041_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02206 family membrane protein"
                     /protein_id="HEM4768869.1"
                     /translation="MSDFFSNQISEAPNLNVLEHLFLMIIWFFMLHLCFRCYQKRWFH
                     IVFWWLQFIQIVSLYTWYIVADFPLSESLPFYHCRLAMLFILWAKPGPLKRYFAYMGL
                     FGSLSAFIHPVFDPFAFPHLTFFTFVIGHYALTVNCMLYLLSDLEGEMLKGKEVVKYT
                     LIMNMLILGVALLIGGNYGFLRQTPLVNSTNLPLNFFLVTCLLCFSILSIQAMLIAYL
                     KKESKQMNSQILKK"
     gene            complement(2678..5014)
                     /locus_tag="U1041_001777"
                     /pseudo
     CDS             complement(2678..5014)
                     /locus_tag="U1041_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298878.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
     gene            5257..6801
                     /locus_tag="U1041_001778"
     CDS             5257..6801
                     /locus_tag="U1041_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEM4768870.1"
                     /translation="MSLQEEIKKRRTFAIISHPDAGKTTITEQLLYFGGEIREAGTVK
                     GKKTGNFAKSDWMDIEKQRGISVTSSVMQFDYAGKRVNILDTPGHEDFSEDTYRTLMA
                     VDAAVMVVDSAKGIEAQTKKLFEVVKHRNIPVFTFINKLDRDGREPLDLLQELEEVLG
                     IASYPMNWPIGMGKSFEGLYDLHNKRLELYRGDERFASLEEGDKLFGSNPFYAQVLED
                     IELLAEAGNEFSEQAILDGDLTPVFFGSALTNFGVQTFLDTFLEFAPEPHGHKTTTGD
                     VIDPLNKDFSGFVFKIQANMDPRHRDRIAFVRVVSGEFERGMAVNLPRTGKGAKLSNV
                     TQFMAESRENVENAVAGDIIGVYDTGTYQVGDTLTVGKNKFEFEPLPTFTPEIFMKVS
                     AKNVMKQKSFHKGIEQLVQEGAIQLYKNYQTGEYMLGAVGQLQFEVFKHRMEGEYNAE
                     VVMTPMGKKTVRWIKPEDLDERMSSSRNILAKDRFDQPVFLFENDFALRWFADKYPDV
                     ELEEKM"
     gene            6896..7714
                     /locus_tag="U1041_001779"
     CDS             6896..7714
                     /locus_tag="U1041_001779"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768871.1"
                     /translation="MAEYMVHTRGEVTKVDEERHTYIITANSQEEAALLAKNAFSEMY
                     GSSPENIVASSSMVNRNLKGWLAVILLSIAIFLSFRNWFVGDSTEAVVFKPNLIGGIY
                     ATFIYGAYLVRFKGVHELFHSILDTALLIVNIVTLSGIINMLLITERFSVLGIGFPID
                     THYVIIFAILISWIGLKSISGVCLIVVILLGMLKLVTINAAMGNMGILYVLSVTLGVL
                     LYASIDPSIIDAMPFFYSSFEKQSRWVKSDISSFQDTSTMVGKQLLKKSKKGKR"
     gene            7724..8149
                     /locus_tag="U1041_001780"
     CDS             7724..8149
                     /locus_tag="U1041_001780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768872.1"
                     /translation="MSKKSIFKGLFVVFLSLSVGACAKNSNQTAEQNEENGRYVTVIN
                     KTGEVIKDLTILADEGTEVTSETDPYSSDTDSISIEIPKDYEEHSDFTIVLTSRHDYE
                     YTVKKTIEDPNGRVEVTVKEDDKTKDGNWLDKLFNDSKE"
     gene            8210..8593
                     /locus_tag="U1041_001781"
     CDS             8210..8593
                     /locus_tag="U1041_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM4768873.1"
                     /translation="MGLFSGLMGNASQMNNDKVEQELADILLDAEQVEMAFSLVRDLI
                     VFTQYRLILVDKQGISGKKVAYKSIPYRSISRFTVETSGHFDLDAELKIWISSAAEPA
                     ETLQFKSDKSVIAIQKALAAAVLGK"
BASE COUNT         2547 a         1616 c         1975 g         2491 t
ORIGIN      
        1 ctgtctggga gacagtttga ggttggaaat aaagcgaaca cagttcgcat cagtagttag
       61 gacagatttg gagtgtgata cacgaacagc tgaaatttgc ttcgcaaatc ctatctccaa
      121 cctttaatag tccactggac tattaaagca aatcaaccac tgcgctgaga tgttgactca
      181 aactttgaga aacggtggtg ggggtgaaac tagcctttag tttattggag aaaacaatga
      241 aattaaccct acacgaagtc gctcaggtct tgggcgcaaa aaatgatatt agtccttatc
      301 ctgatacagc actcaacaag gtcgagttcg acagtcgcct gattacagaa ggggatcttt
      361 ttgttcccct caagggagcg cgtgacggtc atgactttat tcctgtggct tttgaaaatg
      421 gctgtgcggt aaccctgtct gaagtcagca ttgatgttcc tcacattcta gtagagaact
      481 gcttggctgc gcttcaacaa ttagcggcct actacctaga gaaaacaggg gtagaagtca
      541 ttgccgtaac aggatcaaac ggtaagacga ccaccaagga catgattcac gatgttctgg
      601 cgacgactta caagacttac aaaacacaag gtaactataa caatgaaatc ggcctgcctt
      661 acaccgtcct tcatatgcca gatgagacgg aaaaactggt cttggaaatg ggccaagacc
      721 acttggggga cattcatctc ctatccgaaa ttgccaaacc aagtctatcg gttattactc
      781 tatttggcga agcccatctg gaatttttcg gctcacgagc agagattgcc aaagggaaat
      841 tacagattgc agatggaatg gagtcaggta gtaaactttt gattccagcg gatccgattg
      901 cggataagct cttgccaagt catgtagaac tcattcgctt cggtgaacag gccgatttgc
      961 aggtgactag tctggtcgag tcaaaagata gcctgacctt caccgtcaat tttatggacg
     1021 gcgacatttt cctcccagta acgggtaagt acaatgccac caatgccatg gtagcaagct
     1081 acgtaggtaa gaccttgggt gtgcctgatg aggcaaccaa gtcagcccta gctagtctaa
     1141 acttgacccg caaccgcacc gagtggaaga aggcagcaaa cggagcagat attctcagcg
     1201 atgtctacaa cgccaaccca acggctatgc gtttgatttt ggaaaccttc tctagcattc
     1261 ctgcaaacga aggcggcaag aaaatcgctg ttttagcaga tatgaaagaa ctggggagcc
     1321 agtccgttga tctccacaat cagatgattc tgagcctgtc gcctgatctg ctagacaccg
     1381 tcattttcta cggtcaggac attgaaggtc tggcccagtt ggctagtcag atgttcccga
     1441 ttggaaaagt ctatttcttt aggaaaaatg cagagcagga ccaatttgaa gacttagtca
     1501 aacaagtcaa ggaagttctt ggcggccaag accaaatcct ctttaaaggg tctaattcca
     1561 tgaatcttgg gaaagtggtg gaagcaatag aaaagtagag aggcaagacc tctctttttt
     1621 agcaagtctt gtcaaaacat cgaaaagttg atatactaac ttttggggaa agagaggaat
     1681 ttaataagat gagtgatttt tttagcaatc agatttctga agcaccgaac ctgaacgtat
     1741 tggaacacct gtttctcatg attatttggt ttttcatgct ccatctttgt tttcgttgtt
     1801 atcaaaaaag atggtttcat attgtttttt ggtggcttca atttatacag attgtctccc
     1861 tttatacttg gtatatcgta gctgattttc ctctttctga gagtcttcct ttttatcatt
     1921 gtcgcttggc tatgcttttt attctttggg cgaagcctgg acctttgaaa cgttattttg
     1981 cctatatggg tctttttgga tcgctttcag cctttattca tccagtattt gacccatttg
     2041 catttccaca tctgaccttc tttacttttg ttattggtca ctatgccttg acggttaatt
     2101 gtatgttgta cctgttatct gatttagaag gggagatgtt gaagggaaaa gaggtagtga
     2161 aatatacgct tattatgaat atgctgattc taggagtagc tcttttaatt ggcggaaatt
     2221 atggattttt gagacagaca cctttagtga acagtaccaa tcttcctttg aatttcttct
     2281 tggtaacctg cctactctgc ttctctattt tgagtataca agctatgtta attgcctatt
     2341 tgaaaaaaga aagcaaacaa atgaattcgc agatattgaa aaaataaggg agcgggaaag
     2401 aactcgactg gtcaaaaaga gttcgtcaac aatttttcgt tttaagttgt tgagctgaaa
     2461 cagtctatcc ccagactgtt tcactcccac ccccgcatag ctccaaaggt ttggggaacc
     2521 tttggaggtc ggagatagag cgaacagagt tcgcatcagt cgtataggtc agatttggag
     2581 tgtaaaacac gaacaaatct gtcaatcaac cactgcgctg agatgttgac actaacgttg
     2641 agaagcgagg ttggtctttt tgcccagcct cttattttta gtttttaaat gcgccttgtt
     2701 tgtagctaat ccagaaaaag acagggataa aaatgagcat taatccagaa tagattggca
     2761 atgtgtgact gtttaggggg tggatttcaa tcagaccatg taggaaatgg gagctgatga
     2821 agtaaccgaa aacggaataa ataataagag ccagtcgagc ttttgtcagt ggcaaacagg
     2881 cacgaatgac agccagtaga cctgttgaac caagaacata ataagagagg gtttgcatgt
     2941 catgcaagtt taagtatcca aatacttgca ttaaatggaa aataaggaca ctgagaacaa
     3001 ccatgagagc atttggtagg gctaagagaa gagattttct gagaaaatgt ttttctacgg
     3061 ggcggatatt tcgttcaaaa gttaggataa aaggaggaaa accttcaaca aattgaccaa
     3121 tgagggtcat ttgtacttga ataaatggga aaactaacaa atattctgct ttacctaggg
     3181 caatactagc gatacagata aggccaagta agaaagagta gattgttttg ataagaaaga
     3241 tgggagcaat gtgggagatg ttattaacaa cgcgtcgtcc ctcaaagaga atctcaggaa
     3301 tatcgcgaaa ttcagaatct aggaggacta gattagcgat ttgtctagta gcgggatcgc
     3361 cttctgccat aacaatggaa cagtcagctt cgcgtagtgc aagaatatca ttgaccccat
     3421 caccggtcat tgcagtagta tgtccctgta ctttgagagt ttggatgagc aattttttct
     3481 gatgtgggga tacgcgaccg aaaatggcgg ttgtttcagc tctggcaatt agttcttcgt
     3541 cgtcaacttt ggaacaatcg atatagctat cgaagtcagc aaatccagct tccctggcaa
     3601 tgtgtgagac cgtcacagga ttgtcaccag agattatttt tagtgtcact tcttgcgagc
     3661 gaagataggc tagtgtttct gcggcgtctt ctcggattgg atcggcaatt tctaatagag
     3721 ctagaggttc aatattctca ggtagctgat tttgagaaga aggaagggac tgttggctaa
     3781 gcgcaagaat caggacacgg gaaccacgag cctgtgcctc agaaacagaa ggaggatttt
     3841 gtgttagtaa catttctggt gcccctagaa aaatgtgacc aatgttttct attgtcattg
     3901 ccccccattt tctatcacta gaaaatggga tgatgtgact agctttatag tggtgctcta
     3961 aatcaccata ttcttttcga atggcctgag ctgttgaatt agtatcctca cttgtctgga
     4021 tataggtagc gagtatctgt tggatagtgt caagtgaata atggttggtt aaggggagca
     4081 ggtttgcgac ggtcattttc ccctgagtaa tcgttccggt cttatccaaa caaagaacat
     4141 caactcgggc aagtgtttcg acggaataca tttcttgtac gaggacattt ttcattccca
     4201 gtttgataac ggcagttaag agagaagtga tggtcagcag agcaattccc tttggtaaca
     4261 tacccagtag ggcagtagag ctggtaataa ctgagtcttt taagggaaga agtttgatga
     4321 aaaaggcttc tagaaaaaga gcaagtccga atggaatgat aatttttcct gtaaatttag
     4381 caattttatc catattgtaa agaatacgag agacgatagg tttgtgagtt ttcgcctcaa
     4441 gcatgagctt attggcatag ttttctgcgc caacatggat gacttttgca taaatctgtc
     4501 cgctaactag atagctacca gacaataatt cagccccagt atttttcaca atcaagtcgc
     4561 tttcaccggt taacatggcc tcgtttgtct cggctatacc ttctaaaaca atagcatcac
     4621 taggaacttg ttcgccagca gacagcaaga gaacatcatc taaaacaata tcttctggtg
     4681 caagagagat tgtctcactg tcacgaacaa ctcggataaa atccttgttc atcaggttga
     4741 gtttgtcaat cattcgtcgt gctcgccatt ctgtcagcat tcctgaaaca gcgttgagga
     4801 caataactca gaagaagaaa aggttggacc atgcctgtac agctagtaag gctaagaaaa
     4861 tggcaaaatt gagtgcgtta aaagatgtaa acacatttcg tctgaagatt tcccaattac
     4921 tggcactggt ctttgtctta aaatgattgg tttgctggtt ttgaatacgt tcttgtactt
     4981 ccttggttga taaacctttt atttgtttgt tcattatttt atctttcttt ttctagtata
     5041 tagaatacat ctcatactta ttgtaacaca tttataatac aacagtatag gtctgtagac
     5101 ctattcttca atagtttgaa aaattccctt atttccgata taataagaga gttgtctagt
     5161 aaagaataag gatgaatcca atgtaaatcg aataggataa gagctcagct ctgctatgta
     5221 tcaaaaaaaa gaataagaaa aagaaaagga aacattatgt cactacaaga agaaatcaag
     5281 aaacgccgca cctttgcgat tatctctcac ccggacgcgg gtaagaccac tattaccgag
     5341 cagttgctct actttggggg tgagattcgt gaagcaggta cggtcaaggg gaaaaagact
     5401 ggtaactttg ccaagtctga ctggatggat attgagaaac aacgtggtat ctctgttacc
     5461 tcatctgtta tgcagtttga ctacgcaggc aagcgggtca atatcctaga tacaccaggg
     5521 cacgaggact tctcagaaga cacttaccgt accttgatgg cggtggatgc ggctgtcatg
     5581 gtggtggact ctgccaaggg tatcgaggcc cagaccaaaa agctctttga ggtcgttaag
     5641 caccgcaaca tcccagtctt taccttcatc aacaagttgg accgtgacgg tcgtgagccg
     5701 cttgatttgt tgcaggaatt ggaagaagtc ttgggcatcg ctagctaccc gatgaactgg
     5761 cctattggta tgggaaaatc cttcgaggga ctttatgacc tccataacaa acgcttggag
     5821 ctttaccgag gtgatgagcg atttgcgagt ctggaggaag gcgacaaact ctttggctca
     5881 aatccttttt acgcacaggt cttggaggat atcgaacttc tggcggaagc tgggaatgaa
     5941 ttttcagaac aggcgatttt ggacggtgat ttgacccctg ttttcttcgg atccgccctg
     6001 acaaactttg gtgtgcaaac cttccttgat accttcttgg agtttgctcc agagccacac
     6061 ggtcacaaga caacgacagg ggatgtcatt gacccgctca acaaagactt ttcaggcttt
     6121 gttttcaaaa tccaggccaa catggaccct cgtcaccgcg accgtatcgc ctttgtccgt
     6181 gtggtttcgg gcgaatttga acgcggtatg gcggtcaacc tgcctcgtac aggaaaggga
     6241 gccaagttgt caaatgtgac ccagtttatg gccgagtccc gtgagaatgt ggaaaatgca
     6301 gtagcggggg acattatcgg ggtttacgat acaggaacct atcaggtagg agataccttg
     6361 accgtaggca agaacaagtt tgagttcgaa ccgctgccga cctttactcc tgaaattttc
     6421 atgaaagtgt ctgctaaaaa cgtcatgaaa caaaaatcct tccacaaggg aatcgagcaa
     6481 ctggttcaag aaggagctat ccagctctac aagaactacc agacaggcga gtatatgctg
     6541 ggtgccgttg gtcagctcca gtttgaagtc ttcaaacacc gcatggaagg tgagtacaat
     6601 gctgaggtag tcatgacccc aatgggtaaa aagactgtcc gctggatcaa gccagaagac
     6661 ctggatgaac gcatgtcatc aagccgcaac attctagcca aagatcgctt tgaccaaccc
     6721 gtcttcctct ttgaaaacga cttcgccctc cgctggtttg cggacaagta tccggatgtg
     6781 gagttggaag agaagatgta gaaaaggaat ggaacttcca tttctttttt cattttgaca
     6841 gattgtgaat tgaattgtat aataaatgtg taatgaaaga aaggtgagat tacttatggc
     6901 tgaatacatg gttcatacaa gaggtgaagt gactaaagtt gatgaagaga gacatactta
     6961 catcattaca gcgaacagcc aagaagaagc agctttgctt gctaaaaacg ctttctctga
     7021 aatgtatgga agttcacctg aaaatatagt tgcctcctcg tcaatggtta atcgcaatct
     7081 gaaaggctgg ttagctgtta tcttactctc aattgcaatc tttttatcat ttcgtaattg
     7141 gtttgttgga gactctacgg aagcagttgt atttaagcct aatttaattg gtggaatcta
     7201 tgccaccttc atttacggtg cataccttgt tcgattcaaa ggagtgcatg aattatttca
     7261 ttctatttta gacacagcac ttcttattgt aaatattgtt actttatcag gaattatcaa
     7321 tatgttattg ataaccgaga gattttccgt tttaggtatt ggttttccta ttgacacaca
     7381 ttatgtgata atattcgcta tacttatttc ttggattgga ttaaaatcta tcagtggtgt
     7441 ttgtttgata gttgtaatcc ttctgggaat gctgaaattg gtaacaataa atgcagctat
     7501 ggggaatatg ggaatattgt atgtgctatc ggttaccctt ggtgttctct tatatgctag
     7561 tatagatccg agtatcattg atgcgatgcc atttttttat agctcctttg agaaacagag
     7621 ccgttgggta aaaagtgata tttcttcatt ccaagataca tcaactatgg ttggaaaaca
     7681 acttttgaaa aagtcaaaga aaggaaaaag gtaaagctta aaaatgagta agaaaagtat
     7741 ttttaaagga ttattcgtag tttttttatc actgtcggta ggtgcttgtg caaaaaatag
     7801 taatcaaaca gcggagcaaa atgaggaaaa tggacgctat gtaaccgtta tcaataagac
     7861 tggtgaagta attaaagatt tgactatttt ggctgatgag gggacagaag ttactagtga
     7921 gacagatccg tattcatcag atacagatag tatcagtatt gaaattccta aagattatga
     7981 agaacattca gattttacta ttgtattaac ctcgcgccat gattatgaat atacggttaa
     8041 aaaaacaata gaagacccaa atgggcgagt tgaagtaacg gttaaagaag atgataaaac
     8101 caaagatgga aattggcttg ataaactttt taacgacagt aaggagtaag attctgacta
     8161 gagtggttta tctttcggat ttttaagaat aggcataagg agtaaacaaa tgggtttgtt
     8221 ttcaggtttg atgggcaatg cctcgcagat gaataatgac aaggtagagc aggaattggc
     8281 agacatcctt ctggatgcgg aacaggtaga aatggccttt agtttggtcc gcgacctaat
     8341 tgtctttacc cagtatcgtt tgattttagt agataagcaa ggaatttcag gtaagaaggt
     8401 agcctataag tctattccct atcgttcaat ctcgcgtttt acggtcgaaa cctctggcca
     8461 ttttgacttg gatgctgaat taaaaatttg gatttcttct gcggcagaac cagcagaaac
     8521 tcttcagttc aagagtgata agagtgttat tgctatccaa aaagctctgg ctgcggctgt
     8581 tttgggaaaa taaattgtta gaaagaatgt tggaatctta tccagcatt
//
LOCUS       DASFQS010000088         8604 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.090, whole genome shotgun sequence.
ACCESSION   DASFQS010000088 DASFQS010000000
VERSION     DASFQS010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8604
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.090"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            11..118
                     /locus_tag="U1041_001782"
     CDS             11..118
                     /locus_tag="U1041_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019773529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
                     /protein_id="HEM4768874.1"
                     /translation="MTAFEVVQTILGFSSFTIALIGLCYKIFKDGDKKK"
     gene            complement(441..1502)
                     /gene="pepA"
                     /locus_tag="U1041_001783"
     CDS             complement(441..1502)
                     /gene="pepA"
                     /locus_tag="U1041_001783"
                     /EC_number="3.4.11.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl aminopeptidase"
                     /protein_id="HEM4768875.1"
                     /translation="MTLFEKIKEVTELQSLPGFEGQVRNHIRQKITPHVDRIETDGLG
                     GIFGIKDTAVENAPRILVAAHMDEVGFMISQIKPDGTFRVVELGGWNPLVVSSQAFTL
                     QLQDGRTIPAISGSVPPHLSRGANAPGMPAIADIIFDAGFANYDEAWAFGVRPGDVLV
                     PKNETILTANGKNVISKAWDNRFGVLMVTELLENLSGQTLPNQLIAGANVQEEVGLRG
                     AHASTTKFNPDIFLAVDCSPAGDIYGDQGKIGEGTLLRFYDPGHILLKNMKDFLLTTA
                     EEAGVKFQYYCGKGGTDAGAAHLKNHGVPSTTIGVCARYIHSHQTLYSMDDFIEAQAF
                     LQAIVKKLDRSTVDLIKNY"
     gene            1644..1748
                     /locus_tag="U1041_001784"
     CDS             1644..1748
                     /locus_tag="U1041_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008474265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Fst family toxin"
                     /protein_id="HEM4768876.1"
                     /translation="MIALLFELLTLFVAPIVSGLVLILFEYWLNNRNK"
     gene            1948..2250
                     /locus_tag="U1041_001785"
     CDS             1948..2250
                     /locus_tag="U1041_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4651 domain-containing protein"
                     /protein_id="HEM4768877.1"
                     /translation="MKKKKTALLAGLLGAGVLTASAQFYRKIQEDRKKAQALQEVRDF
                     FADLGEIATVYVDETASTRDQLIGGVVMEAGQVFLFENTKGSIQYREEEDDFSNKS"
     gene            2228..2548
                     /locus_tag="U1041_001786"
     CDS             2228..2548
                     /locus_tag="U1041_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM4768878.1"
                     /translation="MIFPTNLEEVAALIEDGKPTVFLFVTTWCGDCHYIKPHLPAIEE
                     AFPDFRFVQLDRDDFMPLAQEWAILGIPSLVVLENGKEIGRFVDKNRKTKEEIMNFLA
                     GLGS"
     gene            2592..3548
                     /locus_tag="U1041_001787"
     CDS             2592..3548
                     /locus_tag="U1041_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1002 domain-containing protein"
                     /protein_id="HEM4768879.1"
                     /translation="MKKSLGKILLAPVVLGLSLSLAPLVQAEIQTDVINEKWGKPTLV
                     YGGGLSDAQATEVNNLFGISDVNNVSRQVVVGADMDQYLGTSGADTASLYSSVLVQKQ
                     DTGKGVVVDIKTPQNITLITETQYANAAITAGATDVLIDVAAPIQVTGESALTGVYKA
                     LAANGETVDTARTEVAQQELETVNEVATAHTGDTNFDSSALDKAVAEIKTALADYKKS
                     NGQVASESDINTMINDVLANNGLENVITVDEISKLVTFAKAYQETSAIDSAEVAAQLN
                     QFKQQAEQQISEAYKNLQDSGILEKIGAFFENLWKGLTGLFA"
     gene            3567..4190
                     /locus_tag="U1041_001788"
     CDS             3567..4190
                     /locus_tag="U1041_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011284429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 and tRNA-binding domain-containing
                     protein"
                     /protein_id="HEM4768880.1"
                     /translation="MIFTYNKEHVSDVLMVIVAEDKGQTVQFERKGQVARVFLEETGK
                     TVAWNIFEASSLVELAGNGQVFLTDEQVATLNAELAKEGFTESLVNDNSPKFVVGQIV
                     ELVPHPDSDHLNICQVNVGDKTVQIVAGAPNVAQGLKTIVALPGAMMPSGSLIFPGKL
                     RGEDSFGMMCSPRELALPNAPQVRGIIELDDSAVVGEAFDPAKHWKG"
     gene            complement(4225..5004)
                     /locus_tag="U1041_001789"
     CDS             complement(4225..5004)
                     /locus_tag="U1041_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2785 domain-containing protein"
                     /protein_id="HEM4768881.1"
                     /translation="MKEFLMEKIQTSQPYTNAELAWLLENIGHPDPAIRDELVYASFC
                     HIFLEGLITREQAQSLLQFSQETNPLSLESSILKRSFTCLLYCLLLSVDNESESIYHA
                     FLSTNDRELLFQQALNYLTIEHDWSGYDEKLGWIHTAAHGADFLLTASCHDQFPAEKS
                     KEVWQTIVTCLTKQSKVFSAGEEIRLAQIPVYLLLNEKVSSQELTEWISKLDFPNQEP
                     VDYFRWLNLQHFLSSLYFQLRSHQALTEEIGQAIENRIETA"
     gene            complement(5100..6518)
                     /locus_tag="U1041_001790"
     CDS             complement(5100..6518)
                     /locus_tag="U1041_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000859011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4768882.1"
                     /translation="MITTNKVAIYVRVSTTSQMEEGYSIDEQTDKLKSYCEIKDWTVY
                     NIYTDGGYTGSNTSRPALEQLIKDAKEKRFDTVLVYKLDRLSRSQKDTLYLIEDVFIK
                     NNIDFLSLQENFDTSTPFGKAMIGLLSVFAQLEREQIKERMQLGKLGRAKSGYSMMWT
                     NPPFGYRIAKGEKVVSTNPTQAVIVSRIYSEYISGKPLSKILSSLNDEGHVGRNKPWS
                     LTTIKDILKNPTYCGKVRFQGQLFDGLHVPIISEEDFELAQLELKRRQDETYSRTNNT
                     RPFQAKYMLSGLLKCGYCNSTLRVYVARKRKDGSYPPLKYQCGNRFAKDTEKRCNSKQ
                     YDKAELEHTVISKLSQLKLERRIDTEQIKPIDKSEIKRELQSISTKLNRLAELYIDGI
                     IDREELQKRKTALEKQKILLEDELSIDHDELIQRRKQSIIDELEKINIASSTYEEQTS
                     IVRKIVKGIIIKPGVVDIQLDI"
     gene            complement(6650..7435)
                     /locus_tag="U1041_001791"
     CDS             complement(6650..7435)
                     /locus_tag="U1041_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768883.1"
                     /translation="MNTEQLAIYIGEKIRIYRKQKGWTQQELGEEIGMSKNAIGNYEK
                     GFRSPKKDTLFKLANAFDISIDDLFPPIDKSSQPTNPQVEVIPSTLQKVTHTTSQLEH
                     KRQLVVLDTAEKQLEEQNTVENSKNIVADNIIQFPKLFPYDFYDQPASAGTGQYLNDV
                     QVEQVELPIEVNADFVIPIYGDSMEPEYHSGDYVFVKLTYDLSNGDIGVFEYYGDAYI
                     KQLVIDDSGAFLHSLNNKYDDLPVDSDSDFRIIGKVVGNYSEK"
     gene            7873..8109
                     /locus_tag="U1041_001792"
     CDS             7873..8109
                     /locus_tag="U1041_001792"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768884.1"
                     /translation="MNELEKTALNEILRTVTYIAERVDRLGEQLYPHLTETDKKEVLA
                     LINDALSKGRGISDNNLDGVKFQSNTPQGIEGVR"
     gene            complement(8102..>8604)
                     /locus_tag="U1041_001793"
     CDS             complement(8102..>8604)
                     /locus_tag="U1041_001793"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768885.1"
                     /translation="LHLQEINEHSQVIYQLGHELLHAYYKSPSNTPMFWFEEVLCEVA
                     SHLFLQGFVKEWSNSVNALVRGFADFTLDYSNSQLQESEPVNLKQLPLDYLKDNPTGN
                     RKINTYIAAIMLPIFQGRPDFLAECRKLSALYTETSLNTFFYKAYSLISPDYHLELKK
                     LEALFI"
BASE COUNT         2483 a         1633 c         1889 g         2599 t
ORIGIN      
        1 gggcgttctt ttgacagctt ttgaagttgt acaaactatt ctaggcttta gtagttttac
       61 tattgcattg attggcttgt gctataaaat cttcaaagat ggagacaaaa agaaatagcc
      121 gtccatactt tggcaagtaa cggctatttc ttttagaaat taaaatacga gccaccgtct
      181 ttttaacggt tctacatggg gttggattgc cgtccaactc cttttctatt ttcattatat
      241 cagattactt gtaaaatgca aacgctatgt tgactttggt gcttcgttca ctttaggttt
      301 gtttctcaca gtaggctcag acttatcggt gaatgccaaa atatgacgat acaggttaga
      361 gagcgtttac tgctatgtta ttttttacta gttgggtaga ctcagcgatt atagggtact
      421 tcttcgcttt gcataactgt ctaataattc ttgatcaaat caaccgtcga acggtctagc
      481 tttttaacga tggcttgtaa gaaggcttga gcctctatga agtcatccat gctgtagagg
      541 gtttggtgag aatggatgta gcgagcgcag acaccgatgg ttgttgatgg aacgccatga
      601 tttttcaagt gagctgcacc agcatctgtt ccacctttac cacagtagta ttggaatttg
      661 acaccagcct cctcagcagt cgtcaagagg aagtctttca tattttttaa taggatatgt
      721 ccaggatcat agaaacgaag tagggtaccc tccccgattt ttccttggtc gccataaata
      781 tcacctgcag gcgagcaatc aacagcaagg aaaatgtctg gattgaactt ggttgtagaa
      841 gcatgagctc cacgaagacc aacctcctct tgcacatttg ccccagcaat caactgattt
      901 ggcaaggttt gccccgatag gttttctagc agttcggtta ccataaggac gccgaagcgg
      961 ttatcccaag ccttggaaat aacatttttt ccgttggctg ttagaatggt ttcgtttttg
     1021 ggaacgagga catcccccgg acgaacaccg aacgcccaag cttcgtcata attggcaaaa
     1081 ccagcatcga aaataatatc agcaatggca ggcatgccag gagcgttagc cccccgtgaa
     1141 aggtgaggtg gtactgagcc tgagatggct ggaatggtac gaccgtcctg caactgaaga
     1201 gtgaaagctt ggctagaaac aaccagagga ttccagccac ctagctcaac aacacggaaa
     1261 gtaccgtcag gcttgatttg gctaatcata aagccaacct catccatgtg agcggccact
     1321 aggatacgag gagcattttc aacagccgta tccttgatgc caaaaattcc acctagcccg
     1381 tctgtttcaa tgcggtccac atgcggtgtg attttctggc ggatgtggtt gcgaacctgt
     1441 ccttcaaatc ccggtaagct ttgcaattct gtaacttctt taattttttc aaaaagagtc
     1501 atttttcttc ctccatgaca tgattactac tattttatca cgaagagcta gacttgtctt
     1561 gaaaatatag aaaaatatgg atagtattga caagaatgct tgaaatttgc taggatagaa
     1621 atgcccctca aaatagagag gaggtgattg ccttgttgtt cgaacttctc acattgttcg
     1681 ttgcacctat tgtatcaggt cttgtgttga tactctttga gtattggctc aacaatcgca
     1741 acaaataggc cccaggggca aaagaaaacc ctcaacgctg ggaacgttgg gggctttttg
     1801 attgccgatg tattatcgaa cttctcactg taagaccatt ctatctattt ttaagtcttt
     1861 tgtcaagtgg tgcgagtttg tctcagctgt cacaagtcca atggcatttt tgggaaaaat
     1921 ccggagaaat atgataaaat agtcaacatg aaaaagaaga agacagcctt gctagcaggc
     1981 ttattggggg caggtgtgct caccgctagt gctcaatttt accgtaaaat ccaagaagac
     2041 cgtaaaaaag cacaggcctt gcaggaggtg cgtgactttt tcgctgattt aggagagatt
     2101 gccacggtct atgtggatga aacagcctca actcgtgacc agcttattgg cggggttgtg
     2161 atggaggcag gacaggtgtt tttatttgaa aataccaaag gttctattca gtacagggag
     2221 gaagaagatg atttttccaa caaatcttga ggaagtagct gccttgattg aagatggcaa
     2281 gccaactgtt tttctatttg tgacaacttg gtgtggagat tgccactata tcaaacctca
     2341 tttgccagct atcgaagagg cttttccaga tttccgtttt gtgcaactgg atcgagatga
     2401 ttttatgcct ttggcacagg aatgggctat tttaggcatt ccaagtctgg ttgttttgga
     2461 aaatgggaag gaaatcggtc gctttgtcga taagaatcgc aagaccaagg aagaaatcat
     2521 gaacttctta gctggattgg gtagttaaat tagtagagaa gttctgctat tcccaaaaga
     2581 aaggaaaaaa catgaagaaa tcacttggaa aaatccttct agcacccgtg gtgctgggat
     2641 tgagtttgag tctcgctccc ttggtgcaag ctgagattca aacagatgtt atcaatgaaa
     2701 aatggggcaa gccaacacta gtctacggtg gaggtttgtc agatgcgcag gcgacagagg
     2761 ttaacaatct atttggtatt tcggatgtca ataatgttag ccgtcaggtg gttgttggcg
     2821 cggatatgga ccaatattta ggtacatctg gagcggacac agcctctctt tactcgtctg
     2881 tcttggtgca aaagcaggac actggcaaag gggttgtggt ggatattaag acgccacaga
     2941 acatcacctt gattaccgaa acgcagtatg ccaatgcggc tattacagct ggtgcgacag
     3001 atgtcttgat tgacgttgcg gcacccattc aggtgacggg agagtccgcc ctgacgggtg
     3061 tttacaaggc tcttgcggcc aatggtgaaa cagttgatac cgctcgaact gaagtagctc
     3121 aacaggagct agagacagtc aatgaagtgg caacggctca cacaggtgac actaattttg
     3181 atagttcggc cttggataag gcagtagcag aaatcaagac agctcttgcc gactacaaaa
     3241 agtccaatgg tcaggtagct tccgaatcag acatcaatac tatgattaac gatgtcttgg
     3301 ccaataacgg tttggaaaat gtcatcacag tagatgaaat ttctaagcta gtcacatttg
     3361 ctaaagctta tcaggaaacc tctgctattg attcggctga ggtagctgcc cagctcaacc
     3421 agtttaagca acaggcggag caacaaattt cagaagccta taagaatcta caagattcag
     3481 ggattttaga aaaaatcggt gccttctttg aaaatctttg gaaaggcttg accggtctat
     3541 ttgcataaag gagaaatgaa aaagaaatga tttttacata taataaggaa cacgtcagcg
     3601 atgtccttat ggtgattgtg gctgaggaca agggacaaac tgtccagttt gaacgcaagg
     3661 gtcaagtggc gcgtgtcttt cttgaggaaa caggaaaaac agtggcctgg aatatctttg
     3721 aagcatcaag tttagttgag cttgctggca atggtcaagt tttcctgaca gacgaacaag
     3781 ttgcgacctt gaatgctgaa ttggctaagg aaggttttac ggaaagcttg gtcaacgaca
     3841 atagtccgaa attcgttgtt ggtcagattg tggaactggt gccgcatcca gacagcgacc
     3901 acctcaatat ctgtcaggtc aatgttggtg acaaaacagt gcaaatcgta gccggtgccc
     3961 caaatgttgc ccaaggttta aaaactatcg tggctcttcc gggagcaatg atgccgagcg
     4021 gtagcctgat tttcccagga aaactacgtg gtgaagatag ctttggtatg atgtgcagcc
     4081 cacgtgaatt ggctctgcca aacgcaccac aagtccgtgg cattatcgaa ttagacgact
     4141 ccgcagtggt cggagaggcc tttgatccag ctaaacactg gaagggatag aaaaagaaga
     4201 attggtcgat cttggccaat tcttttatgc tgtttcaatt ctattttcaa tagcctgtcc
     4261 gatttcttcg gtcaatgctt ggtgtgacct gagttggaag taaagactag acagaaaatg
     4321 ttggagattg agccaccgga agtagtctac tggttcttga tttggaaagt ccagcttgct
     4381 aatccattcc gtcagctctt ggcttgacac tttttcattc agcaggaggt agacaggaat
     4441 ttgtgccaaa cggatttcct cgccagctga gaaaacttta ctttgtttag ttagacaagt
     4501 gacaatagtt tgccagactt ctttgctttt ttcagcggga aattgatcat gacagcttgc
     4561 agtcagaaga aaatcagctc cgtgggcagc ggtatggatc caaccgagtt tttcatcgta
     4621 gccagaccag tcatgttcaa tcgtcaaata attcaaggcc tgctggaaga gtagttcacg
     4681 gtcgttagtg cttaaaaatg catgataaat agactctgac tcattatcga cagacagcaa
     4741 cagacagtaa agtaggcaag taaaacttcg ctttagtatg gaactttcta gggaaagggg
     4801 attggtttct tgagagaatt gtagcagcga ctgtgcttgt tctcttgtaa tcaagccctc
     4861 caaaaaaata tggcaaaaac tagcatagac cagttcgtcg cgtatagcag gatcaggatg
     4921 gccgatgttc tccaacaacc aagccagttc ggcattggta tatggttggg aggtctgtat
     4981 cttttccatc aaaaattctt tcatgatttt cgctcctttt ctaatccttc tacgaataaa
     5041 taagtaggag gatataaaat gtataataaa gttattttga tgagtttgac taaatactgc
     5101 tatatatcca attgaatgtc gacaactcca ggctttatga ttatgccttt aacaatcttt
     5161 ctgacaattg aggtctgttc ctcataggta ctgcttgcta tgtttatttt ttccaattcg
     5221 tcaattatag attgttttct tctttggata agttcatcat gatcaataga caactcatct
     5281 tcaagcagta tcttctgttt ttctaaggct gttttgcgct tctgtaattc ttcacggtct
     5341 atgatgccgt caatatatag ttcggctagt ctgtttaatt tagttgatat agattgcaat
     5401 tcacgtttaa tttccgattt gtctataggt tttatttgtt cagtatctat ccgtcgttct
     5461 aactttaatt gactgagttt ggatataaca gtatgctcta attcggcttt atcgtactgt
     5521 tttgaattgc aacgcttctc ggtatctttt gcgaaacgat tgccacattg atattttaaa
     5581 ggcgggtaac tcccgtcttt tcttttgcgt gcaacataaa ctctaagggt agaattacag
     5641 tagccacatt ttagtagacc agatagcata tattttgctt ggaaaggtct agtgttatta
     5701 gtgcgagagt atgtttcgtc ttgtctcctc ttcaattcta attgagccaa ctcaaaatct
     5761 tcttcggaaa taattggaac gtgtaatcca tcaaatagct gcccttgaaa tcgaactttt
     5821 ccacagtaag taggattctt tagtatatct ttgatagtag tcagactcca cggtttgttc
     5881 cgtccaacat ggccttcatc atttaaacta gataatattt tagataaggg cttcccagaa
     5941 atatattctg agtaaatgcg agatacaatg actgcttggg tagggttggt actgacaacc
     6001 ttttcacctt tagctatgcg gtacccaaaa ggtgggttag tccacatcat agagtatcca
     6061 gattttgcac ggcctagttt tccaagttgc atacgctcct tgatttgttc gcgctctaat
     6121 tgagcgaata ccgaaagcaa accgatcatt gcttttccaa atggagtgga agtatcaaaa
     6181 ttttcttgca agctaagaaa atctatattg tttttgataa atacatcctc aatcagatat
     6241 aatgtgtctt tttggctacg gctcagtcgg tctagtttgt aaactaggac agtatcaaat
     6301 cttttctctt ttgcgtcttt tataagttgt tcaagcgcag gtcttgaagt atttgaacca
     6361 gtatatccac cgtcagtgta aatattgtaa actgtccagt ctttaatctc acaatatgat
     6421 ttcagcttgt ccgtctgttc atctattgag tacccctctt ccatttgaga agtagttgaa
     6481 acacgaacat aaatggctac tttgtttgtt gtaatcattg tttttgtacc tcttttttga
     6541 taaaatgggt acaagaaaaa tattcaaaag atactatctt ttgaaaaata tttcttgcgt
     6601 caatgcctca tgctcggagt cgccaaactt tgagagcgtg gggagttttt tatttttctg
     6661 agtaattccc cacaacctta ccgataattc ggaagtcact atctgaatca acagggaggt
     6721 cgtcgtattt attgtttaaa ctgtgcagaa acgctccaga atcgtctata acgagttgtt
     6781 taatataagc gtcaccataa tactcaaata ctccaatatc tccgttagag aggtcgtagg
     6841 ttagttttac aaacacatag tctcctgaat gatattcagg ctccatagaa tcaccataaa
     6901 ttggaataac aaagtcagcg ttcacttcaa taggtaattc gacttgctcc acttgtacat
     6961 cattcagata ttgtcctgta ccggcagaag caggttggtc gtagaagtcg taagggaata
     7021 acttaggaaa ttgaatgata ttatcagcta ctatgttctt actgttttct actgtattct
     7081 gctcttctaa ctgcttttct gctgtatcta gtaccactag ttgtctcttg tgttctagtt
     7141 ggcttgtcgt gtgtgtgacc ttctgtaatg tggatgggat gacttcgact tggggattag
     7201 taggttgaga acttttatca ataggtggaa aaaggtcgtc aatagaaata tcaaatgcgt
     7261 ttgctaattt gaataatgta tcttttttag gtgaccgaaa acctttttcg taatttccga
     7321 tagcattttt actcattcct atttcttcac caagttcctg ctgagtccat cctttttgtt
     7381 tgcgatatat tcgaattttt tcaccgatat agatagctaa ttgttctgta ttcattttaa
     7441 tcacctcggt taatttctaa gactatgata acacaaaaac acacgaaaag aaaacttttt
     7501 tatgttttta gacaaaaaag tgttgacaga ccacgaaacg tgtgctaaaa tataatcaag
     7561 gtcaaggaaa tgaccgaata aaacgaaagg agcaaggcaa atggtggaca tactaaaaag
     7621 cctaaaacca gaagaactcg gcacagttct aatagtccta ggcttggtaa gagaagctcg
     7681 cttatggcac aaacaagtgc ttgagcacaa gcggaactta caaaacaaaa agtaagagca
     7741 aggggagaaa cctccccaac ctcttatctt tagtgtacca ccatttgcta aggaaagcaa
     7801 tatgaaatgg ttgtttggtt tattggtagt gtcatttgtt gtacggcaga ttgttaagtg
     7861 gaggaagaag tgatgaacga actagaaaaa acagccctca atgaaatact gaggactgtg
     7921 acgtatattg ctgaaagggt ggatagactt ggagaacagt tatatccaca tcttacagaa
     7981 acagataaaa aagaggtgct ggcattgatt aacgatgcac tttcgaaagg aaggggtatc
     8041 tcagataata atcttgacgg tgtcaagttc cagtcgaata ctcctcaagg gatagaaggt
     8101 gttagataaa caaagcttct aatttcttta gttctaggtg ataatcagga gaaataagac
     8161 tataggcttt gtagaaaaag gtatttaaac tagtttctgt atataacgca gatagtttac
     8221 gacactctgc taaaaagtct ggtctgcctt ggaaaatggg aagcataatc gcagctatgt
     8281 aagtgtttat cttacgattt cctgtgggat tatcttttaa gtagtccaaa ggtaattgtt
     8341 ttagatttac aggttcgctt tcttgtaatt gtgaattact gtaatcaagc gtaaagtcag
     8401 caaaacctcg aaccaaggca ttgacagaat tagaccactc tttaacaaaa ccttgtagga
     8461 aaaggtgaga agctacctca cataagactt cttcaaacca aaacatcggc gtattagaag
     8521 gcgatttgta ataagcgtgt aatagctcgt gacctaactg gtaaataact tgagaatgct
     8581 cattgatttc ttgtaagtgt aaga
//
LOCUS       DASFQS010000089         8394 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.091, whole genome shotgun sequence.
ACCESSION   DASFQS010000089 DASFQS010000000
VERSION     DASFQS010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8394
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.091"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(28..480)
                     /locus_tag="U1041_001794"
     CDS             complement(28..480)
                     /locus_tag="U1041_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM4768886.1"
                     /translation="MTQSYKTILVAVDGSKGAELALHKAIHVALRNQARLIIAHVIDT
                     RALHNVVAFDASVYESLEREAELLLEEYKQEALNAGLTDVQIRIEFGNPKTLLAIDIP
                     KETGADLMLLGATGLNAFERLLIGSSSEYIMRHATIDLLIVRDGEKSL"
     gene            635..1849
                     /locus_tag="U1041_001795"
     CDS             635..1849
                     /locus_tag="U1041_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4768887.1"
                     /translation="MKQFNKSTKLDDVAYDIRGPVLEEAMRMRANGEQILRLNTGNPA
                     EFGFTAPDEVIRDLIHNARKSEGYSNSKGIFSARKAIMQYCQLKKFPNVDIEDIYLGN
                     GVSELIVMSMQGLLDNGDEVLVPMPDYPLWTAAVSLAGGKAVHYVCDEAAEWYPDLAD
                     MESKVTSRTKAIVLINPNNPTGALYPKEILEGIVDIARRHELIIFSDEIYDRMVFDGA
                     VHIPIATLAPDLFVVTMNGLSKSHRICGFRVGWMVLSGPKKHVKGYIEGLNMLSNMRL
                     CSNVLAQQVVQTSLGGYQSVDELLMPGGRLYEQREFITKAINDIPGLSAVKPKAGLYV
                     FPKIDREMYRVEDDEQFVLDFLKQEKVLLVHGRGFNWKDPDHFRIVYLPRVDELAEIQ
                     EKMSRFLRQYRR"
     gene            2001..2789
                     /gene="codY"
                     /locus_tag="U1041_001796"
     CDS             2001..2789
                     /gene="codY"
                     /locus_tag="U1041_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HEM4768888.1"
                     /translation="MTTLLEKTRNITSILKRSEEQLAEELPYNAIAEHLSAIIDCNSC
                     IINSEGEVLGYHMNYETNNDRVEEFFQNKQFPEGYVKAVAQVYDTQVNLPVESELTAI
                     PVESRSTYPKGLTTIAPIHVTGIRFGSLIIWRNNEQFHDDDLILVEIAATVVGIQLLN
                     FQREEDEKNIRRRAAVNMAVNTLSYSEMKAVAAILGELDGNEGQLTASVIADRIGITR
                     SVIVNALRKLESAGIIESRSLGMKGTYLKVLIPAIFDEIKKRDY"
     gene            2791..3342
                     /locus_tag="U1041_001797"
     CDS             2791..3342
                     /locus_tag="U1041_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002268947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEM4768889.1"
                     /translation="MTKALISIDYTIDFVADEGKLTAGKSAQAISERIAQVTQEAFEN
                     GDYIFFAIDGHEEGDEFHPEAQLFPSHNIIGTQGRDLYGPLADFYQKHKGHARVRWMD
                     KRHYSAFSGTDLDVRLRERGVDTVVLTGVLSDICVLHTAIDAYNKGYRIEVVSSAIAT
                     LTEENHQFALNHLRHVLGATIID"
     gene            3606..3953
                     /gene="rplS"
                     /locus_tag="U1041_001798"
     CDS             3606..3953
                     /gene="rplS"
                     /locus_tag="U1041_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEM4768890.1"
                     /translation="MNPLIQSLTEGQLRTDIPSFRPGDSVRVHAKVVEGTRERIQIFE
                     GVVISRKGQGISEMYTVRKISGGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRA
                     LQGKAARIKEIRR"
     gene            4142..4816
                     /locus_tag="U1041_001799"
     CDS             4142..4816
                     /locus_tag="U1041_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HEM4768891.1"
                     /translation="MSEQFIPSVLSDLRQDIVQMPEVIKECSGIRIYGRRIRSVLFTT
                     DVSIIANHNADAILAVYPFTPSPAIIKSIMLVASVPVLAGVGGGLTTGMRSANMSLLS
                     ESEGAYAVVVNGPTDVKTIEAINKVVDIPIIYTVVSEKSDLTSRIKAGVDILNVSCGI
                     ETPRVVKKIREAFPDFPIIATGGPTEDSIRRVIEAGANAVSYTAPSNGELFKGKMEKY
                     RKHAKD"
     gene            5034..5336
                     /gene="gatC"
                     /locus_tag="U1041_001800"
     CDS             5034..5336
                     /gene="gatC"
                     /locus_tag="U1041_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017644687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEM4768892.1"
                     /translation="MKISEAEVRHVAKLSKLEFSDQETAEFAISLSKIVDMVELLNEV
                     DTTGVAVTTTMADRKNVLRADIAQKGESREELFKNVPESQDNFIKVPAILDGGGDA"
     gene            5336..6802
                     /gene="gatA"
                     /locus_tag="U1041_001801"
     CDS             5336..6802
                     /gene="gatA"
                     /locus_tag="U1041_001801"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEM4768893.1"
                     /translation="MTFNNKTIDELHDLLVKKEISATELTKATLEDIKSREGAVDAFL
                     TITEDAALAQAAALDEKGIDADNVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIFD
                     ATSVSQAYAKDMIVVGKTNMDEFAMGGSNENSAFKPTKNAWDQTKVPGGSSGGSAAAV
                     AAGQVRLSLGSDTGGSIRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTV
                     KENAQLLNVISGHDVKDATSTINEIADFTSKIGQDIKGLKIALPKEYMGEGIDPQVKE
                     TILKAAKHLESLGVIIEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDA
                     TNLDEIYVKTRSQGFGEEVKRRIMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFA
                     DYDLILGPTAPTVAFGLDTLNHDPVAMYLADLLTIPVNLAGLPGLSIPAGFVEGLPVG
                     LQLIGPKYSEETIYQVAAAFEATTDYHKQQPVIFGGAN"
     gene            6802..8241
                     /gene="gatB"
                     /locus_tag="U1041_001802"
     CDS             6802..8241
                     /gene="gatB"
                     /locus_tag="U1041_001802"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017770317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEM4768894.1"
                     /translation="MNFETIIGLEVHVELNTNSKIFSPSSAHFGEVPNANTNVIDWSF
                     PGVLPVLNKGVVDAGIKAALALNMDIHKEMHFDRKNYFYPDNPKAYQISQFDEPIGYN
                     GWIEIELEDGSTKKIRIERAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMR
                     SPEEAYAYLTALKEIIQYTGISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNS
                     FNYVRKGLQHEVERQAKILRSGGQIQQETRRYDESTGETILMRVKEGSADYRYFPEPD
                     LPLYEIDDSWIEEVRAELPVFPKARRAHYVENLGLTAYDAGQLTSTKALSDFFEAAVA
                     AGGDAKQVSNWLQGEVAQFLNAEGKTIEQIALTPENLVEMIALIADGTISSKIAKKVF
                     VHLAKEGGSAKAYVEKAGLVQISDPAVLIPIIHQVFADNEAAVADFKSGKRNADKAFT
                     GFLMKATKGQANPQVAQQLLAQELAKLLD"
BASE COUNT         2350 a         1504 c         2031 g         2509 t
ORIGIN      
        1 cttgattcgt aaatcaagtc ttttggttta taaacttttt tctccatcgc gaacaatgag
       61 taaatcgata gttgcgtggc gcatgatata ttcggatgag gatccgatca ggagacgttc
      121 aaaggcattt agaccagttg ccccaagtaa cataagatca gcaccggttt cctttggaat
      181 atcgatagcc aatagggttt tagggttacc gaattcaatg cgaatctgta catcggtcag
      241 accagcgttg agggcttctt gtttgtattc ttcgaggagg agctccgcct ctctttctaa
      301 agattcatag acagaggcgt caaatgcaac aacattgtgg agagcacggg tgtcaatcac
      361 atgggcgata atcagacgtg cttggttgcg tagtgcgaca tgaatagctt tatgaagagc
      421 taattctgct cctttagagc cgtctacagc gacgagtatt gttttgtaag attgtgtcat
      481 aataataact cctttcagaa gagctttgtc ccgaaatagg tagagtagtt ccttacattt
      541 ttattataag ccttttgaga gaaaatgtaa aggattcttg tactttttta gcttttacag
      601 tacaatagaa aagatagaaa gtcgaggtga cgacatgaag caatttaaca agtcaacaaa
      661 attggatgat gtagcatatg atattcgtgg gcctgttttg gaagaggcca tgcgcatgcg
      721 tgccaatgga gagcagattt tacgtttgaa tacggggaat cctgcagaat ttggttttac
      781 tgctccagat gaagttattc gtgacttgat tcataacgcc cgtaaatcag agggatattc
      841 gaacagtaag ggaatttttt ctgcacgtaa ggctatcatg cagtattgtc agctaaagaa
      901 atttccaaat gttgacattg aagatattta tcttggaaac ggcgtgagtg agctgattgt
      961 tatgtctatg caaggtttgc tagataatgg tgatgaggtg ttggtgccaa tgccagacta
     1021 tcctctctgg actgccgcag ttagtttggc tggtggtaaa gctgttcact atgtttgtga
     1081 tgaagcagct gaatggtatc cagatttggc agatatggag tccaaggtga cttctcgaac
     1141 caaggcaatt gtccttatca atccaaataa tccaactggt gctctctatc cgaaagaaat
     1201 tttagaagga atcgttgata ttgctcgtag acatgaattg attattttct ctgatgagat
     1261 ttatgatcgt atggtctttg acggagctgt tcatatccct attgcgacac tggctccaga
     1321 tttatttgtt gtgacgatga atggactgtc taaatcgcat cgtatttgtg gtttccgagt
     1381 aggttggatg gtcttatctg gtccgaaaaa gcatgtaaaa gggtacattg aaggcttgaa
     1441 tatgttgtcc aatatgcgtt tgtgttcaaa cgttttggct caacaggttg ttcaaacttc
     1501 tttgggaggt taccaatcgg ttgatgaact cttgatgcct ggcggacgct tatatgaaca
     1561 aagggaattc attaccaagg cgattaatga tattccggga ctttctgctg taaaacctaa
     1621 ggctggtctg tatgtcttcc caaaaattga tcgtgagatg taccgagttg aggatgatga
     1681 acaatttgta ttggatttcc tcaagcaaga aaaagtactt ttggtccatg gtcgaggttt
     1741 taactggaag gatccagatc atttccgtat tgtgtattta ccacgtgtgg atgagttggc
     1801 agaaattcaa gaaaaaatgt cacgattttt gcggcaatat cgtagataat ggaattttgg
     1861 gctgaatgtt aatcagcctt ttctttttac ttgaatgaaa ttgtttgaat ttttctgata
     1921 acggcaaata ttctgataat tgttgaaatt ttatgtattt tttgctatac tgaaagcaat
     1981 tacagagtaa agaggaaaat atgacaacat tattagagaa gacacggaat attacttcta
     2041 ttttgaagcg ttccgaagag caattggcag aagaattgcc ttacaatgcc attgctgagc
     2101 atttatcagc tattattgac tgcaactcgt gcatcattaa tagtgaaggt gaagttttgg
     2161 gataccacat gaactatgag acgaacaatg atcgtgtgga agaatttttc caaaacaaac
     2221 aattcccaga aggatatgta aaagcagttg cgcaggttta cgatacgcag gttaatttgc
     2281 ctgtcgagag cgagttgact gccatccctg tcgaatcacg atcgacctat ccaaaaggtc
     2341 tgacaacgat agcgcctatc catgtgacgg ggattcgttt tggttcgctt attatttggc
     2401 ggaataatga gcagtttcac gatgatgatt tgattttggt tgagattgcg gcaacagtag
     2461 ttggtattca gttacttaat ttccaacggg aagaagacga gaagaatatc cgtcgtcgtg
     2521 cggcagttaa tatggcagta aatacgctat cttactcaga aatgaaggca gttgcagcta
     2581 ttttgggtga attggatggc aatgaggggc aattgactgc ttctgtgatt gcagatcgta
     2641 tcggtattac acgctcggtg attgtgaatg cactgcgtaa gttggagagt gcagggatta
     2701 ttgaaagtcg ttctttggga atgaagggga cttatttgaa agttctcatc ccagctattt
     2761 ttgatgaaat taagaaacgt gactactaaa atgacaaaag cattgatttc gattgattat
     2821 acaatagatt ttgtggcaga tgaaggaaag ttgactgctg gaaaatcagc tcaggctatt
     2881 tctgaacgaa ttgctcaggt tacgcaagaa gcttttgaaa atggagacta cattttcttt
     2941 gcgattgatg gtcatgagga gggggatgaa tttcatcctg aagctcagct tttcccaagt
     3001 cataatatca ttgggacgca agggcgagac ttgtatggtc ctttagcaga tttttatcaa
     3061 aaacataaag ggcatgcgcg tgttcgttgg atggataaac gtcattattc tgctttttct
     3121 gggacggatt tggatgttcg actaagagag cgtggtgtag atacggttgt cttgacgggt
     3181 gttttgtctg atatttgtgt tcttcataca gctattgatg cttataataa ggggtatcgt
     3241 attgaggtgg tctcatcagc cattgctaca ttgacggagg agaatcatca gtttgctctt
     3301 aaccatttgc gtcatgtact cggtgcgaca atcattgatt aatagtatag tgaccagtct
     3361 gtggactggt ttttcgtttt tctccaacag gaatgtatca ttaacactct tcgaaaatca
     3421 aactcagacc ttgttgactt aacttgtaaa agaagcggtg tgattgacca tgataaattt
     3481 atcaaaatgc tttacatagg tgattacttg gtgtataata tagtctgtgt gtaatggacg
     3541 cacaaaaata cagtttatcc gctgggttta aaagcaccta agattgacaa agataggaga
     3601 ataaaatgaa tccattgatc caaagtttga cagaaggtca acttcgtact gatatccctt
     3661 ctttccgtcc tggtgactct gttcgtgttc acgctaaggt tgtcgaagga actcgtgagc
     3721 gtattcagat cttcgagggt gttgttatct ctcgtaaagg tcaaggtatc tcagaaatgt
     3781 acactgtccg taaaatctct ggcggtgtag gtgttgagcg tacattccca atccacactc
     3841 cacgtgttga taagattgaa gtcgtacgtt acggtaaagt acgtcgtgct aaattgtact
     3901 acctacgtgc attgcaaggt aaagcagcac gtatcaaaga aatccgtcgt taagatagtc
     3961 ctacagacta ttttggtcgg agaatgggag gcagcgaaag ctgtctcttt tttttaaaaa
     4021 aaatctgttg aaaaagtacc aaattgtgaa agcagtggta aaatggattg tttttgtgta
     4081 tcttccatga aataatatgt tatactatat attattgaag ctagtataga ggaggttgag
     4141 gatgagcgaa cagtttattc catctgtttt atcagattta cggcaggata ttgttcagat
     4201 gccagaggtt atcaaggaat gtagtgggat tcgtatttat ggtcgtcgca ttcgttcagt
     4261 cttatttaca acggatgtgt ctattattgc caatcacaat gcagatgcca ttttggctgt
     4321 ttatccattt acgcccagtc cagctattat caaaagtatt atgttggttg catcagttcc
     4381 agtcttggct ggtgttggtg gaggcttgac gacaggtatg cgttcagcta atatgagtct
     4441 attgtctgag tcggagggag catacgctgt tgtggtaaat ggaccaacgg atgtaaaaac
     4501 aattgaggca atcaataagg tagtagatat tcctatcatt tataccgttg tttctgaaaa
     4561 gtctgattta acctcacgga ttaaagctgg agtagatatt ctaaatgttt cttgcggtat
     4621 agaaacgcca agggttgtga agaagattcg agaagctttc cctgactttc caattattgc
     4681 gactggtggt ccgactgagg actctattcg tcgggttatc gaagctggag ccaatgctgt
     4741 ctcctataca gcaccaagta atggggagct ttttaaaggt aaaatggaaa aataccgcaa
     4801 acatgcaaag gattagctca taaaaaagat aggctaagca aacagtaagt tttattgcta
     4861 gatgaaactt gctgtttttt atcgttttac ggtgtgagat taggaatact tcgcaattta
     4921 aagaatggat ttttaggagg aaataggtaa catattaggt tatttctacc tttgtgtgag
     4981 gctggaaata tggtataatg agaagataga tttccattag gaggaaagta agaatgaaga
     5041 tttctgaagc tgaagtccgt cacgttgcca agctgtctaa gctggaattt tcggaccagg
     5101 aaacagcgga atttgcgata agtttgagca agattgtcga tatggttgaa ttgctcaatg
     5161 aagtagatac gacaggtgtt gcggtaacga ccactatggc tgaccgtaag aatgtcttgc
     5221 gagcagatat tgcccaaaaa ggggagagcc gtgaggagct ctttaaaaat gtgcctgaat
     5281 cacaagataa ctttatcaag gtaccagcta ttctagacgg gggaggagat gcctaatgac
     5341 ttttaacaat aaaaccattg atgaattgca tgacctcctt gtcaagaagg agatttcggc
     5401 tacggagtta accaaggcaa ctttggaaga cattaagagc cgtgaaggag cagtggatgc
     5461 tttcttgact attacagaag atgcagcttt ggcgcaggct gctgcccttg atgaaaaagg
     5521 gattgatgcg gacaatgtta tggcagggat tcctttggca gtcaaggaca atatctctac
     5581 taaggggatt ttgaccacag cagcttcaaa aatgctctat aactatgagc cgattttcga
     5641 tgcgacatca gtttcccaag cctatgcaaa ggatatgatt gttgttggta agaccaacat
     5701 ggacgagttt gccatgggag gttctaatga gaactctgcc ttcaaaccga ctaaaaatgc
     5761 ttgggatcag accaaggttc ctggtggatc ttcaggtggt tcggcagctg cagttgctgc
     5821 tggtcaggtc cgtttgtcac tcggttctga cacaggcggt tccatccgcc agcctgcagc
     5881 ctttaatggt atcgtcggta tgaaaccgac ctacggaacg gtgtcacgtt ttggcttgat
     5941 tgcctttggt tcatctcttg accagattgg tccattttca cagacggtta aggaaaatgc
     6001 ccagttgctc aatgttatct ctggtcatga tgttaaggat gcaacatcaa ccatcaatga
     6061 aattgcggac tttactagca agattggtca ggacatcaag ggcttgaaaa tcgctcttcc
     6121 aaaagaatac atgggcgaag ggattgatcc acaggtcaag gaaaccattc tcaaggcggc
     6181 taagcacttg gaaagcttgg gagtaatcat tgaagaagtt agcctgccac attctaagta
     6241 tggggttgct gtttactaca ttatcgcatc atcagaggcg tcttctaact tgcagcgttt
     6301 tgacggtatc cgctatggtt tccgtgcaga agatgcgaca aacttggatg agatttacgt
     6361 gaaaacccgt agccaaggtt ttggtgagga agtcaaacgt cgtattatgt taggtacgtt
     6421 tagcctatca tcaggttact acgatgccta cttcaagaag gctggtcagg tgcggacctt
     6481 gattatccaa gattttgaaa aggtctttgc ggactatgac ttgattttgg ggccaactgc
     6541 tccgaccgtt gcctttggtt tggatacgct caaccatgac cctgtggcta tgtacttggc
     6601 ggacttgtta acaattcctg taaacttggc aggtctgcct ggtctttcta ttcctgctgg
     6661 ttttgtagaa ggcttgccag ttggcttgca gttgattggt ccaaaatact cagaagagac
     6721 catttaccaa gtggctgctg cctttgaagc gacgacagac taccacaagc aacaaccagt
     6781 gatttttgga ggtgctaact aatgaacttt gaaacgatta ttggtctaga agtccatgtg
     6841 gagttgaata ccaactcgaa aattttctca ccttcatctg ctcattttgg tgaggtccca
     6901 aatgccaata ccaacgtgat tgactggtcc ttcccaggtg tccttcctgt ccttaataag
     6961 ggcgttgtgg atgctgggat taaggctgcc ttggctttga acatggacat tcacaaggaa
     7021 atgcattttg accgcaagaa ctatttctat cctgataacc ctaaagccta tcagatttct
     7081 cagtttgatg agccgattgg ctacaatggt tggattgaga ttgagctaga agatggttca
     7141 actaagaaaa tccgtatcga gcgtgcccac ttggaagagg atgctggtaa gaatacccac
     7201 gggacagacg gctattctta tgtagacctc aaccgtcagg gcgtgccatt gattgagatt
     7261 gtatcagaag ccgatatgcg ctcgcctgaa gaggcctatg cctacttgac agcccttaaa
     7321 gaaattattc agtacactgg tatttcagat gtgaagatgg aagagggttc gatgcgcgtg
     7381 gatgccaaca tctctcttcg tccctatggt caagaaaaat ttggtaccaa gactgagttg
     7441 aaaaacctca actccttcaa ctatgttcgc aagggcttgc agcacgaggt agaacgtcag
     7501 gccaaaatct tgcgttcagg tggtcaaatc cagcaggaaa ctcgccgtta cgatgaatct
     7561 actggggaaa ctattctcat gcgtgtcaag gaaggttcag cagattaccg ttacttccca
     7621 gagccagacc taccgctcta tgagattgat gatagttgga ttgaggaagt gcgtgcagaa
     7681 ttgccagtct ttccaaaggc tcgccgtgct cactatgtgg aaaacttggg cttgaccgcc
     7741 tacgatgctg gtcaattgac gtctaccaag gctttgtctg acttctttga agcagcagtg
     7801 gcagcaggtg gcgatgccaa acaagtttct aactggttgc agggtgaggt ggctcagttc
     7861 ctcaatgctg aaggtaagac tattgagcaa atcgccttaa cacctgaaaa cttagttgag
     7921 atgattgcct tgattgcgga tggtactatt tcatctaaaa tcgccaagaa agtctttgtt
     7981 cacttggcga aagaaggtgg ctctgctaag gcttacgttg agaaggctgg tttggtacag
     8041 atttcagatc cagctgtcct cattccgatt atccaccaag tctttgcgga taacgaagca
     8101 gccgtagctg acttcaagtc tggcaaacgc aatgcagaca aggcctttac aggtttcttg
     8161 atgaaagcga ctaagggaca agctaaccca caagttgcac aacaactttt ggcacaggaa
     8221 ttggctaagt tgttggatta aaatgaatag aagaaaaccg ctaggattga atcttagcgg
     8281 tttttgctgt tacttgtaaa ctaggtactt ctatcttatt tttatgctat attttaaaaa
     8341 cggtataaag tattagaagg tagcgcgggt attgactgtt aaaggatagt tagc
//
LOCUS       DASFQS010000090         8035 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.093, whole genome shotgun sequence.
ACCESSION   DASFQS010000090 DASFQS010000000
VERSION     DASFQS010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8035
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.093"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(24..1217)
                     /gene="icd"
                     /locus_tag="U1041_001803"
     CDS             complement(24..1217)
                     /gene="icd"
                     /locus_tag="U1041_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEM4768895.1"
                     /translation="MAEKILMREGRLIVPDCPVIPYIEGDGIGRDIWSVSQKVIDAAV
                     KKAYAGQRFIQWREVLAGEKAYELTGTSLPNETLAIIREHLVAIKGPLGTPIGKGHRS
                     LNVALRQELDLYACVRPIRYFKGVPSPLKEPEKTDITIFRENTEDIYAGIEWEAGSDE
                     VAKVISFLQEEMGVVNIRFPESSSIGIKPISEEGSKRLIRSAIEYALEHQLKIVTIVH
                     KGNIQKFTEGGFRKWGYELAKEEFATELAEGTLVVNDIIADNFLQQILLAPENFQVVA
                     LTNLNGDYASDALAAQVGGIGISPGANINYQTGHAIFEATHGTAPDIAGKDLANPCSL
                     LLSACMMLEYIGWKEAATLIIQALEDAFINKNVTLDFAKILDVAHQSTSRFSEVLIDS
                     IMKKK"
     gene            complement(1220..2338)
                     /locus_tag="U1041_001804"
     CDS             complement(1220..2338)
                     /locus_tag="U1041_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019790817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEM4768896.1"
                     /translation="MTETNGLKDAIACDTRISAIENDRLSYAGYDIAELMENNASFEE
                     VIYLLWNLHLPTQVELNYFEKRLRKEYAISDAVEQCILIQSRRHLHPMSVLRSTVSLL
                     GVYNVHAEENSLEALYEQSIQIMAKVPTIIATFARLRRGLVPIEPRSDLGFAANFLYM
                     LNGEEPSDLQIKAFNKALVLHADHELNASTFAARVTASTLTDLYSCVTTAIGTLKGSL
                     HGGANERVFDMLLAIRESGDTERYLQKKLDSKEKIMGFGHRVYKTVDPRQEYLKEMAR
                     DLTFGTDDEAFYRLSEEVESFIKNKKGLIPNVDFYSATVYHVLGIDSDIFTLIFAMSR
                     MAGWIAHVQEQRKNNKLIRPRSSYLGGRNLVYIPIGKR"
     gene            complement(2335..5004)
                     /gene="acnA"
                     /locus_tag="U1041_001805"
     CDS             complement(2335..5004)
                     /gene="acnA"
                     /locus_tag="U1041_001805"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEM4768897.1"
                     /translation="MEKSHRKCLFHKGGEYSYYALDSISMEEKVDIHSLPYTIRILLE
                     SLLRKKDGLDVTKNHIMELLHYQAASPKGEIPFKPSRVILQDFTGVPVVVDLASMRDA
                     VVKAGGNPELINPEIPVDLVIDHSVQVDFFGTEDALEKNIALEFERNNERYEFLKWAE
                     NSFENYRAVPPATGIIHQVNIEFLSDVIINNDGLLYPDSMFGTDSHTTMINGIGVLGW
                     GVGGIEAEAAMLGEASYFPVPEVIGVRLAGQLPKVATATDLALKVTQLLRQENVVGKF
                     VEFFGPGLSSLTLADRATVSNMAPEYGATCGYFPIDRETLHYMRLTNRSEEHVELTEA
                     YAKANYLFYDAERFPSYSKVLELDLSTVVPSISGPKRPQDLIELTDAKAEFQASLIRE
                     VGVRGFGLEEAELDKIATVKYVEGDEQIQTGHVAIAAITSCTNTSNPYVLLAAGLLAK
                     NAVEKGLAVSKTVKTSLAPGSKVVTGYLKKSGLQTYLDALGFNLVGYGCTTCIGNSGD
                     LRPEVAEAIKEEDLLVSAVLSGNRNFEGRINPLVKANFLASPPLVVAYAIAGNMNVDL
                     TRDPLGYDEKQQAVYLADIMPSREEVDDYIERYVTRDLYKEEYQQVFTDSQAWNAIET
                     KTEKNYNWNSSSTYIQNPPYFDNMQADLSIKPLENLSVLAKFGDTVTTDHISPAGNIA
                     RLSPAARYLEENGIVYKDFNSYGSRRGNHEVMMRGTFANIRIKNELAAGKIGGWTRVG
                     DEILPIYDAAMRYKEAGVGSIVIAGKDYGMGSSRDWAAKGSSLLGVKAVLAESFERIH
                     RSNLVMMGVLPLQFLEGQSAESLGLTGRESYTIDLPEDVGVGQIVTVHAQTDDVTKQF
                     QALVRFDAEADIRYYRHGGILPMVVRKKLGGKV"
     gene            5477..5695
                     /gene="nrdH"
                     /locus_tag="U1041_001806"
     CDS             5477..5695
                     /gene="nrdH"
                     /locus_tag="U1041_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HEM4768898.1"
                     /translation="MVTIYSKNDCVQCKMTKKFLDQHSVDYKEINLDEQPEFIDHVKG
                     LGFSAAPVIETENDVFSGFQPGKLKALV"
     gene            5728..7887
                     /gene="nrdE"
                     /locus_tag="U1041_001807"
     CDS             5728..7887
                     /gene="nrdE"
                     /locus_tag="U1041_001807"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000053857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HEM4768899.1"
                     /translation="MSLKELGDVSYFRLNNEINRPVNGQIPLHKDQEAVKAFFKENVL
                     PNTKQFDSILDKIAYLLEENYLEKEFLDQYSPEFIIKIDQFLKDQNFRFKSFMAAYKF
                     YNQYALKTNDGAYYLESMEDRVLFNALYFAEGDEELALNLANEMIHLRYQPATPSFLN
                     AGRARRGELVSCFLIQVTDDMNSIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGY
                     EGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLDVFHPDIISFLSTKKENADEKVR
                     VKTLSLGITVPDKFYELARKNEDMYLFSPYSVELEYGVPYSYLDITEKYDELVANPRI
                     RKTKIKARDLETEISKLQQESGYPYVINIDTANRSNPVDGKIIMSNLCSEILQVQTPS
                     VINDSQEYLTMGTDVSCNLGSTNIVNLMKSPDFGRSVRTMTRALTYVTDHSHISAVPS
                     IEAGNEQAHSIGLGAMGLHSYLAQNLIDYGSKTAVEFTNIYFMLLNYWTLVESNNIAR
                     ERKATFHNFDKSKYADGTYFDKYVTGNYQPQSDRVKELFEGIFIPSGQDWADLREKVM
                     ADGLYHQNRLAVAPNGSISYINDVSASIHPITQRIEERQEKKIGKIYYPAAGLATETI
                     PFYKSAYDMDMRKVIDVYAAATEHVDQGLSLTLFLRSELPKELYEWKTENKQTTRDLS
                     ILRNYAFNKGIKSIYYIRTFTDDGEEVGANQCESCVI"
BASE COUNT         2442 a         1909 c         1373 g         2311 t
ORIGIN      
        1 cgtcataaaa agagaggttc agtttacttt ttcttcatta tagaatctat tagaacttct
       61 gaaaatcgac tagtagattg atgagcaacg tccaaaattt tagcaaaatc aagcgtaaca
      121 tttttattta taaaagcatc ttccaaggcc tgaataatta atgtagctgc ttctttccag
      181 cctatatatt ccaacatcat acaagccgaa agcaagaggg aacatggatt agccaaatcc
      241 tttcctgcaa tatcgggagc agttccatgc gttgcttcaa agatagcatg acctgtctgg
      301 tagttaatgt tagcacccgg tgagatgcct attcctccga cctgagccgc aagagcatct
      361 gatgcataat ctccatttag atttgtaaga gcaaccacct ggaagttttc cggcgccaat
      421 aaaatctgct gcagaaagtt atccgcaata atgtcattta ctaccaaagt cccctctgca
      481 agttctgtag caaattcttc tttcgccaat tcataacccc acttgcggaa accgccttct
      541 gtaaactttt gaatatttcc cttatgaact atggtcacta tcttcaattg atgttctagg
      601 gcatattcta ttgcagagcg aatgaggcgt ttactccctt cttccgaaat cggtttgata
      661 ccaatacttg aagattctgg aaaacggata tttaccactc ccatttcttc ttgcagaaag
      721 gaaatgactt tggcaacttc atctgaacca gcctcccatt caatacctgc ataaatatct
      781 tctgtatttt cacgaaaaat agtaatatcc gtcttttcag gctctttcag cggacttggc
      841 actcccttaa aatagcgaat cggacgcaca caggcataca aatctaattc ttgacgaagt
      901 gcaacattaa gagaacgatg acctttccca atcggcgtcc ccaagggacc tttgattgca
      961 actaaatgct cacggattat tgctaatgtc tcattcggca aagaagttcc tgttaattca
     1021 taagcctttt ctcctgccaa aacctccctc cactgaataa aacgttggcc tgcataggct
     1081 tttttcactg cagcatcaat aactttttga ctgactgacc aaatatccct gccaatacca
     1141 tctccttcaa tatagggaat aacgggacaa tctggaacaa ttaaccgtcc ctctctcatt
     1201 aggatttttt ctgccatatt tacctctttc caatcgggat gtataccaaa ttcctaccac
     1261 ctaagtagga agagcgcgga cgaatcaatt tattattttt ccgttgttcc tgaacatgtg
     1321 caatccaccc cgccatacgg ctcattgcaa aaatcaatgt aaaaatatca ctatcaatac
     1381 ctagcacatg gtaaactgtc gccgaataga agtctacgtt tggaattaaa ccttttttgt
     1441 ttttaataaa gctctctact tcctctgaca atctataaaa cgcttcatcg tctgttccga
     1501 atgtcaaatc acgcgccatc tccttcaaat actcttgacg aggatcaacc gttttataga
     1561 ctcgatgacc aaatcccata attttttcct tcgaatccag cttcttctgc aaatatctct
     1621 cggtatcacc actctcacga atagccagca acatgtcaaa cactcgttca tttgcaccac
     1681 catgcaatga gcctttcaga gtcccaattg ccgtggtgac acaagaatat aaatccgtta
     1741 acgttgatgc cgtgacacgc gcagcaaaag tagacgcatt caattcatga tcagcatgaa
     1801 gcaccaaagc tttattaaac gctttgattt gtaaatcact cggctcctca ccattcagca
     1861 tataaagaaa attcgccgca aaccccagat cagaccgcgg ttcaattgga accaatccac
     1921 gtctcaaacg agcaaatgtt gcaataatcg tcggaacctt ggccataatc tgaatagatt
     1981 gttcatacaa tgcttctaac gaattctctt cagcgtgtac attatatact ccaaggagag
     2041 atacagtcga acgcaacacg ctcataggat gcaaatgtcg ccgtgattga atcagaatac
     2101 attgctctac cgcatctgaa atcgcatatt cttttcgcag gcgtttctca aaataattta
     2161 attcaacctg agttggtaaa tgcaggttcc acagaagata gatgacttcc tcaaaagaag
     2221 cgttattttc catcaattca gcaatgtcat accctgcata ggacaagcgg tcattttcaa
     2281 ttgcactgat tcgcgtatca caggcaatcg catcttttaa cccattcgtt tctgtcatac
     2341 ctttcctcct aatttctttc ttactaccat aggtaaaata cctccgtggc gataataacg
     2401 aatatccgcc tctgcatcaa accgcaccag agcttgaaac tgctttgtaa catcgtctgt
     2461 ttgcgcatgg actgttacaa tttgaccaac accgacatct tctggcaagt cgattgtata
     2521 gctttcacgt ccagtcaagc caagactttc tgccgactga ccttctaaaa attgtaaagg
     2581 aagaacaccc atcatcacta aatttgaacg gtgaatccgc tcaaatgact cagcaagaac
     2641 ggccttcaca ccaagtaaac ttgaaccttt ggctgcccaa tcacggcttg accccatccc
     2701 atagtcttta ccagcaataa caatactacc gacaccagct tccttatatc tcatggctgc
     2761 atcgtagatt ggaagaatct catcgccaac tcttgtccaa ccaccaattt ttccagctgc
     2821 cagctcattc tttatacgaa tatttgcaaa agtcccacgc atcatgactt cgtgatttcc
     2881 acgacgactt ccataagaat taaaatcctt ataaacaatg ccattctctt cgagataacg
     2941 agcggctgga ctcaatcgtg caatattccc tgccggggaa atatgatctg tcgttacggt
     3001 atcgccaaat ttagccaaaa cagataaatt ttccagtggt tttatggata aatctgcctg
     3061 catattgtca aaatagggcg gattttgaat ataggtagaa gatgaattcc aattgtaatt
     3121 cttctctgtc tttgtttcaa tcgcattcca agcctgacta tctgtaaata cctgttggta
     3181 ttcttcctta taaaggtcac gagtcacata acgctcaatg tagtcatcta cctcctcacg
     3241 acttggcata atgtccgcaa ggtagacagc ttgttgcttc tcatcatacc ccagcggatc
     3301 ccttgttaaa tctacattca tatttcctgc aatagcatag gcaacaacaa gcggagggct
     3361 cgctaagaaa ttagctttta ccaatggatt aatccgtcct tcaaagttac gatttccaga
     3421 taataccgca gaaaccaata aatcttcttc cttaattgcc tccgctactt caggacgcag
     3481 atcacctgag ttaccgatac aagttgtaca accatagcca accaaattga accctaaagc
     3541 atctagatag gtctgcaaac ctgatttttt caaatagcca gtcactactt ttgagcctgg
     3601 tgccaatgac gtcttgaccg tcttagaaac tgccaaacct ttttctaccg cattttttgc
     3661 cagtaatcct gccgccaaaa ggacatacgg attggaggta tttgtacacg aggtaatcgc
     3721 cgcaatagca acatgacctg tttgaatttg ctcatctcct tcaacatact taaccgtggc
     3781 tattttatct aactctgctt cctccaaacc aaatccacgc acacctactt cacgtattaa
     3841 actagcctga aactctgctt ttgcatctgt taattctatc aaatcctgtg gtcttttagg
     3901 accagaaata gatgggacta ctgtcgataa atccaattct aaaaccttgc tataagacgg
     3961 aaaacgttca gcatcataga ataaataatt agccttagca taggcttctg tcaactctac
     4021 gtgctcctcc gaacggttgg tcaatctcat ataatgcaaa gtttctctat caatcgggaa
     4081 ataaccacaa gtcgcaccgt attctggagc catattggaa acagttgctc gatccgctaa
     4141 tgtaagagaa gataaacctg gtccaaagaa ttcgacaaac ttcccaacga cattttcctg
     4201 acgtagaagt tgagtgacct taagcgccaa atccgttgca gtggcaacct taggcaattg
     4261 cccagctagg cgaacgccaa tcacttcagg aacgggaaaa taagatgctt cacccaacat
     4321 tgcagcttcc gcctcaatac cacctacacc ccaaccaagt acaccaatac cgttaatcat
     4381 ggtcgtatga ctgtctgtac caaacataga atctggataa agcaagccat cgttgttgat
     4441 aataacatcg cttagaaatt caatgtttac ctgatggata attcctgttg ctggaggcac
     4501 agcgcgataa ttttcaaagg aattctctgc ccatttcaga aattcataac gttcattatt
     4561 tctttcgaac tctaaggcaa tatttttctc cagagcatct tcagtcccaa aaaaatcaac
     4621 ttgaacggag tggtcgatga ctaaatccac tggaatttcc ggattaatca attcagggtt
     4681 tccacctgct ttcaccaccg catcacgcat ggaggctaaa tctaccacaa caggaacacc
     4741 tgtaaaatct tgcaaaataa cacgactagg tttaaaagga atttctcctt taggagatgc
     4801 agcctgataa tgaagcaact ccattatgtg attttttgta acatccaaac catctttttt
     4861 tcttaaaaga ctttctaata aaatacgaat agtataggga agtgaatgaa tatccacttt
     4921 ttcttccatt gaaatcgaat ccaatgcata atatgaatat tctccccctt tatgaaacaa
     4981 gcattttcta tgtgattttt ccatatttta taacctcttt cgacattatt gaatagtata
     5041 gcacatatcg taatatttat tcaatatata gattacttaa tgtgtgacat tttctgacat
     5101 gtaccgcata ttaaaaaaat aaattgtttg aaggttaata aaaataagaa attttactca
     5161 acttgcaact gtttcaacaa tctattgaat gatattcaaa caccaactcg ctacgaacta
     5221 acaagggaat tccaatcaaa aaaataacca atttgtaact ctagatcact tcaatatctc
     5281 taccaaatta acttttagcc acatgaaaaa ttctagtatt caattgttta tttcgtatac
     5341 atttttgtac tatatatggt gtttgttcat tttttaacac actatatttt gtgccaaagt
     5401 taatcttcta tcttgacttt gaccccaaaa tctagtatcc tagattggtg aatttaatca
     5461 ataaaggaga aacagaatgg ttactattta ttcgaaaaat gattgtgtac agtgtaaaat
     5521 gaccaagaaa ttcttggatc aacatagtgt agattataaa gaaatcaatc tagatgaaca
     5581 gcctgaattt atcgatcacg taaaagggct cggtttctca gctgcacctg ttatcgaaac
     5641 tgaaaatgat gttttctcag gttttcaacc aggaaaacta aaagccttgg tttaactccc
     5701 tactgtttat agaaagagat tgcgactatg agtttaaaag agctaggtga tgtgtcctac
     5761 ttccgtttga ataacgaaat caaccgccct gttaatgggc aaatcccact ccacaaggac
     5821 caagaagcgg ttaaggcctt ctttaaagaa aacgtcctcc caaataccaa gcaatttgat
     5881 agtattttag acaagattgc ctatttattg gaagaaaact atcttgaaaa agagtttttg
     5941 gaccagtata gcccagaatt tatcatcaaa atcgatcaat tcttgaaaga ccaaaacttc
     6001 cgtttcaagt ctttcatggc agcctacaag ttttacaacc agtatgccct caaaaccaac
     6061 gacggtgcct actacttgga aagcatggaa gaccgtgttc tcttcaacgc cttgtatttt
     6121 gctgagggcg acgaagaatt agcactaaac ctggccaacg aaatgattca tttgcgttac
     6181 cagccagcaa caccgtcttt cctcaacgca ggccgtgccc gtcgtggtga gttggtatcg
     6241 tgtttcctca tccaagtcac tgacgatatg aactctatcg gacgttctat caactctgct
     6301 ctgcaattgt cccgtatcgg tggtggcgtc ggcatctccc tcagcaactt gcgtgaggca
     6361 ggtgctccaa tcaagggcta tgagggggca gcttctgggg ttgttcctgt tatgaaactc
     6421 ttcgaagaca gcttctccta ttctaaccaa cttggacaac gtcaaggagc tggggttgtt
     6481 tacctggatg ttttccaccc agacattatt tccttccttt cgactaagaa agaaaatgcc
     6541 gatgagaaag ttcgtgtgaa gaccttatca ctcggtatta ccgttcctga taaattctac
     6601 gaattggcac gtaaaaatga agatatgtac ctcttcagcc catactcagt tgagttggaa
     6661 tacggtgtcc cttatagcta ccttgatatt actgagaaat acgacgagtt ggtagcaaac
     6721 ccacgtatcc gtaagacaaa aatcaaggca cgtgacctag aaacagaaat ttctaaactt
     6781 caacaggaat ctggctatcc ttatgttatc aacattgata cagccaaccg tagcaatcct
     6841 gttgacggca agattatcat gtctaacctc tgttcagaaa ttcttcaagt acaaactcca
     6901 agcgtcatca atgattctca ggaatacttg actatgggaa cagacgtgtc atgtaacctt
     6961 ggttcaacca acatcgtcaa cctcatgaag tcacctgact ttggacgttc tgttcgtaca
     7021 atgacacgcg ctttgactta tgtgacggac cactcgcaca tttctgcagt accgtctatc
     7081 gaagctggta acgagcaagc tcattctatc ggtcttggtg ccatgggact tcactcttat
     7141 ctagcccaaa acttgatcga ttacggatca aaaacagccg tagaatttac caacatctac
     7201 ttcatgctcc tcaactactg gaccttggta gaatcaaaca atattgctcg cgaacgcaag
     7261 gcaaccttcc ataattttga caaatcaaaa tacgcagacg gtacttattt cgataaatac
     7321 gtgactggta attaccaacc acaatctgac cgtgtcaaag aactctttga aggcattttc
     7381 attccaagcg gacaagattg ggctgacctc cgtgagaaag taatggcaga tggtctctat
     7441 catcaaaacc gtctagctgt tgcaccaaac ggttctatca gctatatcaa cgatgtttct
     7501 gcttctattc acccaattac ccagcggatt gaagaacgcc aagagaagaa aatcggtaaa
     7561 atctactatc cagcagctgg tttggcaact gaaaccattc cattctacaa gtctgcctat
     7621 gatatggata tgcgcaaggt catcgatgtc tacgcagctg caactgagca cgtggaccaa
     7681 ggtctgtccc tcactctctt cctccgcagt gagcttccaa aagaactcta cgaatggaaa
     7741 acagagaaca aacaaactac gcgtgacctc tctatccttc gtaactacgc cttcaacaaa
     7801 ggtatcaagt ctatctacta catccgtacc tttaccgatg acggcgaaga agtcggcgca
     7861 aaccaatgtg aaagttgtgt gatttaacgt agcaagttta gctgttgata aatcaactag
     7921 ctaaactacg ctaaccgctc tcggcggatt agctagctac ctcactaact ccgaaactga
     7981 agaaatatcg tcttcagttt ctacgtgtcg taagacacta atgctaaagc atcta
//
LOCUS       DASFQS010000091         7895 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.094, whole genome shotgun sequence.
ACCESSION   DASFQS010000091 DASFQS010000000
VERSION     DASFQS010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7895
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.094"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            545..886
                     /locus_tag="U1041_001808"
     CDS             545..886
                     /locus_tag="U1041_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768900.1"
                     /translation="MVLAESIDFKNGFIYYNYHDYTVEGGDHVYGDVIGFEDCVLMQS
                     TGLFDVNGKEIFEGDIVRMHSGELLPVKLHHGMFEPVCYYASRAFGRVGNVFENPELL
                     EHPDFREVLND"
     gene            1095..1355
                     /locus_tag="U1041_001809"
     CDS             1095..1355
                     /locus_tag="U1041_001809"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768901.1"
                     /translation="MTTADKIKYILQKTGWTRDQFATEMDVTTLSVYKWLDGRPPLQR
                     MLDKIDELYEQVKPYKPRVLAPRGKIRLVYPYYSHQRQPWEK"
     gene            1431..1853
                     /locus_tag="U1041_001810"
     CDS             1431..1853
                     /locus_tag="U1041_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArpU family transcriptional regulator"
                     /protein_id="HEM4768902.1"
                     /translation="MAFFPEVDFEKTKANAKRKLKEYPRWRRVANDVDGQKVTAVYTF
                     EPRQANGNPSRPVERLAINRVDAEAELEAIEYAINNLLNPTHRRILYEKYLYAGKRYD
                     FEIYNDLYLSEASFYTELNDALLSFAEQYRNGCLLVQN"
     gene            2076..3338
                     /locus_tag="U1041_001811"
     CDS             2076..3338
                     /locus_tag="U1041_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010922072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HEM4768903.1"
                     /translation="MKIFEKPLDWLKPYKNNPRDNDTAVEPVANSIKEFGFKVPIVAS
                     PDGEVINGHTRLKAAKLLGLKTVPVIIADDLTDEQVKAFRLADNKTSEIAEWNFELLF
                     DELSDIQNLDMALFGFEDADYQLDDVHEDDNSELEQDEETVQDSFVNYGDVFQLGRHR
                     LMCGDSTSAEDMAKLTDGATIDLYVTDPPYNVAYEGGTEEAMTIMNDSMDDASFRQFL
                     RDAFAVASTHLKPGGAFYIWHADSEGLNFRAAVKETGWLLKQNIIWVKNALVLGRQDY
                     QWKHEPCLYGWKDGGSHYFIDNRSLSTVIEEDEENLKEMSKSELIAYIKTMQENAPTT
                     IFYEDKPLRNSIHPTMKPLKLIARCVLNSSRKGDKVLDSFNGGGSTLMVCEQTERTCY
                     AMELDPIYVERTIRRWEEATGQTAVLIE"
     gene            3359..3787
                     /locus_tag="U1041_001812"
     CDS             3359..3787
                     /locus_tag="U1041_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001136855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein"
                     /protein_id="HEM4768904.1"
                     /translation="MANGQNLIVPSSDEARKNGKKGGIASGKARRKKANLKKAFETIL
                     QADVASPMIKKQLEEFGFEATNEMALAMVMMQKAMKGNVRAFEQISKLTSIDTKDALD
                     KKEQKERIKSLQLQNEVKMKAANDDDSTEQIIIVDRWTDD"
     gene            3780..5084
                     /locus_tag="U1041_001813"
     CDS             3780..5084
                     /locus_tag="U1041_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013794411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HEM4768905.1"
                     /translation="MIDIQKNINPHFKPVWRSVFPYNVLKGGRNSFKSSVIALLLVYK
                     MILAILKGQTVEIIVVRKVANTIYDSVYKKIKWALRKFGIHHQFRMYKSPFKITHKKT
                     GSTFHFYGQDDFQKLKSNEVGAVIAVWYEEAAEFKNAEEFDQSNSTFMRQKHPDYPFV
                     QFFWSYNPPRNPYEWINEWVESLRDANSYLIHESSYLDDELGFVTDQMLEEIERIKNN
                     DYDYYRYLYLGEPVGLGTNVYNLELFQRVDVLPTNERPVYQYFWLDTGHQQSATACIH
                     AVLCQSGNVYIVDTYYYSPAGKVIKKAPSILTRELHEYASKQSRLFPGAAIRNRTIDS
                     AEGAIRNEYFEKYNIAWHPVAKKRKIEMTEHVQSLLAQGRLFVCRTQKNDDYFMEEHK
                     RYTWDERTIMSDNPAVLKVDDHTCDALQYGIVDNLRDFGLAA"
     gene            5099..6634
                     /locus_tag="U1041_001814"
     CDS             5099..6634
                     /locus_tag="U1041_001814"
                     /inference="COORDINATES: protein motif:HMM:TIGR01542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM4768906.1"
                     /translation="MKIWETVNNLFRRGGDVVANLTSSNLDSILDHPKINLDENEVKR
                     VRENFRFYAGKHDKVKFRNTNGKNVEREFMGLNMTKEAASYIASLVFNEQCEIVVSRT
                     INDNGVNQLQDANEFIQHVFNHNKFKKNFSQYLEAMFATGGLAVRPYVDKGEVEFAWC
                     LADTFYPLRNNTNSISECAIANVTIRIENKKPIYYTLLEFHEWENDKYRITNELYRSE
                     RKEKLGHQVPINTIYENLQPVSYIRGLSRPLFGYLKPFGFNNINPRSALGLGIVDNAR
                     PTLERINVTSDEFYWEIKKGKRRRIVSDHFIQTQVNEQGVRMQYFDDDEDTFLALPGG
                     LGDMVNSDITPDIRSDKYIESINHFFGILEMQIKMSAGTFTFDGQGVKTATEVVSEDS
                     LTYRTRNSHITMIEEFIKELIISVFELASKTIMQDRKALYQGEIPEWDDIGLNFDDGI
                     FTNKNAELDYWSKALSSGIVSKKHAIQKILNLPEKEAQRMLDEINQERPDVSLVDKEL
                     YHE"
     gene            6627..>7895
                     /locus_tag="U1041_001815"
     CDS             6627..>7895
                     /locus_tag="U1041_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013794409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor capsid protein"
                     /protein_id="HEM4768907.1"
                     /translation="MSKLPFEQGDEQFTLEMNQAADVYHQLSIDLFINIIRRLKKRGT
                     ADLQREPYIWQLEKLNDLHMLTESNVKLIAGRAEVAESVLRDVISNEGYKVYKDTHEQ
                     LKRDTGQNIEPQRYVVKEALESYANQTTEELGNLINTRLPLSVQEVYRAIIEQTVAGV
                     VSGSKSAEQALNDTLTKWSDKGFYGFTDKAGRRWRADTYARNIIKTTSLRVYRDMRER
                     PAEEFGVDTFYYSMKSSARAMCSPLQHQIVTKGPAFEADETRVLSLLDYGYGTAGGCL
                     GINCGHYLTPFVIGVNQKPDLPEHLKGISQKQAEDNARAEAQQRAFEREIRKNKEKLR
                     IAREIGDKELIQKYKLRGLTLEGRYRTYLDDHRFLYRNIKREGYIRNAETYKNTYEIL
                     DNRLKKEYSDILQNLGDKAPKSYSDFKSLSS"
BASE COUNT         2655 a         1351 c         1790 g         2099 t
ORIGIN      
        1 agtgggctaa gcctgtggag gtggagtgat gtttgagttg tatttccgaa taaatgacaa
       61 cgagccagaa ctacaaggca catttgacac ggaagtagaa gctgaaaagt acatgcaacg
      121 tttgattgat accaggtcac gaatcaaaag ttggtatatt cggaagatac agcgtgatgg
      181 ctattggttg tacgattatg gcgcacataa tgcgttttat acgattaagg aggtgttaaa
      241 tgacgaccaa cgttgtccaa ttcataccga aacatgatat atgccatgaa tgctacaaga
      301 gaagagcaac aaagttgtgt gattttataa ttggtcagac agaaataaca ttctatcgaa
      361 gtttcagttt atttaaaaat cagcaaccaa ggtttcttac ctgtgacaag ccactctgtg
      421 ataattgttc taacagattt cacggtatgg atttatgtaa aaatcacaac aaaaaaatga
      481 caggaggcag aaaatgatac cgaagtttag attttttgga aaagttaatg atgggactac
      541 acacatggtt ctggctgaga gcatagattt taaaaacgga tttatttact ataactatca
      601 tgattatacg gtagaagggg gcgaccatgt atatggagat gtgattggtt ttgaggattg
      661 cgtcctcatg caatccacag ggctgttcga tgtcaacggc aaggagattt ttgaggggga
      721 tattgttaga atgcactcag gagagctttt accagtaaag ctacaccacg gtatgttcga
      781 gcccgtttgc tattacgcca gccgtgcctt tggaagggtt gggaatgttt ttgaaaatcc
      841 tgagttgtta gaacatccag attttaggga ggtactaaat gactaacgaa aaactaggcg
      901 tgctactggt cgatgtgcca gagccgaggt actttaagta ttactatata aaatttttcc
      961 gaaacagaga taggaaaaac atatgacata ttttggacgg attaccctga atgtgtggaa
     1021 aaacttgcct accgctgcac ccaagaagaa actaaaaaat acccacaatt tcggtgggta
     1081 gcgttggatg atttatgacc acagcagata aaatcaaata catcctgcaa aagacgggat
     1141 ggacgagaga ccaatttgcg accgagatgg acgtgacgac tctatctgtc tacaaatggc
     1201 tagacggacg accaccgcta cagcgcatgt tggataaaat agacgagctg tacgagcaag
     1261 tcaagcctta taagcctagg gtgctagctc cgagagggaa aattcggctg gtgtacccgt
     1321 attatagcca tcagcgacag ccgtgggaaa aataaaaaaa gccagcacta cttgtactga
     1381 ctatgtgaat aaaactctaa aactattata tcacagaaag gtatgagcag atggcttttt
     1441 ttccagaagt tgatttcgaa aaaacgaaag ctaatgcaaa acgaaaactg aaagagtacc
     1501 ctcgctggcg tagagtagcg aacgatgtag atggacagaa agttactgca gtgtacactt
     1561 tcgaaccaag acaagctaat ggcaatccta gcaggcctgt ggaacgcttg gcaatcaatc
     1621 gagtagatgc ggaagcggag cttgaagcaa ttgagtatgc cattaacaat ctactcaatc
     1681 cgacgcacag acgcattctt tatgagaagt atctttacgc aggcaagcgg tatgattttg
     1741 aaatctacaa cgacctgtac ttatcagaag ctagtttcta caccgaactc aacgatgcct
     1801 tgctatcgtt tgcggaacag tacagaaatg gatgtttgtt ggttcaaaat tagagttttc
     1861 aaaagttttt accaagaaat caaaagtttt tatgtagttt taaaagttag cgagacgtta
     1921 aaatggtagt atcaaataat tagatactac cgcctgaaag gcggtgatta tgatgtacaa
     1981 ataatgcaca aagggactct aaagcgatta ttctttatat ttcgaggtta atcggggctt
     2041 aataacattg agtccttttt ttgttggagg aaaagatgaa aattttcgag aagccattgg
     2101 attggttgaa gccttataaa aacaatccgc gagataatga caccgctgtt gagccagttg
     2161 caaactcaat caaagagttt ggttttaaag ttccgattgt cgcgagtcct gatggtgagg
     2221 ttattaatgg gcacacaagg ttaaaggctg ctaagttgtt gggacttaaa actgtccctg
     2281 taattattgc agatgactta acagacgaac aagttaaagc attcagactt gcagacaaca
     2341 aaacgtcgga gatagctgaa tggaattttg aattattatt cgatgagctc tcggatattc
     2401 aaaatttgga tatggcattg tttggctttg aagatgcgga ttaccagtta gatgacgttc
     2461 acgaagatga taactctgaa ttagaacaag acgaggaaac ggtccaagat tcatttgtga
     2521 attatgggga tgttttccag ttaggtcgtc atcgtttaat gtgcggggat agtacaagcg
     2581 cagaggacat ggctaaactg actgatggcg cgaccattga tttatacgtt actgatccgc
     2641 cttataatgt tgcatacgaa ggcggaaccg aggaagctat gacaatcatg aatgatagta
     2701 tggacgatgc tagttttagg caattccttc gtgatgcgtt tgcagtagca agtactcatc
     2761 taaagccagg aggggcgttt tacatctggc acgctgattc agagggactc aactttagag
     2821 cagccgttaa agaaacagga tggttactaa aacaaaatat catttgggta aaaaatgctt
     2881 tagttttagg tagacaagat tatcaatgga aacatgaacc ttgtctttat ggatggaaag
     2941 acggcggaag tcattatttt attgacaata gatcgttatc gacggtaatc gaagaggacg
     3001 aagaaaatct caaagaaatg tctaaaagcg aactcattgc gtatatcaag acgatgcaag
     3061 agaatgcccc gactacaatt ttttacgaag acaaaccact cagaaacagc atccatccta
     3121 caatgaaacc tttgaaacta attgccagat gcgtccttaa ttcgagtaga aaaggcgata
     3181 aagtattaga tagctttaac ggcggagggt caactcttat ggtttgcgaa caaaccgaaa
     3241 gaacctgtta cgcaatggaa ttggatccta tttacgtaga aagaacgatc agacgctggg
     3301 aggaggcgac gggacaaaca gctgttttga ttgaataaac aagtaaggaa gtgaggcgat
     3361 ggcaaatgga caaaacttga tagtcccaag ctcggacgaa gctcgaaaaa atggaaaaaa
     3421 aggcggtatc gcttcgggaa aggctcgacg taaaaaagcc aatttaaaaa aagcttttga
     3481 gacgattttg caagctgatg ttgccagtcc aatgataaaa aaacagttgg aagaatttgg
     3541 ttttgaggca acgaatgaaa tggctctcgc aatggtcatg atgcaaaaag cgatgaaagg
     3601 taacgtgaga gcttttgaac agataagcaa gttaacctcg attgatacca aagatgcact
     3661 tgataagaaa gagcaaaaag aacggattaa gtctcttcaa ttgcaaaacg aagtcaaaat
     3721 gaaagcggca aacgatgatg actcaactga gcaaataatc attgttgata ggtggaccga
     3781 tgattgatat ccagaaaaac atcaaccctc attttaaacc tgtatggcgc tccgtgtttc
     3841 cttacaacgt gctaaaaggt ggacgtaaca gtttcaaatc atccgttatt gcactacttc
     3901 tagtttacaa gatgattctt gctatcttaa aaggacaaac agttgaaatc attgtggtcc
     3961 gaaaagttgc aaatacaatc tatgattctg tttataagaa gatcaagtgg gcattgagga
     4021 agttcggtat ccatcatcaa tttaggatgt ataagagccc gttcaaaatt acacacaaga
     4081 aaacaggttc aactttccac ttctatggac aggacgactt ccagaaattg aaatcaaatg
     4141 aagtaggagc tgtaattgcc gtgtggtatg aagaagctgc tgaatttaag aacgcagaag
     4201 agtttgacca atccaacagt accttcatgc gacaaaaaca tccagattat ccttttgttc
     4261 aatttttctg gtcttacaac cccccaagaa atccatatga gtggataaat gagtgggtag
     4321 agagcttaag agatgctaat agctatctta ttcatgaatc tagctactta gatgatgaac
     4381 ttggttttgt tactgaccaa atgcttgaag agattgaacg tatcaagaat aatgactacg
     4441 attattatcg ttatctgtat cttggggagc ctgtgggtct aggtaccaac gtttacaatc
     4501 tggaactgtt ccaacgtgta gatgttttgc ctactaatga gcgacctgta tatcaatact
     4561 tctggctcga tactggtcat caacaatcag caactgcttg cattcatgct gtattatgtc
     4621 agtctgggaa tgtttatatt gttgacacat attactatag tccagctgga aaagtaataa
     4681 aaaaagctcc tagcatactg acaagggaac tacacgaata cgcttcgaag caatctcgtc
     4741 tgttcccagg ggcagctatt cgaaatcgaa caatcgattc tgctgaaggg gctattcgta
     4801 atgaatattt tgagaagtac aacattgcgt ggcatccagt agctaaaaaa cgaaaaattg
     4861 aaatgacaga acatgtccaa agcttactag ctcaaggcag gttattcgtc tgcagaactc
     4921 aaaaaaacga cgattatttc atggaagagc ataaacgtta tacatgggat gaaagaacca
     4981 tcatgagtga taatccggct gtcttgaaag tggacgacca cacatgcgat gcacttcagt
     5041 atggcatcgt agataattta cgagactttg gacttgctgc ttaggaggtg acaagagttt
     5101 gaaaatatgg gaaacggtaa acaatttatt tagaagagga ggcgacgttg tggccaatct
     5161 aacaagtagc aatctagatt cgatattgga tcatccgaag attaatttgg atgaaaatga
     5221 agtgaaaagg gtacgcgaaa actttcgatt ttacgcaggt aagcatgaca aggtaaaatt
     5281 ccgcaataca aatggaaaaa atgttgagcg tgaatttatg ggcctgaata tgacgaaaga
     5341 agctgccagt tatatagcca gtcttgtatt taatgagcaa tgtgaaattg tagttagtcg
     5401 aaccataaac gacaatgggg taaatcaatt acaagatgca aacgaattta ttcagcatgt
     5461 ttttaaccac aataagttca aaaagaattt tagtcagtat ctagaagcta tgtttgctac
     5521 tggtggtctt gcagttcgtc catatgtgga taaaggagaa gttgagtttg cttggtgttt
     5581 agcagataca ttttatccgc taaggaataa cacaaatagt attagtgagt gtgcgattgc
     5641 gaatgtcacg atacgcatcg aaaataagaa acccatttat tacactcttt tagaatttca
     5701 tgagtgggaa aacgacaaat atcgcattac taacgaactc tatcgttctg aacgtaagga
     5761 aaaactagga catcaagtac caattaacac tatctatgaa aacttgcaac cagtaagcta
     5821 tattaggggt ttatcacgtc cgttgtttgg gtatctaaaa ccttttgggt ttaacaatat
     5881 caatcctagg tctgctcttg gcctgggaat tgtggacaat gctagaccaa ctctagaacg
     5941 cataaatgtt acatctgatg aattttactg ggaaatcaaa aaaggcaagc gtcgcagaat
     6001 agtatcagat catttcattc aaacacaagt caacgagcaa ggtgttcgca tgcaatactt
     6061 cgacgatgat gaggacacat tcctagccct gcctggcgga ttgggggaca tggtgaatag
     6121 cgatatcact ccggatattc gttctgacaa gtacattgag agtattaatc atttctttgg
     6181 gattttggaa atgcaaatca aaatgtctgc tggaactttc acatttgacg ggcagggagt
     6241 gaagacggct acagaagtcg tgtcagagga tagtttgacc tatagaactc gtaacagcca
     6301 cataaccatg attgaggagt ttatcaaaga gctcatcata tcagtatttg agttggctag
     6361 taagactatt atgcaagata gaaaggctct ttatcaagga gagattccag aatgggacga
     6421 cattggttta aactttgatg atggtatatt taccaataaa aatgcagagc ttgattactg
     6481 gtccaaggca ttatctagtg gtattgtgag caaaaaacat gctattcaaa agattctaaa
     6541 tttaccagaa aaagaagcac aacgtatgct tgacgaaatc aatcaagaga gacctgatgt
     6601 ttcgttagtt gataaggaat tgtaccatga gtaaactacc gttcgaacaa ggagacgagc
     6661 agttcacctt agagatgaac caagcagcag atgtttatca tcagctatca attgatttgt
     6721 ttatcaatat tattcgcagg ttgaagaaaa gaggtacagc cgacctacaa agagagccat
     6781 atatttggca acttgaaaaa ttaaacgacc tgcatatgtt gacagaaagc aatgtgaaac
     6841 taatagccgg tcgtgcggag gtcgctgaga gcgtcctacg tgacgttatt tcgaacgaag
     6901 gctacaaggt atacaaagat actcacgagc aattgaaacg cgatacaggt caaaatatag
     6961 agcctcagcg ctatgttgta aaggaagctt tggaatctta cgctaatcag actacagagg
     7021 aattaggaaa cctaatcaac acccgtctgc cgttaagtgt tcaagaggtt tatagagcta
     7081 tcattgaaca aacagttgca ggagtggtat ctggtagcaa gtctgcagaa caggcgctga
     7141 acgacacttt gacaaaatgg agtgacaaag gattttacgg ctttacggat aaagcaggtc
     7201 ggcgttggcg tgcagatacc tatgccagaa acatcataaa gactacgtca ttgagagtgt
     7261 atcgagacat gagagaacgt cctgcggagg agttcggagt tgatacgttt tactactcaa
     7321 tgaaatcaag cgctagagcc atgtgttctc cgttacaaca tcagattgtc acaaaaggac
     7381 ctgcttttga agcagacgaa actagagtgt taagtttatt agattacggc tatggaactg
     7441 caggaggttg tcttggtata aattgcggtc attatttgac accttttgtc attggagtta
     7501 atcaaaagcc agacttacca gaacatctta aaggtatttc tcagaaacaa gcagaggata
     7561 atgctagggc agaggctcaa caacgagcct ttgaaagaga gatacgcaag aacaaggaaa
     7621 aactgcgtat tgctcgtgaa atcggtgaca aggagcttat tcaaaaatat aaattaagag
     7681 gattgactct agagggtcga tatagaacat atcttgatga ccacagattt ttgtatcgta
     7741 atattaaacg ggaaggttat atcagaaatg cggaaacgta taaaaatacc tacgaaattc
     7801 ttgacaatcg gttgaaaaaa gagtattctg atatactaca aaatttggga gataaagcgc
     7861 ccaagtctta tagtgatttc aagtcgttaa gtagc
//
LOCUS       DASFQS010000092         7846 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.095, whole genome shotgun sequence.
ACCESSION   DASFQS010000092 DASFQS010000000
VERSION     DASFQS010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7846
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.095"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            281..1951
                     /locus_tag="U1041_001816"
     CDS             281..1951
                     /locus_tag="U1041_001816"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEM4768908.1"
                     /translation="MKTDIEIAQSVTLKPITEIVEKVGISFDDIELYGKYKAKLSFDK
                     INAVKDNAPGKLILVTAINPTPAGEGKSTITIGLADALSKIGKKTMIALREPSLGPVM
                     GIKGGAAGGGYAQVLPMEDINLHFTGDMHAITTANNALSALIDNHIHQGNVIGIDQRR
                     IIWKRVVDLNDRALRKVTVGLGGPLNGIPREDGFDITVASEIMAILCLATDINDLKER
                     LANIVIGYRFDRSPVYVRDLAVEGALTLILKDAIKPNLVQTIYGTPAFVHGGPFANIA
                     HGCNSVLATTTALRLADYTVTEAGFGADLGAEKFLDIKVPNLPKAPDAVVIVATLRAL
                     KMHGGVAKTELSTENVEAVKAGFSNLKRHVENIQKYGIPAVVAINEFVSDTADEIAAL
                     KELCAEIGVPVELASVWANGADGGVELAETVVATIDNQVANYQRLYKAEDSLEEKVTK
                     IVTQIYGGSGVVFEKKARNQLAEFAKNGWDKLPVCMAKTQYSFSDNQFALGAPTDFDI
                     TVREFVPKLGAGFIVALTGDVMTMPGLPKAPAALNMDVAADGTAIGLF"
     gene            complement(1991..2800)
                     /locus_tag="U1041_001817"
     CDS             complement(1991..2800)
                     /locus_tag="U1041_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018381403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HEM4768909.1"
                     /translation="MKEKFQMCKTYLPVVLATIGFVNGCKIIFGELGKPNGMEAKYPL
                     FLLTISLVAIYIIPLLVLTYSLAKRYNISKQVIGLSWLLGLTSSISFSELGHTAIGYF
                     LLEIVKASNNFLNDWGAAISGPLAEEIGKGLTVLLVLLICRKMTLKNALVSGVIVGLG
                     FQIMEDITFVFRDMFMNKLDGFETILERVGQAGWAHWVFTLLFAIGLVALLTKNTGMS
                     KAQGVFWIGASFGIHFLFNSPFNTGIFQTVFPILSILLGLLAYQTVEKLSE"
     gene            3016..4332
                     /locus_tag="U1041_001818"
     CDS             3016..4332
                     /locus_tag="U1041_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HEM4768910.1"
                     /translation="MEQYDLVVIGFGKAGKTLAGKLSAAGKKVALVEENPAMFGGTCI
                     NIGCIPTKTLLVAADKNWTFEQVMEQKETVTTRLRNKNEAVLKGSGAHLYQGHARFVA
                     DKVVEVVAGEESLQLTAETIVINTGAKSRVLPIPGLLDTAHVYDSTGIQNLETRPDKL
                     AIIGGGNIGLEFAGLYSKLGSQVTVYEASSAILPREEEVVAKLAKEYMEEAGVTFVLG
                     ANIEQVAAAGDQVAVTVNGETAIFDAVLYATGRVPNTADLGLENTAIERLENGAVKVD
                     DYCETTVPGVYAVGDVNGGPQFTYTSLDDFRIVFGKLTGTGTYNLSQRKSIPTSVFIT
                     PVLSRVGLTEKEAMEAGYDYIANELPVANMPRAHVNNDLKGIFKVIVDKESKLVLGAT
                     LFGRNSEELINLIAMAIDNKIPYTYFKTQIFTHPTMAENLNDVFNF"
     gene            complement(4521..5312)
                     /gene="ucpA"
                     /locus_tag="U1041_001819"
     CDS             complement(4521..5312)
                     /gene="ucpA"
                     /locus_tag="U1041_001819"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018658921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HEM4768911.1"
                     /translation="MKLLGKVALITGAAFGLGKGIAEVYVKNGAKICMIDRDEAVETT
                     AQELREKYHADIITHIADVREIIQLQKAVNKTVAAFGSLNIACCNAGVCRLAPFEEFT
                     EEMRDFHIDVNIKGVWNTCQVAIKEMLKGNGGSIVIASSVTGDIVADPGEAAYAMTKA
                     ATVGLTKCLAVEYAQKNIRVNCTQLGYARTPMVEQMALESNPENPEQIIEGIAKAVPM
                     KRLADPKEVGELFAFLGSDESSYITGAQIVIDGGATLPETVDMGV"
     gene            5557..6174
                     /locus_tag="U1041_001820"
     CDS             5557..6174
                     /locus_tag="U1041_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5052 family protein"
                     /protein_id="HEM4768912.1"
                     /translation="MKWNKKLALSAVLVASLFTLSACQSISNWWKNTKEEWIGLEMIV
                     RTFDENSQLIDEMSGKSLSISRNEEFDSVDAEGYSNADSSVLKVTLGNYEIDHVGSSL
                     IAAEEGLEDLFSKYQSTVDIANYDRSIPLVNRMVSSLKNDFTGKAKVVLIRSQNGTPL
                     ATYVGDKVSLYASDAPKTSELLIDGKRLIIYRCDYTIYDRELLEN"
     gene            6175..6684
                     /locus_tag="U1041_001821"
     CDS             6175..6684
                     /locus_tag="U1041_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM4768913.1"
                     /translation="MINIRSAQIEDAADLVAVYAPYVEKTAITFETEVPTVEAFASRI
                     EKTLEKFPYLVAVEEGKVVGYAYASTYYARAAYDWTVELSVYVSREVRGKGIGSLLYA
                     ALEEELTVRGFKNFLACIALPNPVSLALHEKRGYEQVAHFKKVGYKFGTWHDIVWLQK
                     SLVGKQNED"
     gene            6674..7327
                     /locus_tag="U1041_001822"
     CDS             6674..7327
                     /locus_tag="U1041_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM4768914.1"
                     /translation="MKIDELEKRLLAVADASQAQPMKAYMKNNFDFLGVRTPDRRKVA
                     RQFFKESKAQGIDWEFVETCWSKPYREFQYIAIDYLVTKKKDLVLADLPRLKKLAQSK
                     SWWDSIDGLDKLVGKIVLDNPEAKQTILEWSLDDDFWLRRIAIDHQLLQKEKTDTELL
                     EKILVNNLNQIEFFINKAIGWSLRDYSKTNPDWVRAFLKKYSSQMAGLSIREASKYI"
     gene            7336..7623
                     /locus_tag="U1041_001823"
     CDS             7336..7623
                     /locus_tag="U1041_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1905 domain-containing protein"
                     /protein_id="HEM4768915.1"
                     /translation="MSKVYEFVATIHPVPYKGGAYVIFPYDIREEFGKGRVKVHARFD
                     GHPYDGSIVNMGIKDEAGNVCYIIGIQKAIRAAIGKQAGDRVQVTIQERLE"
BASE COUNT         2247 a         1493 c         1769 g         2337 t
ORIGIN      
        1 gtgaagtgtt tttgtgcaag aaagcgttgg tttgttaatc aaggcaattt ttaaaggaat
       61 actgactctc ttttgaaaaa actaactaaa accagtctct tagatggaag tgtagagctt
      121 gatgagaatg cagtttttaa aaatttgtat ctgtttaagt aaagaaacct gtagtttttc
      181 tgaaaattcc gtacgttagt gcataaatag taaaaaatat gcgaaaataa gctgtggtat
      241 ggtataatgt ccataaaaaa taaggaaatt aggagctctc atgaaaacag atattgaaat
      301 tgcacaaagt gtaaccttga aaccaatcac agaaatcgtt gaaaaagttg gtatcagctt
      361 tgacgatatt gaactctatg gaaaatacaa ggcaaaattg tcctttgata aaatcaatgc
      421 ggtgaaagac aatgcgccag ggaaattgat cttggtgaca gctatcaacc caacgccagc
      481 tggtgaaggt aagtcaacca ttaccatcgg tttggcagat gccttgtcta aaattggcaa
      541 gaaaaccatg attgccctcc gtgagccttc tttgggacct gtcatgggga tcaaaggtgg
      601 agctgcaggt ggtggctatg ctcaggtctt gccaatggaa gacatcaatt tgcattttac
      661 aggcgatatg cacgccatca ccacagcaaa caacgccctt tcagccttga ttgataacca
      721 tatccatcag gggaatgtga ttggcattga tcaacgtcgt attatctgga aacgtgttgt
      781 ggacctcaac gatcgtgccc ttcgtaaggt aacagtggga ttgggtggtc cgctcaatgg
      841 tattcctcgt gaagatggat tcgatattac cgtagcttct gaaatcatgg cgattttatg
      901 cttggcaaca gacattaatg acttgaaaga acgtttggca aatattgtta tcggttatcg
      961 tttcgatcgc agtcctgtct atgtgcgtga tttggcggtg gaaggtgcct tgaccctcat
     1021 tttgaaagac gctatcaaac caaaccttgt ccagactatc tatggcacgc cagcctttgt
     1081 ccatggcggt ccatttgcta acatcgctca tggctgtaac tcagttctag caacaacaac
     1141 cgctctgcga ttggccgact ataccgtaac agaagcaggc tttggtgcag accttggagc
     1201 agagaagttc cttgacatta aggtgccgaa cttgcctaag gctccggatg cagtagtcat
     1261 tgttgccacc ctccgtgcgc ttaaaatgca cggtggtgta gccaagacag aactttctac
     1321 tgaaaatgta gaggcagtga aagctggttt ctctaacttg aagcgtcacg ttgaaaatat
     1381 tcagaaatac ggtattccag cagtcgttgc tatcaatgaa tttgtatctg acacagctga
     1441 cgaaattgcc gctttgaagg aactttgcgc tgaaattggc gtacctgtcg agttggcaag
     1501 tgtttgggca aatggcgctg atggtggtgt tgaattggct gagacagttg ttgctactat
     1561 tgataaccaa gtagcaaact accaacgtct ttacaaggct gaggatagct tagaagagaa
     1621 agtgaccaag attgttacgc agatttacgg tggctcaggt gtggttttcg agaagaaggc
     1681 tcgtaaccag ctggctgaat ttgctaagaa tggttgggat aagttgccag tctgcatggc
     1741 caagacccaa tacagcttct cagataatca gtttgccctt ggagcgccga cagactttga
     1801 cattacagtc cgtgaatttg ttccaaaatt aggagcaggc ttcatcgttg ccttaacagg
     1861 tgatgtcatg accatgcctg gtttgccaaa agctcccgca gctctcaaca tggatgtggc
     1921 ggcagatggg acagctatcg gcttgttcta acaagaatat aaaaaatccg ctcaaaggcg
     1981 gattttttgt ctattcagat agtttctcaa ctgtttgata ggcaagtaag ccaagtaaaa
     2041 tactcaagat aggaaacacc gtctggaaga tacctgtgtt gaatggtgaa ttaaagagaa
     2101 aatggattcc aaagcttgca ccaatccaaa atactccctg tgcttttgac atacctgtat
     2161 ttttcgtgag aagggctact aagccaatgg caaagagaag cgtgaaaacc caatgggccc
     2221 aaccagcttg accaacgcgt tcaagaatgg tttcaaagcc gtctaattta ttcatgaaca
     2281 tgtctctaaa aacaaaggtg atgtcttcca tgatttggaa acctaatcca acaatcactc
     2341 cgcttaccaa tgcatttttt agtgtcattt ttctacaaat gagcagtaca agtagaacag
     2401 ttagcccttt tccgatttct tctgccaatg gacctgaaat agctgcgccc cagtcattta
     2461 ggaaattatt actagcttta acgatttcga gcaggaaata tccgatagct gtgtgtccca
     2521 gttcagaaaa agagatgcta cttgttaagc ctaaaagcca gctaagccct ataacttgtt
     2581 tggagatgtt atagcgttta gctaaggaat atgtcagtac tagtaggggg atgatgtaaa
     2641 tagcaaccaa ggaaatggtt aggagaaaga gaggatattt agcttccatg ccatttggct
     2701 tacctaattc tccaaagata attttgcaac cgttgacaaa tccaatcgtt gctaagacga
     2761 ctggaagata ggttttacac atttgaaatt tttctttcat agttttacct ttctgtatta
     2821 ataaactggt gtatggatac attgtatcaa aaataagtac atttcgtcta ttattcacct
     2881 attttttatc taaaccttct cagttattgt aatgtttttt cctgcaacta ggactccata
     2941 ataggccgta gcagaattgt gccaaaaatt ttcttttttg atagactaat gttaaaaaaa
     3001 taaaaggagt attttatgga acaatatgat ttagtagtca ttggttttgg taaggctggt
     3061 aagaccttgg caggtaagct ttcagcagct ggaaaaaagg ttgccttggt tgaggaaaat
     3121 ccagctatgt ttggcggaac ctgtatcaat atcggttgta ttccaaccaa gactctcttg
     3181 gtagcagctg ataaaaactg gacttttgag caggtaatgg agcaaaagga aacagtcacc
     3241 actcgtctgc gaaacaaaaa cgaggcagtc ttgaaaggca gcggtgccca tctctatcaa
     3301 ggtcacgcgc gttttgttgc ggacaaggtt gtagaggtag ttgctggaga agaaagcctt
     3361 cagttaactg cggaaactat tgtcatcaat acaggtgcta agtcgcgcgt gcttccaatt
     3421 ccaggtttgt tggatacagc tcacgtttat gatagtacag gcattcagaa cttggaaact
     3481 cgtcctgaca agttggctat tatcggcggt ggtaatattg ggctggaatt tgctggtctt
     3541 tatagcaaac tcggcagcca ggtgacggta tatgaagcca gctctgctat tttaccaaga
     3601 gaagaggaag tagttgccaa gctagccaag gagtacatgg aagaagctgg cgtgactttc
     3661 gtgctcggag caaacatcga acaagtggca gcagcaggtg atcaagttgc tgtgacagtc
     3721 aatggtgaaa cggcaatctt cgatgctgtc ctctatgcga caggtcgtgt gccaaacacc
     3781 gctgacttgg gcttggaaaa tacggcgatt gaacgtttgg aaaatggtgc tgttaaggtg
     3841 gatgactact gtgaaaccac tgttccaggt gtctacgcag tgggcgatgt caatggcgga
     3901 ccacaattta cttacacatc cctagacgac ttccgtatcg tttttggtaa attgactggg
     3961 actggtactt acaacttgag ccaacgcaag tctattccaa ccagcgtctt tattacgcct
     4021 gtgctgtctc gtgttggtct gaccgagaag gaagccatgg aagcaggtta cgactatatt
     4081 gccaacgaat tgcctgttgc caatatgcca cgtgcccatg tcaataatga cctcaaaggt
     4141 atcttcaagg ttatcgtgga taaggaaagc aaactggttc ttggagcaac tctctttggt
     4201 cgaaattcag aagagttgat taacttgatt gctatggcga ttgacaataa gattccttat
     4261 acctacttca aaacacagat tttcacccat ccgacaatgg ctgagaattt gaatgatgtc
     4321 tttaattttt aatactatag ggagataagc ttcttgtatt agttgtgact acgtttccta
     4381 gactagtatc aagatcatcg agtgacctta tttcattgac tgactatgac cgtccgtaat
     4441 gggcggtttt ttataaccta aaaggagaat aacttgatga ggactcatct tattattctc
     4501 ctttttaatt acactgtgcg ttagacaccc atatcaacag tctctggcag agtagcccct
     4561 ccatcaatga caatttgggc tcctgttata taactacttt catcgctgcc aagaaaagca
     4621 aataattctc caacttcttt aggatctgct agtcgtttca ttgggactgc ctttgcaatt
     4681 ccctcgatga tttgctcggg gttttcagga ttagactcta aagccatttg ttctaccatt
     4741 ggagtacgtg cgtagcctaa ttgtgtacag tttacacgaa tatttttttg agcatattca
     4801 accgctaagc atttagttaa acctactgtt gcagcctttg tcatggcata agctgcttct
     4861 ccaggatctg ccacaatatc tcctgttact gaggaagcaa ttacaatact gcctccgttt
     4921 ccttttaaca tttccttaat agcgacttgg caagtattcc agacaccctt gatatttaca
     4981 tcaatatgga aatccctcat ttcttctgta aattcttcaa atggcgccaa gcgacagact
     5041 ccggcattgc agcaagctat gtttagagaa ccaaatgccg caacagtttt atttactgcc
     5101 ttttgtaatt gtattatttc acgaacatca gctatatgtg taatgatatc tgcatgatac
     5161 ttttctcgca attcttgtgc cgttgtctca acggcttcat ctctatctat catacagatt
     5221 ttagccccgt tttttacata gacttctgca attccttttc caagtccaaa tgctgcacct
     5281 gtaatcaggg caacttttcc aagcaatttc ataagagcac ctccttgtta atatatcaaa
     5341 ttaaatgtaa ccctttttgt acaaaaagtc aattgattat aaagaaagtt tgaaatgaac
     5401 ttattgatat ttattttatg tttcctcttt cttttacaaa atagctttca taaagtatgc
     5461 cagactattt tctgggataa aattgttatc tgcaagtaat tttggtattt actgtataac
     5521 atgttacaat aaggtatcaa ccactggagg ttttatatga aatggaataa aaaactagca
     5581 ctcagtgctg tactcgtagc aagcttgttt actttgtcag cctgtcagtc gatttcaaat
     5641 tggtggaaaa ataccaagga agaatggatt ggcttggaaa tgatagttcg gacatttgat
     5701 gagaattctc agctaataga tgaaatgtct ggtaagtcct tatcgatttc gcggaatgaa
     5761 gaattcgact cagtggatgc cgaaggctat tctaatgcgg attcgtctgt tttgaaggtg
     5821 acactaggta attatgaaat tgaccatgtt ggctcttcct tgattgctgc cgaagagggc
     5881 ttggaggatt tattttccaa gtatcaatcg acagtagata ttgccaacta tgatcgttct
     5941 attcccttgg ttaatcggat ggtttctagt ttgaaaaatg attttactgg taaggctaag
     6001 gtggttttga ttcgttcgca aaacggaacc ccgcttgcta cttatgtagg tgataaagtg
     6061 tctctttatg catctgatgc acctaagact tctgaactct taattgatgg caagcggttg
     6121 attatctacc gttgtgatta tactatttat gacagagaat tgttggagaa ctagatgata
     6181 aacattcggt cagctcagat agaggatgct gcagatttgg tggctgtcta cgctccttat
     6241 gtagaaaaga ccgctattac ctttgaaaca gaagtaccga ctgtggaagc cttcgcaagt
     6301 cgaattgaaa agaccttgga gaagtttccc tatctggtcg cagtagaaga aggtaaagtt
     6361 gtgggttatg cttatgcctc aacctattat gcccgtgctg cttacgattg gacggttgaa
     6421 ttgtccgttt atgttagtag agaggtgcgt ggtaaaggga ttggaagtct tttgtatgct
     6481 gccttggaag aggaattgac ggtgcgtgga tttaaaaact ttttagcctg tatcgccctg
     6541 cccaatccag tctcgcttgc tctccatgag aagaggggat atgagcaggt ggctcatttc
     6601 aagaaagttg gctacaaatt cggtacctgg catgatattg tctggcttca aaaatctctt
     6661 gtaggtaagc aaaatgaaga ttgacgaatt agaaaaacgt ttgttggctg tggcggatgc
     6721 cagtcaggcc cagcctatga aggcttatat gaaaaacaat tttgactttc tgggtgtgcg
     6781 aactcctgac cgccgaaaag ttgctaggca atttttcaaa gaatctaagg ctcagggaat
     6841 tgactgggaa tttgttgaga cttgctggtc taagccctac cgtgaatttc aatatatcgc
     6901 cattgattat ctggttacca agaaaaaaga cttggttcta gctgatttac cccgtttgaa
     6961 aaaactggct caaagtaagt cttggtggga tagtattgat ggattagata aactagtcgg
     7021 taagattgtt ttggacaatc cagaggccaa gcagacaatc ttggaatgga gtttggatga
     7081 tgatttctgg ttgagacgga ttgccattga ccaccagctt ctccaaaaag aaaagacgga
     7141 tacggaactt cttgagaaga ttttggtcaa caatctcaat cagattgaat ttttcattaa
     7201 caaggcgatt ggctggagtt tgcgagatta ttccaagacc aatcctgact gggtacgggc
     7261 ttttctaaaa aagtacagtt cccaaatggc aggcttatcc attcgtgaag ctagtaagta
     7321 catttaggag gaatcttgtc taaagtatat gaatttgtag caactatcca ccctgttcca
     7381 tataagggcg gagcctatgt catatttccc tatgatatac gagaagagtt tggcaagggg
     7441 agggtaaagg tacatgccag atttgatggt catccctatg atggttcaat cgtaaatatg
     7501 ggaatcaagg atgaagcagg caatgtttgc tatattatcg gtattcagaa ggctattcga
     7561 gctgccatag gtaaacaggc tggtgataga gttcaggtga ctattcaaga acgactggag
     7621 taacaggctt gcaaatcctt gagattatgg tagaatagat tcatgcgatg agccgagtag
     7681 tgactttgtc acattcgacg ctagggaggt cttcatttaa ttgaaacgca ggagcggacc
     7741 ttgaatagtt gtgtgaacct tctattctca tcggaaacga tgcccttgcc caccttttag
     7801 gtgggctttt ttgtatacta agtgaggctg ggcaaaaagc ccagga
//
LOCUS       DASFQS010000093         7835 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.096, whole genome shotgun sequence.
ACCESSION   DASFQS010000093 DASFQS010000000
VERSION     DASFQS010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7835
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.096"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(66..1520)
                     /locus_tag="U1041_001824"
     CDS             complement(66..1520)
                     /locus_tag="U1041_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768916.1"
                     /translation="MVEKNSHHLPLDEEKVLDFEVAKDLTIEEAVKKHKEIEAGVTED
                     DGLLDRYIKQHRAEIESQKFETKINPLPLVEVADEEKNQGHESAEEVEANESSLTEVG
                     EEIAPIVEELSVTPMETLEETVIASTVAMEGLSPVADDSSLELEEDEAEDLDHSEGAD
                     RDQKKKLFFWSAVGLSMIGVMATALVWMNSVNKSNTATSSSSTSTSQTSSTASSSTDA
                     NVAAFEQLYNSFFTDSSLTKLKNSEFGKLAELKVLLEKLDKNSDSYTKAKEQYDHLEK
                     AIAAIQAINGQFDKEVVVNGEIDTTATVKSGESLSATTTGISTVDSLLASVVNFGRSQ
                     QEVASATAASEAAVTSSQGADETVSTGVPATTEVASTTVSGSTTDFGIAVPAGVVLQR
                     DRSRVPYNQAMIDDVNNEAWNFNPGILENIVTISQQRGYITGNQYILEKVNIINGNGY
                     YNMFKPDGTYLFSINCKTGYFVGNGAGHSDALDY"
     gene            complement(1530..2687)
                     /locus_tag="U1041_001825"
     CDS             complement(1530..2687)
                     /locus_tag="U1041_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEM4768917.1"
                     /translation="MKKQFELIATAAAGLEAVVGREIRNLGYECQVENGRVRFQGDVK
                     SIIETNIWLRSADRIKIIVGQFPAKTFEELFQGVFNLDWENYLPLGCKFPISKAKCVK
                     SKLHNEPSVQAISKKAVVKKLQKHFSRPEGVPLQEMGAEFKIEVSILKDVATVMIDTT
                     GSSLFKRGYRVEKGGAPIKENMAAAILQLSNWYPDKPLIDPTCGSGTFCIEAAMLAKN
                     IAPGLKRSFAFEEWPWVEDQLVAALRKEAQASIKADLVLDIAGSDIDARMIEIAKKNA
                     FAAGVEQDIVFKQMRVQDLRTDKINGVIISNPPYGERLLDDEAIVTLYREMGQTFEPL
                     KTWSKFILTSDELFETRFGQQADKKRKLYNGTLKVDLYQFFGQRVKRQVQG"
     gene            complement(2741..3106)
                     /gene="rnpB"
                     /locus_tag="U1041_001826"
     ncRNA           complement(2741..3106)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="U1041_001826"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            complement(3250..3585)
                     /gene="gpsB"
                     /locus_tag="U1041_001827"
     CDS             complement(3250..3585)
                     /gene="gpsB"
                     /locus_tag="U1041_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HEM4768918.1"
                     /translation="MASIKFTTKDIFEQDFKIGFRGYDQDEVNDFLDDIMKDYDAYEA
                     IIKELKGEIARLKAQAANSPRTTLPTEESNDVLRTERPSSATNFDILRRLNRLEKEVF
                     GKQIVQGQE"
     gene            complement(3656..4195)
                     /locus_tag="U1041_001828"
     CDS             complement(3656..4195)
                     /locus_tag="U1041_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HEM4768919.1"
                     /translation="MDTKSLLVTGYRHTDLGIFSEKDPRLHIIKSAIRRNFIRFLEEG
                     VSWFILTGQLGFEYWSLEVLEDLRAEGYQLSIATIFPFENHGEQWNEANQAKLARFKQ
                     VDFVKYAYPRYENPGQFRDYNQFLLDNTTGCYLFYDSENETNLKYLYHMVLKKEGYNR
                     KTLTFEELNEEAENFSNSE"
     gene            4261..4878
                     /gene="recU"
                     /locus_tag="U1041_001829"
     CDS             4261..4878
                     /gene="recU"
                     /locus_tag="U1041_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HEM4768920.1"
                     /translation="MVNYPHKVSKKINRTSPISSQRVNFANRGMSFEAAINDSNQYYL
                     AHGIAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVFKRHYIDFEAKET
                     RQKASMPMKNFHAHQIEHMKQVVKQGGICFVLLHFSTLKETYLLPATHLIEFYQVDMG
                     SKSMPLTFIRQYGFEIQMGRFPSIPYLEIVEKNLLGGESFENYNN"
     gene            4847..7033
                     /locus_tag="U1041_001830"
     CDS             4847..7033
                     /locus_tag="U1041_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEM4768921.1"
                     /translation="MVNLLKTTTIKKALLITANILLAGAIIACLAGAALVVYYIQSAP
                     ELTEESLTATVSSKIYDKNGNLIADLGAEKRSNAKTEEIPTDLVNAIVAIEDQRFFNH
                     RGVDVIRIAGSLINNLSGGRLQGGSTLDQQLIKLTYFSTSVEDQNLKRKIQEAWLATQ
                     LERRNTKQEILTYYINKVYMSNGNYGMKTAALAFYGKELKDLTLPQLALLAGMPQAPN
                     QYDPYTNPEDAKARRDLVLAEMLEEKYIDNPQYEQAVLTPVTDGLQPLSTAATYPAYM
                     DNYLKQVVEEVEAKTGYNLLTTGMDVYTNVDPAAQQQLWNIYNTDMYVSYPDDLLQVA
                     STVVDVSNGKVVAQLGGRKQETNVSFGINQAVETNRDFGSTMKPITDYAPAFENGIYT
                     STADLILDGPYNYPGTTTPVNNWDKQYYGNISVKTAIQYSRNVTAVKALEATGLENAL
                     KFLNSVGINYPDIHYSNAISSNTSDTSSKYGASSEKMAAAYATFANGGTYYAPQYVNK
                     IVFSDGTVTEYAPKGTKVMSAETAYMMTDMMKAVMSSGYGLNASVSGVPMAGKTGTSN
                     YTDSETDTILASIPEANYSYMVVPDENFVGYSSQYAMAVWTGYTNRMTPILDSSMRIA
                     TDVYHNMMLFMHSDYTATDWEMPSGLVRYGSNYYLRGSRSLSNAYNTYTSSSTSSSSS
                     TETSETAEATTTSSETSSGTSTETATSSTETATTGNNPATGQTDGQ"
     gene            7092..7805
                     /gene="rsmG"
                     /locus_tag="U1041_001831"
     CDS             7092..7805
                     /gene="rsmG"
                     /locus_tag="U1041_001831"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004260112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEM4768922.1"
                     /translation="MKPEVFYKTLADQGIQLSDQQKHQFHRYFQLLVEWNEKINLTAI
                     TEESEVYLKHFYDSIAPILQGHIQNEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDS
                     LNKRINFLHLLAEELELEGVHFYHGRAEDFAQDKNFRAQFDLVTARAVARMQILSELT
                     IPYLKLNGKLIALKASSAEDELTQAKNALNLLFAKVIENHDYTLPNGDPRTLTIVEKK
                     KETPNKFPRKAGMPNKRPL"
BASE COUNT         2338 a         1769 c         1385 g         2343 t
ORIGIN      
        1 gattgaagaa aattgtccaa aatgaacttt ttcttcaatc tgaagcggct aaaccgcttt
       61 tttgcttaat aatccaaggc atcagaatga ccagcaccat taccgacaaa gtaacctgtc
      121 ttacaattta tagagaataa gtaggtccca tctggtttaa acatattgta gtagccattg
      181 ccgttgataa tattaacttt ttccaagata tattgattgc ctgttatata cccacgttgt
      241 tgcgagatag tcacaatatt ttcaaggata cctggattga aattccacgc ttcattgttt
      301 acatcatcaa tcattgcttg attataagga acacgactgc ggtcacgttg caagacgaca
      361 ccagctggta cggcaatacc aaagtcggtt gttgatcctg aaaccgttgt tgaagcgact
      421 tctgttgtcg ctggtacacc agtagataca gtttcatcag caccttggct gcttgtgact
      481 gcagcctcac ttgctgccgt agccgaagcg acttcctgtt gcgaacgacc aaaattcacg
      541 accgatgcca atagactgtc aaccgtacta atccctgtcg ttgtcgcaga aagagattct
      601 cctgatttaa ccgtcgccgt tgtatcaatt tcaccattaa caacgacttc tttatcaaac
      661 tgaccattaa tggcctgaat ggctgcaatg gctttttcaa gatgatcata ctgttcttta
      721 gctttggtat aactgtccga attcttatcc aatttttcca acagcacttt cagttctgct
      781 aatttaccaa actctgaatt ttttagcttg gtcaaactac tatccgtaaa gaaactatta
      841 tagagctgtt caaaagcggc cacattcgca tctgtcgaac ttgatgctgt cgatgacgtc
      901 tggcttgtac ttgttgaact tgaagaagtc gcagtattcg atttgttaac cgaattcatc
      961 caaaccagcg ccgtcgccat tacaccaatc attgaaagcc ctactgctga ccagaagaac
     1021 aatttctttt tctgatccct atctgcgccc tcactatggt ccaagtcttc ggcttcatct
     1081 tcttccaatt ctaaactaga atcatctgcc actggagata acccctccat tgctacggta
     1141 cttgcaatca ctgtttcttc caaggtttcc atcggagtta ccgaaagttc ttctacaata
     1201 ggagcaatct cctcaccaac ttccgtaaga gaagactcat ttgcttctac ctcttccgcg
     1261 ctttcatgtc cttgattttt ttcctcatca gccacctcaa ctaaaggaag aggattgatt
     1321 ttggtttcaa atttttgaga ttcaatttct gcgcgatgtt gcttgatata acgatccaag
     1381 agaccatcat cttctgtcac acccgcttca atctccttat gttttttgac tgcttcttcg
     1441 attgttaaat cttttgccac ttcaaagtct aaaactttct cctcatccaa aggaagatga
     1501 tgactatttt tttctaccac gatgtcctcc tatccttgca cttgacgttt cactcgttga
     1561 ccaaaaaatt gataaagatc cacttttagg gtcccattat atagtttgcg tttcttatcc
     1621 gcttgctgtc caaaacgggt ttcaaacaac tcatcactag ttagaataaa cttagaccat
     1681 gttttgagtg gttcaaaagt ctgccccatt tctcgataca gggtaacaat ggcttcatca
     1741 tccaacaaac gttctccgta aggtggatta gaaataatga caccattaat tttatctgta
     1801 cgcaagtctt gcacacgcat ttgtttgaaa acaatatcct gctcaactcc tgccgcaaat
     1861 gcattcttct tcgcaatttc aatcatacga gcatcaatat ctgatccagc aatatctaat
     1921 accaaatctg ctttgataga agcttgcgct tctttgcgta atgcagccac caattgatcc
     1981 tcaacccacg gccattcctc aaatgcaaaa cttctcttca aacctggggc tatatttttg
     2041 gccaacatag ctgcctcaat acagaaagtt cccgatccgc aagtaggatc aataagcggt
     2101 ttatctggat accaattcga taattgcaaa atagcagctg ccatattttc tttgattggt
     2161 gcgccacctt tttccacccg ataaccacgt ttgaacaaac tagaacctgt cgtatcaatc
     2221 atgactgtcg ccacatcttt caaaatcgac acttcaattt taaactctgc ccccatctct
     2281 tgcaagggaa ccccttcggg acgagagaag tgtttctgca gtttctttac aactgctttc
     2341 ttagaaatag cctgcacact tggttcatta tgcaatttcg atttgacaca tttggccttg
     2401 gaaataggga acttgcagcc tagaggcaag tagttttccc agtccaagtt aaaaactcct
     2461 tggaacaact cttcaaaagt ctttgctgga aattgtccaa caatgatttt aattctatct
     2521 gctgaacgca gccagatatt ggtttcgata atggatttta catctccttg gaatcgaaca
     2581 cggccatttt ccacttgaca ttcatagccg agattacgaa tttctcgacc cacaaccgct
     2641 tccagacctg ctgctgccgt cgcaatcaac tcaaattgtt ttttcatttt tttcctctac
     2701 aataaaagct agcagagcta gctacctatt ttatgcaatt ttctgtaagc catgttttgt
     2761 tccggtggta ctaggttcta ccaccttcga taaccatctg tctactgttc taaacagtca
     2821 ggatttctgt tcatttccat ccatcccatg ccccgaccaa agtttgggtt gctagcttga
     2881 ggggtttacc gcgttccatt ttttacgttt ccataaaaac ttcgtcactg tggcactttc
     2941 agatctactc tggcatatca aaagacttag ccattttaac cgccgtaacg cccaagggcg
     3001 tccctaggct tattgattcg cctagcacaa acactactgg catctcagcc agtgctagca
     3061 tggactttcc tcatggtaga aaactaccac gcgattatcc aaaaattgca ccttaattat
     3121 cttagaagtt gtatctacaa agcaagccac tttaaatcaa ggaatatctc tgacacaaat
     3181 acagaatgta tttgtgcaca agaaaattac tgcgaataaa gtgtcagttt aggtgtacaa
     3241 ttttctattc tattcttgac cctgaacgat ttgttttcca aatacttctt tctccagacg
     3301 gttcagacgg cggagaatat caaagtttgt cgctgaagat ggacgttctg tacgcaatac
     3361 gtcgttcgat tcttcagtag gaagagttgt tctgggagaa tttgctgcct gcgctttcaa
     3421 tctagcaatt tcgcctttta attccttgat aatcgcttca taagcatcat agtctttcat
     3481 aatatcatca agaaaatcgt tcacttcatc ttgatcatag ccacgaaaac caattttaaa
     3541 atcttgctcg aaaatatctt ttgtcgtaaa tttaatactt gccatctctc tctccctaat
     3601 ctaaaacgtc actactacta ttatattaaa aaaaataggg aaaaatcaag tcaaatcact
     3661 cagaatttga aaaattttca gcctcctcat tcaattcttc aaaggtaagc gtttttctat
     3721 tatatccttc tttctttaag accatgtgat ataaatattt caaattggtt tcattttcag
     3781 aatcgtaaaa taaataacaa cctgtcgtat tatccagtag aaactggtta tagtctctaa
     3841 actgccctgg gttttcatag cgtggatagg catactttac aaaatcaacc tgcttaaacc
     3901 gtgctaactt tgcttggtta gcctcattcc actgttcgcc atgattttca aatggaaata
     3961 ttgttgcaat actcagttga tacccctcgg ctcgtaaatc ttctaagact tctaaggacc
     4021 agtattcaaa acccaattga cctgtcagta taaaccaact aacaccctct tctaaaaaac
     4081 gaataaaatt cctacgaatt gcagatttaa taatgtgcag tcgaggatct ttttctgaaa
     4141 aaattcccag gtctgtatgt ctataacctg ttaccaaaag gctcttagta tccatttctt
     4201 gtactctttt cgctaattat ggtataatat gctgatatta ttttatcaag aaggagttct
     4261 atggtcaatt atcctcataa ggtgtcaaaa aaaatcaata gaaccagtcc tatttcatcc
     4321 cagcgagtaa actttgctaa tcgcggaatg tcttttgagg ccgctatcaa cgatagcaat
     4381 caatattacc ttgcgcacgg cattgctgtc attcacaaga agccaactcc cgtgcaaatt
     4441 gtaaaagttg attaccccaa acggagccgt gctaagattg tcgaggcata ctttcgacag
     4501 gcatctacca cagactactc tggtgttttt aaaagacatt atattgattt tgaagcgaaa
     4561 gagacacgcc aaaaagcatc tatgcccatg aaaaattttc atgcgcatca gatcgaacac
     4621 atgaaacagg ttgtaaaaca aggtggcatt tgttttgtcc ttcttcactt ttcaacatta
     4681 aaagaaacct atctcttgcc agccactcat ttgatcgaat tttatcaagt agacatgggt
     4741 agtaagtcga tgcctctaac ctttattcga caatacggct ttgagattca aatggggcgt
     4801 ttccccagca tcccatatct ggaaatcgtt gaaaaaaatc tattaggtgg tgaatctttt
     4861 gaaaactaca acaattaaaa aagctcttct aatcactgca aatattttac tggcgggggc
     4921 tatcattgcc tgcctggccg gagctgcatt agttgtttac tacatccaaa gcgctccaga
     4981 attgacagaa gaatctttga cagcaactgt gtcaagtaaa atttacgata agaacggaaa
     5041 tcttattgca gatttaggag cagaaaaacg ttcgaatgcc aagactgaag aaattccaac
     5101 agacttggta aatgcgattg tcgcaatcga agaccaacgc ttcttcaatc atagaggtgt
     5161 tgacgtgatt cgtattgcag gttccctgat taataacttg agcggaggac gtttgcaggg
     5221 tggctcgaca cttgaccaac agcttatcaa gctgacttat ttctcgacat ccgtagaaga
     5281 tcaaaatcta aaacggaaaa ttcaagaggc ttggctggct actcaattgg aacgccgcaa
     5341 taccaaacaa gagattttga cctactacat caacaaggta tatatgtcaa atggtaatta
     5401 cggtatgaag actgctgctc ttgcttttta tggaaaagag ttaaaagatt tgactcttcc
     5461 tcaattagct cttttagcag gaatgcccca agcgccaaac caatatgatc cttataccaa
     5521 tccagaagat gcaaaagcac gtcgcgattt ggtattggct gagatgctgg aagaaaagta
     5581 cattgataat ccccagtatg aacaagctgt tctaacacct gtaacagatg gtttgcaacc
     5641 actatctact gcagctactt atcctgctta tatggacaac tatctgaaac aagtcgttga
     5701 agaagttgaa gcaaaaacag gttacaactt gctgacaaca gggatggatg tctatacgaa
     5761 cgtcgatcct gccgcccagc agcaactttg gaatatctac aatacagata tgtatgtcag
     5821 ctatccagat gatttattac aggtagcttc aacggttgtg gatgtttcta atggtaaagt
     5881 cgttgcgcaa ttaggtggtc gtaaacagga gacaaacgtc tcgtttggta tcaaccaagc
     5941 cgttgaaacc aaccgcgact ttggttctac aatgaagcca atcacagact atgctcctgc
     6001 ttttgaaaac ggtatttata catctacagc agatttaatc ttagacggtc cttataacta
     6061 tcctggtaca acaactcctg tcaataactg ggataaacaa tactatggca atatctctgt
     6121 taagactgct attcagtatt cgcgaaatgt tacagccgtt aaagcattgg aagctacagg
     6181 cttagaaaat gccttgaaat ttttgaatag cgttggtatc aattaccctg atattcatta
     6241 ctctaatgct atttcaagta atacatccga tactagcagt aagtatggag caagtagtga
     6301 aaaaatggct gctgcctacg ctacttttgc caatggtggc acttactacg ctccacagta
     6361 tgtcaataaa attgtcttta gtgatggaac agtaacagaa tatgctccta aaggaaccaa
     6421 agtcatgtct gccgaaacag cctacatgat gaccgatatg atgaaggctg ttatgtcttc
     6481 cggttatgga ttaaacgctt ctgttagtgg agttcctatg gcaggtaaaa caggtacatc
     6541 aaactatacc gatagcgaaa cggatactat tctagcttca attccagaag caaattatag
     6601 ctacatggtc gttcctgatg aaaactttgt tggatattct agtcagtatg caatggctgt
     6661 ttggaccgga tacaccaatc gtatgactcc tatccttgat agcagcatgc gaattgcaac
     6721 agatgtctac cacaatatga tgctctttat gcattcggac tatacagcta ccgattggga
     6781 gatgccaagc ggactcgtac gttacggttc caattactat ctcagaggta gtcgctcact
     6841 atccaatgct tataacacgt acactagctc tagtacaagt tcttctagtt cgactgaaac
     6901 tagtgaaacg gccgaagcga cgacaacatc aagcgaaaca tcatctggaa cttccaccga
     6961 gactgcaact tcttcaactg aaactgcaac aacaggaaac aatcctgcga cgggacagac
     7021 agatggtcaa taagaaaatt cccagactct tctgggtttt tcttttgctt aaattatgat
     7081 aagataagat tatgaaacct gaagtatttt ataaaacctt ggcagaccaa ggtattcaat
     7141 taagcgacca acaaaaacac caatttcatc gctatttcca actattagtg gaatggaatg
     7201 aaaaaatcaa tctgacagct attaccgagg aaagcgaagt ctatctgaag catttctacg
     7261 attctatcgc tccaatcctg caaggccata ttcagaacga acctcttcgg cttttagata
     7321 ttggagctgg agctggattt cctagcctac ctatgaagat tatctttccg caactagatg
     7381 ttaccatcat tgattctctt aataaacgaa ttaacttttt acatttgctt gccgaagaac
     7441 tagagcttga aggtgttcat ttctatcatg gtcgtgcaga agactttgca caagataaga
     7501 acttccgtgc acaatttgac cttgtcacag cacgcgcggt tgcccgcatg cagattcttt
     7561 ctgaattgac tattccttat ttgaagctca acggaaaatt aatcgcactc aaggcgtcca
     7621 gcgcagaaga tgaattgacc caggcaaaaa acgcactcaa tctcctcttc gcaaaagtca
     7681 tcgaaaacca cgactatact cttccaaatg gcgaccctcg aacattgacc atcgtcgaaa
     7741 agaaaaagga aactccaaat aagtttccac gcaaagctgg tatgccaaat aaaagacccc
     7801 tttaaacata agaaaagcga ggctgggcaa aaagc
//
LOCUS       DASFQS010000094         7776 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.097, whole genome shotgun sequence.
ACCESSION   DASFQS010000094 DASFQS010000000
VERSION     DASFQS010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7776
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.097"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            90..1715
                     /gene="treC"
                     /locus_tag="U1041_001832"
     CDS             90..1715
                     /gene="treC"
                     /locus_tag="U1041_001832"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HEM4768923.1"
                     /translation="MTIDKRKVVYQIYPKSYKDTTGNGIGDLRGIIEKLPYLKELGID
                     MIWLNPFYPSPQRDNGYDISDYTAVNPDFGTMADFEEMVAVGKELGIEFMLDMVLNHC
                     STEHEWFQKALAGDKYYQNFFILRDQPTDWVSKFGGNAWAPFGETGKYYLHLFDVTQA
                     DLNWRNPHVREELFKVVNFWKDKGVKGFRFDVINLIGKDEVLEDCPINDGKPAYTDRP
                     ITHDYLKMMNNATFGAEKSFMTVGEMSATTIENCILYTAPEREELSMAFNFHHLKVDY
                     KDGQKWTIMDFDFEELKRLFHTWGEEMSVGNGWNALFYNNHDQPRALNRFVDVENFRK
                     EGATMLAASIHLSRGTPYIYMGEEIGMIDPNYDSMDDYVDVESINAYQMLLDQGHTPE
                     QAFKIIQAKSRDNSRIPMQWDASDNAGFSTGTPWLKAGKSYQTINVEQEKTGPIFTFY
                     QELIRLRKELPLISEGDYKAAYKDSQKVYAFERLLNGEKLLVLNNFFAEEVELDLADD
                     YAHGQVLISNYPDNKLGKKITLKPYQALAILVK"
     gene            1797..2447
                     /locus_tag="U1041_001833"
     CDS             1797..2447
                     /locus_tag="U1041_001833"
                     /inference="COORDINATES: protein motif:HMM:NF012655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4768924.1"
                     /translation="MAKSKSPDENRQLILDVARTLFLEKGYDQTSLTDIISQLGGLTK
                     GVVYHHFPSKGAILDALIGDADENLLSKEWPGNCAIEKIQYALITSLSDVEKLSFLQA
                     SQITLKSPNILAQQYELSYSLLIPKFQEVVRQGVTDGSISTDFPEEIAELLVVYFNLI
                     IGLRITELSPDDFLRKILFLKKLFESMKAPIISDKILALASDLSTKIGGQINETTH"
     gene            2431..3183
                     /locus_tag="U1041_001834"
     CDS             2431..3183
                     /locus_tag="U1041_001834"
                     /inference="COORDINATES: protein motif:HMM:NF014566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4768925.1"
                     /translation="MKPLTKLTCIGFCTLAFGAMVTSGLIAFLPQLALGDNIVTTVLM
                     AGLYIFLYYLFAKWLSRRLGISLIQFRITLVKPSQFWIVVAIFLPLTVLLVLYLLGGK
                     VTLTDDLVNSIFMGAIAAPIVEEMCFRGIMMHLLEQSFSRKVAILGPSVFFGLVHLLN
                     GSVSSLTALQLLIAGTLVGSLFSLATLQTGSILSSILVHSLWNLSTSILLFDNQTSLF
                     GGEYGVDVSPIASLAYLIVILLSMIAHRKKAS"
     gene            3241..3603
                     /locus_tag="U1041_001835"
     CDS             3241..3603
                     /locus_tag="U1041_001835"
                     /inference="COORDINATES: protein motif:HMM:NF020397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEM4768926.1"
                     /translation="MRQEFLNKVKNPVLKDRLEAIFAQIQQEFPSLTTEIKWNQPMFI
                     MDGTFIIGFSAAKAHISIAPETVTTETFAKDIKEAGYEATSYLFKIKEDQEVNWDLIL
                     HIIAFNMEEKKGYEKFWR"
     gene            complement(3687..4733)
                     /locus_tag="U1041_001836"
     CDS             complement(3687..4733)
                     /locus_tag="U1041_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM4768927.1"
                     /translation="MKRKKTNKPQHMRRKRKTPIMKNNKKMLYTSSLALSLFSTGMIS
                     TNVLAIEWAPRTVSEISPEIVQEEGKMTYTVQYGDTLSAIASAMNIDMDLLAKINQIA
                     DVNLIFPDTVLTTTVDQNNQVTQVEIEAPVQGNTNETVQATVDLTTNQVTVEDTVVPL
                     DQISSVTDLAPVEEVVEQPVAEAPVEEVVEQPVVEAPVEEVVEQPAVEAPVEQPVVET
                     PQVTALSTTTTSTSAYDVGLQPQVAAFRAEVANAFGITSFSGYRPGDSGDHGKGLAID
                     FMVPQSSALGDQVAAYAVANLASKNINYIIWKQRFYAPYDSIYGPAYTWNLMPDRGSI
                     TENHYDHVHVSFNP"
     gene            complement(4966..5949)
                     /locus_tag="U1041_001837"
     CDS             complement(4966..5949)
                     /locus_tag="U1041_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM4768928.1"
                     /translation="MEVQMKYKWATLGIGVIANELVQALQAMGGNLYSVANRTYDKGV
                     GFAQKYGIEKVYREIDEVFEDPEVDIIYISTPHNTHIHYLRKALKAGKHVLCEKSITL
                     NSEELAEAIQLAEENQVILAEAMTIFHMPIYRQLSEVVASGKLGDLKMIQMNFGSYKE
                     YDMTNRFFNKNLAGGALLDIGVYALSFVRWFMTEKPSQVLSQVKLAPTGVDEQVGILL
                     SNDAGEMATIALTLHAKQPKRGTIAYDKGYIELYEYPRGQKAVITYTEDGSQEVIEAG
                     ETAKALSYEVADMEKAVAGIENTMHLAFTQDVMEIMTQLRKEWGLVYPEET"
     gene            6034..6924
                     /locus_tag="U1041_001838"
     CDS             6034..6924
                     /locus_tag="U1041_001838"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000146880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HEM4768929.1"
                     /translation="MNTVVLEASAQQKQAMMAHYDRYRQTSKNPYIEAFFKLTGASLS
                     IYTSGKVVFQGEMAEQEASLWGYEPESSGQTTVPGQNLPMIGTDEVGNGSYFGGLAVV
                     ASFVRPEDHAFLKSLGVDDSKKMTDQKICQIAPLLKEKIPHQALLLSPKKYNEVIEQG
                     YNAVSVKVALHNQAIFLLLQKGVQPEKIVIDAFTSSQNYQKYLKKEANQFANPVTLEE
                     KAEGKYLAVAVSSIIARSMFLENLVQLGQLVGRSLPSGAGSKSDQVAASILKDYGMAG
                     LNETAKLHFANTQKAQKLLK"
     gene            6934..7563
                     /gene="lepB"
                     /locus_tag="U1041_001839"
     CDS             6934..7563
                     /gene="lepB"
                     /locus_tag="U1041_001839"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEM4768930.1"
                     /translation="MRAIQKTKRSPLVAFLAEWGIFLLFMAAFFASRYFIWNPVSVDG
                     HSMDPTLQHQEKLIMLKTTSIDRFDIVVASETDSNGKEKLIVKRVIGMPGDTIRYEND
                     VLYVNDQKVDEPYLDEYLAAFQKDKLQEVYSYNKQFQAVAQSAEAFTQDANGYVDFTV
                     TVPEGQYYLMGDDRLVSLDSRSVGTFSRENIKGEVVFRMWPLNRIGTVD"
BASE COUNT         2233 a         1835 c         1573 g         2135 t
ORIGIN      
        1 gaaccctgag aagcgaggtt ggtctttttg cccagcctcc tcctatcatt gcttatgcaa
       61 gaaggaaaaa tcaagaaaga gagagcaaaa tgacaataga caaacgaaag gttgtttatc
      121 aaatctaccc caaatcatat aaggacacga caggaaatgg tatcggggat ttacgaggaa
      181 ttattgaaaa acttccttat ctaaaggaat taggcattga catgatctgg ctcaatcctt
      241 tctacccaag tccgcaacgg gacaacggtt atgatatttc tgattataca gccgtcaatc
      301 ctgatttcgg caccatggcc gactttgaag aaatggtggc tgtcggcaaa gagctgggca
      361 tcgaattcat gctagacatg gtcctcaatc actgctcaac ggagcatgaa tggttccaaa
      421 aagccctagc aggcgacaaa tactaccaaa atttctttat cctgcgtgac cagccaactg
      481 actgggtatc taagtttggc ggcaatgcct gggctccctt tggagagact ggaaaatact
      541 acctccatct ctttgacgtg acccaagccg acctcaactg gcgaaaccct catgtccgcg
      601 aagaactctt caaggtggtc aacttctgga aagacaaggg tgtcaaaggc ttccgcttcg
      661 acgttatcaa cctgattggt aaggacgaag tcctcgaaga ctgcccaatc aatgacggca
      721 agccagctta taccgaccgc ccaatcaccc acgactacct caagatgatg aacaatgcca
      781 cctttggagc agaaaaaagc ttcatgaccg ttggggaaat gtctgccact accattgaaa
      841 actgcattct ctacacagct cccgagcggg aagaattgtc catggccttc aacttccacc
      901 atttgaaagt ggactacaag gacgggcaaa aatggaccat tatggacttt gactttgagg
      961 aactcaaacg cctcttccac acttggggcg aagaaatgtc cgtcggaaat ggctggaatg
     1021 cccttttcta caacaaccac gaccagcctc gtgccctcaa ccgctttgtt gatgtggaga
     1081 atttccgcaa agaaggagca accatgctgg ctgcctctat ccatctgtca cgcggtacgc
     1141 cttacatcta catgggcgag gaaatcggca tgattgaccc caattacgac agcatggacg
     1201 actacgtgga cgtggaatct atcaacgcct accagatgct cttggatcaa ggccacacac
     1261 ctgagcaagc cttcaagatt atccaagcca agtcccgtga caattcccgc atcccgatgc
     1321 aatgggacgc ttctgacaat gcaggcttct caacaggaac cccttggctg aaggctggca
     1381 aatcctacca aacaattaac gttgagcagg aaaaaacagg cccaatcttt accttctacc
     1441 aagaactcat ccgattgcgg aaagaactcc ctctgatttc agaaggagat tacaaggcag
     1501 cctacaagga cagccagaaa gtctatgctt ttgagcgttt actaaacggt gaaaaattac
     1561 tggtcctaaa caacttcttt gcagaagagg ttgaactaga cctggcagac gactacgccc
     1621 acggccaagt ccttatcagc aactaccctg acaacaaact aggtaagaaa atcaccctca
     1681 agccttatca agcattagcg attttggtta aataatcact gtatattccc tattgtaaag
     1741 taggggattt tttgatatgc tctttacata ccgacggtat gtaaatggag gacggaatgg
     1801 caaaaagtaa atcccctgac gaaaacagac agctcatcct cgatgttgca agaacattat
     1861 ttttagaaaa aggctatgac caaaccagtc ttactgatat tatttctcaa ctaggtggcc
     1921 tgaccaaggg agttgtgtat catcacttcc cctccaaagg agccattctg gatgctctga
     1981 ttggagatgc tgatgagaat ttattatcaa aagagtggcc aggaaattgt gcgattgaga
     2041 aaatccaata cgctctcatc acctcgcttt ctgatgttga aaaactatcc ttcttgcagg
     2101 catcgcagat taccctgaaa agtcctaaca ttttagcaca acagtacgaa ctatcctatt
     2161 cactgcttat tccgaaattt caagaagttg tgagacaagg tgtaacagac ggaagtattt
     2221 caactgattt tcctgaagaa attgccgaac ttctggttgt ctatttcaac ctcattattg
     2281 gcctacgaat tacggaactc tctcccgatg actttctacg aaaaattctc ttcttaaaaa
     2341 aactttttga aagcatgaag gcccctatta tcagcgataa aatccttgct ctcgcatctg
     2401 acctttctac aaaaattgga ggacaaataa atgaaaccac tcactaaact aacatgtatc
     2461 ggattttgta cacttgcgtt tggggctatg gtgacaagtg gcctgattgc ctttcttccg
     2521 caactggcac ttggtgacaa tattgttaca actgtactca tggcagggct ttacatcttc
     2581 ttgtattatt tatttgccaa atggctatct cgtcgattag gaataagcct aatacaattt
     2641 cggataacac tcgttaaacc aagtcaattt tggatagtcg ttgcaatctt tctcccacta
     2701 actgtcttgc tcgttttgta tttactaggt ggaaaagtga ctttgacgga cgatttagta
     2761 aactctatct ttatgggcgc tatcgctgct ccgattgtag aagagatgtg cttccgtggt
     2821 atcatgatgc atctactaga acaatctttt tcaagaaaag tcgctattct gggaccatcc
     2881 gtatttttcg gacttgttca cctattaaac ggatccgtta gctcactcac cgccctacaa
     2941 ttactcattg ctggcacctt agttggaagt ttattttcgc ttgctacttt gcaaacagga
     3001 agtattctat ccagtatttt agtccactcc ctttggaatc tctccacttc catccttctt
     3061 ttcgacaatc aaaccagctt gttcggaggt gaatacggag ttgacgtttc tccaattgca
     3121 agtctagcct atctcatcgt catccttctt agtatgattg ctcatcggaa aaaagcaagc
     3181 tgattgtttc tacaccattt tactcttcta tgttatcctg taaaaaagaa aggaaacatc
     3241 atgcgccaag aatttttaaa caaggtcaag aatcctgtct tgaaggacag gctcgaagca
     3301 atcttcgccc aaatccagca agaatttcca agtctaacca cagaaatcaa gtggaaccag
     3361 cccatgttta tcatggacgg aacttttatc attggattct ctgctgccaa ggcccatatt
     3421 tccattgcac ctgaaacggt tacgacggaa acctttgcca aggacatcaa ggaggcgggc
     3481 tacgaggcga cttcctacct cttcaaaatc aaggaagacc aagaggtcaa ctgggacctg
     3541 atcctccata ttatcgcctt taatatggag gaaaagaaag gttacgaaaa gttctggaga
     3601 taaaataaga aacttgtatc ccacaccttc caattaataa gcacgcaaaa atagccaagc
     3661 tcaccgtgag tttggctata attattttat ggattaaatg acacatgcac atgatcgtag
     3721 tggttttcag taatacttcc acggtctggc atcaggttcc atgtataggc tggaccatag
     3781 atactgtcat acggcgcata gaagcgctgt ttccaaatga tgtagttgat atttttagaa
     3841 gctaagtttg caactgcata agccgccact tgatccccaa gtgctgaact ttgtggtacc
     3901 atgaagtcaa ttgccaatcc cttaccatgg tcgccagaat caccaggacg gtaacctgag
     3961 aaagaagtaa taccgaaggc attagctact tctgcgcgga aggctgctac ctgaggttgc
     4021 aaaccgacat cataagcact tgtacttgtt gtagtggttg atagggctgt cacttgtgga
     4081 gtttcaacta caggctgttc tacaggtgct tctactgcag gctgctctac aacttcctct
     4141 acaggcgctt ctactacagg ctgttctaca acttcctcta caggtgcttc tgctacaggc
     4201 tgttctacaa cttcctctac gggcgctaag tcggtaactg atgaaatttg atccaaggga
     4261 acaaccgtat cctcaaccgt tacttgattg gttgttaggt caacagttgc ctgaacggtc
     4321 tcatttgtgt ttccctgaac aggagcttca atctcgacct gagtcacttg attgttttgg
     4381 tcaacagtcg tcgtcagtac cgtatcaggg aaaatcaagt tgacatctgc aatttgattt
     4441 attttcgcca gcaagtccat atcaatattc atagctgagg cgatggcaga taaggtatct
     4501 ccatactgaa cagtataggt catctttcct tcttcttgta caatttctgg gctaatttca
     4561 gaaacagtac gtggagccca ttcgatggct aaaacatttg tcgaaatcat ccctgtacta
     4621 aagagggaaa gagccaatga agatgtgtat aacatctttt tattgttttt catgataggt
     4681 gtttttctct tgcgacgcat atgttgtggt ttatttgttt tcttacgttt cattctgata
     4741 atcattcctt ttcatttggg ttgggtatat cttacctaaa tcagacctga aaaacaagtc
     4801 atttctgtct cttttaaata aactgtatcc actatgtaat cttagacatt tttcgtcatc
     4861 aaatccatat acttgtcaca taaccgacac attaaaaaaa gaacaagtag aaaactgcca
     4921 acaggccatc acttgttcct caatacttat ccaaataaag ttgctctacg tttcttccgg
     4981 ataaaccaag ccccattctt tgcggagttg ggtcatgatc tccatgacat cttgggtaaa
     5041 tgctagatgc atggtgtttt cgatgcctgc gacagctttt tccatatccg ccacttcata
     5101 agaaagagcc ttggctgtct cgcccgcttc gattacctct tgactaccgt cttcggtata
     5161 ggtaatgact gccttctgac cacgaggata ctcgtagagc tcgatgtagc ctttatcgta
     5221 ggcaatagta ccccgttttg gctgtttggc atggagggtc agggcgatgg tcgccatttc
     5281 ccctgcatca ttgctgagca aaatccctac ctgctcatcc acacctgtcg gagccaattt
     5341 gacctgagac aagacctggc taggcttttc cgtcataaac cagcggacaa atgacagagc
     5401 gtagacacca atatccaaga gggcaccgcc ggccaagttc ttattgaaaa agcggttggt
     5461 catgtcgtat tccttgtagc tgccaaagtt catctgaatc atcttcaaat ctcccagctt
     5521 gccactggca accacttcgc tcaactgacg atagattggc atgtggaaaa tggtcatggc
     5581 ttctgccagg ataacctgat tttcttctgc cagttgaatg gcttctgcta attcttctga
     5641 attaagcgta atagactttt cacagaggac atgctttcca gccttcaagg cctttctcaa
     5701 ataatggata tgggtattgt gaggcgtaga aatatagata atgtctactt caggatcctc
     5761 aaacacttca tcgatttctc gataaacttt ctcgatgcca tatttttgcg caaatcccac
     5821 acccttgtca taggtacggt tggccaccga ataaagattt cctcccatag cctgcaaggc
     5881 ctgaaccaat tcgttggcaa tgacacctat tcccagagtc gcccatttat acttcatttg
     5941 aacttccata gtctacctca ctttctcctt ctattatagt aaaaaccacc cttttctgca
     6001 cactctaact agcatttatg ttacaataag aacatgaata ccgttgtact agaggcgtct
     6061 gcccagcaaa aacaagccat gatggctcac tatgaccgct atcggcagac cagcaaaaat
     6121 ccttatatag aagcattttt caaactgacc ggtgccagcc tgtccatcta cacttctgga
     6181 aaagtcgttt ttcaggggga aatggcagag caggaagcca gcctctgggg ttatgagcca
     6241 gaaagctctg gacagacgac cgtacctggt caaaacctgc ccatgattgg gacagatgag
     6301 gttggaaacg ggtcttattt tggaggtttg gcagtcgttg ccagttttgt ccgcccagaa
     6361 gaccatgcct ttctcaagtc gcttggtgtg gatgattcca agaaaatgac agaccaaaaa
     6421 atctgccaaa tcgctcctct cttaaaagag aaaatccccc accaagctct gctattgtca
     6481 ccgaaaaaat acaacgaagt catcgagcaa ggctacaatg cggtgtctgt caaggtcgcc
     6541 ctgcacaatc aggctatttt cctactcttg caaaagggtg tccagcctga gaagattgtc
     6601 attgacgcct tcacttccag tcaaaattat caaaaatact tgaagaagga agcaaaccaa
     6661 ttcgccaacc ccgtcactct ggaagaaaag gctgagggta agtatctggc tgtggcagta
     6721 tcttctatta ttgcaagaag tatgttttta gaaaatcttg tccagcttgg tcaattggta
     6781 ggcagaagcc tgccttcagg agctggcagt aagtccgacc aagtcgcagc aagcatctta
     6841 aaagactatg gcatggctgg tctcaatgag actgccaaac tccactttgc caatacgcaa
     6901 aaagcacaaa aattattgaa atgaggaaaa aatatgagag caatccaaaa aacaaaacgc
     6961 tcaccactag tcgccttctt agctgaatgg ggcatctttt tactatttat ggcagctttt
     7021 tttgccagtc gatactttat ctggaatcct gtctctgtcg atggccattc catggaccca
     7081 acgcttcaac accaagaaaa actcatcatg ctaaaaacga cctctatcga ccgctttgat
     7141 attgttgtag ccagtgagac agacagcaac ggcaaggaaa aactgattgt caaacgtgtg
     7201 attggtatgc caggtgacac cattcgctac gaaaacgatg tcctctatgt taacgaccaa
     7261 aaagtggacg agccttactt agatgaatat ctagctgcat tccagaaaga taaacttcaa
     7321 gaagtctatt cttacaacaa acaattccaa gctgtggccc aatctgctga agctttcaca
     7381 caagatgcca atggttacgt agactttacc gtgacagtcc cagaaggaca atactacctg
     7441 atgggagatg accgccttgt ctcgctagat agtcgtagtg taggaacatt ttcccgtgaa
     7501 aacatcaaag gagaagttgt ctttcgcatg tggcctctca accgtattgg gactgttgat
     7561 taatactctt cgaaaatcaa aactatccgt tgtcaagagc cttgatgagt gaaaagctcc
     7621 ggtggagctt ttcagcctgt taccttgaaa caagacagta acagagttct atcatcagct
     7681 tcgtttccta ggctattttt gattttcatt gagtataaca caaacaagtt tggagcaaaa
     7741 agcacagtac cacttctcag agttcgtgtc aacatc
//
LOCUS       DASFQS010000095         7761 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.098, whole genome shotgun sequence.
ACCESSION   DASFQS010000095 DASFQS010000000
VERSION     DASFQS010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7761
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.098"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            5..1960
                     /locus_tag="U1041_001840"
     CDS             5..1960
                     /locus_tag="U1041_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEM4768931.1"
                     /translation="MPIKELSIDIETYCDIDLRKSGVYRYAEDDSFELLLFAVSVDNG
                     PVTVYDLNKEKLPQDILETLVDDRVIKWAFNASFERICLSNWLKKYHPDFLSDGFLSP
                     VSWRCSMIWSAYLGLPLSLEGVGTVLKLKDQKMREGADLIRYFCVPCKPTKVNGGRIR
                     NLPRHAPDKWSTFIDYNKCDVEVELAIKERVKNFPVPDFVWDEYHQDQIINDRGIGID
                     VDFVKAAIKIDGESKAKIQEELKALTGLENPNSVLQMIGWLRDHGVTTDSLDKKAVKE
                     LLKTVDETTAQVLKLRQQAAKSSVSKYQAMMNCVCKDGRARGMFQFYGANRTGRWAGR
                     LVQLQNLPQNHLTDLEEARELFQTGDLEATEPLYDTQDTLSQLIRTAFVPSEGKKFIV
                     CDFSAIEARVLSHLSGERWRSKVFEEGKDIYCMSASQMFGVPVEKHGQNSELRQKGKI
                     AELACGYGGSVGALKAMGALDMGLTEEELQPLVNSWRLANPNIVLFWWDVDRAVKTAV
                     KDLIPTSVHNIQFEVKSGILFINLPSGRKLSYVKPKMGENQFGGESVTYEGTGTAKRW
                     ERLESYGPKFVENIVQAISRDILAYSIKQLKDFKIVGHVHDEIIIECDQDQSLDEIAT
                     LMGHAPDWISDINLRADGYECSFYQKD"
     gene            complement(2006..2515)
                     /locus_tag="U1041_001841"
     CDS             complement(2006..2515)
                     /locus_tag="U1041_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000544985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III toxin-antitoxin system ToxN/AbiQ family
                     toxin"
                     /protein_id="HEM4768932.1"
                     /translation="MHEMKFYQIDTNYLNILRQIDGRVPHNKEFIGRKGKSRPYIGVM
                     LSIDNVDYFVPLSSKKKRSSFVVMPIYDDNNEQIATLMLNNMLPVPPKHRKLLNMEGV
                     RTTDPKYFDLLMNELNFLRPKREAIKSRCSIIRSVKVDGKNKPQINERTKEFCLELIE
                     LEKAYKENE"
     gene            complement(2722..3318)
                     /locus_tag="U1041_001842"
     CDS             complement(2722..3318)
                     /locus_tag="U1041_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768933.1"
                     /translation="MTNKDNIYNECQKQECSLEVGLLEGQVLAPMLVENQQVIEDMHL
                     KRETLRSWRPAKQLNVYVLVAFIPVYPEEYTQTERIYKDAVENFLSEFRTRKSKNIKE
                     IISYESWIDTDESSFHSSTKELEEFMFAEMLQVLLEKVRQADKDLYDITLGLLAKEFD
                     ESIEDVFARIGVKRSTGFYRLPKARALVAALLKELNPK"
     gene            3751..4875
                     /locus_tag="U1041_001843"
     CDS             3751..4875
                     /locus_tag="U1041_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000347290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768934.1"
                     /translation="MDFPTYFRILKKYLGDGATIPEFFRELIEMITDDDAEDVISASG
                     ITSNKADSTLISYTKPQRGITQRMANQLLYRVNSANMTESIESRPDETIQLLADEFHS
                     YYPDITAENASQRIPEIFVDFIRVKAGMGISTTAQKATFVNQSNQLKKQYGQFLLTEA
                     NNCCAFPGCDRPLILTSGNLATENYEVSVIEKDKDAEPLNLIALCPDCFLTYQADNRK
                     KTVIALKNVKKILVSTHNSQRPISDLKLDNGIVAVLTGLNKLKFDEYDISYDPKQLTD
                     KISPENNRTLYQMVKNQVIDNYLTIQKIIVNLDKQGKIDYEEIQYQMRSMYKKLKATK
                     HDNLAIFNTISEKLHKATLQDIYFCQMIVSYFIQKCEVLE"
     gene            4875..5099
                     /locus_tag="U1041_001844"
     CDS             4875..5099
                     /locus_tag="U1041_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768935.1"
                     /translation="MQLPNKLYSYQKSTLAYLPKVLNEIKSGNSNVKDIFHAISEELD
                     DPTDFLSIMDCLYALNAIEMSNEGEVNLCL"
     gene            5090..6748
                     /locus_tag="U1041_001845"
     CDS             5090..6748
                     /locus_tag="U1041_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000904398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2326 domain-containing protein"
                     /protein_id="HEM4768936.1"
                     /translation="MLIEMWSPVFKKNGQTRKPVRFHPGLNVIMGMDLADNSIGKSSS
                     LLVIDFIFGGNSYQKSIAVKKLGDHPIYFCFQFEKKFYFSRDTATPDIITYCNDDYSP
                     TGETMPLENFLNKLKKRYHLDSPELSFRLAMSGFFRIAGKNNQNTDFPLQVYSSQKSS
                     ESITTLIQLFNLYDNIARYKERLKDKSNQLTTFRNARKYAFISNLVGGKKQFEANVSE
                     IKRLEYDLSHLQDTHQDKIDSDDIEKNQQKIQLRNTKLELKNSLRDKQRRLKLLDISI
                     EFGLYPTESDLTELQRYFPDTNLKKLYEVEAYHKKLATILDSEFSTERETLSLEIEGL
                     ESQLTVLNRELQELGSIPNLSTEFLENYSKLTATINALKEQNEAYLKESSLSKEKSEA
                     DSDLKRSTEDILIELEGKINSKMREFNNILYPDIRKAPQINLKAYNSYSFYTPDDDGT
                     GTKFKGMILYDLAILYLTHLPALAHDSLLLSNISYQATEALLKLYDQSKSLNKQVFLS
                     FDKASSYSPEANKLLSENIVLRLSSDGNELYGISWNKGENSDEV"
     gene            6738..6947
                     /locus_tag="U1041_001846"
     CDS             6738..6947
                     /locus_tag="U1041_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000673009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4768937.1"
                     /translation="MKFSYNKLWKLLIDKGWTKTKLRQEAGISSSSLAKLGKGENITT
                     DILLKICIVLDCKIEDIVEIVDNAD"
     gene            complement(7323..>7761)
                     /locus_tag="U1041_001847"
     CDS             complement(7323..>7761)
                     /locus_tag="U1041_001847"
                     /inference="COORDINATES: protein motif:HMM:NF014038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEM4768938.1"
                     /translation="SDRGFTIRIRQIEGKLPKMQIKQSLDSNVNGVKRNREYEKNITT
                     IPNTISIDILEEMTGEKFDFSYNEVTNLGCLITTRLICNMKGCEIALDKNEYLNRVDY
                     ELEIEFNNNNKSALELLKFLELKVQESTLGKNKRFILGLKEQG"
BASE COUNT         2586 a         1508 c         1322 g         2345 t
ORIGIN      
        1 aactatgccg attaaagaac tcagcatcga cattgaaacc tattgcgaca ttgacttacg
       61 aaaatctggt gtctatcgct atgcggaaga tgacagtttt gaactccttt tgtttgcggt
      121 ttctgtcgat aatggaccag tgactgttta cgacttaaat aaagagaaat taccacaaga
      181 tatccttgag accttggtgg atgatagagt catcaaatgg gcattcaacg cttcatttga
      241 gcgaatttgt ctatcaaact ggctcaagaa atatcatcct gacttcttat cagatggatt
      301 tttatctcca gtttcatggc ggtgtagtat gatttggtcc gcctatttag gacttcccct
      361 ctcccttgaa ggagttggaa cagttctcaa actcaaagac caaaagatga gggagggagc
      421 tgacctcatt cgctacttct gcgtgccttg taagcctacc aaagtcaatg ggggacgaat
      481 tcgtaacctc cctcgtcacg cgcctgacaa gtggtctacc tttatcgatt acaacaaatg
      541 tgatgttgag gtcgaattgg ccatcaagga acgggtgaaa aacttcccag tacctgactt
      601 tgtttgggat gagtaccatc aggatcagat tattaatgac cgtggtattg gcatagatgt
      661 tgactttgta aaagccgcta taaaaataga cggagagagc aaagccaaaa ttcaagaaga
      721 gttaaaagcc ttaacaggtc ttgaaaatcc aaactcagtt ctgcagatga ttggctggtt
      781 acgagatcac ggagtaacta cagattcact cgacaaaaaa gctgtgaaag aactcctcaa
      841 aacggttgat gaaacaacgg ctcaagttct taaacttcgt cagcaagctg ccaaatcaag
      901 tgtttccaaa taccaagcaa tgatgaattg tgtgtgtaag gacggtcgtg caagaggaat
      961 gtttcaattt tacggagcta accgtacagg tcgatgggct ggccgtttgg tacagcttca
     1021 gaatctacct cagaaccacc ttactgatct agaagaagct agagaacttt ttcaaactgg
     1081 tgacttagaa gctactgagc ccctatacga tactcaggat accttatcgc aacttatccg
     1141 tactgctttc gttccaagtg aaggaaagaa attcattgtt tgcgactttt cagctatcga
     1201 agcccgagta ctgtctcact tatctggaga gagatggcgt agtaaggtat ttgaggaagg
     1261 gaaagatata tactgcatgt cagcctcaca aatgtttggt gtaccagttg aaaaacatgg
     1321 acaaaattcc gaactcaggc aaaaaggaaa aattgcagag cttgcttgcg gatatggagg
     1381 ctctgtcggt gcactcaaag ccatgggagc acttgatatg ggactaactg aggaagaact
     1441 ccaaccacta gtaaactcat ggcgactagc taatccgaat atcgttctct tctggtggga
     1501 tgtagacagg gcggttaaaa ctgccgtaaa ggacctaatt ccaacatctg ttcataacat
     1561 tcaatttgaa gttaaaagtg gcattttatt catcaaccta ccatctggtc gaaaactctc
     1621 ctacgtcaaa cctaaaatgg gcgagaacca atttggtgga gagtctgtca catatgaagg
     1681 aactggcaca gctaaacgct gggagagact tgaaagttac ggaccaaagt tcgtcgagaa
     1741 tattgtacaa gccattagtc gagacattct tgcttattct ataaagcaac taaaagattt
     1801 caagattgtt ggtcatgttc atgatgaaat catcattgag tgtgatcaag accaaagcct
     1861 tgatgaaatt gcaacattaa tgggacatgc accagactgg atatctgata ttaaccttag
     1921 agctgatggt tatgaatgtt ccttttacca aaaggattag acaaaaaaac ggttcattac
     1981 ctgtttgggt agtgaaccgt ttttcttatt cattttcttt gtaggctttt tctaactcaa
     2041 taagctccag acaaaattct ttagttctct cattaatctg aggcttattt tttccatcca
     2101 cttttacaga acgaatgatg gaacatcttg atttgattgc ttctctttta ggacgtaaaa
     2161 agtttaattc attcatcaac aaatcaaaat atttagggtc ggttgttctt acgccttcca
     2221 tattcaatag ttttctgtgt tttggaggta caggcagcat attatttaac atcaatgtcg
     2281 ctatctgttc attattatca tcgtaaatcg gcattactac aaatgaagac cgcttctttt
     2341 tagaactcaa gggaacaaaa taatcaacat tatcaataga caacatcaca ccaatatatg
     2401 gtctagattt tccttttcga ccaataaatt ctttattatg tggaactcta ccatcaatct
     2461 gacggagtat atttagataa ttagtatcaa tttgataaaa tttcatttca tgcatagttg
     2521 atattacact cacttacaaa aatagggttg cccgtcgaca acccttttaa aatttccagt
     2581 aaggcacgga atctccaaaa ttaaaacttc cagtaaggca cggaatctcc tgacgagtat
     2641 tttcttttta gagtcggtat tactctccga ctacttctat ttaaattata ccaaaaacat
     2701 cgctagtgtc aaatataaac actatttcgg atttaattcc ttcaataagg ctgccaccag
     2761 agcacgagct tttggcaaac gatagaaacc agtagaacgt ttaacaccaa tcctagcgaa
     2821 cacatcctca atgctctcat caaactcttt ggcgagtaag cccaaagtga tatcatacaa
     2881 gtccttatct gcttgcctta ctttttcaag taaaacttgt agcatttctg cgaacatgaa
     2941 ctcttccaat tctttagtag aactgtgaaa actggattca tctgtatcta tccatgattc
     3001 gtatgaaatg atttccttaa tattcttaga cttccgtgta cggaattcac ttaagaagtt
     3061 ctcaactgca tctttgtaga tacgttccgt ttgagtatac tcttcaggat agactggaat
     3121 aaaagcaacc aaaacataaa cattcagctg tttagccggt ctccaagacc gaagggtctc
     3181 tcttttaagg tgcatatcct caatcacttg ttggttctca actagcatag gagctagcac
     3241 ctgtccctct aaaagtccca cttctagcga gcattcctgc ttttgacatt cgttataaat
     3301 attgtccttg tttgtcatgt tttccacttt ctgtcttaag cagagaaacg tgacaagaca
     3361 aagaactatt aaaaagattt tctgaccaca tcagcaattc ctctgctagc tcatggtcaa
     3421 ctgactttac aagctgaact gcacacctaa cttgtactct taaagtcacg gtaaatcagt
     3481 ttcactcatt tacaaagtat catcattagg caacaactat ctcaaattac ctattagcgc
     3541 tattcggtaa tcaagatttt ttacattcgc aaactttttt atgcgttcgc aaatattttt
     3601 tcgaacatcg taatcctatc atggtataat aagactaatc actaacgatt actttgttcg
     3661 actctattgt attaaatgag attttgaatt aggggacagt ttagtacagt acggtacaac
     3721 ttggtacaaa aatgaaaagg agaacatcac ttggattttc ccacctattt tagaattctg
     3781 aaaaaatatc ttggagatgg cgcgactata ccagagtttt ttcgagaact cattgaaatg
     3841 attactgatg atgacgctga agatgtcatc agtgcttctg gtattacatc taacaaagca
     3901 gatagtacgc ttatctctta taccaagccc cagagaggta ttacacagag aatggcaaat
     3961 caattgctct atcgggtaaa ttcagctaat atgacggagt ctattgaaag tagaccagat
     4021 gaaactatcc agttactagc cgatgaattt cattcttatt atcctgatat tactgctgaa
     4081 aatgcctcac aaagaattcc agaaattttc gttgacttca ttagagttaa agcagggatg
     4141 ggaatctcaa ccacagccca aaaagctaca ttcgttaacc aatcaaatca actcaaaaaa
     4201 caatatggac aattcttatt gacggaagca aataactgtt gtgccttccc agggtgtgat
     4261 agaccactca ttctaaccag tggcaactta gccacagaaa actacgaggt ttcagtaatt
     4321 gaaaaagata aggacgctga accactaaat ctgatagccc tctgcccaga ttgtttttta
     4381 acttatcaag cagataatcg caaaaaaact gtaatagcat taaaaaatgt taaaaagatt
     4441 ctagtatcca cacataacag tcaacgacca atttctgact tgaagttaga taatggaatt
     4501 gtcgctgttt tgactggcct caataaactc aaatttgatg aatatgacat ctcctatgac
     4561 ccgaagcaat tgactgataa gatatcgcct gagaataatc gtacgctcta tcaaatggtt
     4621 aaaaaccaag ttattgataa ctacttaacc attcaaaaaa tcatcgtaaa tttggacaaa
     4681 caaggaaaaa ttgattacga ggaaattcaa taccaaatgc gatcaatgta taaaaagtta
     4741 aaggctacca agcatgataa tctagcgatt ttcaatacta tttcggaaaa actccataaa
     4801 gctacactac aggacatcta cttctgccag atgattgtct cttactttat ccaaaaatgt
     4861 gaggtacttg aataatgcaa ttaccaaata aactttactc ctatcaaaaa agcactctgg
     4921 cctatttacc taaagtgcta aatgaaatta aaagtggaaa ctcaaacgtc aaggatatct
     4981 ttcacgctat ctcagaagag ttggatgatc ctacagattt cctatccata atggattgct
     5041 tgtatgcatt gaacgccatt gaaatgtcta atgaaggaga ggtaaattta tgcttataga
     5101 aatgtggtcg cccgtcttta agaagaatgg gcaaactcgg aaaccagttc gatttcatcc
     5161 aggattgaat gttatcatgg gtatggattt agctgataac tctatcggaa aatcctcctc
     5221 cctattagtc attgatttca tttttggagg taacagctat caaaaatcta tcgccgttaa
     5281 gaaattaggc gatcatccta tctatttctg ctttcaattt gagaaaaagt tttatttttc
     5341 aagagataca gcaactccag acatcatcac atattgtaac gatgattatt ctccaactgg
     5401 cgaaacaatg cccctggaaa actttctgaa caaacttaag aaacgatatc atttagattc
     5461 tccagaatta tcattccgat tagctatgag tgggttcttt aggattgcag gaaaaaacaa
     5521 tcagaatacc gatttcccct tacaagttta ttcgagccaa aaatcttctg aatctattac
     5581 cactctcatc cagcttttta atttgtacga taacatagca cgatacaaag aacgcctgaa
     5641 ggataagagc aaccagttaa caacatttcg taatgctcga aaatatgcct tcatctctaa
     5701 cttagtgggt ggtaaaaagc aatttgaagc gaatgtctca gaaataaaaa gattggaata
     5761 tgatttatca cacctccaag atactcatca agataaaatt gactctgatg atattgaaaa
     5821 aaatcaacaa aaaatccaac ttagaaatac taagctggag ctaaaaaaca gtcttcgaga
     5881 taagcaaaga cgccttaaac tattggatat cagtatcgaa tttggtttat atcctactga
     5941 atctgactta acagagcttc aacgttattt ccctgatact aacctcaaaa aattatatga
     6001 agttgaagcc tatcataaga aattggcaac tattttggat tccgaattct caaccgaacg
     6061 tgaaacgcta agtcttgaga tcgagggatt agaaagtcaa ctgacagttt taaacaggga
     6121 acttcaagaa ctaggaagca tcccaaatct ttcaactgag ttcttagaaa actactctaa
     6181 actaacagct acaatcaatg cactgaaaga acaaaatgaa gcatacttaa aggagtctag
     6241 tctatccaaa gaaaagtcag aagcagactc tgacttgaag cgtagcaccg aagatattct
     6301 aatagagtta gaaggaaaaa tcaatagcaa gatgcgtgaa ttcaataaca ttctgtatcc
     6361 agatattcgc aaagctcctc aaattaatct aaaagcttac aacagctact ccttctatac
     6421 cccagatgat gatggtacag gaactaagtt caaaggaatg atattatatg atttagcaat
     6481 actttatcta actcatcttc cagcacttgc ccacgattca ttactcttga gtaatatcag
     6541 ctaccaagca accgaagccc ttttgaagct ctatgatcaa tcaaaatcat tgaataaaca
     6601 agtattctta tccttcgata aagcaagctc atattctcca gaagcaaata aactcttgtc
     6661 agaaaatatt gtattgagac tctctagtga cggaaatgaa ctctacggta tttcatggaa
     6721 caaaggagag aactcagatg aagtttagct acaataaatt atggaaactt cttattgata
     6781 aaggctggac caaaacaaag cttcggcaag aagcaggaat cagctcctcc tctctcgcaa
     6841 aattaggaaa aggggaaaat atcactactg atattctatt gaaaatttgt attgtacttg
     6901 attgcaagat tgaagatata gtagaaattg tcgacaatgc tgactaaata tcaataatat
     6961 tttgagttat atttaagaaa ttgccataaa aatatccccc tctcatgtac ttaatgagag
     7021 ggggattaaa taaaagcgat tttccacttc tttattgacc gtaaagctat cttctcctta
     7081 ctaattagaa tatcgacttc ttctattgaa ctatcaatta tggtaaagct ctaaatttta
     7141 cgaactacac caaaatgtcc acctcgaagt caataacatt catctcgttt atatcaaaaa
     7201 gaattacact ggctcattta caacaatgtg attatctaag gactataata gtgtagattg
     7261 taaataaatt taaatacttc ctataagaac ttttaagaaa ttctgtatat ataattagta
     7321 aattatcctt gttctttaag acctaaaata aatcgcttat ttttacctaa tgttgactct
     7381 tgaactttta gttccaaaaa tttaagtagc tccaatgctg atttgttgtt attattaaat
     7441 tctatctcta gttcataatc gaccctattt aaatattcat tcttatctaa ggcaatttca
     7501 cagcctttca tattacatat caaacgggtt gtaatcaaac atcctagatt agttacttca
     7561 ttataactaa aatcaaactt ctctcctgtc atttcctcca agatatcaat cgatattgta
     7621 ttgggaatcg tagtgatatt tttttcgtat tctctattcc tttttactcc atttacattc
     7681 gaatctaggc tttgtttaat ttgcattttt ggaagctttc cttcaatttg tctaattcta
     7741 attgtaaaac ctctatctga a
//
LOCUS       DASFQS010000096         7557 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.100, whole genome shotgun sequence.
ACCESSION   DASFQS010000096 DASFQS010000000
VERSION     DASFQS010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7557
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.100"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            156..1070
                     /locus_tag="U1041_001848"
                     /pseudo
     CDS             156..1070
                     /locus_tag="U1041_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003030066.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1063..1497
                     /locus_tag="U1041_001849"
     CDS             1063..1497
                     /locus_tag="U1041_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013904098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768939.1"
                     /translation="MDKLHAEMERTVSKTIDNKLVDYQISLSDNFYTKYLSYYDCPYT
                     QEVVKSHRKFFQDLSYYAIYQKLGEVTKISIQARLSELDTLVDISDNKDEFDTFFYKK
                     FQFKLPEIPFEEEKLELSSFDLKLQQALNYNPKEDEGLRKRR"
     gene            1510..1794
                     /locus_tag="U1041_001850"
     CDS             1510..1794
                     /locus_tag="U1041_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768940.1"
                     /translation="MDWFDYMIKASEQSRFNASHWFRYLRKVIFEDHSYLTDEDVEKL
                     LTSKELTDFQKVSLKYAIQEHTPTHDYVISLNKPAKLANVQKMMEKYKHG"
     gene            1787..2344
                     /locus_tag="U1041_001851"
     CDS             1787..2344
                     /locus_tag="U1041_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter peripheral membrane
                     component"
                     /protein_id="HEM4768941.1"
                     /translation="MDKMKPVFEALNQELSQANLRLTIICVGGYVLEYHGLRATQDVD
                     AFYEESQKINEIIARVGQRFNLNTDEELWLNNNVANMNKQPPLNLCETLYSFENLTVL
                     VAPIEYVLGMKMVSTREQDLKDIGAIIKYKHFRSPFNTFDGLKEMGFDSIDFSVLLEG
                     FSYAYGMDWLEEFFKENQDKLRRYY"
     gene            2458..3597
                     /locus_tag="U1041_001852"
     CDS             2458..3597
                     /locus_tag="U1041_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002415368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768942.1"
                     /translation="MKEICHLAQVFHSTYKISVLIKDDKNINIALGNIEVDKNLFPID
                     YDMSQYWIEDLPGFRIGVHPLGAVRCTFESDDKAMYVQIGPVMVENINPLMIYQGSND
                     NEWTVLDIRKFSEICVMMYYFALDKNLSFSIESLVNKLVQFFSTDIMGLQTSELSKRT
                     IEQSYQDLRTRLELVQNGDITTLKQLNRDQDYLNALFEFCNNEQSTKSMLTFCLYLSM
                     YYAIAGGLPIEMSGAISSYYGNRFSSLRKREESVAMYNSILEHFALSTADYRVSGVSS
                     DIAKAVRMIKRNINRQLTIQSICTEIGLSQYHFMRKFKIDIGMTVGAYIKKEKIAYAK
                     FLLVYTNQSISEISEYLIFNSQSYFTSVFKKETGKTPFEYRKSDL"
     gene            3928..5895
                     /gene="optrA"
                     /locus_tag="U1041_001853"
     CDS             3928..5895
                     /gene="optrA"
                     /locus_tag="U1041_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002360182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein OptrA"
                     /protein_id="HEM4768943.1"
                     /translation="MSEATFAIASTNAKEDMKMQYKIINGAVYYDGNMVLENIGIEIN
                     DNEKIAIVGRNGCGKTTLLKAIIGEIELEEGTGESEFQVIKTGNPYISYLRQMPFEDE
                     SISMVDEVRTVFKTLIDMENKMKQLIDKMENQYDDKIINEYSDISERYMALGGLTYQK
                     EYETMIRSMGFTEADDKKPISEFSGGQRTKIAFIKILLTKPDILLLDEPTNHLDIETI
                     QWLESYLRSYKSTLVIISHDRMFLNRIVDKVYEIEWGETKCYKGNYSAFEEQKRENHI
                     KQQKDYDLQQIEIERITRLIERFRYKPTKAKMVQSKIKLLQRMQILNAPDQYDTKTYM
                     SKFQPRISSSRQVLSASELVIGYDTPLAKVNFNLERGQKLGIVGSNGIGKSTLLKTLM
                     GGVAALSGDFKFGYNVEISYFDQQLAQISGDDTLFEIFQSEYPELNDTEVRTALGSFQ
                     FSGDDVFRPVSSLSGGEKVRLTLCKLLYKRPNVLILDEPTNHMDIIGKENLENILCSY
                     QGTIIFVSHDRYFTNKIADRLLVFDKDGVEFVQSTYGEYEKKRMNSEKPFNNIKVEQK
                     VEKNNTVKGDRNSIEKEKVKKEKRIEKLEVLINQYDEELERLNKIISEPNNSSDYMVL
                     TEIQKSIDDVKRCQGNYFNEWEQLMRELEVM"
     gene            6825..7268
                     /locus_tag="U1041_001854"
     CDS             6825..7268
                     /locus_tag="U1041_001854"
                     /inference="COORDINATES: protein motif:HMM:NF038196.1"
                     /note="N-terminal region resembles flavodoxins. C-terminal
                     ferrodoxin region binds two 4Fe-4S clusters; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EFR1 family ferrodoxin"
                     /protein_id="HEM4768944.1"
                     /translation="MTILYFTATGNSLYVAKRLGGKLISIPQMIKENKYEFSDERIGI
                     VFPVFHVNIPPYIRDFLERSIFNCKYLFVIATYGEYAGSTADEVKKILDKRSIPANYI
                     NNIQMLDNFIPAFDMNEQRERDAIKNIEGQIDVVQEQSIQSLHSV"
     gene            complement(7222..7557)
                     /locus_tag="U1041_001855"
                     /pseudo
     CDS             complement(7222..7557)
                     /locus_tag="U1041_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001072197.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         2663 a         1070 c         1477 g         2347 t
ORIGIN      
        1 tgcgttcata caaatcaatt cctttgctat ttttataaaa ctattatatc acaaaaggta
       61 atttctgaaa agaagtatat ccatatttac actattttgt tgacttctat gttttaaatg
      121 atataatggt tttagaatat gaaaggagta gagagatgct aggtgaattt aagtcattgt
      181 acgatttgat gaatgctttt ccaaacgatt attactgtga gtgacattta gaaaaaattc
      241 gttggaatgg ctatgtggtc agtccttttg atgaaacgtc taaggtttat aaatgcaaga
      301 atggtaaata tagatgtaaa aacagtggta aatactttaa tgttcggact ggtacaatgt
      361 ttgataatac taaagtctcc cttcaaaaat ggtttatagc tatctggcta atgacatctc
      421 ataaaaaggg tatctcctct ctgcaactat caaaagacat ccacgttaca caaaaaacgg
      481 cttggtttat gctagagcgt attcgtagat gtttcggttc agaaaataat aatgaattgg
      541 acggaactgt agaagtagat gaaacctaca tcggtggtaa aaataagaat cgacataact
      601 ccaaaaaagt taaaaatgcc caaggtcgct ccctaaaaga taaaatccca gttgttggga
      661 tggttgcacg agaaggaaaa ttgaatgctc ataaagtagc cgatacaggc acaaaaactt
      721 taacagagca gattgtaaaa tttgtgaaag acactgctca actttacact gatgaatggt
      781 taggttataa taaagttgcg aaaatgtacg accatgcttt tgtaaatcat ggtgctcgtg
      841 aatatgtaat tgatgatgtt tatacaaata cgattgaagg tttttgggca ggtctcaaac
      901 gtggtgtact gggaatctac cattcttggt ctaagaaaca tctacaagat tatgtagatg
      961 agtttgtctt ccgttataat acccgaagca tggctgacaa cgaccgtttc aatcttctat
     1021 tggcatcttc agaagttcgt actacataca aggagttagt ccatggataa actacatgca
     1081 gaaatggagc gaacagtttc taaaacaatt gataataagc tagtagatta tcaaatttct
     1141 ctctctgata atttttacac caaatatctt agttactatg actgccctta tactcaggaa
     1201 gtagttaaat cacaccgaaa atttttccaa gacctatcct attatgcgat ttatcaaaaa
     1261 cttggagaag tcacaaaaat tagcatacaa gctcgacttt ctgagttaga tactttagta
     1321 gatatttcag acaataaaga tgaatttgat actttctttt acaaaaagtt tcagtttaaa
     1381 ctacctgaga ttccatttga ggaagaaaag ctagaacttt ccagttttga tttaaaattg
     1441 caacaggctc taaattataa tcctaaagaa gatgaggggc tgagaaaaag aagataagga
     1501 aggtgcaaga tggattggtt tgactacatg ataaaggcat cagagcaatc acggtttaat
     1561 gctagtcatt ggtttcgcta tttgcgaaaa gttatttttg aagaccattc ttatttgact
     1621 gatgaagatg ttgaaaaatt attaacctcc aaagaactaa cagattttca aaaggttagt
     1681 ttgaaatatg ctattcaaga acacacacca actcatgatt atgtgatttc gttaaataaa
     1741 cctgccaaat tagccaatgt acaaaaaatg atggagaaat ataagcatgg ataaaatgaa
     1801 acctgttttt gaagccttga atcaagagtt atctcaagcc aatcttcgtt taaccatcat
     1861 ttgtgtaggt ggttatgtcc tagaatacca cggtttgcga gctacacaag atgtggatgc
     1921 tttttatgaa gaaagtcaga aaatcaacga aattatcgct cgtgtagggc aacgctttaa
     1981 tttgaatact gacgaagaac tatggctcaa taacaatgtg gcgaatatga acaaacagcc
     2041 accattgaat ttatgtgaga ccctatattc atttgaaaat ctaactgttt tagttgctcc
     2101 aattgaatac gtattgggta tgaaaatggt tagtacaaga gagcaggatt tgaaagatat
     2161 tggagcaatt atcaaataca aacacttccg ttctccgttt aatacctttg atggtttgaa
     2221 agaaatggga tttgatagca ttgatttctc cgttctccta gaaggcttca gttatgccta
     2281 tggcatggac tggttagaag aatttttcaa agaaaatcag gataaactga gaagatatta
     2341 ttgatagtca agatagaaga aaagacaatt tcctagtttg gaagtcgcct tttttgcata
     2401 ttctcggaaa cactacatat cgtggttggt gtaaacagat atatagttcc ctaaagaata
     2461 aaagaaatct gccatctcgc acaggtattt cactcaacct ataaaatttc agttctaata
     2521 aaagatgaca agaatataaa catagctctt ggtaatattg aagttgacaa gaatttgttt
     2581 cctattgatt atgatatgag ccaatattgg attgaagatt taccaggatt cagaatcgga
     2641 gttcatcctc ttggtgctgt ccgatgcaca tttgaatctg atgataaagc aatgtacgtt
     2701 cagattggtc cagtgatggt agagaacatt aacccattga tgatttatca gggaagcaat
     2761 gacaatgaat ggactgtgct cgatatcaga aagtttagtg aaatatgtgt gatgatgtat
     2821 tactttgcat tagataagaa tttatctttt tctattgaga gtttagtgaa taaactggta
     2881 caattttttt cgactgatat catgggacta caaacgtctg agctttcaaa gcggacgatt
     2941 gaacaaagtt atcaggactt acgaacaaga cttgagcttg tccaaaatgg tgatataact
     3001 acacttaaac agctgaaccg ggatcaagat taccttaatg cactttttga attttgtaat
     3061 aatgaacaat caacaaaatc catgctgaca ttctgtctgt atctatcgat gtactatgct
     3121 attgctggcg gtcttcctat tgaaatgtca ggtgcaatca gtagctatta cggaaatcgc
     3181 tttagttctc tgagaaaaag agaagagtcc gttgctatgt ataacagtat tttggagcat
     3241 ttcgctttaa gtactgcaga ttatagagta tctggtgtct cttcagacat agcaaaagca
     3301 gtcaggatga ttaaaagaaa tatcaaccgt cagctcacca ttcagtcaat atgcacagaa
     3361 attggtctaa gtcagtatca cttcatgcgt aaattcaaga tagatatagg tatgactgtt
     3421 ggtgcataca ttaagaagga gaaaatagca tatgccaaat ttctattggt atatacgaat
     3481 cagtcaatat cagaaattag tgaatatctt atatttaact cacaaagtta cttcacatcc
     3541 gtgtttaaaa aagaaacagg aaaaacgcct tttgaatata gaaagagtga tttgtaaagc
     3601 tgatggctaa tgcaaagaat caattgcggc aatccttttg tatctttttc cagtgtggct
     3661 gcggtttctg ttgacgggaa cagcagggca tatgcggaat ctggtgtcgg atgagataac
     3721 ggatcagtta ctttgttttt atcagaaaag gtgtaagcta aaacttaggt tagccattgc
     3781 gctagcgatt tggtacaata agggggaagt tgaattatat ttgaaacgat aggagggaga
     3841 agcaaatgaa atctacaact aaagtaacat ttaaagaact tcatgtatag gtggctgtga
     3901 caagctttac atggagtgga ataattattg tccgaagcca cctttgcaat tgctagtact
     3961 aacgcaaagg aggatatgaa aatgcaatac aaaataatta atggtgccgt ttactatgat
     4021 ggtaatatgg tgttggaaaa catcggtatt gaaatcaatg ataatgaaaa gattgctatt
     4081 gttggtagaa atggatgtgg aaaaacaacc ttgctaaaag ctattatagg cgaaattgaa
     4141 ttagaagaag gaactggtga aagtgagttt caagtaataa agaccggtaa cccttatatt
     4201 agctatttaa gacagatgcc ttttgaagat gaaagtatat caatggtgga tgaagtccgt
     4261 acggtattta agacgcttat tgatatggaa aacaagatga aacagctgat agataaaatg
     4321 gagaatcaat atgatgataa aatcatcaat gaatactctg atatcagtga aaggtatatg
     4381 gctcttggag gtctaaccta ccaaaaagaa tatgaaacga tgattcgtag tatgggtttt
     4441 actgaagcag atgataaaaa acccatttct gaattttcag gtggtcagcg aactaagata
     4501 gcttttataa aaatactttt aacaaagcca gacattctat tacttgatga acctactaac
     4561 caccttgata tagaaacaat acaatggttg gagagttatt tgagaagtta taaatctaca
     4621 ttggttatta tttcccatga tagaatgttt cttaatcgaa ttgtggataa ggtttatgaa
     4681 atcgaatggg gagagaccaa atgttataaa ggtaattatt cagcctttga ggagcaaaaa
     4741 cgagaaaatc atatcaaaca gcaaaaagat tacgatttgc aacagataga aattgaaagg
     4801 attacacgct tgattgaacg ttttcgttat aaacctacga aagctaaaat ggtgcaatct
     4861 aaaattaaat tattacagcg tatgcaaata ttaaatgcac cagaccaata cgatacaaaa
     4921 acttatatgt ctaaatttca accgagaatc agtagttcaa ggcaagtatt aagtgcttca
     4981 gaacttgtga taggctatga tactcctctt gcaaaggtta atttcaacct tgaaagggga
     5041 cagaagcttg gaattgttgg gagtaatggt attggtaaat ccacgttgct taaaacactt
     5101 atgggtggtg tggcagcatt gtctggagat tttaaattcg gatacaatgt tgaaattagc
     5161 tattttgacc aacagcttgc tcaaatcagt ggagatgata cactattcga aatttttcaa
     5221 agcgaatacc ctgagctaaa tgacacagag gtcagaactg ctcttggctc atttcagttt
     5281 agtggagatg atgtttttag accggtgtcc tctttgtcag gtggagaaaa ggttagattg
     5341 acattatgta aattattata taaacgtcct aatgttttaa tcttagatga accgacaaac
     5401 cacatggata ttattggaaa agagaattta gagaatatct tatgcagtta tcaaggtaca
     5461 attatttttg tgtcacatga tagatatttt actaataaga ttgctgacag attacttgtt
     5521 tttgataagg atggtgtaga gtttgtacaa tctacttatg gtgagtacga gaaaaaaagg
     5581 atgaattctg aaaagccatt taataacatt aaagttgagc agaaagtaga gaaaaataac
     5641 acagtaaaag gcgatcgtaa ctccattgag aaggagaagg ttaagaagga gaaacgaatt
     5701 gaaaagcttg aagtgttaat aaatcaatat gatgaagaat tagaaagatt gaataaaatc
     5761 atttctgaac caaacaattc ttctgattat atggtactga cggaaataca aaaatcaatt
     5821 gatgatgtta aaaggtgtca gggtaattat tttaatgaat gggaacagtt gatgagagaa
     5881 ttggaagtta tgtaattttt gagttatgca ataaggatgt aaaagtgtta atgatacatt
     5941 ctggttgttg aaaatgtaaa aaaattaatg aatttttatt agatataatc gctatgtgaa
     6001 gaccttttga gtttgccgca tagcggtttt tattatctat actttggaat tgtcaagaaa
     6061 agtgtagtcg tataaactca ctaaatttcc tttgattgtt atgctgccag aagttgttct
     6121 tccagtagcc ctctgtatat aacaggagga ttgagcaggt ggtttctgtc gttgcagaac
     6181 cagattctaa atatgggact gaagtatttg atgaatatgt cataagtaaa gaatttgaaa
     6241 atgttcaaga ggttatgacg tctcaaatac agcagaaagg aaggttaaga taagagaaac
     6301 tgaagttcaa caatagtatt tagatatagg gtgataaatc agattatatt gtgatttgta
     6361 gaattgcttg ccttggtgct aaataggtat ggtaataatg tactaatcga ttgttttgta
     6421 gtaaaaaagc aacagataat taggatattt ttcttgtatt gttcgttaaa aagagccaaa
     6481 cgaagtatat tttctcatag aagttgaaca tagtagactg attattgcca ctgtaaaaaa
     6541 tgaggaatgt atcctgtgtt acagttattc cattaatgag agatgaggat aaagatagat
     6601 ttgtacaggg aattgagaaa tttaacgttt aaacaaaatc tagttcatcc tttacactat
     6661 ccgttgggat agtatacgtc acaaatgtgc gtacttacat tttgaatttt cttaagtata
     6721 atactcatta tgatgacacc tagataacaa ttcaaacccg atgcaagtgt aactgcatca
     6781 aaaatcaatt ttgaatccta attagttaaa gagaggtagc agaaatgaca attttgtatt
     6841 ttaccgcaac aggaaacagt ctttatgttg cgaaaagact tggtggaaaa ctaatatcca
     6901 tcccacaaat gataaaagag aataaatatg agttctcaga cgagaggata ggtattgtat
     6961 tcccggtttt tcacgttaat atcccgccat atattagaga ttttttagaa cgctctattt
     7021 ttaattgcaa atatctattt gttattgcaa catatggaga atatgcaggt tcaactgcag
     7081 atgaagtgaa aaagatttta gacaaacgtt caataccagc caattatata aataatatac
     7141 aaatgctcga taattttatt cctgcttttg atatgaacga acaaagagaa cgagatgcta
     7201 ttaaaaatat cgaaggtcaa attgatgtcg ttcaagaaca atcaatacag agtctacatt
     7261 cggtttaggg tgaaaatatg ctcgtggcac ttttttgaga actcttatgt ccaattccac
     7321 catcaatagc aaacctaaag ctcgtttcgt attttgtaat ctttttgcaa aaccattctc
     7381 cacaataagg taactatatt tcgaattgct ttcaaaagca atttttttga caatatcagt
     7441 actgatgtta aaggggatat taccaaatat tttatagtct ttgtttttgg ggaagttaaa
     7501 tttcagggtt ctgttgcaaa gttttaaata aagaataaaa tcccttacgg tatctat
//
LOCUS       DASFQS010000097         7507 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.101, whole genome shotgun sequence.
ACCESSION   DASFQS010000097 DASFQS010000000
VERSION     DASFQS010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7507
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.101"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(52..882)
                     /locus_tag="U1041_001856"
     CDS             complement(52..882)
                     /locus_tag="U1041_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4768945.1"
                     /translation="MKKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIG
                     FDKTFVPMGFEQTDGSYTGFDIDLANAVFEKYGITVKWQPIDWDLKETELNNGNIDLI
                     WNGYSITDERKEKVLFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVF
                     ESQPAILKDIVQNKDASQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYN
                     IIDAGFENEAFAVGARKSDTTLVENINKAFAELYKEGKFQEISQKWFGEDVATDAVKN
                     "
     gene            complement(909..1541)
                     /locus_tag="U1041_001857"
     CDS             complement(909..1541)
                     /locus_tag="U1041_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4768946.1"
                     /translation="MLELRNLSKRFEDKQIFSNYDLVIPEGKIVAIVGQSGGGKTTLL
                     RMLAGLETIDSGTLMYNGQELPLEELGKRHLLGFVFQDFQLFPHLSVLENLVLSPMKT
                     QNMSRSEVEDKALKLLDTLGLANHATAYPFSLSGGQKQRVALARAMMIDPEIIGYDEP
                     TSALDPELRKEVEKLILENRATGITQIVVTHDMQFAENIADEIIKIEPKH"
     gene            complement(1551..2192)
                     /locus_tag="U1041_001858"
     CDS             complement(1551..2192)
                     /locus_tag="U1041_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004228788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4768947.1"
                     /translation="MDYVLEVLPSLLNGAAVSLQVFFLVLILSLPLGAVFAFLMQIKF
                     KPLQWLLHFYVLIMRGTPLLLQLIFVYYVLPSVGITFDRMPAVILAFTLNYAAYFSEI
                     FRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSLVY
                     ALGVSDLLLASRTAANRDASLAPMFIAGAIYLLMIGAVTLISKQVEKKFDYYR"
     gene            complement(2346..4157)
                     /gene="glmS"
                     /locus_tag="U1041_001859"
     CDS             complement(2346..4157)
                     /gene="glmS"
                     /locus_tag="U1041_001859"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014621492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEM4768948.1"
                     /translation="MCGIVGVVGNTNATDILIQGLEKLEYRGYDSAGIFVTGGEQAHL
                     VKAVGRIAELSAKVGDKTEGTTGIGHTRWATHGKPTENNAHPHTSQTAGHILVHNGVI
                     ENYAEIKEEYLAGHDLKGQTDTEIAVHLIGQFAEEGLSTLEAFKKALKIIQGSYAFAL
                     IDATDADTIYVAKNKSPLLIGLGDGYNMVCSDAMAMIRETSEYMEIHDKELVIVKKDS
                     VEVMDYDGNAIERGSYTAELDLSDIGKGTYPYYMLKEIDEQPTVMRKLISAYTNEAGQ
                     VTVDADIIKAVQEADRIYILAAGTSYHAGFAAKAFLEKLTDTPVELGISSEWGYNMPL
                     LSKKPLFVMISQSGETADSRQVLVKANEMGIPSLTVTNVPGSTLSREATYTMLLHAGP
                     EIAVASTKAYTAQIATLAILAKAVGDANGNAYAKEFDLVHELSIVAQSIEASLSEKDV
                     IAEKVEKLLSTTRNAFYIGRGSDYYVSMEASLKLKEISYIQCEGFAAGELKHGTISLI
                     EDGVPVLALISNHPHLASHTRGNIQEVVARGANVLTIVDEAVAKEEDDITVTTVHPFL
                     SAIAMVVPTQLIAYYATLQRGLDVDKPRNLAKSVTVE"
     gene            complement(4347..4889)
                     /gene="lepB"
                     /locus_tag="U1041_001860"
     CDS             complement(4347..4889)
                     /gene="lepB"
                     /locus_tag="U1041_001860"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEM4768949.1"
                     /translation="MVKRDLIKQISLLVLLILGIIGLRFWLLEPVTITPEMANSYLKE
                     NDFIMTVRNVRPIHGDFILYNHEGKEYVSRVIALENETVTYMDDVLYRNDIIVTENYL
                     KTPHSQESYTDDFTLETLTSGKYNVIPEGHYLVLNDVRTNQQDSRSFGLISSEAIVGR
                     LTFRISPLSEFGFIKTGLVQ"
     gene            complement(4932..5549)
                     /locus_tag="U1041_001861"
     CDS             complement(4932..5549)
                     /locus_tag="U1041_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HEM4768950.1"
                     /translation="MSDIMYPEVLTVGSGAVKVATVGDSLTYGYGLENREKDAYPCIL
                     AEKLGHHYQVSNYGLSGRSLQSTADFPYFKEKNAQLSLESEADIVIIMIGSNDSRGPY
                     WNRERFIREYREMAEQYMDLPSQPDVYLVIPPYVPTSRFGLNNQIIEDELQKIIPAIG
                     NELGLPIINLYTVTEGHLEYYSDGLHLTPLGNQVIAEEIYQHLRH"
     gene            5634..6752
                     /locus_tag="U1041_001862"
     CDS             5634..6752
                     /locus_tag="U1041_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEM4768951.1"
                     /translation="MKKQVIIIGGGIVGSTAAFYLSQEEQVNLTLIDSGVGTATRAAA
                     GIICPWMAQKKNKDWYKLTSDGAVFYRQLVADLEKSGATEIPFKQTGTIGLKSKPELL
                     DKIQKIAEERRVDTPTIGEITPLIGSEINQYLPLLKPDYFGIHLEGGGRIDGGRLIDI
                     LQEQFLKNGGTRIYGQAKLLDNHTVEVDNQVLTADHIILATGAWLPHILEPLGYQVDV
                     RPQKGQLFELDTEFDTDNWPVCMPYGEIDILPFENGKIIIGATHEDDMGYDLELDPKK
                     IQAMHDKIAEFMPDLANYPVARTRIGTRAYTSTYSPFYGNIEDMPNVWVASGLGSTGL
                     TNGPIIGWQIAQEILGKENSFDRTAYSPTNYIKKQINS"
     gene            complement(6782..>7507)
                     /locus_tag="U1041_001863"
     CDS             complement(6782..>7507)
                     /locus_tag="U1041_001863"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768952.1"
                     /translation="HELPVGHLSHGSSVSHELPVGHLSLHGSSVSHELPVGHLSLHGF
                     SVSHELPVGHLSLHGSSVPHELPVGALSSSEDLVADKLEHVTVENTEIDDTGREIVNQ
                     IISLSNEYSGKISIRPTLNMRKNGYKNTNFSSELIEEQETVGQASSIGLPRTFNQSSE
                     PDFQVEKDSEKEQVTPSTSISSNNQDLGKGSEKAVAKGDEKDSQEKETADQTPYLIAF
                     SLLGIGTVSYWLLFHKMIKVNKS"
BASE COUNT         2294 a         1635 c         1329 g         2249 t
ORIGIN      
        1 cttaaatttg gtttttaaga aaaagagcac atggctcttt ttcttacatt attagttttt
       61 tactgcatcg gttgcaacat cctcaccaaa ccatttttgg gagatttctt ggaatttacc
      121 ttctttatat aattcagcaa acgccttatt aatgttttct acgagtgtcg tatctgattt
      181 acgagcaccg actgcgaagg cttcattttc aaaacctgca tcaatgatgt tgtaatctgc
      241 gataattccc tcttgttgca agtaataatt tgcatacacg cggtcaatca aaaggccatc
      301 aatacgatcg tttttcaagt caatcaaggc ttcattgaaa gtcgcatact gacttgcatc
      361 cttattttga acaatatctt tcaaaatagc tggttgtgat tcaaatactg aatagccaga
      421 tgaacctgct tgcgcaccta aaatcttatc cttcatatca gatacttggc taatattgga
      481 agattttttg gttacaagaa cttgttggtt atccatgtag ggatttgtga aaagaacttt
      541 ttccttacgc tcatctgtaa tagaataacc attccaaatt aaatcaatat tcccgttatt
      601 caattcagtt tctttcaaat cccagtcaat tggttgccat tttacagtaa ttccatattt
      661 ttcaaagact gcattagcca agtcaatatc aaaacctgtg taagaaccat ctgtctgttc
      721 aaatcccatt ggaacaaagg tcttatcaaa gccaatcgta acggattttt cagactcgta
      781 ggctgtccaa ttatcagact tagtagccga atcattggag ccacaagcag caagagttaa
      841 agaagttaca agagcaagag ctccaagcat cattttttta atattcatca tcatatttgt
      901 tccttttctt agtgtttcgg ttcaattttg atgatttcat ctgcgatatt ctcagcaaac
      961 tgcatatcat gggtgaccac aatttgcgtg attccagtag ccctattttc aagaatcagt
     1021 ttttcaactt cttttcttaa ttcagggtct agggccgaag ttggttcatc atagccgata
     1081 atctcaggat caatcatcat cgcacgcgcc aaggccacac gttgtttctg tccacccgat
     1141 aatgaaaatg ggtaggcagt tgcgtggtta gcaagtccaa gagtatccaa gagtttaagg
     1201 gccttgtctt ccacctctga acgcgacata ttttgcgttt tcataggaga gagaaccaag
     1261 ttttccaata cggataggtg cgggaaaagc tggaagtcct ggaagacaaa gcccagcaaa
     1321 tgtcgttttc ccaactcctc taatggcagt tcttgaccgt tatacatcaa agttcctgaa
     1381 tcaatagtct ctaaaccagc caacatccgt aaaagagttg tcttaccacc gccagattga
     1441 ccaacgatgg caacaatttt cccttctgga atgaccaaat catagttgga gaaaatctgt
     1501 ttatcttcaa agcgttttga caaattgcgt aactctaaca tgacttcctc ctatctataa
     1561 taatcaaatt tcttttctac ttgtttagaa atcagtgtta ccgcaccgat catcaatagg
     1621 tagattgcac ctgcgataaa cataggtgcc aagctggcat cacgattggc agcagtacga
     1681 ctagccaaca acaaatcact aaccccaagt gcatagacca aagaagtatc ctttaccaaa
     1741 gtcatgactt cattgaaaac acttggcaga acaattttca caacctgcgg taagacaatg
     1801 tagcgaatgg tctgaacagg ggtaaatttc aataccttag cagcttcata ctgacctttt
     1861 ggaatagctt caataccacc acgaaaaatt tcagagaaat aggccgcata gttgagcgta
     1921 aaggccagaa tcacagcagg cattcggtca aatgtaatac ccacacttgg taagacgtaa
     1981 taaacaaaaa ttaattgtaa aagcaagggg gttcctcgca taattaatac atagaaatgc
     2041 agtaaccatt gtaagggttt aaatttaatc tgcattaaaa aagcgaaaac agctcctaac
     2101 ggcaaggata atatcaatac tagaaaaaat acttgcaagg agactgctgc accatttagt
     2161 agactgggca gaacttccaa aacataatcc atagaattct cctaaaagag tgattaggtt
     2221 atagtatatc agaaaatatc ttgtatttca aagaattttt cagaattttt aataaattta
     2281 acaaaatttt gtatattttt tcaacagtga aaaaagaagg ctggaaatcc acgccttcct
     2341 tcttcttatt caacagtaac agacttagcc aagttacgtg gtttatcaac atccaaaccg
     2401 cgttgcaatg tcgcatagta agcgatcaac tgtgtcggaa ccaccatagc aatcgctgac
     2461 aagaatgggt gaactgttgt aacagtaatg tcatcttctt ccttagctac tgcttcatct
     2521 acaattgtca agacattggc accacgcgcc acaacttcct gaatatttcc gcgagtatga
     2581 ctagctaggt gcggatgatt tgaaattaag gccaagactg gtacaccgtc ttcaatcaat
     2641 gaaatggtac cgtgtttcaa ttcacctgcc gcaaagcctt cacattggat gtatgaaatt
     2701 tctttcaatt tcaagctggc ttccatagaa acgtagtagt cactaccacg accgatatag
     2761 aaagcgttgc gagtggttga taagagtttt tcaacttttt cagcaatcac atctttttct
     2821 gacaagctgg cctcgataga ttgagctacg atggacaatt catgcaccaa gtcaaattct
     2881 ttcgcgtagg cattgccatt ggcatcaccg acagccttag ccaagattgc caaagtcgca
     2941 atctgtgcag tgtaagcttt tgtagaagct accgcaattt ctggtcccgc atggagcaac
     3001 atggtgtaag ttgcctcacg tgatagggtc gaaccaggaa cgttggttac agtcaaactt
     3061 ggaatgccca tttcattagc tttaaccaat acctgacggc tatcagcagt ttcacctgac
     3121 tggctaatca tgacaaagag tggctttttg ctcaaaagtg gcatattgta gccccactca
     3181 gatgaaattc ccaactctac tggtgtatct gtcaattttt ccaagaaggc ttttgcggca
     3241 aatcctgcgt gataggaagt tccagcagcc aagatataga tacggtcagc ttcttgaact
     3301 gccttaatga tatccgcgtc aactgttacc tgaccagctt catttgtata ggcgctaatc
     3361 aatttacgca taacagttgg ctgctcatca atttccttga gcatgtagta tggataagtt
     3421 cccttaccaa tatctgacaa atcaagctca gctgtatagc taccacgttc aatcgcattg
     3481 ccatcatagt ccatgacttc aacactatct tttttcacga taactaattc cttatcgtga
     3541 atttccatgt attcacttgt ctcacgaatc atagccatag catctgagca gaccatgtta
     3601 tagccatcac caagaccaat caaaagtgga gatttatttt tggcaacgta gattgtatct
     3661 gcatccgtag catcaatcaa agcaaaggca tatgaacctt gaataatctt caatgctttt
     3721 ttaaaggctt ctagagttga caaaccttct tctgcaaatt gaccaatcaa gtgtacagca
     3781 atttctgtat ctgtctgccc tttcaagtca tgacctgcaa gatactcttc cttgatttct
     3841 gcgtagtttt caatcacacc gttgtgaact aggatatgtc cagcagtttg agaagtgtga
     3901 gggtgagcgt tgttctcagt tggcttacca tgagtcgccc aacgagtatg accgatccct
     3961 gttgtccctt cagtcttatc gccaactttt gcagacaatt ctgcaatgcg accaacagct
     4021 ttcacaagat gagcttgctc accacccgtc acaaaaatac ctgctgaatc ataaccacgg
     4081 tattctaatt tttcaagacc ttgaatcaaa atatcagttg cgtttgtatt tcctacaaca
     4141 ccaacgattc cacacataca tatcacctac gatgtttgtt aacatcggct ttcatttctt
     4201 taaaaattgg tctagtctaa tttatatcta aaaagaccag taaaatcagt atataacaag
     4261 tttttatcct tgtcaacatt ttaattggtc tagtctaatt tcaacataca gttccagtca
     4321 tctcaataca ataaaaaaag ctgattctac tgaaccagcc ctgtcttaat aaaaccaaat
     4381 tctgaaagtg gactaatccg aaaagtcagt ctaccaacaa tagcctcact agaaatcaaa
     4441 ccaaaactac gactatcctg ttgattcgtt cgtacatcat tcaacaccaa atagtgcccc
     4501 tctggaatga cgttgtactt tccacttgtc aaggtttcca atgtaaagtc atctgtataa
     4561 ctttcttgtg aatgaggcgt ttttaaatag ttctctgtaa caataatatc attacgatag
     4621 agaacatcgt ccatataggt aaccgtctcg ttttccaatg caatcacacg actcacatac
     4681 tcttttccct catggttata caaaataaaa tctccatgaa tcgggcggac atttcgcact
     4741 gtcatgataa agtcgttttc cttcaaataa ctatttgcca tctcaggggt aatcgtgact
     4801 ggctcaagta accaaaatcg taggccaatg attcccaaaa tcaataagac caataaactg
     4861 atttgtttta ttaaatctct ttttaccata atctctccat ttcactagta ttataccaca
     4921 atttagagcc attagtgtct gagatgctgg taaatctctt cagcaataac ttgatttcct
     4981 agcggtgtca aatgaagacc atcgctatag tattcaagat gtccctccgt cacagtgtaa
     5041 aggttaataa ttggtaaacc aagttcgttt ccaatagctg ggataatttt ttgtaattca
     5101 tcttcaataa tttgattatt caatccaaaa cgactggttg gtacgtaagg cgggatgact
     5161 aaataaacat ccggttggct tggtaaatcc atatactgct ctgccatttc cctatactct
     5221 cgaataaacc tctccctatt ccaatatggt cctcggctat cgttactacc aatcatgatg
     5281 atgacaatat ctgcttcact ctcaagtgaa agttgggcat tcttctcttt aaagtaagga
     5341 aaatctgcag ttgactgaag tgaacgccca ctcaatccat aatttgaaac ttgatagtga
     5401 tgcccaagtt tctcagctag aatacaagga taggcatctt tttctcgatt ctccaagcca
     5461 tatccataag tcaaactatc tccgactgtt gcaactttta cggccccact tccaacggtt
     5521 aggacctcag gatacattat atctgacaca cgaactcctc aatttttctt attttctatt
     5581 gtatcatgtt gaaaaaaata aataaacttc tgaatttgtg atataattaa cttatgaaaa
     5641 aacaagttat tattataggc ggaggaattg ttggctctac tgcagccttt tatctctccc
     5701 aagaagaaca agtcaatctt actctcattg attcaggtgt cggaacagcc acacgagctg
     5761 ccgcaggtat catctgccca tggatggctc agaaaaaaaa taaagactgg tataagctga
     5821 cttccgatgg tgctgttttc taccgtcaat tggtagccga tttggaaaaa tcgggtgcta
     5881 ctgaaattcc attcaaacag actggaacca tcggcctaaa aagtaaacct gaactacttg
     5941 ataaaatcca aaaaattgcc gaggaacgtc gcgtagatac tccgactatt ggcgaaatta
     6001 ctccgcttat aggctcggaa attaaccagt acctgccact acttaaacca gactattttg
     6061 gtatccattt agaaggtggt ggtcgtattg atggtgggcg tttgattgat attcttcagg
     6121 aacaattttt gaaaaatggt ggtacacgta tctacggaca agcaaaactg ctcgacaacc
     6181 atactgtcga agtagataat caggtgctta ctgctgacca tattatctta gccacagggg
     6241 cctggttgcc acatattctt gaacctcttg gttatcaagt ggatgttcga ccacaaaaag
     6301 gacaattgtt cgaattagat acagaattcg ataccgacaa ttggccagtt tgtatgcctt
     6361 acggagagat tgacatccta ccatttgaaa atgggaaaat cattattggt gcaactcatg
     6421 aagatgatat gggctacgat ttagaactag accctaaaaa aatccaagcc atgcatgata
     6481 aaatagccga attcatgcct gatttggcaa attatcctgt agccagaact cgcattggaa
     6541 cgcgagccta tacgtcaact tattcaccat tctacggaaa tattgaggat atgcctaatg
     6601 tctgggtagc tagtggtcta ggctccaccg gtctgacaaa cggtccaatt atcggttggc
     6661 aaatcgctca ggaaatctta ggaaaggaaa acagcttcga tcgaactgct tattctccta
     6721 ctaactacat taaaaaacaa ataaatagct aaaaggccac tcgctctgag tagccttttt
     6781 tctatgactt attaacttta atcatcttgt gaaaaagtaa ccaataactc actgtcccaa
     6841 tacctagcag agaaaaagct attaaatagg gagtttggtc agccgtttct ttttcttgac
     6901 tatccttctc atccccctta gctactgctt tttcactccc tttgcccaga tcttgattat
     6961 ttgaactgat acttgtggaa ggagtgactt gttccttctc cgaatccttt tcaacctgaa
     7021 aatccggttc tgatgactga ttgaatgtcc ttggtaaacc tatactacta gcctgaccaa
     7081 ctgtctcttg ctcctcaatt agttcactag aaaagttggt atttttatat ccattcttac
     7141 gcatatttag tgtaggtcta attgaaattt ttcctgaata ctcattagac aaggaaataa
     7201 tctggttaac aatttctctt ccagtatcgt ctatttccgt gttttcaaca gtcacatgtt
     7261 ctaacttgtc ggccaccaaa tcctcagaac ttgacaaagc tcccacaggc aattcatgcg
     7321 ggacagaaga accatgaagg gacaaatgtc ctactggtaa ctcatggcta accgaaaaac
     7381 catgaagaga taggtgacca actggtaatt catggctgac cgaggaacca tgaagagaca
     7441 agtgaccaac tggtaattca tggctgacag aagaaccgtg agacaagtga ccgacgggca
     7501 actcatg
//
LOCUS       DASFQS010000098         7385 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.102, whole genome shotgun sequence.
ACCESSION   DASFQS010000098 DASFQS010000000
VERSION     DASFQS010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7385
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.102"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            107..334
                     /locus_tag="U1041_001864"
     CDS             107..334
                     /locus_tag="U1041_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4768953.1"
                     /translation="MQIKLYELRKKKNLTQKQMAKQLQISENAYRNKELGHSAFKSDE
                     MFIIADILEESIGEIFTPTNPRNVVCKNNQH"
     gene            346..1071
                     /locus_tag="U1041_001865"
     CDS             346..1071
                     /locus_tag="U1041_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014334618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HEM4768954.1"
                     /translation="MHEIYNFHGQEVRTLTIDNEPYFVGKDVAEILAYKEPNKAITRH
                     VDEEDRTKHPIPTKGGTQDSYIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKH
                     GMFATDELLDNPDFAIATLQKLKEEREERKRLEVVNSQLAVENQIMQPKAQYFDDLVD
                     RNLLTNFRDTAKMLKVKQKEFIDFLLSKKYIFRDKKGKLMPYQQYNNSLFEIKESKGV
                     DWEGVQTLITPRGRETFNILLNS"
     gene            1083..1244
                     /locus_tag="U1041_001866"
     CDS             1083..1244
                     /locus_tag="U1041_001866"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768955.1"
                     /translation="MQENNTEKAVDVRKEVVKYLHDVLMNADTKDPAAIQAVAELIIA
                     TGQAVSGIF"
     gene            complement(1248..1445)
                     /locus_tag="U1041_001867"
     CDS             complement(1248..1445)
                     /locus_tag="U1041_001867"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768956.1"
                     /translation="MKSFIMYILKSKEKITLHFSNGKSITISELADQQYDDDTLLLTS
                     ENQLINLNQVCYIDKSSPWLY"
     gene            1515..1688
                     /locus_tag="U1041_001868"
     CDS             1515..1688
                     /locus_tag="U1041_001868"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768957.1"
                     /translation="MRPKRYPYSGKLKASTMDIVKAWEKAYSAYRVKGQKRQEKAEQE
                     LEKATQRLYQLYH"
     gene            complement(1657..1860)
                     /locus_tag="U1041_001869"
     CDS             complement(1657..1860)
                     /locus_tag="U1041_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768958.1"
                     /translation="MNDFDSLKQASYTLIAELIEKNSADVATATVIDVIEKLLAAKDM
                     QVDQLATEKATKTLNDIADKASE"
     gene            2073..2264
                     /locus_tag="U1041_001870"
     CDS             2073..2264
                     /locus_tag="U1041_001870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768959.1"
                     /translation="MSEMEQKINKILNVPMEQQVVRECMLWLLLKHADIDSEIEVERA
                     EINSSSGTNKLIFTITICE"
     gene            2483..2752
                     /locus_tag="U1041_001871"
     CDS             2483..2752
                     /locus_tag="U1041_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768960.1"
                     /translation="MFDAIASVSVFVLPMLAAGIVEQRKAEKERRRKQLALYREMELE
                     TLKYETWAQAEKYYKTCQKEAVKNNLKRNPQQVDKENGRYARMVG"
     gene            2733..2933
                     /locus_tag="U1041_001872"
     CDS             2733..2933
                     /locus_tag="U1041_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768961.1"
                     /translation="MQEWLVNFFKQEKPVIPRPLYTLEQENQLLHDMVRDIAEQRNEY
                     RIENQRLRDENAMLKRELESAT"
     gene            3108..3467
                     /locus_tag="U1041_001873"
     CDS             3108..3467
                     /locus_tag="U1041_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4768962.1"
                     /translation="MQHLVRNIHKNYTQLSNHSAQNSELSLQAKGLLFVLMSNKDTWK
                     PYIDELSKRSKNGRDAHRAAYDELKEAGYIRVYNKSLGRGKGMRREPLVMDVPITDSY
                     FEYWKSQVDKELSTGEL"
     gene            3739..4242
                     /locus_tag="U1041_001874"
     CDS             3739..4242
                     /locus_tag="U1041_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018368342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768963.1"
                     /translation="MTKKYELVLDDTISFWGWKLFRIRALISFGSVEAGDLGGYIEKE
                     DNLSHDGNAWVWGNAKVSGNAEVWGNAEVRGNAEVSGNAEVSGDAEVSGNAEVRELGD
                     IIVFKNHWSSGRHFTYTKSNKMWKVGCFYGTGQELIKKAYRDSEKSGNYYKAYVDFVG
                     YLEKLGD"
     gene            4242..4448
                     /locus_tag="U1041_001875"
     CDS             4242..4448
                     /locus_tag="U1041_001875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768964.1"
                     /translation="MSKFKYTIRCKDCQRYSTATDEDGCELNCPKCLSERLVVIYEDV
                     MPEPEDEDRAYDEWKDNVAMGYEV"
     gene            4452..4634
                     /locus_tag="U1041_001876"
     CDS             4452..4634
                     /locus_tag="U1041_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001078548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768965.1"
                     /translation="MSYYREQHELSRELVRERLETCELLGEIINKQQDLILALKRENR
                     RLKRENWNLKQTKRRK"
     gene            4636..5454
                     /locus_tag="U1041_001877"
     CDS             4636..5454
                     /locus_tag="U1041_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019292867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HEM4768966.1"
                     /translation="MTTNQAVTHKNFFNAPNVQKSFDDVWKGVGVQFATSILSVIQGN
                     ASLKTASNESIMTSAMKAAVLNLPIEPSLGRAYLVPYKGQVQFQLGYKGLIELAQRSG
                     KYKSINAGPVYKSQLVSYDPLFEELVLDFTQAQDEVVGYFASFSLLNGFRKLTYWTKA
                     EVEAHGKKFSKTFGNGPWKTDFDAMARKTVLKHILSIYGPLSVEMQTGMQSDESEIDN
                     TPRDIKTAEPVDTDQQLLDDLMSVDTETGEILEEPTELKDNGELDLRYEDPNAR"
     gene            5432..6256
                     /locus_tag="U1041_001878"
     CDS             5432..6256
                     /locus_tag="U1041_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /protein_id="HEM4768967.1"
                     /translation="MKTLTQDNYYEDKDYMSVSRFKQYLECEAKALALDTGKWVEDRD
                     QKPLIFGNYVHSYFESAEAHQKFLEEHKSDLFSSRKPYGLLADYKLADKVIATLETDE
                     LFNNLYHGRKGDRVEKEMIVTGTIAGVPFKGKIDSINHTIGYMVDLKTMKTIKGEEWS
                     QDLKQKVPGALANVINYNYHAQLSVYRELLKQMTGRSYKPLIVAVSKENEPDKEILSL
                     DEEMFSEGLEFVSERASHVWNVATGKVGPIKCGKCNYCRSKKKLNRIVPIRELLEM"
     gene            6392..6727
                     /locus_tag="U1041_001879"
     CDS             6392..6727
                     /locus_tag="U1041_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768968.1"
                     /translation="MKKTAILKTPFTLETNKEKQSLKIVGYTHWKISAEFVKQEHQLS
                     LDENGDMFEPEYRLVLEAEFPDKLILDGAYTAKEISKDIKEIQTLFEFIEENKKNLFD
                     ELGFHGVIL"
     gene            6724..7185
                     /locus_tag="U1041_001880"
     CDS             6724..7185
                     /locus_tag="U1041_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014634361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HEM4768969.1"
                     /translation="MKLIISIEPKPQSRPRAGRRGKHATVYEDGKMVAWRKKCTEFVR
                     QNYDGPYFDGAIKVDMTFYMPAPKSISEPPKPRSKAKKVQEYDDFVNERIYVDKKPDL
                     DNLEKAVYDSISKAGCVWTDDNIIVEHTTRKLYSPRPRIEIEVEEKANGTI"
     gene            7172..>7385
                     /locus_tag="U1041_001881"
     CDS             7172..>7385
                     /locus_tag="U1041_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEM4768970.1"
                     /translation="MEQFDNITKPKHYQGKYGMEALDVVKNFIGNLAGERAYYWGNVI
                     KYLLRFQQKNGVEDLKKARQHLDWLIE"
BASE COUNT         2559 a         1237 c         1717 g         1872 t
ORIGIN      
        1 gattatatta taccatagta cagtgaagca taatagcatg tgagaaacta ttcgataaag
       61 tcgctcgtga aattgagtat agagcgctag aaagtgaggt gagagggtgc agataaaact
      121 atacgagttg cgaaaaaaga aaaatttaac tcaaaaacaa atggctaaac aattgcaaat
      181 atctgaaaac gcgtatcgta ataaagagct tgggcatagc gcttttaaat cagatgagat
      241 gtttataatc gccgatattc ttgaagaaag tattggcgaa atttttacgc caacaaaccc
      301 acgaaacgtg gtttgcaaaa ataatcaaca ctagaaagga atagtatgca cgaaatttat
      361 aactttcacg gacaggaagt ccgtacttta actattgaca acgagccata ctttgtaggt
      421 aaagatgtgg cagaaatttt ggcttacaaa gaacctaata aagctatcac tcggcacgtt
      481 gacgaagagg ataggacgaa acatcctatc ccaacaaaag gtggtactca agatagctat
      541 atcatcaacg aatcaggtct ttactcgctg attttatcca gcaagttacc acaggcaaaa
      601 gaattcaaac gctgggtcac aagcgaagtc ttacccgcta ttcgtaagca tggtatgttt
      661 gcgacagacg agctactgga taacccagac tttgcgattg caaccttgca gaaactcaaa
      721 gaagagcgag aagaacgcaa gcgattagag gttgtgaata gtcagcttgc agttgaaaat
      781 caaatcatgc agccgaaagc gcagtatttt gacgacttgg ttgaccgcaa cttacttact
      841 aatttccgtg acacagctaa aatgctaaag gttaagcaaa aagaattcat cgacttcttg
      901 ctatctaaga aatacatctt ccgcgataag aaaggtaagc tgatgccgta tcaacagtat
      961 aacaatagcc ttttcgaaat caaggagagt aagggcgtag attgggaagg tgtacaaacc
     1021 ttaatcactc ctagaggtcg tgagactttc aatattttat taaattcgta gaagggaaca
     1081 acatgcagga aaataataca gaaaaggcag tcgatgtgcg taaagaagta gtgaaatatc
     1141 tacacgatgt actaatgaac gccgatacaa aagaccctgc agctatccaa gcagttgcag
     1201 agttaatcat cgcgactggt caagcagtat ctggcatatt ttaagcgcta gtagagccaa
     1261 ggcgaagatt tatcaatata gcagacttga tttaagttga taagttgatt ctcgcttgtg
     1321 agtaataaag tatcatcgtc atactgttgg tctgctaact cggagatagt tatactctta
     1381 ccgttagaaa aatgtaaagt tattttttct ttggatttga gtatgtacat gataaatgat
     1441 ttcatagcat tcacctcctt tccgtattta ttatatcacg gaaagagagc aatcaaacta
     1501 ggaaggagaa ggagatgaga ccaaaacgtt atccatatag cggaaaatta aaagcctcaa
     1561 ctatggatat agtcaaggct tgggaaaaag cttattcagc atatcgtgtc aaaggtcaaa
     1621 aaaggcaaga aaaggctgaa caagaattag aaaaagctac tcagaggctt tatcagctat
     1681 atcattgagt gtctttgttg ctttttcagt tgcaagttga tcaacttgca tatctttagc
     1741 agctaacaac ttttcaatga catcaatgac tgtggcagtt gctacatcag ccgaattttt
     1801 ctcgattagt tcggcaatta gtgtataact ggcctgcttt agactgtcaa aatcattcat
     1861 attgttatct cctttccttg ttgatagcta aattatagca tggatagggg aggggaacaa
     1921 gattggaaag gaagagagaa catggaaagt aaattgattg ctaattggca aaagaaaaac
     1981 taccagctca gtcaactgat agttgatagt cttgaagggt tagacgtttg ggagactgtg
     2041 ctggcattag gaaagattag gagaggaatg ctgtgagtga aatggagcag aaaatcaata
     2101 aaattctaaa cgtacctatg gaacagcagg ttgtacgtga atgtatgctg tggcttttgc
     2161 tgaaacacgc tgatattgat tctgaaatcg aagtagagag ggcagaaatc aattctagtt
     2221 ctggtactaa taaattgata ttcacaataa ctatatgcga gtaaaacaaa aagaccactg
     2281 cgggaacagt ggcttaaaaa tacatacaaa ggaattatac cacaatgcaa gaaaaaaata
     2341 aattggttgt acgctgtttt ttaaaagacg gcacagaagt cgacccgaca gaagtcgtga
     2401 taccaaaaga tcatccggtg tatcggacga tacagatgat tttggatgaa cggatcagaa
     2461 aggaaatggc atgacagaaa ctatatttga cgcaattgca agtgtatcag tgtttgttct
     2521 gccgatgttg gcagcaggta ttgtggaaca gcggaaggct gagaaggagc ggagacgcaa
     2581 acaactggcc ttgtatcgtg agatggaatt agaaacactc aagtatgaaa cgtgggcaca
     2641 ggctgaaaag tattataaga cttgccaaaa agaagctgtg aaaaacaact taaaacgcaa
     2701 tcctcaacaa gtagataagg agaatggcag atatgcaaga atggttggtt aattttttta
     2761 aacaagaaaa acctgttatt ccacgtccgc tttacacact ggagcaggaa aaccaactat
     2821 tgcatgacat ggtccgtgac atcgctgaac aacggaatga ataccgtatc gagaatcagc
     2881 ggttgaggga tgagaatgct atgttgaaac gtgagttgga gagcgcaaca tgacgaaaga
     2941 atcgaaaata gaactcttgc tgaaatcatt tgagaactat cggaagacaa gagacgttga
     3001 acatcttaat gacgtagaaa ggatcttgga atatgacgaa catgacagcg attgataaca
     3061 tgcttcaact tgcgattgtt ggagtttagg aggaatggtt atggcttatg caacaccttg
     3121 tcaggaatat ccataaaaac tatacgcagt tgagtaatca ttctgctcaa aacagcgaac
     3181 ttagtttaca agctaaaggg ttattatttg tgttgatgtc gaacaaagac acctggaaac
     3241 cttacatcga tgaactttct aaacgttcga agaatgggcg tgatgcgcat agggcagctt
     3301 atgacgaact aaaagaggct ggatatatcc gtgtgtacaa taaaagtctc ggtagaggga
     3361 aagggatgcg acgagagccg ttagttatgg atgtcccaat cacggatagc tattttgaat
     3421 actggaagag tcaagtagat aaagaattat ccacaggaga gttataagag tgatttttac
     3481 aacttactga ctttacgtag gttgaatagt tcgtaggttg aatagttcgt aggttgaata
     3541 gttcgtaggt tgaagaatcc gacactaata ataactaaat aaaaataata actaacttaa
     3601 taataatcta ggggctatcg cccactaata aacaataaga ggctaaagcc tctaactaac
     3661 ttaaaaacaa actaatcgtt atatataaat aatatatata gggatttcac aagagttatc
     3721 cacaggagga aaatcaaaat gacaaaaaaa tatgaacttg tcctagacga tacaatcagc
     3781 ttttggggtt ggaagttatt tcgtattcgt gccttgatta gctttggtag cgttgaggcg
     3841 ggggatttag gcggatatat cgaaaaagag gataatttaa gccatgatgg caatgcttgg
     3901 gtatggggca atgccaaagt atcgggcaat gccgaagtat ggggcaatgc cgaagtacgg
     3961 ggcaatgccg aagtatcggg caatgccgaa gtatcgggcg atgccgaagt atcgggcaat
     4021 gccgaagtac gggagctagg cgacattatt gtttttaaaa atcactggtc aagcggtcgt
     4081 cactttactt atacaaaatc caacaaaatg tggaaagtcg gctgtttcta tggcacaggt
     4141 caagaattga ttaaaaaagc atatcgtgat agtgagaaat caggcaatta ttataaggct
     4201 tacgttgatt ttgtaggata tctagagaag ttaggtgatt aatgagtaaa tttaaataca
     4261 caatccgctg taaggactgt caacgttaca gcacagcaac agacgaggat ggttgcgagt
     4321 taaactgtcc gaaatgcttg tccgagcgtc tggtcgttat ttacgaagat gtcatgcctg
     4381 aacctgaaga tgaggacaga gcttatgacg aatggaaaga caatgtagcg atgggatatg
     4441 aggtctagtt tatgagctat tatcgtgaac aacatgaatt gagcagagaa ctggtcagag
     4501 aacgactaga aacctgcgag ctattaggcg agattatcaa caaacaacag gacttgatac
     4561 ttgctttgaa acgagagaac agacgcctaa agcgtgaaaa ctggaacttg aaacagacga
     4621 aaaggagaaa ataaaatgac aacaaatcaa gcagtaacac acaaaaattt ctttaatgca
     4681 ccaaatgtgc aaaaatcatt tgatgatgtt tggaaaggtg taggggtgca gtttgcaaca
     4741 agtatcttat ctgtcattca agggaacgca tcacttaaaa ctgcatctaa cgaatcaatc
     4801 atgacatcag ctatgaaggc tgcggtacta aatttaccaa ttgaaccaag cttaggacgt
     4861 gcttacctag taccgtacaa aggacaagta caatttcagc taggctataa aggtttgatt
     4921 gagttggcgc aacgaagtgg caagtacaag agtatcaatg caggtccggt ttacaagagc
     4981 cagcttgtat cttatgaccc attgtttgaa gaattagttc tcgattttac tcaagcacag
     5041 gatgaggttg ttggatattt cgcaagtttc agtttattaa acggtttccg aaagctgacc
     5101 tactggacca aagcagaggt cgaagcgcac ggcaagaagt tttcaaaaac ttttggaaac
     5161 ggtccttgga aaactgactt tgacgcaatg gcacgcaaaa ctgtgttaaa acatatcttg
     5221 agcatctacg gccccttgtc agtagaaatg cagacaggta tgcagagcga tgaaagcgag
     5281 attgataaca caccacgaga catcaaaacg gccgagccag tcgatacaga ccaacaattg
     5341 cttgacgatt taatgtctgt agataccgaa acaggtgaaa ttctggaaga gccaactgag
     5401 ctaaaagata atggggagtt ggatttgaga tatgaagacc ctaacgcaag ataattatta
     5461 cgaggataaa gactacatgt cggtatctcg ctttaaacag tatctagagt gcgaggcaaa
     5521 agcattggct ctggatactg gaaagtgggt agaggataga gaccagaaac cgttgatttt
     5581 tggaaattac gtccacagct atttcgagag tgcagaagct catcagaaat ttttagaaga
     5641 gcataagtcg gatttgtttt ctagtcgcaa gccatacggc ttgctggctg attataaatt
     5701 ggcggacaag gttattgcaa cgctagaaac ggatgaactc tttaataatc tttaccacgg
     5761 tcgaaagggt gaccgagtag agaaagagat gattgtgact ggcacaattg ctggggttcc
     5821 gttcaagggt aaaatcgact ctatcaacca cactataggc tacatggttg atttgaagac
     5881 tatgaaaaca attaaaggtg aagagtggag tcaagacttg aaacaaaaag ttcctggtgc
     5941 attggcaaat gttattaatt acaactacca tgctcaattg tctgtttacc gagaattgct
     6001 gaagcaaatg acagggcgtt catataagcc cttaatcgtc gctgtgagca aggaaaacga
     6061 gccagataag gaaatattaa gccttgacga agaaatgttc tcagagggct tagaattcgt
     6121 ttctgagcgt gctagccatg tatggaatgt ggcaactgga aaagtcggac cgattaagtg
     6181 tggcaaatgc aattattgcc gtagcaagaa aaagctgaat cgcatagtgc cgattcgtga
     6241 attgttggag atgtaattta acaagccggg catccttgta aaactgcgcc ctagaccgtg
     6301 tcaattggaa acaatcagtt gacagttgga cgatagcgac tgcccgtatt tagccaaact
     6361 cacacaaagg cagtcgctgg attttggaaa aatgaaaaaa acagcaattt taaaaacacc
     6421 ttttacatta gagacgaaca aggaaaagca aagtctcaaa attgttggtt atactcactg
     6481 gaaaataagt gcagaatttg tgaagcaaga acaccaactt tcattggacg agaacggaga
     6541 tatgttcgaa ccggaatata gactcgtctt agaagctgaa tttcccgata aacttattct
     6601 cgatggtgct tatacagcaa aagagattag caaggacatt aaagaaatcc aaaccttgtt
     6661 tgagttcatc gaagaaaata aaaagaattt gtttgatgaa ttgggattcc acggggtcat
     6721 actatgaagt tgattatatc tatcgaaccc aaaccgcaga gccgtccaag agctggaaga
     6781 cgaggtaaac acgcaactgt ctatgaagac ggaaagatgg ttgcgtggcg gaaaaaatgc
     6841 actgagtttg ttagacagaa ttacgatggt ccatattttg atggggcaat caaggtagat
     6901 atgacattct acatgcctgc tccgaagtca atatcagaac cacctaaacc tcggtctaag
     6961 gctaagaagg tgcaggagta tgatgatttt gttaacgagc ggatttatgt agataaaaag
     7021 cctgacttgg ataatctgga gaaggctgta tatgacagta tcagcaaggc ggggtgtgtt
     7081 tggacagatg ataacatcat cgtcgagcat acaactagaa agttgtacag tcctagaccg
     7141 agaattgaaa ttgaagtgga ggagaaagca aatggaacaa tttgataata taaccaaacc
     7201 caaacactac caaggtaagt atggtatgga agcccttgat gtggttaaga actttatcgg
     7261 caatctagca ggcgaacgtg cctattactg gggaaatgtc atcaagtacc tgctaaggtt
     7321 tcagcaaaag aacggcgttg aggacttgaa gaaagctaga cagcatttag attggttgat
     7381 tgaga
//
LOCUS       DASFQS010000099         7212 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.103, whole genome shotgun sequence.
ACCESSION   DASFQS010000099 DASFQS010000000
VERSION     DASFQS010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7212
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.103"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..6860)
                     /locus_tag="U1041_001882"
     CDS             complement(<1..6860)
                     /locus_tag="U1041_001882"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012956.1,HMM:NF037639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HEM4768971.1"
                     /translation="MKSWKKVVSKCLLALLVVDSVATPVLALSETISEGVRIRDTYIE
                     DYKEDASKLSLTIDKEQTNTEQLVVKLKAEEGEINEQGLTLVLQSGLALQQNDQGQDI
                     LPEGFYRDEAYNENDRKVAAAGSDALAAGLEQLPVYGEGYYSLKIKPSADRPVTLNTD
                     PNDSSKRFEEHVFVFKKVAEVQTGEMVAVTNERYLTILKENQSVFANQETTELDASTE
                     MPRAPGSLTIQLRAYEENNPDPKVPLTESEFEISPVDHPEQTTKGKTDLNGNVTFENI
                     ALGTYTIKQLTSTSSYNLAEQIEAVELTESEPAKTVLVTNQPKESLARATRRSRSVSE
                     RAAVNTTLAPGVETYGITYANIDVFGYYQFQDGYNTYGAGMDVKWKLPAEAKEGDYFT
                     LKFGNQILLNRAPMYDDNETVPYDRLDSVEDRYTETHIGNLFFQIVTRGSATEPSGIP
                     ILNVYYTKAGELTFVVQKYANDKGPIEGDAIVGKLIDKTNLTAMTDGNGRHRSTRRIR
                     PNGTDTKLEWDVYDLDEQIQKYDFYEGFYPNFMLMTEQAGATAANGNPWFLGRSITYT
                     SQYMDTTPVTFQDANGDPNLSGVYVNQRTQLFERLYDFGTNHNQTTSFGREIIFPVYE
                     DRTYLYYYFVYNGNRNHSGSGAWEIYLRPEGAELEIVDVKLFQGYNGQYANNQPTSMV
                     PPMATVDPYNPEAGEQVSTGKRFTKYNATEWKADFGGSEQQNTYFAIVKAKKKTPSPE
                     PQDLNRLSYHMGMHARQTIFVLRPFIDYYVPTEGFGAGWSRSETPKDLLGDFKIKKTD
                     PNKEVVYPNYQKVNGAIQYQDDHGNTYTYNSATQKFVDANGQSLTQKTDAQGNLLFED
                     NLHTVFTQQKNGSTITYRDAKGVVYSKKDGEEDIYISADGKIFRPSRPLLKDYEVTIK
                     VENTVVTDANGEVYPLASQTNGILDVVDRYGNLLRLQKTTSGLNAWKYDSTRGGFVSA
                     QVTAQGNGYYKISALPISTTHIRPKLTETFSFRITDTVTGLSFNHEVDEYGYAIFPSL
                     LVGHTYRLEETSARVGYTRTPKVYLLTVTATGQITITDENGAPISATTDPLSVVDASN
                     LLYSVVNDVVRLKIKKTDEDGNLITSDKATFKVYKSGDYTKNGNTIQPNAGAVPVATI
                     QTSKVDGTNTLYGESEAVVIPNIMTNVNYGIVEETAPAGYRILTTGIEVKLVQSGSNY
                     VWQLVSGGNNASLESDNLTLKVKNRADLATLVITKKIKGLESLNNLITSSVTFKLTKL
                     NDTSFNPITLRQNANTRFVFNNLSKGVYRLEETEPPTGYVKSPTPYTVIVDKGQASLY
                     QSGQGTTTQATGLTVIKSNHFDNAQIWGLNTEDKALDGSDVTATLYKLANSRLEVGQW
                     WGVDLGAIKNVTHIRYLQGPVTGAGSDNDRMDSLELEYSIDGQNYQSLGTYNAPNGGK
                     LGEVDTDSDVMARYIRVRNLRLKTGVWLAIKGMTITTRNPITPLTDGTLAIGNIQNPK
                     IRIEKQDTNGQVISQNVTFKLYKVDDATTVDNVTNAIQENNLIQTFNLQNGSLTTAMD
                     VKVLGKYALVETQAPTGYTGLAAPVLLELYEASQPHNDQLNKAVTRFRVLSQTDKVTV
                     DDSTTATDNTLKMVVKNVRNTFNLKLLKRDLANPNTGLNARFELYDANETAVISQGNT
                     TQTGNSLTFQNLQPGIYVLKEVTPPSGYIQVNPVRLEITQAGQLQILSGDTELLEVAT
                     PTNNELQLIVKNDSKKTLRISKRIKGLESLASSITGEMTFTLSKDDDTTFQPISLTQV
                     ANQDFFFRDLAYGSYTLVETTPPTGYLVDSVTYKVTVTRSGVSLYKISNASSIETVTN
                     ATLIKSADLSNIQAGQDGNAIDGRDDTFVTYSNFNGQGDNIPVGAYIGVDLQAVKRVR
                     QIYYLQGNQNNPLDRLNRYTVEYSIDGQNYYPLVSNASGESLTQDTDILARYIRIRNE
                     ELVSQKWFAIRELRVSAQEAVSVNVQGMDVYPIGNIENPEFKIEKVDSNNTQISKPVI
                     FKLYKVDDSTTADTVSSVTLNDSNLVQTLTFTGQSSMTRLTATALGKYVLVEAQAPEG
                     YDGLTAPVLLELEETTRAYDVTQQKAVTRFRVLSQTNSVSVADLPGVSGVLANAISIK
                     VKNTQKSYNFKVIKKDLTTNAGLDARFELYRENGSRVDAGNTTSSGENLVFRNLNPGV
                     YVLKEVRTPSNYNGITDIKVQIAANGTLTVLEGPAELLTTSNADENREIRLTVKNVPF
                     LEMSVQKLKKATGVSLAGVRLKITALDQTPAPNFKAVTG"
BASE COUNT         1749 a         1577 c         1550 g         2336 t
ORIGIN      
        1 cctgtcacag ctttaaagtt tggagcaggt gtttgatcca gtgcagttat tttcaatcga
       61 acgcctgcca gactgacacc tgtcgctttt ttcagttttt gaacgctcat ctcaaggaat
      121 ggaacgtttt ttacagtcag gcggatttct cgattttcat ctgcattgct ggtcgtcaag
      181 agttctgctg gtccttcaag aacggttaga gttccattgg cagcaatctg taccttaata
      241 tccgtaattc cattgtaatt gcttggtgtt cgtacctctt tgaggacata aacaccagga
      301 ttgagattac ggaagacaag gttctcacca gacgacgtcg tatttccggc atcgacacga
      361 ctaccatttt cacgataaag ttcaaaacgg gcatccagtc cagcatttgt cgtcaagtct
      421 ttcttgatga ctttaaagtt atagcttttt tgcgtatttt ttactttaat gctaatagcg
      481 ttcgcaagaa caccactcac accaggtaaa tctgctacgc tgaccgaatt cgtttgactt
      541 aaaactctaa aacgtgtcac agctttttgt tgggtcacgt cataggctcg tgtggtttcc
      601 tccaattcca gcaagactgg ggcagtcaag ccatcatagc cttctggtgc ctgcgcttcc
      661 acaagaacat atttgcccag agctgtcgca gttaacctag tcatgctact ttgacctgta
      721 aaggtcaagg tttgcacaag attgctgtca ttaagagtaa cacttgatac agtatctgct
      781 gttgtactat cgtcaacttt gtagagctta aagatgacag gttttgagat ttgggtgtta
      841 ttgctatcaa ccttctcaat tttgaactct gggttttcga tgttaccgat tggatagaca
      901 tccatacctt gcacatttac agaaacagcc tcttgagccg atactctcaa ctctcgtatc
      961 gcaaaccatt tttgtgatac caattcttca tttcttatcc gaatatagcg agcaagaatg
     1021 tctgtatctt gcgtcagact ttctcccgac gcattgctca cgagtggata atagttctga
     1081 ccatcaatag agtactcaac tgtatagcga ttcaatctat ctaatggatt gttttgattt
     1141 ccttgcaaat agtaaatctg acggacacgt tttacggctt gtaaatcaac tcctatataa
     1201 gctcctactg ggatattatc cccctgacca ttaaagtttg agtaggtaac aaatgtatca
     1261 tcacgaccgt caatagcatt tccatcttgt ccagcttgaa tattggacaa atccgctgac
     1321 ttgatgagag tggcatttgt gaccgtttcg atcgacgaag cattggaaat cttgtacaag
     1381 gaaactcctg agcgagtcac tgtcacctta taagtaaccg aatcaaccag ataacctgtt
     1441 ggcggtgtgg tttcgacaag agtataggaa ccgtaggcca agtctctaaa gaaaaagtcc
     1501 tgattcgcca cttgcgtcag actaatcggt tggaaggttg tatcatcatc ttttgataag
     1561 gtgaacgtca tctcacctgt gatggaactt gctaggcttt ccaaaccttt gatccgctta
     1621 gaaattcgaa gtgtcttttt gctatcgttt ttgacaatca gctgcagttc attattggtt
     1681 ggagtagcga cttcaagaag ctccgtatct cctgacagga tttgtaattg acctgcctgc
     1741 gtgatttcaa gtcgaactgg atttacttgg atatagcctg atggcggtgt tacttctttc
     1801 aagacataga tacctggctg cagattttgg aaggtaaggc tatttcctgt ctgcgtggta
     1861 ttgccttgac taatcacggc tgtttcattt gcatcgtaga gttcgaaacg agcgttgagg
     1921 ccggtatttg gatttgcaag gtcgcgtttc aatagcttca aattgaaggt attccgcaca
     1981 tttttgacga ccattttcag ggtattgtcc gttgcggtgg tgctatcatc aaccgttacc
     2041 ttgtctgttt gactaagtac tctaaagcgt gtgacggcct tatttagctg gtcattatgt
     2101 ggttgactgg cttcataaag ttccaagaga actggggcag ctagccctgt ataacctgtc
     2161 ggagcctgcg tttccaccaa agcgtattta ccaagaacct taacgtccat tgctgtcgtg
     2221 agactaccat tttgcaggtt gaaggtttga attaaattat tctcttggat agcatttgtg
     2281 acgttatcaa ctgtcgttgc atcatccacc ttatagagtt taaaggtgac gttttgtgaa
     2341 atgacttgtc catttgtatc ctgtttttca atccgtattt ttggattttg aatatttccg
     2401 atagcaagtg tcccatctgt caacggagtg attggatttc ttgtagtgat ggtcatcccc
     2461 ttgatggcta accagacacc tgtcttgaga cgaaggttgc ggacacggat atagcgtgcc
     2521 atcacatcgc tatctgtgtc aacttcgcca agttttccac cattcggtgc attgtaggtg
     2581 cctaggcttt ggtagttttg accatcgata gaatattcta gttctagact atccattcta
     2641 tcattatcac taccagcacc ggttactggt ccttggaggt agcggatatg ggtgacattt
     2701 tttatcgctc ctaggtcaac tccccaccat tgaccaactt ctaatcggct attggcaagt
     2761 ttgtagagag tagcagttac atcacttcca tccaaggctt tatcttcggt attgagtccc
     2821 cagatttgcg cattgtcaaa gtggttagac ttgatgaccg ttagtcccgt agcctgagtc
     2881 gttgttcctt gaccagattg gtacaagcta gcttgacctt tgtccacgat aacggtatac
     2941 ggtgttgggg atttgacata tcctgtcggt ggttcggtct cttctaaacg atacacgcct
     3001 tttgataaat tgttaaacac aaatcttgta ttagcatttt gccttaaagt gattggatta
     3061 aagcttgtat cgtttaattt ggtcaacttg aacgtaacgg atgaagtaat caggttgttc
     3121 agactttcga gtcccttgat tttcttagtg atgacaagag tggctaaatc agctctgttt
     3181 ttcaccttga gggtaagatt atctgattct agactagcat tgtttccacc tgaaaccagt
     3241 tgccagacgt agttggaacc actttggact agcttcactt cgataccagt tgtcaggata
     3301 cgatagcctg ctggggcggt ctcttcgaca atgccgtagt tgacattggt cataatgttt
     3361 ggaatgacaa ccgcttctga ctcaccgtag agggtatttg tcccatccac tttcgaggtt
     3421 tgaatggtcg ctactggtac agctccagcg tttggctgaa tggtgttgcc atttttcgta
     3481 taatcgcctg atttatagac tttaaaggtg gctttatccg atgtgatgag attgccatct
     3541 tcatcagtct ttttgatttt gaggcggacg acatcattga caacggaata aagaagattg
     3601 cttgcatcta caactgataa cggatcagtc gttgcagaga ttggtgctcc attctcatcc
     3661 gtaatcgtaa tctgtcctgt agcagttact gtcaagaggt atacttttgg tgtacgggta
     3721 taccctactc gtgccgaggt ttcttcaaga cgataggtat gtcctaccag caaggatggg
     3781 aagatggcat aaccatactc gtcaacttcg tgattgaagg aaagtccggt tactgtgtcg
     3841 gtaatcctga aactaaaggt ctctgttagt tttggacgga tatgcgttgt cgaaattggc
     3901 agggctgaaa tcttataata accattgcct tgggcagtta cctgtgcgct gacaaatcca
     3961 cctctcgtcg agtcatattt ccaagcattt aagccactag ttgttttttg gagtcgcaac
     4021 aagtttccgt atcggtcaac cacatcaagg ataccgttgg tttgactggc aagtggataa
     4081 acttctccat tagcgtctgt tacaacggta ttttccactt tgatcgttac ttcgtagtct
     4141 ttgagaagtg gtcgagaagg tctaaaaatc ttaccgtctg cactgatgta aatgtcctct
     4201 tcgccatctt tcttactata gacaactccc tttgcatcac ggtaggtgat ggtactacca
     4261 tttttttgct gcgtaaagac agtatggaga ttgtcctcaa agaggagatt gccttgggca
     4321 tctgtctttt gtgtcaaact ttgtccatta gcatcaacaa atttttgtgt tgcactgttg
     4381 taagtgtagg tgtttccatg atcgtcttgg tactgaatag caccattgac tttttggtag
     4441 ttgggataga cgacttcttt atttgggtcc gttttcttaa tcttgaaatc acccaagagg
     4501 tcctttggtg tctctgatcg tgaccaacct gcaccaaatc cctcagttgg tacgtagtag
     4561 tcaatgaacg gacgaagtac aaaaatagtc tgtctagcat gcatgcccat gtggtagctc
     4621 agcctgttta ggtcttgcgg ttcaggactt ggtgttttct ttttggcctt aacaatcgca
     4681 aaataggtat tctgctgctc ggaaccacca aaatcagcct tccactcggt ggcattgtac
     4741 ttggtaaatc tcttacctgt tgagacctgc tcgcctgctt caggattgta gggatctacg
     4801 gtagccatgg gtggtaccat agaggtcggc tgattattgg catattgacc attatagcct
     4861 tggaagagct tgacatccac aatctctaac tcagctcctt ctggtcgtag ataaatttcc
     4921 caggccccag atccactatg atttctattt ccattatata cgaaatagta gtaaagatag
     4981 gtcctatcct catacactgg aaagataatt tcacgaccaa aagaggtggt ctggttatga
     5041 tttgtaccga agtcatacag tctttcaaag agttgggtcc gctggttgac ataaacacca
     5101 ctcaagtttg gatctccatt cgcatcttga aaagtcactg gtgttgtgtc catatattga
     5161 gaggtgtagg taatgctacg ccctaagaac catggatttc cgttagcagc ggttgctcct
     5221 gcctgctccg tcatcagcat gaagttagga taaaaacctt catagaagtc atatttttga
     5281 atctgttcat caaggtcata gacatcccat tctaactttg tatccgttcc attgggacga
     5341 atccgccgtg tactacggtg acgaccatta ccatctgtca tagccgtcag gttggtttta
     5401 tcaatcagct taccgacgat ggcatcccct tcgattggcc ctttatcatt ggcatacttt
     5461 tgaacgacga aggtcagctc gcctgccttt gtataataga catttagaat cggaatcccc
     5521 gaaggctcgg tagcactgcc tcgtgttaca atctggaaga acaaatttcc tatgtgtgtt
     5581 tctgtgtaac ggtcctctac actatccaaa cggtcataag gaaccgtctc gttatcatca
     5641 tacatcggag cacggttcag caagatttga ttcccaaact tcaatgtgaa gtaatcacct
     5701 tcttttgctt ctgctggtag tttccacttg acgtccatac cagcaccgta ggtattgtat
     5761 ccatcttgga actgataata gccaaagaca tcaatgttgg cgtaagtgat accgtaggtc
     5821 tctacacctg gggcaagagt tgtatttact gcagctcgct ccgatacaga tcgtgaacgt
     5881 cgtgttgcac gagccaaact ttcttttggt tggttggtga cgagaactgt cttagcaggc
     5941 tctgattctg ttagttctac cgcttctatt tgttcagcga gattataact tgaggtagaa
     6001 gtgagttgct tgatggtgta agtccctagt gcgatatttt caaaggtcac atttccgttt
     6061 aaatccgtct tccctttcgt cgtttgttcg ggatggtcca ctggggaaat ttcaaactca
     6121 ctttctgtca ggggaacctt tgggtctgga ttattctctt catatgctct gagctgaatg
     6181 gtcaggctac ctggggctct tggcatctcg gttgatgcat ctagctctgt cgtttcttgg
     6241 tttgcaaata ccgattgatt ttctttgaga atggtcaggt aacgctcgtt ggtcaccgcg
     6301 accatttccc cagtctgaac ctcagcaacc tttttgaaga caaaaacatg ttcctcaaat
     6361 cgcttgctac tgtcatttgg gtctgtattt aaggtgacag ggcggtcagc actgggtttg
     6421 attttcagtg aatagtagcc ttcgccataa accggtaatt gttcgaggcc ggccgcgagt
     6481 gcgtcgctac ctgctgctgc aaccttccta tcattttcat tataagcctc atctcggtag
     6541 aaaccctcag gaagtatatc ctgaccttgg tcattttgtt gcaaagccag accgctttgt
     6601 agcaccaagg tcaatccttg ctcgttgatt tctccttctt cagctttgag tttgacaacc
     6661 agctgctcgg tgtttgtttg ttccttatca atggtaagtg atagcttgga agcatcctct
     6721 ttataatcct ctatgtaagt atcgcgtatc cttactcctt ctgagatagt ttctgataag
     6781 gcaaggactg gcgttgccac agaatctact actaacaagg cgagtaaaca cttactcact
     6841 acctttttcc acgatttcat ttctttttcc tctcctatgc ttagccaatt gctgaatcca
     6901 ttgtggctat acaactacaa tggtgaacag tctaacgttt cacacttcta ttgattttta
     6961 tatcctaaat gacaaacaaa tagtatcaag ctttacaaga ccctgctcga ctactttgtc
     7021 tcttttttta aaactgattt cgtccaagat gtagtgataa actttctttg tgctgaaatg
     7081 acggttgcgg gttcattctt tctctcaaaa aaaagtttct ctttacttct atgggttcct
     7141 gtttccgaca attgcgactt ccttgctcac atgggaacaa ggcgcagaaa ccatttttac
     7201 atcgtgacgc tt
//
LOCUS       DASFQS010000100         7074 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.104, whole genome shotgun sequence.
ACCESSION   DASFQS010000100 DASFQS010000000
VERSION     DASFQS010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7074
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.104"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..266)
                     /locus_tag="U1041_001883"
     CDS             complement(<1..266)
                     /locus_tag="U1041_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000918338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEM4768972.1"
                     /translation="MAGNIKGITIEIGGDTQPLQDALKGVNKQASEATKELRQIDKAL
                     KFDTGNVTLLTQKQEVLAKQVETTKEKLATLRQAQSQVEAQFKAG"
     gene            complement(449..868)
                     /locus_tag="U1041_001884"
     CDS             complement(449..868)
                     /locus_tag="U1041_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768973.1"
                     /translation="MRESITIAGTTYELATNAYTPIAYKEQFGKDYFQDLFSMVNSQA
                     ILAKLDQLEDGEELQAHHIDVSILSDFDMTFFHRIFWVFAKSANPRVKPFVDFYMEME
                     EFPVQEVAPVLMNMLNQGMSTRKKQMKQKQRVKKSSQ"
     gene            complement(880..1449)
                     /locus_tag="U1041_001885"
     CDS             complement(880..1449)
                     /locus_tag="U1041_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4768974.1"
                     /translation="MAEKNKVTFGLQDVHWAEVTSEGPDGTLTYGNVERLRGAAELTL
                     EPTGDKGSYKADNINFYTTESKDGYGGTLKVALLTQEFLTRVLGEQLDATTNTISEIA
                     NSEKKNFALMFRFEGDKKETLHVLYYCYASRPTVGSKTKSGSDINEVELTFTASPRPL
                     DKVVRRRTTEETSDEIRENWFKAVFEPRK"
     gene            complement(1451..1777)
                     /locus_tag="U1041_001886"
     CDS             complement(1451..1777)
                     /locus_tag="U1041_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4768975.1"
                     /translation="MLLSEMYSILKELQLPVAYHHFEEGSHPRPPYLVYLVTDSENHG
                     ADNWTYHKQNNLLVELYTTKKDLATEQKVESLFDSHLIYFEKVETYISSEKLYQITYY
                     ITLHGG"
     gene            complement(1784..2152)
                     /locus_tag="U1041_001887"
     CDS             complement(1784..2152)
                     /locus_tag="U1041_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HEM4768976.1"
                     /translation="MTRIELDALETGIENELAEFVEDTTEVMREVVEEVTEESIVTLK
                     ATSPRKSGSYAKGWKSKATIDTSTGLTKTIHNRTPGLTHLLENGHAKSSGGRVEGIKH
                     IAPVEKQAIQSLEEKLRKRV"
     gene            complement(2145..2483)
                     /locus_tag="U1041_001888"
     CDS             complement(2145..2483)
                     /locus_tag="U1041_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000684963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor protein"
                     /protein_id="HEM4768977.1"
                     /translation="MKIAPLRERLSFQIRQIVQDEIGNETSTWIPLFDRWCSCRPLTL
                     TERDGSVTKLEQEKVQFTLRYEKAILGLHSLTTHIQFRGQTYEIESIDGDTVPRQLIY
                     IVAIREESYD"
     gene            complement(2483..2740)
                     /locus_tag="U1041_001889"
     CDS             complement(2483..2740)
                     /locus_tag="U1041_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HEM4768978.1"
                     /translation="MVSLAEAKQYLKVEHDDEDGLIEQLLETSQQLCEDILRQSIYSD
                     VLKTAILYGVAYLYEHREDANHKELKETLYHLLLAERKDVF"
     gene            complement(2743..3948)
                     /locus_tag="U1041_001890"
     CDS             complement(2743..3948)
                     /locus_tag="U1041_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEM4768979.1"
                     /translation="MSTLLELKEKRNQAWQQAKTFLDSVRTEDGLVSEEDSKRYDDME
                     AKINLYNQEIARLERQEKIDLELAQPASQALIGQPTTVLNDKTTEEEKKGVASDSYAK
                     TFWTSVRKRHFFDVKDVLRVGEDTEGGHLVPDEYEKKLVQGLQEENFFRSLATVIKTS
                     SGERKIPVVTGHGSASWMDENGLYPETEETFGQVTLDSHKIGTAIRISEELLNDSVFD
                     LESYMTAEFARRIGTEEEKAFLIGDGSKKPTGVFTQAEVTGPTTATKDITFDDMIELY
                     HSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNRPYYTSTFA
                     PLPEAGNKAIVFGDFSYYWIADRQGRTFKRLNELYANNGQIGFLASQRVDGKLVLPEA
                     VKTLTVKAK"
     gene            complement(3967..4662)
                     /locus_tag="U1041_001891"
     CDS             complement(3967..4662)
                     /locus_tag="U1041_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HEM4768980.1"
                     /translation="MHKFWNFTEDDSGRTLRIEGQIADETWFGDEVTPQVFKNDLHAG
                     NGDITLWINSPGGDVFAAAQIYNMLMDYKGDVHVMIDGLAASAASVIAMAGTTVSMSP
                     VAMMMIHNPWTVAQGEAKDMQKVIEMLGEIKESIINAYELRTGLSRTKLSHLMDSESW
                     FNAKKAVELGFADKILFDKQGEHGTDIESYSFSRTAAQKDLLVKMQVKLEVQQPKKTI
                     PINQLEKRLNLLK"
     gene            complement(4655..5938)
                     /locus_tag="U1041_001892"
     CDS             complement(4655..5938)
                     /locus_tag="U1041_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003054967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM4768981.1"
                     /translation="MGLLDLLGRKRARDKPRNSYEGQDFSYLFGRTTSGENVDEFKAM
                     QTTAVYACVRILAEAVASLPIHVYERTATGKEKKVDHPLYFLLHDEPNPEMSSFVFRE
                     TLMTHLLIWGNAYVQIIRDRSGQVISLYPLLPDKMSVHRDESGKLYYKYKRQSEENPN
                     FKEKGDAILRAEDVLHVPGLGFDGLIGYSPIALAKNAIGMTLATENYGASFFKNGANP
                     GGVLEHPGILKDPKRVRDSWNAVYNGVTNAHKVAVLEEGMKYTQIGIPPEEAQFLQTR
                     KFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFL
                     PEEKKTYFVKFNVDGLLRGDYQSRMNGYAIGRQNGWLSTNDIRELEDLNLLSDEEGGN
                     LYLINGNMTKLKDAGGFMKQAPLEQETQYEEDMDA"
     gene            complement(6079..6450)
                     /locus_tag="U1041_001893"
     CDS             complement(6079..6450)
                     /locus_tag="U1041_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001221831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HEM4768982.1"
                     /translation="MKVLTVEQVIELHTRLIQATGGLDGVRDVGLIESSLSSAFSTYF
                     GVEKYPSIEEKAARLCYSLVNNHAFLDGNKRIGVFVMIIFLELNGIVLNQTDDEVVKL
                     GIGVASSELDYDAILEYIRNH"
     gene            complement(6447..6704)
                     /locus_tag="U1041_001894"
     CDS             complement(6447..6704)
                     /locus_tag="U1041_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001166641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEM4768983.1"
                     /translation="MQINIENLVSISEANQNFSKVARMVDTNGTAVILKNNTPKYVLV
                     DYQSLIKEEQASPTVVEQSTLDEVATSVLSRHLDAFKELAK"
     gene            complement(6775..>7074)
                     /locus_tag="U1041_001895"
     CDS             complement(6775..>7074)
                     /locus_tag="U1041_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HEM4768984.1"
                     /translation="MGLTMVPFGQGYKDMSPPSKELYKLMMEGKIQHGGHPVLKWMGQ
                     NVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGLDRCIRHQTDVGSVYDERGILSF"
BASE COUNT         1901 a         1621 c         1272 g         2280 t
ORIGIN      
        1 ccagccttaa attgagcttc cacctgtgat tgggcttgac ggagcgttgc caatttttct
       61 ttggttgtct cgacttgttt tgccaagact tcctgctttt gcgtcagaag agtgacattg
      121 cctgtatcaa acttgagagc cttatcaatc tgtcttaatt ctttggtagc ttcagatgct
      181 tgcttattta caccctttag ggcatcttgt aatggttggg tatcgccacc aatttcaatc
      241 gtaattccct ttatgtttcc agccatagtc cctcctttct accatcagaa attatcaaaa
      301 tcagcttgag ttgctgggcg tgtttgagaa gtttctcgag tacgcatctc cacatagtcc
      361 gtttggtagt caagtgccat cccaatagag atatgtttta aatcgtcaat agtcagacca
      421 gtctccttac aacaggagaa ataactctct actgtgaaga tttcttcact cgctgtttct
      481 gtttcatctg cttttttctg gttgacatcc cttggttcaa catattcatc aagacagggg
      541 ctacttcctg cactggaaat tcttccatct ccatataaaa atccacaaat ggtttcactc
      601 gtggattagc tgacttcgca aagacccaaa agattcgatg gaaaaatgtc atatcgaaat
      661 cagacagaat agaaacatca atatgatgtg cctgtaattc ctctccatct tctaactggt
      721 caagttttgc caagattgct tgactattga ccatcgagaa taaatcttga aaataatcct
      781 taccaaactg ctctttataa gcgattgggg tataggcatt ggttgctaac tcgtaggtcg
      841 tgcctgctat ggtaatactt tctctcattg ccttctccct tacttacgag gctcaaaaac
      901 tgccttgaac cagttttcac gaatctcatc gctcgtttcc tctgttgttc gtcgacgtac
      961 aaccttatca agtgggcgag gactggcagt aaaggtcaac tctacctcat tgatatctga
     1021 accagacttg gtttttgaac caacagtcgg acgagatgcg taacaataat acaaaacgtg
     1081 taatgtttct tttttatccc cttcaaaacg gaacatcaac gcaaaatttt tcttttcgct
     1141 gtttgcgatc tctgaaatgg tgtttgtcgt cgcatccaac tgttctccaa ggactcgtgt
     1201 caaaaattcc tgcgttagaa gggcaacttt tagtgttccc ccatagccat cctttgactc
     1261 tgttgtataa aaattgatat tgtctgcctt ataagaaccc ttgtctcctg ttggttcaag
     1321 ggttaattct gcagcaccac gaaggcgttc tacattgccg tatgtcaacg taccatcagg
     1381 accttcgctt gtaacttctg cccaatggac atcttgtagt ccaaaggtga ccttattctt
     1441 ttcagccata ttatcctcca tgtaatgtga tgtaataggt tatttggtag agtttctctg
     1501 atgagatata ggtctctact ttttcaaaat aaataaggtg gctgtcaaat aatgactcca
     1561 ccttttgttc agttgctaaa tctttcttag tggtatagag ttccactagc aggttattct
     1621 gcttatgata ggtccaattg tctgcaccat gattttctga atcagtcacc aaatatacta
     1681 gatacggtgg tcttggatga ctcccttctt caaaatgatg gtaggcgact gggagctgta
     1741 attctttgag aatggagtac atttcactca gtaacatgtc ctatcacact cgctttctca
     1801 gcttttcttc taaggattgt atcgcttgtt tctcaacggg agcgatatgc ttgattccct
     1861 caactcgccc accagagctt ttggcatgac cattttctaa cagatgcgtc aggcctggcg
     1921 ttcgattatg aatggtcttg gttagacctg tactggtatc aatcgttgct ttactcttcc
     1981 accctttggc ataggaacca ctctttctag gtgacgttgc tttcaaggtt acgatggatt
     2041 cctcggtgac ttcctctaca acttcacgca tcacctctgt ggtatcctct acaaactccg
     2101 ccagctcatt ttcgatgcca gtttctagtg catctagttc aattctagtc ataactctcc
     2161 tccctaatgg cgacgatgta aatcagttgc cttggcactg tatctccatc aatagactca
     2221 atctcatagg tttgaccacg aaattgaatg tgagtcgtta aggaatgaag tccaagaatt
     2281 gccttttcat acctgagggt gaactggact ttctcttgtt ccagtttcgt cacactccca
     2341 tccctttcgg tcaaggtgag aggacgacaa gagcaccacc ggtcaaataa aggtatccat
     2401 gtcgaagttt cattgccaat ctcatcttga acaatctgtc gaatctgaaa tgacaagcgt
     2461 tccctcaacg gtgcaatctt catcagaaca catcctttcg ttcagccaac aacaaatgat
     2521 agagagtctc tttcaactcc ttatgattgg catcttctct gtgttcataa agataggcaa
     2581 ccccataaag gattgccgtc tttagaacgt ctgaataaat tgattgtcgc aaaatatctt
     2641 cgcagagttg ttgactggtt tcaagcaact gctcaatcag tccatcctca tcatcgtgtt
     2701 ccactttgag atactgtttt gcttctgcta aactaaccat gactacttag cctttactgt
     2761 tagtgtcttc acggcttcag gtaggactaa cttaccatca acacgttgtg aagcaagaaa
     2821 accaatctgt ccattattgg catagagttc gttcaaacgt ttgaaggtac gaccttgacg
     2881 gtccgcaatc caataatatg agaaatcacc aaatacaatg gccttgttgc ctgcttcagg
     2941 aagtggggca aaggttgatg tatagtatgg acgatttaga atcaaatctg gttgtccagc
     3001 ttgagtagat ggctgccaaa tgtaattgcc attattatct ttgagtttac ggatagcttt
     3061 gacagtcgta tcatgtaaaa tccaaacagc gttcttacga tagggtgctg gtagagaatg
     3121 atacaattca atcatgtcat caaaggtaat atcctttgta gcagtcgttg gacctgtaac
     3181 ttctgcctga gtaaagacac ctgtcggttt cttagaacca tcaccaatca agaatgcctt
     3241 ttcttcttcc gttccaattc gacgagcaaa ttcagctgtc atataggatt caaggtcaaa
     3301 gactgaatcg tttagcaact cttctgaaat gcgaatggca gtaccaatct tatgagagtc
     3361 gagtgtcact tgaccaaagg tttcttctgt ttctggatat aaaccatttt catccatcca
     3421 tgaggctgaa ccatgtcctg tcacaacagg aatcttacgc tcaccactag atgttttgat
     3481 aacagtcgca aggctacgga agaaattctc ttcttgtaat ccttgaacta gtttcttctc
     3541 atactcatca ggaaccagat gaccaccttc ggtatcttcc ccaactcgaa ggacatcttt
     3601 gacatcaaag aagtgacgct tacgaacact tgtccaaaaa gtcttggcat agctatctga
     3661 agccacaccc ttcttttcct cttcagtagt tttgtcattc agaactgtag tgggctgccc
     3721 aattagagcc tgtgaggctg gttgagcaag ttcaaggtca atcttttctt gtcgctccaa
     3781 tcgagcaatc tcttgattgt agaggttgat ttttgcttcc atatcatcat agcgtttgga
     3841 atcttcctca gatacaagtc catcttctgt tcgaacagaa tcaaggaagg tttttgcttg
     3901 ttgccaagct tggttacgtt tttctttcaa ttcaagtaat gtagacatca gttcatattc
     3961 ctttcgttat ttgagcaaat tcaatcgttt ttccaactga ttgatcggga ttgttttctt
     4021 tggttgttgg acttcaagct ttacctgcat tttgacaagt aaatcttttt gggcagcagt
     4081 tcgactgaaa gaataactct caatatcagt tccatgttct ccttgtttgt caaagagaat
     4141 cttgtccgca aagcccagtt caacagcctt tttggcattg aaccaagact ctgagtccat
     4201 gagatgtgat agtttggttc ttgaaagtcc tgttcttaat tcataggcat tgatgatgga
     4261 ttccttaatc tctcccaaca tttcaatgac cttctgcata tccttggctt caccttgtgc
     4321 cacagtccaa gggttgtgaa tcatcatcat ggcaactgga ctcatagaaa ccgttgtacc
     4381 tgccatggca atgacactag cagcacttgc ggctaagcca tcaatcatta catggacatc
     4441 acctttgtaa tccatcagca tgttatagat ttgagcagcc gcaaaaacat caccccctgg
     4501 actattaatc cagagggtga tgtctccgtt tcctgcatgt aaatcatttt taaatacttg
     4561 tggcgtgact tcatcgccaa accacgtctc atcagcaatc tgtccttcta tacgaagtgt
     4621 tcgaccacta tcatcttctg taaaattcca aaacttatgc atccatatcc tcctcatatt
     4681 gagtttcttg ttctaacggt gcttgtttca taaaaccacc tgcatccttc agtttcgtca
     4741 tgtttccatt tatcaagtag agattacctc cttcctcatc tgaaaggaga ttcaagtcct
     4801 caagttcacg tatatcattt gtcgacagcc agccattttg tctaccaatc gcatacccat
     4861 tcattcgact ctgatagtca ccacgaagaa gaccatctac attgaacttc acaaagtagg
     4921 ttttcttttc ttcaggtaaa aaaagagacc tcttgaaagc ttgttcgaga cgaactaccc
     4981 aagggtctaa ggtatattta acaaattcta gagattgttg ctcaatgttt gaaaatgagg
     5041 atttctccaa gtcaccaacc atatgaggtg gaatgcggta gagccttgca atttcattaa
     5101 tttggaattt tctagtttgg agaaactggg cttcttcagg tggaatgcct atttgagtgt
     5161 atttcatccc ttcctcaaga actgccactt tatgggcatt ggttacccca ttgtagactg
     5221 cattccatga atctctcact cgtttgggat ccttgagaat ccctggatgt tccaaaacac
     5281 caccaggatt tgcaccattc ttaaagaatg atgcaccata gttttccgta gccaaggtca
     5341 taccgatggc attttttgca agggcaattg gagaatagcc aatcaatcca tcaaaaccca
     5401 gacctggaac atggagaaca tcttctgctc tcaagatagc atctcccttt tccttaaagt
     5461 ttggattttc ttctgactga cgcttgtatt tgtaatagag cttaccactt tcgtctcgat
     5521 gaacagacat cttatctggt aagagtgggt aaagactgat aacttgtcca ctcctatctc
     5581 ggataatctg gacataggca ttgccccata tcaatagatg ggtcatcaag gtttctctaa
     5641 agacaaagga tgacatctca gggttaggtt catcatgcaa gagaaaataa aggggatgat
     5701 ccaccttttt ctcctttcca gttgccgttc tctcataaac atgaatgggt agtgaagcta
     5761 ctgcttcagc taagatgcgg acacaagcat agacagctgt cgtctgcata gccttaaact
     5821 catccacatt ctccccactg gtcgttcgtc caaacagata tgagaagtcc tgaccttcat
     5881 aactatttcg tggtttatct ctagcacgct tacgtcccag taaatctagt agtcccatac
     5941 ttcctccttt tgagtacgaa aaaagcacct cgattgaagt gcttatcgtt tattcttata
     6001 tggttttcat ctctccttct tcaagaagat accatgttct atcactttct tgaagttata
     6061 tcctcaataa gaaaagtttt aatgattccg aatgtattct aaaattgcat cataatctaa
     6121 ttctgatgaa gctactccaa ttcctagttt cactacttca tcatcagtct gatttaacac
     6181 aatgccattt aattctagga aaataatcat gacaaaaact ccaattcgct tgttcccatc
     6241 aaggaaggca tgattattaa ctagcgaata acaaagtcta gcagcctttt cttcaatact
     6301 tggatacttc tcaacaccaa aataagtact aaaagctgaa gatagtgaag attctattaa
     6361 accaacatcc ctaacaccat ctaaaccccc agtagcttga attaacctag tgtgtaattc
     6421 aataacctgt tcaacagtta atactttcat tttgccaatt ccttaaatgc atcaagatgg
     6481 cgtgataaaa ccgaagtcgc aacttcatcc aaagttgatt gttcaacaac cgtagggctt
     6541 gcctgttcct ctttaattag actctgatag tccactaata catactttgg tgtgttattt
     6601 ttcaaaatta ctgcagtacc attcgtatca accatacgag ctaccttaga aaagttttga
     6661 tttgcttcag aaatagagac taagttttca atattgattt gcatggtaat atcctccttt
     6721 tctctattct accacttttt aggatatatt caacctattt aggttgaata tatcctaaaa
     6781 actcaatatt ccacgttcat catacacact tcctacatcg gtttgatgac gtatacaacg
     6841 gtccagtccc ataatgagtg ctacaatacc gtcaatcttc tcgactgact tttccttatc
     6901 aggcttgata ttaccagcag ggtcttgtct catgactacg ttttgtccca tccatttcag
     6961 aactggatgc ccaccatgtt gaatcttgcc ttccatcata agtttgtaaa gttcctttga
     7021 tggtggactc atatccttgt atccctgacc gaaaggcacc atggtcaagc ccat
//
LOCUS       DASFQS010000101         7052 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.105, whole genome shotgun sequence.
ACCESSION   DASFQS010000101 DASFQS010000000
VERSION     DASFQS010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7052
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.105"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            135..893
                     /locus_tag="U1041_001896"
     CDS             135..893
                     /locus_tag="U1041_001896"
                     /inference="COORDINATES: protein motif:HMM:NF025751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4422 domain-containing protein"
                     /protein_id="HEM4768985.1"
                     /translation="MSIYIITHKVFEEFTELNDYKTLLVGADKNQGLPNYQRDNDFIG
                     NLSSKNSNYCELTGAYWIMKQSKDDIVGLVHYRRFFANASGNALSMDEIQQELQEYDI
                     ILPEKITGTFCKIPCGAKMHFITGHGREGKEAWEACARIIKNSFPEMSSAFDKFEKDR
                     EGYFYNMCIMNKTDFDSYHTWLFDILFQLEKEIDVKCYSKYNQRMFGFLSERLLTFWV
                     KYHNMRVKEAPVIFTEPISFMDNMKQLITRRLEK"
     gene            894..2357
                     /locus_tag="U1041_001897"
     CDS             894..2357
                     /locus_tag="U1041_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004231348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HEM4768986.1"
                     /translation="MSNEAKVSSVKLNFVMNFILTLSGIIFPLITFPYASRILLPVGT
                     GKVAFVTSVVSYFTMIGMLGIPTYGIRACAKVRDDKEKLSKTVQELMIINFIMMTVAL
                     FFYILAFNFVPRFAEDKGLFMLNIAVLVLNLIGCDWLYKGLEQYQYITKRSVLFKVIA
                     VILMFLFVKEQGDYIAYAIITILASVGSYIFNFVNLRTLIKIQPYDNLDIKQHIRPTL
                     TFFMMTVATTIYTSLDSVMLGFMLGDESVGYYNAAINIKNVLVSLVTSLGVVLLPRLS
                     VYIQQQKQEEFKALTSKALTFVIFSSLPLTIFFIYFADWAVYFLSGMSYTGAIVPMQT
                     VMPTLLFIGLSNLFGIQMLVPMNKETVVVKSVFIGAVVNLVLNSIFIPILGVVGAALG
                     TLVAEFFVTSYQAFILKDILKEINRQIEFYKFLLAAIVASVPVILLANLHSNNSYFIN
                     LAISAILYGSIYCLLLLLLRESNSLDILKSLQNRRGN"
     gene            2357..3466
                     /gene="glf"
                     /locus_tag="U1041_001898"
     CDS             2357..3466
                     /gene="glf"
                     /locus_tag="U1041_001898"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004226511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HEM4768987.1"
                     /translation="MKTYDYLVVGAGLFGAVFAHEAAKKGKKVKVIEKRDHIAGNIYT
                     KEVEGIQVHEYGAHIFHTSEKEIWDYVNRFAEFNRYTNTPVANYKGEIYNLPFNMNTF
                     NKLWGVVTPAEAEAKIAEQRAVLGGKTPENLEEQAISLVGTDIYEKLIKSYTEKQWEK
                     PCTELPAFIIRRLPVRLTYDNNYFNDTYQGIPIGGYTQIVEKMLEHENIDVETNVDFF
                     ANKEEYLATYPKIVFTGMIDEFFDYELGELEYRSLRFETEVLDMENYQGNAVVNYTDS
                     ETPYTRIIEHKHFEYGTQEKTIITREYSKTWKRGDEPYYPVNNDRNNKLYTAYKRLAE
                     QQENVIFGGRLGHYRYYDMHQVIGAALQCVRNELS"
     gene            3493..4482
                     /locus_tag="U1041_001899"
     CDS             3493..4482
                     /locus_tag="U1041_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HEM4768988.1"
                     /translation="MNIVYTLNDVFVPQVATSMCSILENSSMPKQAHFYLLSEGISSV
                     NQKKLLEFVEKYGASISFIELEKLENYFEFSFDTNGWSSIVLARLLIDKLLPEEVERI
                     IYLDGDTLVLGDLFQLWEEELGGKIIGMSPEPTVDSNRRADLDLGSHSYHNAGVMLID
                     LRGWRDNNIGSKILSYYQNKNGQLFANDQDAINGGVKEYIKTLSIAYNYFNIYDTYPY
                     KTLEKLSSPANFIDKESYNLAKAKPVVIHYLGEERPWRHWNTHKYRNEYHFYLEKTPW
                     DNTPMEEGWFIYFQCFKIFNFVMKPFPMLRYRIINSLIPAFMKFRKMKLQKNR"
     gene            4491..5207
                     /locus_tag="U1041_001900"
     CDS             4491..5207
                     /locus_tag="U1041_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4768989.1"
                     /translation="MKVLMIIPAYNEEESILQTVQGIIDYRNSVNFQLDYVVINDGST
                     DSTKEILIQNKLNAVHLVQNLGIGGAVQTGYKYALDNDYDVAVQFDGDGQHDIRSLNS
                     LIQPILVGQADMVIGSRFVGDTLSEFQTSFMRRFGIGVISNMIKLTTGNRIWDTTSGY
                     RLGNRKVIAQFAKRYPIKYPEPESTVHLLKQNFQVVEAPANMFERAGGVSSITPFKSI
                     RYMVEVCSSILIASLMKEGE"
     gene            5207..5563
                     /locus_tag="U1041_001901"
     CDS             5207..5563
                     /locus_tag="U1041_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2304 domain-containing protein"
                     /protein_id="HEM4768990.1"
                     /translation="MTIQALAMFLASLGFLYFIFRNINKNKILFEHAFMWIVIGFGLI
                     VFALFDVIPIKLAYLFGFGLTSNFLLSVAIFVLLVIGFLHSMALSQQKQQIKNLIQEV
                     SMAKKRIAELEEHHAE"
     gene            5553..6341
                     /locus_tag="U1041_001902"
     CDS             5553..6341
                     /locus_tag="U1041_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002886818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4768991.1"
                     /translation="MQNNHTFVICAYGDSKYLEECIHSLKQQTLQSQLILYTSTPSEY
                     IEQICQKNAIVMHTAQGGGIGKDWNLALSFVTTPYATIAHQDDVYLPDYCEKIMSQMT
                     EETLIAYSDYQEVKEGVAIPLTSNLKIKQLMLRTMAMFPKWKFWRNRVLAFGNPISCP
                     AVTYNLKKLNDFKFNEEMKVSLDWFAWYQIAQKNGSFTFVDESLMYHRIHEESETTNS
                     IENNIRTQEDYEMYLLFWPEFIAKFLLRYYVKSQETNGGNNGEK"
     gene            6328..>7052
                     /locus_tag="U1041_001903"
     CDS             6328..>7052
                     /locus_tag="U1041_001903"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM4768992.1"
                     /translation="MGRNKIEGNTRTRKRTRCRFIDIYILINVSLFMCLLVGYKHFSL
                     LRDGYIPLNTVLEKQSFKKTSAGQYEKKIGDLSYSLLIDTDKNRVTKAGYQFDISNNI
                     QHFLWMDYLSADKIEEIFNLQVSLNGIFVDVQNIEFSQHQWIEKFPNLIAHAGGTYRE
                     KSYNTFYTNSLEALQQNYSMGHRVFEMDFYLTSDGKMAAVHDWDQFGYMNGVALSSDE
                     WKNFQTFGSPVTDSRFTTMLIGDV"
BASE COUNT         2315 a         1041 c         1375 g         2321 t
ORIGIN      
        1 caaaagtgaa tttgatagta ggaacactag cttttaattt tatagtatat cttattttga
       61 ttggagtata ttactggttt tagagagtgt ttttgtaata gattatgacg agattaaatt
      121 aaaatggaga gactatgtca atttatatta ttacccataa agtttttgaa gagttcacag
      181 aacttaatga ctataaaaca ttgttagttg gagcagataa gaatcaaggg ttaccaaatt
      241 atcaacgcga caatgatttt ataggaaatt tatcttctaa aaatagcaac tattgtgaat
      301 taacaggtgc ctattggatt atgaaacaaa gtaaagatga cattgtcggt ttggtacact
      361 atcgacgatt ctttgcgaat gcttctggca atgcacttag tatggatgaa attcaacaag
      421 aacttcaaga atacgatatt attctcccag agaaaattac tggaactttt tgtaaaattc
      481 cttgtggagc caaaatgcac ttcattaccg ggcatggtag agaaggtaag gaagcatggg
      541 aggcttgtgc tagaataata aaaaatagtt ttccagaaat gtcatcagca tttgataagt
      601 ttgaaaagga tagagaaggt tatttttata atatgtgtat tatgaacaag accgatttcg
      661 attcttacca cacatggtta ttcgatatcc tatttcaatt agagaaagag attgatgtaa
      721 agtgttatag taaatataat cagagaatgt ttggtttttt atctgagaga ctattaactt
      781 tttgggtgaa gtatcacaat atgagggtga aagaagcacc agttattttt acggaaccta
      841 tttcgttcat ggacaatatg aaacaattaa ttactagaag actggagaag tagatgtcaa
      901 atgaggcaaa agttagttct gtcaaattga attttgtaat gaactttatt ttaactctat
      961 caggaataat ttttccatta ataacatttc catacgcatc tagaatttta ttgccggttg
     1021 ggacaggaaa agtagctttt gttacctcag tagtttccta ttttacgatg attggaatgc
     1081 ttggtattcc tacttatgga attagagctt gtgcaaaagt aagagatgat aaagaaaaat
     1141 tatcaaaaac agttcaagaa ttgatgataa tcaattttat catgatgact gtagcactat
     1201 ttttctatat acttgcattt aactttgttc ctcgctttgc agaagataaa ggactgttta
     1261 tgctaaatat agcagtctta gtcttaaatt taataggctg tgattggtta tataaagggt
     1321 tggagcagta ccaatatatt actaagcgtt cagttctttt taaagtgatt gcagtcattt
     1381 tgatgttttt atttgttaaa gagcaaggtg attatattgc ttatgcaata atcactatat
     1441 tagctagtgt aggttcttat atttttaatt ttgtcaattt aagaacttta attaagatac
     1501 aaccttatga caatttggac ataaaacaac acataagacc gacacttacc ttttttatga
     1561 tgacagtggc aactacaatt tatacaagtt tagactctgt tatgttagga tttatgctag
     1621 gcgatgagtc ggttgggtac tataatgcag ctataaatat aaaaaatgtt ttagtgagtt
     1681 tagttacatc gcttggcgtt gtactattac ctcgtctatc tgtatatatt cagcaacaaa
     1741 aacaggaaga atttaaagca ttaacttcaa aagcactaac atttgttata ttttctagtc
     1801 taccattaac tatttttttc atctattttg cagactgggc agtttatttt ttatcaggga
     1861 tgtcatatac gggagctatc gttcctatgc aaactgtaat gcctacattg ttgtttatag
     1921 gattgtcaaa tctattcggt attcaaatgt tggttcccat gaataaagaa acggtcgtag
     1981 taaaatctgt ttttataggt gcggttgtca acctagtatt aaattccata tttattccaa
     2041 tacttggagt agtaggtgcg gctctcggta cacttgttgc agagttcttt gttactagtt
     2101 atcaagcatt tattttgaaa gatattttga aagaaataaa tcgccaaata gaattttata
     2161 aatttttgct tgcagcaatt gtagcgagtg ttccagttat tttgcttgca aacttacata
     2221 gcaataattc ttattttatt aacttagcga tatcagcaat tttatatggt tcaatttatt
     2281 gtttgttgtt attgctactg agagagagta atagtttgga tattttaaaa agtttacaaa
     2341 atagaagggg gaactgatga aaacttacga ttatctagta gttggtgcag gtttgtttgg
     2401 tgcagtattt gcccatgaag cagccaaaaa aggtaaaaag gtaaaagtga tcgaaaaacg
     2461 tgaccacatc gcgggtaata tctacaccaa agaagtagaa ggcatccagg ttcatgagta
     2521 tggtgcgcat atcttccata cttctgaaaa ggaaatctgg gattatgtca accgatttgc
     2581 agaattcaat cgctacacca acacaccagt tgccaactac aagggtgaga tttacaatct
     2641 tccatttaac atgaatacct ttaacaagct ctggggcgtc gtgactcctg ctgaagctga
     2701 agctaaaatt gcagagcaac gtgctgtgtt gggtggaaaa acacctgaga acttggaaga
     2761 gcaagctatt tcccttgtag gtacagacat ctatgaaaaa ttgatcaagt catacaccga
     2821 gaagcagtgg gaaaaaccat gtacggagtt gcctgccttt atcatccgtc gtttgccagt
     2881 gcgtttgact tatgataaca actatttcaa cgatacctat caaggcattc caatcggtgg
     2941 ttacacgcag attgttgaaa aaatgttgga acatgagaat atcgatgtgg agacaaacgt
     3001 tgatttcttt gccaataaag aagaatactt ggcaacctat ccaaagattg tctttacggg
     3061 tatgattgat gagttctttg attatgagct tggtgaattg gaatatcgta gccttcgttt
     3121 tgaaactgaa gtcttggata tggaaaatta ccaaggtaat gcggttgtca actatacaga
     3181 tagcgagaca ccatatactc gaatcatcga acacaaacat tttgagtacg gaactcaaga
     3241 aaaaaccatt attactcgtg agtattcgaa gacttggaag cgtggtgatg agccttacta
     3301 tccagttaac aatgaccgta ataataaact ctatactgcc tataagcgcc ttgcagaaca
     3361 acaagaaaat gttattttcg gcggccgtct gggtcactat cgttactacg atatgcacca
     3421 ggttatcgga gcagccttgc agtgtgtgag aaatgaactc tcatagttaa atagtaatga
     3481 ttagggtgac taatgaatat agtatataca ctaaatgatg tatttgtgcc acaagttgct
     3541 acgagcatgt gttcgatttt agaaaattct tccatgccca aacaagcaca tttttatctt
     3601 ctttcagaag gaatatcgtc tgttaatcaa aagaaacttt tagaatttgt tgaaaaatac
     3661 ggtgcttcaa tttcttttat tgagttagag aagttagaaa attactttga gttctctttt
     3721 gatacaaatg gctggtcttc cattgtttta gccaggcttc tgatagacaa gcttttacca
     3781 gaagaagttg aacgtatcat ttatcttgat ggtgacaccc ttgtcttagg agatttgttc
     3841 caattatggg aagaagaact tggagggaaa attattggta tgtcgcctga gccaacagtt
     3901 gattcgaata gaagggctga tttagattta ggtagccatt cttatcataa tgcaggtgtg
     3961 atgctaattg atttaagagg gtggcgcgat aataatattg gtagtaaaat attaagttat
     4021 taccaaaata agaatggtca gttgtttgca aatgaccaag atgcgattaa tggtggtgtt
     4081 aaggaatata ttaaaacgtt atcaattgca tataactatt ttaatatcta cgatacttat
     4141 ccttacaaaa cattagagaa attaagtagc ccagcaaact ttattgacaa agaatcatac
     4201 aatcttgcca aagcgaagcc agtcgttatc cattatctag gtgaggaacg tccatggagg
     4261 cattggaata cacataagta taggaatgaa tatcactttt atttagaaaa aactccttgg
     4321 gacaacactc caatggagga aggctggttc atttacttcc aatgttttaa aatattcaat
     4381 tttgtaatga aaccatttcc gatgttgaga tatagaataa tcaattctct aatcccggcg
     4441 tttatgaagt ttagaaaaat gaaattacaa aaaaataggt aaatattttt atgaaagtat
     4501 taatgattat ccctgcctac aatgaagaag aaagtatcct tcaaactgtt cagggaatta
     4561 tagattatag aaatagtgtg aatttccaat tggattatgt tgtcatcaat gatggttcaa
     4621 cagatagcac gaaagaaatt ttaattcaaa ataaattaaa tgctgttcac ctagtacaaa
     4681 atttaggcat tggtggagct gttcagacgg gatataaata tgccttggac aatgactatg
     4741 atgtagcagt tcaatttgat ggtgatggtc agcatgacat tcgttcatta aatagcttaa
     4801 ttcagccaat cttagttggt caggctgata tggtgattgg ctcacgcttt gttggtgata
     4861 ctttgtcgga atttcaaact agctttatga gacgttttgg aataggtgtc atttcaaata
     4921 tgattaaatt aacaactgga aaccgaattt gggatacaac atcaggttat cgtttgggaa
     4981 atagaaaagt gattgcacaa tttgcgaaac gatacccgat taaatatccg gaaccggaat
     5041 caactgttca tttactaaag caaaatttcc aagtagtaga agcaccggca aatatgtttg
     5101 aaagagcggg aggggtttct tcgattactc catttaagtc catccgctac atggtagaag
     5161 tttgctcatc aatcttgatt gcatcattaa tgaaggaggg agaataatga ccatacaagc
     5221 attagctatg tttcttgctt cactaggttt tttgtatttt atttttagga atattaataa
     5281 aaataagatc ttattcgaac atgcctttat gtggattgtt attggcttcg gactgattgt
     5341 ttttgcgctc tttgatgtta ttcctattaa attggcttac ttattcgggt ttggtctgac
     5401 ttccaatttc ttgttatctg tggcaatttt tgttctcttg gtgattggat ttttgcatag
     5461 tatggcttta tctcaacaaa agcagcaaat taaaaattta attcaggaag tatcaatggc
     5521 taaaaaaaga attgctgagt tggaggagca tcatgcagaa taaccataca tttgttatct
     5581 gtgcttatgg agatagtaag tatctagaag aatgcatcca ttcgttaaag cagcaaacac
     5641 ttcaatcaca actcatccta tacactagta ctccaagtga atatatagaa caaatttgcc
     5701 aaaagaatgc aatcgtaatg cataccgcac aaggaggagg tattggaaaa gattggaatt
     5761 tagcactctc ttttgtaaca accccttatg ctacaattgc tcatcaagat gatgtttatt
     5821 taccagacta ttgtgaaaaa ataatgtctc agatgacaga ggaaacgttg attgcttatt
     5881 cagattacca ggaagttaag gaaggtgtgg ctattccctt aacttcaaat ttgaaaatca
     5941 agcaactcat gttacggaca atggccatgt ttcccaaatg gaagttttgg cggaataggg
     6001 ttttagcctt tggtaatcca atttcttgtc cagctgtgac ctataatttg aagaaactga
     6061 atgatttcaa gtttaatgaa gaaatgaaag tttctcttga ttggtttgct tggtatcaga
     6121 ttgcacaaaa aaatgggagc tttacctttg tagatgagag tttgatgtat catcgtatcc
     6181 atgaggaatc tgagacgaca aatagcattg aaaacaatat tcgtacacaa gaagactatg
     6241 aaatgtattt gttgttctgg ccagagttta ttgccaaatt tctcttgaga tactatgtta
     6301 agagtcaaga aacgaatgga ggaaacaatg gggagaaata aaatagaagg aaatacacga
     6361 actcgcaaac gaacacgttg tcgcttcatt gatatatata tattaataaa tgtatcttta
     6421 ttcatgtgtt tactggttgg ctacaagcat ttttctttgt tgcgagacgg ttatattcca
     6481 ttgaatacgg ttttagaaaa acaatcattt aaaaaaactt ctgctgggca gtatgagaaa
     6541 aaaatcggtg atttatcata ctccttgctg attgatacag ataaaaacag agtgacaaaa
     6601 gcaggttatc aatttgatat tagcaataat attcaacatt ttttatggat ggactatctg
     6661 tcagcagata agattgagga aatattcaat ttgcaagtct ctcttaatgg aatttttgtg
     6721 gatgttcaaa atattgaatt ttcacaacat cagtggatag aaaaatttcc aaatcttatt
     6781 gctcatgctg gtggtactta tcgtgaaaag tcctacaata ctttttatac gaactcttta
     6841 gaagcgttac aacaaaacta ttctatgggt caccgagtat ttgaaatgga tttctattta
     6901 actagtgatg ggaagatggc agctgtccac gattgggacc aattcggcta tatgaatggt
     6961 gtagctttga gctcagatga atggaaaaat tttcaaactt ttggatcacc agtcactgat
     7021 tcacgtttta caacgatgct tattggtgat gt
//
LOCUS       DASFQS010000102         6808 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.106, whole genome shotgun sequence.
ACCESSION   DASFQS010000102 DASFQS010000000
VERSION     DASFQS010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6808
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.106"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            47..1687
                     /locus_tag="U1041_001904"
     CDS             47..1687
                     /locus_tag="U1041_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM4768993.1"
                     /translation="MSEKVEMQQSKEQATMARGLAWLTAGNILSRLLGVAYVIPWYIW
                     LGEYRAEANALFSMGYQIYANFLLISTAGLPTAIAKQVAKYNVLGKEEVSLYLVREFF
                     KLMLVFGAVFAGVMYLSAPWLADASGSKEKLLPVMYSLVPPLFIFPAMSILRGFFQGR
                     HDMKPYAISQLAEQLVRVIWILAATFMIMKLGSGDYLEAVVQSTFAAFIGMIASVGIL
                     VYTLWKQGYLGKLLHAKKQKISLDTGQLIKETVRDAIPIIILGLTIQLLQFIDQVTFI
                     RVMERITDYSNSELLELYSYMAANPSKITMMIIGISLSLGSVAIPLITEKFVKKDLKA
                     ASHLVADNLQLLFIFTIPAIVGTVLLAGPLYTIFYGPSEPIAITLFIWNLFLILPLGL
                     YSVISVVIQAIFENRRAIYYFLIGMLVKIVLQVPMIYVFKVYGSFISTIFGLGLMLYL
                     FYRRIDKVLHIDERLVIKDIATISWISIVMGLVVWGIEFVLNLILPANGYVSSFIHLA
                     VAGGAGMLVFVILTLKTRQLDRLIGSRAQSLRRKLRLG"
     gene            1854..2588
                     /locus_tag="U1041_001905"
     CDS             1854..2588
                     /locus_tag="U1041_001905"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004253279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEM4768994.1"
                     /translation="MMKPKYERILIKLSGEALAGERGVGIDLKTVQEMAKEIQEVAES
                     GIQIALVIGGGNLWRGEPAAEAGMDRVQADYTGMLGTVMNALVMADSLKQLGVDTRVQ
                     TAIAMQSVAEPYIRGRALRHLEKGRIVIFGAGIGSPYFSTDTTAALRAAEIEADAILM
                     AKNGVDGVYNADPKKDANAVKFNELTHREVISRGLKIMDATASTLSMDNDIDLVVFNM
                     NEPGNIKRVVFGEPIGTTVSNSSEEK"
     gene            2723..3280
                     /gene="frr"
                     /locus_tag="U1041_001906"
     CDS             2723..3280
                     /gene="frr"
                     /locus_tag="U1041_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006148672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEM4768995.1"
                     /translation="MSKEIIAKAQERMNQSHQSLAREFSHIRAGRANASLLDRISVEY
                     YGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVI
                     PALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDI
                     QKVTDDAIKTIDKMTADKEKELLEV"
     gene            3412..4266
                     /gene="cvfB"
                     /locus_tag="U1041_001907"
     CDS             3412..4266
                     /gene="cvfB"
                     /locus_tag="U1041_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001095445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding virulence regulatory protein CvfB"
                     /protein_id="HEM4768996.1"
                     /translation="MNDLLAQYIVGLVTDENDQFYFVQKEGRTFALSKDEGEHSLGQS
                     VKGFTYMDMKQKLRLTTKEVGASRTSFGWGTVTEVRKDLGVFVDTGLPDKQVVVSLDI
                     LPEIKELWPKKGDQLYVKLDVDKKDRIWALPAFQEDFQKMAGPAYDNMQNQNLRAIVY
                     RLKMNGTFVYLPDNNMLGFIHPSERFAEPRLGQVLEARVIGYRAVDRTLNLSLKPRSF
                     EMLENDAQMILTYLESNGGFMTLNDKSAPEDIKATFGISKGQFKKALGGLMKAGKIKQ
                     DSFGTELV"
     gene            4276..5196
                     /locus_tag="U1041_001908"
     CDS             4276..5196
                     /locus_tag="U1041_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000964166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEM4768997.1"
                     /translation="MLVYIAGSGAMGCRFGYQLSKTNHEVILLDNWEEHIEVIRENGL
                     KVTGDVEETVYLPIMKPTEAMREADFIILLTKADQLPKMLRDIKPIIGPTTKVLSLLN
                     GLGHATTMRRYVPDESIMVGVTMWLAELKGPGHAHLEGPGSMSVQHILGDEQSVADII
                     EMLNEAGLNVTYDNHVVSAIWQKACVNGVMNPTCTILDCTIGELFGTEAGLNLVQGIF
                     KEFIAVAKSEADGIDEEAIWKYVIDASKKASNHYPSMHQDLVQHGRKTEIDYLNGAVV
                     FKGKRAGIPTPYCQMITDMIHAKESMLGLR"
     gene            5206..5661
                     /locus_tag="U1041_001909"
     CDS             5206..5661
                     /locus_tag="U1041_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEM4768998.1"
                     /translation="MLIGVETIEEYMAALPKNRKEAVERLHQVIVEQLPAGFEVGILG
                     GMINYYVPLTAYPDGYHCTPGEPLPFLALASQKAHIALYHMGIYMDQELNDWFVAAYQ
                     AQVPTKLDMGKSCIRMKNPKNIPYELIGELVSKMSMERYIELYEKNHRK"
     gene            5667..5882
                     /locus_tag="U1041_001910"
     CDS             5667..5882
                     /locus_tag="U1041_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HEM4768999.1"
                     /translation="MRRSFYSWLMTQRNPKSNEPVAILADYAFDESDFPKQSDNFDEV
                     SRFLEESASFAFSMSDFDAIWEDYLGH"
     gene            6034..>6808
                     /locus_tag="U1041_001911"
     CDS             6034..>6808
                     /locus_tag="U1041_001911"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4769000.1"
                     /translation="MHKFFYEQRKAFSFRKLTIGLVSLCVGTSLLFGIQSQEVSASTV
                     SPSQIRFEYVLEAELSAEERQLIQSSLPAELKEEATYFVVYRPSKKVLPATGELAGSG
                     LAVLGLGFLVLAVSATKSKKARVLTMLYVTTSGLALPILEVGAVQSSALAAYNQTLTI
                     RPGDSLPDGKLRLDGYEFVGYFIEEKPEVKSQARDEKTSLSTSNQLEESKTSPETAEV
                     DKQISTGEVSGKPDQASQPIVEQADKTEQTGKAEESQDQA"
BASE COUNT         1948 a         1170 c         1652 g         2038 t
ORIGIN      
        1 aattgagttt ttcctatctt atatttacat agaaagtaat agaaaaatgt ccgaaaaagt
       61 tgaaatgcag cagtccaaag aacaggcgac aatggccaga ggcttggctt ggttgactgc
      121 tggaaatatt cttagtcgcc tgcttggtgt tgcctatgtt attccctggt atatttggtt
      181 aggggaatat cgagctgaag ccaatgctct ctttagtatg gggtatcaaa tctatgccaa
      241 cttcttattg atttcaacag ctggtcttcc gacagctatt gccaaacaag tagctaaata
      301 caatgtcttg ggtaaagaag aggtatcgct ttacttggtc agagaattct tcaagctcat
      361 gttggtcttt ggagctgtct ttgcaggggt catgtatcta agtgctccgt ggttggcaga
      421 cgcatcgggg tcgaaggaaa agttacttcc agtcatgtat agtctagtcc cgcctctctt
      481 tatcttccca gccatgagta tcttgcgtgg ttttttccaa ggtcggcacg atatgaagcc
      541 ctatgcgatc agccagcttg cagagcagct ggtacgggtt atctggatac tggcagcaac
      601 atttatgatt atgaagttgg gtagcggtga ctatcttgaa gcagttgtcc aatctacctt
      661 tgcagctttt atcgggatga ttgctagtgt tgggatttta gtttatactt tatggaagca
      721 aggctacctt ggtaagttgc ttcatgctaa gaaacaaaag atttctttgg atacaggtca
      781 acttattaag gaaactgttc gagatgcgat tccaattatc attttaggtc taacgattca
      841 attattgcag tttattgacc aagtcacctt tattcgtgtt atggaaagaa ttacggatta
      901 cagtaattcg gaacttttgg aactttattc atatatggct gccaatccaa gtaagattac
      961 gatgatgatt atcgggattt cactgagttt gggaagtgtt gctattccat tgattacaga
     1021 gaaatttgtc aagaaagatt tgaaggcggc gtctcattta gtggcggata atctacaatt
     1081 actctttata ttcacaatac cggcaattgt tggaacagtc ctgttagctg ggccactcta
     1141 tacgattttt tacggaccgt cagagcctat cgccattact ctatttattt ggaacttatt
     1201 tttgatttta cctctgggac tatattctgt cattagtgtg gtcattcaag cgatatttga
     1261 aaatagaaga gccatttatt atttcttgat tgggatgcta gtgaaaatcg ttttacaagt
     1321 accaatgatc tatgtcttta aggtatatgg tagctttatc tcaacgatat ttgggttggg
     1381 acttatgctg tatctcttct atagacgaat tgacaaggtt ctgcatattg atgaaagact
     1441 agtgataaaa gatattgcga ccattagttg gatttctatc gtaatgggac tcgttgtatg
     1501 ggggattgaa tttgtcttga atcttatcct tccagcaaat ggctatgtat ctagcttcat
     1561 ccacttggct gttgcaggtg gagcaggtat gcttgtcttt gtcatcttga cattgaagac
     1621 tcgtcagcta gatcgtttaa ttggaagtcg ggctcagagt ttacggagga aattgcgcct
     1681 aggctagttt gttttaaaaa tctctatttt ctactattga aaagctggga aaaagaggcg
     1741 ttttagaatg tgagaaggaa agttcgttga ggattttcct tttttcttgg agatttcagt
     1801 ataaaaaaaa cggtttttgt ggtagaatag tagggataaa aaagaggaga gagatgatga
     1861 aacctaaata cgaacgtatt ctaatcaaac tatctggtga agccttggct ggtgaacgtg
     1921 gtgtcggtat tgaccttaaa actgttcagg aaatggcaaa ggaaattcag gaagtcgcag
     1981 aatcaggtat tcagattgcc cttgttattg gtggtggtaa cctttggcgt ggagaacctg
     2041 ctgctgaagc gggtatggat cgagttcaag cagactatac aggcatgttg gggactgtta
     2101 tgaatgctct tgtaatggct gattccctta aacagcttgg tgtggataca cgtgtgcaga
     2161 cagcgattgc gatgcagtca gttgcagagc cttatattcg tggtcgtgct cttcgtcatc
     2221 ttgaaaaagg tcgcattgtt atttttggag ctggtattgg ttctccgtac ttctcaacgg
     2281 atacgacagc ggctcttcgt gctgcagaaa ttgaagcaga tgcgattttg atggctaaaa
     2341 atggtgtgga tggcgtctac aatgctgatc cgaagaaaga tgctaatgca gttaaattca
     2401 atgaattgac ccaccgtgaa gtgattagtc gaggtttgaa aatcatggat gcgacagcat
     2461 caactctctc aatggacaat gatattgatt tggtcgtgtt caatatgaat gaaccaggaa
     2521 atattaaacg tgttgtcttc ggtgagccaa tcggtactac cgtttcaaat tcttcagaag
     2581 aaaaataaat catatcgtca tttagttttt cttttattac ttcgttaatt cgccttgcct
     2641 aacttcggtt atgcctgtgg ctcgttgcct agtgctaaaa gtaaactaaa agaatgtaaa
     2701 aaaatacaaa gaaggaagtc ttatgtctaa agaaattatt gctaaagcgc aagagcgcat
     2761 gaaccaatct catcagagtt tggcacgtga attcagccac attcgtgctg gccgtgccaa
     2821 tgctagtttg ttggaccgta tttcagttga gtactacggt tctccaacgc cattgaacca
     2881 gttggctggt attacagtgc cagaagcgcg tgttcttttg attactccgt ttgataagtc
     2941 aatcttgaag gatattgagc gtgctttgaa cgcttcagat cttggtttga cacctcaatc
     3001 tgacggtact gttatccgtt tggttattcc tgcccttaca gaggaaactc gtaagaactt
     3061 ggcgaaggat gtgaaaaaag tcggtgaaaa ttcaaaagtt gccatccgta atatccgtcg
     3121 tgatgccatg gatgaagcta aaaaagctga aaaagcaaaa gaaatcacag aagacgagtt
     3181 gaagacgctt gaaaaagata ttcaaaaagt aacagatgat gctatcaaga caattgataa
     3241 aatgactgcc gacaaagaaa aagaattgtt ggaagtttaa tcaacacgtt tttaggctac
     3301 aaaaatagat catcactggg ctgtctaact tccagtggtg aaccaataag aaatctaatg
     3361 gggggagtta gacaagactt cccccacttt ttaatcagaa agaagaaaat catgaatgat
     3421 ttattagcac agtatatcgt tggtttagtg actgacgaaa acgatcagtt ttactttgtc
     3481 caaaaagagg gtagaacctt tgctctttct aaggatgaag gagaacatag tctaggtcaa
     3541 tctgttaagg gatttaccta tatggatatg aaacaaaaac tccgtttgac aactaaggaa
     3601 gttggggcga gtcgtaccag ctttggttgg ggaactgtca cagaggtacg taaggatttg
     3661 ggtgtctttg tggatacagg tctgccagac aagcaagtgg ttgtttcctt ggacattttg
     3721 cctgaaatca aggaactctg gccgaaaaaa ggggatcagt tgtacgtcaa attagacgtc
     3781 gataagaagg accgcatttg ggctctgcca gcttttcagg aagattttca gaaaatggct
     3841 ggacctgctt atgacaatat gcaaaaccaa aatctgcgag cgattgtcta tcgtttgaaa
     3901 atgaatggta cttttgttta tttgccagac aacaacatgc ttggttttat ccacccgagc
     3961 gaacgctttg cggaaccgcg tttaggtcag gttttggagg cgcgtgtcat cggctaccgt
     4021 gcagttgatc ggaccttgaa cttgtctctc aagccacgtt catttgagat gctggaaaat
     4081 gatgcccaga tgatattgac ttatctggaa agcaatggag gtttcatgac cttgaacgat
     4141 aagtctgctc cggaagacat caaggccacc tttggtattt ccaaagggca attcaaaaaa
     4201 gctcttggtg gtttgatgaa ggctggaaaa attaaacagg attcttttgg aacagaattg
     4261 gtctaggggg cgtctatgct agtgtatatt gctggaagtg gggcaatggg ttgtcgtttt
     4321 ggttatcaat tgtctaagac aaatcatgaa gtgattttgc tggataattg ggaagaacat
     4381 atcgaggtaa ttcgagaaaa cggcttgaaa gtgactggag acgtagagga aactgtatac
     4441 ttacccatca tgaaaccgac cgaagcaatg agagaagcag attttatcat tctattgaca
     4501 aaggctgatc agttgccaaa gatgttgcgg gatattaaac cgattatcgg tccaactacc
     4561 aaggttttga gtctcttgaa tggtttgggg catgcgacga ccatgcgtcg gtatgtacca
     4621 gatgaaagta tcatggttgg ggtgaccatg tggttggcgg aactaaaggg tcctggacat
     4681 gctcacttag aaggtccggg ttctatgtcc gttcagcata ttcttggtga tgagcaatca
     4741 gttgcggata ttattgaaat gctgaatgaa gctgggctga atgtgaccta tgacaatcat
     4801 gttgtcagtg ccatttggca gaaagcctgt gtcaatggtg tgatgaatcc aacttgtacc
     4861 attttagact gtacaattgg tgaattattt ggtacggagg ctggactgaa tctagtacag
     4921 gggattttca aagaatttat tgctgttgct aagtctgagg cagatggaat tgacgaagaa
     4981 gctatttgga aatatgttat tgatgcttcg aagaaagctt ccaatcacta tccatctatg
     5041 caccaggatt tggtccaaca tggtcgaaag acagaaattg attatctgaa tggagcggtt
     5101 gtttttaagg gcaaacgtgc aggtatccct acgccatact gtcagatgat aacagatatg
     5161 attcatgcca aagagagtat gttggggttg agataggaga aagtcatgct gattggagtg
     5221 gaaacgattg aagaatatat ggctgccttg cctaaaaatc ggaaagaagc agttgaacga
     5281 ctccatcaag tgattgtgga acagttacca gctggttttg aagtaggcat cttgggaggt
     5341 atgattaact attatgtgcc gcttactgcc taccctgatg gttatcattg cacaccggga
     5401 gagcccctgc ctttccttgc cttggcatca caaaaggcac acatcgccct ctaccacatg
     5461 ggaatttata tggaccaaga attaaatgat tggttcgttg ctgcttatca agcacaggtg
     5521 cctaccaaac tggatatggg caagtcctgt attcgtatga aaaatcccaa gaatattcct
     5581 tatgaattga taggggaatt ggttagtaag atgtctatgg agcgctatat agagctctac
     5641 gaaaaaaatc atagaaagta gatgtagtga gaagaagttt ttattcttgg ttgatgaccc
     5701 agcgcaaccc gaaaagtaat gaaccagtag ctatcttggc agattatgcc tttgatgaat
     5761 ctgattttcc taagcaatca gataattttg atgaagtcag tcgttttttg gaggaatcgg
     5821 ccagttttgc cttttccatg tctgattttg atgcgatttg ggaagattat ttgggacatt
     5881 gatgacaaaa gaagataaag caaatacata tttgtatttt gctttttttt atttgtatga
     5941 atagcgccga taaatgatgg aagaattgtt cgttttttga tataatgaca ggagaaggta
     6001 gcatttgatg caagagaaat gaaaggagat catatgcaca aattttttta cgaacagagg
     6061 aaagcgtttt cttttagaaa gctgaccatc ggtcttgttt ccctgtgtgt gggtactagc
     6121 ctactatttg gtatccagtc ccaagaagtt tcagcttcga cagtaagtcc tagccagatt
     6181 cgtttcgaat atgttttaga ggcggaatta tcggcagagg agcgacagtt gattcagtct
     6241 agcctaccag ctgaattgaa ggaagaagcg acctattttg tagtttatcg tccctctaag
     6301 aaagttcttc ctgcaacggg tgagctagct ggttcaggtt tggctgtcct aggactaggt
     6361 ttcttggttt tagctgtttc tgcgaccaag tctaagaagg cgcgtgtctt gaccatgctt
     6421 tatgtgacaa ctagtggtct ggctctacct attttggaag taggagcagt tcaaagttca
     6481 gcactggctg cttacaatca gaccctcacc attcgtccag gggattcctt gccggatggg
     6541 aagttgcgat tggatggcta tgagtttgtg gggtatttca ttgaagaaaa gccagaggtg
     6601 aagagtcagg ctagggatga gaaaacaagt ttgtccactt ctaatcagct ggaggagtca
     6661 aagaccagtc cagaaactgc agaagtagac aagcaaatct caactgggga agtaagtggc
     6721 aaaccagacc aagcaagcca accgatagtt gagcaagctg ataaaactga acaaactggt
     6781 aaagctgagg aaagtcagga ccaagcag
//
LOCUS       DASFQS010000103         6783 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.107, whole genome shotgun sequence.
ACCESSION   DASFQS010000103 DASFQS010000000
VERSION     DASFQS010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6783
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.107"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(264..611)
                     /locus_tag="U1041_001912"
                     /pseudo
     CDS             complement(264..611)
                     /locus_tag="U1041_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935801.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            922..2184
                     /gene="purD"
                     /locus_tag="U1041_001913"
     CDS             922..2184
                     /gene="purD"
                     /locus_tag="U1041_001913"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009660198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEM4769001.1"
                     /translation="MKLLVVGSGGREHAIAKKLLDSEQVEQVFVAPGNDGMTLDGIKL
                     VNIGISEHSALINFAKEHDIAWTLVGPDDALAAGIVDDFEQAGLKAFGPSRLAAELEW
                     SKDFAKQIMVKYGIPTAAFGTFSNFEEAKAYIEEQGAPIVVKADGLALGKGVVVAETV
                     EQALEASREMLLDNKFGDSGARVVIEEFLAGEEFSLFALVNGDQFYILPTAQDHKRAF
                     DGDQGPNTGGMGAYAPVPHLPQSVVNTAVDTIVKPILEGMIAEGRSYLGVLYAGLILT
                     EQGPKVIEFNARFGDPETQIILPRLTSDFAQNIDDILHKRPTQLTWLDSGVTLGVVVA
                     SNGYPLDYEKGVTLPAKTEGDITTYYAGARFADNSRALLSNGGRVYMLVTTADTVQDA
                     QEKIYSELKNQDTTGLFYRTDIGSKAVK"
     gene            2210..2698
                     /gene="purE"
                     /locus_tag="U1041_001914"
     CDS             2210..2698
                     /gene="purE"
                     /locus_tag="U1041_001914"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEM4769002.1"
                     /translation="MNIPISIIMGSSSDWKTMKKAADVLDKFGVAYEKKVVSAHRTPD
                     LMFRHAEEARGRGIKVIIAGAGGAAHLPGMVAAKTTLPVIGVPVQSRALSGVDSLYSI
                     VQMPGGVPVATMAIGEAGATNAALTALRILSIEDENIAAQLTDFAKEQENIAEAMTDD
                     LI"
     gene            2685..3758
                     /gene="purK"
                     /locus_tag="U1041_001915"
     CDS             2685..3758
                     /gene="purK"
                     /locus_tag="U1041_001915"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEM4769003.1"
                     /translation="MISSKTIGIIGGGQLGQMMAISAIYMGHKVITLDPAADCPASKV
                     SEVIVAPYHDVAALKQLAERCDILTYEFENVDADGLDAVIKDGQLPQGTDLLRISQNR
                     IFEKDFLAKKAGVQVAPYKVVTSSLDLEGLDLSKNYVLKTATGGYDGHGQKVIREAAD
                     LVEASQLANSAECVLEEFVNFDLEISVLVSGNGSDYTVFPVQENIHRNNILYKTIVPA
                     RISDELAEKAKTMALQIADKLHLAGTLCVEMFVAGQEILVNEIAPRPHNSGHYSIEAC
                     DFSQFDTHIRGILGEPLPSIRLLSPAVMINVLGQDMEAVQTFLQENPTAHPHFYGKLE
                     AKHNRKMGHVTVLTEDVDGVEEF"
     gene            3868..4731
                     /locus_tag="U1041_001916"
     CDS             3868..4731
                     /locus_tag="U1041_001916"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769004.1"
                     /translation="MEMDFFNTNNNTLKTDSLEINNNILAMRNNTIQINNISMMSNSE
                     LKFQVTIREIVAILFFFSLLFIDFIPKIIPMIVLAVLGYNIYQRYQKHLKDKYFIEFN
                     LGSSKNYYLFFEDKNFRDEVSDVIKKSFNLKGQTTYIDIKNQNINSGSGTQEVIEDKT
                     VHETNIAGNDNIVGTNFGQGNTISIKGDAVSNSNITENAKISNSNLETNKSLPWEAVT
                     ADLNRLINEKAFSDELRNVFSELLDASKEKNFDNFNSVVKENEKWFDNSFVKDVMSST
                     LSNIISGILLM"
     gene            5011..6303
                     /gene="purB"
                     /locus_tag="U1041_001917"
     CDS             5011..6303
                     /gene="purB"
                     /locus_tag="U1041_001917"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEM4769005.1"
                     /translation="MINRYSRPEMAAIWSEENKYKAWLEVEILADEAWAELGEIPKED
                     VALIREKATFDIDRILEIEEETRHDVVAFTRAVSESLGEERKWVHYGLTSTDVVDTAY
                     GYLYKQANDIIRRDLENFTNIIADKAREHKYTIMMGRTHGVHAEPTTFGLKLATWYSE
                     MKRNMERFDVAAKGVEAGKISGAVGNFANIPPFVEEYVCGKLGIRPQEISTQVLPRDL
                     HAEYFSALALIATSIERMATEIRGLQKSEQREVEEYFAKGQKGSSAMPHKRNPIGSEN
                     MTGLARVVRGHLVTAFENVALWHERDISHSSAERIITPDTTILINYMLNRFGNIVKNL
                     TVFPENMKRNMESTFGLIYSQRVMLSLIEKGMTREEAYDLVQPKTAQSWDNQVDFKPL
                     LEADERVTAKLSQEEIDELFNPDYYAKRVDDIFERLGL"
BASE COUNT         1987 a         1397 c         1585 g         1814 t
ORIGIN      
        1 cacctagaaa taaaaaagca ttgagttatg cctgcgactg ttgaagcgaa cttggttcgc
       61 actatctcca gccttcagag gatcccccaa atctttgaag cgagtactaa aagtaaatta
      121 aaagactata aatatgacaa aagcggctgt tccagtcacg accttgtccc tacttgttta
      181 ggagggataa ggtcgttttt tatacagcgg acagttttga agaatccata ggctagctat
      241 tctcgataca ctgcgaatac ctaaagtaga ccaatccgtg tccatttggc tatccagtga
      301 gcatccttct tgtcggtttt ctgacctgga atagccttca tgtgtgctgg ttgagcgagt
      361 atcaacttga agtcatcaca gagagcgtgc cagacaggtc gccaataaat acctgtgctt
      421 tccataccaa cagcttccac acgaaattga ccgagaaaat tgtggcaagc acgtaggact
      481 ttagtcgttg tatcaaatgt agccatctca cgctttggac gagttgaggt gagtggtcca
      541 tgtaggatac agacgacaat attggcttga tggacatcaa tacctgcaca agattgatag
      601 agaacatcca tgacaattcc ctccttctaa aaattagaga gcttatctac cgaattttag
      661 tcgtattttt atactcatgc ctatcgcata ttttggggtg ctcgtcagta gagtggatca
      721 gtttttccct cgatgactaa catcattaac tcgtcaacca caaaaattat aagaaatatg
      781 taccgcctaa cgaaggtgaa gccatcatgg ctgtcttgcc cagcctcttt tccattcccg
      841 aacattaccc ggctttttct attaaaatcc gtctgttttt gctatactgt ttatataaaa
      901 tccgtttttg aggtgtgaaa aatgaaactt ttggttgtcg ggtctggtgg tcgtgaacat
      961 gctattgcaa agaaattgtt agattctgag caggtagagc aggtttttgt agctcccggt
     1021 aatgacggaa tgaccttgga tggtatcaag ttagtcaata tcgggatttc cgaacattct
     1081 gctttgatta actttgctaa ggaacatgat attgcttgga ctttagttgg tccagacgat
     1141 gctctggcag cgggaatcgt tgatgatttt gaacaggcgg gactaaaagc ctttggtcct
     1201 agtcgtctag ccgcggagct ggagtggtca aaagactttg ccaagcaaat tatggtcaaa
     1261 tacggcattc caacagcagc ctttggcaca ttttccaact tcgaagaagc caaagcctac
     1321 atcgaagagc agggggcacc aatcgtggtc aaggcggacg gcttggcact gggcaagggc
     1381 gtggtcgtgg cggaaaccgt cgagcaggcg ctcgaagcgt cacgggagat gctcttggac
     1441 aacaagttcg gcgactcggg tgcccgcgtg gtcatcgagg agttcttggc gggcgaggag
     1501 ttttccctct ttgccctggt caatggcgat cagttttaca ttctgccgac agctcaggac
     1561 cacaagcgtg cctttgacgg cgaccaaggt cccaacacag gcggcatggg ggcttacgca
     1621 cctgttcccc acctacctca aagcgtggtg aacacagcgg ttgacaccat tgtcaagcct
     1681 atccttgagg gcatgattgc ggaagggcgg tcttatctgg gcgtgctcta tgctggtttg
     1741 attctgacag agcaaggtcc caaggtcatc gagttcaacg ctcgatttgg cgacccagaa
     1801 actcagatta tcctacctcg cttgacctct gactttgctc agaacattga cgacatcctc
     1861 cacaaacgcc cgacacagct gacttggctg gatagcggcg tgacgctagg cgtggtcgtg
     1921 gcttcaaacg gctaccctct ggactacgaa aaaggcgtaa ccttgccagc gaagactgag
     1981 ggcgacatca cgacttacta tgcaggggct cgttttgcgg acaatagcag agcactgctc
     2041 tcaaacggcg gtcgggtcta tatgctagtc accacagcag ataccgtcca agacgcccaa
     2101 gaaaaaattt actcggagct gaaaaatcag gatacaacag gcctctttta tcggacagat
     2161 attgggagta aagcagtaaa ataagggata aagaaaagga aagacaagta tgaacattcc
     2221 aatttccatc atcatggggt ctagttccga ctggaaaacc atgaaaaaag cagccgatgt
     2281 gctggacaaa tttggcgtag cctacgaaaa gaaagtggtc tctgcccacc gcaccccaga
     2341 cctcatgttc cgtcacgccg aggaagcgcg tggtcgtggc atcaaggtta ttatcgcagg
     2401 agcgggtggt gcggctcatt tgccaggtat ggtggcagct aagacaacct tgcctgttat
     2461 cggtgtccct gtccaatctc gtgccctcag cggtgtggat tcgctctatt ctattgtgca
     2521 gatgccgggc ggcgtgcctg ttgcgactat ggcgatcggc gaagcaggtg ccaccaacgc
     2581 agccttgacc gctcttcgca ttctctccat tgaggatgaa aacattgcag ctcagctgac
     2641 agactttgcc aaggaacaag aaaacattgc ggaggcgatg acagatgatc tcatctaaga
     2701 caatcggaat tatcggcggc ggtcagctgg ggcagatgat ggctatttcc gccatttaca
     2761 tggggcacaa ggtgatcacg ctggatcccg cggcggactg cccagcctcc aaggtcagcg
     2821 aggttatcgt cgctccctat cacgatgtgg cggccctcaa acagttggcg gagcggtgcg
     2881 atatcttgac ctacgagttt gaaaatgtcg atgccgacgg actggacgcg gtcatcaagg
     2941 acggccagct ccctcagggg acagacctcc ttcgcatttc ccagaaccgc atttttgaga
     3001 aggatttttt ggcaaaaaaa gctggcgtgc aagtcgcccc ctacaaagtc gtcacttcta
     3061 gcctagacct agaaggtctg gatctcagca aaaactacgt cttgaagaca gccacggggg
     3121 gctatgatgg acatggccag aaggttattc gtgaagcggc ggacttggta gaggctagtc
     3181 agctagccaa ctctgccgag tgtgttttgg aagagtttgt gaattttgac ctggaaatct
     3241 ccgtccttgt gtctggtaat ggctccgact acaccgtctt tcctgtacag gaaaatatcc
     3301 accgcaataa tattctttac aagaccattg tgcctgcccg tatttcagat gaactagctg
     3361 agaaagccaa aaccatggcc ctgcaaatcg cagataagct ccatttggca ggcaccctct
     3421 gtgttgaaat gtttgtggca gggcaagaaa ttcttgtgaa tgaaattgcc cctcgtcctc
     3481 ataattcagg gcattattct attgaagcct gtgatttttc acagtttgac acccatattc
     3541 gaggcattct aggggagcct ctgccctcta tccgcctgct ttctccagcc gtcatgatta
     3601 acgtcctcgg acaagatatg gaagcagtcc aaacctttct tcaagaaaat cctaccgccc
     3661 atccccactt ttatggtaaa ctagaagcaa agcacaatcg caaaatggga cacgtgacgg
     3721 tgttgacgga agatgttgat ggtgtggagg agttttagga aggagtagaa cttagtaatt
     3781 aagtgcgacc gtgcactaat tgataatggg gaagaaaagc acttgctttt aaatattata
     3841 tagattattt ataaaggatg aaaataaatg gaaatggatt tttttaatac taacaacaac
     3901 actttaaaaa cggatagttt agaaataaac aacaatattc tggcaatgag aaataacact
     3961 attcaaataa ataacatttc tatgatgagt aattcggaat tgaagtttca agttacaatt
     4021 agagaaatag tggctatttt attcttcttc tctcttctgt ttatagattt cataccaaag
     4081 attataccaa tgattgtttt agctgtgtta ggatataaca tttatcagag atatcaaaag
     4141 catttaaaag ataagtattt cattgaattt aatcttgggt caagtaagaa ttattattta
     4201 ttttttgaag acaaaaattt tagggatgaa gtttcggatg taataaagaa gtcgtttaat
     4261 cttaaggggc agacgactta tattgacata aaaaaccaaa atatcaacag cggttcgggt
     4321 actcaagaag taatagaaga taaaacggta catgaaacta atattgctgg aaacgataac
     4381 attgttggta ctaattttgg acaagggaat acgatctcaa tcaagggtga tgcagtatct
     4441 aattccaaca ttactgagaa tgcaaagata tccaattcta atttagaaac taacaaaagt
     4501 ttgccctggg aagcagtaac agctgattta aatcgtctaa tcaatgaaaa ggctttttca
     4561 gatgaactaa gaaatgtttt ttcagaattg ctagacgcta gtaaagaaaa gaactttgat
     4621 aactttaatt cagttgtcaa agaaaatgaa aaatggtttg ataactcttt tgtaaaggat
     4681 gtcatgtcat ctactttatc taatataatt tcaggaatac ttttgatgta aatcaaaagg
     4741 gtaaaaactt aaaagatgtt ataaatataa agaaattttt gctagtcttt tcataagtat
     4801 taaacgaaaa ttatgaggag cttgtcttta taacggcttg gcaaagttga ataataaaaa
     4861 agaatctaga gttatttata tatagacaac gacctagatt ttgataacaa caatcattac
     4921 ggttatttca ttaatcggac tatagaaaaa gttgttgtct tgaaaaggtg tttaagaatc
     4981 ataagtaaga taagaggtag agaactaagt atgatcaatc gttattcccg cccagagatg
     5041 gcggctattt ggagtgaaga gaacaagtac aaggcttggt tggaggtgga aatcctcgct
     5101 gatgaggctt gggctgagtt gggtgagatt cccaaagaag atgtggcctt aattcgtgag
     5161 aaggcgactt ttgacatcga ccgcatttta gagattgaag aggaaacccg tcacgatgtg
     5221 gtggctttca cccgtgcggt ttcggaaagt cttggtgagg aacgcaagtg ggtccactat
     5281 ggtctgacat caaccgacgt ggtggatacg gcttacggct atctctacaa gcaggctaac
     5341 gacatcatcc gtcgtgacct tgaaaacttc accaatatca tcgctgacaa ggcacgtgag
     5401 cacaagtata ccatcatgat ggggcggact cacggtgtcc atgcggagcc aacgaccttc
     5461 ggtcttaaat tagcgacttg gtatagcgaa atgaaacgca acatggagcg tttcgatgta
     5521 gcggccaagg gtgtcgaagc tggtaaaatt tcaggtgcgg ttggaaactt tgccaacatt
     5581 cctccatttg tggaagagta tgtttgtggt aaattgggca ttcgtccgca ggaaatttcg
     5641 actcaggtcc ttcctcgtga ccttcacgca gaatatttct cagctctagc cttgattgca
     5701 acgtctatcg agcgtatggc gacagagatc cgtgggctac aaaaatctga acaacgcgaa
     5761 gtcgaagagt atttcgccaa aggccaaaag ggcagctctg ctatgcccca taaacgcaac
     5821 cctatcggct ctgaaaatat gacgggtctg gctcgtgtgg tgcgtggtca cttggtgacg
     5881 gcttttgaga atgtggctct ctggcacgaa cgcgatatct cccactcgtc agcggagcgg
     5941 attatcacgc cggatacgac cattctcatc aactatatgc tcaaccgttt tggcaatatc
     6001 gtcaagaact tgacggtctt ccctgaaaat atgaaacgca atatggagtc gacttttggc
     6061 ttgatttaca gccagcgtgt catgcttagc ttgattgaaa aaggtatgac ccgtgaggaa
     6121 gcctatgatt tggtgcaacc aaaaactgcg cagtcatggg ataatcaagt ggacttcaag
     6181 cctcttcttg aagcggatga gcgcgtgaca gctaaactta gccaggaaga aatcgatgaa
     6241 ctcttcaacc cagactacta tgctaagcgg gtggatgaca tctttgaacg acttgggtta
     6301 taaaaaaatc aaaattcttt ggattttcca gagaattttt ttatttattt gcgaataaat
     6361 agttgaaggg gaaaacaagc tcacaactta ttcaaaaaaa gtatcgtcat ttagcttttc
     6421 ttttattact tcgttaactt gccttgccta actctagtta tgcctgcgga tcgttgccta
     6481 gtactaaaag taaactaaaa gactataaaa aattttttca aaaaatgcaa acgatttgcg
     6541 aataagtaag tgagagggaa aattcccctc aaggagatac acacttgaaa aaaataaatc
     6601 attttcaaaa tgatttacga ataaacaagt gtaggaaaaa tgaaaggaga agaaggatga
     6661 aaaagaagtt caagattgta aacaaacgta caacgattga cctcgggatt attaagtata
     6721 gctaccgtcg tggtcgccat actttgtaaa cagggtaata aattatattt tttgtaaatt
     6781 ttt
//
LOCUS       DASFQS010000104         6747 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.108, whole genome shotgun sequence.
ACCESSION   DASFQS010000104 DASFQS010000000
VERSION     DASFQS010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6747
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.108"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            161..1297
                     /locus_tag="U1041_001918"
     CDS             161..1297
                     /locus_tag="U1041_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003092450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEM4769006.1"
                     /translation="MKKRPTSAYIHIPFCTQICYYCDFSKVFIKNQPVDEYLAALMEE
                     VKFYDLPALRTLYIGGGTPSALSAEQLDYLLTNLEDLLDLSQLEEFTIEANPGDLTAD
                     KIAVLKKSKCNRVSLGVQTFDDRMLKKIGRSHNQSQIYETIAALKEAGFHNISIDLIY
                     ALPGQTMEQVVDNVAKALELDIPHMSLYSLILENHTVFMNRQRRGNLHLPNEDVESDM
                     FDYILQELEKNGFEHYEISNFTKPGFESRHNLMYWDNSEYYGLGAGASGYIDGMRYRN
                     RGPIQHYLKSIREKGHSRLHEEFLSKTEQMEEEMFLGLRKKTGVSIERFEEKFGISFE
                     DRYGQVVRDLKNEGLLQEEDRWLRMTKKGLFLGDTVAERFIIED"
     gene            1310..2050
                     /locus_tag="U1041_001919"
     CDS             1310..2050
                     /locus_tag="U1041_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein] thioesterase"
                     /protein_id="HEM4769007.1"
                     /translation="MGLSYQEEFTIPFDMVDVKQEIKLPDFISYCLGLSGRQSEELGR
                     SDLYVFQEFGLIWVVTDYELTIQSLPKYNETITIKTEAVAYNKFFCHRMFYIYDAAGN
                     LLLDILCYFVLIDFETRKVAPVPEDLIAPYQSEQVKKLPRAPKYQLLENPSVQEFPVR
                     YFDLDMNGHVNNGKYLEWMYEALGYDFLLCHVPKKIQLKYLKEVEATSLVSSRMVAEA
                     GVSQHEIVVDGHIHAQAVIEWRECHGAG"
     gene            2037..2195
                     /locus_tag="U1041_001920"
                     /pseudo
     CDS             2037..2195
                     /locus_tag="U1041_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910379.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase N-terminal domain-containing
                     protein"
     gene            2633..3538
                     /locus_tag="U1041_001921"
     CDS             2633..3538
                     /locus_tag="U1041_001921"
                     /inference="COORDINATES: protein motif:HMM:NF012745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4769008.1"
                     /translation="MTEKTQPSVTVLIPVYNGEEHIGDCLDSLLKQSYDNYQIVVVND
                     GSRDKTLEKLQQYPVKILSYEENKGISYALNYGIDHIDTDYIIRMDADDLAHYDRIRI
                     QVNFMENNPRIFMSGCTSYPGPVHGNKWEVAFGERRLTTFNELRTFYLFHPYLLHPGV
                     IFRTKSWKEKGYRYDSRFDGVEDFELHRRIIMEEEVYLLHLHLIHVRAREGSASSVPQ
                     SVTLERLNRANRHFYQSHGVPYEGDMLYLGKTMFPTTYSTSRAELEKAENFACQLLEV
                     DYFKQRLKRDIIKPLFAYLYQIARE"
     gene            3592..>6747
                     /locus_tag="U1041_001922"
     CDS             3592..>6747
                     /locus_tag="U1041_001922"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4769009.1"
                     /translation="MLDKKKINFRRKRMTTPDKRYRYSIRKFNVGIASVAIAAFMFLG
                     NGAVSVSANDLASNEEAIPTSGPVSEEDLSSSAEIKESELVPSSTPNTGTPAETPAQT
                     EKVVAEETVPVTENADSLPTNESQQESLSTKESDDALAAAKKVLEQVISEAEVLSADA
                     LRKAAKSTADTSSLQSAANATKAAAEAANQVFADEHASLEDINAQITAIRTAVGNLGS
                     ELTSFTGTEEVTVMLAATISGVADANQSGIDEISERTGQYTAISVTTQNFKWEDMEPS
                     PIIALKKTDGTYKYKKFSGPVTVDIAKAAQRAGQFVDAAAYKTANGPLQAGDKVYIIQ
                     ESDFTSAPTSIEESYDLMKFHHRQNLIFSGWSIYPGVTIDELAEAGAADNVLVALARP
                     GSFVSEIEFEDPWLNVGKKYLPKENNTLLVVDSIGEALRQEDQSYKNFGLFLSYIDVN
                     DDKVNKPNTVMELPEGVEVVFADSSGQQTTFAGAMYDMMAKLEYNDEWKVLNPQQKLK
                     FKFIVKKDGQIIQQDADWREITLHVYNDVDAVKGMVKTTLTNTRNNFEAGIVDNIDFS
                     GLPEEMKKEAIEMEKTYRNVDGTLPQDGEMPHFSNPGDKHYDWINKDGEGSDGTHATS
                     PARYFPYDMDLFQGDGAEVDKHLKGYIPYIQGYKNERDYDDIGIDPSEHDKELIDYYS
                     LGPIFTRTMFGRSMTPEPGGVNESYWHSLTQAMPIPQLDFEPEVNLDIVTLSDNPQPN
                     PKGTVKIVYKALNADGTDVDSSVVLRADVTDTEDAAVGTPWNAKETGVDHDKDTATDS
                     IDERPETFTTQATETNPSREYKLVSAKTTVQTPTDAAPVTVTDDAQLEGQVIEGTTTV
                     TYYYALVQEQPATSREVKGDVIIKYEDTAGTEIKGQLKDTDQGVVATYTTPSRRYIKV
                     DNQVTYLDSEPAETVELSNLAYNADQTREDGTVEKPATIESAGKTYRFIKLKDDSATV
                     TGLVTEATKTVTYVYAPEQTRQVPTPSTGSVIVEYKLEGSETPEKPEGEKLQADFNDT
                     TDQLVSTSTVTETYYVDENGEE"
BASE COUNT         2066 a         1352 c         1589 g         1740 t
ORIGIN      
        1 actagctttt ctcgaaaagt tgagcacaga tggatatctc ttggtaagtc atccatctgt
       61 acagttcaaa ataaaaagga tctaaggtca ttagacttta ggtccttttg ttgttttgct
      121 aaaaacataa aaagtctaat agtgtgctat aatagttggt atgaaaaaac gaccgacatc
      181 tgcctatatc cacattccat tttgtaccca gatttgttac tactgtgact tttccaaggt
      241 ttttattaag aaccagcctg ttgacgagta tttggcagcc ctcatggaag aggtcaagtt
      301 ttatgacctg ccagccctcc gcacacttta tatcggaggc ggaacaccgt cggctctctc
      361 ggcagaacag ttggactacc ttttgaccaa tctggaggac ttgctggact tgtcacagct
      421 ggaagagttc actatcgagg ccaatccagg tgacttgacg gcagacaaga ttgcagttct
      481 aaaaaaatcc aagtgcaatc gggtgtcgct gggtgttcaa acctttgatg accgtatgtt
      541 gaaaaaaatc ggtcgtagcc acaaccaatc ccagatttat gaaaccattg ctgccctcaa
      601 ggaagcgggt ttccacaaca tttccatcga cctgatttat gcccttcctg gtcagactat
      661 ggaacaggtg gttgataatg tcgccaaggc cttggagctg gacattcccc acatgagcct
      721 ctatagcttg attttggaga accacacggt cttcatgaac cgccaacgcc gtggcaatct
      781 gcatctaccc aacgaagatg tggagtccga tatgtttgac tacattcttc aagagttgga
      841 gaaaaacggc tttgagcact acgagatttc caacttcacc aagcctggct ttgaaagccg
      901 ccacaacctc atgtactggg acaactccga gtactatggg ctaggagctg gagcatctgg
      961 ctacatcgac ggcatgcgct accgcaatcg cggccccatc cagcactacc tcaaatccat
     1021 ccgcgaaaaa ggccattctc gcctacacga agagtttctc agtaagactg agcagatgga
     1081 agaagagatg tttttagggc tacggaaaaa gactggcgtg tccatcgagc gattcgagga
     1141 aaagtttggc atttcctttg aagaccgcta cggtcaggtg gtcagagact tgaaaaatga
     1201 aggtctcttg caagaagaag accgttggct tcggatgacc aaaaaaggat tgtttcttgg
     1261 cgatacagtt gccgagcgtt tcattataga agattagaaa gaggacacaa tgggactaag
     1321 ctaccaagaa gaattcacca ttccctttga tatggtggat gttaaacaag aaatcaaact
     1381 gcctgacttt atttcctatt gtttggggct atcaggtcgg cagtcggaag aactaggtcg
     1441 cagtgacctc tatgtttttc aggagtttgg cttgatttgg gtcgtgacag attatgaatt
     1501 aactattcaa agcttgccca agtacaatga aactattacc attaagacag aagcggttgc
     1561 ctacaacaag tttttctgtc atcggatgtt ctacatctac gatgcagcag gcaatctctt
     1621 gctggatatt ctttgttatt ttgtcttgat tgattttgaa actcgcaagg tggctcctgt
     1681 gccagaagat ttgattgctc cttaccagtc tgaacaggtc aagaaattgc ctcgggctcc
     1741 caagtatcag ctcttggaaa atccatctgt acaagaattt cctgttcgct attttgactt
     1801 ggatatgaat gggcatgtca ataatggcaa gtatctggaa tggatgtatg aagcactagg
     1861 ctatgatttt ctgctctgcc atgtccctaa aaaaatccaa ctcaagtatc tcaaggaggt
     1921 agaggcgact agcttggtga gttcacgcat ggtggcagaa gctggtgtca gccagcatga
     1981 gattgtggta gatgggcata tccatgcgca agctgtcata gaatggaggg aatgtcatgg
     2041 cgcaggataa gtggttggaa tgggccgtag tttacaagcc ttggctcaga ctggtttgta
     2101 aagatgtcta tgatatggag cgtttcgaag aaatcagaca gattgcggcg gaaatgttga
     2161 tagagctgtc tgggcagctt gagaaagaaa gttaaataac caaggggcag tgcgcctctt
     2221 tttctatttg cgagctatct caaatccaaa aaaagaaaga acattttgta gttttttgaa
     2281 atatagtggt ttgaattagg aaaaggacaa ctttaagtta tagtgtcagt agcccattct
     2341 caaaatagtt ttagagttct caaattgata agtttagata tgccttattt ttaatacgta
     2401 tcgctatatt aagtgattat tattcctgaa aaaataaacg aatatttttc ataaaatgta
     2461 tgtttttact ggagttttta ttttaaatat gctaaagtta aattgtgtat acttttttta
     2521 cgaggtctta taatccttgt gaaaaaggga tattttataa aaaggatatc ctctgatata
     2581 tatatatata tatgctagtt atttattgtt ttaatggaga ggaggagatg ttttgacaga
     2641 gaaaactcaa ccatctgtaa cggtgcttat tcctgtttat aacggggagg aacacatcgg
     2701 agattgtttg gatagtctat tgaaacaaag ctatgataat tatcagatag tggttgttaa
     2761 cgatggtagt agagataaaa ctttagaaaa attgcaacaa tatcccgtga aaattctttc
     2821 ctacgaggag aacaagggaa tttcctatgc tctcaactat ggcattgacc atatcgatac
     2881 agattatatc atccgtatgg atgcagatga tttggctcat tatgaccgta ttcggataca
     2941 ggtcaacttt atggaaaata acccacggat ctttatgagt ggctgtacca gctatccagg
     3001 ccccgttcat ggcaacaagt gggaggtggc ttttggtgaa agacgcttga ccacctttaa
     3061 tgaattgagg acgttctatc tttttcatcc ctacctcctg caccctggcg tgatttttag
     3121 gacaaagagc tggaaggaga aagggtaccg ctatgactcc cgcttcgatg gggttgagga
     3181 ctttgagctt cacaggcgaa tcattatgga agaggaggtc tacttgcttc acctccatct
     3241 tatccatgtt cgagctagag agggcagtgc ttcgtcagtc cctcagtctg tcaccctcga
     3301 gcgactgaat cgggccaatc gccactttta ccagagccat ggagtgccct acgagggaga
     3361 tatgctctat ctgggcaaga ccatgttccc gactacctac tcgaccagta gagcagagct
     3421 agaaaaagca gagaactttg cctgccagct actggaggta gactatttca aacaacggct
     3481 gaagagggac atcatcaagc cactctttgc ctatctctat caaattgcta gagaataaga
     3541 tttacttgtc tcttcagacc attcaattaa gattcaaaag aggaaaataa aatgctagat
     3601 aagaaaaaaa taaattttcg tcgtaagcgg atgacgacac ctgataaacg ttaccgctac
     3661 tcgatccgta agtttaatgt gggcatcgct tctgtagcca tcgctgcctt catgttttta
     3721 ggcaacggtg cggtatctgt ttctgcaaat gatttggctt ctaacgagga agcaattcct
     3781 actagtggtc cagtaagtga ggaagatttg tcatcttccg ctgagataaa agaatcggag
     3841 ctagtgcctt cgtctacacc taatactgga actcctgcgg aaacacctgc acagacggaa
     3901 aaggttgttg cagaagagac agttccagtg accgagaatg cagattccct cccaacaaac
     3961 gaatcacagc aagaaagctt gagtacaaaa gaaagtgacg atgccttagc agcagccaag
     4021 aaagtccttg aacaagtcat ctcagaagcg gaagtcttgt cagccgatgc tcttcgcaaa
     4081 gcagctaagt caacagcaga cacaagctcg cttcaatcag cagctaatgc aaccaaagca
     4141 gcagcagaag cagccaacca agtctttgcg gatgaacatg ccagtcttga agatatcaat
     4201 gcccaaatca cagctatccg taccgcagta ggaaacttgg gttcagagct gacaagcttt
     4261 acaggaacgg aagaagtgac ggttatgcta gctgcaacga tatcaggggt agcagatgcc
     4321 aaccaaagcg gtatagatga gatttccgag cgtacgggac aatatacggc tatcagcgta
     4381 acaacgcaaa acttcaagtg ggaggatatg gaaccgagtc ctatcattgc actaaagaag
     4441 acggatggaa cctataagta taagaagttt agcggtccgg ttaccgtgga tatagcaaag
     4501 gcggcacaac gagcaggcca atttgtagat gctgcggcat acaaaacggc aaacggtcca
     4561 ttgcaggcag gcgataaagt atatattatt caggaatcgg actttacctc cgccccgacc
     4621 tctattgagg aaagctatga cctgatgaag ttccaccata gacaaaatct gatttttagt
     4681 gggtggagta tttatccggg ggttactatt gatgaactgg ctgaagctgg tgcggctgat
     4741 aatgtacttg tagcattggc acgaccgggc tcctttgtat cggagattga gtttgaagat
     4801 ccgtggctta atgtaggaaa aaaatatttg ccgaaagaaa ataatacttt gttggtggtg
     4861 gacagtatcg gtgaggcttt gaggcaggaa gaccagtctt acaagaattt tggtttgttc
     4921 ttgtcatata tagatgtaaa cgatgataag gtcaacaagc caaataccgt catggaattg
     4981 ccagaaggcg tggaggtggt ctttgcagat tcgagtggtc agcagacaac ctttgctggg
     5041 gctatgtacg atatgatggc taaactcgaa tataatgatg agtggaaggt tttaaatcct
     5101 caacagaaat taaaatttaa gtttatcgta aaaaaagatg gacaaattat ccaacaagat
     5161 gcagactgga gagaaatcac attacatgtg tataatgatg tcgatgcagt gaaggggatg
     5221 gtgaaaacaa cactcacaaa tacacgtaat aactttgaag cgggcatcgt agacaatatc
     5281 gacttctctg gcttgccaga agagatgaaa aaagaagcga tagagatgga gaaaacatat
     5341 cggaatgtgg acggaactct accgcaagac ggagagatgc cacacttttc gaatccgggc
     5401 gataagcact atgactggat aaataaggac ggtgaaggaa gcgacggtac tcacgctaca
     5461 tcaccggcac gatatttccc gtatgacatg gatttatttc agggagatgg agctgaagtt
     5521 gataaacatc tgaagggata tataccttat atccaaggtt acaaaaatga acgtgattat
     5581 gatgatatag ggattgatcc cagtgaacat gataaggaat tgatagacta ttacagccta
     5641 ggtcccatct ttacaagaac catgtttggt cgttctatga ctccggaacc gggaggcgtg
     5701 aatgaaagct attggcactc gttgacgcag gcgatgccta tcccgcagct tgactttgag
     5761 cctgaggtca atctggatat cgtaaccctt tccgataatc cacaaccgaa tccaaaggga
     5821 acagtcaaga ttgtctacaa ggctttgaat gctgacggta cagatgtaga tagcagtgtg
     5881 gttctaagag cagatgtcac tgacacagag gatgcagcgg taggtacacc atggaatgcc
     5941 aaagagacgg gtgttgacca tgataaggat actgctacag attctatcga cgaaagacct
     6001 gaaacattta cgacgcaagc gacagaaaca aatccaagtc gtgaatataa actggtatct
     6061 gcaaaaacaa cggtacaaac accgacagat gcagctccag ttactgttac agatgatgca
     6121 caactcgaag gtcaagtaat agaaggaacc actaccgtaa cctattatta tgccttggtg
     6181 caggaacaac cagccacttc aagagaagtg aaaggtgatg ttatcatcaa gtatgaggat
     6241 actgctggaa cagaaatcaa aggtcagttg aaggatactg atcaaggagt ggtggcgacg
     6301 tacaccaccc caagtcgtcg ctatatcaag gttgacaatc aagtaaccta cctggactca
     6361 gaaccagctg aaacagtgga gttgtctaat cttgcctaca atgccgacca gactcgtgag
     6421 gatggaacgg ttgagaaacc agctacaatt gaatctgctg gtaagaccta ccgctttatc
     6481 aagctcaaag acgattcagc aacagtaaca ggtttagtca cagaagcgac aaaaacggta
     6541 acctatgtct atgcaccaga acagacacgt caagtaccaa ccccatcaac tggtagtgtc
     6601 attgtggagt acaagttgga gggcagtgaa acaccagaaa aaccagaagg cgaaaaactt
     6661 caggctgact tcaacgacac aacggatcaa ttggtatcga cttcaaccgt tactgaaacc
     6721 tactacgtgg atgaaaatgg tgaggag
//
LOCUS       DASFQS010000105         6407 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.109, whole genome shotgun sequence.
ACCESSION   DASFQS010000105 DASFQS010000000
VERSION     DASFQS010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6407
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.109"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(24..2357)
                     /locus_tag="U1041_001923"
     CDS             complement(24..2357)
                     /locus_tag="U1041_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HEM4769010.1"
                     /translation="MNSKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQ
                     QAFDELTDIAQIFVENPYFSMSATSDISPAMRRLELDTDLNIAELLAVKKVLEVSKSL
                     LDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
                     AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTV
                     YIEPRAVVTLNEEISHLRAEERHEISRILQELSDMLRPHSSIIRNNAWVIGHLDFIRA
                     KHLFARDYKAVVPTISEKQDIALLNVRHPLIAKPVPNDLYFGSQLTAIVITGPNTGGK
                     TIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHT
                     VEILRAADQDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYG
                     IETSGIENASMEFDSNSLRPTYKFMQGVPGRSNAFEIARRLGLSDIIIQSAQSWTDTD
                     SDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENELNKARL
                     EAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLVPEVVDLSKNKVLKKAK
                     IQREAKVGDDIIVTAYGQRGTLTNQLKDGRWEAQVGLIKMTLTKDEFELVKAEKAEQP
                     KKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFIDQALLNNLAQVDIVHGIGTG
                     VIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK"
     gene            complement(2514..3062)
                     /locus_tag="U1041_001924"
     CDS             complement(2514..3062)
                     /locus_tag="U1041_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEM4769011.1"
                     /translation="MISLAIILILAWSFYIGYSRGLVLQAFYSMGSIIALAVATATYK
                     KLASFLYLWVPFANATQGSSNYYFDEKYLFDLDMVFYAGLAFLLIYVLVYAIVRFIGI
                     FVHLLEAFNPDTKTTNLISGALAVLVTFISLQIVMVLLSTIPLALIQDKLHSSFLANI
                     MIQYTPFTSSFLKSLWLSNIAG"
     gene            complement(3059..3370)
                     /locus_tag="U1041_001925"
     CDS             complement(3059..3370)
                     /locus_tag="U1041_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769012.1"
                     /translation="MANLNRYKFTFGEKQLTLTTEHDNLFMEEIERIAQEKYQAIKEK
                     MPTADPETLALLLAINALSVQLTREMAFEQKEQELASVKEKVLKKNVTLIDLDELEDK
                     V"
     gene            complement(3428..4141)
                     /gene="treR"
                     /locus_tag="U1041_001926"
     CDS             complement(3428..4141)
                     /gene="treR"
                     /locus_tag="U1041_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HEM4769013.1"
                     /translation="MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVR
                     KALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLTSYQELTNVLQLSTKTDVVSLDM
                     ITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
                     EYLENKLGLDIAYAQKEITVEPTSREERDLMQIQDDYLVLIKSRVYLGDTRQFQYTES
                     KHKIDKFRFVDFARRKHSL"
     gene            4375..6369
                     /gene="treP"
                     /locus_tag="U1041_001927"
     CDS             4375..6369
                     /gene="treP"
                     /locus_tag="U1041_001927"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HEM4769014.1"
                     /translation="MGKFEKEAKQLLDAIGGKENVNAVTHCATRMRFVLADDKKANVK
                     VIEDIPAVKGTFTNAGQFQVIIGNDVPIFYNDFTAVSDIEGVSKEAAKSAAKSNQNAI
                     QRVMTMLAEIFTPIIPALIVGGLILGFRNVLEGVQIEALGQAMKDGELLFDASGKPIW
                     NTIVQVSPFWNGVNHFLWLPGEAIFHFLPVGITWSVSRKMGTSQILGIVLGICLVSPQ
                     LLNAYAVPGTDAATIASDWSWNFGAFSIARIGYQAQVIPALLAGLALSYLEIFWRKVV
                     PEVVSMIFVPFLSLLPAIILAHTVLGPIGWTIGQWLSTIVLAGLTGPLKWLFGAVFGA
                     LYAPFVITGLHHMTNAIDTQLIADAGGTGLWPMIALSNIAQGSAVFAYFLMNRHNEKE
                     AQVSLPATISAYLGVTEPALFGVNVKYIYPFVAAMIGSSIAGLLSVTFNIQAASIGIG
                     GLPGILSIKAEYWGAFFMTMIVAIVVPMILTAVFKRTGAFSKKEETVEEVVVVTETVV
                     ETGSAIELISPLTGQAKELSQATDPVFASGVMGQGVLIDPSEGILVAPVDGEVSVLFP
                     TNHAVGITATNGVELLMHIGMDTVGLEGKGFTAHVKQGDKVKAGDKLISFDIDVIKAA
                     GLVAETPVIVTNQTDFDTQVIGNLPRAISQGEAILTVTKN"
BASE COUNT         1771 a         1493 c         1292 g         1851 t
ORIGIN      
        1 gcacctgcag gtgctttgtg tttttactta aaggtcacaa tggtacaacc tgaaccacct
       61 gcattttgtg gagcatagcc aaattccttg acctgcttgt tgcgacggag gtacttggtc
      121 accccttctc ggataacccc tgtaccgata ccgtggacaa tatcgacttg ggctaggttg
      181 ttgagcagag cttggtcgat aaactcatcc agctccatca tagcctcttc gtagcgtttg
      241 ccacggagat ctaagcgagc ttttggtcct cgtacattgg cacgtttgac cgtgtgaacc
      301 tggcgcttct taggctgctc tgccttttcc gccttgacca gttcaaactc atccttggtc
      361 aaggtcatct tgattaagcc aacctgggct tcccaacgcc cgtccttgag ctgattggtc
      421 aaggtcccac gttgcccata agctgtaacg ataatgtcat cgcccacctt ggcttccctc
      481 tgaattttag ctttcttcag caccttgttt ttagacagat ccaccacttc aggcaccaac
      541 tttttcagct ctgccttggc ttcgataatc tggtggggct taagactagc tgcagcatgg
      601 agatttttca gaatatcctc gctttctgcc aatgccatat ctacaatttc cttggcttcc
      661 aagcgtgcct tgttgagctc attttcccgc tcacgattga gctcgtcata gagcttgcgg
      721 agggctcggt tcatcttgta attttcttgc tccacatcac gaatcttatc cagacgctga
      781 cgactttcaa ccgtctggct ctctaacttc tcgataattc gattgacgtc gctatctgta
      841 tcggtccaag actgagccga ctggataatg atgtccgaca gaccaagacg gcgggcaatt
      901 tcaaaggcat tggagcgacc aggaacaccc tgcataaact tataggtcgg acgcaggcta
      961 ttgctatcaa actccatgct ggcattttca ataccagagg tttctatccc gtaggccttg
     1021 agctcagggt agtgggtagt cgccatggtc ttgatgcccc gcagacgaag gtcatccaaa
     1081 atagccattg ccaaggatgc cccctcctgc ggatctgtcc ccgctcccaa ctcgtcaaag
     1141 agaatgagag aatcttgatc agctgctctt aaaatttcca ccgtgtgggt catgtgactg
     1201 gagaaggttg ataaactctg ctcaatcgac tgttcatccc caatatccgc aaaaatttct
     1261 ttgaagatag ctacccgact gcccttatca gccaaaatag gcaaaccaga ctgggccatc
     1321 agatgggtca atcccaaggt cttaagcatg atggtcttac cacctgtgtt gggacctgtt
     1381 atcacgatag ccgtcaactg actaccgaaa taaaggtcat ttggtacagg cttagcaatg
     1441 agaggatgcc gaacgttgag aagggcaata tcctgcttct ccgaaatagt cggaactaca
     1501 gccttgtaat ctcttgcaaa aaggtgtttg gcgcggatga aatccaaatg cccaatgacc
     1561 caggcattgt tgcggataat actgctatga ggtcgcagca tgtcggacaa ctcttgcaaa
     1621 atccgactga tttcatgccg ctcttctgca cgtaggtgac tgatttcttc gttcaaggtc
     1681 accactgccc gcggctcaat ataaacggtc gaacccgaag cagaaatatc atggacaacc
     1741 cctgcaattt tattacgata ggtattttta acagggagga cattgcgtcc attacggctt
     1801 gccaaaatgc tatcggacag catgtcgccc ttggtcttca aaatatcttg catgacctga
     1861 cgaacttgat cttcagcttc acggattttt cttctaatac gagccagctt ttctgaggca
     1921 aaatcctcta caaaaccagc atcattgatg gactggaggg agccctgtaa atgtggaaaa
     1981 agctcaatct tctcaaagag tttatccaac tggctaagac tgacattttc cagatttcca
     2041 taaaaatcca agagagattt agaaacttcc aagacctttt taacagctaa taattcagcg
     2101 atattgaggt ctgtatccaa ttccaaacga cgcatggctg gactaatgtc actcgtagca
     2161 gacatgctga aatagggatt ttccacaaaa atctgcgcta tatctgtcaa ctcgtcaaag
     2221 gcctgttgga tacggtggac ttccaccata ggctccaact gtcgcaattc ttcaaagccc
     2281 tgttccgtca agagataggg ctcaattttt tgtcttacct tgtgaaattc aagggtttca
     2341 ataattttac tattcatatg ttcctactta atcttttcct tagctttatc tcattatcaa
     2401 aacaataaaa gataaaaata tagtctttcc cactcccact catcaaatca acaacgtctg
     2461 attttgattt tcgaagagta ttataaatga cgataaaaag gataaggtct cccttaccct
     2521 gctatattac tcaaccagag agattttaaa aagctactag tgaatggtgt gtactgaatc
     2581 atgatgttgg caagaaaact actgtgcaat ttatcttgaa tcagcgctaa cggaatagtt
     2641 gatagcaaga ccatgacaat ctgaagagaa ataaaagtca ccaagacagc caaggcgccg
     2701 cttatgagat tagtcgtttt tgtatcagga ttaaaagcct ctaatagatg gacaaatatt
     2761 cctatgaaac gcacaatagc ataaaccaag acgtatatca aaagaaaggc caatcccgca
     2821 taaaatacca tatctaggtc aaagagatat ttctcatcaa aataatagtt ggagctcccc
     2881 tgagtagcat tggcaaatgg cacccagaga taaaggaagg atgccaattt tttataagta
     2941 gccgttgcaa ccgccagagc aataatactt cccatgctat aaaaggcctg tagaactaga
     3001 ccacgactgt agccaatgta gaaactccat gccaaaatga gaataattgc taatgaaatc
     3061 ataccttgtc ctcaagctca tctaagtcaa tcaaggtcac attctttttc aagacctttt
     3121 ctttgacgct tgcaagttct tgttcctttt gttcaaatgc catctcgcgc gttagttgaa
     3181 cggatagagc attgattgcc aacaaaagcg cgagggtttc agggtccgcc gtcggcatct
     3241 tttctttgat ggcttggtat ttttcctgtg caatacgctc aatctcttcc ataaagagat
     3301 tgtcatgctc agttgtcaag gttaattgct tctcgccaaa tgtaaattta tatcgattta
     3361 agtttgccat atcttacctc ttcttctatc tattatagcg taaaaaactt gatttggcta
     3421 atctctccta taaagaatgc tttctacgag caaaatctac aaaacggaat ttatcaattt
     3481 tatgcttgct ttctgtatat tggaattgtc gcgtatctcc taagtagacc ctggatttta
     3541 tcaacaccag ataatcatcc tgaatctgca tcaaatctcg ttcttctcgg ctggtcggct
     3601 ctaccgtaat ctctttttgt gcataagcaa tatcaaggcc taacttattt tctaggtatt
     3661 cgtagatgga tttttcagca atagcagttg tcaactctgg cacgacatcg acagcaagat
     3721 aatctgtatc cacaacggag accttaccgt caatcgaacg tgtacggaca actttccaca
     3781 ccttgctata cggctcaaag cctgtcaagt gcgaaaggct actattaacg gtaatcatat
     3841 ctaagctgac aacatctgtc ttggtagaaa gctggagaac atttgtcaat tcctgatagg
     3901 aagttaaacc tgaaactggg aaattgagaa tttcttgctt aaggaccatt gaaccacgcc
     3961 cttgcacttt ttgaatcaaa cctccctcag tcaaaatcgc caacgcctta cgaaccgtat
     4021 cacgactaac accatagatt tcctggagct gttgttctgt cggtagggag ctttctgccg
     4081 gataaacatt tgtccgtatt ttttctttta agtcattata aatttcttgg tattttttca
     4141 tcatttcctc gcaaattcat ctgtcaaata acatacaact atcaacatta taacaaaatt
     4201 catttcaaaa ttaaaaaaaa ctaagcaaaa acgcttgcat tattttttga aatcggatac
     4261 aatgataaca caaaagaaat ttgtccgtac aaatttcaaa aaagacatac ttttgggaga
     4321 tgtctaaaaa atatagggtg acggattcca taagccgtct agaaggaaaa atatatggga
     4381 aaatttgaaa aagaagccaa acagctcttg gacgctattg gtggaaaaga aaatgttaac
     4441 gcagtaacac actgtgcgac acgcatgcgc tttgttcttg cggatgacaa aaaggcaaac
     4501 gtaaaagtca tcgaagatat tcctgctgta aaaggaacct ttaccaacgc aggtcagttc
     4561 caagttatca tcggtaacga tgtcccaatc ttctacaatg acttcacagc cgtgtctgat
     4621 attgaaggtg tatcaaaaga agctgccaag tcagcagcga aaagtaacca aaatgccatc
     4681 caacgtgtca tgactatgct ggcggagatc tttacaccaa tcatcccagc ccttatcgtc
     4741 ggcggtttga tcctcggttt ccgtaacgtt ttggaaggcg tacaaatcga agcacttggt
     4801 caagctatga aagatggaga actcctcttt gacgcaagtg gtaaaccaat ctggaacact
     4861 atcgttcaag tatcaccatt ctggaatggt gtcaaccact tcctctggtt gccaggtgaa
     4921 gctatcttcc acttcctacc agtaggtatc acttggtctg tatctcgtaa aatgggaact
     4981 tctcaaatcc ttggtatcgt ccttggtatc tgtttggttt ctccacagtt gctcaatgct
     5041 tatgccgtac ctggtacaga tgcagcaact attgccagcg actggtcttg gaacttcggt
     5101 gcatttagta ttgcccgtat cggttatcaa gcgcaagtta tcccagccct ccttgctggt
     5161 ttggcactgt cttacctaga aatcttctgg cgtaaagttg ttccagaagt ggtctcaatg
     5221 atcttcgtac cattcctatc acttcttcca gcaattatct tggctcacac tgtccttggt
     5281 cctatcggtt ggacaatcgg gcaatggttg tcaactatcg tattggctgg tttgacaggc
     5341 ccattgaaat ggctcttcgg tgcggtattc ggtgcccttt atgcgccatt cgttatcact
     5401 ggtcttcacc acatgacaaa cgccatcgat acacaattga ttgcggatgc tggtggaact
     5461 ggtctctggc caatgattgc tctttctaac attgctcaag gttcagcagt atttgcctac
     5521 ttcctcatga accgtcacaa tgaaaaagaa gctcaggttt cacttcctgc aactatttct
     5581 gcctacctag gtgttactga accagccctc tttggtgtca acgtaaaata catttaccca
     5641 ttcgtagctg ctatgattgg ttcaagtatc gctggcctac tttctgtaac cttcaacatc
     5701 caagctgctt ctatcggtat cggtggtctt ccaggtatct tgtctatcaa ggctgaatac
     5761 tggggtgcat tcttcatgac aatgattgtt gcgattgttg tcccaatgat tttgacagct
     5821 gttttcaaac gtacaggtgc attttcaaaa aaagaagaaa ctgttgaaga agttgtagtc
     5881 gtaactgaaa ctgtcgttga aactggttct gctatcgaat tgatcagccc cctaactggt
     5941 caagcaaaag aattgtcaca agccactgac cctgtattcg catctggtgt catgggacaa
     6001 ggtgtcctta tcgatcctag cgaaggtatc ttagttgcac ctgttgacgg tgaagtatct
     6061 gtcctcttcc caactaacca cgctgttggt atcactgcta caaacggagt tgaactcctt
     6121 atgcacatcg gtatggatac tgttggattg gaaggcaaag gtttcacagc ccatgtcaaa
     6181 caaggtgaca aggtaaaagc tggcgataaa ctgattagct ttgacattga tgtcatcaag
     6241 gctgctggtc tcgtcgcgga aacaccagtt atcgtgacca accaaactga ctttgacact
     6301 caagttatcg gaaatcttcc tcgtgccatc tcgcaaggcg aagctattct gacagttaca
     6361 aagaattaat gttctaagag ggggagcggg aaagaactcg actggtc
//
LOCUS       DASFQS010000106         6397 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.110, whole genome shotgun sequence.
ACCESSION   DASFQS010000106 DASFQS010000000
VERSION     DASFQS010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6397
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.110"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(12..1148)
                     /gene="dnaN"
                     /locus_tag="U1041_001928"
     CDS             complement(12..1148)
                     /gene="dnaN"
                     /locus_tag="U1041_001928"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000581170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEM4769015.1"
                     /translation="MIQFSINKNIFLQALSITKRAISTKNAIPILSTVKITVTSEGIT
                     LTGSNGQISIEHFISIQDENAGLLISSPGSILLEAGFFINVVSSMPDLVLDFNEIEQK
                     QIVLTSGKSEITLKGKEAEQYPRLQEVPTSKPLVLETKVLKQTINETAFAASTQESRP
                     ILTGVHFVLTENKNLKTVATDSHRMSQRKLVLDTSGDDFNVVIPSRSLREFTAVFTDD
                     IETVEVFFSNNQILFRSEHISFYTRLLEGTYPDTDRLIPTEFKTIAIFDTANLRHSME
                     RARLLSNATQNGTVKLEIANNVVSAHVNSPEVGRVNEELDTVEVSGEDLVISFNPTYL
                     IEALKATTSEQVKISFISSVRPFTLIPNNEGEDFIQLVTPVRTN"
     gene            complement(1302..2669)
                     /gene="dnaA"
                     /locus_tag="U1041_001929"
     CDS             complement(1302..2669)
                     /gene="dnaA"
                     /locus_tag="U1041_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEM4769016.1"
                     /translation="MNQEQLFWQRFIELAKVNFKPSIYDFYVADAKLLGINQQVANIF
                     LNRPFKKDFWEKNFEELMIAASFEIYGEPLAIQYQFTEEVTKVVSPTRTTYSPSTPAS
                     TTDIVEEVLQPVHPDIKPQYTFSNFVQGDNNHWAKAAALAVSDNLGELYNPLFIFGGP
                     GLGKTHILNAIGNKVLADNPQARIKYVSSETFINEFLEHIRLNDMESFKKTYRNLDLL
                     LIDDIQLFHSKKVTQVEFFNTFDALHQKNKQIVLTSDRNPDYLDNLEERLVTRFKWGL
                     TSEITPPDFETRIAILRNKCEAFPYDFTNDTLSYLAGQFDSNVRDLEGALKDINLLAT
                     MRNLSEITVEVAAEAIRSRKQTNPQNMVIPIEKIQTEVGNFYGVSLKEIKGSKRVQHI
                     VHARQVAMFLAREMTDNSLPKIGREFGNRDHTTVMHAYNKIKSLLMDDDNLEIEITSI
                     KNKIR"
     gene            complement(2872..3636)
                     /locus_tag="U1041_001930"
     CDS             complement(2872..3636)
                     /locus_tag="U1041_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEM4769017.1"
                     /translation="MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPI
                     IVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKELTDDDLLYQAIIENLQRSNLNP
                     IEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
                     RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSK
                     TLGTATKIIKKKNGSGEIRISFNDLDEFERIINNLK"
     gene            complement(3697..4893)
                     /locus_tag="U1041_001931"
     CDS             complement(3697..4893)
                     /locus_tag="U1041_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEM4769018.1"
                     /translation="MERIPYMKKYLKFTILFVIGFLGGLVGALSASFFQPQVQQANSA
                     ITSVSNVQYNNETSTTKAVEKVQNAVVSVINYQKSANNSLGAIFGNIESSDELAVAGE
                     GSGVIYKKDGQYAYIVTNTHVINNAEKIDILLASGEKISGELVGSDTYSDIAVIKISA
                     DKVTAVAEFADSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQSEDGQTI
                     STNAIQTDTAINPGNSGGPLINIQGQVIGITSSKITSSSVSSSGVAVEGMGFAIPAND
                     AVAIINQLEKAGKVSRPALGVHMVNLTTLSTSQLEKAGLSNTELTSGVVIVSTQSGLP
                     ADGKLETFDVITEIDGETIQNKSDLQSALYKHQIGDTITVTYYRNNQKQTVDIKLTHS
                     TEELSE"
     gene            5068..5547
                     /gene="rlmH"
                     /locus_tag="U1041_001932"
     CDS             5068..5547
                     /gene="rlmH"
                     /locus_tag="U1041_001932"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEM4769019.1"
                     /translation="MKIKLITVGKLKEKYLKEGIAEYSKRLGRFTKLDMIELPDEKTP
                     DKASQAENEQILKKEADRIMSKIGERDFVIALAIEGKQFPSEEFSQKISDIAVNGYSD
                     ITFIIGGSLGLDSCIKKRANLLMSFGQLTLPHQLMKLVLIEQIYRAFMIQQGSPYHK"
     gene            5572..6255
                     /locus_tag="U1041_001933"
     CDS             5572..6255
                     /locus_tag="U1041_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
                     /protein_id="HEM4769020.1"
                     /translation="MNQKEYRVFEGLRIACSLTFISGYLNAFTFVTQGGRFAGVQSGN
                     VISLAYFLTKGDFAQVVNFSIPILFFVFGQFFTYLARRYFEKQTWSWHFGSSVMMLVL
                     ILLTIILSPIMPASFTIASLAFVASIQVETFRRLRGAPYANVMMTGNVKNAAYLWFKG
                     VIEKDSELRKTGRNILLTIIGFMLGVIISTHLSFQFEEYALIGLILPVLYINYELWQE
                     KRPTRGRSK"
     gene            complement(6253..6326)
                     /locus_tag="U1041_001934"
     tRNA            complement(6253..6326)
                     /locus_tag="U1041_001934"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6290..6292),aa:Arg,seq:tct)
BASE COUNT         1928 a         1090 c         1172 g         2207 t
ORIGIN      
        1 cttaatatta tttagttggt acgaactggt gtaaccaatt gaataaaatc ttccccttca
       61 ttatttggaa tcaatgtaaa tggacggaca gaagagataa agctaatttt cacttgttca
      121 ctagttgtgg ctttcaatgc ttctatcaag taagttgggt taaagctgat tactaagtct
      181 tcacctgata cttctacagt atctaattcc tcattcacac gtccaacttc tggagaattt
      241 acatgagccg atacaacatt attagcaatt tctagtttta ctgtaccatt ttgggttgca
      301 tttgaaagaa gacgagcacg ctccatcgag tgacgaagat ttgcagtatc aaaaattgca
      361 attgttttaa actcagttgg aattaagcgg tctgtatcag ggtaggtacc ttctaataag
      421 cgtgtataga agctaatatg ctcgcttcta aaaaggattt gattatttga aaagaagact
      481 tccactgttt caatatcatc tgtaaaaact gcagtaaatt cacggagaga acgacttgga
      541 atgacaacat taaaatcatc accagatgta tcaaggacca atttcctttg gctcatacgg
      601 tgtgaatctg ttgcaacagt ttttagattt ttattttctg ttaaaacaaa atgaacaccc
      661 gtaagaatag gacgactttc ttgtgtagaa gctgcaaatg ctgtttcatt aattgtttgt
      721 tttaatactt tggtttctaa caccaatggc tttgaagttg gaacttcctg taaacgagga
      781 tactgttctg cttcttttcc ctttaatgtg atttcagact taccacttgt caaaacgatt
      841 tgcttttgtt caatttcatt gaagtcaagg actaaatccg gcatactgga tacgacatta
      901 ataaagaaac cagcttctaa gagaatggaa cctggagaac tgatcaaaag tcctgcattt
      961 tcatcttgaa tagaaataaa atgttcaatc gagatttgtc catttgaacc agttaaagta
     1021 atcccttcac tagttactgt aatttttact gttgaaagaa ttggaatagc attttttgta
     1081 ctgattgccc gtttagtaat actaagtgct tgtagaaata tatttttatt aatagaaaat
     1141 tgaatcatgg aaactccttt atttattatt tataaggtta gtagtagtag taggccctgt
     1201 gtattctgtg gaaaagtagg tcaaagccat aactttcaag aaaaatagct tgttcacaac
     1261 ttgtgggaaa gtagatggat tttttaaaac ttatacacag gtcatcgaat tttatttttg
     1321 atactggtta tttcgatttc caaattatca tcatccatta gcaaactttt aatcttgtta
     1381 taggcgtgca tgactgttgt atggtcacga ttaccaaatt ctctaccaat ttttggcaaa
     1441 gagttgtctg tcatttcgcg ggctaaaaac atagcaacct ggcgcgcgtg aacaatgtgt
     1501 tggacacgtt tagagccctt tatttctttg aggctaactc catagaaatt tccaacttct
     1561 gtttggattt tttcaatcgg aatgaccatg ttttgagggt ttgtttgctt cctagaacga
     1621 atggcttcag cagctacttc tactgttatc tcagatagat ttcgcatggt agcaagtagg
     1681 ttaatgtctt tcaatgctcc ctcaagatca cggacgttgg aatcaaattg acctgctaag
     1741 taggacaggg tatcattagt gaaatcataa gggaaggcct cgcatttatt gcgtaaaata
     1801 gcaatacgtg tttcaaagtc aggaggtgtg atttcactcg ttaaacccca cttaaaacga
     1861 gttactaatc gttcttcaag attgtctaga tagtcagggt ttctatcact tgtcaggact
     1921 atttgtttat ttttttggtg caaggcatcg aaggtattaa aaaattctac ttgagtaact
     1981 tttttgctat ggaataattg aatatcatca attagaagta agtccagatt acgataggtt
     2041 tttttgaaac tttccatatc attgagacgg atgtgttcta aaaattcatt gatgaatgtt
     2101 tccgatgaga catattttat ccttgcctgg ggattatcgg ctagaacctt atttccaatt
     2161 gcatttaaaa tatgagtttt tccaagacca ggaccaccaa agataaatag tggattatag
     2221 agctctccta agttatcaga aacagctagt gcagctgctt ttgcccagtg attattgtct
     2281 ccttgtacaa agtttgaaaa ggtatattga ggctttatat caggatggac aggttgtagt
     2341 acttcctcta ctatatctgt tgtagaagct ggagtggaag ggctgtatgt tgttctagtc
     2401 ggagaaacta ctttagtcac ttcctctgta aattgatatt ggatggcaag aggctctccg
     2461 tagatttcaa aactagcggc aatcattaac tcttcgaagt ttttttccca gaaatctttt
     2521 ttaaatggac gatttaagaa aatattggca acttgctggt tgattccgag taattttgca
     2581 tcagcgacat aaaaatcata aatagatggc ttaaaattta cttttgctaa ttcaataaat
     2641 cgttgccaaa aaagttgttc ttggttcata ttttccccct ttcacattat attcgttaga
     2701 atagtgtacc ataaaaaaca aaagttttcc acagataatt ttaaaaatcc acactgttaa
     2761 gaaaagtttt ccacaagatg tgaataaaag tcagaacctt tgctggtcct gactttttgt
     2821 aatgatttta gtgtggaaaa gagtgtttat aaaaataaat tgtaaacaag tctattttaa
     2881 attgttgata attctttcga attcatcgag gtcattaaag ctaatccgaa tttctccgct
     2941 cccgtttttc ttcttgataa tttttgtagc tgttccaaga gttttactga gtgaatcttc
     3001 ctgttctttt aaaaattggt cgcgttgttt aagtttagtg tgttttttct tatttgcagc
     3061 tattaatttt tcaagcgtac gcacacttaa atcctttgat aaaatgagtt gaacccattc
     3121 ggcttgcttt tcttctgaaa atgacaccaa ttgtcgcgcg tgcccttgtg aaatttttcc
     3181 ttcttctaca gcttgtttag tctgagatga tagatttagt aggcgcaata aattactgat
     3241 atatggtctt gattttccca tgatttgagc aacttcatca tgcgttaacc ctctactaat
     3301 caatttttga taagaggctg cttcttctat cggatttaag ttagaacgct gcagattctc
     3361 tatgatagcc tgatagagta aatcatcatc agttagttct tttaccactg ctggtattgt
     3421 agtcagtcca gctaattgac tggctcgcaa ccttctttct ccagctaata attcgtatcc
     3481 gataatagaa gattttctta caataatcgg ttgaattaag ccattttcct taatggattg
     3541 agcgagctca agtagctcct tttcatcaaa atgaattctt ggctgatagg gattgggatg
     3601 gatttctgaa atatttagtg tacgtaattc ttccatatat ccttattcta gcaaaaaaaa
     3661 cgagacttta caattgtgta aagtctcgtt tgtcaattat tcgctaagtt cttctgtaga
     3721 atgtgtcaac ttaatgtcaa cagtttgttt ctgattattg cggtaataag ttacagtgat
     3781 tgtgtctcca atttgatgtt tgtagagagc gctttggaga tcactcttat tttgaatagt
     3841 ttctccgtca atctcagtaa tgacatcaaa agtttctaat tttccatctg caggtagtcc
     3901 actttgtgta gagacaatta cgacaccgga tgttaattcc gtatttgata atccagcttt
     3961 ttctaattga ctagttgaca aggtcgtcaa gttaaccata tgaactccaa gagcaggtcg
     4021 gctaactttt ccagctttct caagttgatt gataatggct acggcatcat ttgcaggaat
     4081 agcgaatccc atcccttcca cagccacacc tgagctactt acagaacttg aggtgatttt
     4141 gctagaggtg ataccaataa cttgtccttg gatattaatc aatggtcctc cagagtttcc
     4201 agggttgata gctgtatcgg tttgaatagc gttggttgag attgtttgac catcttctga
     4261 ttgtgaagta actgtccgac ttagactaga aataatacct tgagtaactg tattagcgta
     4321 gacgctacct agaggactac caattgcgat agcagtttct ccaactttaa ttgtatcgga
     4381 atcagcaaat tcagcaacag cagtgacttt atctgctgat atttttataa cagctatatc
     4441 agaatatgta tcggaaccaa cgagttcacc gctgattttt tctccagatg ctaaaagaat
     4501 atcaatcttt tctgcgttat taataacatg cgtatttgtc acaatatagg catattgacc
     4561 atctttttta tagataaccc cagacccctc tccagcaacg gctagttcgt cagatgattc
     4621 aatatttcca aagatagcac caagactatt gttggctgat ttttggtaat taataacaga
     4681 cacaacagca ttttgtactt tctctacagc ttttgtggtg gaagtttcat tattgtattg
     4741 aacattactg acactagtga tggcagaatt tgcttgttga acctgtggct ggaagaaaga
     4801 ggctgataag gccccgacaa gaccacccaa aaatccaatt acaaataaaa tcgtaaattt
     4861 caaatatttt ttcatataag gaatcctttc catttcttta attttcctta agattactct
     4921 tgctttctta attatagctt aaagttttca aaaatcaatc cacaacctgt ggataactct
     4981 gtgaattatg tgaaaaaact ctagccatat cctgattttc taaaaatatt ttctgtcgta
     5041 cgcttgtgga tatgttaaaa ttattttatg aaaataaaat tgattaccgt tggaaaattg
     5101 aaagaaaagt acctcaaaga aggtattgca gaatatagta aacgattggg acgatttact
     5161 aagttggata tgattgagct tcctgatgaa aaaacaccag ataaagccag tcaggcagag
     5221 aatgaacaaa tattaaaaaa agaagccgat agaattatgt ctaaaattgg agagcgagat
     5281 tttgtcattg ccttagcgat agaaggcaaa caatttccat cggaagaatt tagtcaaaag
     5341 atatctgaca ttgcagtaaa tgggtattca gatataactt ttatcatcgg tggtagtttg
     5401 ggtctcgatt cttgtattaa aaaaagagct aatttgttga tgagttttgg acagttgaca
     5461 cttccccatc aactaatgaa attagttctc atcgagcaga tttatcgtgc atttatgatt
     5521 cagcagggaa gcccatatca taagtagttt cacgtgaaac aaggagtgaa aatgaatcaa
     5581 aaagagtatc gtgtttttga gggattgaga attgcttgtt cattaacgtt tatcagtggt
     5641 tatttaaatg cctttacttt tgtgactcag ggtggtcgct ttgctggagt acaatctgga
     5701 aatgttattt ccctagctta ttttttaact aaaggtgatt ttgcgcaggt agttaatttt
     5761 tccattccca ttttattttt tgtattcgga caatttttta cctacttagc aagaaggtat
     5821 tttgaaaaac aaacatggtc ttggcacttt ggtagtagtg taatgatgtt agttcttatt
     5881 ttactaacta tcattctctc acctattatg cctgcgtctt ttacaattgc tagtctagcc
     5941 ttcgtagcct ctattcaagt agaaacattt agaaggttac gaggtgctcc gtatgccaat
     6001 gtgatgatga cagggaatgt caaaaatgct gcttatctct ggtttaaagg agttattgaa
     6061 aaagattcag aacttagaaa aacaggtaga aacatcttat tgaccattat agggtttatg
     6121 ctaggtgtca tcatatctac tcacctatcc ttccaatttg aagaatatgc ccttattggt
     6181 ctgattttgc cagttttata tattaattat gaattatggc aagaaaaaag acctactcga
     6241 ggtaggtcta aatgattcca gcaggattcg aacctgcgac cgttcgctta gaaggcgaat
     6301 gctctatcca gctgagctat ggaaccttaa ccattttatt ttacattaaa caaagcactc
     6361 tgtcaataca ataaaaaagg taaattctca aagtaag
//
LOCUS       DASFQS010000107         6390 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.111, whole genome shotgun sequence.
ACCESSION   DASFQS010000107 DASFQS010000000
VERSION     DASFQS010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6390
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.111"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(122..1225)
                     /locus_tag="U1041_001935"
     CDS             complement(122..1225)
                     /locus_tag="U1041_001935"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011226530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEM4769021.1"
                     /translation="MIESEHRPTQIRVNLDAIAENFEQVMTNLPHKTEAFAVVKANAY
                     GHGAVAVAKKLSSQAAGFCVSNLDEALELRKAGIEHPILILGVVPVRFLPVAHQLNIS
                     VTVASLDWLQNTKDLEADLSGLTVHLKLDTGMGRIGFRKIADLLQAIAILEELEYDIE
                     GVYTHFATADEVEQAHFESQLSIFKEFLDVLPITPRWIHASNSATSIWHADTVFNRVR
                     LGNILYGLNPSGRVLELPFDVQPALSLVSEIVHVKQVEAGTTIGYGATYHSTDSEWIA
                     TVPIGYADGLVRSLQGLSVLVDGQACEIVGRISMDQITIRLPHAYPLGQKVTLIGQDG
                     DKTISVQEWADCIGTINYEVVCLLTDRLPRIFE"
     gene            complement(1218..1577)
                     /locus_tag="U1041_001936"
     CDS             complement(1218..1577)
                     /locus_tag="U1041_001936"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEM4769022.1"
                     /translation="MIVGHGIDLQEMEAIESARIKHQGFPKKILTEKEFERYQSLSGR
                     RQLEYLAGRWSAKEALTKALGTGIGKIGFHDIEILNTSKGVPYVTKSPFDGNIWLSIS
                     HSGNFVQASVILEEKDD"
     gene            complement(1692..4217)
                     /gene="secA"
                     /locus_tag="U1041_001937"
     CDS             complement(1692..4217)
                     /gene="secA"
                     /locus_tag="U1041_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEM4769023.1"
                     /translation="MVTNVLRSLIENDKGELRKLEKMADKVFSYADEMEALTDEQLQA
                     KTAEFKERYNNGESLDDLLYEAYAVVREGARRVLGLYPYKVQVMGGIVLHNGDVPEMR
                     TGEGKTLTATMPVYLNALSGQGVHVVTVNEYLSTRDATEMGELYSWLGLSVGINLAAK
                     SPLEKREAYNCDITYSTNSEIGFDYLRDNMVVRAEDMVQRPLNYALVDEVDSILIDEA
                     RTPLIVSGAQGSETNQLYFLADNLVKSLTTEDYIIDIPSKTIGLSDSGIDKAEKFFKL
                     DNLYDIENVAITHFLDNALRANYIMTYDIDYLVNEDQEVMIIDPFTGRTMEGRRYSDG
                     LHQAIEAKEGVPVQNESKTSASITYQNLFRMYKKLSGMTGTGKTEEEEFREIYNIRVV
                     PIPTNRPIARVDHEDLLYPSLEYKFNAVIADVKRRYEKGQPVLVGTVAVETSDLISQK
                     LVAAGVPHEVLNAKNHYREAQIIMNAGQRGAVTIATNMAGRGTDIKLGPGVRELGGLC
                     VIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDDLMKRFGSERIKVFMERMNLT
                     EEESVIKSKMLTRQVESAQKRVEGNNYDSRKQVLQYDDVMREQREIIYRQRQDVITAN
                     RDLAPEIKAMMKRTIERQVAGHFLGSKDEAIDGIIKFAHANLVDDDTLSKATFEAMNQ
                     KEIVEELYERALRVYDSQVKKLRDEERVREFQKVLILRVVDNKWTDHIDALDQLRNAV
                     SLRGYAQNNPIVEYQSEAFAMFNDMIGAIEFEVTRLMMKAQIHDNIERERTSQEAHTT
                     AVKNIMPNQSHAIQENVSFEGVDRNDPCSCQSGKKFKNCHGRK"
     gene            4596..4916
                     /locus_tag="U1041_001938"
     CDS             4596..4916
                     /locus_tag="U1041_001938"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4769024.1"
                     /translation="MVYANDASTVSVQYQYIAQDELTSSEKDSVLSKLKTVSPSKEIA
                     TENQTIYLIYKTEPKKIFGILPATGETGINLLTIGGGLLLVLGISLVGKGKKKGSGKE
                     LSHS"
     gene            complement(5407..6288)
                     /locus_tag="U1041_001939"
     CDS             complement(5407..6288)
                     /locus_tag="U1041_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011227540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM4769025.1"
                     /translation="MTKLYGSLEAGGTKFVCAVGDENFQVVEKTQFPTTTPYETIERT
                     VEFFKRYEDRLAGIAIGSFGPIDIDQNSQTYGYITSTPKPHWSNIDLLGLIAKEFNIP
                     FYFTTDVNSSAFGETLVRKGVKSLVYYTIGTGIGAGAIQNGEFIGGLGHTEAGHTYVS
                     LHPYDVKHEFKGMCPFHNGCLEGLAAGPSLEGRTGVRGELIELNSEVWDVQAYYIAQA
                     AVQATLLYRPQVIVFGGGVMAQEHMLNRVREKFVGLMNDYLPTPDVKEYIVTPAVAEN
                     GSATLGNFALAKQVSEK"
BASE COUNT         1934 a         1437 c         1164 g         1855 t
ORIGIN      
        1 ttacgtcgca gtaataaaag tcaactaaat gacgatattt gtattataga caatctctag
       61 gcaacacttc tctaatattt tagccttcta ttctagtgaa agaggcggat tatcgtcacg
      121 tttactcaaa aattcgaggt aggcgatctg tcaaaagaca aactacctcg taatttatgg
      181 ttccgataca atcagcccac tcctgaacag agatcgtttt atcgccatct tgaccgatta
      241 gggtgacttt ttgaccaagt ggataagcat gcggtaagcg aatggtgatc tggtccatcg
      301 aaatacgtcc tacaatttca caggcctgcc catcgactaa gactgataag ccttgtaagc
      361 ttcgtacgag accatctgca tatcctatcg gaacggtcgc aatccattct gaatcggtgc
      421 tgtgataagt agctccgtag ccaattgttg tgccagcttc aacctgcttt acatgaacaa
      481 tttcagatac gagagataag gctggttgaa catcaaacgg gagttctagc actcgtccac
      541 ttggattaag tccataaaga atgtttccca aacgaacccg gttaaatact gtatcagcat
      601 gccaaatgct tgttgctgaa ttgctggcat gaatccagcg cggagtaatt ggtagaacat
      661 ccaaaaattc tttaaaaata gacagttgac tctcgaagtg cgcctgttca acctcatccg
      721 cagtagcaaa atgagtataa actccttcga tgtcatactc taattcttca aggatagcaa
      781 tcgcttgtag caaatcggct atttttctaa aaccaatccg ccccatacct gtatctagct
      841 taagatgaac agttagacca gataaatcag cctctaagtc ttttgtattt tgcaaccagt
      901 ccagactggc aactgtcaca ctgatattga gttgatgagc tactggtaaa aaacgtacag
      961 gaaccactcc taaaatcaag ataggatgct cgatacctgc tttacgtaac tctaatgctt
     1021 catccaaatt cgaaacacaa aaaccagctg cttgactaga taactttttc gctaccgcaa
     1081 cagctccatg accataagca ttcgccttaa caacagcaaa tgcttcggtc ttatggggca
     1141 agttggtcat tacttgctcg aaattttccg caatcgcatc taagttaacc cgaatttgcg
     1201 tgggtcgatg ttcactttca atcatctttc tcctccaaaa tcacactagc ttgtacaaaa
     1261 tttcctgaat ggctaatgct gagccaaata ttcccatcaa agggactctt cgtcacatag
     1321 ggaactcctt tgctggtgtt cagaatttca atatcatgaa atcctatctt accaatacct
     1381 gttcccaagg ccttagtcag cgcttctttg gctgaccaac gtccagctaa atattctagc
     1441 tgacggcgac cggacagact ttgataccgt tcaaattctt tctccgtgag aatctttttg
     1501 ggaaaccctt ggtgtttgat tctggcactt tcaatcgcct ccatctcctg aaggtcaatg
     1561 ccatgtccta ctatcattaa tcggtctcct tttgcatagt catttcattt attaaaataa
     1621 acaaactgac tctagtgact tgtctaaaaa ttgcaaaagg actggacagc cgtccagtcc
     1681 acgcgtcatt cctatttacg gccgtgacaa tttttaaatt tcttaccaga ctggcatgag
     1741 catggatcat tacgatcaac accttcaaaa gatacattct cctgaattgc atgcgattgg
     1801 ttcggcataa tattcttaac agctgtcgta tgtgcttctt gacttgtacg ctcacgctca
     1861 atattgtcat gaatttgcgc cttcatcatc aagcgggtta cttcaaactc gatagcccca
     1921 atcatatcgt tgaacatagc aaatgcttct gattgatatt caacgattgg attgttttga
     1981 gcatatccac gaagactgac tgcattgcgc aattgatcca aggcatcaat atggtctgtc
     2041 catttgttat ccacaacacg aaggataaga actttctgga attcgcgtac acgttcttca
     2101 tcgcgtaatt ttttcacttg cgaatcatag actctcaaag cacgttcata gagctcttcg
     2161 acaatctctt tctgattcat tgcttcaaaa gtagctttac tcaaggtatc atcgtcaacg
     2221 agatttgcat gagcaaattt gataattcca tcaatagctt catctttcga accaaggaag
     2281 tgaccagcaa cttggcgttc aatcgtccgt ttcatcatcg ctttgatttc aggagccaaa
     2341 tcacggttag cagtaataac atcctggcgt tggcgataga tgatttcacg ttgctcacgc
     2401 atcacatcgt catattgaag gacttgttta cgtgaatcgt agttgttccc ttccacacgc
     2461 ttctgagcag attcaacttg acgtgtcaac attttagact tgataacgga ctcttcttct
     2521 gttagattca tacgctccat aaatactttg atgcgttctg aaccaaagcg tttcatcaag
     2581 tcatcttcga gagatagata gaattgtgat tcacctgggt caccttgacg acctgaacgt
     2641 ccacgaagct ggttatcaat acgacgactt tcatggcgct cagtaccaat aacacatagc
     2701 ccaccaagtt cacgtacacc tggacctaac ttaatatcgg taccgcgtcc cgccatgttg
     2761 gtcgcaatag tgaccgcacc acgctgacca gcattcataa taatctgcgc ttcacgatag
     2821 tggtttttag cattcaatac ttcgtgaggg acacctgcag ctaccaattt ttgagaaatc
     2881 aaatcagaag tttcaaccgc aactgtaccg accaagacag gttgcccttt ctcatagcgt
     2941 ctcttcacat cagcaataac ggcattgaat ttgtattcta gacttggata gagtaaatct
     3001 tcgtggtcaa cacgcgcgat tggacggttg gttggaattg gtacgacacg gatgttgtag
     3061 atttcacgga attcttcctc ttctgtttta ccagtacccg tcatccctga taatttttta
     3121 tacatacgga aaaggttttg gtaggtaata gaggcacttg tcttagactc gttttgaact
     3181 ggtacacctt ccttagcttc gatggcttgg tgaagtccat cagaataacg acgaccttcc
     3241 atcgtacgac ctgtaaatgg atcgataatc atgacctctt ggtcttcatt gaccagatag
     3301 tcaatatcat aggtcataat gtagttggca cgaagtgcat tatccaagaa atgggtaatg
     3361 gctacatttt caatatcgta gaggttatct aacttgaaga atttctctgc tttgtcaata
     3421 cctgaatcag acagaccaat cgttttagat ggaatgtcaa tgatgtaatc ttctgttgtc
     3481 aaagatttaa caagattatc tgccaagaaa tacaactggt ttgtttcaga accttgtgca
     3541 ccagatacaa tcaacggcgt acgagcttcg tcaatcaaga ttgagtcaac ttcatcgacc
     3601 aaggcataat tgagaggacg ttgaaccatg tcttctgcgc gaacaaccat attgtctcgg
     3661 aggtagtcaa aaccaatctc tgagttggtc gaataagtaa tatcgcagtt ataggcctca
     3721 cgtttttcca agggtgattt agcggctaag ttgataccaa ctgatagacc aagccatgag
     3781 tacaattcac ccatttcagt cgcatcacga gtagaaagat actcgttaac cgtcactacg
     3841 tgaacacctt gaccagacaa ggcattcaaa taaacaggca tcgttgcagt cagagtttta
     3901 ccttcacctg tacgcatttc tggaacgtca ccgttgtgaa gaacgattcc tcccataacc
     3961 tgaaccttgt agggatagag gcccaatacg cgacgagctc cttcacggac taccgcataa
     4021 gcttcgtaca aaagatcatc gagggattca ccgttattgt atcgctcctt aaattctgct
     4081 gtcttagctt gcaactgttc atcagtcagc gcttccattt catcggcata cgagaagacc
     4141 ttgtctgcca ttttctcaag ttttcttagc tctcccttat cattttcaat gagagaacga
     4201 agtacatttg ttaccatatc attcatccta tttcaatttt agtcaataat atattgtagc
     4261 agaaaattag gcaattttca aggtttggca ctaggataca cagtattctt agataaaaat
     4321 accataaaac aaacaaatct ggaaaaattt ctacacatta atattacatg gctaaaaaga
     4381 acatgattaa gacaccaatt actaacataa attccaggat accatcctct atctctagta
     4441 aaaatatacc atatacaagt agtataatct tattgtacaa gtaaatatgt aaaaaggaga
     4501 ggaaaatgta taccaagaaa atcgctctta aacaactagc catgtctagt acttcagtag
     4561 ccattgtgag tagcctatgg ggaagctagc ctcttatagt ttacgcaaac gatgcatcga
     4621 cggtatctgt tcaatatcaa tatattgcac aagatgaact aacaagttca gagaaggatt
     4681 ctgtcttatc taagctgaaa actgtctcac cttccaaaga aatagctacg gagaatcaaa
     4741 caatctatct catctacaag accgaaccta aaaaaatatt tgggattctt ccagctacag
     4801 gggagaccgg gatcaatcta ttaacgattg gagggggact tcttctagtt ctaggaataa
     4861 gtttggttgg aaaaggcaaa aagaaaggga gcgggaaaga actcagccat tcatagaaga
     4921 gttcgtcaac aagtccttat ttccagttgt tgagctgaaa cagtttatcc ccagactgtt
     4981 tcactcccac ccccgcagac cacaaattgg ctagtagtaa aatgatcagc cttgtcccca
     5041 tgaccgacaa taccattatt tctgatatac agggaagaga agagaagaaa acatcagtac
     5101 actcctagat cactttgaag atggcagcac cttatttttc ccgctccaat atacagaaaa
     5161 caaagataaa cgtgcttact accaaatagc ggattgggga gttacttatt cacctttcca
     5221 aacattacaa gactactctg acattctaga caaggtagtt ccaagcccac aagcggttga
     5281 atttcgttct gaaaatatgt atactgctct ctccattaca gaaaatcaag agcctgatta
     5341 tagaactagt atttttacag aataagaaaa aagttaggga ttatttctag tccctaactt
     5401 tttatgttac ttttctgata cctgttttgc caaagcaaag ttcccaagag ttgcagaacc
     5461 attttcagca acagctggcg ttacgatata ttctttgaca tctggcgttg ggagataatc
     5521 gttcatcaaa ccgacaaact tctcacgtac acgattaagc atgtgctctt gagccataac
     5581 tcctccacca aatacaatta cttgcggacg atagagaaga gtagcctgaa cagctgcctg
     5641 agcaatataa taggcttgaa catcccacac ttctgaatta agttcaatta attctccgcg
     5701 aacacctgta cgaccttcaa gagaaggacc tgcagctaag ccttccaaac acccattgtg
     5761 gaatggacac atccctttaa attcatgttt tacatcgtaa gggtgtaggg aaacgtaagt
     5821 atgacccgct tcggtatgac ccaagccacc gataaactca ccattctgaa tagcacctgc
     5881 accaatacct gtaccgattg tatagtaaac taaactcttt acccctttac gaaccaatgt
     5941 ttcaccaaaa gctgatgaat tcacatccgt cgtgaagtag aatggaatgt taaattcctt
     6001 agcaatcaga ccaagtaaat caatatttga ccagtgtggt tttggtgtcg aagtgatata
     6061 accataagtc tgtgagtttt gatcaatatc aattggaccg aaagaaccta tcgcaatacc
     6121 tgccaaacga tcttcatagc gcttgaagaa ttcaaccgtt ctctcaatcg tttcataagg
     6181 agttgtcgtt ggaaattgag ttttttcaac aacttgaaaa ttctcatcac ctactgcaca
     6241 aacaaacttt gtaccaccag cttctaaact accatataat tttgtcattt gattgtctcc
     6301 aaaattttta tcacttttat tataacatat aagcaaacag aagaaaaagg ctgaaagcct
     6361 ttttcttgtt aattatgtag tagaggcaga
//
LOCUS       DASFQS010000108         6279 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.112, whole genome shotgun sequence.
ACCESSION   DASFQS010000108 DASFQS010000000
VERSION     DASFQS010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6279
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.112"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            1004..>6279
                     /locus_tag="U1041_001940"
     CDS             1004..>6279
                     /locus_tag="U1041_001940"
                     /inference="COORDINATES: protein
                     motif:HMM:NF019202.1,HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4769026.1"
                     /translation="MSSKDMFRKEQRFSFRKFSFGLASAVIANVIFGGAIANTPVVHA
                     NTTTETAAVATSERIASIPYTVNIVDQAGKVVETKEKKVLVYTVETIATATEYLTADL
                     VPEGYAIVSGLGEVTLTEKADNIFTVKVDKIAPEAAPTTTAESATSETSTAAATPEPA
                     SLAATQSTPVTSEVAEAEVAPTTSEESAKPTERTVYLSYITHYVNEANETVDRTGHLV
                     AVTTTDETAKTQVTVSASENMPSGWELVQDKAKVVVQLVENQTNILVFAVTKKSKEEE
                     IAESQLSNRDVLMRLSLEADLLADEALRQVAKEQAGNTALETAANETKAVAATANEVL
                     ANDAATEVELDDQIDTVRTSTQNLAAEMLKVDKDGILTAMLDATTQAITITTSSTGAV
                     RPIYSEHIRDFATNNNQKSYNNQDFFFGLIGKDLTEQDSQIRATAQASDASTPTISIL
                     GGGGEPINGIQNFGLRDNGSGVLYGTTTISDAGNAFSWQFKASSGSNTAASKFTFVPY
                     TVVKTDEEPVRKGVTQGVTADEILAKVKSDVTHGNGTSSTNEATAGPLNIAFEQHFNS
                     ALTARATGTSTTVAADAKTGKQIWHEIKEYVKVAEADGTAVSVPAVTGSLPTEAGTYD
                     VTVLSTNVHGQTIENTVKVVLNAAPTITASGTGSTNPFNTTNPERKIVYIFGITTGDT
                     EAVTTAKAETGEKAKAPIFDRTIAKPVATITDPDSTSIKVNYGDNAPRSRLNNLGSKM
                     VATAADGTVLKATDGTFTNVTVTNGTANIYLGGTYESLPGGKYTRQFIVSDESNAVVK
                     GEPFYTVSYTDKLVDDQPIAKNQDVALTDTEVFAKLTLDAQSGGFSDTNPNLTVPVSE
                     VTRTIVGYRTADGVYTEQTDLAQFPKDKDFEVKVKTTNVYGQTIYNWVSVDYNLKPKV
                     EIVDAVEGTTKTVYVFSKNNDRTENSEGVTGTNVAFDRNKATKAVVNITDDGQVTRIV
                     YNDARNDTADMLEKGVTPATLVGTDGYFEGSVAAPAGTNATRLLKVTDDKGLVGQSPT
                     FRVYAFSDTVPADVTPVKLAKGNLPDWKEITGKMEIDSNSGYPRNAKVAIPDDAYTRT
                     IVGYRLDGSPDIVAVDSVEKLPTEGSYQVRVKTSNAYGQEIYNWVPVSHYKLEEVSRE
                     TVNKYTDFPAPIHTITELGSSGTVGTVKLEGDLPADFNIANFNLKAGEAAKLAERNLE
                     FVKAGSLGTDGTVGTIQTKNGGKVEYTGSGNLGYVFEYTYQVNNENKTSNLKYTILYT
                     DTQKPIMTPKSEYIRFVDEEYKISVPGTDNAFLNTGKINGSLSVLKDGETGKVSPGLG
                     TNTAITSELDPKGVDVSGGVDNQGGNSTMFNVNITGTGPSEQGTGDYKLRVGENNYPA
                     PPTVTNKPENVGLTDIKVTFVKRAEMTTPVAVVDPANLTTEEKAAVIEQLKKDNADNE
                     KLNALPDTAFTVNADGTVSVDYSAGNADVDAVKDEVANATVKLADEQNKAKAAIDTKL
                     AEEKAAIEAKRDADIAEINNTPGLTDDQKKAARDAVTDTAGDALKALDKSADDAKKAI
                     DAETTVAGINNAKTDGEKALDDATVNGEAAIDLTKDKELAKADVDNQAKAAIEAVKNN
                     PNLDATEQAPYIKAIEDAAKEQKAAIDAAKDTAGITDAVNEAEKVNEEQKLAAAKEDA
                     KDKIAEEAAAAKEAIDKNPNLSGAEKTAAKNAVDTEVAKANDAIDKATTPETVQAAED
                     NGVKAIDAEELAAAKQDAKNKIAKDVEAANAA"
BASE COUNT         2188 a         1258 c         1317 g         1516 t
ORIGIN      
        1 aggcgaaagt gacgatgtat caaagataat tcaaatgact gtactatagt aaattgaatt
       61 aaaaacggga caggttcaag tttatcagct tgaggactct aaagctattt tgagattgag
      121 ctactgatac aataacccaa aactgtccta ctcttgattc aaattgctat acaagagaac
      181 taaacaattg atataagggg aaaagtttcg tccagcccaa aaacataaaa atataacaaa
      241 ctctatctct ttacacaaca atatccatgt aacacccctc gcttacagca agacaagtct
      301 atagtcgcca aggttcaact tcatcaacat gaataaatgt gtgcaaacta ggttatggca
      361 ccgatataaa accagacccc ccttcctcct ctctttacat aaatatacaa gctccatcat
      421 tcgcatttgt tggaaaatat aaaaaagaaa ctggaaaaca ttcagaaaac gctatcaact
      481 atccaagaaa acaaacctca ttctcagcaa ataccatgaa aacgcaccca aaaaccctag
      541 ccgaatcccg actgtaaaaa tttttgaaaa aatttacaaa aaaatatgaa aaatgagaaa
      601 attttcatat tttatacagt tttttagaaa aaaatttatg ctataattag tttgaggagt
      661 cactcataac taaatgaaaa aaactatgaa aataaatcaa aaaaatgcat gtaataagaa
      721 aatgcttaca tgcattttct tcatgcgtat ggcgtggaat gagtattatt ttcttgaatt
      781 tctgaaataa tagtgctata atttaactat cgtacttatg tagatttttc ggagcttttg
      841 cgccaatata cgtcacccta tgttcagaaa tgagctaatc atagacgata cctccctact
      901 aactttttaa agcagggggg ggtatttttg tgtgtaagca agcgataaaa aggtctatgt
      961 tagtgactat ggcataagcc agcataatta taggaggatt ttcatgtcta gtaaagatat
     1021 gtttagaaaa gaacaacgtt tttcttttcg taaatttagc tttggtctag cttcggcggt
     1081 cattgccaac gttattttcg gtggagcaat cgcaaacacc ccagttgtac atgccaacac
     1141 aacaactgaa acagctgcag tcgcaacaag cgagcggata gcatccatac catacacagt
     1201 taacatcgtg gaccaagcag gtaaagttgt tgaaacgaaa gagaaaaagg ttttagtata
     1261 tacagttgag actattgcaa cagcaacaga atacttgact gctgaccttg tgccagaagg
     1321 ctatgccatt gtatcaggat taggtgaagt tacccttact gaaaaagcag acaacatctt
     1381 cacagtaaaa gtagacaaaa ttgcaccaga agcagcacca actacgacag ctgagtcggc
     1441 tacatctgaa acatcaactg cagcagcaac tcctgagcca gcaagtttag cagctacgca
     1501 atcaacacca gtgacgtcag aagtagctga ggctgaggta gcaccaacta catcagaaga
     1561 atcagcgaaa ccaacagaac gtacagtata ccttagctac atcactcatt acgtcaatga
     1621 agcaaacgaa actgttgata gaacaggtca ccttgtagct gtaacaacga cagatgaaac
     1681 agctaaaaca caagtaacag tttctgcatc tgagaatatg ccttctggtt gggaattggt
     1741 tcaagataag gcaaaagttg ttgttcaatt ggttgaaaac caaacaaata tattagtttt
     1801 tgccgtaacg aaaaaatcta aagaagaaga gattgcagaa tcacaattgt caaaccgtga
     1861 tgtcttgatg cgattgtctt tagaagcaga cttgcttgcg gacgaagctc tccgccaagt
     1921 agcgaaagag caagctggta acactgccct tgaaacagct gctaacgaaa cgaaagcagt
     1981 agctgctacc gctaatgaag ttttggcaaa tgacgctgca actgaagtag aactcgatga
     2041 ccaaatcgac acagtacgca caagcacaca aaaccttgcg gctgaaatgt tgaaagtcga
     2101 taaagatgga atcttgacgg cgatgttgga tgcgacaact caagctatta caatcaccac
     2161 gtcaagtaca ggtgctgttc gaccaattta ttcagaacat attcgtgatt ttgcaacaaa
     2221 taacaatcaa aaaagctaca ataaccaaga tttctttttt ggtttgattg gcaaggattt
     2281 aactgaacag gacagccaaa tacgtgcgac agcgcaagct tcggatgcct caactccaac
     2341 catttcaatc ttgggtggtg gaggagaacc aatcaatggt atacaaaact ttggacttcg
     2401 agacaatggt tctggtgttc tatacggaac aaccactatc tcggatgcag gtaatgcctt
     2461 ttcatggcag ttcaaagcta gcagtggtag taatacagca gcatcaaagt tcacctttgt
     2521 accatatact gttgtaaaaa cagatgagga gccagttcgt aagggcgtta ctcaaggtgt
     2581 aactgctgat gagattcttg caaaagttaa gtcagatgtg acacatggaa acggcacaag
     2641 ctctactaac gaagctactg caggtccttt aaacattgcc tttgagcaac atttcaactc
     2701 tgcactaact gctcgtgcaa ctggcacttc tactaccgtt gcagctgatg ctaagactgg
     2761 caaacagatc tggcatgaaa tcaaagaata tgtcaaagtt gctgaagctg acggtactgc
     2821 tgtttcagtt cctgcggtta caggctctct tcctacagaa gcagggacat atgatgtaac
     2881 cgttctttca actaacgttc atggtcaaac gattgagaat actgttaaag tcgttcttaa
     2941 tgctgcccca acaatcacgg catcaggaac aggttcgact aatccattca ataccaccaa
     3001 tccagaacgt aagattgttt acatcttcgg tataacaact ggagatactg aagcggtaac
     3061 aactgctaaa gctgaaacag gggaaaaagc taaggcacca atttttgaca ggactattgc
     3121 gaaaccagtt gcaaccatca cagatccaga tagcacaagc atcaaagtga actatggaga
     3181 taatgcacca cgtagccgat taaataacct cggttctaaa atggtggcaa cggcagctga
     3241 tggtactgta ttgaaggcaa ctgatggtac ctttacgaac gtaaccgtaa ccaatggtac
     3301 tgcaaatatt tatctaggtg gtacgtacga gtccctacca ggtggtaagt atacccgtca
     3361 gtttatcgtc tcagatgaat caaatgcagt agttaaaggc gagccattct acacagtatc
     3421 ttatacggat aaattggtag acgaccaacc tattgctaag aatcaagatg ttgcattgac
     3481 agacacagaa gtttttgcta agttgaccct tgacgctcaa tcaggtgggt tcagtgatac
     3541 aaaccctaat cttacagttc ctgtaagtga agtaactcgt accattgtag gataccgcac
     3601 tgcggatggt gtatatactg aacaaactga ccttgcacaa ttcccgaaag ataaggattt
     3661 tgaagttaaa gttaaaacaa ctaacgttta cggtcagact atctataact gggtgagcgt
     3721 tgattacaac ttgaaaccaa aagttgaaat tgttgacgca gttgaaggca caacaaagac
     3781 cgtttatgtc ttttctaaaa ataatgatag aactgagaat agtgaaggtg taaccggaac
     3841 gaatgtagca ttcgacagaa ataaggctac aaaagctgtt gtaaacataa cggatgatgg
     3901 gcaagtcaca agaatcgttt acaacgatgc tagaaatgac acggccgata tgcttgaaaa
     3961 aggtgtaact cctgcaactc tagttggtac tgacggctac tttgaaggaa gtgttgcagc
     4021 tcctgcaggt actaatgcaa ctcgtttatt gaaagtgact gatgataaag gactcgtagg
     4081 acaaagtcca acattcagag tgtatgcttt ctcagatact gtcccagctg atgtaactcc
     4141 tgttaaatta gccaaaggaa atcttcctga ctggaaagaa attacaggga agatggaaat
     4201 tgacagtaac agtggctatc caagaaatgc taaggtagcg attccagatg atgcttatac
     4261 ccgtacaatt gttggttacc gtttagatgg ctctccagat atagtagctg ttgactcagt
     4321 agaaaaattg ccaactgaag gttcatacca agttcgtgta aaaacaagta acgcctatgg
     4381 tcaggaaatt tataactggg ttcctgtaag ccactataag ctggaagagg tttcacgtga
     4441 gaccgtcaat aaatacacag acttcccagc tccaattcat accatcactg agcttggttc
     4501 gtcaggcact gttggaacag ttaaacttga gggagatttg cccgcagact tcaatattgc
     4561 aaacttcaac cttaaagcag gcgaagctgc aaaactcgct gagcgtaacc ttgagtttgt
     4621 aaaagcaggt agccttggta cagatggtac tgtaggtact atccaaacca aaaacggtgg
     4681 taaggttgag tacactggtt caggtaacct aggctatgtc ttcgaatata cttaccaagt
     4741 aaataatgag aataagacct caaacctaaa atacactatc ttgtacacag atactcagaa
     4801 accgattatg actcctaagt cagagtatat ccgctttgtt gatgaagagt acaagattag
     4861 cgttccaggt acagataatg ccttcctcaa cacaggtaaa atcaatggta gcctttcagt
     4921 tcttaaagat ggcgaaacag ggaaagtatc gccaggtcta ggtacaaaca ccgctatcac
     4981 ttctgaattg gatccaaaag gagttgatgt ttctggaggc gttgacaacc aaggtggtaa
     5041 ctcaaccatg ttcaacgtta acatcacagg aactggtccg tcagaacaag gcacaggtga
     5101 ttacaaactt cgtgttggtg aaaacaacta ccctgcacct ccaactgtaa ctaataaacc
     5161 agaaaacgtt ggcttgacag atataaaagt gacctttgtc aaacgtgctg aaatgacgac
     5221 acctgttgct gttgtagacc cagcaaactt gacaacagaa gaaaaagcag ctgttattga
     5281 acaactcaag aaagacaacg ctgacaacga gaaattgaat gctttgccag atacagcatt
     5341 tacagtaaac gctgatggta ctgtatcagt tgattacagt gctggtaatg cagatgttga
     5401 cgctgtgaaa gacgaggttg ccaatgcaac tgtcaaattg gcagatgaac agaataaagc
     5461 aaaagctgcc atcgacacga aattagcaga agaaaaagct gctatcgaag caaaacgtga
     5521 tgcagatatt gctgaaatta acaacacgcc tggattgaca gacgaccaga agaaagctgc
     5581 gagagatgca gttacagata ctgctggcga tgctttgaaa gctttggata aatcagctga
     5641 cgatgctaag aaagctatcg acgctgagac aaccgttgca ggtatcaaca atgccaagac
     5701 tgacggtgaa aaagccttgg acgatgcaac agtaaacggc gaagcagcta tcgatttgac
     5761 taaggataaa gaactcgcta aagcggatgt tgataaccaa gcaaaagccg ctatcgaagc
     5821 agtcaagaac aatccaaact tggatgcgac cgagcaagca ccatacatca aagcgattga
     5881 ggatgcagca aaagaacaaa aagccgctat cgacgcagcg aaagacactg caggcattac
     5941 agatgcagtt aatgaagctg aaaaagtaaa cgaagagcaa aaacttgcag ccgctaagga
     6001 agatgcgaaa gacaagattg ctgaagaagc cgcagcagct aaagaagcga ttgacaagaa
     6061 tccaaacttg tcaggtgcag agaagactgc agctaaaaat gcggtagata cagaagtagc
     6121 gaaagcaaac gacgctatcg acaaggcgac gactccagaa acagttcaag cagcagaaga
     6181 taacggtgtc aaagctattg atgctgaaga acttgcagca gctaagcaag atgcgaagaa
     6241 caagattgcc aaagatgtag aagcagcaaa tgcagcgat
//
LOCUS       DASFQS010000109         6144 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.113, whole genome shotgun sequence.
ACCESSION   DASFQS010000109 DASFQS010000000
VERSION     DASFQS010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6144
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.113"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..1283)
                     /locus_tag="U1041_001941"
     CDS             complement(<1..1283)
                     /locus_tag="U1041_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013794409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor capsid protein"
                     /protein_id="HEM4769027.1"
                     /translation="MSKLPFDQGDEQFTLEMNQVVDVYHQLSIDLFINVIRRLKKRGT
                     ADLQREPYIWQLEKINDLHMLTESNVKLIASRAEVAESVLRDVISNEGYKVYKDTHEQ
                     LKRDTGQNIEPQRYVVKEALESYANQTTQELGNLINTRLPQSVQNVYKSIIEQTVASV
                     VSGSKSAEQALNDTLTKWSDKGFYGFTDKAGRRWRADTYAKTIIKTTALRVYRDMRER
                     PAEEFGVETFYYSMKSSARAMCSPLQHQIVTKGPAFEADGTRVLSLLDYGYGTAGGCL
                     GINCGHYLTPFIVGVNQKPDLPNHLKGISRRQAEDNARAEAQQRAFEREIRKNKEKLR
                     IAREIGDKELIQKYKLRGLTLEGQYKTYLDDHRFLYRNIKREGYIRNAETYKNTYEVL
                     DNRLKKEYSGILQNLGDRAPKSYSDFKSLSSSERES"
     gene            complement(1276..2763)
                     /locus_tag="U1041_001942"
     CDS             complement(1276..2763)
                     /locus_tag="U1041_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017766970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM4769028.1"
                     /translation="MGIVQSIKNIFLRSKYMVTTDTLTSIVDHPKIAVSHDEYARIQS
                     NLTYYESKWDDVIYQNTAGEKKKRSAQHLPIAKTVSKKLASLVYNEQAEITVNNGETN
                     NFIQEVLLNDRFNKNFERYLESGLALGGLAMRPYIAGNRIRVAFIQAPVFLPLQSNTQ
                     DVSSAAIVTKTTKRKGKSKLYYTLIEFHEWDEEDYYVSNELYRSETPKIVGDRVPLSE
                     LYEDLKERILVKNVSRPLFTYLKTPGMNNKDIDSPLGLSIFDNAKTTIDFLNTTYDEF
                     MWEVKMGQRRIAVPDSMIKMNVQTEDGDIRFVQRFEAEQNVYQMLGTEEKGIGITDLT
                     TPIRADDYIKAINEGLSLLEMQVGVSTGMFTFDGKSMKTATEIVSENSDTYQLRNSIV
                     ALVEQSIKELVVSICELAKGAELYDGDIPELKDIEVNLDDGIFTDRNAELDYWTKALA
                     SGIVSKEYAMKKVLGLADNELKEIIRQINQEKPSSSEVDEELYDE"
     gene            complement(2774..4072)
                     /locus_tag="U1041_001943"
     CDS             complement(2774..4072)
                     /locus_tag="U1041_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002986835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HEM4769029.1"
                     /translation="MVRINKLSEKQKDIIRRPFNYELEVNEGTPRSGKTTAGHFRYAR
                     YLIQSEDENHLIAAYNQEQAYRLFIDGDGTGLMHIFNGNCWIKHDDRGDHLLIDTPKG
                     QKRVYYKGGGKVNSVGAITGMSLGSVVFCEINLLHMDFIQECFRRTWAAKLRYHLADL
                     NPPAPQHPVIKDVFDVQNTRWTHWTMDDNPILSEERKQSIINNLRKNPYLYKRDVLGQ
                     RVMPQGVIYGLFDMDKNIKDTLIGEPVEMYFCGDGGQSDATSMSCNIVTRIRENGRIS
                     FRLNRVAHYYHSGADTGQVKAMSTYAVELKAFIQWCVAKYQMRYTEVWIDPACKSLRE
                     ELHKVGIITRTAMNNSHDVSSKSKGIEVGIERGQNIISDERFVLVEHNEEEYDHYYFL
                     KEVGLYSRDDNGKPIDKDNHAMDEFRYSVNVFVTRYVNFI"
     gene            complement(4059..4601)
                     /locus_tag="U1041_001944"
                     /pseudo
     CDS             complement(4059..4601)
                     /locus_tag="U1041_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000095579.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
     gene            complement(4676..4781)
                     /locus_tag="U1041_001945"
     tRNA            complement(4676..4781)
                     /locus_tag="U1041_001945"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
     gene            complement(4785..4874)
                     /locus_tag="U1041_001946"
     tRNA            complement(4785..4874)
                     /locus_tag="U1041_001946"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4837..4839),aa:Ser,seq:gct)
     gene            complement(4924..5385)
                     /locus_tag="U1041_001947"
     CDS             complement(4924..5385)
                     /locus_tag="U1041_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1492 domain-containing protein"
                     /protein_id="HEM4769030.1"
                     /translation="MNKAKELLNELQNLDMDIQSRIDEINELEAGLLSSPKWTADKVK
                     GGQAKKVDDIYTQLIVMKEAIEQDTNEVINRKLELGRLINKLKNPKHRTILRMTYINK
                     MYVDDICDSMGGMSSPTYYRLKKQAVKELDVILSELIVNDSNGTGMKSKIC"
     gene            complement(5709..6113)
                     /locus_tag="U1041_001948"
     CDS             complement(5709..6113)
                     /locus_tag="U1041_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017643714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769031.1"
                     /translation="MIYKINVDGNEIEYGALVEKSSFTEKEWSAIYAEVVKQNQPVVY
                     EQKKDDTDYINVFGALISLEERYEALLDLLPQEEFSYAGAHPKWVADAVEESTLDKET
                     TKEDVASLLEQCETLEDLKEGLVDYFELEELT"
BASE COUNT         1565 a         1435 c         1121 g         2023 t
ORIGIN      
        1 gactcccttt cagagctact taacgacttg aaatcactat aagacttggg cgctctatcc
       61 cctaaatttt gtagtatacc agaatactct tttttcaacc gattgtcaag aacttcgtag
      121 gtatttttat acgtttccgc atttctgata taaccttccc gtttaatatt acgatacaaa
      181 aatctgtggt catcaagata tgttttatat tgaccctcta gagtcaatcc tcttaattta
      241 tatttttgaa taagttcctt gtcaccgatt tcacgagcaa tacgcaattt ttctttgttc
      301 ttgcgtattt ctctttcaaa ggctcgttgc tgagcttctg ctctagcatt gtcctctgct
      361 tgtcgccggg agataccttt gagatgattc ggtaaatccg gtttctggtt gaccccgaca
      421 ataaacggtg ttaagtagtg gccgcagttt ataccgagac aacctcctgc agttccataa
      481 ccgtaatcta gtaggcttaa caccctagtt ccatctgctt caaacgcagg accttttgtg
      541 acaatctggt gttgcagtgg agaacacata gctctagcgc tagatttcat cgagtagtag
      601 aatgtttcaa ccccaaactc ctctgcagga cgttctctca tatctcgata aactcttagc
      661 gctgtcgttt ttattatagt ctttgcataa gtatctgcac gccaacgccg acctgcttta
      721 tcagtaaaac catagaagcc tttatcactc cattttgtta gagtatcgtt cagtgcctgt
      781 tctgcggact tactacctga taccacgctt gcgactgtct gttcaatgat agacttataa
      841 acgttctgca cactttgagg taaacgagta ttgattagat ttccaagttc ttgcgttgtc
      901 tgattggcgt aagattccag tgcttccttt acaacatagc gctgaggctc tatattttga
      961 cctgtatcgc gttttaattg ctcgtgagta tctttgtata ccttgtagcc ttcattcgaa
     1021 ataacgtcac gtaggacgct ctcagcgacc tccgcacgac tggctatcaa tttcacattg
     1081 ctttctgtca acatgtgcag gtcgtttatt ttttcaagtt gccaaatata cggctctctt
     1141 tgtaagtctg ccgtacctct tttcttcaat ctgcgaataa cattgatgaa caaatcaatg
     1201 gatagctgat ggtagacatc gacaacttga ttcatctcta aggtgaactg ttcatctcct
     1261 tggtcaaacg gtaacttact catcgtagag ttcctcgtct acttcgctag agctaggctt
     1321 ctcttgatta atctgtcgga taatctcctt tagctcatta tcagctaggc ctagaacttt
     1381 tttcattgca tattctttgc tgacgatgcc acttgcaagg gccttcgtcc aataatcaag
     1441 ctcagcattt cggtctgtaa agataccgtc atcaaggtta acttcaatat ctttcagttc
     1501 gggaatatca ccgtcgtaaa gttctgcacc tttagccagt tcgcagatag acacgactaa
     1561 ttcttttata gactgttcca ccaatgcaac tatgctgttt cttaattgat aagtgtctga
     1621 gttttccgat acgatttcgg tggcagtttt catacttttt ccgtcaaagg taaacatacc
     1681 agttgagaca cctacttgca tttctaacaa actcagacct tcattgattg cttttatgta
     1741 atcatctgca cgaatcggag tagtaaggtc tgtaatacca attccttttt cttcagtccc
     1801 caacatctga tagacattct gctctgcttc aaagcgttgg acaaaacgaa tgtctccatc
     1861 ttcggtctgg acgttcatct tgatcatact atcaggcact gctattctac gctgacccat
     1921 cttaacttcc cacataaact cgtcataggt agtattcaga aagtcgattg tagtcttagc
     1981 gttatcaaag atggacaaac caagcggact atcaatatct ttgttgttca ttccgggcgt
     2041 ttttaggtaa gtaaataatg ggcgactaac gtttttaaca agtatcctct cctttaaatc
     2101 ttcgtataac tctgacaaag gaacacggtc tcccacaatt ttaggagtct cagaacgata
     2161 aagctcattt gaaacataat agtcttcctc gtcccattca tgaaattcta tcagggtgta
     2221 atagagtttg gacttacctt ttctttttgt tgttttggta acgatagccg cgctcgacac
     2281 atcttgggta tttgactgca agggtaagaa gactggtgct tgaataaaag cgacacgaat
     2341 tctatttccc gctatgtaag gcctcatagc cagcccccct aaagccagtc cgctttcaag
     2401 atagcgttcg aaattcttat taaatcgatc gtttaataaa acttcctgaa taaagttatt
     2461 tgtttcgccg ttgttaaccg tgatttcagc ttgttcgtta taaaccaaac ttgccagttt
     2521 cttagaaaca gtcttagcta tcggcaaatg ttgggcagag cgctttttct tctcccctgc
     2581 tgtattttga taaataacat cgtcccattt actctcatag taggtcaaat tactttggat
     2641 acgtgcatac tcatcgtgac taacagcaat tttcggatgg tccactatgc tggttaacgt
     2701 atctgttgtt accatgtatt tactcctcaa aaaaatgttt tttatagatt gtacaattcc
     2761 catttatcgt cctctaaata aaattgacat agcgtgtgac aaacacattt acactgtagc
     2821 gaaattcatc cattgcgtga ttgtctttat caataggctt accattatca tcacgactgt
     2881 acaaacctac ctcttttaaa aaatagtagt ggtcgtactc ttcttcgtta tgttctacaa
     2941 ggacaaagcg ttcgtcagat ataatattct gcccacgttc aataccgact tcaatacctt
     3001 ttgatttgct agacacatcg tgagaattat tcatcgccgt tcgggttatg ataccaacct
     3061 tgtgtaattc ttccctcaaa gacttacatg cagggtcaat ccaaacctct gtataacgca
     3121 tttgatactt agcaacacac cattgaataa atgccttcaa ttccacggca tacgttgaca
     3181 tggcttttac ttgtcctgta tcagcaccgc tatgataata atgggcaacg cgattaagac
     3241 ggaaactaat tctgccattt tctcggattc tggtcacgat attacaagac atagaagtcg
     3301 catccgactg accaccgtcc ccacagaaat acatctcgac aggttcgcct atcaaggtat
     3361 ccttgatatt cttgtccata tcaaacaggc cgtagataac accttgaggc atgacgcgct
     3421 gaccaagcac atctcgtttg taaagatatg gatttttgcg taagttgttg atgattgatt
     3481 gtttccgctc ctccgacaaa atagggttat cgtccatggt ccaatgagtc cagcgagtat
     3541 tttgcacatc gaacacatct ttgatgactg ggtgttgcgg agctgggggg ttcaagtctg
     3601 ccaaatgata acgcagttta gctgcccaag tccgcctgaa acactcttgt ataaagtcca
     3661 tgtgcaagag gttaatctca caaaagacca cagaacccaa tgacatacct gtaatagcac
     3721 cgacagaatt gaccttgcca ccacccttgt agtagacacg cttctgacct tttggtgtat
     3781 ctatcagcag atggtcgccg cggtcatcgt gtttgatcca gcaattcccg ttgaagatat
     3841 gcataagacc ggtaccatcg ccatcaataa aaagtcggta agcttgttct tgattgtatg
     3901 cggcaattag atggttctcg tcttcgcttt gaattaagta tctggcgtag cgaaaatgac
     3961 cggccgtggt ctttccgcta cgaggtgtac cttcgttgac ttctaattca taattaaaag
     4021 gacgtctaat gatgtccttt tgcttttcgg ataacttatt aatcctgacc atcgattatc
     4081 tccaataatt tttccatcaa gtgtgtatcc gattgaacgc ccttgatagt ttcaatttta
     4141 agacgtagca actcgttctc ctgtttgatt ttctcgagtt gttcttggat agggtaacgt
     4201 ttcagtaact cgccagcagc tttgataact tctgcgatac taggtttctt ctgcacagtg
     4261 acgtactcgc ctgttacagg gttaagcgtg acaacctctt ccgtcagctc ctgccgaaga
     4321 atagaagtga gaacttgtag gacctcgatt gcggttgcta ttttactgct ttcgagttgt
     4381 ttcaatcgtt cgtctatagc tgattttaag gcaggtttta gcaggttttc ctgcccttgg
     4441 actcgagctg cctttttgct ataccctgct tttatcgctg cctccgtcgc atttccacag
     4501 atgatgtact catcaataaa ttttcgttgt tttatcgtta acttagcaat tttccatcac
     4561 ctccaatcaa aaaagccaca cgattgtgtg actgtatgca tattgggtca gagcgatatg
     4621 caattctctg acctcatcga gccaaggacc tctcaagggt tacttgctct tgacacggga
     4681 acagcaggaa tcgaacctgc acatagcgtt acgccgtgga cgtcacacgg acttgctcag
     4741 ggcgctaccc ttgccaattt ccaatcttgg ctcatgttcc cagaaggaga gtgtgggatt
     4801 cgaacccacg gaccgcacgt aggtggccac ccgtctagca aacgagcgca ttcgaccaac
     4861 tctgccaact ctccatgtca gggaaggctt actgccttac ccttatttct tgatactacc
     4921 attctagcag attttagact tcatgcctgt accgttacta tcatttacta tcaattctga
     4981 aagaatgaca tcaagctcct ttactgcctg tttcttcaaa cggtaatagg taggtgagct
     5041 catgccaccc atactgtcac agatgtcgtc aacgtacatc ttattgatgt aggtcattct
     5101 caagatggtt ctatgtttag gatttttcag cttgttaatc aatctaccta actcaagttt
     5161 cctgttaata acttcattgg tatcttgttc aatcgcctct ttcatcacga tcagctgggt
     5221 atagatatca tcaacctttt tagcctgacc acccttgacc ttgtctgctg tccacttggg
     5281 gcttgagagc aaacctgcct caagctcatt gatttcatct atacggcttt gaatatccat
     5341 atcaagattt tgtagctcat tcaagagctc tttagccttg ttcactctcg tctcctttgt
     5401 ggtataatgt atgtgagtta tttaccacag ccagggcaga gagtgccttg gcttttttta
     5461 tttgccctca acccgcaccg caataggatt ttcggacggt gaatatctaa taattccttt
     5521 ctttatttgc ggtatttccc ttgctttacc acaatccgca agggcaacga ctgtaaagtt
     5581 ttatattttg tggctgacct tactgccatt ggtccaataa tgtgacttta atctacaaag
     5641 gagtcctcct ttttaattta ttttcggcag aatgaccaac cgacctgtga cagtcggata
     5701 gccttagatt aggttaattc ctccaactca aaatagtcaa ccaacccctc tttcaaatct
     5761 tcaagtgttt cacattgttc tagcaaagag gcaacatctt cctttgtcgt ttctttatca
     5821 agggtacttt cttccaccgc atcagctacc cactttggat gggctccagc atatgaaaat
     5881 tcctcctgtg gcagtaagtc cagcaaggct tcatagcgtt cttcaagtga aatcagcgct
     5941 ccgaatacat tgatgtaatc agtatcatct tttttctgct cataaactac tggttgattt
     6001 tgctttacaa cctctgcata gattgctgac cactctttct ctgtaaagct tgatttttca
     6061 accaacgctc cgtattcaat ttcatttcca tcaacattaa ttttgtaaat catattctac
     6121 tccttttgta tttttaattt ttaa
//
LOCUS       DASFQS010000110         6140 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.114, whole genome shotgun sequence.
ACCESSION   DASFQS010000110 DASFQS010000000
VERSION     DASFQS010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6140
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.114"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(7..612)
                     /locus_tag="U1041_001949"
     CDS             complement(7..612)
                     /locus_tag="U1041_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000974722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEM4769032.1"
                     /translation="MAIILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALE
                     KHPEIGEDLVALLSDVEQIPADIRQALINNGGGHLNHALFWELLSPEKTEISAELAAD
                     IDATFGSFDAFKDAFTTAATTRFGSGWAFLVVNKEGKLEVISTANQDTPIMQGLKPIL
                     ALDVWEHAYYLNYRNVRPNYIKAFFEVINWDKVNELYKAAK"
     gene            complement(704..1735)
                     /locus_tag="U1041_001950"
     CDS             complement(704..1735)
                     /locus_tag="U1041_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEM4769033.1"
                     /translation="MLVIEQIEKLKKEKLELLTVLCGEDIGQYQIAKDLLLRKLDFDP
                     ADLGFAYFDMSEADYSQVDLDLVSLPFFSDEKVVILDYFSDLTTDKKRHLTDDELKQF
                     EAYLENPVETTRLIILAPGKLDSKRRLVKLLKRDGLVLEANPLKEMDLKNHFQKEIMR
                     LGLQMGGEVFQYLLVKSNFEFAEVSKNLAFLQSYKGKETIEISDIDAAIPKTLQDNIF
                     DLTQLILQSKVEEARNLVRDLRLQGEEEVKLIAIMLTQFRTYLQVQILVEQGRGEQQI
                     VAELSTIMGRKVNPYQVKYALRDSRHLSIGFLKKVVRLLIETDYQIKTGRFDKDYLFE
                     LTLLKIATS"
     gene            1881..>6140
                     /locus_tag="U1041_001951"
     CDS             1881..>6140
                     /locus_tag="U1041_001951"
                     /inference="COORDINATES: protein
                     motif:HMM:NF019216.1,HMM:NF037372.1,HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4769034.1"
                     /translation="MERKQRFSIKKLSIGVVSICIGFAFLTQGNSTVAAAENSVEVII
                     SNATGEEETIPTQPTETPNNRESIQNTETTIQEEVTVNNTVERQTEAEKSTRTEQAVP
                     ESTTSLNDHLANTEDTTTTSSSTESSVNEVEFPTETTALSSPESSSKIETIDASLKAE
                     QPNTSEGTTALRAATNTSPTTTVSGNDTAIQAIENGSITPSKTIASLNAEEKQTLNNL
                     ILTNFETSADKVALLDVVKPKESLSISDLTKYFVPLIKQLKSDPNYKHLTDQERSAEA
                     TKLALIEANKNLYEDASIEALAPEAKNTFQQLLAFNNGQLLTEKSGLTVETLKNNLSQ
                     LYRGVLYLQQQYSFEKDLPQTLVFTPHTIGNIQADQTSAYDRLMAYGGHITDKRSLAL
                     NLNQIQFNNRMIGQYTGTKSTAELVEKIAQSKGKDVNSYFTEQSQALIGTSPNISIFD
                     LLKTHKPEYILPVLSQGRGVYLAGTSNSLTLGLLDSYTDLYPELKNYSKERGVQQPTS
                     TFFEKILTYQENWLTFLNSAKKDSTTIPFTLAVDTMNVYNETTKAHTWSPNEGTSAHS
                     AVLNFFSPMNLWENYVRSGVGLGGVANGENMIKAYETRFMHSNLSGVALFTHEMTHTN
                     DEARLFGGTYRKEGRRAGQGPEVYARGLFEVIDNTQNGVPGEYKPVFNLNTALTIADS
                     PNRTQALTPQTSTEKLANYTKNLVDLVAYLEAVEARVALKSLAENELAIYFNKVVQVP
                     RNTTSNTSTTTTSLPSSNDAFLPYGQLTAASLTKPTSINDLVDQDAVSGQFIPRGISP
                     ILTELSHNQYDHVPLLESFYGASEAPSGNNTVGDISFKRHAYEILAWKGWDAFISYIS
                     NRYNSDSEAFKAILGNEYSDWASFKKAQYKRLEDKEPVNQLWQTSQLEKELETAIKAD
                     LAVLTTYRNSINSLLNSRSTVTQTQLDQAAQKASVARLATNVRKVKLDILNKALQFNN
                     LEASIFEAPKQSDIIYVKNGGNGQGLTEDTPMGSLAEALQKATDGTIIKLVGNATERT
                     PLVINKAVTIESDSSENAIIFNESIQISNNVTLRNLSIHALTESNVPGNIYIDGQVTM
                     DHVSTLISNRQTDKRPSLIIGSSADTTDKRESSLKILNTNETVFDKMTVQNAADIAIA
                     NGTQIKNGVEVTTPSPVTITSESNQVNKFQAPETNQVTLIFNGSKASNVELNHIANLI
                     LKHPSSISLSSQSITPIQQTLAIENGSRLNLGDLAVHFQSLTGDGILEFTDKGQLSIQ
                     DVSGHATIHFKRNDMDFSASDGKTFVAVASKKDGLSVKLKPLELNLEIDENGNYIYHQ
                     PYSASYYFDTEDSRVLPNEIYDLQPDDKESLDQAIPAPETITVEVPDGEGKWVFDKWE
                     LDSNSTTKRQFYIGYWRYTTSPQTTVRYEEVPFAVDYHADEN"
BASE COUNT         2006 a         1306 c         1102 g         1726 t
ORIGIN      
        1 ctgttcttat ttagctgctt tataaagttc gttaaccttg tcccagttga ttacttcaaa
       61 gaaggctttg atgtagttcg gacgaacgtt tcggtaattt aggtagtaag catgttccca
      121 aacatccaat gccaagattg gtttcaaacc ttgcatgatt ggtgtgtctt ggttagcagt
      181 tgagataact tccaacttac cttctttatt aacaaccaag aaagcccagc ctgaaccgaa
      241 acgagttgtt gctgcagttg tgaaggcatc tttgaaggca tcaaatgaac caaaggtcgc
      301 atcaatatct gctgctaatt cagctgaaat ttctgttttc tctggtgaaa gtaattccca
      361 gaaaagtgca tgattaaggt gaccgccacc gttgttgata agggcttgac ggatatcagc
      421 tggaatttgc tccacatctg acaaaagtgc taccaagtct tcaccgattt ctgggtgttt
      481 ttcaagggct gcattagcat ttgcaacata agttgcatgg tgcttgtcat ggtgcagggt
      541 cattgtttct gcatcaatat gtggttccaa ggcatcgtat gcgtatggaa ggtctggtaa
      601 aataattgcc attttcgttt tctcctatac taagtgatag ttctattcta ctccaatgtg
      661 agagcctttt caattttttt gtctgaaact actaatcaga cacttaactc gttgcaattt
      721 ttaacaatgt aagttcaaac aagtaatcct tatcaaaccg tcctgtcttg atttgataat
      781 ctgtttctat caataatcga acaacttttt tcaaaaatcc aatggacaga tggcgtgaat
      841 cacgcaaagc atactttact tggtatggat tcaccttacg ccccataata gttgataact
      901 cagctactat ctgctgttcc cctcggcctt gctctactag gatttgcact tgtagatagg
      961 ttcgaaattg agttaacatg atggcaatca acttaacctc ttcctcccct tgcaaccgca
     1021 agtcacgaac taaattgcga gcctcctcta ccttggattg tagaattaac tgtgttaaat
     1081 caaagatatt atcttgtagt gtcttgggga tagccgcatc aatatctgaa atttcaatcg
     1141 tctcttttcc cttataagat tgaagaaagg ctaggttttt actgacttca gcaaactcaa
     1201 aattagactt aacaaggaga tattgaaaaa cctctcctcc catctgcaat ccaagacgca
     1261 ttatctcctt ttggaaatga tttttcaaat ccatctcctt cagaggattg gcttctaata
     1321 ctagtccatc tcgtttgagg agtttaacca ggcgtcgttt gctatctaac tttcctggag
     1381 ctaggataat caaacgtgtt gtttcgacag gattttccaa ataagcctca aactgtttaa
     1441 gctcatcgtc cgtcaaatgc cgcttcttgt ctgtggtcaa atcagaaaaa taatccagta
     1501 tgacaacttt ttcgtctgaa aaaaatggga gagaaaccaa atccaaatcc acctgactat
     1561 aatcagcttc tgacatatca aaataggcaa accccaaatc tgcaggatcg aaatcaagct
     1621 tcctcagaag taagtctttc gctatttggt attgtccgat gtcttcaccg cataaaacgg
     1681 tcagaagctc tagtttctct ttttttaatt tttcaatctg ttcaataact aacatgtata
     1741 cctcatattc tgttttcatt ttaccacaaa agcaatgagg ctggcaaagt gtctaacaaa
     1801 atcaattact atactatttg caaaaacgct taatttctgt tatattctag ataactacat
     1861 gaactagaaa aggggaaaat atggaacgga aacaaagatt ttctataaaa aaattatcaa
     1921 tcggtgttgt gtccatttgt atcggatttg catttcttac tcaaggaaac agtactgtag
     1981 cagccgctga aaatagtgtt gaagttatta ttagcaacgc aacaggcgaa gaggaaacca
     2041 tccctactca acctacggaa actcctaaca atagagagag tattcaaaat acggaaacta
     2101 ctattcaaga agaagtcacc gtgaataata cggtcgagag acaaactgag gccgaaaaaa
     2161 gcacccgtac ggaacaagcg gtacctgaat ctaccactag tctgaatgac caccttgcaa
     2221 ataccgaaga caccactaca acttcatctt caacagaaag ctcagtaaat gaagtagagt
     2281 tcccaacgga aactaccgct ctttcctccc ctgaatcatc ctctaaaata gaaactatcg
     2341 atgccagtct aaaagcagag caacctaaca caagcgaagg aacaacagcc cttcgtgccg
     2401 caaccaatac aagccccaca actactgtgt ctggaaatga tactgctatc caagcaattg
     2461 aaaatggaag catcactccg tctaaaacga tagcatctct aaacgctgaa gagaaacaaa
     2521 ctcttaacaa ccttattctc acaaactttg aaactagcgc tgataaagta gctttactag
     2581 atgttgtaaa acctaaagag agtttaagta tttctgattt aacaaaatat tttgttccgc
     2641 ttataaaaca actaaagtcg gatcctaatt acaagcactt gactgaccaa gaaaggtccg
     2701 ctgaagcaac aaaattagcg ctgattgaag caaacaaaaa cctctacgaa gatgcgagta
     2761 ttgaagctct tgcgcctgag gcgaaaaaca ctttccaaca actacttgca tttaacaatg
     2821 gtcagctact tacggaaaaa tcagggctta cagttgaaac tctaaaaaat aatcttagtc
     2881 aactgtatcg tggtgtccta tacctccagc aacaatactc ctttgaaaaa gatttaccac
     2941 aaactcttgt ctttactccc cacacaatcg gtaatatcca agctgaccag acaagtgcct
     3001 atgaccgatt gatggcttat ggtggtcaca ttactgataa acggtcactt gccttaaatc
     3061 ttaatcaaat acaattcaat aaccgtatga ttggtcaata cactggtacc aaatctactg
     3121 ctgaattagt tgaaaaaata gctcaatcta aaggaaaaga tgtaaatagc tactttacag
     3181 aacagtccca agccttgatt ggaacaagcc caaacatctc catctttgac ttattaaaaa
     3241 cccataaacc ggaatatatc ctccctgtcc tctctcaagg tagaggtgtt taccttgcag
     3301 gtactagcaa cagtttgact cttgggcttt tagattcgta tacagacctg taccctgagt
     3361 tgaaaaacta cagcaaggaa cgtggggtac aacaacctac atctactttc ttcgaaaaaa
     3421 tccttaccta ccaagaaaat tggttgactt tccttaactc tgctaaaaaa gatagtacaa
     3481 ctattccatt tacactagca gtcgatacga tgaatgtcta taacgagacc accaaagcac
     3541 acacttggtc acctaacgaa ggcacttctg cacattctgc ggtactcaac ttcttctctc
     3601 caatgaatct ctgggaaaat tatgttcgtt caggagttgg actaggaggt gttgcaaacg
     3661 gtgaaaatat gattaaagcc tacgagacac gctttatgca cagtaacctt tcaggtgtcg
     3721 cactgttcac tcacgaaatg actcatacaa acgatgaggc taggttgttc ggtggaactt
     3781 atcgaaaaga aggtcgacga gctggtcaag gacctgaagt gtatgcacga ggtttatttg
     3841 aagtaattga taatacacaa aacggtgttc ctggtgagta caaacctgtc tttaatttga
     3901 ataccgctct cactattgct gacagtccaa atcgtactca agcattgaca cctcaaactt
     3961 ctacagaaaa gttagcaaat tacacaaaaa atcttgttga tttagtcgct tatttagaag
     4021 ctgttgaagc gagggttgct ttaaaatccc tagcagaaaa tgagttagct atttatttca
     4081 ataaggtcgt ccaagtacct cgcaatacca cttctaacac tagcacgaca accactagtc
     4141 tcccttcttc caacgatgca tttctcccct atgggcagtt gacggctgct tcacttacta
     4201 aaccaactag catcaatgat ttggttgacc aagatgcagt cagtggtcag tttatccctc
     4261 gtggaatttc ccctatccta acggaattaa gtcataacca atatgatcat gtcccacttc
     4321 tagaaagctt ctacggtgct tcagaagctc caagtggcaa taataccgtt ggagatatct
     4381 ctttcaagcg acatgcatat gaaatattgg catggaaagg ctgggatgcc tttataagtt
     4441 acattagtaa cagatacaat agcgactcag aagcttttaa agcaatctta ggaaacgaat
     4501 attcagattg ggctagtttc aaaaaagcgc aatataaacg gttagaagat aaggaaccgg
     4561 ttaatcaatt gtggcaaact agccaattgg agaaagagtt agaaacagct ataaaagctg
     4621 atttagcagt attaaccacc tatcgaaatt caattaacag tctacttaac agtcgttcca
     4681 ctgttactca aacgcagtta gaccaagcag ctcaaaaagc ttcagttgct cggttagcaa
     4741 ctaatgtccg taaagttaaa ttagatattc taaacaaagc tctacagttt aacaatctag
     4801 aagctagtat ctttgaagca ccaaaacaat ctgacattat ctatgtaaaa aatggcggaa
     4861 acggacaagg actgacagaa gataccccta tgggaagttt ggctgaagcc ttgcagaaag
     4921 ctacagatgg tactatcatc aaactggtcg gcaatgccac cgagcgaact ccactcgtca
     4981 tcaataaagc agttaccatt gagagtgata gcagtgaaaa tgcgattatt tttaatgaga
     5041 gtattcaaat ttcaaataac gttaccctac gtaatttaag tattcatgct ttaacagaaa
     5101 gcaatgtccc tggaaacatc tacatagatg gtcaagtgac aatggatcat gtatccactc
     5161 ttatatccaa tcgtcaaact gataaacgcc ctagtcttat cataggttca tcagcagata
     5221 caactgataa gcgtgaatcc agtttgaaaa ttttaaatac aaatgaaact gttttcgata
     5281 agatgaccgt ccaaaatgcc gcagatattg cgattgcaaa tggtacacaa attaaaaacg
     5341 gtgtcgaagt gactacacct tctcctgtta caatcacttc tgaaagtaat caggtcaata
     5401 aattccaagc acctgaaacc aatcaagtaa cccttatttt caatggtagc aaggcaagta
     5461 atgtagaatt aaaccatatc gcaaatctta ttttaaaaca tccttcttct atctcgctaa
     5521 gcagtcaatc gatcacacca atccaacaaa ccttagctat cgaaaatggt agccgactta
     5581 acttgggtga tttagctgtg catttccaat ctcttacagg tgatggaata ttggaattca
     5641 ctgacaaggg gcaattaagt atacaggatg tatctggaca tgccacaatc cattttaaac
     5701 gtaatgatat ggatttttca gcctcagatg gtaaaacatt tgtcgctgtt gcttctaaaa
     5761 aagatgggct ctctgtcaag ttaaaaccgc tagaactcaa tctagaaata gatgaaaatg
     5821 gaaactacat ctaccatcag ccttactctg ctagctacta tttcgatacc gaagatagca
     5881 gagtgttacc aaatgagatt tacgacttgc aaccagatga taaggaaagt cttgaccaag
     5941 ctatcccagc accagaaaca attactgtag aagtgccaga tggcgaagga aaatgggtat
     6001 ttgataagtg ggaattggat tctaatagta ctacaaaacg acaattctat atcggttact
     6061 ggcgctatac gacttcccct caaacaacag ttcggtacga ggaggtgcct ttcgctgtcg
     6121 attaccatgc ggatgaaaac
//
LOCUS       DASFQS010000111         6014 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.115, whole genome shotgun sequence.
ACCESSION   DASFQS010000111 DASFQS010000000
VERSION     DASFQS010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6014
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.115"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            18..1298
                     /gene="aroA"
                     /locus_tag="U1041_001952"
     CDS             18..1298
                     /gene="aroA"
                     /locus_tag="U1041_001952"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEM4769035.1"
                     /translation="MKLRTNVEKLQGKIRVPGDKSISHRSIIFGSLAKGVTRVHDILR
                     GEDVLSTMQVFRDLGVKIEDNGDIVEVHGVGFDGLQAPKNDLDMGNSGTSIRLISGVL
                     AGQDFEATMFGDDSLSKRPMDRVTIPLSQMGVEISGQTERDLPPLTIKGNKNLKPIRY
                     QLPVASAQVKSALIFAALQAEGESVIVEKELTRNHTEDMIVQFGGQLEVNGKEIRIQG
                     GQEFIAQEITVPGDISSAAFWLVAGLIVPGSKIVLENVGINETRTGILDVIKAMGGKM
                     TLSNIDELAKSATITVETSELKATEIAGELIPRLIDELPIITLLATQAHGTTIIRDAE
                     ELKVKETDRIQVVADALNSMGATIEPTEDGMIIHGPTALHGAEINTFGDHRIGMMTAI
                     AALLAKDGEVVLERAEAINTSYPAFFEHLNSLMD"
     gene            1307..1798
                     /locus_tag="U1041_001953"
     CDS             1307..1798
                     /locus_tag="U1041_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEM4769036.1"
                     /translation="MPIVLLGFMGVGKTTTAHLLNLPVYDMDHIIEERIGMPIADYFS
                     LEGEASFRQLETEVLKELLDLPSNCIVSTGGGVIKSEVNRELLLANRENNVLLTASFE
                     VAYQRISKDRQSQRPLFLQCSKEEFEALYRERMALYQGLADTVIDTDKLNPEQVARKI
                     LCK"
     gene            1789..2616
                     /gene="pheA"
                     /locus_tag="U1041_001954"
     CDS             1789..2616
                     /gene="pheA"
                     /locus_tag="U1041_001954"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEM4769037.1"
                     /translation="MQVAYLGPRGSFTHQVAQQGFPTADLQAFETITEVIKAYETGEV
                     TYSVIPVENSIEGSVHETIDYLFHQAEIHAVAEIVQPIAQQLLATSADKAVEVIYSHP
                     QAIAQGKKYIQEHFPQARIEITASTAYAARFVAEHPEQPFAAIAPQAAAVEYGLEVIA
                     QDIQEISENFTRFWILGDKAPSIALEQVAKKVSLALTLPDNLPGALYKAMSVFSWRGI
                     SLTKIESRPLKTALGEYFFILDLDNQSEELLAYSQKELTSLDITYKVLGNYLVYMTS"
     gene            2628..3950
                     /locus_tag="U1041_001955"
     CDS             2628..3950
                     /locus_tag="U1041_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000032347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM4769038.1"
                     /translation="MNKNNNILTHHEQLRLDYLQKNIHYLNDKESRELDYLLYKKELR
                     ERHGSPRQSLRSFTPTAYEDDFEEDYFEEDDEQEELLPRYPERKSRKTRQAKPQRFQS
                     PRIEPKAKVPKPKKARKKGGFKRFIGFVLLAIALVIVAMGYNFFKGMHSVSEKPVAEV
                     FNGVDTSNGTNILILGTDGRVGESSGETRTDTIMVLNVNNTDNKVKLVSFMRDTLVDI
                     EGYEYKLNTAYTLGEQDNQQGAEEVRKVLKNNFDIDIKYYAMVDFATFATTIDTLFPE
                     GVTIDAQFSTINGEVVSSVEVPNDLQLEENAPAYQTIQVGVQQMDGKTLLNYARYRSD
                     DEGDFGRTRRQQEVLSAVMTQAKNPMKLFSGSEAIGKVVAMTPTTVPQSFMWLQGPGL
                     LLDAANGIERVTIPEYGDWIDDYDMYGGMALRVDFEKYQQRLAELGLR"
     gene            4017..5372
                     /gene="rlmD"
                     /locus_tag="U1041_001956"
     CDS             4017..5372
                     /gene="rlmD"
                     /locus_tag="U1041_001956"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM4769039.1"
                     /translation="MLKKNDIVEVEVVDLTHEGQGVAKIDGFVFFVDNALPGEKISMR
                     ILKLKKNIGFGKVEQWQSFSPDRNQDLDLTYLRTGIADLGHLTYPAQLAFKKKQVENS
                     LRKIAGISEMAVADTLGMDNPLAYRNKAAVPVRRVNGQLETGFFRKNSHDLVPIEDFY
                     IQHREIDALVLATRDLLRKLDLKPYDEKEQTGLVRNIVVRRGHYSGQLMLVLVTTRPK
                     IFRVETLIERLTSQFPNLVSIVQNINDQNTNAIFGQEFRLLHGSETIADTMLGNEFEI
                     SAPSFYQVNTEMAEKLYQTAIDFAELSADDVVIDAYSGIGTIGLSFAKQVKHVYGVEV
                     VEKAVLDSQKNAARNGIDNVTYVCDSAESAMQKWVADGVKPTVIFVDPPRKGLTESFI
                     KASTSVKPVKIVYISCNVATMARDIKLYEELGYKLTKVQPTDLFPNTHHIECVALLVK
                     A"
     gene            5763..5933
                     /locus_tag="U1041_001957"
     CDS             5763..5933
                     /locus_tag="U1041_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000873143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombinase"
                     /protein_id="HEM4769040.1"
                     /translation="MKYFEVELENPDEFFKLQTEDFVKANRLLLRKIIQSVTVYEEHF
                     VIAFKSGIEMEI"
BASE COUNT         1867 a         1038 c         1385 g         1724 t
ORIGIN      
        1 atttcgaggt atgagttatg aaattaagaa caaatgtaga aaaattacaa ggaaaaattc
       61 gtgtcccagg tgataaatca atcagtcatc gttctattat ttttggttcc cttgcaaaag
      121 gtgttactcg tgtccacgat attttacgtg gggaagatgt cttgtcaacc atgcaggtct
      181 ttcgtgattt gggtgtaaaa attgaagaca atggtgatat tgttgaagta cacggtgttg
      241 gctttgatgg tcttcaagca ccaaaaaatg atttggatat gggaaattct ggaacctcga
      301 ttcgtttgat ttcaggcgtt ttggcaggtc aagactttga ggcgactatg tttggtgatg
      361 attccttatc caaacgtccc atggaccgag tgactattcc actcagtcaa atgggagtag
      421 agatttctgg acaaactgaa cgtgacctac ctccgttgac catcaaaggg aataagaatt
      481 taaaaccaat tcgctaccaa cttcctgtag cttctgccca agtaaaatca gctctgattt
      541 ttgctgccct gcaggctgag ggagagtcgg tcatcgtaga aaaagagttg actcgaaacc
      601 atacagaaga tatgattgtc cagtttggtg gacagttaga agtcaatggc aaggaaatcc
      661 gcatccaagg tggtcaggag tttattgccc aagagattac agttccagga gatatttcaa
      721 gtgctgcttt ttggttggtt gctggcttaa tcgtaccagg ttcaaaaatt gtccttgaaa
      781 atgtaggaat caatgaaact cggactggta ttctagatgt cattaaagct atgggcggaa
      841 aaatgaccct ttctaacata gatgaacttg caaaatctgc taccattaca gttgaaacgt
      901 cggaattgaa ggctacggag attgcaggcg aattgattcc tcgtttgatt gatgagttgc
      961 caattattac cttactagcg actcaagcac atggaacaac gattattcgt gatgctgagg
     1021 agttgaaagt caaagaaacg gatcgtattc aggttgttgc agatgctcta aatagtatgg
     1081 gagcaactat tgaaccaaca gaagatggta tgattattca cggaccaact gctttacatg
     1141 gtgctgaaat caatacattt ggtgaccacc gtatcggtat gatgactgcc attgccgcct
     1201 tgttggccaa agatggagaa gttgtattgg aaagagcaga agctatcaat actagctatc
     1261 ctgccttctt tgaacactta aatagtttga tggattagga gaacgtatgc caatcgtttt
     1321 acttggattt atgggagttg gaaaaacaac aacagcacat ttgttaaatc tccccgttta
     1381 cgatatggac catatcattg aagaacggat tggtatgcct attgctgact atttcagtct
     1441 tgaaggagag gcttcgttta gacaactgga gacagaggta ctgaaagaat tgctggactt
     1501 acctagtaat tgtatcgtgt caactggtgg tggtgtgatt aaatctgaag taaacaggga
     1561 attgctgttg gcaaataggg agaacaatgt acttcttact gcctcctttg aagttgccta
     1621 tcagagaatt agtaaggata gacagtcgca aagacctctc tttttacagt gtagtaagga
     1681 agagtttgaa gccctctatc gtgaacgaat ggcactttat caaggtttag ctgatactgt
     1741 aatcgataca gataaactga atccagaaca agtagcaagg aaaattttat gcaagtagcc
     1801 tatctaggac ctcgtggttc ttttacacat caagtggccc agcagggctt tccgactgcg
     1861 gatttgcagg cttttgaaac gattacagag gttatcaagg cctacgaaac gggggaagtt
     1921 acctattccg ttattccagt agagaactcg attgaaggta gtgttcatga aacgattgac
     1981 tatctctttc atcaggcgga gattcatgcg gttgcagaga ttgttcaacc gattgcccaa
     2041 caactgttag ccacgagtgc cgataaggct gtagaggtta tctattctca tccgcaggca
     2101 attgctcagg ggaagaaata tattcaggaa cattttcctc aggctcgtat tgaaataaca
     2161 gctagtacag cctatgctgc tcgctttgtg gcagaacacc ctgaacaacc attcgcggca
     2221 attgctccgc aagcggcagc agttgaatat ggactggaag taattgcgca agacatccag
     2281 gaaatcagcg agaattttac acgtttttgg attttggggg ataaggctcc gtctattgcc
     2341 ctggaacaag tagctaaaaa agtcagtctt gcactgacat tgccagataa tctgccagga
     2401 gccttgtata aggccatgtc tgttttctca tggagaggaa tcagcttaac aaaaatagaa
     2461 agccgacccc tgaaaacggc tttgggtgag tattttttca tactggatct ggacaatcag
     2521 tctgaggaat tattagccta ttctcaaaaa gaattgacta gtttagatat aacctataaa
     2581 gtactaggga attacctagt ctatatgacc agctaggatg aagacagatg aataaaaaca
     2641 ataatatcct aacccatcat gaacaattga ggttagatta tttgcaaaaa aatatccact
     2701 acttaaatga caaagaaagt cgcgagttgg attatctatt atataaaaaa gagctgagag
     2761 aacggcatgg aagtccaaga caatctctac gtagcttcac accaacggct tatgaagatg
     2821 acttcgagga agattatttt gaagaggatg atgagcaaga ggaactgttg cctcgctatc
     2881 ctgaacgtaa atccagaaaa acaagacaag ccaaacctca acggtttcag tctcctcgta
     2941 tcgagcccaa agcgaaagta cctaaaccta aaaaagcacg taaaaagggt ggtttcaagc
     3001 gctttattgg tttcgtattg cttgctatag cgctagtgat tgtagcgatg ggctataatt
     3061 tcttcaaagg tatgcatagc gtgagcgaga agccggtagc tgaggtcttc aacggcgtag
     3121 atacatcgaa tgggacaaat attttaattt tgggaacaga cggtcgtgtt ggcgaaagct
     3181 caggtgaaac tcgaacggat accatcatgg ttctaaatgt gaataacaca gataacaaag
     3241 tcaaacttgt tagctttatg cgggatacct tggtggatat tgagggatat gaatataaac
     3301 tcaatactgc ctatactttg ggagaacagg ataatcagca aggggctgaa gaagttcgga
     3361 aggtgttgaa gaataatttt gacattgata tcaagtacta tgcgatggtg gattttgcaa
     3421 cctttgcgac aacgattgat acacttttcc ctgagggcgt aacgattgat gcacagtttt
     3481 caactattaa tggtgaagtc gttagctcag tagaagtgcc gaatgattta cagctggaag
     3541 aaaatgctcc tgcttatcaa acgattcagg tcggtgtaca gcagatggat ggtaagacct
     3601 tgcttaacta cgcgcgctat cgttcggatg atgaaggtga ttttggtcgt acgagacgtc
     3661 aacaggaagt gttatctgct gttatgacac aagctaaaaa tccaatgaaa ctattctctg
     3721 gctccgaagc tataggtaag gttgtggcca tgactccgac aacagtgcca caaagcttta
     3781 tgtggctaca gggaccaggt cttctattgg atgcggcaaa tggtatcgaa cgtgttacaa
     3841 tcccagaata tggagactgg attgacgact atgatatgta tggtggtatg gctcttcgtg
     3901 ttgattttga aaaataccag cagcgcttgg ctgagttagg cctgcgttaa gaaatatggt
     3961 atactagaag tgacttcggt cactttttta gtggtccaaa aatagaaagt agaattatgt
     4021 taaagaaaaa cgatattgtc gaagtagaag ttgtagattt gacacatgag gggcagggcg
     4081 tagcaaaaat tgatggtttt gtcttctttg tagacaatgc tctcccaggc gagaaaattt
     4141 ccatgcgcat cttaaaactt aagaaaaata ttggttttgg taaggtggag caatggcaga
     4201 gcttctcacc agaccgtaat caagacttgg atttgaccta tctaagaaca ggtattgctg
     4261 acttggggca tctcacttat ccagcccaac tagcttttaa gaaaaaacaa gttgagaata
     4321 gtctacgtaa gattgcaggc atttcagaaa tggcagtagc agatacgttg ggaatggata
     4381 atcctcttgc ttatcgtaat aaggcagctg ttccagttcg tcgtgtgaat gggcagttag
     4441 aaacaggatt cttccgaaaa aattcacatg atttagttcc gattgaggat ttttacattc
     4501 aacataggga aattgatgct ttggttctag cgacacgtga cctcttgaga aaattagact
     4561 tgaagcctta cgatgagaaa gaacagacag gacttgtgag aaatattgtt gttcgtcgtg
     4621 gtcattattc aggtcagttg atgctagttt tagttacgac tcgtccgaag attttccgtg
     4681 ttgaaaccct tattgagcgt ctgacaagcc aatttccaaa tcttgtttct atcgttcaga
     4741 atattaatga ccagaatacc aatgctatat tcggtcaaga attccgtctt ttgcatggca
     4801 gtgaaactat tgcagatacc atgttgggca atgaatttga aatttctgca ccgtctttct
     4861 atcaagtcaa cacagaaatg gctgaaaaac tctatcagac cgccattgat tttgcagaat
     4921 tgtcggcaga tgatgtcgtg attgatgcct attcaggtat tgggacaatt ggtctctcct
     4981 ttgcaaaaca agttaagcat gtttacggtg tagaagtcgt tgaaaaggct gtccttgata
     5041 gtcagaagaa tgctgctcga aatgggattg ataatgttac ctatgtctgt gatagtgcag
     5101 aatccgctat gcaaaaatgg gtggcagatg gagtcaaacc gactgtgatt tttgtcgacc
     5161 caccacgaaa aggtttaaca gaaagtttta tcaaagcaag tacttctgta aaaccagtga
     5221 aaatcgtcta tatctcttgt aatgtggcaa ccatggcgcg tgatattaaa ctttatgagg
     5281 aattggggta caaattgacg aaggtacagc cgactgattt atttccgaat acgcatcaca
     5341 tcgagtgtgt tgctctgctt gtaaaagctt agaaaccttt gaacgaaagg gataatgaaa
     5401 gccttgattg caaggctttt tgctttatgg tgggtaagta tcagagtgag aaaatttttg
     5461 gaatgagtag aagtgatagc tagaaattat cagtttctat ttccatttac cctgtgggta
     5521 cgtgtttgtt tccattgaca aggagtttgt gggaatagaa atgtacccac cttgtttgaa
     5581 tcaagtgaag tgtagttgaa ggaaatctgt tgaaagcaat acttcatttt accgaataag
     5641 taataattta ggcaacttca aatcgattaa aaaaaactat tttaaaggtt aagagtagac
     5701 aaaaattgtc cactcttttt tgtaaactca atttatcaat aaatgaaatg agggaatgta
     5761 aaatgaaata ttttgaggtt gagttagaaa atcctgatga attttttaaa ctacaaacag
     5821 aagattttgt gaaagctaat cgcttgctac taaggaagat aatccagagc gttacagtct
     5881 atgaagaaca cttcgtcata gcctttaaat ctggcatcga aatggaaata tgaaaaagtt
     5941 gtgataatat gaagataaac tcacgataaa ttcaagtcaa aagtcagaat tgatatagag
     6001 ttgtaatctt taga
//
LOCUS       DASFQS010000112         5935 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.116, whole genome shotgun sequence.
ACCESSION   DASFQS010000112 DASFQS010000000
VERSION     DASFQS010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5935
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.116"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(54..491)
                     /locus_tag="U1041_001958"
     CDS             complement(54..491)
                     /locus_tag="U1041_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4769041.1"
                     /translation="MTIKAVTERSLPTWTLFASQVWQTSEQVLIEKFSNNEFPFEFLY
                     YSQSEEPIAWISLSLRHDYVEGCQTSPVAYLEGIFISPNYRSQGIAEELLHFAEGWAK
                     SRGISQLGSDAELDNLLSQKFHIKHGFREVSRTVHYVRNLNIE"
     gene            complement(696..1595)
                     /gene="era"
                     /locus_tag="U1041_001959"
     CDS             complement(696..1595)
                     /gene="era"
                     /locus_tag="U1041_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEM4769042.1"
                     /translation="MTFKSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKI
                     MGIYTTEEEQIVFIDTPGIHKPKTALGDFMVESAYSTLREVDTVLFMVPADEKRGKGD
                     DMIMERLKQAKVPVILVVNKIDKVHPDQLLEQIDDFRQQMDFKEIVPISATQGNNVNR
                     LMEILKKNLDEGFQYFPADQITDHPERFLVSEMIREKVLHLTREEIPHSVAVVIESMK
                     RDEFTDKVHIRATIMVERDSQKGIIIGKQGAMLKKIGSMARRDIELMLGDKVFLETWV
                     KVKKNWRDKKLDLADFGYNEKEY"
     gene            complement(1612..2013)
                     /locus_tag="U1041_001960"
     CDS             complement(1612..2013)
                     /locus_tag="U1041_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEM4769043.1"
                     /translation="MDLQENNSKNRWKNRELIASLEFAVTGLFTAFKEERNMKKHLAS
                     AILVVLAGLIFQVSVTEWLFLLLSISLVIAFEIVNSAIENVVDLASDYHFSMLAKNAK
                     DMAAGAVLFVSGFALLTGLIIFVPKIWDFIF"
     gene            complement(1994..2491)
                     /gene="ybeY"
                     /locus_tag="U1041_001961"
     CDS             complement(1994..2491)
                     /gene="ybeY"
                     /locus_tag="U1041_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEM4769044.1"
                     /translation="MYIEMIDETGQVSAQMQEQITELLQFAAEKIGKQNKEMAVTFVD
                     NVRVHEVNLEYRGIDRPTDVVSLEYKPESEIVFDEEDLLDNPELAEMMEDFDAYIGEL
                     YISIDKAREQAEDYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAY
                     GLTRE"
     gene            2590..3402
                     /locus_tag="U1041_001962"
     CDS             2590..3402
                     /locus_tag="U1041_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM4769045.1"
                     /translation="MLETPKNMTAIIEAHLEQMTRLEKHIASYFTQLDPSSADLSQEN
                     TIQQLHISPSALTRFAKKCGFSGYREFVFAFQNNQQYLDKHFEKLQRSLTKKVLVDYE
                     EILTATNNLVDEEKLEEIAKLIDSSKRVYFYGIGSSGLVAMEIKSRFMRLGVVCDAIT
                     DKNNLIWTTNILDQTCLVIGLSLSGQTEEVMEHLQLAAQKGIPTALLTTKSFPHPTFD
                     QIIPVASVRHLNYGNRISPQIPLLIMLDIIYAYFLAIDKEKKENIFKQTIRE"
     gene            complement(3506..5014)
                     /locus_tag="U1041_001963"
     CDS             complement(3506..5014)
                     /locus_tag="U1041_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM4769046.1"
                     /translation="MNFKKFSQLGQAFMLPISILPVAGLLLGIGGALSNSNAVAQFPV
                     LDQAWLQAVFTIMSTAGSAVFANLALIFAIGVAVGLADADKGTAGLSAGVAYLVYTAT
                     ISGFLTLFADKEASIDTGVLGALAIGITVATLHNKYRKIELPAFLGFFGGSRFIPIIS
                     SFAAIAIGSIFYIIWPPIQNLLVDFGKAIAEMGSFGTFLYGFGLRLTGAFGLHHTIYP
                     MFWYTSLGGSEVVAGETIQGAQNIFFAQLADANHTGLFTYGTRFFAGRFATMIFGLPA
                     SCLAMYHAIPKENRKKVGSFYSSSALTSLLTGITEPIEFSFLFVAPWLYVVHAFLDGL
                     SFLVADLLQIRIGNSFSGGLIDYLIFGVFQGNDKTNWIYVIPVGLLWAAVYYLVFKFL
                     VTKFHVLVPGMESSDQASHSEKVLSNGSSLRDNAIAIIDALGGADNIENVTACATRLR
                     VSLRNSGLVDKGVIQSIGATAVLDVKGGIQAIFGGKAILYSQEINQILGLEE"
     gene            complement(5042..5743)
                     /locus_tag="U1041_001964"
     CDS             complement(5042..5743)
                     /locus_tag="U1041_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HEM4769047.1"
                     /translation="MGKISKEALKEQIKDGIIISCQALPGEPLYREEGGIMPLLVKAA
                     QEAGAVGIRANSVRDIKEIKEVTTLPIIGIIKRDYPPQEPFITATMREVDELAALDIE
                     VIALDCTKRERYDGLDIVDFIKQIKKKYPEQLFMADISTFEEGLTAYEAGIDFIGTTL
                     SGYTSYSRQEEGPDIELVDRLCRAGIDVIAEGKIHYPDQVKIIHDLGVAGIVVGGAIT
                     RPKEIAERFISALHK"
BASE COUNT         1822 a         1396 c          997 g         1720 t
ORIGIN      
        1 tacaacacct aatcggcttt cctttcttaa ctaaatgtgt gttagacata attttattca
       61 atattcaaat ttcgaacata gtgaactgtt cggctaactt cacggaagcc atgcttgata
      121 tgaaacttct gactaagtag attatccagt tccgcatcag atcctagttg gcttatacca
      181 cggcttttag cccaaccttc tgcaaaatgc aacagttctt ccgcaatccc ttgactacgg
      241 taattcggac taataaaaat tccttctaaa taggccactg gactcgtctg acagccttct
      301 acatagtcat gacggagcga caaactaatc cacgctatcg gctcctcact ttgagaatag
      361 tacaaaaact caaaaggaaa ctcattattt gaaaatttct ctatcaaaac ttgctcactt
      421 gtctgccaaa cctgacttgc aaagagagtc caagtaggaa gagatcgttc agtaactgct
      481 ttaatcgtca ttatatctca ccgtaacgac ggaaaacacc acaaaagtgg tgcttcacgc
      541 ttgaaattaa ttcatttcta ttctggcgag acaagtcaca ccaggctatc tcgccttcca
      601 atttccaagc tcggtttttc aaatggtcac tttcacattt ctaagtgacc agctgaaaca
      661 gtctattcct agactgtttc actccccgta ccttcttaat attccttctc attatagcca
      721 aaatcggcga ggtcgagttt tttgtctcgc cagtttttct tgaccttgac ccaggtttcg
      781 aggaagacct tgtcgcctag catcagttca atatcacgac gagccatgga accaattttc
      841 ttgagcatgg ctccttgctt gccgatgatg atgcctttct ggctatcacg ctcaaccata
      901 atcgtcgctc ggatatggac cttgtcagta aactcatcac gtttcatgga ctcgatgaca
      961 acggccacag agtgcggaat ttcctcacga gtcaggtgta gaaccttctc ccgaatcatc
     1021 tcagatacca agaaacgttc tgggtggtca gtgatttggt ccgctggaaa atattggaaa
     1081 ccttcgtcta ggtttttctt gagaatttcc atgagtcggt tgacattgtt cccttgggta
     1141 gcagaaattg gcacaatttc cttgaagtcc atctgttgac ggaaatcatc aatctgctcc
     1201 aaaagctggt ctggatggac cttatcaatc ttgttgacaa cgaggataac gggaaccttg
     1261 gcttgtttga ggcgttccat aatcatgtcg tcacccttgc ctcgtttttc atcagctggc
     1321 accataaaga ggaccgtatc cacctcacga agggtgctat aggcagactc caccataaaa
     1381 tctcccaaag ccgtctttgg cttgtgaatt cccggtgtgt caatgaagac aatctgctct
     1441 tcttctgtcg tataaatgcc cataatcttg ttacgggttg tctgagcctt gtcgctcatg
     1501 atggcaattt tttgccccat tacatagttg agaaaggttg atttcccaac gtttggacga
     1561 cctaaaatcg ccacaaaacc tgacttaaat gtcatgtatt ctccttatat tctaaaaaat
     1621 aaagtcccaa attttcggca caaagataat caatcctgtc aacaaggcaa atcctgacac
     1681 aaacaagact gcccctgctg ccatatcttt tgcattcttt gccaacatag aaaaatgata
     1741 gtctgacgcc aaatccacca cattctcaat agccgaattc acaatttcaa aagcgataac
     1801 cagactaata ctgagcaaga ggaagagcca ttctgtcaca gatacttgga aaataagtcc
     1861 cgcaagcact acaagaatag ctgaagcaag gtgcttcttc atattgcgtt cttccttgaa
     1921 agccgtaaac aaacctgtta ctgcaaattc tagactagca atcaattctc ggtttttcca
     1981 gcgatttttt gaattattct cttgtaagtc cataggccgt caaaatttct tcttgtaaac
     2041 caaacatttc tgcctcttct tctggcgtat aatgatcata gccattgata tgcagaaaac
     2101 cgtgtacagc taaaaagccc atttcgcgct cgtagctatg accataatct tcagcttgct
     2161 cacgcgcctt atcgatagaa atatacaatt caccaatata ggcatcgaaa tcttccatca
     2221 tttcagccaa ttcaggattg tccagtaagt cttcctcatc aaaaacaatc tccgactctg
     2281 gcttatattc taggctgaca acgtctgtcg gacggtcaat tcctctgtac tccaagttca
     2341 cttcatgcac acgcacattg tccacaaagg tcacagccat ttccttattc tgcttgccaa
     2401 ttttttcggc agcaaactgg agcaattccg taatctgctc ctgcatttga gcagaaacct
     2461 gccctgtttc atcaatcatt tcaatataca taatcttaca ttccttttac gtttccatta
     2521 tatcataaaa cctatcaatg aggaggtttt agtggtataa tatcctcaga agctattaga
     2581 ggaatgaaga tgttagaaac acccaaaaac atgacagcaa ttattgaagc acatttggaa
     2641 cagatgacaa ggctcgaaaa acatattgcc agctatttta ctcagttaga cccatctagc
     2701 gccgatctta gccaagaaaa cactatacag caactccata tttctccatc tgctcttacc
     2761 cgttttgcca aaaaatgtgg attttccggt tatcgagaat ttgtctttgc ctttcagaat
     2821 aaccaacaat acttggataa acattttgaa aaattacagc ggagcctaac aaaaaaagtc
     2881 ttggtagact atgaggaaat cctaactgcc actaataatc tggtagatga ggaaaaattg
     2941 gaagaaattg ccaagctcat tgacagtagc aagcgtgtct atttctacgg aatcggcagt
     3001 tctggtttgg ttgcaatgga aatcaaatcc cgctttatgc gactgggtgt agtctgtgat
     3061 gctattacag ataaaaacaa cctcatttgg acaaccaata tcctagatca gacctgcttg
     3121 gtcatagggc tctccttgtc cggtcagaca gaagaggtca tggagcatct ccagctggct
     3181 gctcaaaagg ggattcctac tgccctgtta acaactaaga gttttcccca tccaactttt
     3241 gaccaaatca ttccagtcgc ctctgtccgc cacctcaatt acggcaatcg tatctcaccc
     3301 caaattcccc tactcatcat gctagatatt atctacgcct attttttagc tattgacaag
     3361 gagaaaaaag agaatatttt caagcaaact attagagaat aattcatccg tcttgctatt
     3421 tcataacaat cttaataaaa caaaaagcat tcaaaaatac ccgataggta cagtttgaat
     3481 gcttttaatt cgcttaaata taactttatt cttccagacc aagaatttga ttgatttctt
     3541 ggctatacag aatagcctta cctccgaaaa tagcctgtat tcctcctttt acatccaaaa
     3601 cagccgtcgc acctatagac tgaataactc ccttatccac aagaccacta tttctgagcg
     3661 atactcttaa tcgagtcgca caggcagtta cattctcaat attatctgca ccaccaagag
     3721 catcgatgat agcaattgca ttatcacgaa gactagaacc gtttgataaa actttttcag
     3781 aatgtgatgc ttgatcactg ctttccatac caggaactag cacgtgaaat ttggttacta
     3841 aaaatttgaa aactagataa taaactgctg cccaaagcaa gccaacagga atcacgtaaa
     3901 tccaattggt tttgtcattt ccttggaaaa caccaaaaat caagtaatca ataagcccac
     3961 cagaaaatga attcccaata cgaatttgca ggagatccgc cactaagaat gatagtccat
     4021 ctaaaaatgc gtgaacaaca tatagccatg gagcaacaaa caagaaagaa aattcaattg
     4081 gttcagtaat tcctgtcaat agagaagtta atgcactact tgaataaaaa ctgccaacct
     4141 tcttacgatt ttccttagga attgcgtgat acatagccaa acaagatgct ggtagaccaa
     4201 aaatcatcgt tgcaaatcgg ccagcaaaaa atcgagttcc ataagtaaat aagcctgtgt
     4261 gattcgcatc tgctaattga gcaaagaaaa tattttgcgc accttggatt gtctcacctg
     4321 ctaccacttc acttccacct aatgaggtat accaaaacat tggatagatg gtatggtgca
     4381 agccaaatgc acctgtcaaa cgtaatccaa aaccatataa gaaggttcca aaacttccca
     4441 tctctgctat tgccttacca aaatcaacta gcaaattctg aatcggtggc caaattatat
     4501 aaaaaatgga gccaatcgca attgctgcaa atgatgaaat aattggaata aaacgagagc
     4561 ctccaaagaa accaagaaag gctggtaatt caatttttcg atatttattg tgtaaagttg
     4621 caacagtgat accaatcgct aaagcgccca aaactccagt atcaatgctt gcttccttat
     4681 ctgcaaaaag agttaaaaat ccactaatag tagccgtata aaccaagtat gcaactccag
     4741 cagataggcc agcagtcccc ttatcagcat ctgccaaacc tacagcaaca ccaattgcaa
     4801 aaatcaatgc taaattcgca aataccgcac tacctgccgt actcatgata gtgaatacag
     4861 cttgcaacca cgcttgatcc aatacaggaa attgtgctac ggcattacta tttgataagg
     4921 cgcctccaat tcccagtaag agaccagcaa caggcaaaat tgagattggc agcataaagg
     4981 cctgccctag ctgagaaaac ttcttaaaat tcatactcca ttcctttcta taacctattt
     5041 gttatttatg taaagcacta ataaaccgct ctgcgatttc ctttggacgt gtgatcgcac
     5101 cgcctacaac aattcctgcc acacctaaat catgaataat ttttacttgg tcaggatagt
     5161 gtatttttcc ttctgcgatg acatcaatcc cagcacgaca aagtcggtca accaattcaa
     5221 tatctggtcc ctcctcctgc ctactatagg atgtataccc cgaaagtgtt gtcccaatga
     5281 aatcgatgcc tgcttcataa gctgttaatc cttcctcaaa ggttgaaata tctgccataa
     5341 aaagttgttc ggggtatttt ttcttgattt gcttaatgaa atcaacaata tcgagtccgt
     5401 cataacgctc acgcttggta caatcaagag caatgacttc aatatctaga gctgctaact
     5461 cgtctacttc tcgcatcgta gccgtaataa agggctcttg tggaggatag tctcgcttga
     5521 taattccgat aattggtaaa gtagttactt cttttatctc cttaatatct cgtacactat
     5581 tggcccgaat accgacagca cctgcttctt gggcagcctt gactagtaaa ggcataatac
     5641 cgccttcttc ccgatacaga ggttcgcctg gcaaagcctg acaggaaatg ataattccat
     5701 cttttatctg ttcttttaga gcttccttac tgatcttgcc cattaatttc tcctttctat
     5761 tttcggatcc tggatagcgc ttacaatatt attatatagc acataaactt tttttcaata
     5821 ccagttcctc atttaaaatc taatttctat tttgaaagaa aatagtcttc ttttgaaact
     5881 agtttcaaca ttttatacct cttctaaaac tagttttaaa aaacaaaggc catct
//
LOCUS       DASFQS010000113         5919 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.117, whole genome shotgun sequence.
ACCESSION   DASFQS010000113 DASFQS010000000
VERSION     DASFQS010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5919
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.117"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            251..718
                     /locus_tag="U1041_001965"
     CDS             251..718
                     /locus_tag="U1041_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4769048.1"
                     /translation="MTIRKARQSDIPVLNELLQDILQVHHQARPDIFKSTGQKFSEAE
                     LVALLENPDKPIFVFELEGQVVGHLFCELSTATGDVLEPVKTLFIDDLCVANSARGQR
                     IGEQLYEFALSYAKEKGCHNLTLDVWADNAGAVRFYERQGMKPQKFRMEQIIN"
     gene            complement(739..1998)
                     /locus_tag="U1041_001966"
     CDS             complement(739..1998)
                     /locus_tag="U1041_001966"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HEM4769049.1"
                     /translation="MSTFSGFYKKSRQERIDILRQNRSLSEDSLDILYKDENLPEAIA
                     GKMAENHLGTFSLPFSVLPELLVDGQTYSVPMVTEEPSVVAAASFGAKIIAKSGGFTT
                     TIHNRIMIGQVALYDISDHSRATQAILDQKESILETANQAHPSIVKRGGGARELTVES
                     KDEFLIVYLQVDVQEAMGANILNNMLEAVKDDLEELSKGQALMGILSNYATESLVTAQ
                     CHIAIPSLATSSAIAQETAQKIALASKLAQVDPYRAATHNKGIFNGIDAVVVATGNDW
                     RAVEAGAHAYASRDGQYKGLSTWSINGEHLVGSITLPLPIASVGGSIGLNPKVAVAFD
                     LLQQPKARQLASIIASVGLCQNFAALRALVTSGIQAGHMKLHAKSLALLAGAEEHEVD
                     QLAQLLRKEKHSNLETAQNLLAKMREH"
     gene            complement(2060..3214)
                     /locus_tag="U1041_001967"
     CDS             complement(2060..3214)
                     /locus_tag="U1041_001967"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HEM4769050.1"
                     /translation="MNIGIDKIGFAAPDYVLDLADLAQARNVDPNKFKIGLLQSEMAV
                     APVTQDIISLGAKAAEAILTEEDKQTIDMVIVGTESSVDQSKAAAVTIHGLLGIQPFA
                     RSIEMKEACYGATAGLSLAKSHIAQFPESKVLVIASDIAKYGVASGGEPTQGAGAVAM
                     LVTANPRILVLNNDNVCQTRDIYDFWRPNYDKYPRVDGKFSTEQYTDCLTTTFDYYQQ
                     KTSKTLNDFAAMCLHIPFSKQGLKGLQAIAQDEETLSRLTERFQEAIVYNKVVGNIYT
                     GSIFLSLLSLLENSRALETGDQILFYSYGSGAVCEIFSGQLVEGYHDHLQENRLEQLN
                     QRTKLSVKEYEQVFFEEITLDETGSSLDLPEDQSPFALIKVDNHKRIYRK"
     gene            complement(3243..4427)
                     /locus_tag="U1041_001968"
     CDS             complement(3243..4427)
                     /locus_tag="U1041_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEM4769051.1"
                     /translation="MKKVAIVSAYRSAIGSFGGSLKDIEIADLGAQVLETALASKNIP
                     ADSVDEVIFGNVLSAGQGQNIARQIAIRAGIPQTASAYAVNKVCGSGLKSVLLAAQSI
                     MLGDNDVVVAGGIEIMSQAPYLSKTSRFGSKFGHITLEDSMLTDGLTDAFNDYHMGIT
                     AENVAEHYQVSRAEQDAFTYSSQEKAAKAIAEGRFVDEIVPIRLKNRKGETIFATDEY
                     PRLTPIEKLATLRPSFKKDGTVTAANASGINDGCAVLVLMSDEKASELNIQPLAYIEA
                     YATSGLDPALMGLGPITASQKALQKLNKTVEDIDLFELNEAFAAQSIPVVKQLGIDPA
                     KVNVNGGAIALGHPIGASGSRILVTLIHELIKQEKELGLCSLCIGGGQGISLIVSNAQ
                     TS"
     gene            4653..5345
                     /locus_tag="U1041_001969"
     CDS             4653..5345
                     /locus_tag="U1041_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase"
                     /protein_id="HEM4769052.1"
                     /translation="MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIK
                     EAGIEFDLAFTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGLNKAEAA
                     AEFGDEQVHIWRRSYDTLPPEMAKDHEYSAHTDRRYAHLDDSVIPDAENLKVTLERAL
                     PFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFELDE
                     NLNIVKEYYLEA"
     gene            5451..5834
                     /locus_tag="U1041_001970"
     CDS             5451..5834
                     /locus_tag="U1041_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4769053.1"
                     /translation="MASKKMLHACLRVENLEASQKFYEEGFGFKETRRKDYPEHKFTL
                     VYLALEGDDFEIELTYNYDHGPYIVGDGFSHLALSSDDLEGDNAKHKELGYPTTDIKG
                     LPGSPGRYYFVTDPDGYRVEVIRAD"
BASE COUNT         1666 a         1165 c         1349 g         1739 t
ORIGIN      
        1 atcaaggcaa gttgacaacg gataattttg attttcgaag agtattagta attttctaca
       61 ctacacattc tcgttttaag acaacaaaaa accagccttg ggcagctgat tttttaggag
      121 atttatgaaa aattttagga tacacctata gtatactcga attttcagat tcttcatcgg
      181 tctgtagacc tattttgtta aaaaataaac atgtgctata atagaaaaaa taaaaaaggg
      241 gagatttttt atgacaatcc gtaaagccag acaatctgat attccagttt taaatgaatt
      301 attacaagat attttacagg tgcaccacca ggcacgacca gatattttta aaagtacagg
      361 tcaaaaattt tctgaggctg aattagtagc acttttggaa aatccagata agcctatttt
      421 tgtctttgag ttagagggac aagtggttgg gcatcttttt tgtgaattat ctaccgcaac
      481 aggcgatgtt ttagaaccag ttaaaacctt gtttattgat gatttgtgtg tagccaattc
      541 tgcgcgtggt caaagaattg gcgagcagct ttatgaattt gctctttcct atgctaagga
      601 gaaagggtgc cacaatctta ccttggatgt atgggctgac aatgcaggag ctgtccgttt
      661 ttatgaacgc caaggaatga aaccacaaaa gttccgtatg gagcaaataa taaattaaaa
      721 aagaggaagt ccctcttttt aatgttctct catttttgct aataagtttt gagcagtttc
      781 taggttgctg tgtttttctt tccgcaggag ttgggctagt tggtctactt catgctcctc
      841 ggcgccagca agtagcgcta gggattttgc gtggagcttc atgtgaccag cctgaatccc
      901 tgaagtaaca agagcacgca gggcagcaaa gttctgacag agaccgacag aagcgatgat
      961 agaagctaat tggcgtgcct ttggttgttg gagaaggtca aaagcgactg ctacctttgg
     1021 attgagcccg atagagccac cgacggaggc aatcggaaga ggtagggtga tggagccgac
     1081 caagtgctcg ccattaatgg accaagtaga aagccccttg tattgcccat cacggctggc
     1141 ataagcatgg gccccagctt cgactgcccg ccagtcattt cctgtagcga caacgacagc
     1201 atctatacca ttaaaaatcc ccttgttatg tgtcgcagca cgataagggt ccacttgcgc
     1261 cagtttgctt gctagggcta ttttttgagc agtttcttga gcaatggcag agctggtagc
     1321 cagactaggg atggcaatat ggcattgggc ggtaaccagt gactccgttg catagttgga
     1381 gaggattccc atcaaagcct gtcccttgct gagctcttct aagtcatcct taacagcttc
     1441 taacatgtta ttgaggatat tggctcccat ggcttcttgt acatcaacct gaagatagac
     1501 aatcaaaaac tcatccttac tctcaacagt caattctctt gcaccacccc ctcgtttgac
     1561 aatggaaggg tgtgcttgat tggcagtttc taaaatactc tccttctggt caagaatcgc
     1621 ctgggtcgct ctgctatggt ccgaaatatc gtagagagca acttgtccaa tcatgatacg
     1681 gttgtgaata gtcgttgtaa aaccgccaga tttagcgatg attttggctc cgaaagatgc
     1741 agctgcaacc acagaaggtt cttcagtaac catcggtaca gagtaagttt gtccatccac
     1801 tagaagttct ggaagtacag aaaaaggtaa ggaaaacgtt cctagatgat tttctgccat
     1861 ctttcccgca attgcttctg gcaggttttc gtctttgtat agaatgtcta agctatcttc
     1921 ggatagggaa cgattctgac ggagaatatc aatgcgctct tggcgtgatt ttttataaaa
     1981 tccggaaaaa gttgacatag gttcctcttt ctataggaaa gcgccccttg gtgagagcca
     2041 aagggcgccg ttttggcttc tatttacgat agatacgttt gtgattgtcc actttgataa
     2101 gggcaaaggg actttggtct tctggtaggt caagggatga accggtttca tcaagggtaa
     2161 tttcttcaaa gaagacttgt tcatattcct taacgctgag ttttgtacgc tgattgagtt
     2221 gttctaaacg attttcttgt aagtggtcgt gataaccttc aacgagttga ccgctgaaaa
     2281 tttcacagac agcgccgcta ccatagctat aaaagaggat ttgatcccct gtctctaacg
     2341 ctctgctatt ttccaaaagg gaaagaagag agaggaagat agagccagtg tagatgttgc
     2401 cgacgacttt attatagacg atagcttcct ggaaacgttc tgtcaagcga ctaagagttt
     2461 cttcatcctg agcaatagct tgcaatcctt taagaccttg tttggagaaa gggatatgta
     2521 agcacatggc agcaaaatcg ttgagggttt tgcttgtttt ttgttgatag tagtcgaaag
     2581 ttgtcgtcaa gcaatcggtg tactgttcag ttgaaaattt accatcaaca cgtggatatt
     2641 tgtcgtagtt gggacgccag aagtcgtaga tgtcacgtgt ctggcagaca ttatcattgt
     2701 tgaggaccaa aattcgtggg tttgcggtta ccaacatggc aactgcacca gcaccttggg
     2761 taggttcacc gccagaagcg actccatatt ttgcaatatc actagcaatg actaggactt
     2821 ttgattctgg gaattgagcg atatggcttt tggcaagact tagtccagct gttgcaccgt
     2881 aacaagcctc cttcatctcg atggagcgag cgaagggctg aataccgagt aatccatgaa
     2941 tggtgacggc ggcagcttta ctttgatcta cgctagattc tgtaccgaca ataaccatgt
     3001 caatggtttg tttatcttct tctgtcagaa tggcttcggc agcctttgcc ccaagactga
     3061 taatatcttg agtgacagga gctacagcca tttcagactg aagaagacca atcttaaatt
     3121 tatttgggtc cacattgcgg gcttgggcta aatcagccaa atctaaaaca taatcgggtg
     3181 ccgcaaatcc gattttatca ataccgatgt tcataatata tcctttgtgt acaaatgata
     3241 ggttaacttg tttgcgcatt ggaaacgatt agggagatgc cttgaccgcc tccgatacaa
     3301 agtgagcaaa gaccaagctc tttttcttgc ttgattaatt cgtgaatcag agtgactagg
     3361 attcgactac cactagctcc gattggatgt ccaagggcga tggcaccacc attgacattg
     3421 acttttgcag gatcaatgcc gagttgtttg acaactggaa ttgattgggc tgcgaaagct
     3481 tcattgagtt cgaatagatc gatatcctcg actgttttat tcagtttttg tagcgctttt
     3541 tggctagcag taataggtcc aagccccatc aatgcgggat ctaaaccgct tgttgcgtat
     3601 gcctcaatat aggcgagtgg ctggatattt agctcactgg ctttttcatc agacatgagt
     3661 accaagacag cacagccgtc gttgatgcca gaagcattgg ctgcggtgac ggttccatcc
     3721 tttttaaaag atggccgaag tgttgccaat ttttcaattg gcgtcagacg agggtactca
     3781 tctgtggcaa aaatagtttc gcctttccga ttttttaatc taataggaac aatttcgtca
     3841 acaaatcttc cctcagcaat agcttttgca gccttctctt ggctactgta tgtaaaagca
     3901 tcttgctctg cgcgactgac ttgatagtgt tcagcaacat tttctgcagt aatgcccatg
     3961 tgatagtcgt tgaaggcatc tgttagaccg tctgtcagca tagaatcttc tagagtaata
     4021 tgaccaaatt tactaccaaa ccggctagtt ttggatagat aaggtgcctg gctcataatt
     4081 tcaatgcctc cagccacaac tacatcattg tcacctagca tgattgactg ggcagccagg
     4141 aggactgatt tgagaccgga accacagact ttattgactg cataggcaga ggctgtctga
     4201 ggaatgcctg cacgaatagc aatttgacgt gcaatatttt gtccttgtcc tgctgaaaga
     4261 acatttccga agataacttc atcaacgctg tctgcaggga tgtttttact agctaaggct
     4321 gtttcgagga cttgcgcccc taaatcagcg atttcaatat ctttcagact acctccgaaa
     4381 ctgccgatgg cagaacgata ggcagacacg atagctactt ttttcatgat aactcctata
     4441 gtggtatcgt tttgaactgt cgtgttcagc cttactatta taccattatt ttgtattttt
     4501 tctaagaaga aagataggtc tagagactga atttacatga aagaacaatg aaagcgtaca
     4561 cagattgtgg aaaggctggc atttttttac cttttcgtgt aaaatagaga agtataagag
     4621 gggaacctca aaatttaaag gagaatccat aaatggtaaa attggttttt gctcgccatg
     4681 gtgagtctga atggaacaaa gctaaccttt tcactggttg ggctgatgtt gatttgtctg
     4741 aaaaaggtac acaacaagca atcgatgcag gtaaattgat caaagaagca ggtatcgaat
     4801 ttgaccttgc tttcacatct gtattgaaac gtgctatcaa gactacaaac ttggctcttg
     4861 aagctgcaga tcaattgtgg gtaccagttg aaaaatcatg gcgtttgaac gaacgtcact
     4921 acggtggttt gactggcttg aacaaagctg aagcagctgc tgaatttggt gatgagcaag
     4981 ttcacatctg gcgtcgttct tatgatactt tgccaccaga aatggctaaa gatcatgagt
     5041 attcagcaca cactgaccgt cgctatgcac accttgatga ttcagttatt ccagatgcag
     5101 aaaacttgaa agtaacgctt gagcgtgccc ttccattctg ggaagataaa attgctccag
     5161 cattgaaaga cggtaaaaac gtattcgtag gtgcacacgg taactcaatc cgtgcccttg
     5221 taaaacacat caaacaattg tctgatgacg aaatcatgga tgtggaaatt ccaaacttcc
     5281 caccacttgt attcgaattg gatgaaaact tgaacattgt gaaagagtac tacttggaag
     5341 cataattcat ttaaggcctg agttcgctca ggctttttta gttttgaata tcggattttt
     5401 catagagagt atggtatact ggtggtatta aatggtagga ggaatttatt atggcaagta
     5461 aaaaaatgtt gcacgcttgt ttgcgtgttg agaatttaga agcatcgcaa aagttctatg
     5521 aagaagggtt tggctttaaa gaaacccgtc gcaaggacta tccagagcac aagtttacct
     5581 tggtttactt agcacttgaa ggagatgact ttgagattga attgacctac aattatgatc
     5641 atggtcccta tatcgtaggc gacggtttct cgcatctagc tctttcttca gatgatttag
     5701 aaggggacaa tgcgaaacat aaggagctgg gctatccaac gacagacatc aagggcttgc
     5761 caggaagtcc aggtcgttat tattttgtga cagatccaga tggctaccgt gtggaagtca
     5821 ttcgtgcaga ttaatttaga aaagattgct taggcagtct ttttcttttc aaaaaaatca
     5881 gaaaatggca ggagggaatt aggaagcaaa tcaattatt
//
LOCUS       DASFQS010000114         5906 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.118, whole genome shotgun sequence.
ACCESSION   DASFQS010000114 DASFQS010000000
VERSION     DASFQS010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5906
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.118"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            259..1260
                     /locus_tag="U1041_001971"
     CDS             259..1260
                     /locus_tag="U1041_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4769054.1"
                     /translation="MLKNKNLLATIVALTVMVVAALFLTQKEQNNSTNSSEKVKIGVL
                     QFVTHDSLDEIYKGIKAGLKEGGYTTTDNLEIDFMNAEGDQSQVQTMSKKLVDNGNEL
                     LIGIATPTAQGLANATTELPIIMGAVTDPVGANLVTDLKNPGGNITGVSDQTPVADAV
                     SLIKEITPNAKTIGILYSSNEDNSKIQVAEFKAAAEEAGYTVLEYAVASSNEIAATVE
                     VASSKADVLFTPVDNTVASAFSTVVSVANKTKTPIFTSVEDMVEGGGIASVTLSQYDL
                     GVATGKMAAKILDGANPADTPVQIFNEGTVVVNQKVAKELGITLSDDVISKASKVIE"
     gene            1283..2149
                     /locus_tag="U1041_001972"
     CDS             1283..2149
                     /locus_tag="U1041_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4769055.1"
                     /translation="MIVSTVSQALLWAVLGLGIFVTFRILNFPDMTTEGSFPLGGAVA
                     VTLLTQGVHPVLATLAAVLAGCLAGLVTGLLYTKGKIPTLLAGILVMSSCHSIILFIM
                     GRANLGLLNTSRLQDLLPFSEQVNGLLLGLGSVALVIGALMFFLYTRLGQAFIATGDN
                     PDMARSFGINTSRMELLGLILSNGIIALAGALIAQQEGYADVSRGIGVIVVGMASLII
                     GEVLYGNLTMLERFLAIAVGAIFYQFLILVVISLGINTSYLRIFSAMILAVCLMVPEL
                     KNKILKGASLSR"
     gene            2146..2904
                     /locus_tag="U1041_001973"
     CDS             2146..2904
                     /locus_tag="U1041_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4769056.1"
                     /translation="MKAIVELKNATKVVTNGFDEERVILDNVNLTIYQGDFITILGGN
                     GAGKSTLFNVIAGTLPLTSGSVHILGEDVTNWPAEKRAKYLARVFQDPKMGTAPRMTV
                     AENMLIAKYRGEGRGLVPRRLAQQTEEFAQLLPRVGNGLEKHLDTPAGLLSGGQRQAL
                     SLLMASLKQPELLLLDEHTAALDPKTSQSLMQLTDELIETKGMTALMVTHQMEDALRH
                     GNRLIVMKNGQIIQDQTAEEKSKMKLEDYYKLFD"
     gene            3087..3572
                     /locus_tag="U1041_001974"
     CDS             3087..3572
                     /locus_tag="U1041_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HEM4769057.1"
                     /translation="MDKLVFKSLADLGMDYTIVEHPPALTTEEADRYIEGLEGVRTKS
                     MFLTNKKKTAFYLLIMDDQKQLDMDQFRDLVGANRIRMASSESLMEKMHLPAGVVSVF
                     GLLHNVDKDIQVFFDKEILSEPILTFHPNVNTKTIFVKTEDVLRFVEEIGFSATIVDL
                     G"
     gene            3578..3982
                     /locus_tag="U1041_001975"
     CDS             3578..3982
                     /locus_tag="U1041_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769058.1"
                     /translation="MRKCLAICSLLCCLFLVGCRTGAAYQAKIEPMESSELYTEKEIE
                     AAILVVQDYFDHHFNRCKLLTIGYSGDNEKEFDEWAEHYGAEEAIILTSSFKVAAEGA
                     EPTLEPNSTHTDWKWILVRNVGGKWEHKGHGY"
     gene            4238..5899
                     /locus_tag="U1041_001976"
     CDS             4238..5899
                     /locus_tag="U1041_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM4769059.1"
                     /translation="MSTIKIMALGGVRENGKNLYIAEVNEHIFILDAGAKYPENEQLG
                     VDVVVPNFDYLEENKHRVAGVFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLL
                     VKGNNATKKFNDFHVINAETEIDFGDSVVSFFQTTHSIPESLGIVVKTDGGNIVYTGD
                     FKFDQAADKFYRTDFGRLAEIGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIAD
                     CDGRVIVAAVASNIVRIQQIFDAAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERL
                     LVKPKDMNKYEDHELIILETGRMGEPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSIS
                     KEAVVARVENLIYKAGGTVKSITKKLRVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQ
                     LDAHAKAALEIGMYPENIIIVKRGDVMAFEEGDFVHSGAVPAGDVMIDGNAMGDVGNI
                     VLRDRKILSEDGIFIVAITVNRREKKIISKAKVNTRGFVYVKKSKDILREASELVNTT
                     VENYFTKDSFDWTELKSAVRDDLAKFLFDQTKRRPAILPVIMEVK"
BASE COUNT         1705 a         1047 c         1436 g         1718 t
ORIGIN      
        1 aggattctag acaattccca taagtgaggt ggcaccgtgt cattgacgcc ctcgcatact
       61 gtttttcagt atgcgggggc tttttccttg tctttgtaga ttgtcgttca attgaaaaaa
      121 tgagataccg atcattatat tctactttga caatgataga aattacgagg taatcatgat
      181 gaaacgatgg cgatggtgga ataatatatt gatgacgtag aaattggata ttgtgcattt
      241 ttaaaaggag aatgaaatat gttgaaaaat aaaaatttac ttgctacaat tgttgccctt
      301 actgttatgg tagttgctgc cctgtttttg acgcaaaaag aacagaacaa ttcaacgaat
      361 agctcagaaa aagttaaaat tggggtcctc caatttgtga cgcatgattc actagacgaa
      421 atttacaagg gaatcaaagc aggccttaaa gaaggtggtt ataccacaac ggataattta
      481 gaaattgatt ttatgaatgc agaaggtgat caatcccaag ttcaaaccat gagtaaaaaa
      541 ttggtggaca atggcaatga actcttaatc ggtattgcga cgccaaccgc acaagggttg
      601 gcaaatgcaa caacagaatt acctatcatc atgggggcag taacagatcc tgttggtgca
      661 aacttggtga cagacttgaa aaatcctggt ggaaatatca caggtgtttc tgaccaaaca
      721 ccagtagcag atgctgtttc tcttatcaag gagattacac caaatgctaa aacaatcggt
      781 attctctact cttcaaatga ggacaattca aaaattcaag tagcggaatt taaggcagca
      841 gcagaagagg ctggctatac tgttcttgaa tatgcagttg cttctagtaa tgaaattgca
      901 gcgacagtag aggtcgcaag tagtaaagca gatgttctct ttacaccagt agacaacaca
      961 gttgcctcag cattttcaac tgtcgtatct gtggcaaata aaaccaaaac tccgattttc
     1021 accagcgtag aagatatggt agaaggcgga ggtatcgcat ctgttaccct tagccaatat
     1081 gacttgggtg tggcaactgg taagatggct gcgaaaattc ttgatggtgc caatccagcg
     1141 gatacacctg tacaaatctt taacgagggt accgttgttg tcaaccaaaa agttgctaaa
     1201 gaattaggaa ttaccttgtc agatgatgtg attagtaaag caagcaaggt tatcgaataa
     1261 gagataagag aaaaggaaaa atatgattgt atcaacagtt tcacaggctc ttttatgggc
     1321 tgtactaggt ttgggaatat tcgttacctt tcggattctg aattttcctg atatgacgac
     1381 agagggctct ttcccgcttg gaggagcggt tgctgttacc ttattgacgc aaggagttca
     1441 tcctgtcttg gcaacgctag cagccgtttt ggcaggctgt ttggcaggat tggttacggg
     1501 cttgctctat accaagggaa aaattcctac tctattggca ggtatcttgg tcatgtcttc
     1561 ctgtcactcc attattctct ttatcatggg acgggcaaat ttgggcttgt taaataccag
     1621 tcgcttgcag gacttgcttc ccttttccga gcaagtaaat ggtctcttgc ttggtctggg
     1681 aagtgttgcc ctagtcattg gagccttaat gttcttcctc tatacccgcc tgggtcaagc
     1741 ctttatcgcg acgggggaca atccagatat ggctcgcagt tttggtatca atactagcag
     1801 aatggaactg cttggcttga ttctttctaa tgggattatt gcccttgcag gtgccttgat
     1861 tgcacaacaa gaaggctatg cggatgtatc acgtggtatt ggtgtcattg tggtcggtat
     1921 ggctagcttg attatcggtg aggtcttgta tggaaatttg accatgttgg aacggttctt
     1981 ggccattgca gtgggtgcca tcttctatca gttcttgatt ttggtggtta tttccctcgg
     2041 tatcaatacc agctacctcc gtatcttctc agccatgatt ttggcagtct gcctcatggt
     2101 tcctgagttg aaaaataaaa tcttgaaagg agccagcctg tcacgatgaa agcaattgtt
     2161 gaattaaaaa atgccaccaa ggtggtgacc aatggttttg atgaagagcg cgtgattttg
     2221 gacaatgtca atttgaccat ctaccaaggg gattttatta ccattttagg tggcaatggt
     2281 gctgggaaat caactctctt caatgtcatt gctggtaccc tgcccttgac aagtggttcg
     2341 gtccacatac ttggtgagga tgtgaccaac tggcctgctg aaaaacgggc taagtatctg
     2401 gctcgtgtct tccaagatcc taaaatggga actgctccgc ggatgacagt ggcagaaaat
     2461 atgctcatcg ccaagtatcg tggtgagggg cggggcttag tgccacgcag attggcccaa
     2521 cagacggaag aatttgccca gcttttgccg agagtgggaa atggtctaga aaaacatctg
     2581 gacacgccag caggactttt atcaggtggt caacgtcagg ccttgagttt gttgatggcg
     2641 agtttgaaac agcctgaact tttactcttg gatgagcata ctgcagccct cgaccctaag
     2701 accagccaat ccttgatgca attaacggac gagttgattg agaccaaggg aatgacggcc
     2761 ctcatggtca ctcaccagat ggaagatgct ctgcgtcacg gtaatcgctt gattgtcatg
     2821 aaaaatggtc agattattca ggaccaaacg gctgaagaaa aatccaagat gaaactggaa
     2881 gattattata agttgtttga ttaagaacct gtgtggatag ttcgcaactt ccaaccaagt
     2941 ttggttttgg ctaaaactga atcttatatc aaacacatca cttgtgaata caggtctaaa
     3001 gtctggagta atccaggctt ttattatcct ttgaattttt agttaaaaag cagtataata
     3061 tactaaatat atcaagaggt gctgtcatgg ataaattggt ttttaaaagc ttagctgact
     3121 tgggaatgga ctacactatt gttgaacatc caccagctct gacaactgag gaagcagacc
     3181 gttacattga agggttagaa ggagtacgga ccaagtccat gtttctgact aataagaaaa
     3241 agactgcatt ttatttactg attatggatg accagaagca gctagatatg gaccaatttc
     3301 gtgatttggt gggcgccaac cgcattcgga tggcctcgag tgagagcttg atggaaaaaa
     3361 tgcacttacc tgcgggtgtg gtatctgttt ttggcttgtt acataatgtt gataaggata
     3421 ttcaagtctt ttttgataaa gaaatccttt ctgaacccat tctaaccttc caccccaatg
     3481 ttaatacgaa gacaattttt gtaaagacag aggatgtttt acgttttgtc gaagagattg
     3541 gcttttcagc aacgattgtt gacttggggt aacaaagatg agaaaatgtt tagctatttg
     3601 tagtctgttg tgttgtcttt ttttggtagg atgccggaca ggagcagctt atcaggcaaa
     3661 aattgagccg atggaatcat cggaattata cacggaaaaa gagattgaag cggctattct
     3721 tgtagttcaa gattactttg atcaccattt taacagatgt aaattgctga ctatcggtta
     3781 tagtggtgat aatgaaaagg aatttgatga gtgggcggag cactatggtg cagaggaagc
     3841 tattatccta acttcgtctt ttaaggtagc agctgagggg gcagagccca ccttagagcc
     3901 taatagtacc catacggatt ggaaatggat tttagtgcgg aatgttggtg gtaagtggga
     3961 acataaggga catggttact aatgtatatg tagaacttcg ttgattttca gcggagtttt
     4021 ttgtaaattt tcttgaaaaa atgtataata gaagcgatag ctatttaggt atttctattt
     4081 aaaagttgcg ttgatggttg aatataattt tgaaccaacg tgtgtctttt gcaaatagag
     4141 ctccgacata gcagactgta attcgacttg ggcatcccaa ggaccgttgg taagaaaaat
     4201 aaaatggaca cctgtgggat gtccaaaagg agtaaagatg agtacaatta aaattatggc
     4261 tcttggaggt gtgcgggaaa atggaaaaaa cctgtacatt gccgaagtga atgaacatat
     4321 ttttattttg gatgcagggg caaagtatcc tgagaatgaa cagttaggtg tggatgtagt
     4381 cgtcccaaat ttcgattatt tggaagaaaa taagcatcgt gtagcagggg tcttcttatc
     4441 tcacggacat gcagatgcta tcggggcgct tccttatctc ttggagaaag tgaaagtgcc
     4501 agtatttggt tcgcacttga cgatcgaatt ggctaagcta cttgtcaagg ggaataatgc
     4561 tactaagaaa tttaatgatt tccatgttat caatgctgaa acggaaattg atttcgggga
     4621 ttcagtggta tctttctttc agacgaccca ctctattcca gagagtttag gaattgtcgt
     4681 taagacggat ggaggaaata ttgtctacac aggtgacttt aagtttgacc aggcggcaga
     4741 taagttttat cgtacggatt ttgggcgatt ggctgaaatc ggtaacgaag gtgtgttggc
     4801 cctcttgtca gactcagcaa atgcagatag caatgttcaa gtagcgagca tgcatgaggc
     4861 tggggaggaa attctcaata cgattgctga ctgtgatggg cgtgttattg tggcagcagt
     4921 tgccagcaat attgtacgta ttcaacagat ttttgacgcg gcagaagcaa ctggtcgtcg
     4981 tgtcgtgttg acaggacatg atgtggaaaa cattgtccga acagcgattc aattgaaaaa
     5041 acttcgtttg gtcagcgaac gcttgttggt aaaaccaaag gatatgaaca agtatgaaga
     5101 ccatgaattg attattttag aaactggtcg tatgggcgag ccgttaaatg gattgcgtaa
     5161 aatgtctatc ggtagacatc gctatgttga aatcaaagaa ggtgatctag tttatattgt
     5221 taccactcca agtatttcaa aagaagcggt tgttgctcgt gtagaaaact tgatttacaa
     5281 ggctggtgga acggtcaaat ccattacaaa aaaactgcgt gtatctggtc acggcaatgc
     5341 gcgtgatttg cagctcatgc tcaacatcat gaagcctaaa tatcttttcc cagttcaagg
     5401 ggagtatcgt caattggatg ctcacgctaa ggctgcgctt gaaatcggta tgtatccaga
     5461 aaacattatc atcgttaagc gtggggatgt catggctttt gaagaggggg attttgtcca
     5521 tagtggagcg gttcctgctg gtgatgtcat gattgacgga aatgccatgg gcgatgttgg
     5581 aaatatcgtc cttcgtgacc gtaagatcct ctcagaagac ggtatcttta tcgtggctat
     5641 cactgtcaac cgccgtgaga aaaaaatcat ttctaaagcc aaggtcaata cccgtggttt
     5701 tgtctacgtg aaaaagagca aggacatctt gcgtgaggca tcagaattgg tgaatacaac
     5761 ggtggaaaat tactttacaa aggatagctt tgactggaca gagcttaaga gtgctgttcg
     5821 cgatgattta gcaaaattcc tctttgacca aactaaacgt cgcccagcta ttttaccggt
     5881 aattatggaa gtcaagtaag ctgatt
//
LOCUS       DASFQS010000115         5891 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.119, whole genome shotgun sequence.
ACCESSION   DASFQS010000115 DASFQS010000000
VERSION     DASFQS010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5891
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.119"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            71..235
                     /locus_tag="U1041_001977"
     CDS             71..235
                     /locus_tag="U1041_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769060.1"
                     /translation="MGDKPISFKDKDGNFVSAADVWNAEKLEELFNTLNPNRKLRLER
                     ERLARKSENE"
     gene            557..>5891
                     /locus_tag="U1041_001978"
     CDS             557..>5891
                     /locus_tag="U1041_001978"
                     /inference="COORDINATES: protein
                     motif:HMM:NF018196.1,HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM4769061.1"
                     /translation="MHHSRRKSFDWYGLKQHFSIRKYHFGAASVLLGMSIALGTGTQV
                     VQAAETVTTPESTSVASSTSATESTTSETSTETATSSSSERTVEIGYIVKYATEDDTL
                     ANASVETVSVTTTETIAKATVSVTAVVPEGYELASGQSATVSQEVTENGVNIVTVKVV
                     KKAEEKAATSETTTTASTETATAKSTEASTTTTTTESLTSAPTTPEASKAQTAASTRT
                     TPAQTATATQESSQSTATTNTDTVAPAATVSIDTTAEADVDALNAIAEQKAVTDTMMQ
                     NFSAALGTLSSRSDRSATLPDTPTITNMDNGNGIQGYWSEYATVLNKDEAAEAARLTP
                     APQVFPDGYIGDPTTGRMTFMILELSNSKDATLGATEYNAGSFNHRTGLNYYIAFSVN
                     RNSSDGTDTYAYLIDKTTNRIIDSKVLTTNGVGQEFDAIINATYIDPRSTGRFKFTMF
                     VTELEMKNHKTGETAITRSLNVAAGVGDGGDMSIVFNAMGSDRGEYTTFTGPAPTFAP
                     RQNTLYKVAGTAIRVEEELARYVQTADLAGDNFTTSGEAVFADYELIEKPTIVSGTLA
                     SSYVIGGAEIRYNPSTKAQKGIITTKTDGTSRLITYAINPDHPDFLANYEKYKAMTRA
                     EFVENAATILRLSERIDIIDAFAEQEKAINDDKSTTDDEKEAALSVLRKSTMAQLNTV
                     NDDFLITFVTKPIEPGGLNTENHAITGEAGYSYTSTKYKFQRRVRNSEGRQVVEITDT
                     IGYTLGPFSGEPKASLDPNSETSYMLADSDGNNINDADGRPINFSGARISLPNSNLVN
                     RNDQVYYYAEKGGVKVFYVDEDGNEIKDENLVTNHADTGSDYNLDTTEIKPEKITYKG
                     EVYYYKEIDLTTSNLVPPSANTDSEKRAIVKIDEVTGTIEQDTLKELTYVYEKAGNVN
                     VNYVDTKGNAISSKVIDVENGKPGDTYSTTDQKRDKIETATGEVYYLVPKGTYDVGTV
                     GDDGNLTAIGNNTATGIDAVSGDIESNVTKEITYVYQQAGNVIVHYVTEDDTELSGTT
                     DTGATTAATVNDTTNGKPGERYDTKDLKPKTITTADGKTYALVEASTKGEETGTVEAG
                     KTKEVTYVYKEVKGNVVVNYVDTEGNPIAGTTDAGNVTESSVEHTPETSTGTDYNTQN
                     LRPNTITTTDGKIYKLVPAAIPANETGKVVEGTTTVTYVYELLQGDVIVHYVDTEGNT
                     IADDVTDTQITDTGTDYNTKEDHKPEKIVNDETGDVYYILPKDEVKAGSAPETGKVVE
                     GTTEVTYIYQKAGSVNVNYVDTEGNVLKAPVADVTDGKPGSGYDTVLDNKLASISVDG
                     KLYRLAPANTYNVGTVSGDNNLTAVGNGKATGIDATTGTVEAGTTKEITYVYQEVKGD
                     VVVEYYDTEGNQIAKTVVDEDDKSVGTVYNTDEDNKPETITTEDGTVYYYKEVKDTSA
                     PTTGKVVEGTTTVQYVYEKAGSVNVNYVDTDGNPIQAPVADETNEKAGTEYATADNKP
                     STITTEDGKTYRLVEAGTYNVGTVSDDNNLTAVGNGKATGIDATTGTVEAGTTKEITY
                     IYEEVKGNVVVNYITTDGTVIKQPVEDTPTSSTGTPYDTKDNKPTTITTEDGKTYRIV
                     PVLTKGSETGKVVEGTTSITYVYEEVKGDVVVEYYDTEGNLISGLSDSGEAVDTKEVD
                     TPSTSTGTAYNTDEDHKPNTITTADGTVYYYKEVKDTSASTTGKVVEGTTTVQYVYEK
                     AGNVIVHYITEDGTVIKTPVNDETDAPAGKSYDTTDNKPTEIVTEDGSRYVL"
BASE COUNT         2060 a         1250 c         1259 g         1322 t
ORIGIN      
        1 tagctacctt actaatttca ttcagtcagt gatcgtttgt aaacagtcta taaaatagtt
       61 ggaggtttat atgggcgata aaccaatatc cttcaaggat aaggatggaa attttgtctc
      121 agcagccgat gtatggaatg ctgagaaatt agaagaactt tttaatacac ttaatccaaa
      181 tcggaaatta cgtttggaga gggagcgttt ggcaagaaaa tcggaaaatg aataattaga
      241 gatctgttag tttcaaaaga ctagcaggtt tttattaaga attttaaaaa taggactcgc
      301 gtcaggacca ttgacctgta ggtaaccaat ccacaatatc agaatgggca tgcaactaga
      361 aaaaagttac atgcgtcttt tcgcgtatgt tgcggaaaat ggaagatttt acttgaaaat
      421 ctgggggggg gtagggtata atgcttatag aatctaaaaa tagctagcta atagtaaaat
      481 gagagagatg taatttgaaa gcatttttag ttacctatct tatttttagc tatgcataga
      541 atacaggagg ataataatgc atcattctag aagaaaatct tttgactggt acggattgaa
      601 acagcacttc tcaattcgta aataccactt tggtgctgct agtgtcttac ttgggatgtc
      661 gattgcactt ggtactggga cacaggttgt tcaagcagca gagacagtta caaccccaga
      721 gtctacgtcc gtagcttcat ccacaagtgc tacagaatca acgacatcag aaacttcaac
      781 agaaacggcg acttcatcaa gttctgaacg tacagttgaa atcggctata ttgttaagta
      841 cgctactgaa gatgatacac ttgcgaacgc ttcagtagaa acagtttcag ttactaccac
      901 agaaacaatt gcaaaagcaa cggtatctgt cacagcagta gtaccagaag gatatgaatt
      961 agcatcaggt cagtcagcta cagtttctca ggaagtgacc gaaaacggtg taaatattgt
     1021 tactgttaaa gttgtgaaga aagctgaaga aaaagcagca acttctgaaa caactacaac
     1081 agcttcaaca gaaacagcaa ctgctaaatc aacagaagct agcacaacaa cgacaacaac
     1141 agaatcgctc acttctgcac cgacaacacc agaagctagc aaagcccaaa cagctgcgtc
     1201 aacgcgcaca acaccagcgc aaacggctac agcgacacaa gagtctagcc aaagcacagc
     1261 tacgactaac acagataccg tagcgccagc agcaacagtt agcatcgaca caacagcaga
     1321 agctgacgtg gatgcgctaa acgctatcgc tgagcaaaaa gcagtgacag atacgatgat
     1381 gcaaaacttc agcgcagcgc taggaaccct aagctcacgc tctgatagaa gcgcgacact
     1441 tcctgataca ccaactatca caaacatgga taacggtaac ggtatccaag gttactggtc
     1501 agagtatgca actgttctaa acaaagacga agccgcagaa gccgctcgtc tgacaccagc
     1561 accgcaggtc ttcccagatg gctatatcgg agatccgaca acaggtcgta tgacctttat
     1621 gattttggaa ctgtctaact cgaaggatgc tacgctaggt gctactgaat acaatgctgg
     1681 ttctttcaac caccgcacag gactaaacta ctacatcgct ttttctgtta accgtaactc
     1741 atcagacggt acagatacct acgcttacct gatcgataaa acaaccaacc ggattatcga
     1801 cagcaaggtg ctaacaacaa atggtgttgg tcaagaattt gatgctatta taaacgctac
     1861 ctatatagat ccaagaagta caggaagatt caaattcacc atgtttgtca ccgagcttga
     1921 aatgaaaaac cataagacag gtgaaacggc aatcacacgc tcgctaaatg tagctgctgg
     1981 tgttggtgat ggcggggata tgtcaatcgt ctttaacgcc atgggatcag atagagggga
     2041 gtataccaca ttcacaggac ccgcaccaac ctttgcccca cgtcaaaaca cgctgtataa
     2101 ggtagcaggg acagcgattc gtgttgaaga agaactggct cgctatgtcc agaccgctga
     2161 ccttgcaggt gataacttta ccacatctgg tgaagcggtc tttgctgact atgagttgat
     2221 agaaaaacca acgattgtct cagggacctt ggcgagttcc tatgttatcg gtggtgcaga
     2281 gatacgttat aaccctagca ctaaggcaca aaaagggatc atcaccacaa aaacagacgg
     2341 gacatctcgt ctcataactt atgcgattaa ccctgaccac ccagacttcc tagctaacta
     2401 tgaaaagtat aaggcgatga cacgagcaga gtttgtagaa aatgctgcta ccatcctacg
     2461 tttgtcagaa cgtattgata tcatcgatgc ctttgcagag caggaaaaag cgattaacga
     2521 tgataagtcg actacagatg atgaaaaaga agcagcgctc agcgttttac gtaagtcgac
     2581 aatggctcaa ctcaacaccg ttaacgatga tttcttgatt accttcgtta caaaaccgat
     2641 tgagccaggc ggtttaaaca ctgaaaacca cgccattaca ggtgaagcag gctatagcta
     2701 cacatcaacc aaatacaagt tccaaagacg ggtccgtaac tctgaaggac gtcaagttgt
     2761 tgagataacg gataccattg gttatacttt aggaccgttt agtggtgagc caaaagccag
     2821 ccttgatcca aattcagaaa caagttacat gttggctgat agtgatggca acaacatcaa
     2881 cgatgcagat ggacgaccga tcaacttctc aggggctagg atctcacttc ccaactctaa
     2941 cctagttaac cgaaacgacc aagtttacta ctacgctgaa aaaggtgggg ttaaggtatt
     3001 ctacgttgat gaggatggta acgagatcaa ggatgaaaac cttgtgacta accatgccga
     3061 tacagggtca gactataacc tagatacgac agagatcaaa ccagaaaaga ttacctataa
     3121 gggtgaggtt tactactaca aagagatcga ccttacaacc agcaacctgg tcccaccatc
     3181 agcaaacact gatagtgaaa aacgtgcgat cgtgaagatc gatgaggtca caggtaccat
     3241 cgaacaagat acccttaaag agttgaccta tgtctatgaa aaagctggta acgtaaacgt
     3301 taactatgta gatactaaag gtaatgccat cagtagcaaa gtcatcgatg ttgaaaacgg
     3361 taagccagga gatacctaca gcacaactga ccaaaaacgt gataagattg aaaccgctac
     3421 tggtgaggtg tactacctcg ttcctaaggg cacttatgac gttggtacag taggtgatga
     3481 cggtaacttg acagctatcg gtaacaacac tgcaacaggt atcgatgctg tctcaggcga
     3541 catcgaaagc aacgtgacca aagaaatcac ctacgtttac caacaagcag gtaacgttat
     3601 cgttcactac gttactgaag acgacacaga actttcagga accactgata caggtgccac
     3661 tacagcagct actgtaaatg atacgacaaa cggtaaacca ggtgagcgtt atgacaccaa
     3721 agacctcaag ccaaaaacca tcaccacagc agatggtaag acctatgcgc tagtcgaagc
     3781 atcaactaaa ggtgaggaaa caggtaccgt tgaagcaggt aagactaagg aagttactta
     3841 cgtctacaaa gaagtcaaag gtaacgttgt ggtgaattac gttgataccg aaggtaaccc
     3901 aatcgctggt acaacagacg caggaaacgt tacagaaagc agcgtagagc acacaccaga
     3961 gacatcaaca ggtaccgact acaataccca aaacctccgt ccaaacacaa tcaccacaac
     4021 agatggtaag atttacaaac tcgttccagc agctatccca gcaaacgaaa cgggtaaagt
     4081 tgtcgaaggc actacaaccg taacttatgt ctatgagtta cttcaaggtg atgttatcgt
     4141 acattacgtc gatacagaag gtaacacaat tgcagacgat gtaacagata cacaaatcac
     4201 tgatactggt acagactaca acaccaaaga agaccacaaa ccagagaaaa tcgttaatga
     4261 cgaaactggc gatgtttact acatcttgcc aaaagatgaa gtcaaagcag gctcggctcc
     4321 tgaaacaggt aaggttgtag aaggtacaac tgaagttaca tacatctacc aaaaagctgg
     4381 tagcgttaat gttaactatg tcgatacaga aggtaatgtt cttaaagctc cagttgcgga
     4441 tgtgacagat ggtaaaccag gttctggcta tgacactgtt cttgataaca aactggctag
     4501 catctcagta gatggcaaac tttaccgcct tgctccggca aatacttaca atgtaggtac
     4561 agtttcaggt gacaacaact tgacagcagt tggtaacggt aaagcaacag gtatcgatgc
     4621 tacgactggt acagttgaag ctggtacaac gaaagaaatc acttacgttt accaagaagt
     4681 gaaaggtgac gttgtagttg agtactacga tacagagggt aaccaaattg ccaaaacagt
     4741 cgtagacgaa gacgataagt ctgttggtac tgtctacaac acagatgaag acaacaaacc
     4801 agagacaatc acaactgaag atggaacagt ttactactac aaagaagtga aagatacttc
     4861 tgcaccaaca actggtaaag ttgtagaagg cacaacaact gttcagtatg tctacgaaaa
     4921 agcaggctct gtcaatgtta actatgtaga tacagatggt aacccaattc aagcaccagt
     4981 agctgacgaa acaaacgaga aagctggtac tgagtacgct acagctgata acaagccatc
     5041 aactatcaca acagaagatg gtaagactta tcgtctagtt gaagcaggta cttacaacgt
     5101 aggtacagtt tcagatgata acaacttgac agcagttggt aacggtaaag caacaggtat
     5161 cgatgctacg actggtacag ttgaagctgg tacaacgaaa gaaatcactt acatttacga
     5221 agaagtgaaa ggtaacgttg ttgttaacta catcacaact gacggtacag tgatcaagca
     5281 accagttgaa gatacaccaa catcatcaac aggtacacca tacgacacta aagacaacaa
     5341 accaacaaca attacaacag aagacggtaa gacataccgt atcgtgccag ttcttacaaa
     5401 aggttcagaa acaggtaagg ttgtagaagg aacaacatca atcacttacg tatacgaaga
     5461 agtgaaaggt gacgttgtag ttgagtacta cgatacagaa ggtaacttga tttcaggtct
     5521 atctgactca ggtgaagctg tagatactaa agaagttgat accccatcaa catcaacagg
     5581 tacagcatac aacactgatg aagaccacaa accaaacacc atcacaacag cagacggtac
     5641 agtttactac tacaaagaag tgaaagacac ttcagcttca acaacaggta aagttgtaga
     5701 aggtacaaca actgttcaat acgtttatga aaaagctgga aatgttatcg ttcactacat
     5761 cacagaagat ggtacagtaa ttaagacacc tgttaacgac gaaacagacg ctccagcagg
     5821 taagtcttat gacacaactg acaacaaacc aacagagatt gttacagaag atggttcacg
     5881 ttatgtcttg a
//
LOCUS       DASFQS010000116         5763 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.120, whole genome shotgun sequence.
ACCESSION   DASFQS010000116 DASFQS010000000
VERSION     DASFQS010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5763
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.120"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(343..663)
                     /locus_tag="U1041_001979"
     CDS             complement(343..663)
                     /locus_tag="U1041_001979"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769062.1"
                     /translation="MMNLLEYIGPILFITAIISYSLYRRFKDSKATINVPKCPKCKSE
                     KLQKYPPKKREYFPRDAIIGQAIGGRNGAMFALLYEADKTHYHCRFCGHNFAIKENRL
                     IRES"
     gene            869..2020
                     /locus_tag="U1041_001980"
     CDS             869..2020
                     /locus_tag="U1041_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001862055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM4769063.1"
                     /translation="MATFYVPAVNLIGRGCVNEIGSYVKNLGYKKALLVTDDFIRTSN
                     ILPKVTKPLDEVGIDYVVFSKVDPNPTCKNVFDGLAVLQENDCDFIISVGGGSPQDAA
                     SCISIMATNGGKPQDYEGLHKSEKLGLPVVAINTTAGTSAEITINYVITDEERKVKMV
                     MVDKNSLAVMSVNDPELMLSKPAALTAATGMDALTHAIEALVTPGAYGVTKKLSMGAI
                     ELIKEYLPRAVENGQDIEAREAMVHAIFLGGMSFNNAGLGYVHSMAHQLGAVYDLPHG
                     VCCAMILPIIERENAKRVPAAFRDVAKALGLDIAGKSDEECADYAIAQIEELSAKVGI
                     PKKLTELDIKEEDFDFEYLSKNALIDACAPGNPFMPTLDETISYYKELF"
     gene            2569..3849
                     /locus_tag="U1041_001981"
     CDS             2569..3849
                     /locus_tag="U1041_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HEM4769064.1"
                     /translation="MTREFSFETLQLHAGQEVDSASKSRAVPIYQTTSYVFEDAQEAE
                     DLFALRKSGNIYTRITNPTVSTFENRVAALEGGIGALATSSGMAAITYTILALAHAGD
                     HIVAATTLYGGTFNLFKETLPRYGITTSFVNIDDFEAVEAAIKDNTKLVFIETLGNPV
                     INIPDLEKLAEIAHTHHIPLVSDNTFATPYLINVFSHGVDIAVHSATKFIGGYGTTIG
                     GVIVDSGKFDWAASGKFPQFVEEDPSYHNISYTRDIGAAAFIVAVRVQLLRDTGAALS
                     PFNAFLLLQGLETLSLRVERHVSNAEKIVDFLLSHPQVESVNYPSLPDSPYKALADKY
                     LPKGVGSIFSFQVRGGGEEARKVIDSLEIFSNLANVADAKSLVVHPATTTHAQLAPED
                     LLAAGVTPNQIRLSVGLENINDLIEDLQLALDKL"
     gene            complement(3927..5459)
                     /locus_tag="U1041_001982"
     CDS             complement(3927..5459)
                     /locus_tag="U1041_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4769065.1"
                     /translation="MLLTTQHLSLDHQKDLRNLVHDLNLIVNPGDKIAIIGEEGNGKS
                     SLLLTLMDSTLVADYLLMSGSIHRYFHSPVYIPQGLPLEMAELTLNDYFFGDMDSDID
                     YSLLYLYAEQLQFDSVRFSSQQLIGNLSGGEKLKIQLIKSLATPSDIIFLDEPSNDLD
                     LDTLLWLENYIITSPNTILFVSHDEDFLSKTATKIIHLESVKKKTLAQTKVEELDYQD
                     YALGRQQAYQKQVQQARNDQKEFDKAMNKHLRQKSQVRHTLLNTHDATLGRLIAKKMK
                     NVLSREKRYERMKENLTQVPFHEDAISLFFSDISPLPARKQVLHLENFQLNIGGRQLV
                     QNIHFNLNGQEKIGIIGQNGIGKSSFLKIIYQKLRQRADINLGYMPQHYTEVLDESKT
                     PLDFLLENGNREQEQLILTHLASLQFTRQEVHHKICELSGGQKAKLLLLKMVLDQANF
                     LLLDEPSRNFSPTSQPYIRQLFADYPGGLVCVSHDRRFLKEVCQRIYRLTENGLEELG
                     QI"
BASE COUNT         1676 a         1012 c         1192 g         1883 t
ORIGIN      
        1 attttactga gattggtatt catatctttt aaagattgag acgatattat catactgtgg
       61 atgtgcaaat attctctcca aatacaaatt tgttcaaaaa cagcttagaa ttacatttcc
      121 agaaacgttg attctaagct gttttctatt ttatgatttt tgaccagggt ctgaataaca
      181 ataactttgg taatgtgttt tctagacatt gattcgtagc agttggatgg ggggagtttg
      241 tcagacctat agacaattcc aaattgaaat ctgctagaat attttatcag ttgtttttgc
      301 tttttgaagg taaaatgatg ttcaaggctt aaattgataa ttttaggatt ctctaattaa
      361 acgattttct tttattgcaa aattatgtcc acaaaatcga caatggtaat gagttttatc
      421 agcttcataa agaagggcaa acattgcgcc gtttcttcca ccaattgctt gaccaataat
      481 tgcatctcga ggaaaatatt cgcgtttttt gggagggtat ttttgaagtt tttctgactt
      541 acattttgga cattttggta cgttaatagt ggctttgcta tctttaaacc tccggtagag
      601 actgtagcta atgattgcag taatgaagag aatcgggccg atatactcga gtaaattcat
      661 cattttccct cctcgtaaac attattttac tgaattttaa accattcatc aagtaaacga
      721 attgttgcgg agtagcagta aggtagatgg tgaatcattg tcttgggcag gatgaaattt
      781 tttacgttaa aaatttcaca aaacctttac acaacttgct atttatagta taataatata
      841 aaaataaaat aaataaagga gcttgtctat ggcaacattt tacgtcccag cagtcaattt
      901 gattggtcgc ggttgtgtca acgaaattgg tagttatgtc aagaatttgg gctacaaaaa
      961 ggctctgctt gtaacagatg attttatccg aacaagtaat attttaccta aagttaccaa
     1021 gccacttgat gaagtaggta ttgactacgt agtctttagt aaggttgatc ctaatccgac
     1081 ttgtaaaaat gtatttgatg gtctagcagt tttgcaggaa aatgactgtg atttcatcat
     1141 ctcagttggt ggtggttctc ctcaggatgc ggcaagctgt atttctatca tggcgacaaa
     1201 cggtggtaaa ccacaagact atgaaggatt gcataagtca gaaaaacttg gtctgccagt
     1261 tgtagcaatc aatacaactg caggtacttc agccgaaatc accattaact acgttatcac
     1321 cgatgaagaa cgcaaggtta aaatggttat ggtggataaa aacagtctag ctgttatgtc
     1381 agtcaacgat cctgagctta tgttgtccaa gcctgcagct ttgacagcag caacaggtat
     1441 ggatgccttg actcatgcca tcgaagcctt ggtaactcct ggagcatacg gtgtaaccaa
     1501 aaaattatct atgggtgcca ttgagttaat taaagaatac ctaccacgag cagttgaaaa
     1561 cggacaagat atcgaagccc gtgaggctat ggtccatgct attttccttg gcggtatgag
     1621 ttttaacaat gctggtttag gttatgtgca ctcgatggct caccagttgg gagctgttta
     1681 cgatctacca cacggcgtct gctgtgcaat gattttgcca atcatagaac gtgaaaatgc
     1741 caaacgtgta ccagcagctt tccgcgatgt tgcaaaagct ttaggtcttg atatcgcagg
     1801 caagtcagac gaagaatgtg ctgactatgc cattgcacaa atcgaagaat tgtcagccaa
     1861 agtcggtatt ccgaagaaat taacagagtt ggacatcaaa gaagaagact ttgactttga
     1921 atacctttct aagaatgcct tgattgatgc ttgtgcacca ggaaatccat tcatgccaac
     1981 attagatgag acaatctcat attacaaaga attgttctag gataatatct gttttctgtt
     2041 aaggaagttg ggcaagtgat ccattatggt ttgcccggct tcctcttttt cgtggaagta
     2101 tatctaacga acatcagata aaatggaata gaacttgttc taaaatttag tcattaagtc
     2161 tttttagacc taaatgcatt aattttgtaa aatctttaac tattggccta ctttgatgaa
     2221 tcgatttcgt tgactacgaa agatgaccgt aaaacgacaa agaaatggga attgtcagct
     2281 tcgtaaagaa gggaaaagct tgcaccattt ttcctccagt agcttgtcca ttaattgcat
     2341 gtcgagaaga aaagtcacga tttttgaagt atatttctcc gcttttactg acttacattt
     2401 tagtcattta agtgcttgtt tagtatccat gtaatatgga aaaatttttc ttataggata
     2461 actgattagt ggctatagtt gttaactata catatctcta atgtttaagt attagtcaag
     2521 acggtaaaaa tgaggtagaa tacagaaaaa gaccaaagga gtacctttat gactagagaa
     2581 ttttcatttg aaacccttca actccatgct ggacaagaag ttgattctgc ttcaaaatca
     2641 cgtgctgtac ccatctatca aaccacttcc tatgtttttg aagatgctca agaagcagaa
     2701 gatttatttg cattgcgtaa atcagggaat atctatactc gtatcactaa tccgacggtc
     2761 tctacttttg aaaatcgtgt agcagcttta gaaggtggga ttggtgcctt ggccacttct
     2821 tcaggaatgg cagccatcac atacactatt ctagcattag cgcatgctgg tgatcacatt
     2881 gtggcggcaa cgacactcta tggtgggact tttaacctat tcaaagaaac ccttcctcgc
     2941 tatggtatta caacaagctt tgtcaatatt gatgattttg aagcggtaga agctgcgatt
     3001 aaagataata caaaactggt atttattgaa accttgggaa atcctgttat caatattcct
     3061 gatcttgaaa aattggcaga aattgcacac acccaccaca tcccgcttgt ttcagataat
     3121 accttcgcaa ctccatattt gattaatgta ttttctcatg gtgttgatat tgccgtccat
     3181 tcagcaacca agtttatcgg tgggtatggt acgaccattg gcggtgtgat tgtcgatagc
     3241 ggcaagtttg attgggcggc atctggtaag tttccgcaat ttgttgaaga agatccaagc
     3301 tatcataaca ttagttatac tcgtgatatt ggtgctgcag catttattgt agcagttcgt
     3361 gtacaattac ttcgtgatac aggtgctgcg ctttctccat tcaacgcctt tttgcttttg
     3421 caagggttag aaaccttgtc tctccgtgta gagcgtcatg tatctaatgc tgaaaagatt
     3481 gttgactttt tacttagtca tcctcaggta gagtcggtca attatccatc acttccagat
     3541 agtccttata aggctttggc ggataaatac ctgcctaaag gtgttggatc tattttctct
     3601 ttccaagtaa gaggcggagg ggaagaggcg cgtaaggtta ttgatagttt ggaaatcttt
     3661 tctaatctag caaacgttgc cgatgctaaa tcactagtag ttcatccagc tacaactacg
     3721 catgctcagt tagctccaga agatttactt gctgctgggg tcacaccaaa tcaaatccgc
     3781 ctatctgttg gtcttgaaaa tatcaatgat ttgattgagg atttgcaact tgctcttgat
     3841 aaattatagg ttgtgaattg aatagcatgg cttcattctt tatgaataaa taaaaggaaa
     3901 tttggcgtgt gtgccatttt ccttttttat atctgtccaa gttcttccag tccattttca
     3961 gttagtcgat agattctttg acaaacttct ttcaaaaatc gtctgtcgtg tgatacgcat
     4021 accaaaccac ctggataatc ggcaaatagt tgacgaatat atggctggga agtgggagag
     4081 aaatttcgac tgggttcatc taataagaga aaattggctt gatcaagaac catttttaac
     4141 aagagtaact tggctttttg tccccccgaa agttcacaga tcttgtgatg aacttcttgt
     4201 cgtgtaaact gcagactggc tagatgtgtt aagataagtt gttcctgctc acgattgccg
     4261 ttttctaata aaaaatcaag tggagtttta gactcatcaa ggacttctgt atagtgctgg
     4321 ggcatgtagc ccaagtttat atctgctcgt tgcctgagtt tctgatagat tatttttaga
     4381 aagctggatt taccaattcc attttgtcca atgatgccaa ttttctcttg tccatttaag
     4441 ttgaaatgga tattttgaac caattgtctc cctccaatat tcaattggaa gttttctaag
     4501 tgaagcactt gttttctagc tggtagtggt gaaatatctg agaagaagag ggaaatggca
     4561 tcttcatgaa aaggaacttg tgtaagattt tccttcattc tttcatagcg tttttcacgc
     4621 gataagacat tcttcatttt cttggctatg agccgtccta gtgtggcatc atgggtgttg
     4681 agcaaggtat gacgaacctg tgatttttga cgtaggtgct tgttcatggc tttgtcaaat
     4741 tctttttggt cgttccgagc ttgttggact tgtttctgat aggcttgttg gcgtcccaat
     4801 gcgtaatcct ggtagtccag ttcttcaacc ttagtttgag caagtgtttt cttcttaaca
     4861 gattctaggt gaatgatttt tgtagctgtt ttactgagga agtcttcatc gtgagaaaca
     4921 aatagaatgg tgttagggct cgtgatgata tagttttcaa gccaaagtaa ggtatctaaa
     4981 tccaagtcat tggacggctc atccagaaaa ataatatcag atggagttgc tagagatttg
     5041 attaactgaa tttttaattt ttctccgcca gataggtttc caatcaattg ctggctggaa
     5101 aaccgtacgc tgtcaaactg gagttgctca gcatagaggt agagtaggct gtaatcaatg
     5161 tcactgtcca tatctccgaa gaagtagtcg ttcaaggtta gctctgccat ttccaatgga
     5221 agaccttggg gaatgtagac tggcgagtga aaatatcggt gaatgctgcc tgacatgagt
     5281 aggtagtcgg cgacaagagt tgaatccatc aaggtgagta ataggctgga tttgccattt
     5341 ccttcttccc cgatgatagc tattttatcg ccagggttga caatgaggtt taggtcatga
     5401 accagatttc tcaaatcttt ttgatggtcg agggataggt gttgagtggt taatagcata
     5461 aggtctcctt tacaagaaaa aacacactac ctatttagta gtgtgtcgaa atctgctcaa
     5521 aaagacccta ttcatggaac agaggaaaca gaaaaatgga cgcaagaaaa ctactaaata
     5581 agtatagaac ttaaattgag ttttacttgt tattgtccat ttctccttac ctcgcttgct
     5641 ttatttgctt tagtatagca ttttgataaa atcttgtcaa ttagcatgct ataacattta
     5701 ttgatatgct aaattcccaa agtaagttct agtctgtctt aaaaactgga aattagactg
     5761 aga
//
LOCUS       DASFQS010000117         5709 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.121, whole genome shotgun sequence.
ACCESSION   DASFQS010000117 DASFQS010000000
VERSION     DASFQS010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5709
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.121"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..326
                     /locus_tag="U1041_001983"
     CDS             <1..326
                     /locus_tag="U1041_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4769066.1"
                     /translation="TSEKQMPVNEKDNAVTPEKQMANKEKENIETSKKQIPVNENNQN
                     GTVEENSNTKQTTEKTDKQETSTFKTETAKQILPVTGEKGSLWLLTSGIIGLAIALFT
                     RKRKL"
     gene            complement(746..1750)
                     /gene="ccpA"
                     /locus_tag="U1041_001984"
     CDS             complement(746..1750)
                     /gene="ccpA"
                     /locus_tag="U1041_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HEM4769067.1"
                     /translation="MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLE
                     VIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFATLAKGIDDIADMYKYNIVLAN
                     SDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
                     SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEG
                     LVFESKYKYEEGYALAERILNAGATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITS
                     DDSLVTKFTRPNLTSINQPLYDVGAIAMRMLTKIMHKEELENREVVLNHGIKVRKSTK
                     "
     gene            1959..3044
                     /locus_tag="U1041_001985"
     CDS             1959..3044
                     /locus_tag="U1041_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM4769068.1"
                     /translation="MSKLHHVKSYLEANKMDLAIFSDPVSIYYLTGYHSDPHERHMML
                     FVMPDHDSLLFLPALDVERAVATVDFPVAGYMDSENPWQIIKSKLPQKSFSAIGAEFD
                     NLNLTRYHGLQSIFSQPFSDITPLINTMKLIKSRDEIEKMLVAGEFADKAMQVGFNNI
                     SLDVTETDIIAQIEFEMKKQGISKMSFETMVLTGDNAANPHGIPSTNKIENNALLLFD
                     LGVETLGYTSDMTRTVAVGKPDQFKKDIYNLTLEAHMAAVNMIKPGVTAGEIDYAARS
                     VIEKAGYGEYFNHRLGHGLGMNVHEFPSIMEGNDLVIEEGMCFSVEPGIYIPGKVGVR
                     IEDCGYVTKNGFEVFTKTPKELLYFEG"
     gene            complement(3084..4226)
                     /gene="tgt"
                     /locus_tag="U1041_001986"
     CDS             complement(3084..4226)
                     /gene="tgt"
                     /locus_tag="U1041_001986"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEM4769069.1"
                     /translation="MTDVPIKYRLIKKEKHTGARLGEIITPHGTFPTPMFMPVGTQAT
                     VKTMSPEELKAMGSGIILSNTYHLWLRPGDELVARAGGLHKFMNWDQPILTDSGGFQV
                     YSLADSRNISEEGVTFKNHLNGSKMFLSPEKAISIQNNLGSDIMMSFDECPQFYQPYD
                     YVKKSIERTSRWAERGLKAHRRPHDQGLFGIVQGAGFEDLRRQSAHDLVSMDFPGYSI
                     GGLAVGETHDEMNAVLDFTTPLLPENKPRYLMGVGAPDSLIDGVIRGVDMFDCVLPTR
                     IARNGTCMTSRGRLVVKNAQFAEDFTPLDPECDCYTCKNYTRAYLRHLLKADETFGIR
                     LTSYHNLYFLINLMKNVRQAIMDDNLLEFRQDFMEKYGYGKNGRNF"
     gene            4546..5388
                     /locus_tag="U1041_001987"
     CDS             4546..5388
                     /locus_tag="U1041_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HEM4769070.1"
                     /translation="MFTISNIRERARQTLNETPGIYQLAVIPVTISVIVQLISFSRNS
                     LAGVSAEELASPSYFISTSLFPLFYGLLLGLLHLSIICTIFHLIKGVKTSTSFNDVLM
                     IFNHKDFWKIFRTYILTSFLLFLWGLLFYLGIGLLIGAGTMITIIAASSQSLDPDALP
                     MEILAILGLMAMGGILLMVLGIALYIPQFYAYSQVEYILFEQLEREEYTGAFSIIKSS
                     RKLMKGYKFKRFTLDLSFIGWFLLVIITFGLAGLYVWPYHYAAQMHFHEEILDEQAKK
                     MSYV"
BASE COUNT         1683 a         1195 c         1066 g         1765 t
ORIGIN      
        1 aaacctctga aaaacaaatg cctgttaatg agaaggacaa tgccgtaaca cctgaaaagc
       61 aaatggctaa taaagagaag gaaaatatcg aaacctctaa aaaacagata cctgttaatg
      121 agaataacca aaatggtaca gtcgaagaaa attcaaacac taaacaaaca actgaaaaaa
      181 cagacaagca ggagacttca acatttaaaa ccgaaactgc taagcaaatc ttaccagtaa
      241 ctggtgagaa aggaagttta tggttattga caagtggtat tatcgggctt gcaattgcgt
      301 tatttacacg taaacgtaaa ttataataat cacctaactg atacagttct aaaggatgag
      361 aaaaagccca gtactacttc tctagattcg catcaacatc tccacaactt ccagagtgtg
      421 acagacttaa aatcaaccac aaagccctcg ctaagcttat acatctagcg agggctttat
      481 atttattttt tataatcttt tagttttcgg ttagtatagc catttcgttt gcttttagta
      541 ctcgcttcaa aggttcaggg aacctttgaa ggctggagat aagtcgaagc aagtttgcct
      601 caatagctac aggttgctag aacagcctaa aggctgttct aagttggaaa tgtctcctcg
      661 ctcgtcgaag taaccaaatg attataatgt ttgatagagt gagggcggag taataagata
      721 tcttatccgg ctactcccat atttatcact tagttgattt ccgtactttg attccgtggt
      781 taagaaccac ctcacggttt tccaactctt ccttgtgcat gattttggta agcatgcgca
      841 tagcaattgc accaacatcg tatagtggct gattgataga ggtcaggttt ggacgggtaa
      901 acttggtcac taaggaatca tcacttgtaa tgatttcaaa gtcttctgga accttgacgc
      961 ccatatcact gacaccattc aatagaccag cagcaatctc atcttctgca acataagctg
     1021 cagttgctcc ggcattcaaa atacgttctg ctagagcgta gccctcctcg tatttatact
     1081 tggattcaaa aaccaatcct tcgttaaact cgattccgtt gtccttcaag ccttgtttgt
     1141 agcctgcaaa acgaacttta ccgttgatgt catctacaag cggtcctgat acaaaggcaa
     1201 ttttcttgtt gttcttagct aatagattga ctgcatcaac actagcggca gcatagtcaa
     1261 tattgacgct aggtaattgg tgctccaagt ccacggtacc agctaaaaca atcggtgtac
     1321 gtgagcgtga aaactccgca cgaatcttgt ctgtcaaatg atagcccatg aaaatgattc
     1381 cgtccacctg ttttgagaat agggtattta ctacattgat ttctttctca tcattttcat
     1441 cactgtttgc taggacgata ttgtatttat acatatcggc aatatcatcg atacctttgg
     1501 ccaaggttgc aaaataagca ttagcaatat ttggaatcac aacccccaca gtggtagtct
     1561 tcttgctggc caatccacgt gcaacagcat ttggacgata atccaaacga tcgatgactt
     1621 ctaatacttt tttacgagta ttttccttta cgtttttatt cccatttacc acgcgcgata
     1681 ctgtcgccat ggatacacct gcttcacggg cgacatcgta aatcgtaacc gtatcatcag
     1741 tgtttaacat aacttttgta ctccctttca atattctatt tctatgaaaa ttacgctttc
     1801 actcgattat agtgtatcac tttttgaaac cactttcaag agaaaaaacc tatttttttg
     1861 ataatacttg caattttttt cattttttgg aacaatagtc tatataataa acgaaatttt
     1921 cacttttttt accactacat gctagaaagg gctccactat gtcaaaatta catcatgtta
     1981 aatcctactt agaagccaac aaaatggact tggcaatctt ctctgatcca gttagcatct
     2041 attatctgac tggctatcat agtgatcctc atgagcgcca catgatgctc tttgttatgc
     2101 ctgaccacga ctcactactc tttctccctg ccttggatgt agagcgtgcg gttgcgactg
     2161 ttgactttcc tgtagccggc tatatggact cagaaaatcc atggcagatt atcaagagca
     2221 aattgccaca aaaatctttc tcagcaatcg gtgcagaatt tgataatttg aatttaaccc
     2281 gctaccatgg tcttcagtct atctttagcc aaccattttc agacattacg cctctgatta
     2341 atactatgaa attgatcaag tctcgtgatg aaattgaaaa aatgctggtt gctggagagt
     2401 ttgcagataa ggctatgcag gttggtttca ataacatctc actcgatgta accgaaactg
     2461 atattattgc tcagattgaa tttgaaatga agaaacaagg catctcaaaa atgagctttg
     2521 agaccatggt cttaacaggc gacaatgccg caaatccaca cggtattccc tcaacaaaca
     2581 aaatcgagaa taacgctctg ctattgttcg acctaggcgt ggaaactttg ggttatacgt
     2641 ctgatatgac acggactgtc gctgtcggta aacctgatca gtttaaaaaa gatatttaca
     2701 acttgactct ggaggctcac atggccgcgg tcaatatgat taagcctggt gtgactgctg
     2761 gtgagattga ctatgccgct cgctctgtga ttgaaaaagc aggttatggt gagtatttca
     2821 accaccgact cggtcacggt ttgggaatga atgtccatga attcccatca attatggaag
     2881 gcaatgattt ggtcatcgaa gaaggtatgt gtttctctgt cgagcctggt atttacatcc
     2941 ctggaaaagt tggtgttcgt atcgaggatt gtggttacgt tacaaaaaat ggctttgaag
     3001 tctttacaaa aacaccaaaa gaattactgt attttgaagg gtaaaaaaca agcctcctac
     3061 gattttgtag gaggttgttt attctagaaa tttctgccgt ttttgccgta gccatatttt
     3121 tccataaagt cttgacggaa ctccaataaa ttatcatcca taatggcttg acggacattt
     3181 ttcatcaaat taatcaagaa gtagaggttg tgataacttg tcaaacgaat accaaacgtc
     3241 tcgtcggcct taagtaaatg gcggagatac gcacgtgtat agtttttaca tgtgtagcaa
     3301 tcgcactctg gatctaacgg tgtaaagtcc tcagcgaact gagcattttt caccacaaga
     3361 cgtccacgac tggtcataca ggttccatta cgcgcaatac gtgttggtaa tacacagtca
     3421 aacatatcaa ccccacgaat cacgccatca atcaagctat ctggtgctcc aacacccatg
     3481 agatagcgtg gtttattctc cggtaaaaga ggggtcgtga agtccagtac agcattcatt
     3541 tcatcgtgtg tttcaccaac agccaatcct ccaatagagt atcctggaaa atccatgcta
     3601 accaaatcat gggctgattg gcgacgaaga tcttcaaaac cagcaccctg tacaatacca
     3661 aataaacctt ggtcatgcgg acggcggtga gccttgagac cacgttctgc ccaacgactt
     3721 gttctttcga tggatttttt tacataatca taaggctggt agaactgcgg acactcatca
     3781 aagctcatca tgatgtctga gcctagattg ttttgaatgg aaatggcctt ttcaggtgac
     3841 aagaacattt tactaccatt gagatggttt ttaaatgtaa caccttcttc tgagatattg
     3901 cgactatccg ccaaagaata aacctgaaag ccacctgagt cagtcaaaat cggttgatcc
     3961 caattcataa acttgtgcaa accacctgca cgcgccacca attcgtcacc cggacgaagc
     4021 cacaaatgat aggtattcga taggataatt cctgaaccca tcgccttcaa ttcttcaggc
     4081 gacatggttt ttaccgttgc ctgagttcca actggcataa acattggagt tggaaaggtc
     4141 ccgtgtgggg taatgatttc gcccaaacgt gcacctgtgt gcttttcttt cttaatcaag
     4201 cgatacttga ttggaacatc tgtcatgttt tatttacctc ccgctaggaa aaacagtcct
     4261 aggatattag ttctggattt acagttcagc tctttcatat catacataaa agtactttac
     4321 ctggaaatac agtttctcaa tcttgcatgg tctaatccat cagaatgtct ttaatgttct
     4381 cgcttatttc agcgatattt accttatctt ctacttattt aatagtaaat agacaggcgc
     4441 atcacaacaa actgacaaat taccacagca ccttccagtc tatcaaaaaa agcctagctt
     4501 gtcatctaga attatgttac aatattcagc aaggaggtta tgtagatgtt tacaatttct
     4561 aatatacgtg agcgggctcg ccaaacacta aacgagacac ctggtatcta tcaattggct
     4621 gtcatccccg tcactatttc tgttatcgtt cagttaattt ctttctctcg caatagcctt
     4681 gctggagtgt cggctgagga acttgctagt cctagctact ttatttctac ctccttgttt
     4741 ccactatttt acggattgct attaggacta ctgcacttat ccattatatg cactatattt
     4801 catcttatca aaggggtaaa aacttccaca tcatttaacg atgtgctgat gattttcaat
     4861 cataaagatt tctggaaaat ctttcgaacc tacattttaa caagtttctt gctcttcctt
     4921 tggggactac tgttttacct tggtattggt ttacttatcg gtgctggaac gatgattaca
     4981 atcatagctg catccagtca atccttagac cctgatgcac ttcctatgga aatccttgcc
     5041 atactagggc taatggccat gggaggtatc ctacttatgg ttttaggaat tgctctttat
     5101 attccacaat tctatgctta ttcacaggta gaatatatct tgtttgaaca attggaacgc
     5161 gaagaatata caggtgcttt ttcaatcatt aaatctagtc gaaagttgat gaaaggttac
     5221 aagtttaaac gctttacact tgatttatcc ttcattggct ggttccttct tgtcattatt
     5281 acatttggcc tggctggttt atatgtatgg ccgtatcact atgctgcaca aatgcacttc
     5341 catgaagaaa ttttagatga gcaggctaag aaaatgagtt acgtataaaa ataagagcga
     5401 tatctgctct tatttttata tacactttta tgtctatatt taagaaaaaa atatagtaat
     5461 aattggtaaa aacatttgga ttgtgttata ctatgactga ggagcaacaa aggactattt
     5521 tagcctgctt ggtattggag cagatttctt cctttctatt ttttacgcca tgtgtagtaa
     5581 tttgttccaa ttctaagtgc tcctccttag agtcatccgg cagttcaatg gttcattgaa
     5641 ctgctttttc gatgaaaaag ggagtgggaa agaactcgac cagtctaaaa agagttcgtc
     5701 aacaagtcc
//
LOCUS       DASFQS010000118         5688 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.122, whole genome shotgun sequence.
ACCESSION   DASFQS010000118 DASFQS010000000
VERSION     DASFQS010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5688
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.122"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(16..327)
                     /locus_tag="U1041_001988"
     CDS             complement(16..327)
                     /locus_tag="U1041_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM4769071.1"
                     /translation="MQEKHEQTITLTAAELLGLIQTESVQLLDVRDPEEYSDGHIGGA
                     INCPMDRIAAFDGPVDQHYLLICKSGKRSKLAREIMSSKGFKANDIAGGMEAWDGLIV
                     K"
     gene            456..1013
                     /locus_tag="U1041_001989"
     CDS             456..1013
                     /locus_tag="U1041_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HEM4769072.1"
                     /translation="MPTEKEKMIAGQFYMAADAELREMRTFARQQMKKFNEELDGQVR
                     SERLKNWFGSTGERIYMEPNFYCDYGSNIHVGEDFYANFNCTMLDVCPITIGNNAMLG
                     PNVQLLTPLHPLDPDERNSGLEYGAPITIGDNFWAGGGVTILPGVTLGDNVVVGAGAV
                     VTKSFGDNVVLAGNPARVIKEIPKK"
     gene            1072..1914
                     /gene="dprA"
                     /locus_tag="U1041_001990"
     CDS             1072..1914
                     /gene="dprA"
                     /locus_tag="U1041_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEM4769073.1"
                     /translation="MNNFELFKWKKAGLTNLNINKVLTYQDLHGKKLTLRNIAVVSEC
                     KNPVLFMENYKNLDIKACREEFNKFPSFSILDDVYPLALKQIYNPPVLLFYQGDLELL
                     EKSKLAVVGTRNASKTGIQSVQKIIKELNNRFVIVSGLARGIDTAAHIASLKNGGQTI
                     AVIGTGLDKIYPKENRELQTYIGKHHLVLTEYEPGADPLKYHFPERNRIIAGLVEGLV
                     VCEAKMRSGSLITCERALEEGREVYAIPGSILDGKSDGCHHLIQEGAKCVTSGLDIIS
                     EYQF"
     gene            2007..4100
                     /gene="topA"
                     /locus_tag="U1041_001991"
     CDS             2007..4100
                     /gene="topA"
                     /locus_tag="U1041_001991"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEM4769074.1"
                     /translation="MATKSVSKKKTTTKKNLVIVESPAKAKTIEKYLGKNYRVVASVG
                     HIRDLKKSSMSIDFDNNYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAI
                     SWHLAHILGLDEKDKNRVVFNEITKDAVKNAFKEPRAINHDLVDAQQARRVLDRIVGY
                     SISPILWKKVKKGLSAGRVQSVALKLIIDRENEISNFKPEEYWTIDATFKKGSKKFQA
                     SFYGLDGKKVKVENNEQVKEILARLDGDDFLVEQVERKERKRNAPLPYTTSTMQMDAA
                     NKINFRTRKTMMVAQQLYEGVSLGTGGTQGLITYMRTDSTRISPVAQAQAADFITERF
                     GATYSKHGNKVKNASGAQDAHEAIRPSNVNLTPESIAKYLDKDQLRLYTLIWNRFVAS
                     QMAAAVFDTMSVRLGQNGIVFAANGSQVKFDGYMAVYNDADKNKMLPDMEQGDTVVRA
                     STNPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTIETIQKRYYVKLAAKRFEPT
                     ELGEIVNKLIVEFFPDIVNVKFTADMEQKLDDVEIGKEQWQKVIDGFYQPFKVELSKA
                     EEQMEKIQIKDEPAGFDCDVCGHEMVIKLGRFGKFYACSNFPDCRNTKQITKEIGVTC
                     PVCQKGQVIERKSKRNRLFYGCDRYPECEFTSWDKPVGRSCPKCDHYLVEKKVRGGGK
                     QVVCPNGDYEEDKIK"
     gene            complement(4209..5484)
                     /locus_tag="U1041_001992"
                     /pseudo
     CDS             complement(4209..5484)
                     /locus_tag="U1041_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000436265.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1738 a         1046 c         1233 g         1671 t
ORIGIN      
        1 ctttccgaaa tacccttatt tcacaatcaa tccgtcccaa gcctccatgc cacctgcaat
       61 atcatttgcc ttaaatccct tagatgacat gatttctctg gccagcttgc tacgttttcc
      121 gctcttacag atgaggagat agtgttggtc gactggtcca tcaaatgcgg caatccgatc
      181 catgggacaa ttaatagcac caccaatatg accatctgaa tattcttccg ggtcacgaac
      241 atctagcaat tgcaccgatt cagtttgtat caacccaagc aattctgcag cagtcaaagt
      301 tatagtttgt tcatgttttt cttgcatgat tccctctttc gttggtttaa attaataaga
      361 acaataccaa atcttagctg gacttgtcaa gaaagattga cttttagaat aagaaatcct
      421 ataatatata ttaagaagaa aataggagca gaagtatgcc aacagaaaaa gaaaagatga
      481 tagctgggca attttatatg gcagcagatg ctgaattgag agagatgcga acctttgccc
      541 gccaacagat gaaaaaattt aacgaagaac tagatggaca agtccgctct gagcgattga
      601 aaaactggtt tggaagtaca ggcgaacgca tttatatgga gccaaatttc tattgtgact
      661 acggtagcaa tattcatgtt ggtgaggatt tttacgcaaa tttcaactgt accatgttgg
      721 atgtttgtcc cattaccatt gggaacaatg ccatgcttgg tcccaatgta cagttgctaa
      781 ctcctcttca tccactggat cctgacgaac gcaattctgg cttggaatac ggggctccaa
      841 ttaccatcgg tgataatttc tgggctggtg gtggggtgac aatcttacct ggcgtgacct
      901 tgggcgataa tgtcgttgtt ggagctggag cagttgttac caaatcattc ggtgataatg
      961 tcgttttggc tggcaatcct gcgcgtgtta tcaaagaaat acctaaaaaa taattcttct
     1021 tcgggagaat tttttctttg ccttgcgaat agactagatg aggtgaagaa aatgaataat
     1081 tttgaattgt ttaaatggaa aaaagcaggt ctgaccaatc taaatattaa taaagttttg
     1141 acctatcaag atttacatgg taaaaaattg accttgcgaa atatcgctgt cgtatccgaa
     1201 tgtaaaaatc cagtgttatt tatggaaaac tataagaatt tggatatcaa agcctgtcga
     1261 gaagaattta acaagtttcc ttctttttcg attttggatg atgtctatcc actagcattg
     1321 aagcaaattt acaatccacc tgtacttttg ttttatcaag gggatttaga attgctggaa
     1381 aaatccaaac tggcagttgt tggtactcga aatgccagca aaactggcat tcagtctgtt
     1441 cagaagatta tcaaagaact caacaatcgc tttgtcattg ttagtggttt ggcaagagga
     1501 attgatacag ctgctcacat tgctagcctg aaaaatggtg gacaaaccat tgccgttatt
     1561 ggaacaggtt tggataagat ttatcccaaa gaaaacagag aattacagac ctacatcgga
     1621 aaacaccatt tagttttgac tgaatacgaa ccaggtgcag accctctcaa ataccatttt
     1681 ccagaacgca atcgcattat agctggtttg gtggaaggat tggtagtctg cgaggcaaaa
     1741 atgcggtctg gcagcttgat tacttgtgaa cgtgctttag aggaggggcg agaggtttat
     1801 gccatcccag gttcaatttt ggatggaaaa tcagatggtt gtcatcatct gattcaagag
     1861 ggtgcaaagt gcgtaacatc aggcttggac atcatttctg agtatcaatt ttaaaacaag
     1921 tcttcctata ggaaaataaa tatcttgaca ctgactgaaa aatagtatat tctttgtgag
     1981 gttaaaaata tttgtaaggt ataagaatgg ctacaaaatc agttagtaag aaaaaaacga
     2041 caaccaagaa gaatcttgtc atagtggaat cacctgccaa ggccaaaact attgagaagt
     2101 atcttggtaa aaactaccga gttgttgctt cagtaggtca tatccgtgat ttgaaaaaat
     2161 ccagtatgtc tattgacttc gataacaact atgcacctga gtatatcaat atccgcggaa
     2221 aaggtccgct tatcaattcc ttgaagaaag aggcaaaaaa tgccaaacaa gtctttctgg
     2281 caagtgaccc ggaccgtgaa ggagaagcaa tttcttggca tctggctcat atcttgggac
     2341 tagacgaaaa ggataaaaac cgtgttgtct ttaatgaaat tacaaaagat gcagtaaaaa
     2401 atgccttcaa ggaacctcgt gctattaatc acgatttggt cgatgcccaa caggctcgcc
     2461 gtgttctaga ccgtattgta gggtactcca tatcacctat tttatggaag aaagtcaaaa
     2521 aaggtctgtc agcaggacgt gttcaatcgg ttgcgctcaa attaataatc gaccgtgaaa
     2581 atgaaatcag caatttcaaa ccagaagaat attggacaat tgatgcaacc tttaaaaagg
     2641 ggagcaagaa attccaagcc agcttttatg gcttagatgg aaaaaaagtc aaggttgaaa
     2701 acaatgagca ggttaaagaa attctcgccc gacttgatgg ggatgatttc ttagtagaac
     2761 aggttgagcg taaggaacgc aaacgaaatg cacctctgcc ttacacaact tctactatgc
     2821 agatggatgc agctaataaa atcaatttcc gtactcgtaa aaccatgatg gttgctcaac
     2881 aactttatga gggtgtcagt cttggcacag gtggtaccca aggtttgatt acctatatgc
     2941 gtacggattc aacacgtatt agccctgttg cacaagcaca agctgctgac tttatcacgg
     3001 agcgttttgg tgctacctat tcaaagcatg gtaataaagt aaaaaatgcc agtggtgcac
     3061 aagatgccca cgaagctatt cgtccctcaa atgttaactt aacacctgaa tcaattgcaa
     3121 aatatctgga caaggaccag ttgcgactat atacactgat ttggaatcgt tttgtcgcaa
     3181 gtcagatggc tgcagcagtt tttgatacca tgagtgttcg tttgggtcaa aatggtattg
     3241 tctttgctgc taatggtagc caagtaaaat tcgatggtta tatggctgtc tataacgacg
     3301 ctgataaaaa taaaatgttg ccagatatgg aacaaggtga cacggtggtg cgcgcgtcaa
     3361 caaatccaga acaacacttt actcagccac cagctcgcta ctctgaagca accttaatta
     3421 aaacattaga agagaatggt gtaggtcgcc cgtcaaccta tgcaccaacg attgaaacca
     3481 ttcaaaaacg ttactatgtt aagcttgctg cgaaacgatt tgaaccgact gaactcggag
     3541 aaatcgttaa taagctgatt gttgaattct tcccagatat tgtcaatgtc aaatttacag
     3601 ccgatatgga acaaaaattg gatgatgtag aaatcggaaa agagcagtgg cagaaggtca
     3661 ttgacggttt ctatcagcca ttcaaggtag aattatctaa ggcagaagaa cagatggaaa
     3721 aaatccaaat taaggatgaa ccagctggct ttgactgtga tgtttgtgga catgaaatgg
     3781 ttattaaatt aggtcgcttt ggaaaattct atgcatgtag caatttccca gactgtcgca
     3841 ataccaagca aatcactaaa gaaatcggtg tgacttgtcc ggtttgtcaa aaagggcaag
     3901 tgattgaacg caagagtaaa cgtaatcgtc ttttctatgg ttgcgatcgc tacccagagt
     3961 gtgaatttac ttcttgggac aagccagtcg ggcgttcttg tccgaaatgc gaccactatc
     4021 tcgttgagaa aaaagttcgt ggtggtggta aacaagttgt ctgtccaaat ggagactacg
     4081 aagaagacaa gattaaataa gattaaactg ctattctcaa gggaatggca gttcagattg
     4141 cagacaaaca tcgttttggt gtttgtcttt tttaggctct ttgtcaactg tagtgggtag
     4201 acgaaaagct aacacctaga gaggacgaaa ttcgttctct catttttgat gttcaaagca
     4261 atatatatct tggttttaaa gttcgtaaag ttcctaaagc caaacgcttg cctcttgatg
     4321 tctttgatga gtttattggt cgcttccagc ttagcgtttg aatatggaag ctccatggcg
     4381 ctcgtgatgt acgttttata ctttagaaac gttttaaaaa cagttttaaa ggtaggattg
     4441 acaagatcca gattgtcttc tagaagctcg aagaaatatt tcgagttcat ctcttggaaa
     4501 tggaagagaa ggatttgata gagttcgtaa tagaatttca gttcctcaga gaaattcaat
     4561 gtcttctgga caacctctct cggtgttatt gtttgcccaa aagtgcgaga aaagaagcga
     4621 ttcagagaca gttttcgact atctttttgg agaatacgcc agtgattttt catggatcga
     4681 taaggtaggg aacgcgtatc gaaagtcttc ataatatcaa ttctagtcgt catcatagca
     4741 cggctcaggt gttggataat gtgaaatcta tcaaggacaa ttttagcttt tgggagtgaa
     4801 acagtctgag aatagactgt ttcagcctga gcctagagat aggagagcga aggggctgca
     4861 atttggagta tggtctaaac atagcatggt tacgacctcg acagtttctc tgactgccct
     4921 aggatacttg tagaaatagt tctttatggt tgcttggcgg ttattctcta gaatggtcac
     4981 aatgcgtctc gtctcaaaat cctgagcaat aaaggcgagt tttcccttgt tccgactaaa
     5041 ttcatcccag ctcaagactt ttggtaattt cgtaaaatca tgctcaaatt gaaactgagc
     5101 cagtttcctc tggacgaccg atacggagat atgtagtctc ctagcgatgg ctatattggt
     5161 catgttttct gtatggagtt gtgtcacttt ctcccaaata ggttgtgaaa tctgacagtt
     5221 tttcttgact agagttgtct cagctacagt cactttttgg caagatttgc attgaaaccg
     5281 ccgtttctta agcaagagga gggtcggaag gccctgacaa tccaaaatcg gaatctttga
     5341 cgacttttga aagtcgtact tgatacactt tccttggcaa tgaggacaac cagggctgtc
     5401 gtaatctagc tttgccctga tttctagatg ggtctgatgt ttcaaaatga agagaatttt
     5461 gatgtttttg tctttgattc caattagttc tgtggtatga tcttcgcttt tttatttcta
     5521 ggctcaggaa tccagagtca cttccctgac tctggattta ttccatatga gtctttctaa
     5581 tgtgagtgtg gttgcttttc attataggtc atatgggact ttttgtatat actcaaaaag
     5641 gctccataat ctctatggtg gatttaccca ctacagaaat tatagagc
//
LOCUS       DASFQS010000119         5587 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.123, whole genome shotgun sequence.
ACCESSION   DASFQS010000119 DASFQS010000000
VERSION     DASFQS010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5587
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.123"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            59..1402
                     /locus_tag="U1041_001993"
     CDS             59..1402
                     /locus_tag="U1041_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007517532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4769075.1"
                     /translation="MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGE
                     SKTGSGKTHTFLIPIFQKLNEELDQVQAVITAPSRELATQIYQAARQLASHSDIEVRV
                     TNYVGGTDKNRQIDKLQASQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLD
                     MGFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIE
                     NWLISTKGRDRNAQILEVTKLMQPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDI
                     PPRERKRMMNQVKNLDYQYIVATDLAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTG
                     RNGLSGIAITLYQPSDDADIRELEKLNIKFLPKEMKNDEFVDTYDRDRRANREKSREK
                     LDLEMIGLVKKKKKKVKPGYKKKIQWAVDEKRRKTKRVEARAKGRAERKAKRQTF"
     gene            1420..1644
                     /locus_tag="U1041_001994"
     CDS             1420..1644
                     /locus_tag="U1041_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4059 family protein"
                     /protein_id="HEM4769076.1"
                     /translation="MLQNILSFYLQGLLIASLLIITSSLVWFIWRATKGVDKTLQERQ
                     DFLFDLLMINVMTIPIAAFGVVGILLMFKA"
     gene            1658..2575
                     /gene="trxB"
                     /locus_tag="U1041_001995"
     CDS             1658..2575
                     /gene="trxB"
                     /locus_tag="U1041_001995"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEM4769077.1"
                     /translation="MYDTVVIGAGPAGMTAALYAGRSNLKVALLERGIYGGQMNNTAE
                     IENYPGYDHISGPALAEKMFEPLEKFGVDHIFGTLVRIEEEGQIKKVITEDGVLETKT
                     VVLAMGAKHRLLGIPGEDTYNSRGVSYCAVCDGAFFRGQKLLVVGGGDSAVEEALFLT
                     QFAESVTIIHRRDQLRAQKVIQDRAFANEKINFIWDSVVEEIKGDDLRVQSVVIKNVK
                     TEEVSELDFGGVFIYVGLDPMTDTVADLGITDEAGWVITNEKMETTQSGIYAIGDIRQ
                     NQLRQITTAVGNGAVAGQEVYNYITELAE"
     gene            2585..3124
                     /locus_tag="U1041_001996"
     CDS             2585..3124
                     /locus_tag="U1041_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEM4769078.1"
                     /translation="MFHIYDIQKNPDGISFDKTLDLQEELQARNGEVLGLSPVQVSGN
                     VRFESGFFFLDYQMTYDITLASSRSLQPVLLHEVQEVNELFVANEAVLKEQDLIDEDM
                     VLVVEDDHIVLEESVADNILLAIPIKVLTPEEEAGQELPSGQAWALMTEEDFQQKAQE
                     KKEANSPFAQLQGLFDSEE"
     gene            3212..4639
                     /gene="gndA"
                     /locus_tag="U1041_001997"
     CDS             3212..4639
                     /gene="gndA"
                     /locus_tag="U1041_001997"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HEM4769079.1"
                     /translation="MTKANFGVVGMAVMGRNLALNVESRGYSVAIYNRSADKTEDVVA
                     SNPGKNLVPSYDVESFVASIEKPRRIMLMVQAGPGTDATIQALLPHLDEGDILIDGGN
                     TFYEDTIRRSKELANSGINFIGTGVSGGEKGALEGPSIMPGGQKEAYELVADVLEEIS
                     AKAPEDGAPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSVDEMAD
                     IFTEWNKGELDSYLIEITADILKRKDDQGQDGPIVDYILDAAGNKGTGKWTSQSSLDL
                     GVPLSLITESVFARYISTYKDERVAASKVLPKPAPFAYEGDKAELVEKIRQALYFSKI
                     MSYAQGFAQLRVASKENNWNLPFGEIAKIWRAGCIIRARFLQKITDAYGRDEDLANLL
                     LDEYFLDVTAKYQQAVRDVVALAVQAGVPVPTFSAAITYFDSYRAENLPANLIQAQRD
                     YFGAHTYNRKDKEGIFHYDWYSESK"
     gene            4721..5410
                     /locus_tag="U1041_001998"
     CDS             4721..5410
                     /locus_tag="U1041_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEM4769080.1"
                     /translation="MAKKILIAGKERNLSHFVSMELQKKDYLVDYASTGKEAMSLAHE
                     TDFDLILMSFQLSDMSSKELATELLAIKPATVMIVVVEPTEVSQYGEEVLSYAVSYVV
                     KPFVISDLVEQISAIFRGRDFIDNNCKQVHMHAAYRDLKVDFQNRTVTRGDELINLTR
                     REYDLLATLMNSPEPVSREQLLERVWKYEAASETNVVDVYIRYLRGKLDLPHQDSYIK
                     TVRGVGYAMRD"
BASE COUNT         1668 a         1045 c         1322 g         1552 t
ORIGIN      
        1 tttgcttgtc cacctaaatc gtgctataat agagggaaat acaactaaag aggaaactat
       61 gaaatttaca gatatgaaac tcaagcctta tattcaggag gctttgaaag aaattaactt
      121 tgtccagccg acagaagttc aggagaaatt gattcctgtt gttttgtcag ggagagactt
      181 gataggggaa tcaaaaacag gttcgggtaa gacccatacc ttcttgatcc cgattttcca
      241 aaaattaaat gaggaattgg accaagttca ggctgttatt acagccccat ctcgtgaact
      301 ggctactcag atttatcaag cggcacgcca gttggctagt cattcggaca tcgaagttcg
      361 tgtgaccaat tatgttggcg gtacggataa gaaccgtcaa attgacaagc ttcaagctag
      421 tcagcctcac attgttgttg ggacaccagg gcgtatctat gatttggtca aatcaggtga
      481 ccttgctatc cataaagcca aaacctttgt ggttgatgag gcagatatga ccttggacat
      541 gggctttttg gaaacagttg ataagattgc tggcagcctg ccaaaagact tgcaatttat
      601 ggtcttttca gcgaccattc cgcagaaact ccaaccgttt ttgaaaaaat acttgtccaa
      661 tccagtcatg gaacaaatca agacccatac ggtcatttca gataccattg aaaactggct
      721 gatttcaacc aaggggcgtg accgtaatgc tcaaatcttg gaagtaacca agctcatgca
      781 accttacttg gccatgattt ttgtcaatac aaagacacgt gcagatgaat tgcatagcta
      841 tttgactgcg aacggtcttc gtgtcgcaaa aattcacggg gacattccac cgcgtgagcg
      901 caagcggatg atgaaccagg tgaagaactt ggactatcag tacattgttg caacggattt
      961 agcagcacgt gggattgata ttgagggtgt cagtcatgtc atcaatgatg caattcctca
     1021 agacctttcc ttctttgttc accgtgtggg acgcacaggg cgtaatggtt tatcaggcat
     1081 tgccattacc ctttatcagc caagcgatga tgcagatatt cgagaactag aaaaactcaa
     1141 tatcaaattc ttgccaaaag aaatgaaaaa tgacgaattt gtcgatacct acgaccgtga
     1201 ccgccgtgct aaccgtgaaa aatctcgtga aaaactagat ttggaaatga ttggcttggt
     1261 caagaagaaa aagaaaaaag tcaaaccagg ctacaagaag aaaattcaat gggctgttga
     1321 tgaaaaacgt cgcaagacca agcgagttga agcgcgtgca aagggtcgtg cagaacgtaa
     1381 agccaagcgt caaacctttt aaagtaatcg aggaaaaaga tgttacaaaa cattctaagt
     1441 ttttatttac aaggattgct aatagcttcc ttgttgatta tcacttctag tctggtctgg
     1501 tttatctggc gtgcgacaaa gggtgtggat aaaaccttgc aagaacgaca agatttcttg
     1561 tttgatttgt tgatgattaa tgtgatgaca attcccattg cagcctttgg agtagtggga
     1621 atcttattaa tgtttaaagc gtagaaggaa aaagtatatg tacgatacag ttgtaattgg
     1681 tgcgggtcct gcgggaatga ctgcagctct ttatgcaggg cgtagcaatt taaaggtagc
     1741 tcttttggaa cgtggtattt atggtggtca gatgaacaat accgcggaaa ttgaaaacta
     1801 tccaggctat gaccatattt caggtccagc cttggctgaa aaaatgtttg aacccttgga
     1861 aaaattcggt gtggaccata tttttggcac cctagtccgt attgaggaag aaggacaaat
     1921 taagaaagtg atcactgagg atggtgtttt ggagacaaag acagtcgttc tagccatggg
     1981 ggcaaaacat cgcttgttag gtattccagg tgaggatact tacaatagcc gtggtgtctc
     2041 atattgtgca gtctgtgacg gtgccttctt ccgtggtcag aagctcttgg tagttggcgg
     2101 aggtgattct gcggtcgaag aagccctctt cttgacacaa tttgcggagt ctgtgacaat
     2161 tattcaccgc cgtgatcagc ttcgtgctca aaaagtcatc caagaccgcg cttttgccaa
     2221 tgaaaaaatc aacttcatct gggatagcgt agtcgaagaa atcaagggtg atgacttacg
     2281 tgtacaaagc gtggttatca aaaatgtgaa aactgaagaa gtcagtgaac ttgatttcgg
     2341 cggtgtcttt atctatgttg gtctggatcc gatgactgat acagttgcgg acctaggaat
     2401 tacagacgaa gctggttggg ttatcactaa tgaaaagatg gagacgactc aatcaggcat
     2461 ctatgccatc ggtgatattc gtcaaaatca acttcgtcag attacgacgg ctgttggaaa
     2521 tggtgcagtt gctggacaag aagtctataa ctacatcaca gaactagctg aataggggaa
     2581 tacaatgttt catatttacg atattcagaa aaatccagat ggaatctcct ttgataaaac
     2641 cttggattta caggaagaat tgcaggctcg aaatggtgaa gttctaggct tgtcgcctgt
     2701 acaagtaagt ggaaatgttc gctttgagtc aggtttcttt ttcttggatt atcagatgac
     2761 ttacgatatt accttggcat ccagtcggtc tctgcaacct gtcctgttac atgaagttca
     2821 agaggtcaat gaactctttg ttgccaatga ggctgttctc aaggagcagg acttgattga
     2881 tgaggatatg gtcttggtgg tggaagatga ccacatcgtc ttagaagaaa gtgtggcgga
     2941 taatattcta ctagccattc ctatcaaggt tttgacacct gaagaagaag ctggacagga
     3001 actaccatct ggtcaagctt gggctttaat gactgaggaa gattttcaac aaaaagctca
     3061 agagaaaaaa gaggccaata gtccttttgc ccaattgcag ggcttgtttg atagtgaaga
     3121 atagtttgga tagttaaatt atctgaaaat tcttgtcaac tttccccatt cagtgtataa
     3181 tgaaggggat acaaattaga ggagtaaaca aatgactaaa gcaaattttg gtgttgtagg
     3241 gatggccgtt atgggccgca accttgcact taacgttgaa tcacgtggct attcagtagc
     3301 tatttacaac cgctctgctg ataaaacaga agatgttgtt gcaagcaatc caggtaaaaa
     3361 cttggtacca agttacgatg tggaaagctt tgtggcatct atcgaaaaac cacgtcgcat
     3421 catgcttatg gttcaagctg gtcctggtac agatgcaacc attcaagcgc tcttgccaca
     3481 cttggatgaa ggtgacatct tgatcgatgg tggtaatact ttctacgaag acactatccg
     3541 tcgttcaaaa gaattggcaa actcaggtat taacttcatc ggtacaggtg tatctggtgg
     3601 tgaaaaagga gctcttgaag gtccatctat catgcctggt ggtcagaaag aagcttacga
     3661 attggtagca gatgtcttgg aagaaatttc agcaaaagca ccagaagatg gagcgccatg
     3721 tgtgacttat atcggtccag atggagctgg tcactacgta aaaatggtac acaacggtat
     3781 cgagtatggc gacatgcaat tgattgcgga gtcttatgac ctcatgcaac acttgctcgg
     3841 tttgtctgtt gatgaaatgg ctgacatctt tactgagtgg aacaaaggcg aattggatag
     3901 ctacttgatt gaaatcacag cagatatttt gaaacgtaaa gacgatcaag gtcaagatgg
     3961 accaatcgtt gattacattt tggatgcagc tggtaacaag ggaactggta aatggacaag
     4021 ccaatcatca cttgacttgg gtgtgccatt atcattgatt acagaatctg tatttgctcg
     4081 ttatatctca acttacaaag atgagcgtgt ggcagcaagc aaggtccttc caaaaccagc
     4141 tccgtttgca tacgaaggtg acaaggctga attggtagaa aaaatccgtc aagcattgta
     4201 cttctcaaaa atcatgtctt atgcacaagg ttttgcacag ttgcgcgtag catcaaaaga
     4261 aaacaactgg aacttgccat ttggtgaaat cgcaaaaatc tggcgtgcag gttgtatcat
     4321 ccgcgctcgt ttcttgcaaa agattacgga tgcctacgga cgtgatgaag acttggcaaa
     4381 cttgctcttg gatgagtact tccttgatgt aacagctaag tatcaacagg cagttcgtga
     4441 tgttgttgcc ttggcagttc aagcaggagt tcctgtacca acattctcag cagctattac
     4501 ctacttcgat agctaccgtg ctgaaaactt gccagcgaac ttgattcaag cacaacgtga
     4561 ctactttggt gctcacactt ataaccgtaa agataaagaa ggaatcttcc attacgactg
     4621 gtatagcgaa tcaaaataga aaagatgggc gtggaagcgc ccttctttct agtcataata
     4681 cgattcctac accatttgaa agaatagaaa aggatggata atggctaaga aaattttgat
     4741 tgctggtaaa gaacgcaatc tctcgcattt tgtttccatg gaattgcaga aaaaagacta
     4801 tcttgttgat tatgcatcga cagggaaaga ggctatgtcc ttggcacatg aaacggattt
     4861 tgacttgatt ctgatgagtt ttcagctttc agacatgtcc agcaaggaat tggctacaga
     4921 actattagcg ataaaaccag ccacggtcat gattgtggta gttgagccga cagaagttag
     4981 tcaatatggg gaagaagtcc tctcttatgc tgtttcctac gtagtgaagc cctttgtcat
     5041 cagtgattta gtggagcaaa tctctgcgat ttttcgtggt cgtgatttta ttgacaataa
     5101 ttgtaaacag gttcacatgc atgcggccta tcgtgatttg aaggttgatt ttcaaaatcg
     5161 aacagtgact cgaggtgatg aattgattaa tttgacccgc cgagagtatg atctgctggc
     5221 aaccttaatg aatagcccgg agcctgttag tcgagaacaa cttcttgagc gtgtttggaa
     5281 atatgaagcg gcttctgaga ccaatgtcgt cgatgtatat attcgctatc tacgtggtaa
     5341 actggatttg ccacatcaag attcatatat aaaaacagtt cgtggtgtcg gatatgccat
     5401 gcgtgattga tttagagtag agtggaggga gtgagaaaga actctatttt tcaaaaatga
     5461 gttcgtcaac aagtctttat ttctagttgt cgagctgaaa cagtctattc ccagactgtt
     5521 tcactcccac cccgcatagt tccaactgtc tgggggacag ttggaagttg gaaatagagc
     5581 gaacaaa
//
LOCUS       DASFQS010000120         5476 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.124, whole genome shotgun sequence.
ACCESSION   DASFQS010000120 DASFQS010000000
VERSION     DASFQS010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5476
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.124"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            104..1996
                     /locus_tag="U1041_001999"
     CDS             104..1996
                     /locus_tag="U1041_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006737096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEM4769081.1"
                     /translation="MERFEIIDKIGSSFYSSNLENGEFSYSKGLKSIGKSISDYRNSN
                     SKKKHNYLDIRFENDRLAILVETKNRFDNWDKTEIQQQLQEYVKYEKVYSDRKIVAIL
                     AETEGNNVWTWYGQSVIIDDEHVATNLSTILSFEEYEELCFGKVNDKLKVVDSIKVLN
                     ELLHSDGITEKLRSQFVGTCLLSLKNGLVYEGIKPTKDKSGKELKPEQVILKNIKEIL
                     EGLLSQGGDLNKVGKLAILNNKVLEDQDVTSLSYQELKSLLAYIDNNIVPYINDKNTA
                     GQDLLNLFFTTFNKYVGKSDKNQAFTPDHICDFMSKVVNVNKNSRVLDPCCGSGAFLV
                     RAMTDAMDDCNTENERDTVKKSQIFGIEYEDGAFGLSSTNMLIHGDGNSNIIQDSMFN
                     KGKWITDANIDVILMNPPYNATKKSCDPEYTKKWASKVTQDPSKGLHFVEWVARQVTG
                     QGEDKTIKNKTAKIAVLLPMQAAIGNSKETKLFKKKMLEKYTLEAVFSLPDEMFYPGA
                     SAVACCMIFDLSQNHTKSDKDTFFGYFKDDNFIKRKGLGRVEKVDSNGDSLWEQVKSN
                     WLSLYRNKREVAGLSVMKKVSYDDEWLAEAYMETDYSTLTSDDFQQTINHYLSFLVKE
                     GEYGND"
     gene            1983..3086
                     /locus_tag="U1041_002000"
     CDS             1983..3086
                     /locus_tag="U1041_002000"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4769082.1"
                     /translation="MAMIDTRDWEFFDFPKVFRMENGFYNKKPESNGEGTIPFIGATD
                     KNNGVTDYFTIEEIESTSKTGDEPNQELDVKLFASHALCVTNNGSVGYAYYQDKPFTC
                     SHDVNPLYRIDGDFNEFTALFVATVIMHDRYRWGYGRKWRPKRMKYSRLKLPIQKETN
                     GEPILDVSKRYSDSGFIPDWDFMENFIKSLKYKLPETKRNTYVDISSQNWVSFTLEEL
                     GIEIYKAKAHSKVDMDFSKSRQLDRLPFVSRTELNNSVDGWIFKDEESGIEEGNALVV
                     GDTTSTISYQPNPFVAGDHIVVIRAEWLNKYTGLFIQTLLNKERYRYSYGRAFKMDLI
                     KKTKLLLPVNHNKEIDWRWIENYIQTLPYSENI"
     gene            complement(3221..4084)
                     /locus_tag="U1041_002001"
     CDS             complement(3221..4084)
                     /locus_tag="U1041_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010782381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HEM4769083.1"
                     /translation="MANITDFTEKQFEDRLEKNVERLTKNRLAVESPTAFLLGGQPGS
                     GKTSLRSAISEETQGNVVIIDNDTFKQQHPNFDELVKLYEKDVVKYVTPYSNRMTEAI
                     ISRLRDKGYNLVIEGTGRTTDVPIQTATMLQAKDYETKMYVMAVPKINSYLGTIERYE
                     TMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETP
                     SISPKETLERELNRKVSGKEIQPTLERIEQKMVQNQHQETPEFKAIQQKMESLQPPTP
                     PIPKIPKLPGL"
     gene            complement(4086..4358)
                     /locus_tag="U1041_002002"
     CDS             complement(4086..4358)
                     /locus_tag="U1041_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002333002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HEM4769084.1"
                     /translation="MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELDTKNTRLLEV
                     NLLNQLEVAQEVDLFQQPFEELQAIHEYWRSMNQYSKQILTKEKVA"
     gene            complement(4376..4585)
                     /locus_tag="U1041_002003"
     CDS             complement(4376..4585)
                     /locus_tag="U1041_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000527318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
                     /protein_id="HEM4769085.1"
                     /translation="MGNLGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIETAK
                     NGGNVKEVMDQALEEYIRKYLPDKL"
     gene            complement(4683..5471)
                     /locus_tag="U1041_002004"
     CDS             complement(4683..5471)
                     /locus_tag="U1041_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010782382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEM4769086.1"
                     /translation="MIILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLT
                     KDLAKTFEVELPRVNFYEGLKNGNLASSIVHLTDNLDLIPGTFDLMLLPKLTRSWTFE
                     NESRLLATLLAPLKSDYDLIIIDTVPTPSVYTNNAIVASDYVMIPLQAEEESTNNIQN
                     YISYLIDLQEQFNPGLDMIGFVPYLVDTDSATIKSNLEELYKQHKEDNLVFQNIIKRS
                     NKVSTWSKNGITEHKGYDKKVLSMYENVFFEMLERIIQLENEKE"
BASE COUNT         1765 a          874 c          957 g         1880 t
ORIGIN      
        1 ctgattatgt aatcggacgt gttttttgtc aacccctaaa acaggctttt tcacgttttt
       61 gtgaggaggc tatttatttt atcaataatt tcgaggtgct atgatggagc gttttgaaat
      121 tattgataaa atagggagtt ccttctattc ttctaatctt gaaaatgggg aatttagcta
      181 ttctaaaggc ttgaaatcta taggtaaatc tatctctgat tacagaaaca gcaattcaaa
      241 gaaaaaacac aactacttag atattcgttt tgagaatgac cgactagcta ttttagtaga
      301 aactaaaaat agatttgata attgggataa gactgaaatt caacaacaac tacaagagta
      361 cgtaaagtat gaaaaggtat attctgatag aaaaatcgtt gctattttag ctgaaacaga
      421 aggtaataat gtttggacat ggtacggtca atcagttatt attgatgacg aacacgtggc
      481 taccaactta tcaacaattc tgtcatttga agaatatgaa gaattatgct ttggcaaagt
      541 aaatgacaag ctaaaagtgg tagattcaat taaagtattg aatgagttac tgcattctga
      601 tggaatcact gagaaattac gtagccaatt tgtaggaact tgtttattat cactcaaaaa
      661 tggacttgtt tatgaaggaa ttaaaccaac taaagataaa tctggaaaag agttaaaacc
      721 agaacaagtt atactaaaaa atatcaaaga aattttggaa ggcttacttt ctcaaggagg
      781 agacttaaat aaagttggga aattagcaat actcaataac aaagttttgg aagaccaaga
      841 tgtaacaagt cttagctatc aggaattaaa atccttatta gcttatatag acaacaacat
      901 tgttccgtat atcaatgaca aaaatacagc aggtcaggat ttattaaatc tattctttac
      961 aacttttaac aaatatgtag gaaaatcaga taaaaatcaa gcttttaccc cagaccatat
     1021 ttgtgatttt atgagtaaag ttgtcaatgt taacaaaaat tctcgtgtac ttgacccctg
     1081 ttgcggtagc ggtgctttcc tagttagagc catgacagat gctatggatg attgcaacac
     1141 agagaacgaa cgtgatactg ttaagaaaag tcaaattttt ggtatagaat atgaagatgg
     1201 agcattcggt ctatcatcaa caaatatgtt gatacatgga gatggtaatt caaatattat
     1261 tcaggattct atgtttaata aggggaaatg gattacagat gcaaacatag atgttattct
     1321 tatgaacccg ccatataatg ctaccaaaaa gagttgtgac cctgaatata caaaaaaatg
     1381 ggcttccaaa gttacacaag acccttcaaa aggacttcat tttgtcgagt gggtcgctcg
     1441 gcaagtaact ggtcaaggcg aagataagac cattaagaat aaaactgcca aaatcgctgt
     1501 tttacttccc atgcaagctg ctattggcaa tagcaaagaa actaaattat ttaagaaaaa
     1561 gatgcttgaa aaatatactt tagaggctgt cttttcttta cctgatgaaa tgttctatcc
     1621 cggtgcttca gctgttgctt gctgtatgat atttgattta tctcaaaatc atactaaatc
     1681 tgataaggat accttctttg ggtattttaa agatgataat tttatcaaaa ggaaaggctt
     1741 aggtcgtgtt gagaaagttg atagcaacgg tgatagctta tgggaacaag taaaatccaa
     1801 ttggctatca ttgtatagaa ataagcgtga ggttgcaggg ttatctgtta tgaaaaaagt
     1861 tagctatgac gatgagtggt tggcagaagc atatatggag acagattatt caacactaac
     1921 ctctgatgat tttcaacaaa ctatcaatca ctatctatct ttcttagtaa aagaaggaga
     1981 atatggcaat gattgatact cgagattggg aattttttga ttttcctaaa gtgtttcgca
     2041 tggaaaatgg tttttataat aagaaacccg aatcaaacgg agaaggaact attccattta
     2101 taggagcaac tgataagaat aatggagtga cagattattt caccatagaa gagattgaat
     2161 caacttccaa aacaggagat gagcctaatc aagaattaga tgttaaattg ttcgcatcac
     2221 acgctctctg tgttactaac aatggttctg ttggttatgc ttattaccaa gataaaccat
     2281 ttacttgtag ccatgatgtt aatcccttat atcgtattga tggtgatttc aatgaattta
     2341 cagcattatt cgttgcgacg gtcataatgc atgatagata cagatggggg tacggacgga
     2401 aatggcgtcc taaaagaatg aaatactcca gattaaaact tcctattcaa aaagagacca
     2461 atggagaacc tattcttgat gtaagtaaac gatactccga ttctggtttt ataccagatt
     2521 gggattttat ggaaaacttc atcaaatcac taaagtataa actgcctgaa actaaaagaa
     2581 acacttatgt tgatatttct tcccaaaact gggtttcatt tacattagaa gaactaggta
     2641 ttgagatata caaggctaaa gcccattcta aagttgatat ggatttttct aaaagtagac
     2701 aactagatag gttaccgttc gttagtagaa cagagttaaa taactctgta gatggctgga
     2761 tttttaaaga tgaagaaagt ggtattgaag aaggaaatgc tcttgttgta ggagatacaa
     2821 cttcaacaat ttcctatcaa cctaatcctt ttgttgcagg cgaccatatt gttgtaatta
     2881 gagctgaatg gctaaacaaa tatacaggtc tatttataca aactttacta aacaaagaga
     2941 gatataggta ttcgtatgga cgagcattta agatggattt aattaaaaaa acaaaattat
     3001 tgttaccagt aaatcacaat aaagaaattg attggagatg gattgaaaat tatatccaaa
     3061 ctttaccata ttcagaaaat atctaaatac aaaaagacga tttcctagtt tggaagtcgc
     3121 cttttttgat gttgtcgaaa tactacatat tgtggttggt gtaaactgat atatagttcc
     3181 cattctttat ttaaaacttt gcaacagaac cttttaaggt ttaaagtcct ggaagcttag
     3241 gtatttttgg tattggtggt gtaggtggct gcaagctttc cattttttgt tgaattgctt
     3301 taaattcagg ggtttcttgg tgttgatttt gaaccatttt ttgctctatt ctctccaaag
     3361 tcggttgaat ttctttccct gatactttac gatttaattc tctttctaag gtctctttcg
     3421 gactaatgga aggcgtttct aagcttgaat agagtttcac tccttctcta ttgtaaagcc
     3481 ttatatcgct aaataagccc gttttatgaa gggtttctaa attggtcggt aagtttttga
     3541 caacaatatc atgcgcttgt tttggtgttg ccctggctgt cattggatca tctgcataca
     3601 tagtttcata ccgttcaatt gttcctaaat atgagttgat tttaggtact gccatgacat
     3661 acatttttgt ttcataatct ttggcttgaa gcattgttgc ggtttgaata ggaacgtctg
     3721 ttgttcgtcc tgtaccttca atcactaaat tatacccttt atctctcaaa cggcttatga
     3781 tcgcttctgt catgcgatta gaataagggg taacgtattt tactacgtct ttttcataaa
     3841 gtttcactag ttcatcaaaa ttagggtgct gttgtttgaa cgtatcatta tcaatgataa
     3901 caacatttcc ttgtgtctct tcggaaattg ccgatcgcaa actagtttta cctgatcctg
     3961 gttgcccacc aagtaaaaaa gcggttggcg attcaaccgc tagtctattt ttagttagtc
     4021 gttcaacatt cttttctaaa cgatcttcaa attgcttttc ggtgaagtca gtaatattcg
     4081 ccatgttaag ccactttctc ttttgtcaaa atttgttttg aatattgatt cattgaccgc
     4141 caatactcat gaatagcttg taattcttca aatggttgtt gaaataaatc aacttcttgt
     4201 gccacttcta attgatttaa aagattcact tctagtaaac gagtattttt agtatctagt
     4261 tcatggttca aaacatagtt taatactcga ttataaacgc ttgccgataa ttcgttaatg
     4321 atctctattt caaatgtttt ttcatacgta actgccattt cattttcact cctttttaaa
     4381 gtttatcagg taaatatttc cgtatatatt cttctaaggc ttgatccata acttctttta
     4441 cgtttccgcc attttttgct gtttcaattt ttataatatg gtgtaagtca gcacgaacac
     4501 gaaccgtctt atctcccatt atatcttttt ttgcactgat tggtgtatca tttcgttttg
     4561 ctttttgtgc gcctaaattt cccacaatca ctcacttctt tctatttctt cttattctta
     4621 ttttatcatc aacaatcaca aatcacaagt gatttgtgat taatcacttg tgatttgtga
     4681 ttctattctt tttcgttttc taattgaata attcgctcaa gcatttcaaa aaatacgttc
     4741 tcatacatgg ataaaacttt tttgtcatag cctttgtgtt ctgtaattcc atttttagac
     4801 caggtactta ctttattact tcgcttgata atattttgga aaaccaagtt atcttcttta
     4861 tgttgcttgt acagttcttc caggtttgat tttatcgttg cgctgtccgt atcaactaaa
     4921 taaggaacaa aaccgatcat atctagtcca gggttaaatt gttcttgtaa atcaatcaaa
     4981 taggaaatat agttttgaat gttgtttgta ctttcttctt ctgcttgtaa agggatcata
     5041 acgtaatcac tcgccacgat tgcattattt gtataaacgc ttggcgttgg tacagtatca
     5101 ataataatga gatcatagtc actttttaaa ggtgctaaaa gagtagcaag caatctactt
     5161 tcattttcaa aagtccatga gcgagttaat tttggcagta acatcaaatc aaacgtgcca
     5221 gggatcaagt ctaaattatc agtcaaatga acaatagaag aagccaagtt tccatttttc
     5281 aagccttcat aaaaattgac acgtggcaat tctacctcaa aagtttttgc taagtctttt
     5341 gtcaatgttg cctgtaagtc cttatcgatc attaaaactt ttaaattcaa tttgtctgtc
     5401 aagtaagcaa acatagtcga taatttggac tttccaacac cacctttaaa gtaattattc
     5461 aagataataa ttgctt
//
LOCUS       DASFQS010000121         5410 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.125, whole genome shotgun sequence.
ACCESSION   DASFQS010000121 DASFQS010000000
VERSION     DASFQS010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5410
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.125"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            21..1337
                     /locus_tag="U1041_002005"
     CDS             21..1337
                     /locus_tag="U1041_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769087.1"
                     /translation="MCYNHLMKKISDLGLTGRKLVGEGFILVLVGLGFLIAGWQFPGL
                     ILRFVHAGLFFLALYELSMIFFRKKKSSESVIALVGKAVLFGILASLDLAVQIPLYFA
                     AIFVGIYQLFTAVINFITFYLYRKDGVQPRIRYLIDGIWLSLLGSASLFVSGTQLVVQ
                     TIVIGGYLVLYGLTNLRDGFLFEEAIEQQNLKRHVRLPLPLFLAALIPRMTLQKVNDY
                     LADNEGQTAQSIYNRHKEIAELPALEVFVHVGEEGFGAVGHVDLSYKGQVYGYGSYDV
                     LSERLGGAIGDGVLFKAERQAYIDFCNQEGMTMLGYQLSLTPEQEEAVEARLAEIDNL
                     LLPWNPSPEKVSKTADGQPIEMYAYRMKEEIGAALFKFKKSKFKTYFVLSTNCVLLAD
                     SVIGQAGTDVLGLRGFIAPGTYQSYLDQEYEKPYSLVVAKNIYYRK"
     gene            1422..4058
                     /gene="polA"
                     /locus_tag="U1041_002006"
     CDS             1422..4058
                     /gene="polA"
                     /locus_tag="U1041_002006"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEM4769088.1"
                     /translation="MKKNKLLLIDGSSVAFRAFFALYNQIDRFKNANGLHTNAIYGFN
                     LMLDHMMKRIEPTHILVAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPFIRQMLDA
                     MGVKHYELDQYEADDIIGTLDKMAERTDIPFDVTIVSGDKDLIQLTDENTVVEISKKG
                     VAEFEEFTPAYLMEKMGITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL
                     DGIYENIDSMKASKMKENLIADKEQAFLSRTLATIDTNAPIEIGLDDIVYQGPKLEEL
                     GQFYDDMGFKQLRDQLGTTSSQEEAVLDFQIVTEISPAMLKQDQFFYFEILDENYHRE
                     DLVALAWGDKEKIYVGGSELLDSPVLRDFLEKQTIKTYDFKRGKVLLDRKEITLPPAT
                     FDSRLAKYLLSTVEDNSLTTIANLYGQTSLVPDEAVYGKGAKLDLPEREIFFPHLARK
                     VQVLIETEEPMLTKLEENQQLDLLFDMELPLANVLAKMEIAGIKVEAETLKAMQSENE
                     VLIDQLTKEIYELAGQEFNINSPKQLGTILFEEMGLPLEYTKKTKTGYSTAVDVLERL
                     APIAPVVSKILEYRQITKLQSTYVVGLQDAILEDGKIHTRYVQDLTQTGRLSSTDPNL
                     QNIPVRLEQGRLIRKAFVPSLENSVLLASDYSQIELRVLAHISQDQHLIEAFQQGADI
                     HTSTAMRVFGIEKAEDVTPNDRRNAKAVNFGVVYGISDFGLSNNLGITRKEAKAYIDT
                     YFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFAERTAINSPI
                     QGSAADILKVAMINLDKALTEAGLATRMLLQVHDEIVLEVPVAELETVKAMVKETMES
                     AISLSVPLIADENEGPTWYEAK"
     gene            4071..4826
                     /locus_tag="U1041_002007"
     CDS             4071..4826
                     /locus_tag="U1041_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEM4769089.1"
                     /translation="MKKIVLCIGLCSLLLAGCGKTAQKAEKTPASSGEEFSTTLPILQ
                     EKQDTTNEQFNVLANAELVAVNSTPPADETQKGHKIYAANNGVAEKDENGNIKEYFRY
                     YDVPSTWTINAENTQDETVAAVYDVKEGSSNYMVQLYNINAFNQSPLEDGRNMTPEEL
                     EARMLETNHSFSEKTVVTINGQEWQVGRQLLTDQKLARLTFYRMESTAAYDDSVVVGS
                     IYYSLDPGTDKDRTNLKKVIGQVKDVVYQIAKK"
     gene            4946..5383
                     /locus_tag="U1041_002008"
     CDS             4946..5383
                     /locus_tag="U1041_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEM4769090.1"
                     /translation="MSYSFQNPSQDIILDYLKNAKTIAVVGLSSREETAAYRVSKLMQ
                     EAGYKIIPVNPKAAGGTILGELVYSSLAEIDQPIDIVDVFRRSEFLPEVAQEFIQSNA
                     KVFWAQLGLESQEAEKLLRQAGRNDIVMNKCIKIEYLEMKEQY"
BASE COUNT         1628 a         1064 c         1205 g         1513 t
ORIGIN      
        1 ttgcaaacat aagtctagaa atatgctata atcatctcat gaaaaaaata agtgatttag
       61 gattaactgg cagaaagtta gttggtgaag gttttatttt ggtccttgtt ggacttggat
      121 ttttaattgc tggctggcaa tttccaggac tgattcttcg atttgttcac gcaggtctat
      181 tctttttagc tttatatgaa ctgagcatga tatttttcag aaagaagaaa tcgagtgaaa
      241 gtgtcattgc gctagttggg aaggctgttc ttttcgggat cctagccagt ctcgatttag
      301 ctgttcaaat tcccctctat ttcgcggcta tttttgttgg gatttatcag ctttttacgg
      361 cagtcattaa ttttattact ttttacctat atcgaaaaga tggggtacag ccacggattc
      421 gctatttaat agatggaatt tggttatcct tactaggttc agcttcccta tttgtgtcag
      481 gcacacagct ggttgttcaa accattgtca tcggaggtta tctggtcttg tacggactaa
      541 ctaatctgcg tgatggtttc ttgtttgagg aggctattga gcaacaaaat cttaagcgcc
      601 atgtccgttt gcccctacct ttatttttag cagctttgat tcctcgtatg accctgcaaa
      661 aagtcaatga ttacttggcg gataatgagg gacaaacggc tcagtctatc tacaaccgcc
      721 acaaagaaat tgcggagctt ccagcattag aagtctttgt acacgttggg gaagaagggt
      781 tcggagcagt tggacatgtt gatttgagtt acaaaggaca ggtttatggt tatggttcat
      841 acgatgtcct gtctgagcgt ttgggtggtg cgattggtga tggagtcttg ttcaaagcag
      901 agcgccaagc ttatattgat ttctgtaacc aggaaggtat gaccatgttg ggttatcagc
      961 taagcctgac acctgaacag gaagaagcag ttgaggctcg attggctgaa attgataatc
     1021 tgctcttacc ttggaatcca agtcctgaaa aagtatcgaa aacggcagac ggccagccta
     1081 tcgaaatgta tgcctatcga atgaaagagg aaattggggc agcacttttc aaatttaaaa
     1141 aatcaaaatt caaaacctac tttgtcctct caaccaactg cgtccttttg gctgattcag
     1201 taatcggtca agcaggaaca gatgtcctag gcttgcgcgg cttcattgct ccaggaacct
     1261 accaatctta cctagatcaa gaatatgaga aaccttatag tttagtagtc gcaaagaaca
     1321 tttattatcg aaaatagaaa tcctagtcac tgactgggat tttctgttat ttcagctctc
     1381 taagtcccac aaaactcccc catccatgct ataatagaga catgaaaaaa aataaattac
     1441 tactcatcga tggctcttcc gtagccttcc gtgccttctt tgcactttat aaccaaattg
     1501 accgcttcaa gaatgccaac ggtctgcata ccaatgccat atacggcttc aatctcatgt
     1561 tggaccacat gatgaagcgg attgagccga cccacattct tgtggctttt gatgctggaa
     1621 agaccacttt ccgtacggag atgtatgcag actataaggc aggtcgtgcc aagactccag
     1681 acgaattccg tgaacaattt ccctttatac gtcagatgtt ggatgccatg ggggtcaaac
     1741 actatgagct ggatcagtac gaggcggacg atattatcgg taccttggac aaaatggcag
     1801 agcggacaga cattcccttc gatgtgacca ttgtcagcgg tgacaaggac ttgatccagc
     1861 tgactgatga gaacaccgta gtcgaaattt ccaagaaagg cgtagccgaa ttcgaagaat
     1921 ttaccccagc ctacctcatg gaaaaaatgg gcatcactcc cactcagttt attgacctca
     1981 aggctctaat gggcgataag tccgataata tccctggcgt gaccaaaatc ggtgaaaaaa
     2041 caggtctaaa actcctgaca gaatttggtt ctttggatgg tatctacgaa aacattgaca
     2101 gcatgaaggc atctaagatg aaagaaaacc tgattgcgga taaggaacaa gcatttcttt
     2161 ctcgaaccct tgccaccatt gacaccaatg ctccaatcga aattggtctg gatgacattg
     2221 tttatcaagg tccaaagcta gaagaactag gacaattcta cgatgatatg ggcttcaagc
     2281 aattaaggga tcagttaggt acgaccagct cgcaagagga agcggtactc gatttccaaa
     2341 tcgtaacgga aatcagcccc gctatgctca aacaagacca gtttttctat tttgaaatct
     2401 tggatgaaaa ttatcaccga gaggatttgg ttgctttagc ttggggagat aaggagaaaa
     2461 tctatgtcgg agggtctgag ctacttgata gtccagtctt gcgtgacttt ttagaaaaac
     2521 aaaccataaa aacctatgac tttaagcgtg gaaaagttct tctcgaccga aaagagatta
     2581 cgctacctcc agctactttc gatagccgtc tagccaaata cttgctttcc accgttgagg
     2641 acaattccct aacaaccatt gccaatctct atggtcagac cagtcttgtt ccagatgagg
     2701 cagtttatgg caagggtgct aagttagact tgccagaacg cgagatcttt ttcccacact
     2761 tggcacgtaa ggttcaggtt ttgattgaga cggaagagcc gatgttgacc aaattagaag
     2821 aaaatcagca attagatctt ttgtttgaca tggagttgcc actggcaaat gttttagcta
     2881 agatggaaat tgctggtatt aaagtggaag ctgagactct caaagctatg caatctgaaa
     2941 acgaagtttt gattgaccag ttgaccaagg aaatctatga actagctggt caggaattta
     3001 atatcaattc gcctaagcag cttgggacca ttctctttga agagatggga ctaccgttgg
     3061 aatataccaa gaaaaccaag acaggctatt caacagcagt agatgtctta gaacgattag
     3121 ctccaattgc accagttgtt tcaaaaatct tggaataccg tcagattacc aagcttcaat
     3181 caacttatgt agtcggcttg caggatgcca ttttagaaga tggtaagatc catacccgct
     3241 atgtacagga tttgacacaa acaggtcgtc tatcttcgac ggatcctaac ttgcaaaata
     3301 ttcctgttcg tctagaacaa gggcgcttga ttcgtaaggc atttgtgcca tcgcttgaaa
     3361 atagtgtcct tttagcatcg gactattcac agattgaatt gcgcgtcttg gctcatattt
     3421 ctcaggacca gcatttgatt gaggccttcc agcaaggtgc agatattcac acttcgacag
     3481 ctatgcgggt cttcggtatc gaaaaagctg aggatgtgac accaaatgac cgtcggaatg
     3541 ccaaggctgt aaacttcggt gttgtctatg gtatttcaga tttcggtcta tccaataact
     3601 tggggattac acgtaaggaa gctaaagcct atatcgatac ctattttgaa cgcttcccag
     3661 gaattaagaa ttacatggaa accattgttc gcgaggcacg tgataagggt tatgtagaga
     3721 cgatttacaa acgccgtcgt gaattaccag atataaactc tcgcaatttc aatgtccgta
     3781 attttgcgga acgaacagcc atcaactcac caattcaagg ttcggccgca gatattctca
     3841 aagtagccat gattaatctt gacaaggctt tgactgaagc aggtcttgcg acacgtatgt
     3901 tattgcaagt acacgatgag attgttttgg aagtcccagt ggcagagcta gaaacggtaa
     3961 aagccatggt aaaagagacc atggaatcgg cgattagcct gtctgtacca ttgattgcgg
     4021 atgaaaatga gggaccgaca tggtatgaag ctaagtaaga aaggaagagt atgaaaaaga
     4081 tagttctttg tattggtcta tgtagtcttc tgctcgcagg ttgtggaaaa acagcgcaga
     4141 aggcagagaa aacaccagct tcctcagggg aagagttttc aaccacttta ccgattttgc
     4201 aagaaaagca ggatactacg aacgaacagt tcaatgttct agcaaatgca gagcttgtag
     4261 ctgttaatag tacaccacct gctgacgaaa cacaaaaagg ccacaagatt tatgcggcca
     4321 ataatggtgt tgctgaaaaa gatgaaaatg ggaatatcaa ggaatatttc cgttattatg
     4381 atgtgccatc tacttggaca attaatgcag aaaatactca ggatgagaca gtcgctgcag
     4441 tctatgatgt taaagaaggt tccagcaatt acatggtcca actctataat atcaatgctt
     4501 ttaatcagtc tccattggaa gacggtcgca atatgacgcc ggaggaatta gaagcacgga
     4561 tgcttgaaac aaatcattct ttcagtgaaa agacggttgt cacaatcaat ggtcaggaat
     4621 ggcaggttgg gcgacagtta ttaacagatc aaaaattagc tcgtctgact ttttatcgga
     4681 tggaatcaac agctgcttat gatgactccg tggttgtggg ttcaatctat tattccttag
     4741 atccaggaac cgataaagat cggaccaatc ttaaaaaggt tatcgggcaa gttaaggatg
     4801 tcgtgtacca aattgctaaa aaataatcaa ggtagacaag ctataatcag taacgagtta
     4861 aaactgacaa gattgtgtta tagcacacct tattcattaa gcttttattg attctaacat
     4921 ttaatataga ttaaaggagg tctctatgtc ttattccttc caaaatccta gtcaggacat
     4981 tatccttgac tatctgaaaa atgctaagac cattgcagtg gtcggtttgt ctagtcgaga
     5041 agagacagca gcctaccgcg tttccaagct catgcaggaa gcgggctata aaattattcc
     5101 agttaatccc aaggctgctg gtgggactat tttaggcgag ttggtctata gtagtctagc
     5161 agagattgac caacctattg atattgtaga tgttttccgc agaagtgaat ttttaccaga
     5221 ggtagcacag gaatttatcc agtcgaacgc caaagttttc tgggctcaac tcggtttaga
     5281 aagtcaagaa gcagaaaaac tattgcgtca ggcaggtcgt aacgatattg tcatgaataa
     5341 atgtatcaag attgaatatc ttgaaatgaa agaacaatac taatagaggc tgggcagaaa
     5401 gtccatcctc
//
LOCUS       DASFQS010000122         5367 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.126, whole genome shotgun sequence.
ACCESSION   DASFQS010000122 DASFQS010000000
VERSION     DASFQS010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5367
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.126"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(331..1611)
                     /locus_tag="U1041_002009"
     CDS             complement(331..1611)
                     /locus_tag="U1041_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LlaJI family restriction endonuclease"
                     /protein_id="HEM4769091.1"
                     /translation="MLTVPNKSLLDMCRVATNMEGDTFVGIKAEIIEGVQEVTVNFPL
                     GFEIAKDAETARRDIIALVSVLQAHNDEESRLRTVDVNQALKTLNFPMEAYTFVIHDF
                     INRGTYYKETEEYYIQTLGGRINWSRTIKRVQPVVQGNGFKFLKMESKKQSDTDITLL
                     TEINKFCVYEAFLNMGWLYQLPLPEKARINYNRSQFESIIKKKMATTFNDMERRLFQS
                     MIDILNYKDRQEEPDKFYFGTNNFQFIWENLIDYTYGIANKSSYFPRTKWDLVFETKT
                     SKGYALEPDTIMVYNDNVFVLDAKYYKFGQTNLMKDLPPSTSINKQITYGEYVANQDS
                     LKKIHGQNSKVYNAFLMPFSKSHEIFQTDGMYQYIGEALGEWKGQDKTYERVQGILVD
                     VKTLVHNSARNRTQYIQELSDLISEKVDEKLANM"
     gene            complement(1592..2587)
                     /locus_tag="U1041_002010"
                     /pseudo
     CDS             complement(1592..2587)
                     /locus_tag="U1041_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057759.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            3292..4521
                     /gene="dcm"
                     /locus_tag="U1041_002011"
     CDS             3292..4521
                     /gene="dcm"
                     /locus_tag="U1041_002011"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011184708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEM4769092.1"
                     /translation="MTFNRHILESNRKLTTTNILSKKTPIAENLSGNDIKYLRKKYNL
                     TQKELADALGLQKFGDRTIRRWEAEETHPSKLEQSSIQSFFNSLKNPPFIISENLPFK
                     MIDLFAGIGGTRLGFQLTNEVETVFTSEWDKFAQKTYITNFGDTPEGDITQIDENTIP
                     DHDILVAGFPCQAFSQAGKRLGFEDTRGTLFFDVARIIKAKRPKAFLLENVKNLKTHD
                     KGKTYKIIISTLEDLGYSTSTVLFKARDFGVPQNRERIYIVGFDKTCVNNFSEFRFPE
                     PFHIETKLGNILQTDVDEKYTISDKLWEGHQRRKAEHKTKGNGFGYSLFNVDSPYTNT
                     LSARYYKDGSEILIEQKGKNPRKITPREAARLQGFPEEFIIPVSDTQAYKQFGNSVCV
                     PAIHEIAKQILAVLKNS"
     gene            4632..5321
                     /locus_tag="U1041_002012"
     CDS             4632..5321
                     /locus_tag="U1041_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003059249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4769093.1"
                     /translation="MFSNRRLKQRRLEIKLSQTAIANQLNVHRSAYHNWENGRNIPNQ
                     KNLTLLSKILDVPVTYFESEYNIVNNYLQLSPDNQIKAEEYVEGLLLSEQISNVTPLF
                     SVQVLSDVQLSAGLGEGFFDEFETETVYSNEEQYGYDIAAWIEGDSMEPIYKSGEVAL
                     IRSNGFDYDGAVYALSWNDSVYIKKLYRDEDGFRMVSLNKDYPEKFIPYEDEPKIVGL
                     VVGHFMPVEGV"
BASE COUNT         1808 a          955 c          815 g         1789 t
ORIGIN      
        1 gcactattaa tcttgtcaaa ggaaatactt gcactggaaa ttaatagagg attagctaaa
       61 gtccaaccta aaataaattt agatacttta ctacctgatt ggaatttacc agatttaatt
      121 tcagcatttt acttcacttt attttactca aaccctaaaa ttgctatgta taaaatttgc
      181 gagaatatag gatgtaacac cccattttat gttcaaaggt caaatacaat aaaaaaatat
      241 tgctctgaaa gttgtaagaa cgcttcttct cagagaagat atagaaataa acaaaaagac
      301 tttcagtgaa aattatcact gaaagtcttt ttacatattt gctaattttt catcaacctt
      361 ctcggagatt aaatctgata attcttggat atactgagtc cgatttctag cagaattatg
      421 taccaaagtt tttacatcga ctaaaatacc ttgaactcgc tcataagttt tatcctgacc
      481 cttccactca ccaagagctt ctccgatata ttgatacatt ccgtctgttt gaaaaatttc
      541 gtgactcttt gaaaatggca ttaagaatgc gttatatact ttagaattct gtccatgtat
      601 tttttttagc gaatcttgat ttgccacata ctcaccgtat gtaatttgct tattaatact
      661 tgttgacgga ggcaaatctt tcattaagtt agtttgaccg aacttgtagt attttgcatc
      721 taatacaaaa acattatcat tgtaaaccat aatagtatcc ggttctagtg catacccttt
      781 tgaagttttt gtctcaaaaa ctaaatccca ttttgttcta ggaaaatatg aagatttatt
      841 ggcaattcca tatgtataat ctattagatt ttcccagata aattggaaat tattagttcc
      901 aaaataaaac ttatccggtt cctcttgcct atccttataa ttaagtatgt caatcatact
      961 ttggaaaagt cttctctcca tatcattaaa agttgtagcc atcttttttt tgataataga
     1021 ctcaaactga gatctattat agtttatacg agctttttca ggtagcggaa gctgatacag
     1081 ccaccccata tttagaaacg cttcatatac acagaatttg tttatttccg ttaaaagagt
     1141 aatgtcagta tcactttgct ttttagattc cattttcaaa aatttgaatc catttccttg
     1201 aacaactggt tgaacacgtt ttatagtcct cgaccagtta attcggcctc ccaaagtttg
     1261 aatatagtac tcttcagttt ccttataata tgtaccacga ttaataaaat catgtataac
     1321 aaatgtataa gcctccattg gaaagtttaa cgtttttaga gcttgattca cgtctacagt
     1381 tcttaggcga gactcttcat cattatgagc ttgtaagacg gaaacaaggg caattatatc
     1441 tcttcttgct gtttctgcat cttttgcaat ctcaaaacct aatggaaaat tgacagtaac
     1501 ttcttgtaca ccttctatta tctcagcttt aataccaaca aacgtatcac cttccatatt
     1561 tgttgcaaca cgacacatat ccagtaagga tttattcggt actgtcagca tcttcttctc
     1621 ctgtgtcgat gttattatct tttaaagttg cctccctaag attttctaac tcctctttga
     1681 tatcttttgc gaaaacatca aaacgcccat tttcaggatt atcattatcc gtgaatcgct
     1741 taataattgc ctctaaactt ggatacaaag caacatcaaa gatatcttca cgattaaatt
     1801 tgaaggcatc atcccaaaga tatttcaaaa ctttttcagc aaagcgttta ttttttttat
     1861 tgaattcttt accaaaatca cctgctggta cttggcgtat ccgttcaata ttcaatacat
     1921 taccggaaat aaaatatgct cccattcgct tatcttcgga agttagagtc tgactactag
     1981 tctcaagaat ttttttattg ataactttgt tgaatacttt ccaagaatat tgtgtatcag
     2041 caataaaata attcccatat ttcgataaat caacatcatt ttcaatcatt tccattgtcc
     2101 atcgacgttg aaatgctgta tcaagagtga atacattttg gtctgcggta ttcattgttg
     2161 caagtaacga taagttagaa gggattttaa tttgatgaga cttatcacca taaatttccg
     2221 aagcaagtat tgaattgtta ataccgtaca cgctctcacc actagcactt ctatccaata
     2281 attgaaagat ttctccaaat attccgggag cattacctcg atttaactcc tcaattacaa
     2341 gataataatg ttcactagga ttagcaattg cttttttcac aattcttgta aaaggccctg
     2401 gtgaaaaaag gtaggtaata tctccattat cttttacagt aggcattatt tgaccaacaa
     2461 agtcagtatt catatagtct ggatgaaaga ctaatcgctc cattctattt tcatcattgc
     2521 aatattcagt agcaatttta taactttttc cagatccagg aaccccatag agaagaatat
     2581 tatcacccac aaggtttcta ttgtcatgag tggtagtaac tagactttgg ctttccattt
     2641 caacaagttc aaagtactta ttcacatcac ttaaatcaaa atctgcatca actagattct
     2701 ttacaattat tgctacatgt tcagaggaag cattaattaa ctttaataaa gctaaaattg
     2761 gtgatatata actatcaccc ctgtggattt ccttccctcc atgccaccaa tgataatcgg
     2821 taacaaattt ctttagaaac aacgtttcag tttcagatag acctaccgtg atagtatcaa
     2881 atacattttc gtctaattca ccatttctag ctgattggca aaattgttta aaatcatcgc
     2941 cagatagtgc gtccaacagg atggatttat acttaagaaa ttctttgtaa tatggagccg
     3001 ctataaaagc aagataaaac cattgattcg gaattattat aaacttacca ttagtgtgat
     3061 attttgaatt atactgttca aaataaattt catcacctac cgtatcaata tgttctttat
     3121 aattctcttt aaattcatta gagagaatta cctcagtgtc attttttgat agaaattccg
     3181 atgctattct gctttgttct tcaaaaataa atcctaaatc atttaacata attaggcctc
     3241 ctagattgac taatatcata aaatatgtta gagtgtcaat tataggacaa tttgaccttt
     3301 aatagacaca ttttagaaag taatagaaaa ttgactacta ccaatatttt atcaaaaaaa
     3361 actccaattg cagaaaatct ttcgggaaat gatataaaat atctacgaaa aaaatataat
     3421 ctcactcaaa aagaattagc agatgcactt ggtcttcaaa aatttggaga tagaaccatt
     3481 agacgttggg aagcagaaga aacacatcct tcaaaacttg aacagtccag tattcagtct
     3541 ttttttaatt ctctaaagaa tccgcctttt attattagtg aaaatcttcc gttcaaaatg
     3601 attgatcttt ttgctggaat aggtggaact agattaggtt tccaattaac aaatgaagta
     3661 gaaactgtat ttacaagtga atgggataaa tttgctcaaa aaacatacat tactaatttt
     3721 ggagatactc cagaaggtga catcactcag attgatgaaa atactatacc agatcatgat
     3781 atactcgttg ctggttttcc ttgtcaagct ttctcccaag caggtaaacg cctaggattt
     3841 gaagatactc gtgggacttt gttttttgac gttgctagaa taataaaagc taaacgtcca
     3901 aaagcttttt tacttgaaaa tgtcaaaaac ctaaagacac atgataaagg taagacatac
     3961 aagataatta tctcaactct tgaagattta ggatatagta catccactgt actttttaag
     4021 gccagagatt ttggtgtacc tcaaaaccga gaaaggattt atatagttgg atttgataaa
     4081 acttgtgtga ataattttag tgaattccgt ttccctgaac cgtttcatat agaaactaaa
     4141 ctaggaaata ttctacaaac tgatgttgac gaaaagtata ctatctccga taaactttgg
     4201 gaagggcatc aaagaaggaa agctgaacat aaaacaaaag gaaatggatt tggttactca
     4261 ctttttaatg ttgatagtcc atatacaaat acactttcag ctcgatacta caaagatgga
     4321 agtgaaattt taatcgaaca aaaaggaaaa aacccacgta aaattactcc acgagaagct
     4381 gctagactcc aaggtttccc tgaagagttt ataattccag tttctgatac acaagcatat
     4441 aaacaatttg gaaattctgt atgtgtacca gcaattcatg aaattgctaa acaaatacta
     4501 gctgtcctca aaaacagtta atatataaag tctatcaata caattgatag gcttttttta
     4561 attctagttg caaaatataa atattctgat ataattttgt tgagttataa ctagacataa
     4621 aggggggcaa aatgttttct aacagaagat taaaacaacg aagacttgaa ataaagttat
     4681 cacagactgc aatcgctaat caattaaatg ttcatcgttc cgcttaccat aactgggaaa
     4741 acggaagaaa tatacctaat cagaaaaatc tcaccttatt atctaaaatc ctagatgtcc
     4801 cagtcactta ttttgaatct gaatacaata ttgtcaataa ctatcttcag ttatctcctg
     4861 acaatcagat aaaggcagag gaatatgtag aggggcttct actttctgaa caaatctcaa
     4921 acgtcactcc cctcttctct gtacaagttc tatcagatgt tcaactatct gctggtctgg
     4981 gagaaggatt ctttgacgaa tttgaaactg aaacagtata ctccaatgag gaacaatacg
     5041 gctacgacat tgcagcttgg attgagggag actctatgga gcctatctat aagagtggtg
     5101 aagtcgcact aattcgttca aacggattcg actatgatgg agctgtttac gcactatctt
     5161 ggaatgactc tgtctatatc aaaaagctct accgtgatga ggatggattt agaatggttt
     5221 ccctgaataa ggactatcct gagaagttca tcccttatga agatgagcca aaaattgttg
     5281 gtctagttgt gggacacttt atgcctgtcg agggagtgta gtcatgaaat taaaagatat
     5341 tttagaactt ggaatgtatg gtttcaa
//
LOCUS       DASFQS010000123         5243 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.127, whole genome shotgun sequence.
ACCESSION   DASFQS010000123 DASFQS010000000
VERSION     DASFQS010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5243
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.127"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..348
                     /locus_tag="U1041_002013"
     CDS             <1..348
                     /locus_tag="U1041_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HEM4769094.1"
                     /translation="IETSFRDLKYSIGLTHFHAKKKEGILQEIYARFINFNVCKWLTS
                     HVAIKTSKLKQIYKICFSDAVYACRKFLREELTSFQLETYIAKHLSIVRPNRIFQRKI
                     RSKAPVSFTYRVT"
     gene            644..1627
                     /locus_tag="U1041_002014"
     CDS             644..1627
                     /locus_tag="U1041_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HEM4769095.1"
                     /translation="MSKDIRVLLYYKYVPIENAKEYAAEHLAFCKSIGLKGRILIADE
                     GINGTVSGDYETTQKYMDYVHANPLFSDLWFKIDEENEQAFKKMFVRYKKEIVHLGLE
                     DNDFDSDIDPLVTTGAYLSPKEFKEALLDEDTVVLDTRNDYEYDLGHFRGAIRPDIRN
                     FRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKD
                     PEVRGELWDGKMYVFDERIAVDVNHVDPVVVGKDWFDGTPCERYVNCGNPFCNRRILT
                     SEENEHKYVRGCSAECRAHERNRYISENGLTRQEWAKRLEAIGETLTPANA"
     gene            1884..2201
                     /locus_tag="U1041_002015"
     CDS             1884..2201
                     /locus_tag="U1041_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEM4769096.1"
                     /translation="MAGRFYEAIGFAVAMFGDIKSATLPEGGNLILVQADSFAQRLPF
                     QVVASGNEVLISLNVASREEVDRIIERVEANGGQITGCPTDARGFYGASFTDLDGIIL
                     MRL"
     gene            2313..3986
                     /locus_tag="U1041_002016"
     CDS             2313..3986
                     /locus_tag="U1041_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4769097.1"
                     /translation="MKKIIEFKDFTFRYQAQQEPTLKDIQLTIYQGEKVLIIGPSGSG
                     KSTIGQCLNGIIPNIYKGEHSGSLLLDGQEAFNLSIYDKSLLVSTVLQDTDGQFIGLS
                     VAEDLAFALENDMESQVVMKQKVGDWAERLSLTDLLAHRPQDLSGGQKQRVSLGGVLI
                     DESPILLFDEPLANLDPKSGQDTIDLIDRLHKQEGTTTIIIEHRLEDVLYRQVDRVVL
                     INDGRILFNGGPDDLLRTSLLQENGIREPLYLSTLRALGYPIAQAERLSSVWEIDIEA
                     LNIASLPTLHFENGEKEALLEVKHLHFSYPNKQVLTDIQLTIHKGERLAIVGKNGAGK
                     STLAKVLCGFIQGEGEILWKGQSIKEDSVKERAERIGYVLQNPNQMISQTMIFDEVAL
                     GLRMRGVTEEEIEHRVHHILKVCGLYSFRNWPISALSYGQKKRVTIASILVLNPEIIL
                     LDEPTAGQDQRHYREMMEFLDQLNAQGHTIVMITHDMQLMLDYSDRAVVVVDGQIIED
                     ASPAEILSDDTVIERANLKETSIFHLAERVGVNPLELTTFYMQEERRGR"
     gene            3983..4816
                     /locus_tag="U1041_002017"
     CDS             3983..4816
                     /locus_tag="U1041_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM4769098.1"
                     /translation="MSQQKLIGYHPGTGLIHSLSAVSKLLFFLIVSILAMITYDTRLI
                     LFIAVFSLALFKMSGIRYKEISLVLILTIIFAAMNALMVHLFAPRYGVELYGADTPLL
                     SGLGVYSLTSQQAFYLVNLLLKYFCTVPLAIIFLMTTHPSQFASSLNQIGVSYKVAYA
                     VSLTMRYIPDIQEEFYTIRMSQEARGLELSKKGKLMDRIKGNLSLVIPLIFSSLERID
                     TISTAMELRRFGKNKKRTWYTQQPLQRIDYAVLLFILALVVVTIYLFFVNQGRFYNPW
                     R"
     gene            4976..5179
                     /locus_tag="U1041_002018"
     CDS             4976..5179
                     /locus_tag="U1041_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEM4769099.1"
                     /translation="MVQGTVKWFNAEKGFGFIAQENGPDVFAHFSEIQSNGFKSLEDG
                     QKVTFEVEQGQRGLQATNITKFG"
BASE COUNT         1549 a          926 c         1153 g         1615 t
ORIGIN      
        1 atagagacca gttttcgtga cctaaaatac agtatcggtc tgactcattt tcatgcaaaa
       61 aagaaggaag ggattctcca agaaatctac gctcgcttta tcaattttaa tgtttgtaaa
      121 tggctaacct cacacgttgc tattaaaaca tcaaagttaa aacagattta taagatttgt
      181 ttttcagacg ctgtttatgc ctgtcgaaaa tttcttagag aagaacttac ttccttccaa
      241 ttagaaacct acattgccaa acatttatcc atcgtccgac ctaatcgaat attccaaaga
      301 aagataagaa gcaaggcacc tgtaagcttc acttatagag taacataata gctgaaaaaa
      361 tgggttaaaa aacatccttt ttgtgcgccc taaatacaaa aactattccc gtttggtcat
      421 caattgctcg gacgggaata gttttaaatg cttaacttaa tgacattggt ctttttgccc
      481 agcctcattt tttacacata agcactgaat ctgcgaatac aggttctaaa ttttcagttc
      541 agatttttgt cttttgaggg gctaaacgat ataatcgtaa ggtatcattt attagaaatg
      601 acagagtttt atcatctatt gcaaagattg aaaaggagac accatgtcaa aagatattcg
      661 cgttctactc tattacaagt atgttccaat tgaaaatgcc aaagaatatg ctgctgagca
      721 tctagctttc tgtaagtcta tcggactaaa aggacgtatt ttgattgctg atgagggaat
      781 caacggtact gtttctggtg actatgaaac aactcaaaag tacatggact acgttcatgc
      841 aaacccattg ttcagtgatt tgtggtttaa gattgatgaa gaaaatgagc aagctttcaa
      901 gaaaatgttt gttcgttata aaaaagaaat tgttcacctt ggtttggaag acaatgactt
      961 tgacagcgat attgacccac ttgtaacaac aggtgcctac ttgtcaccaa aagagttcaa
     1021 agaagctctc ttggacgaag atacagttgt tttggataca cgtaatgact acgagtatga
     1081 ccttggtcac ttccgtggtg cgatccgtcc agacatccgc aacttccgtg agttgccaca
     1141 atgggtccgt gataacaaag agaaattcat ggacaagcgc gtagttgttt actgtactgg
     1201 tggtgttcgc tgtgaaaaat tctcaggctg gatggttcgt gaaggctata aagatgtcgg
     1261 ccagctccac ggtggtatcg caacctatgg taaagaccca gaagttcgtg gcgaattgtg
     1321 ggatgggaag atgtatgtct ttgacgagcg tatcgcggtc gatgttaacc atgtagaccc
     1381 agttgtcgtt ggtaaggatt ggttcgatgg cacaccatgt gagcgctatg tcaactgtgg
     1441 caatccattc tgtaaccgtc gtattttgac atcagaagag aatgagcaca agtatgttcg
     1501 tggctgttca gctgaatgcc gtgctcatga gcgtaaccgt tacatctctg aaaacggctt
     1561 gactcgtcaa gaatgggcaa aacgcttgga agcgattggg gaaactctta ctccagcaaa
     1621 tgcttagtaa taccaaaatt gcattgaaaa atcagtgcaa tttttttgtg caatcagaat
     1681 tctttatatt ttttcagtcc attctatacg aagcctatca attagaaaag agaaggggat
     1741 gaagtcattg tggatgaact tatccccttc gaaaatcaac attatccgtt gtcaccttgc
     1801 cttgatgaac ttcagttcta tcttcgcttc gtttcctagg ttacttttga tttccattga
     1861 gtattagcag tagcaaacct tgaatagctg gtcggtttta tgaagcaatc ggttttgcag
     1921 ttgcgatgtt tggagatatt aagtctgcga ctttgcctga gggtggcaac ttgattttgg
     1981 tgcaggcaga tagctttgct caacgcctac catttcaggt agtagcgagt ggcaatgaag
     2041 tcttgatttc gcttaatgtg gcgagtaggg aagaagtgga tagaattatc gagcgtgttg
     2101 aagcaaatgg cgggcaaatt acaggatgcc cgacagatgc ccgtggcttt tatggagcaa
     2161 gttttacgga ccttgatggt atcattttaa tgcgattgtg atgtaggaag ttagaattca
     2221 tctactctag aatcatggat gaacttattt gaaatgggag aaactgatga ttcttccttt
     2281 ttttcagagt caatttacgt tataatagtc ctatgaaaaa aatcattgag tttaaagatt
     2341 ttacatttag ataccaagcg caacaggaac ccactttaaa agatattcag ttaacgattt
     2401 atcagggaga gaaagttctg attattggtc catctggttc aggaaagtcg acgattggac
     2461 aatgtcttaa tggtattatt cccaatattt acaaggggga acatagcgga agtttactat
     2521 tggatggtca ggaagctttt aatctttcaa tttatgataa gtccttgctc gtatcaacgg
     2581 ttcttcaaga tacagatggt caattcattg gcttatcagt tgccgaggac ctagcttttg
     2641 ctttggaaaa cgacatggaa agccaggttg tgatgaagca aaaagtagga gattgggcag
     2701 aaagactgtc tttgaccgat ttactagcac atcgaccaca agatttatct ggaggtcaaa
     2761 agcaacgtgt cagtctgggc ggagttctta ttgatgagag tcctattttg ttgtttgatg
     2821 agccacttgc taatttagac cccaaatcgg gccaagatac gattgatttg attgaccgtc
     2881 tgcacaagca agaagggacc acaaccatta ttatcgaaca ccgtttagag gacgtactgt
     2941 atcgtcaggt ggaccgagtt gtattgatta atgacggtcg gattttgttc aatggaggac
     3001 cggatgattt attacgtacc tcattgttac aggaaaacgg catccgtgaa cccttatatc
     3061 tatcgactct tcgcgcctta ggatatccga ttgcgcaggc agaacgcctc tcttcagttt
     3121 gggaaattga tattgaggct ttgaatatag catccctacc gactctacac tttgaaaatg
     3181 gagagaaaga ggctttgtta gaagtcaagc atcttcattt ttcctatcct aacaaacaag
     3241 ttcttacaga tattcaactg acgattcata agggggaacg tctagctatt gttgggaaaa
     3301 atggtgctgg gaaatctact ttagccaagg tgctttgtgg ttttattcag ggtgagggtg
     3361 agattctctg gaaggggcag tcaatcaaag aagattctgt caaagagcga gcagaacgga
     3421 ttggttatgt tcttcagaat cccaaccaaa tgattagcca aacgatgatc tttgatgagg
     3481 ttgcccttgg tttgcgcatg cgaggggtga cagaagaaga aattgaacac cgagttcacc
     3541 atatcttgaa agtatgtggc ctgtattcgt ttcgtaattg gccgatttcg gcactttcgt
     3601 atgggcagaa aaaacgggta acgatagcat ctatcttggt tctcaatcca gaaattattt
     3661 tgctagatga gccaacagca ggacaagatc aacgacatta tcgggaaatg atggagtttt
     3721 tggatcaatt aaatgcccaa gggcacacca ttgtcatgat tacccatgac atgcaactca
     3781 tgctagatta ttcagataga gctgttgttg tggtggatgg gcagattatt gaagatgcca
     3841 gtccagcaga aattttatct gatgatacgg tgattgagcg agccaattta aaagaaacat
     3901 caatttttca cttggcggag agggtgggag ttaatccctt agaattaacg acgttttata
     3961 tgcaggaaga aaggagagga agatgagtca acaaaaacta attggttacc atccaggaac
     4021 tggcttgatt catagtttat cggctgtcag taaattactc ttttttctca tagtttccat
     4081 tcttgctatg attacttatg atacccgctt gattcttttt atcgcagtat tttctctagc
     4141 cttgttcaaa atgtcaggga ttcgttataa agaaatctct cttgttttaa ttctgacgat
     4201 catttttgct gcaatgaatg ccctgatggt tcacttgttt gcaccacggt atggagtgga
     4261 actttacgga gcagacactc ccttgctatc aggtctggga gtttattcct tgacgagtca
     4321 gcaagcattt tatctggtga atcttctctt gaagtatttt tgtacagttc ctttagcgat
     4381 tatctttctc atgaccactc atcctagcca gtttgcttcc agcttgaatc aaattggggt
     4441 atcctacaaa gttgcttacg cagtcagttt gaccatgcgt tatattccag atattcaaga
     4501 agagttttat acgattcgaa tgtctcaaga agcgcgtggt ttggaattgt ccaagaaagg
     4561 aaaattgatg gatcgtataa aagggaatct atcccttgtc attcctttga ttttcagctc
     4621 cttggagagg attgatacga tttcaacagc tatggaattg cggcgttttg gaaagaataa
     4681 aaaaagaaca tggtataccc aacagcctct acaaagaata gactacgctg tcttgctatt
     4741 tattcttgct ctagtagtcg tgacaatcta tctatttttt gttaatcagg gtcgattcta
     4801 taatccgtgg cgatgattat tgagtttatt gggcttatca accctttatc gttgacatat
     4861 aggaaatata ctgttacagt agggaatgta aataaattta gagtttaagt atcagtttca
     4921 tcttttgttt ttcctcttga taagttttac aaataaataa aaagaggtaa cacaaatggt
     4981 acaaggtaca gttaaatggt ttaatgcaga aaagggattt ggttttattg ctcaagaaaa
     5041 cggtccagat gtatttgcac acttttctga aattcagtct aatggtttca aatcgttgga
     5101 agatggtcaa aaagtgacat ttgaagtgga gcaaggccaa cgtggtcttc aagcaaccaa
     5161 tattacaaaa tttggataat aaaagaggga gcgggaaaga actcgactgg tcaaaaaaag
     5221 agttcgtcaa caagtcttta ttt
//
LOCUS       DASFQS010000124         5131 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.128, whole genome shotgun sequence.
ACCESSION   DASFQS010000124 DASFQS010000000
VERSION     DASFQS010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5131
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.128"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(12..4769)
                     /locus_tag="U1041_002019"
     CDS             complement(12..4769)
                     /locus_tag="U1041_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEM4769100.1"
                     /translation="MKKKETFSLRKYKIGTVSVLLGAVFLFAGAPSVAADEVTSLVET
                     KVEATVPDVIVSESASESPVVEELVDTSVEATPTDVTTTDNVEETLGSEALENITNTE
                     VEATQPAVETPAISEKKVEEEEKLSVADETTAITNQEEAKPQNIDSNTIITVPKVWDS
                     GYKGEGTVVAIIDSGLDVDHDVLHISDLSTAKYKSEKEIEAAKEAAGITYGEWFNDKV
                     VFGYNYVDVNTVLKEEDKRSHGMHVTSIATGNPTQPVAGQLMYGVAPEAQVMFMRVFS
                     DLKATTGAALYVKAIEDAVKLGADSINLSLGGANGSVVNMNENVTAAIEAARRAGVSV
                     VIAAGNDGTFGSGHSNPSADYPDYGLVGAPSTARDAISVASYNNTTVGSKVINIIGLE
                     NNADLNYGKSSFDNPEKSPVPFEIGKEYEYVYAGIGQASDFDSLDLTGKLALIKRGTI
                     TFSEKIANATAAGAVGVVIFNSRPGEANVSMQLDDTAIAIPSVFIPLEFGEALAANSY
                     KIAFNNETDIRPNPEAGLLSDFSSWGLSADGELKPDLAAPGGAIYAAINDNDYANMQG
                     TSMASPHVAGAAVLVKQYLQATYPTKSPQEIEALVKHLLMSTAKAHVNKETTAYTSPR
                     QQGAGIIDTAAAISTGLYLTGEDGYGSITLGNVEDTFSFTVTLHNITNEDKTLNYSTQ
                     LTTDTVQNGLITLAPRLLAEISGGKVTVKANSSTTVTINVDAASFAEELTGLMKNGYY
                     LEGFVRFTDVADGGDIVSIPYVGFRGEFQNLAVLEEPIYNLIADGKGGFYFEPVTAQP
                     DTVDISHHYTGLVTGSTELIYSTDKRSDFAIKTLGTFKNEAGYFVLELDESGKPHLAI
                     SPNGDDNQDSLAFKGVFLRNYTDLVASVYAADDTERTNPLWESQPQSGNKNFYSGDPK
                     NPKSSIIYPTEWNGTDSEGNALADGKYQYVLTYSSEVPGAAVQTMIFDVIIDRESPVI
                     TTATYDETNFTFNPRPAIEKGESGLYREQVFYLVADASGMTTIPSLLENGDVTVSDNK
                     VFVAQNDDGSFTLPLDLADISKFYYTVEDYAGNISYEKVENLISIGNEKGLVTVNILD
                     KDTNSPAPILFSYSVTDETGKIVAELPRYAGDTSVLKLPFGTYTFDLFLYDTEWSSLA
                     GETKAVVTISEENSTAEVNFYVTLKDKANLLVDIDALLPSGSTIQLVTADGQTVQLPN
                     AKYSKTDYGKFVPVGTYTILPTLPEGYEFLEELDVAVLANQSNVKKLTLINKVALKEL
                     IAELAGLEETARYYNASPELQTAYAKALEDANAVYANKHNQTQVDSAVASLVAAREQL
                     NGQATDKEKLIAEVSNYTPTQANFIYYNAENTKQIAYDTAVRSAQLVLNQENVTQAVV
                     DQALADLLAAKAGLDGQKTDISALRSAVSVSSVLKVTDAKYLNASENVKQAYDQAVEA
                     AKAILADESASQASVDQALAVLTSAQAELDGVATSTNDAKEPANTATDKKDEGTVTPP
                     PIDSEKVDVQAPPVKDTGNSGHVPIGQKPTPQPTLPRPVTLHASLSSPNQEKQVTQLP
                     NTGENDTRYYIVLGVIIGLWTLLVSKRRHKEEV"
BASE COUNT         1391 a         1092 c         1016 g         1632 t
ORIGIN      
        1 actatatttt cttagacttc ttctttgtga cgtcgtttgc ttaccaacag agtccatagc
       61 ccaataatga caccaagaac aatatagtat ctcgtatcat tttctccagt atttggtagt
      121 tgagtcacct gtttttcttg attagggcta gatagactag catgcaaagt gactggacga
      181 ggtaaagttg gttgaggggt tggcttctga cctatcggta catgccctga attcccagta
      241 tcttttacag gaggtgcctg tacatcaact ttttctgagt ctataggtgg aggcgttaca
      301 gtgccttcat cttttttgtc agtggcagta tttgctggct ctttggcatc atttgttgaa
      361 gtagcaacac catccagttc tgcctgagcg cttgtcagaa cggctagagc ttgatcgaca
      421 cttgcttggc ttgcagattc atcagctaga atcgctttcg ctgcttcaac tgcctgatca
      481 taagcttgtt tcacgttttc agatgcattg agatacttag catctgtcac ttttaatacg
      541 gaagaaacgg atactgcgct acgaagggct gaaatatcag tcttttgacc atctaagccg
      601 gctttcgctg ctaacaagtc tgccaacgct tggtcgacaa ctgcctgtgt tacattctct
      661 tggttcaata caagttgtgc tgaacgaaca gctgtatcat aggcaatttg tttggtattt
      721 tcagcattgt aataaataaa gtttgcctga gtcggtgtgt agtttgatac ttcagcaatt
      781 agtttttcct tatcggtagc ctgaccgttt agctgttctc tcgccgccac aagactggca
      841 accgctgaat ctacttgtgt ctgattgtgt ttgttggcat atactgcatt ggcatcttct
      901 aatgctttag cataggccgt ttgaagttct ggactagcat tgtaataacg cgctgtttct
      961 tcaagtccag caagttcagc aatcagttct ttcaaagcaa ctttattaat caaggttaat
     1021 ttcttaacat ttgactggtt tgcaagtact gctacgtcta attcttccaa aaattcatag
     1081 ccttctggga gggttggaag gatagtgtag gtaccaactg gtacaaattt accataatcg
     1141 gtcttagaat atttagcatt tggtagctga acagtctggc catcagcagt taccagttgg
     1201 atggttgaac cagaaggtag taatgcatca atatctacca gcaagttggc cttatctttc
     1261 aaagtcacat agaaattcac ctcggcagtg ctattttctt ccgaaatcgt cacgactgct
     1321 tttgtttcac ctgctaggct tgaccattct gtatcatata agaataaatc aaaggtgtaa
     1381 gtaccaaatg gtagcttaag aacgctagta tcgccggcat atcgtggtaa ttctgcaaca
     1441 atcttgcctg tttcatcggt gactgagtaa gagaaaagta ttggtgcagg actatttgta
     1501 tctttatcaa gaatattgac agttaccaac cctttttcat tgccaatact gatcagattc
     1561 tctacttttt catagctgat gttaccagca taatcctcta ctgtgtagta gaattttgaa
     1621 atatctgcaa ggtcaagagg caatgtaaag gagccatcgt cgttttgtgc cacaaatacc
     1681 ttgttatcag aaacagttac atcaccattt tctaataagg aaggaatagt tgtcataccg
     1741 cttgcatctg ctacaagata gaatacttgc tcgcgatata gaccggattc tcctttttca
     1801 atggctggac gagggttaaa tgtaaagttt gtttcatcat aggtagctgt ggtgataact
     1861 ggtgattctc tatcgatgat aacatcgaaa atcatagttt gtactgctgc acctggaact
     1921 tcagatgagt aggtcaaaac gtattgatac ttaccatctg ctaaagcatt tccctcgctg
     1981 tctgtcccat tccattcagt agggtaaata atgcttgatt ttggattttt aggatcacca
     2041 ctatagaagt tcttattgcc tgactgtggt tgactttccc aaagtggatt tgttcgttcg
     2101 gtatcatctg cagcatagac gcttgcgact aaatccgtat aatttctcaa gaagacacct
     2161 ttgaaagcga gcgaatcttg gttgtcatcc ccatttggcg agatagctaa atgaggctta
     2221 ccggactcat caagctctaa aacaaagtat cctgcttcat ttttaaatgt accaagtgtc
     2281 ttgatcgcaa agtcagatcg tttgtctgta gaatagatta actccgtact tcctgtaaca
     2341 agacctgtgt agtgatggct gatatcaaca gtatctggtt gtgctgtaac aggttcaaag
     2401 tagaagcccc ccttaccatc ggcaataaga ttgtaaatcg gctcttctag aacggctaga
     2461 ttttggaatt ccccacggaa accaacgtat ggaatgctga caatatcacc gccatcggct
     2521 acatctgtaa atcgaacaaa accttcaaga tagtaaccgt ttttcattaa acctgtcaat
     2581 tcttctgcaa agcttgctgc atcgacatta attgtaacag ttgtacttga attggctttc
     2641 acagtcacct taccgccaga aatctctgct aatagacgcg gagccaaggt gatcaatccg
     2701 ttttggacag tatccgttgt taattgcgtt gagtagttta aagtcttatc ttcgtttgta
     2761 atgttatgaa gtgtgaccgt aaagctgaat gtatcctcaa catttcccaa ggtaatgctg
     2821 ccataaccgt cttcgccagt caaatataaa cctgtagaaa tagctgccgc agtatcgatg
     2881 atacctgcac cttgttggcg aggggaagtg taggctgttg tttctttgtt cacatgtgct
     2941 ttagcagtag acataagcaa gtgttttact aaggcttcga tttcttgagg ggacttagta
     3001 gggtaagttg cctgtaaata ttgttttact agtacagctg ctcctgctac gtgtggtgaa
     3061 gccatacttg ttccctgcat gttggcatag tcattatcat tgatagctgc ataaatagca
     3121 ccacctggag cagctaagtc tggttttagc tcgccatccg ctgatagacc ccaacttgaa
     3181 aaatctgaaa gaagacctgc ttctgggtta gggcgaatat ctgtttcgtt attgaacgca
     3241 atcttatatg agttagctgc caaagcttca ccaaattcca atggaatgaa gacagatgga
     3301 attgcaatag ctgtatcatc aagttgcatg cttacattgg cttcacctgg acggctattg
     3361 aaaatgacca cccctactgc acctgcagct gttgcattgg ctattttttc tgagaaggta
     3421 atcgttccac gtttgatgag tgcaagtttt ccagtcaaat ctagactatc aaaatccgaa
     3481 gcttgaccga ttcccgcata gacatattca tattctttcc cgatttcaaa tggtacggga
     3541 cttttctctg gattatcaaa cgaactctta ccgtaattca agtcagcatt gttttctaag
     3601 ccaatgatat tgattacttt actaccaacc gttgtgttat tgtaagaagc gacagaaatt
     3661 gcatcgcgag ctgttgaagg tgcaccgacc aagccataat ctggataatc ggctgacgga
     3721 ttagaatgac ctgaaccaaa tgttccatca ttaccagcag caataacaac agaaacacct
     3781 gcacgacgag cagcctcgat tgctgcagtc acattttcat tcatgttaac aacagagccg
     3841 ttagctcctc ctaggctgag gttgatgcta tctgcaccta attttacagc atcttcaatc
     3901 gcctttacat acaatgctgc gcctgttgta gctttgaggt ctgagaatac acgcatgaac
     3961 atgacttgcg cttcaggagc tacaccatac attaattgtc cagcgactgg ttgtgtcgga
     4021 tttcctgtgg caatactcgt tacgtgcata ccgtgtgagc gtttgtcttc ttctttcaag
     4081 acagtattca catcaacata gttataacca aatacaacct tatcgttaaa ccattcgccg
     4141 taggtaattc ctgctgcttc tttagctgct tctatctctt tttctgattt atattttgcg
     4201 gttgagagat ctgaaatatg caatacatcg tggtcaacgt caagaccgga atctatgatt
     4261 gcaactactg ttccttcgcc cttgtaacca ctatcccaaa ctttaggtac tgtaatgatt
     4321 gtattactat caatgttttg tggtttcgct tcttcctgat tagtaatagc agtagtctca
     4381 tctgctacgg aaagcttctc ctcttcttct acttttttct ctgaaatagc tggagtttct
     4441 acagctggtt gagtcgcttc tacttctgta tttgtgatgt tttcaagagc ttctgagcca
     4501 agtgtttcct ctacattatc tgtagtggtt acatcagttg gggtagcctc cacagaagtg
     4561 tcaactaact cctcgacaac gggactttct gaggctgatt cgctgacgat tacgtcagga
     4621 acagttgctt ccaccttagt ctctacaagg cttgttactt catctgcagc taccgatggt
     4681 gcacctgcaa acaaaaaaac tgcacccaaa agaacagaca cagttccaat tttatacttc
     4741 cgaagtgaga aagtttcttt ctttttcata acttttcctc ctagtttttc tccttcatta
     4801 ttggcaaaac caataaatat attaaaacac aaaattatca gcattgcaag tatattctga
     4861 aaattcagtt atttattcaa actataacta gctatcaata atatctataa ccatagatac
     4921 agataataca cactaaaaag ggagtgagca agacatccat gatggctccg tccttaccca
     4981 cagaataatg agaatgaaca taaagccctc actaagatta tatacctagt gagggccttg
     5041 cggttggtgc attattgatg ttgattatgg tgacaaaact gctccagcct gctgataaga
     5101 accacaatat acactcaaga atatgactaa t
//
LOCUS       DASFQS010000125         4998 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.129, whole genome shotgun sequence.
ACCESSION   DASFQS010000125 DASFQS010000000
VERSION     DASFQS010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4998
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.129"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..647
                     /locus_tag="U1041_002020"
     CDS             <1..647
                     /locus_tag="U1041_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4769101.1"
                     /translation="PKMEEPKTDKVESDKQMPEAKQPEMDQPKAEDMPKEEMPKAEQP
                     KTEDSAPKTAVPEVAPKTAEKPKLDFTTKERKVAEALPIKEEIRYDASLALGKSYLLQ
                     EGKAGKKVSVYQDVIVDGKVVATNLLSETVVEGQNRILVKGSLEMKKEEVKTTPSVQS
                     NPTMSQKGAPSANKATLPATGEQRNNLTLVGLGLAGISLAVVATAINKKSKDQI"
     gene            complement(874..3141)
                     /locus_tag="U1041_002021"
     CDS             complement(874..3141)
                     /locus_tag="U1041_002021"
                     /EC_number="3.4.14.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidyl-peptidase"
                     /protein_id="HEM4769102.1"
                     /translation="MRFNQFSFIKKETSIYLQELDALGFQLIPNASSKTNLETFVRKC
                     HFLTANTDFALSNMIADWDTDLLTFFQSDHELTDQIFYQVAFQLLGFVPGVDYTDVEE
                     FRKASQFPIVYEDIIDNLYQLLATRTKSGNTLIDQLVSDDLIPEDNRYHFFNGKSLAT
                     FSTKNLIREVVYVETPVDTAGTGQTDIVKLSILRPHFDGKIPAVITNSPYHQGVNDVA
                     SDKALHKMEGELAEKPAGTIEVNQTSITKLDLDQRELPISPATEKLGHITSYSLNDYF
                     LARGFTSLHVSGVGTLGSTGYMTSGDYQQVEGYKAVIDWLNGRTKAYTDHTRSIEVKA
                     DWANGKVATTGLSYLGTMSNALATTGVDGLEVVIAEAGISSWYDYYRENGLVTSPGGY
                     PGEDLDSLTALTYSKSLQAGDFLRNKAAYEKGLAAEHAALDRTSGDYNQYWHDRNYLL
                     HADKVKCEVVFTHGSQDWNVKPIHVWNMFHALPSHIKKHLFFHNGAHVYMNNWQSIDF
                     RESMNALLSQKLLGYENNYQLPTVIWQDNSGEQTWTTLDTFGGENETVLPLGTGNQTI
                     ANQYAQEDFDRYGKSYPAFHQDLYAGKANQVSMELPITEDILINGQVMLKLRVASSVA
                     KGLLSAQLLDKGNKKRLAPIPAPKARLSLDNGRYHAQENLLELPYVDMPQRLVTKGFM
                     NLQNRTDLMTVEEVVPDQWMDLTWKLQPTIYQLKKDDVLELILYTTDFECTVRDNSQW
                     QIHLDLSQSQLILPH"
     gene            3323..4057
                     /locus_tag="U1041_002022"
     CDS             3323..4057
                     /locus_tag="U1041_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEM4769103.1"
                     /translation="MLRKNDAIVPVLRINNRAINQGFLEKNLGMKTKLEDGPFADFGD
                     RTSPETKLVLTESPGNRTRAVEGLKKLNKIVIKVDSASEIEALLAQGSQYSKLYQGKN
                     GYGFEALSPEGDTFLLHAEASVDDLKAILPPVPFKVQDDFSGLTAFTVESVWINTPQA
                     SISQDYYEAILPQQAFLRFVGAEGKDLLTPAEQVWDLEGLRFPVEQDFDWANLESQLE
                     GPFFKDKKETFIQTVDPSGIELWFEK"
     gene            4054..>4998
                     /locus_tag="U1041_002023"
     CDS             4054..>4998
                     /locus_tag="U1041_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HEM4769104.1"
                     /translation="MRQVILDKISEQIGQGVYPGASLALFSKGQWQEYYLGTQDGQLP
                     VEAGLTYDLASVSKVVGVGTLATFLVNSGALELDRTLQSYYPAFADSQVTLRQLLTHT
                     SGIDPFIPNRDSLDADQLKEAILKITVTDKKAFLYTDINFLLLGFLLEELGGASLDQL
                     ISRDVLEPFGMSQTSFGPVSQAVPTVRGVKAGVVHDPKARVLGLHAGSAGLFSTVKDL
                     EIFLERYLTADFAANLTQDYGFDDKRKRSLAWDKKGDWLSHTGYTGTFIMYNRPLQKA
                     AIFLSNRTFDKDERAQWKLDRNQVMVLIRQVLEEEEAVD"
BASE COUNT         1369 a         1048 c         1228 g         1353 t
ORIGIN      
        1 aaccgaaaat ggaagaaccg aaaactgata aagtagagtc tgacaaacag atgccagagg
       61 ctaagcaacc agaaatggac caaccgaaag cagaagacat gccgaaggag gaaatgccaa
      121 aggctgagca accaaaaacg gaagactctg cacctaagac agcagttcca gaagtcgcac
      181 caaaaacagc ggaaaaacca aagctagact tcacaacaaa agaacgcaag gtagcagaag
      241 ctctccctat caaagaagaa atcagatatg atgcaagcct agcacttggc aaatcatacc
      301 ttcttcaaga aggaaaagca ggtaaaaaag tatctgttta tcaagatgtc atagttgatg
      361 gtaaagttgt cgcaaccaac ctattatcag aaactgttgt tgaaggccaa aatcgtatcc
      421 ttgtaaaagg tagcttggaa atgaagaaag aagaagtaaa aacaactcct tcagtacaat
      481 caaatccaac aatgagtcag aagggtgcac cttctgcaaa caaagcaacc ctacctgcaa
      541 caggtgaaca acgcaataac ctaaccttag taggccttgg tttagctgga attagcttgg
      601 cagtagtcgc tacagctata aataaaaaat ctaaagatca aatctaaacc attatgaaat
      661 aataaagagg caggtcggaa acgcccagcc tctttttaga actgaaaatc aatattatgc
      721 tcttcgaaca tcaaaatcag acgttgttga cttgatttta tggtagcagg ggtatatctg
      781 ctcttggaga aatgaacttc gttcacttta tctccaacct ccaaaggctt cccaaacctt
      841 tgaaactagt ctgattttga ttttcattga gtattagtgc ggtaaaatta actgtgattg
      901 acttaaatca aggtggattt gccattgaga attatcccga acagtacact caaagtcggt
      961 tgtatagaga atcagctcta agacgtcatc ttttttcagc tgataaatgg tcggctgcag
     1021 cttccaggtc agatccatcc actggtctgg caccacttcc tcaacagtca ttaggtcggt
     1081 gcggttctgc aggttcataa agcccttggt taccaagcgt tgtggcatat ctacataagg
     1141 caactccagc agattttctt gggcatggta acgaccgttg tctagactca atcttgcttt
     1201 aggcgcaggg attggggcta ggcgtttttt atttcctttg tctaatagct gagcagataa
     1261 gagaccttta gctacactag aagcgacacg gagtttcagc atgacttgtc cgttaatcag
     1321 gatatcctcc gttataggca gttccatgct gacttggttg gccttgcctg catagaggtc
     1381 ttggtggaag gctggatatg atttgccgta gcggtcaaaa tcttcttggg catactgatt
     1441 ggcaatggtc tggtttccag tacctagtgg caagacagtc tcgttttcac cgccaaaggt
     1501 gtccaaggtc gtccaagttt gctcaccgct gttgtcctgc cagataaccg ttggcagttg
     1561 gtagttgttc tcgtagccca gcagtttctg actgagcagg gcgttcatag actcgcggaa
     1621 gtcgatagac tgccagttgt tcatataaac gtgggcaccg ttgtggaaga agaggtgctt
     1681 tttgatgtga cttggcaggg catggaacat attccagacg tggattggct tgacattcca
     1741 gtcctgtgag ccgtgggtaa agaccacctc acacttgacc ttatctgcgt ggagcagata
     1801 attgcggtca tgccagtatt gattgtagtc accgctggtg cggtccaagg cagcatgttc
     1861 tgccgccagt cctttttcgt aggctgcttt attgcggagg aagtcgcctg cttgcaggct
     1921 tttcgagtag gtcagggcgg tcaagctgtc caaatcttcg cctggatagc cgccagggct
     1981 ggtcaccagc ccgttttcac ggtagtagtc ataccaagag gaaatccccg cttctgcgat
     2041 gacgacttcc aatccgtcca cgccagttgt tgccaaggca ttggacatgg tgccgagata
     2101 agaaagtccc gtcgtcgcta ccttaccatt ggcccaatca gccttgacct caatcgagcg
     2161 ggtgtggtct gtgtaggcct tggtacgacc gttcagccag tcaatcactg ctttatagcc
     2221 ctccacctgc tggtagtcgc cagatgtcat gtagccagtc gagcccagcg tgccgacacc
     2281 agacacatgg aggctggtaa agccacgagc taggaaataa tcattgaggg agtatgaagt
     2341 aatgtggccc agtttttcgg tggcagggct gataggtagc tctcgctggt ccaagtctag
     2401 cttggtgatg ctggtctggt tgacctcaat ggtaccagct ggtttttccg ccaactcccc
     2461 ttccatcttg tgcagggcct tgtcactagc tacatcgtta acaccctgat gatagggact
     2521 gtttgtaatc accgcaggta ttttcccgtc aaagtgcgga cggagaatgg atagcttaac
     2581 aatatctgtc tgcccagtcc cagccgtatc gacaggtgtt tcgacataga ccacctcacg
     2641 aatgaggttt tttgttgaaa aagtcgccaa agatttgccg ttgaagaagt ggtagcgatt
     2701 gtcttctggg attaggtcat cgctgaccag ctggtcaatc aaggtgtttc cagacttggt
     2761 gcgggtagcg agcagctggt agagattgtc gatgatatcc tcatagacaa taggaaattg
     2821 gctagccttg cggaattctt ccacatctgt gtagtccaca ccaggcacaa agcccagcaa
     2881 ctgaaaggcg acttgataga aaatctggtc agtcagctca tggtcagact ggaagaaggt
     2941 cagcaggtct gtgtcccaat ccgcaatcat gttggacagg gcaaagtcgg tgttggctgt
     3001 caggaaatgg cactttctga caaaggtttc taaatttgtc ttactacttg cattaggaat
     3061 cagttgaaat cctagagcat caagctcttg caagtagatg gaggtctctt tttttataaa
     3121 agaaaattga ttaaagcgca taaattctcc tcttttttag gataatagtc tataatagct
     3181 attatatctg ataagctagt gtttgtctaa aaattatccg tatatataaa aatattaatg
     3241 tataaaacga cgatacaatt agttgtaaaa tgacgaaatt tttaatacaa tattgtagaa
     3301 tgactgagga gtgaaatgta tcgtgttgag aaaaaatgat gctatagtcc ctgttttacg
     3361 tattaataat agggctatta accaaggatt tttagaaaaa aatctaggaa tgaagaccaa
     3421 gctagaagat ggtccttttg ctgattttgg agatagaaca agtccagaaa cgaagcttgt
     3481 tttgacagaa tctcctggta atcgcacccg tgctgtcgaa gggcttaaaa aactgaataa
     3541 aattgtgata aaagtagaca gtgcctctga aattgaagct ttactggcgc aagggtcaca
     3601 gtatagtaag ctctaccaag gaaaaaatgg ctatggtttt gaagctcttt cgccagaagg
     3661 agacaccttt cttttacatg cagaagcatc tgttgatgac ctaaaagcaa tccttccacc
     3721 tgttccattt aaggtgcagg atgacttttc tggtctgacc gcttttacag tagagtctgt
     3781 ctggattaat accccacaag ctagtattag ccaagactat tatgaggcaa tcctacctca
     3841 acaagccttt ttgcgttttg ttggagcaga aggtaaggat ttattaactc ccgcagaaca
     3901 agtttgggat ttagaaggct tgcgttttcc cgtcgagcag gattttgact gggcaaactt
     3961 ggaaagccag ttggaaggtc ctttctttaa agacaaaaaa gaaaccttta tccagacggt
     4021 tgacccgagt ggtattgaat tgtggtttga aaaatgagac aagtaatttt agacaagatt
     4081 tcagagcaga ttgggcaagg agtctatcct ggtgccagtc tggctctttt ttctaagggt
     4141 cagtggcagg agtattattt ggggacccag gatggtcagc taccagttga ggcgggtttg
     4201 acctatgatt tggcgtctgt ttccaaggtg gttggtgtgg ggactcttgc gacttttttg
     4261 gttaatagcg gagctttgga gctcgatagg accttgcagt cttattatcc tgcttttgcg
     4321 gatagtcagg tcacccttcg gcaattattg acccatacta gtggtatcga tcccttcatt
     4381 cccaatcggg atagtctgga tgccgaccag ctcaaggaag cgattttgaa gattactgtg
     4441 acggacaaga aagctttcct ctatacagac atcaattttc tcttgctagg ctttttgttg
     4501 gaggaactgg gtggagcaag tctagaccag ctgattagtc gagacgttct agagcccttt
     4561 ggcatgtctc aaacctcctt tggaccagtc agtcaggcgg taccgacggt gcgtggcgtc
     4621 aaagcgggtg tggtacatga ccctaaggcg cgtgtcctag gcctccacgc gggaagtgca
     4681 ggtctctttt cgaccgtcaa agatttggaa atctttttgg agcgctatct gacggctgac
     4741 tttgcggcga atttaacgca ggattacggt tttgacgata agcgcaagcg gtcgctagct
     4801 tgggataaga agggggactg gttgtcgcac acaggctata cggggacctt tatcatgtat
     4861 aaccgtccct tgcagaaagc tgcgattttt ctctcgaatc gtacttttga caaggatgag
     4921 cgggcccagt ggaagttgga tagaaaccaa gtcatggtct tgattcgtca ggtcttggag
     4981 gaagaagagg ctgttgac
//
LOCUS       DASFQS010000126         4961 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.130, whole genome shotgun sequence.
ACCESSION   DASFQS010000126 DASFQS010000000
VERSION     DASFQS010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4961
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.130"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..1347
                     /locus_tag="U1041_002024"
     rRNA            <1..1347
                     /locus_tag="U1041_002024"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            1543..1615
                     /locus_tag="U1041_002025"
     tRNA            1543..1615
                     /locus_tag="U1041_002025"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1576..1578,aa:Ala,seq:tgc)
     gene            1935..4838
                     /locus_tag="U1041_002026"
     rRNA            1935..4838
                     /locus_tag="U1041_002026"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         1389 a         1018 c         1429 g         1125 t
ORIGIN      
        1 tacttaaaag gagcaattgc ttcactatga gatggacctg cgttgtatta gctagttggt
       61 gaggtaacgg ctcaccaagg catcgataca tagccgacct gagagggtga tcggccacac
      121 tgggactgag acacggccca gactcctacg ggaggcagca gtagggaatc ttcggcaatg
      181 ggggcaaccc tgaccgagca acgccgcgtg agtgaagaag gttttcggat cgtaaagctc
      241 tgttgtaaga gaagaactgt gagaagagtg gaaagtttct cacttgacgg tatcttacca
      301 gaaagggacg gctaactacg tgccagcagc cgcggtaata cgtaggtccc gagcgttgtc
      361 cggatttatt gggcgtaaag cgagcgcagg cggtttgata agtctgaagt aaaaggctgt
      421 ggcttaacca tagtacgctt tggaaactgt caaacttgag tgcagaaggg gagagtggaa
      481 ttccatgtgt agcggtgaaa tgcgtagata tatggaggaa caccggtggc gaaagcggct
      541 ctctggtctg taactgacgc tgaggctcga aagcgtgggg agcgaacagg attagatacc
      601 ctggtagtcc acgccgtaaa cgatgagtgc taggtgttgg gtcctttccg ggactcagtg
      661 ccgcagctaa cgcattaagc actccgcctg gggagtacga ccgcaaggtt gaaactcaaa
      721 ggaattgacg ggggcccgca caagcggtgg agcatgtggt ttaattcgaa gcaacgcgaa
      781 gaaccttacc aggtcttgac atcccgatga ccgccctaga gatagggttt ctcttcggag
      841 caacggtgac aggtggtgca tggttgtcgt cagctcgtgt cgtgagatgt tgggttaagt
      901 cccgcaacga gcgcaacccc tattgttagt tgccatcatt cagttgggca ctctagcgag
      961 actgccggta ataaaccgga ggaaggtggg gatgacgtca aatcatcatg ccccttatga
     1021 cctgggctac acacgtgcta caatggctgg tacaacgagt cgcaagtcgg tgacggcaag
     1081 ctaatctctt aaagccagtc tcagttcgga ttgtaggctg caactcgcct acatgaagtc
     1141 ggaatcgcta gtaatcgcgg atcagcacgc cgcggtgaat acgttcccgg gccttgtaca
     1201 caccgcccgt cacaccacga gagtttgtaa cacccgaagt cggtgaggta accttttagg
     1261 agccagccgc ctaaggtggg atagatgatt ggggtgaagt cgtaacaagg tagccgtatc
     1321 ggaaggtgcg gctggatcac ctcctttcta aggaaatgga aacctgtacg tcagtcttct
     1381 ttaattttga gaggtcttgt ggggccttag ctcagctaag cgaaaccttt aggttgaagc
     1441 tttgtcgaaa ctagcggagc tagtgcacga caggggccag cgtctcaaaa atgatattat
     1501 atcgaaacaa ttaaatacgt taacaggtac ataaaaatgt acggggcctt agctcagctg
     1561 ggagagcgcc tgctttgcac gcaggaggtc agcggttcga tcccgctagg ctccataggg
     1621 taaggaaatg agttttctta tcctaaaacc aaaagatatt gttcaagtaa ttgaacacga
     1681 cctcattttc taggaaaata gataaacttc ctagtgtctg acgacactac gtcagtttcc
     1741 taattttcta caaaaatgcc cgacgagtcg ggacggtctt agtatcttat acttgtccat
     1801 tgaaaattga atatctatca aacattcctg atgtatctga aaggatacat taagaaatag
     1861 taacaagaaa ataaaccgaa aacgctgtga atatttaatg agttttctaa tttttgaaaa
     1921 aattaggtta ataaggttaa gttaataagg gcgcacggtg gatgccttgg cactagaagc
     1981 cgatgaagga cgtgactaac gacgaaatgc cttggggagc tgtaagtaag caatgatcca
     2041 gggatgtccg aatgggggaa cccggcaggt aatgcctgtc actcactact gttaaggtag
     2101 tgaagaggaa gacgcagtga actgaaacat ctaagtagct gcaggaagag aaagcaaaag
     2161 cgattgcctt agtagcggcg agcgaaacgg caggagggca aaccgaggag tttactcctc
     2221 ggggttgtag gactgcaatg tggacttaaa gagtatagaa gaactacctg ggaaggtagg
     2281 ccaaagagag taacagcctc gtatttgaaa tattctttat acctagcagt atcctgagta
     2341 cggcgagaca cgcgaaatct cgtcggaatc cgggaggacc atctcccaac cctaaatact
     2401 ctctagtgac cgatagtgaa ccagtaccgt gagggaaagg tgaaaagtac cccggaaggg
     2461 gagtgaaata gaacctgaaa ccgtgtgcct acaacaagtt caagcccgtt aatgggtgag
     2521 agcgtgcctt ttgtagaatg aaccggcgag ttacgatatg atgcgaggtt aagttgaaga
     2581 gacggagccg tagggaaacc gagtcttaat agggcggatt agtattatgt cgtagacccg
     2641 aaaccatgtg acctacccat gagcaggttg aaggtgcggt aagacgcact ggaggaccga
     2701 accagggcac gttgaaaagt gcttggatga cttgtgggta gcggagaaat tccaaacgaa
     2761 cttggagata gctggttctc tccgaaatag ctttagggct agcgtcgaca tttgagaatc
     2821 ttggaggtag agcactgttt ggatgagggg gccatctcgg tttactgatt tcagataaac
     2881 tccgaatgcc aatgatttat ggtcggcagt cagactgcga gtgctaagat ccgtagtcga
     2941 aagggaaaca gcccagacca ccagctaagg tcccaaaata attgttaagt ggaaaaggat
     3001 gtggggttgc acagacaact aggatgttag cttagaagca gctattcatt caaagagtgc
     3061 gtaatagctc actagtcgag tgaccctgcg ccgaaaatgt accggggcta aaacaattta
     3121 ccgaagctgt ggataacact taggtgttat ggtaggagag cgttctatgt gtgaagaagg
     3181 tataccgtga ggagtgctgg aacgcataga agtgagaatg ccggtatgag tagcgaaaga
     3241 tgggtgagaa tcccatccac cgtaagacta aggtttccag gggaaggctc gtccgccctg
     3301 ggttagtcgg gacctaagga gagaccgaag ggtgtatccg atggacaaca ggttgatatt
     3361 cctgtactag agtatgaagt gatggaggga cgcagtaggc taactaaagc gggcgattgg
     3421 aagagcccgt ctaagcagtg aggtgtgata tgagtcaaat gcttgtatct gtaacattga
     3481 gctgtgatgg ggagcgaaga taagtagcga agttagtgac gtcacactgc cgagaaaagc
     3541 ttctagcgat gtatcatact ctacccgtac cgcaaaccga cacaggtagt cgaggcgagt
     3601 agcctcaggt gagcgagaga actctcgtta aggaactcgg caaaatgacc ccgtaacttc
     3661 gggagaaggg gtgctgactt aaagtcagcc gcagtgaata ggcccaagca actgtttatc
     3721 aaaaacacag ctctctgcta aatcgtaaga tgatgtatag ggggtgacgc ctgcccggtg
     3781 ctggaaggtt aagaggaggg tttagcgcaa gcgaagatct gaattgaagc cccagtaaac
     3841 ggcggccgta actataacgg tcctaaggta gcgaaattcc ttgtcgggta agttccgacc
     3901 cgcacgaaag gcgtaatgat ttgggcactg tctcaacgag agactcggtg aaattttagt
     3961 acctgtgaag atgcaggtta cccgcgacag gacggaaaga ccccatggag ctttactgca
     4021 gtttgatatt gagtatctgt accacatgta caggataggt aggagcctat gaagtcggga
     4081 cgccagtttc gactgaggcg ctgttgggat actacccttg tgttatggct actctaaccc
     4141 ggataggtta tccctatcgg agacagtgtc tgacgggcag tttgactggg gcggtcgcct
     4201 cctaaaaggt aacggaggcg cccaaaggtt ccctcagaat ggttggaaat cattcgcaga
     4261 gtgtaaaggt ataagggagc ttgactgcga gagctacaac tcgagcaggg acgaaagtcg
     4321 ggcttagtga tccggtggtt ccgtatggaa gggccatcgc tcaacggata aaagctaccc
     4381 tggggataac aggcttatct cccccaagag ttcacatcga cggggaggtt tggcacctcg
     4441 atgtcggctc gtcgcatcct ggggctgtag tcggtcccaa gggttgggct gttcgcccat
     4501 taaagcggca cgcgagctgg gttcagaacg tcgtgagaca gttcggtccc tatccgtcgc
     4561 gggcgtagga aatttgagag gatctgctcc tagtacgaga ggaccagagt ggacttaccg
     4621 ctggtgtacc agttgtcttg ccaaaggcat cgctgggtag ctatgtaggg acgggataaa
     4681 cgctgaaagc atctaagtgt gaaacccacc tcaagatgag atttcccata actttatgtt
     4741 agtaagagcc ctgagagatg atcaggtaga taggttggaa gtggaagtgt ggcgacacat
     4801 gtagcggacc aatactaatc gctcgaggac ttatccaaga ataagtaatg agaacgttaa
     4861 gaaaagcgta tgattttagg aaatcaacgc ggaagtcggt tagacttcaa ggcgattttt
     4921 ctaaatcact agctttttag ttcgaataca attacttatt a
//
LOCUS       DASFQS010000127         4949 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.131, whole genome shotgun sequence.
ACCESSION   DASFQS010000127 DASFQS010000000
VERSION     DASFQS010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4949
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.131"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(54..599)
                     /locus_tag="U1041_002027"
     CDS             complement(54..599)
                     /locus_tag="U1041_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4769105.1"
                     /translation="MANVLFLVGSLRDGSFNHQMAKKAEAFLADKAQVSYIDLAKIPL
                     FNQDIETPILSEIAELRAQVDAADAIWIFSPVYNYAIPGIVKNALDWLSRSLDLSNPK
                     GPSILQDKITTVSAVANSGHDHLFKDFQHLLPFIRTQIAGEFTGSTINPEAWGTGVLE
                     LSDETLAKLEQQAADLLAAIQ"
     gene            complement(662..1111)
                     /locus_tag="U1041_002028"
     CDS             complement(662..1111)
                     /locus_tag="U1041_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM4769106.1"
                     /translation="MRTVEQSLNENKHALHSLVVFRRAANTITKSELETIKKYGLTVC
                     QFGVMEALYNKGNLRIQDLIDKLLSTSGNMTVVIKNMIRDGYIYKTIDINDRRASLIA
                     LTPLGRETIEKILPEHYDHVGEIFSVLSSEEQDQLAEILKKFKNQQT"
     gene            1325..1822
                     /locus_tag="U1041_002029"
     CDS             1325..1822
                     /locus_tag="U1041_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5590 domain-containing protein"
                     /protein_id="HEM4769107.1"
                     /translation="MEKKIFQLLEVLATKKGQLIAGSFILLSVMTFSIFVIWDLAAKP
                     FSDVQNHAISVARDYTDIEVVDDVSIYNGTETYFTLQGKTSQGEMIAVIIPEETNTVY
                     VYPMANGISKEEAQAVATENGASTADRVILGFRDDKPIWEVKSGTAYYLVEFETGNFI
                     KREGL"
     gene            1819..3000
                     /locus_tag="U1041_002030"
     CDS             1819..3000
                     /locus_tag="U1041_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4769108.1"
                     /translation="MSKLSRRVLEMEESVTLAAGARAKALKAEGRDILELTLGEPDFV
                     TPKNIQEAAIKSIEDGKASFYTVASGLPELKDAVDTYFENFYGYSIERNQVVLATGAK
                     FVLYAFFAAVINPGDEVIIPTPYWVSYADQIKMNDGVPVFVTAREEHNFKVTVDQLEA
                     ARTDKTKVLLLNSPSNPTGMIYTREELEAIGNWAVEHDILILADDIYGRLVYNGNTFT
                     PISSISESIRQQTIVVNGVAKAYAMTGWRVGFAVGNPEIIAAMSKIVGQTTSNLTTAA
                     QYAAIEAFTGPQDTVETMRQAFEERLNTIYPLLAEVPGFEVIKPEGAFYLFPNVKKAM
                     EMKGYTDVTEFTTAILEEVGVALVTGAGFGAPENIRLSYATDMDTLKEAVARLHTFMK
                     K"
     gene            3015..4361
                     /gene="asnS"
                     /locus_tag="U1041_002031"
     CDS             3015..4361
                     /gene="asnS"
                     /locus_tag="U1041_002031"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEM4769109.1"
                     /translation="MSRKLITINQVKDYVGQEVTIGAWVANKSGKGKLAFLQLRDGTA
                     FFQAVAFKPNFIEKFGEEAGTEKFDVAKRLSQETSVYVTGIVKEDERSKFGYELDVTD
                     LEVIGESQDYPITPKEHGTDFLMDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGF
                     IKFDSPILSGNAAEDSTELFETDYFGQPAYLSQSGQLYLEAGAMALGRVFDFGPVFRA
                     EKSKTRRHLTEFWMMDAEYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVE
                     ALKRYIAEPFKRVAYDDAITLLQEHEADEDTDYEHIEHGDDFGSPHETWISNYFGVPT
                     FVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDEL
                     GMDKSEYEFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRMLHRLHP"
     gene            4465..>4949
                     /locus_tag="U1041_002032"
     CDS             4465..>4949
                     /locus_tag="U1041_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4769110.1"
                     /translation="MKQESLGKEIIRLALPATVENIFQTLVGFVDTLLIAQLGLVAVT
                     AVSLANTILNVYLAVYMALGVGTTALIARSIGAGDRESLTFHVRQALVLSVGVGMLFG
                     LLSLVFGRQMLVLMGADAESLAGAQVFFYWVGGLTIFQALMTILGTILRASGEWERTR
                     LV"
BASE COUNT         1374 a          951 c         1177 g         1447 t
ORIGIN      
        1 aaatgctctc aaaatgttaa tcaaaaaaaa accagaaatt ctggtttttt tgattattga
       61 attgctgcca acaggtcagc tgcttgttgt tcgagttttg ctagagtttc gtcagataac
      121 tccaatacac ctgttcccca tgcttctgga ttgatggttg aacctgtaaa ttcaccagca
      181 atctgagtac ggataaatgg aagaaggtgt tggaagtctt tgaataggtg gtcgtgacca
      241 ctgttagcga cggcagagac agtggtgatt ttatcttgta ggatagatgg tccttttgga
      301 ttggataaat cgagcgaacg actgagccaa tcgagagcat tttttacgat gcctgggatt
      361 gcatagttat atactggtga gaaaatccag atagcatccg cagcgtctac ttgtgcacgt
      421 agctctgcga tttcagaaag gataggggtc tcgatgtctt ggttgaatag gggaattttt
      481 gcaagatcaa tgtaagatac ttgagcctta tcagccaaga acgcttcagc ttttttggcc
      541 atttgatggt taaaagaacc gtcacgtagt gaaccaacta aaaacaatac gtttgccatg
      601 atggtctcct tttcataaaa acataaattt agtatatcgt atttgtcttt tgttggcaat
      661 cctaggtttg ctgattcttg aattttttaa gtatctcggc taattggtct tgttcttctg
      721 aactaaggac agaaaaaatc tctccaacat gatcataatg ctctggaagg attttttcaa
      781 tggtttcgcg tccaagtgga gtgagagcaa tcaaggaagc acgacggtca tttatatcga
      841 tagtcttgta gatataacca tctcgaatca tgttttttat aacgacagtc atgttgccag
      901 aagtacttaa taatttatca attaagtctt gaatccgcag atttcctttg ttgtagagtg
      961 cctccatcac tccaaactga caaactgtca gtccgtattt tttgattgtt tctaattctg
     1021 attttgtgat agtattagct gctctgcgaa agacgactag actgtgaagt gcatgcttgt
     1081 tctcgtttaa agattgttca acagttctca tgagaatatt ttagcaataa atagttcggt
     1141 tatcaagcaa aaaaagttaa atcctatatt cataggtaaa gtactttata tagcatagag
     1201 gagctgaact gtgggtccca gttcttatat tcgttctctg tctggaggag aatgaaagtt
     1261 tattcacaat tcagttacgg aaaaaatgga aatatgcttt aacttgtagt ataataggac
     1321 tactatggaa aaaaagattt ttcaactttt ggaagtattg gcaacgaaga agggacagct
     1381 gatagctggt tcctttatac tcctaagtgt catgactttt tcgatattcg ttatttggga
     1441 ccttgcagct aagccttttt ctgatgtgca gaatcacgct atttctgtag ctcgagacta
     1501 tacggatata gaggttgttg atgatgtctc tatctacaac gggacagaaa catactttac
     1561 cctacaagga aagacgagtc agggggaaat gattgcggtt atcattcctg aagagacaaa
     1621 tactgtgtac gtttatccaa tggcgaatgg tatttctaag gaagaagcgc aggcagtcgc
     1681 tacagagaat ggtgcgtcaa cagctgatag ggtgattcta ggttttaggg atgacaaacc
     1741 aatttgggaa gtcaaatcag gtactgccta ctatttagtt gaatttgaaa cagggaactt
     1801 tatcaaacgg gagggcttat gagcaagtta tcaagacgag tcttagagat ggaagaaagt
     1861 gtaactctgg cagcaggtgc gcgtgcaaaa gccttgaagg cggaaggacg tgatatttta
     1921 gagctgacct tgggtgagcc agacttcgtc acaccgaaaa atattcaaga agctgctatt
     1981 aagtctatcg aagatggtaa ggcgagtttt tatacggtag cttcaggact tcctgagttg
     2041 aaggacgcag tcgataccta ctttgagaat ttctatggct actctatcga acgcaatcaa
     2101 gtcgttcttg cgacaggtgc caaatttgtt ctctatgctt tctttgcggc ggtcatcaat
     2161 cctggtgatg aggtgattat tccgacacct tactgggttt cttatgcaga tcaaatcaag
     2221 atgaatgatg gggtgcctgt ctttgtcact gcaagggaag agcataattt caaggtaacg
     2281 gttgaccagc tggaagcggc tcggactgac aagaccaagg tcctcttgct caatagcccg
     2341 tccaatccga cgggtatgat ttacacccgt gaggaattgg aagctattgg caactgggct
     2401 gtggaacacg acattctcat cttggcagac gatatttacg gtcgtttggt ctataatgga
     2461 aataccttca caccgatttc aagcatttca gaaagcattc gtcagcagac tattgtggtc
     2521 aatggtgtgg caaaagccta tgccatgaca ggttggcggg ttggatttgc cgttggtaat
     2581 cctgagatta ttgcggccat gagtaagatt gtcggacaaa cgacgtcaaa cctaaccacc
     2641 gctgctcagt atgcagccat tgaagccttt acaggtccgc aagatacagt agaaaccatg
     2701 cgtcaggcct ttgaagagcg actcaatacc atttatccct tgctggcaga agtaccaggt
     2761 tttgaagtga ttaagccaga aggtgccttc tatctcttcc caaatgtcaa aaaggctatg
     2821 gaaatgaagg gctacacaga tgtaactgaa tttaccacgg ccattttgga agaagtagga
     2881 gtagccttgg tgacaggtgc tggttttgga gctcctgaaa atatccgcct cagctatgcg
     2941 acagatatgg acacgctcaa agaagcagtg gctcgactac atacatttat gaaaaaataa
     3001 aaagaggaaa aataatgtct agaaaattga ttaccatcaa ccaagtaaaa gattatgtcg
     3061 gtcaagaagt gaccattggt gcctgggttg ccaacaaatc aggcaagggc aagttagcct
     3121 tcttgcagtt gcgtgacgga acagccttct tccaagcagt tgctttcaag ccaaacttca
     3181 ttgaaaaatt cggcgaagaa gctggtactg agaagttcga tgtagcaaaa cgcctcagcc
     3241 aagaaacgtc tgtctatgtg acagggattg tcaaggaaga tgagcgttct aagtttggtt
     3301 atgagttgga tgtgacagac cttgaagtca tcggtgagtc acaagattac ccaatcacac
     3361 ccaaagaaca cggtacggac ttccttatgg acaaccgtca cctctggttg cgttctcgta
     3421 aacaggttgc tatccagcaa atccgtaatg ccatcattta tgcgacttat gaattctttg
     3481 aaaagaatgg ctttatcaag tttgatagcc caatcttgtc tggaaatgcg gcagaagatt
     3541 caacagaatt gttcgaaaca gactactttg gtcaaccagc ttatctcagt caatcaggtc
     3601 agctttacct ggaagctggt gctatggccc ttggtcgtgt tttcgacttc ggacctgttt
     3661 tccgtgcgga aaaatcaaaa actcgccgtc acttgactga gttctggatg atggatgccg
     3721 agtattcatt cctcagccat gaagagtcac ttgacttgca agaagcttat gtcaaagcct
     3781 tgattcaagg tgttatcgac cgtgctccac aagccttaga aactcttgag cgtgatgtgg
     3841 aggctctcaa acgctacatt gcggagccat tcaaacgtgt ggcttatgat gatgccatta
     3901 cccttcttca agagcatgag gctgatgaag atacagacta cgaacacatc gagcatggtg
     3961 acgacttcgg ctcacctcat gaaacttgga tttcaaacta ctttggtgta ccgactttcg
     4021 ttgttaacta tccagcaagc ttcaaggcct tctacatgaa gccagttcct ggcaatccag
     4081 agcgcgtgct ctgtgcggac ttgcttgctc cagaaggcta cggtgaaatc atcggtggtt
     4141 ctatgcgtga ggacaattac gatgccttgg tagccaagat ggacgagctc ggtatggaca
     4201 agtcagaata cgaattctac cttgaccttc gtaaatacgg ttcagtgcca cacggtggtt
     4261 ttggtattgg tatcgagcgt atggtaacct tcgttgctgg tacaaaacac atccgtgaag
     4321 ccattccgtt tccacgtatg ttgcaccgct tgcatccata agcaaatcaa tagatataca
     4381 aacagactac agatgtggtc tgttttcttg cttttttaat gaatgttatt tataattgtt
     4441 ctaaataaat atgtggagag aaaaatgaag caagaaagtt taggaaaaga aattattcgt
     4501 ttggccttgc ctgctacggt ggaaaatatc tttcagacct tagttggttt tgtggatacc
     4561 ctcttaatag cccagctagg gctggtagcg gtgacggcgg ttagtcttgc caatacgatt
     4621 ttgaatgtct atttggcggt ctatatggct ttgggagttg ggacaacagc tttgattgct
     4681 cggtctattg gcgcaggaga tagggaatct cttacctttc atgtccgtca agccttagtg
     4741 ctttcagtag gtgtaggtat gctatttggt ttactatccc ttgttttcgg gaggcagatg
     4801 ctggtcttaa tgggagcaga tgcggagagt ttggctgggg ctcaggtctt tttctactgg
     4861 gttggtggtt tgacgatttt ccaagctctg atgaccattt tgggaacaat cctgcgggca
     4921 tctggggagt gggaaagaac tcgactagt
//
LOCUS       DASFQS010000128         4926 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.132, whole genome shotgun sequence.
ACCESSION   DASFQS010000128 DASFQS010000000
VERSION     DASFQS010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.132"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            112..606
                     /locus_tag="U1041_002033"
     CDS             112..606
                     /locus_tag="U1041_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEM4769111.1"
                     /translation="MSYFQNFMKANKAYVDLHGTYHLPLKPKTKVAIVTCMDSRLHVA
                     QALGLALGDAHILRNAGGRVTEDMIRSLVISQQQLGTREIVVLHHTDCGAQTFTNEDF
                     TVQLKRDLGVDVAGQDFLPFTDIEESVRADIALLKQSPLIPDDVEISGAIYDVDTGRM
                     TEVI"
     gene            878..1636
                     /locus_tag="U1041_002034"
     CDS             878..1636
                     /locus_tag="U1041_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HEM4769112.1"
                     /translation="MSDNRMKYTIDSNMQFPLVEIALEAGESAYIQQGSMVYHTPSVT
                     LNTKLNARGGSGFGKLMGAIGRSMVSGESMFITQAISNSDDGKIALAPSTPGQVIALE
                     LGAEQYRLNDGAFLALDGSAQYKMERQSVGKAFFGGQGGLFVMTTEGHGTLLANAFGS
                     IKKLTLDGGSITIDNAHVVAWSRDLDYNIHMENGFLQSIGTGEGIVNTFTGYGEIYVQ
                     SLNIETFAQVIGNHIVGAGGDGGGGSTSLLDAIF"
     gene            2403..3227
                     /locus_tag="U1041_002035"
     CDS             2403..3227
                     /locus_tag="U1041_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000746885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class C sortase"
                     /protein_id="HEM4769113.1"
                     /translation="MVFLIGMGILLYPHVSNFYYRYEAGQLTESFDQEKKNLKPKEVQ
                     ERIDLAHAFNESLNNIISEDPYTKSRHEAGRAEYARMLELHEKMGYVEVPKIEAKIPI
                     YAGTAESVLQKGVGHLEGTSLPVGGSDTHTVLTAHTGLPKARLFTDLTKVEIGDTFYI
                     HNISETLAYEVDQILVVEPTQFEELLVKPGQDYATLLTCTPYMVNTHRLLVRGHRVPY
                     VAEDYRKTVENAEMRILIRYLLYALGMLIIILLIFLFTKRRKKKKQVKSGEEVYTA"
     gene            3205..4065
                     /locus_tag="U1041_002036"
     CDS             3205..4065
                     /locus_tag="U1041_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class C sortase"
                     /protein_id="HEM4769114.1"
                     /translation="MKKCIQHKKGLSKQSILLKLIFVFGLLITVYPLISQFYYRYESD
                     REVESFYEQAQQLPSEEVSKRLEKARAYNQTLDPSKMQDPYSEEEKAGIAEYARMLEV
                     KEKIGFVEIPKINEQIPIYAGTTEDVLQKGAGHLEGSSLPVGGESTHTVISAHRGLPN
                     ASLFTNLDRLKIGDQFYIHNIAETLAYEVDQILVVEPSDFDPVMVQSGEDYATLLTCT
                     PYMINSHRLLVRGHRVPYEPKVAAKQKPIFFLDMLSLSYLIAFLLMLLIFGVLYLRRK
                     RKQQKVRGRT"
     gene            4062..4922
                     /locus_tag="U1041_002037"
     CDS             4062..4922
                     /locus_tag="U1041_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class C sortase"
                     /protein_id="HEM4769115.1"
                     /translation="MKKIGYILMLIGLLMPLILLTNMSVHEFQTYRHYQSYQSRSTSF
                     SAEQKAAIDTYEEQINSGDIPTIDPFAEKNSSDSHSVVVPNLEDGVIGYLSIPSIEIR
                     QPIYIGATSQHLNDGVASIIGTDLPVGGMGHRSVIAGHRSWYTDLRFFRLTELKEGDK
                     IFIEIGGTTLTYLVKNTEVIKATDWQKLLPVENQDMLTLLTCDPLVPPFDYRLLVNAY
                     RQPDVAEEDAQSKQTSQEEMKQYQQHSFSFVFYLTIFGWLLLCYILYRFVTLLTNTLR
                     KSKSDVVDLI"
BASE COUNT         1459 a          888 c         1105 g         1474 t
ORIGIN      
        1 tgctaagctt tttattactc ctctttttgc gacaaatggt cgggaatatg ataagctagg
       61 tctaacctgt ttctgaaaaa ttcagaaatt cttatcagac aaggaggccc tatgtcttat
      121 tttcaaaatt ttatgaaggc caacaaggcc tatgttgacc tgcatggtac ctatcacctg
      181 ccgcttaagc ccaagaccaa ggtggctatc gtgacctgta tggactcacg gcttcacgtg
      241 gctcaggcct tgggcttggc tctgggtgat gctcacattt tgcggaatgc gggtgggcgc
      301 gtgacagaag acatgattcg ctcgctagtc atttcccagc agcaactcgg tacacgggaa
      361 atcgtggtgc tccaccatac agactgcggt gcccagacct ttaccaatga agactttacg
      421 gtccaactca agcgggattt gggggtggat gtggctggtc aggactttct tccttttaca
      481 gacattgaag aaagcgtgcg ggcagatatt gcccttttga aacaatctcc gctcatacct
      541 gacgacgttg aaatttcagg ggctatttat gatgtggata cgggtcgaat gacggaagtt
      601 atctagtcat tcagtttatc ttttattacg tcgttaactt gctttgctgt actctacgaa
      661 cgttacttac tgtcgcaagt atgatttcca accttcaaca gtccgctgga ctattgaagc
      721 aacctgcagc tcacttccta gtgctgaaag actatgtaat aaaaatgggg gaacagatag
      781 tgcggcttcc cgtatttttt ataaaaatac ttgacagggt tttgttttag ttgtagaatt
      841 gtgttataga aataacacaa aacaaggaga ccttctcatg tcagacaacc gtatgaaata
      901 cacaatcgac agcaatatgc aatttccttt agtggaaatc gccttggaag ctggtgagtc
      961 agcttatatt caacagggga gcatggttta ccatacgccc agtgtgacct tgaataccaa
     1021 gctcaatgcg cgtggtggtt caggttttgg taaattgatg ggggccatcg gtcggtcaat
     1081 ggtatcaggc gaatctatgt ttatcacgca agccatttcc aatagtgacg atggaaaaat
     1141 tgcacttgcg ccttcaacgc caggtcaggt tattgccttg gaacttggtg cagagcaata
     1201 tcgactaaat gatggtgcct tccttgctct tgatggttct gctcaatata aaatggaacg
     1261 ccagagtgtt gggaaagctt tctttggcgg tcagggtgga ctctttgtga tgacgacaga
     1321 ggggcatggc acacttttgg cgaatgcgtt tggttctatt aagaagctaa ctttggatgg
     1381 tggaagtatc accattgaca atgctcatgt ggttgcttgg agtcgtgatt tggactacaa
     1441 tatccatatg gaaaatggtt tcctccaatc tatcggtact ggggaaggaa tcgttaatac
     1501 ctttactggt tatggagaaa tctatgtaca gagtttgaac attgagacct ttgctcaggt
     1561 cattggcaat catattgtcg gtgcaggtgg tgacggcggt ggtggaagca catcattgct
     1621 ggatgcaatt ttttaatagt ggagaaatag aagctgagga ctacaacctt agcttctatt
     1681 ttatactcaa taaaaatcta aaatagcaag tataagctac ttactaacat gtgggaccta
     1741 aatttataag tttgagttga ggattgtgga tttcaagtag ctgttttctt cttatactca
     1801 atgaaaatca aaatcaggct aggcgatgca gatgcagata gaactgaagt tcatcaaatc
     1861 aagtcaacaa cgtctgatat tgattttcga agagtatcca aaaaataaca aaatcaaaac
     1921 gctccctatc cactttgagt ggtaggtggc tatttttgat tttaaatgag tattagttac
     1981 ccgttgtgct agttaattct agccaaataa aaaaactttg cgtatcataa actcaaaaca
     2041 accacgaaat gagggaatga tatgcaaagc caacattatt atctcgcaaa tcctaattaa
     2101 acacaagtta ttttttcaaa aatctttacc caagttctcg ctttatatga gcgatttgtt
     2161 ccccatgagg ttcgaaatcg gcgaaatatc cacctacaaa aacagtctga tgtcgttgat
     2221 gggatttttt tgtttgagaa ccggattgtg gtataataga ggatatttgg agaaattttc
     2281 aactccgcaa tacgatagaa tataatgaga aaatgatgaa gaaaaaagaa gatcaaattg
     2341 taaaccaaaa gaaatcagtt aaacctaaaa agaaaaaaaa gaagagcaac cttccttttt
     2401 acttggtttt tctgattggg atggggattt tactctatcc tcatgtatca aatttttatt
     2461 atcgctatga ggctggtcag ttgacagagt ctttcgatca ggagaagaag aatttaaaac
     2521 ctaaagaggt tcaagagcga attgatttgg ctcatgcttt caacgaaagt ttaaacaata
     2581 tcatttctga agatccttat actaagtcac gtcacgaagc tgggcgggca gagtatgcga
     2641 ggatgttgga attgcatgag aaaatgggct atgttgaagt tcctaaaatt gaggccaaga
     2701 ttccgattta tgctggaaca gccgagtcag ttttgcaaaa gggagttggg catctggaag
     2761 ggacatcttt gccggtcggg ggaagtgata cccatacagt cttgacagct cataccggtt
     2821 tgccaaaggc gcgtttgttc acagatttga ccaaggttga gattggggat actttttata
     2881 tccacaatat ttcagaaacc ttggcctatg aggtggatca gattttagtt gtggaaccga
     2941 cacagtttga agagcttttg gtaaagcctg gacaggatta tgcaacgtta ttaacttgta
     3001 caccttatat ggtaaacacg catcgtttat tagtgcgtgg gcatcgtgtt ccttatgttg
     3061 ctgaagatta tcgtaaaaca gttgaaaatg ctgaaatgcg tattcttatt cgctatcttt
     3121 tgtatgcatt aggaatgttg attatcattt tattaatttt cctatttaca aaaaggcgga
     3181 aaaagaagaa acaggtgaag agtggtgaag aagtgtatac agcataaaaa aggattgtcc
     3241 aaacaatcca tacttttaaa actgatattt gtctttggtt tgcttattac ggtatatccg
     3301 ttgatttctc aattttatta tcgatatgag tcagaccgtg aagtagaatc tttttatgag
     3361 caagcacaac agctcccgag cgaagaagtt tccaagcgat tagagaaggc gcgggcgtat
     3421 aatcagacct tggatccaag caaaatgcaa gatccatact cagaagagga aaaggctggg
     3481 attgcagaat atgcacgcat gcttgaggtg aaggaaaaaa ttggttttgt ggaaatccca
     3541 aaaataaatg agcagattcc catttatgct gggacaaccg aagatgtatt acaaaaagga
     3601 gctggacatt tagaggggtc gtcattgccg gttgggggag aaagtactca tacagtcatt
     3661 tcagcccatc gtggtttacc gaatgcctcc ttgtttacca atctcgatcg cttaaaaatt
     3721 ggtgatcaat tctatatcca caatatagca gaaaccttag cctatgaggt ggatcagatt
     3781 ttagttgttg aaccgagtga cttcgaccca gtcatggttc aatccggaga agactacgcg
     3841 accttattga cctgcactcc gtatatgatt aacagccatc gtttattagt gcgtgggcat
     3901 cgtgttcctt atgagccgaa agttgcagct aagcaaaagc cgatattctt tttagatatg
     3961 ttgagtcttt cctatttaat tgctttcctg ctgatgctgt tgatttttgg agttttgtac
     4021 cttcgacgta agagaaagca gcagaaggtg agaggaagaa catgaaaaaa ataggctaca
     4081 ttctcatgct gattggttta ttaatgccat taatcttact gacaaatatg tctgtgcatg
     4141 agtttcaaac ttatcgacac tatcagtcct accaaagtcg ttcaacatca ttctcagcag
     4201 agcaaaaagc ggcaattgat acttatgaag aacaaatcaa tagcggagat atcccaacaa
     4261 ttgacccttt tgcagaaaag aatagttcgg atagtcattc tgttgttgtt cctaatttgg
     4321 aagacggtgt gattggttat ctaagcattc caagtattga aattcgccag ccaatttata
     4381 tcggagcgac tagccagcat ttaaatgatg gggtggcttc tattattgga acagatttac
     4441 ctgttggtgg tatggggcac cgaagtgtca ttgcaggtca tcgtagttgg tatacagatc
     4501 ttcgtttttt ccgtttaacg gagctaaaag aaggagataa gatttttatt gaaatcggtg
     4561 ggacaacact gacatatttg gtcaaaaata cagaagtgat aaaggcgacc gattggcaaa
     4621 aattattgcc tgttgaaaat caagatatgt taacgctgtt gacgtgtgat ccgctagttc
     4681 ctccttttga ctatcgctta ttggttaacg cctatcgtca gccggatgta gctgaggaag
     4741 atgctcaatc aaaacagaca agtcaagaag aaatgaagca gtaccaacaa cactcattca
     4801 gcttcgtctt ttatttaacg atatttggct ggctcttatt atgctatatt ctttatcgtt
     4861 ttgtcacctt attgactaat actcttcgaa aatcaaaatc agatgtcgtt gacttgattt
     4921 gatgag
//
LOCUS       DASFQS010000129         4746 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.133, whole genome shotgun sequence.
ACCESSION   DASFQS010000129 DASFQS010000000
VERSION     DASFQS010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4746
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.133"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            162..323
                     /locus_tag="U1041_002038"
     CDS             162..323
                     /locus_tag="U1041_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769116.1"
                     /translation="MDVQKINNEMTYQLTMIQAKELLNKGAITIEEFELFRQLMLEKY
                     QPFISQLST"
     gene            381..1616
                     /locus_tag="U1041_002039"
     CDS             381..1616
                     /locus_tag="U1041_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4769117.1"
                     /translation="MRTVRRIQPIKSPCKPKLKVAAYARVSDSRLHHSLSTQISYYNR
                     LIQANPDWELVGIYYDEGISGKEQSNRQGFQNLIKDCDDGKIDRIITKSIARFGRNTV
                     ELLTTVRQLRLKKIGVTFEKENIDSLSSEGELMLTLLASVAQEESQNMSDNIRWRVQK
                     KFEKGIPHTPQDMYGYRWDGEQYQIEPNEAKVIRKVFKWYLDGDSVQQIVDKLNQEHV
                     LTRLGNPFTVASIREFFKQEAYFGRLVLQKTYRESFSRNPKRNKGQRNKYIIENAHEP
                     IVTKEYFDLVLHEKKRRYQLMHQESHLNKGIFRDKIFCSDCGCLMIVKVDSKHVKKTV
                     RYYCRTRNRFGASSCPCRTLGEKRLLASFKSKLGIVPDKVWVENNIKHIEYDFGHRII
                     RVTPVKGRKYPIEIREGRY"
     gene            1616..3175
                     /locus_tag="U1041_002040"
     CDS             1616..3175
                     /locus_tag="U1041_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006740157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4769118.1"
                     /translation="MRKVITIEATPSIIRSSSDDFSLKKRRVAGYARVSTDHEDQATS
                     YESQMRYYSEYINGRDDWEFVKMYSDEGISGTNTKLRTGFKAMVEDALNGKIDLIITK
                     SVSRFARNTVDSLTTVRQLKEVGVEIYFEKENIWTLDSKGELLITIMSSLAQEESRSI
                     SENVTWGLRKQFAEGKVHFPYTNVLGFKAGEDGAIVVDQDEAKTVRYIFQQALIGKTP
                     YHIAKDLTEQGIPSPSGKSQWNATTIKRMLRNEKYKGDALLQKTFTIDFLTKKKNINR
                     GELPQYYVENNHEAIVDRETFDAVQQVLDNKSRKSSTTIFSSKLVCGDCGHFFGSKVW
                     HSTSKYRRVIYRCNEKYNGSKCSTPHVTEEEVKQWFVSAINQVIDNKIEVIDNLSVLL
                     SIGSLEEIDEQIKVLETEAEVVSQLVANLISENAIIRQDQDKYLDKYYQLSSKYDGIV
                     QEIESLELERLKKSKRNKELHVFMELLNKQEGLLTDFDELMWETMVESITISKEKEVT
                     LIFKNGLVATI"
     gene            3248..3823
                     /locus_tag="U1041_002041"
                     /pseudo
     CDS             3248..3823
                     /locus_tag="U1041_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941630.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
     gene            complement(4144..>4746)
                     /locus_tag="U1041_002042"
     CDS             complement(4144..>4746)
                     /locus_tag="U1041_002042"
                     /inference="COORDINATES: protein motif:HMM:NF019142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4769119.1"
                     /translation="ILETKVTDTAPEQVIKPELKWTTTIVPIPFQTRYIVDNQLKLGE
                     EIILVPGRNGQRQVITLVNGSVVGRNDEEIISDIVLLDPIEQIIKIGNRSTDKAIDLP
                     SKKEKTDISNLGLTLPNNKVSSTPIKLAETPKSIQYLTDRKYDSTVSPSQLQQTNGVI
                     LPKTGEQKENFLARLGYISLLSLEFCWAISTLLKNKRKSK"
BASE COUNT         1589 a          752 c         1015 g         1390 t
ORIGIN      
        1 ttcaactgga acagttaaac tcggtaaagt tgtaggttgg tttagaattt cataattaag
       61 atataagcct ggtggaaaca tcaggcttta tttttttgcc tttttttcaa taagtgcgga
      121 aaatttactc caaaacctac ctagtaaggt aggaggataa tatggacgtt caaaaaatta
      181 ataatgagat gacctatcaa cttacaatga tacaagcaaa ggaacttcta aataaaggag
      241 caatcactat tgaggaattt gaacttttta ggcaattgat gcttgaaaaa tatcaaccat
      301 ttataagcca attatcgacc taataactgg ataatttttt cttttagagt gatatatagt
      361 agcgaaagga gtgtattaat ttgagaactg ttagaagaat acaacccata aaatcgccct
      421 gcaagccaaa attaaaagtt gcggcatatg caagagtttc tgatagtcgt cttcatcatt
      481 ctctgtcaac acagattagc tactataacc gtttgataca agcaaatcca gattgggaat
      541 tggtaggaat ttattatgat gagggtataa gtggtaaaga acaaagtaat cgacaaggct
      601 ttcaaaatct tataaaggat tgtgatgatg gcaagattga taggattatc actaagtcaa
      661 tcgctcgatt tggtcgaaat acagttgaat tactaactac tgttcgacaa ttacgtctga
      721 aaaaaattgg tgttactttt gagaaagaaa atatagatag tcttagctca gaaggagaat
      781 tgatgttaac ccttcttgcc tcagtagctc aagaagagtc tcaaaacatg agtgataata
      841 taagatggcg agtccaaaag aaatttgaaa aagggattcc gcacactcca caggatatgt
      901 atggataccg ttgggatggt gaacaatatc agattgaacc taatgaggca aaagttattc
      961 gaaaagtctt taaatggtat ctagatggag attcggtaca gcagatagtt gataaactca
     1021 atcaggagca tgtcttaaca aggcttggta atccatttac cgtagcaagc atcagagaat
     1081 tcttcaagca agaagcatac tttggtcgcc ttgtcttaca gaagacttat cgtgaatcat
     1141 tctctagaaa tccgaaaagg aataaagggc aacgcaataa gtacatcatt gaaaatgcac
     1201 acgagccgat tgttacaaaa gaatattttg atttagtact tcatgagaag aagcgaagat
     1261 atcagttaat gcatcaagaa agccacttaa ataaaggtat ctttcgtgac aaaatttttt
     1321 gttcagactg cggatgtttg atgattgtta aagtggactc aaaacatgtt aaaaaaaccg
     1381 taagatacta ttgtagaaca cgtaatcgat tcggagcatc gtcatgtcca tgtaggacgc
     1441 taggagaaaa gcgacttttg gcatcgttta aaagcaagtt aggcattgtc ccagataaag
     1501 tgtgggttga aaataatatt aaacacattg agtatgactt tggtcaccgt atcatcaggg
     1561 ttacaccagt aaaaggaagg aaatatccta tagaaattag agaggggcga tattaatgag
     1621 gaaagtaatt actattgagg ctacaccaag tattattagg tcaagttcag atgatttctc
     1681 tttaaaaaag cgtagagttg ctggttatgc tagggtatca actgaccatg aagaccaagc
     1741 aacaagctat gagtcacaga tgcggtacta ctctgaatac attaatggga gggatgattg
     1801 ggaatttgtt aaaatgtact ccgatgaagg tatcagtggt acaaacacaa aattaagaac
     1861 tggtttcaaa gctatggtgg aagatgcact caatggcaaa atcgatttga ttattacaaa
     1921 atctgttagt cgatttgcga ggaataccgt agactcactg actacagtta ggcagttgaa
     1981 agaggtaggt gtagaaatct actttgagaa agaaaacatc tggacattgg attcaaaagg
     2041 tgagctactc ataactatca tgtctagttt ggcacaagaa gaaagtagga gcatatccga
     2101 aaacgtgact tggggcttaa ggaaacaatt cgcagaagga aaggttcatt ttccttatac
     2161 caatgtttta ggctttaagg caggtgaaga tggagcaatt gtagttgatc aggatgaagc
     2221 caaaactgtt aggtacatct ttcagcaagc acttattgga aaaacaccat atcatatcgc
     2281 aaaggatttg actgaacaag gtattccttc tcctagtgga aaatctcaat ggaacgcaac
     2341 cacaatcaag cgaatgctta gaaatgagaa gtataaaggg gatgccttac tacagaaaac
     2401 ttttacaatt gattttctga ccaaaaagaa gaacatcaac agaggtgagt tgcctcagta
     2461 ttatgtggag aataaccatg aagcaatagt agatagagag acctttgatg cagttcaaca
     2521 agtgctcgat aataaaagca gaaagtcgag cacaacaatc tttagttcaa aacttgtatg
     2581 cggagattgt ggtcatttct ttggcagcaa ggtatggcat tcaacctcca aatacagaag
     2641 ggtgatttac agatgtaacg aaaaatacaa tggcagtaaa tgttctactc cgcacgttac
     2701 cgaggaagag gtgaaacagt ggtttgtctc agcaattaac caagtaatag ataataaaat
     2761 tgaggtaatt gacaatctat ctgtattact atccattgga agtcttgagg aaattgacga
     2821 acagataaag gtccttgaaa ctgaagcaga agttgtcagt cagttagttg caaacctaat
     2881 ttcagaaaat gccatcataa ggcaagacca agacaagtac ctcgataagt attatcaact
     2941 gtcttcaaag tatgatggta tagttcagga gattgaatca ttagaactcg agaggttaaa
     3001 aaaatccaaa aggaataagg aattgcatgt tttcatggag ctccttaaca aacaggaggg
     3061 attgttaaca gattttgatg agttaatgtg ggaaactatg gtcgaaagta tcaccatcag
     3121 caaggaaaaa gaagtaactc taatatttaa aaatggattg gtcgcaacaa tataagttac
     3181 gacctttttt tgattatttc ctaaaataat tactgaatat tttttaagaa attgtatcaa
     3241 attgaatact aataccgaca cagatcatgt gggcgatgta ctggaagtgg ctaagcaggt
     3301 acaaattggt cgaatttacg tgtcgccggg aagtctgacg gtgcctgact ttgtagcaac
     3361 tctgaaaaaa atcaatgttc ctgtctatgt ggtaaaagtg ggcgaccgat tgccgatttt
     3421 tgacgcctat ctggaagtcc tctatccaga tgggacagga gacggtggca ataatgactc
     3481 tattgtcctt tacggtcgct tgttggaaac taattttctt tttactgggg acttggagca
     3541 aggggagttg gacttgatag aagcctatcc caacctgcct gtcgatgtcc tcaaagctgg
     3601 tcaccacggt tctaaaggtt cttcctatcc tgaattttta gaccatatcg gagccaagat
     3661 tgctctggta tcagcaggag aaaataaccg ctacaagcac cctcaccaag aaaccttgga
     3721 acgatttgac aatcggaata tccaagtcta tcgcacagac cagcaaggag ccattcgctt
     3781 tctaggttgg agggagtgga ggattgaaac ggtgagggaa tgatgatatg aaaaaaagga
     3841 tctataattt ctacagtgga tttgctcact atagaaatta tagagtcctt taagggagtt
     3901 gggtggcata ggcctattag taagtttatg ctattctatt caatactgtt ttcttatttc
     3961 caaagagttt ttttatctct tgggagagga ggtagacgat tagtatagat ctggtcgact
     4021 ttcaaaagtt cccatcagaa ggaaggagtc gtcaatgtca taagaattag aagtaaccct
     4081 atgttgaact gtctcaaaaa gttagacgga aaagtctaac tttttttggg atggaaatac
     4141 atattattta ctcttccttt tatttttgag aagagttgag atagcccaac aaaattctaa
     4201 agataatagg gaaatgtatc ccaatctggc aaggaagttt tctttttgtt cacctgtttt
     4261 tggtaatatt acgccattgg tttgttgaag ctggctcgga gaaactgttg aatcatactt
     4321 cctgtcagtc agatattgaa ttgattttgg tgtctctgcg agtttaattg gagtagagct
     4381 tactttatta tttggtaatg ttagtccaag atttgaaata tctgtttttt cttttttgct
     4441 tgggagatct attgctttat cggtactgcg gtttccgatt ttgataattt gttcgatcgg
     4501 atcgaggaga acaatatcag aaatgatttc ttcatcgttt cttccaacga ctgagccatt
     4561 tacaagagta ataacttgtc gttgaccatt tcttcctgga acaaggatga tctcttcacc
     4621 aagcttcaat tgattatcca ctatgtatct cgtttggaaa ggaatcggaa caattgttgt
     4681 agtccatttt agttcaggtt ttataacctg ctcaggggca gtatctgtaa ctttggtctc
     4741 taaaat
//
LOCUS       DASFQS010000130         4713 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.134, whole genome shotgun sequence.
ACCESSION   DASFQS010000130 DASFQS010000000
VERSION     DASFQS010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4713)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4713)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4713
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.134"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(50..901)
                     /locus_tag="U1041_002043"
     CDS             complement(50..901)
                     /locus_tag="U1041_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4769120.1"
                     /translation="MSKWKIVADSGCDYRQLANLAPDTEFISVPLTIQVGEKAFVDDA
                     SLDIDHMMEVMEASKSAAGSACPSPQAYQAAFEGAENIIVVTITGGLSGSFNAARVAR
                     DMYIEEHPNVNIHLIDSLSASGEMDLLVDEINRLIGAGLDFPQVVEAITHYREHSKLL
                     FVLAKVDNLVKNGRLSKLVGTVVGLLNIRMVGEASAEGKLELLQKARGHKKSVTAAFE
                     EMKKAGYDGGRIVMAHRNNAKFFQQFSELVKASFPTAVIDEVATSGLCSFYAEEGGLL
                     MGYEVKA"
     gene            1028..1432
                     /locus_tag="U1041_002044"
     CDS             1028..1432
                     /locus_tag="U1041_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4769121.1"
                     /translation="MAGRKISPQSLKNLYQSNKEANQLTKESIETALLFLLEKKELKQ
                     ISVSELVRKAGVSRNAFYRNYKSKEEILEDYYERTSSNLKKKWHDLQDKVQKDGVKQS
                     FADFVQEQKRKAEQSKTLSNVSQWIKEKTKRD"
     gene            complement(1455..2240)
                     /gene="proC"
                     /locus_tag="U1041_002045"
     CDS             complement(1455..2240)
                     /gene="proC"
                     /locus_tag="U1041_002045"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEM4769122.1"
                     /translation="MKIGFIGLGNMGAALAHAVSQQPDTQLLLSNHNSAKAQALQEQL
                     GGQLLSNGQIAEQAEIIFLGVKPHLIQTVLSGLQDQISQNPSAIWISMAAGVTIDSLA
                     AFVSADKIIRIMPNTPVAIGQGMTTYSLVNQELAPLLEQILEKSGKVQQVPESLIDAA
                     TAIAGCGPAFVYQMIEALTDAGVQNGLTAQDAKVLAAQTLAGTAQMVLTSEKHPAQLR
                     QEVTSPGGSTIAGVVALEKEGFRYALIKAVAAALKKTRKLGKK"
     gene            complement(2250..3488)
                     /locus_tag="U1041_002046"
     CDS             complement(2250..3488)
                     /locus_tag="U1041_002046"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEM4769123.1"
                     /translation="MTTTQALLDSLLAHKASINLATTEQKNQALSAMADQLVAQTEAI
                     LVGNAIDMEHAQGKISQVMQDRLLLTAERIEAMADGIRALIGLPDPVGLVLEESTRAD
                     GLNICKKSIPFGLVGMIYESRPNVTSDAAALAIKSGNAVILRGGKEAFHSAQAIVTAL
                     KAGLEQVGLSPKVIELVQDTSRVSATELMTAKGKIDLLVPRGGAGLIQAVVENATVPV
                     IETGTGICHVYVDKDADLDKALQIVVNAKTSRPSVCNSAEVLLVHEEIASQFLPRLEE
                     ALAGQVELRADSQAQALLNQARSVGEQDFDTEFLDYVLAVKVVSNVEEAISHIAQHST
                     GHSEAIVTENSQTAERFTLYVDSAAVYVNASTRFTDGGEFGLGCELGISTQKMHARGP
                     MGLREMTTYKYIITGDGHIR"
     gene            complement(3498..4574)
                     /locus_tag="U1041_002047"
     CDS             complement(3498..4574)
                     /locus_tag="U1041_002047"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEM4769124.1"
                     /translation="MTEKTIVFKVGTSSLTQENGSLDRIKIARITNQLAQLHQKGYQI
                     ILVTSGSIAAGFRRLGFDKRPTKIAEKQASAAVGQGLLIEEYTQNLMKDSIVSAQILL
                     TQDDFADARRYQNASQALQVLLKQRAIPIINENDTIAIEEIKVGDNDTLSAQVASLLK
                     ADLLVLLTDVDGLYTANPNSDPTAQHLPEIKEITEDLFAMAAGAGSSNGTGGMTTKLQ
                     AAQIATKSGVPVFICSSKEDTALLQAVTQANRGTLFLADDHAMNQRKQWMAFYARTDA
                     AVEVDAGAVEAMLHQGRSLLAAGVKALEGDFEVGQVVEVYSQADHRLIGKGRVKLSSK
                     DLQDQLANGRAEGVFIHRNDWVSL"
BASE COUNT         1222 a         1213 c         1013 g         1265 t
ORIGIN      
        1 cttcgtttcc taggctactg ttgattttca ttgagtatta ccctgtgaat cacgctttca
       61 cttcatagcc catcaaaagt ccaccttctt cagcataaaa actgcataga cctgatgttg
      121 caacttcgtc aataacagcc gttggaaaac ttgcttttac caactctgag aattgttgga
      181 agaacttagc attgttgcgg tgggccatga caattcgacc accatcatag cctgcttttt
      241 tcatttcttc aaaggctgct gtcacagatt tcttatgacc acgcgccttt tgaagcaact
      301 ctaattttcc ttcagcgctt gcctcaccaa ccatacggat attgagaaga ccaacgacag
      361 tgcctaccaa tttgctcagt cttccattct taacaagatt atcaaccttc gctaaaacaa
      421 agaggagctt actgtgttcc cgataatgag ttatcgcttc tactacttgt ggaaaatcta
      481 atcctgcacc aattaagcga ttgatttcgt caacaagtaa atccatttcc ccactggctg
      541 acaaactatc tatcaaatgg atattcacat tcggatgctc ttcgatatac atatccctag
      601 ctacacgtgc cgcattaaaa ctacccgata gccctcctgt aatcgtcaca acgataatgt
      661 tctcagctcc ctcaaaagct gcctgataag cctgcggact tggacacgcc gaccccgctg
      721 cagacttaga tgcttccatc acctccatca tgtgatcaat atccaagctt gcatcatcaa
      781 caaatgcttt ttctccaact tggatggtaa gtggcacact aataaattca gtgtccggag
      841 ctagattagc taattgacga tagtcgcagc ccgaatctgc aacaattttc cattttgaca
      901 taatattctc atttccaatt ttactttttt atttgacaat aaatctctat ttacttacaa
      961 ttatatcatt aaactaccct atctgaaagc attttctttc agatgtgaca ctcggaaaag
     1021 gaaaactatg gcaggtcgta aaatttcacc ccaatctttg aaaaacctct atcaatcaaa
     1081 taaagaagcg aatcaactga ctaaggaatc aatagaaact gctctgctat ttctcctaga
     1141 gaaaaaggag ctcaagcaaa tttcggtatc tgaattggtc cgaaaagctg gtgtgtcacg
     1201 caatgccttc taccgcaatt acaagtccaa ggaagaaatc cttgaagact actacgaacg
     1261 gacttctagc aaccttaaaa agaaatggca tgatttgcag gacaaggttc aaaaggatgg
     1321 cgtcaagcaa agctttgcag attttgtcca ggaacaaaaa cgcaaggcag agcaaagcaa
     1381 aaccctgtcc aacgtcagtc aatggatcaa ggaaaaaaca aaacgggatt aaaagtcccg
     1441 ttttttgctg tcttctattt tttacccaat tttctcgtct ttttgagggc ggcggcgact
     1501 gccttaataa gggcgtaacg gaagccttct ttttcaaggg ctaccacgcc tgcgatagtt
     1561 gagccgcctg gcgaggtcac ttcctgtctc agctgggctg ggtgcttttc gctggttaag
     1621 accatctgag cagttccagc aagggtctgg gccgccaaaa ccttggcatc ttgagctgtg
     1681 agcccgtttt gcacaccggc atcggtcaaa gcctcaatca tctgatagac aaaggctggt
     1741 ccgcagcctg cgatagccgt tgctgcgtcg atcaggctct ctggcacttg ctggaccttg
     1801 cctgattttt ctaggatttg ttccaatagc ggagcgagct cttgattgac caagctatag
     1861 gttgtcatgc cttggccgat agcgactggt gtgttgggca tgatacgaat gatcttgtct
     1921 gccgatacaa aagctgccag gctgtcaatg gtcactcccg ctgccataga aatccagata
     1981 gctgacggat tctggctaat ctgatcctgt aagcccgaca agactgtctg aatcaggtga
     2041 ggcttgaccc caaggaaaat aatctcggcc tgctctgcta tttgtccatt agacaatagc
     2101 tgaccgccca gctgttcttg aagtgcctga gctttagccg agttgtggtt gctgaggagg
     2161 agctgggtat ctggctgctg actgactgca tgagccagag ccgcccccat attgcccagt
     2221 ccgataaatc caatcttcat cttgtcctcc taacgaatgt gcccgtcgcc tgtgatgatg
     2281 tacttgtaag tggtcatttc tcgcagtccc attggaccac gggcgtgcat cttctgggtg
     2341 gaaataccaa gctcacagcc taaaccgaac tctccaccgt ctgtgaagcg agtcgaggca
     2401 ttgacataga ccgccgccga atcgacataa agtgtgaaac gctctgctgt ctggctgttt
     2461 tccgttacga tagcctcgct gtgccctgtc gagtgttgag cgatgtggct gatagcctct
     2521 tctacgtttg aaacgacttt gacagccaga acatagtcca gaaattctgt atcaaaatcc
     2581 tgctcaccta ccgatctggc ttggttgaga agagcctgag cctgactgtc agcacgtaat
     2641 tccacctgac ctgccaaagc ttcctccaaa cgaggtagga attggctggc aatttcttca
     2701 tggactagca agacctccgc cgaattgcag actgacggac gactggtttt agcgttgacc
     2761 acaatctgaa gagccttatc caaatccgca tccttgtcta cataaacatg gcagataccc
     2821 gtgcctgttt cgataactgg cacagtcgca ttttctacta cggcttgaat gagccctgca
     2881 ccaccacgtg gcaccaagag gtcaattttg cctttggcag tcatcaactc ggtcgcagag
     2941 acacggctgg tatcttggac tagctcgatg accttaggtg ataggccaac ctgctccaaa
     3001 ccagccttga gggctgtgac aatagcctga gccgaatgaa aggcttcctt gccaccacgc
     3061 aagatgaccg cattaccact cttgatggcc aaggcagcgg catctgaagt cacgtttggt
     3121 cggctttcgt aaatcattcc caccaaacca aagggaatgg atttcttgca aatgttcaag
     3181 ccgtctgccc gagtagattc ttccaagact aatccgacag gatctggcaa gccaatcaag
     3241 gcccgaatgc catctgccat ggcttcaatc cgttccgctg tcagtagcaa acggtcctgc
     3301 atcacctggc tgatcttgcc ttgggcatgt tccatgtcga tggcattgcc tactaaaatt
     3361 gcctcagttt gagcaaccaa ctggtctgcc attgctgata gagcctggtt tttctgttcg
     3421 gttgtcgcta ggttgataga ggccttatgg gccaataaac tatctaataa tgcttgtgtt
     3481 gttgtcataa atttctccta taggcttacc caatcgttgc ggtgaataaa cacgccctct
     3541 gctctgccat ttgccaactg gtcctgcaag tccttggagg acagcttgac ccgcccttta
     3601 ccaatcaagc ggtgatctgc ttgactgtaa acttccacga cctgtcctac ctcaaagtcg
     3661 ccttctaggg ctttgacacc agcagctaac aaactgcggc cttggtgtaa catggcctca
     3721 accgcacctg catccacctc aactgctgca tctgtccgag cgtagaaagc catccactgc
     3781 ttgcgttggt tcatggcgtg atcgtcagct aaaaagaggg tgccacggtt ggcttgagtg
     3841 accgcttgca aaagggctgt atcctccttg gatgagcaga taaagacagg tactcccgac
     3901 ttggtcgcaa tctgtgccgc ctgcaatttg gtggtcatgc cacccgttcc gttggacgaa
     3961 ccagctcctg ccgccatggc aaataagtct tccgtaattt ccttgatctc cggcaaatgc
     4021 tgggcagtcg gatcgctgtt aggattggca gtgtaaagtc cgtccacatc cgtcaaaagc
     4081 accaagaggt ctgctttcaa gagagaagcc acctgagcag ataaagtatc gttatcccct
     4141 accttaatct cttcaatggc aatggtatca ttttcgttga taataggaat agcacgttgt
     4201 ttcagcaaga cctgcaaggc ttgagaggca ttctgatagc gtctagcatc cgcaaaatca
     4261 tcctgggtca gcaaaatctg agccgacaca atgctatcct tcattagatt ttgcgtgtat
     4321 tcctcaatca gcaaaccttg tccaacagcc gcagaagcct gcttctccgc aatcttggtc
     4381 ggtcgcttgt caaatcccaa tctccgaaaa ccagcagcaa tcgatcctga cgttaccagt
     4441 ataatctggt agcccttctg atgcaactga gccagctgat tggtaatccg agcaatcttg
     4501 atccggtcca aactgccatt ttcttgggtc agggaactgg tccctacttt aaaaacaatc
     4561 gttttttctg tcataatctc ttctcacaaa aactaatatt tggaaaatta taccatattt
     4621 taatcataaa gaaaatcact gttattcggc aaggagagag ggaatatgag tagcattaaa
     4681 aaacgctggg aacaaaaggg agccttgcgg ctc
//
LOCUS       DASFQS010000131         4668 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.135, whole genome shotgun sequence.
ACCESSION   DASFQS010000131 DASFQS010000000
VERSION     DASFQS010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4668
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.135"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(36..866)
                     /locus_tag="U1041_002048"
     CDS             complement(36..866)
                     /locus_tag="U1041_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4769125.1"
                     /translation="MIKLIATDMDGTFLDGQGSFDRERFSKVLEKLEEKHIPFVIASG
                     NGIGRLLQLCQGFEDRLIFVADNGAHVYQNGKTVIRRVIQQVEVEAILHFFKGRWADV
                     CLMLSNEENIYMQAGAGMPFAGTDLPIEPAQMAAFQNRVTYLDNLSAYPVSESIYKVG
                     LWVPEARVESITEEFNQAFQGRLTAVTSGYGSIDILPEGIHKAWGLEQVLTCLDIEPE
                     QVMAFGDSDNDIELLSYVGYSYAMENATDKVKAVAKYRAPSHLEAGVLQVLEEHVLQR
                     "
     gene            complement(1000..2565)
                     /locus_tag="U1041_002049"
     CDS             complement(1000..2565)
                     /locus_tag="U1041_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006740157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4769126.1"
                     /translation="MKKIITVEPVKQVIHKVNLPSFTKRRVAGYARVSTDHEDQTTSY
                     EAQMTYYTNYINSRSDWELVKMYSDEGISGTNTKKRLGFQEMVEDALDGKIDLILTKS
                     VSRFARNTVDSLSTVRKLKEAGVEIYFEKENIWTFDSKGELLITIMSSLAQEESRSIS
                     ENVTWGRRRRLAEGQVTFSYSQVLDFKKSDSGGFEIDHEEAKIVRYIFHQVLLGNNPN
                     KIARELTAQGIPTPQGKRKWSYGTVKRMLRNEKYKGDALLQKSFTTDFLTKNTKPNEG
                     ELPQYYVENNHEAIIKREVFDLVQVELDKLEKKRQTSNIFAGRLFCGDCGSAFGSKVW
                     HSTSKYKRTIYQCNAKYKGEHKCRTPHVTEEEIKGWFLSAINQLLSNRDEIIANTELL
                     IDMAKDTSPLESRIDDLEHHLETIRQDIEDLVDRNARKAQNQELYQEQYDTLVTAYQE
                     KQKELQETRSSLEEQKSKRIGLDGFIQQLKEQDDLITDFNQELWQTSVERLDIKVGKK
                     ISLTFKNGVRIDL"
     gene            complement(2568..3776)
                     /locus_tag="U1041_002050"
     CDS             complement(2568..3776)
                     /locus_tag="U1041_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000809551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4769127.1"
                     /translation="MKQIKTIQAKKVTAIKRLKVAAYTRVSHTSLLQSLSNQVSHYSQ
                     LIQANPEWDYVGVYSDSAISGRSQTHRRDFQQLLEDCRKGKIDLILTKSISRFGRNTV
                     ELLETVRELKRLGISVRFEKEKIDTLTAEGELLLTLLASIAQEESQSISQNIRWRVKK
                     RFEEGKPYIPQDIFGYRWNGEEYVIEPHEASIVRQVFEWYMEGLSAQKIAKRLDDRGE
                     RTRLGNRFTKRIIYNMFDQEAYCGRLILQKTFRNHFGSRSIPNDGKMAKYIVENAHEA
                     IVTPEYFQQVNQEKKRRSRRRVSKHGALARFQGKVYCEHCGLDMILTLETKSNQEKRV
                     RYYCRTRDAKGVEACLGRTVTEEQLFQAFGESINVEDIHHISFNSVTNEAKATYRNGE
                     EKYVSIQKGR"
     gene            complement(3833..3994)
                     /locus_tag="U1041_002051"
     CDS             complement(3833..3994)
                     /locus_tag="U1041_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017643178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769128.1"
                     /translation="MTEQDIQQELTYQLTMAQAKQLLSQGLISEAIFQEFKTKMLEKY
                     EPFMSQLVA"
     gene            complement(3991..4392)
                     /locus_tag="U1041_002052"
     CDS             complement(3991..4392)
                     /locus_tag="U1041_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017643177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma-70"
                     /protein_id="HEM4769129.1"
                     /translation="MTPEQKVAIRYLREHGLGYKAIGIKLNLSINTIKSFCRREVIKA
                     DDKTDDELPDYCHACGRILSHIDGKKKKRFCGTSCRQTWWNSHLEEVNRQAYTEHVCL
                     ACGSEFISYANPKRKYCSRKCYVTARFGDKR"
BASE COUNT         1174 a         1124 c          861 g         1509 t
ORIGIN      
        1 ggtgctgggc tttctgccca gcctcagctt tttctttatc gctgtaaaac atgttcttca
       61 agcacctgta atacacctgc ctccagatgg ctgggagctc ggtacttggc tactgccttg
      121 accttgtctg tcgcattttc catggcatag gaatagccaa cgtaggacaa taactcaata
      181 tcattgtctg aatcaccgaa ggccattacc tgttcaggtt cgatatctaa acaggtcaaa
      241 acctgttcca acccccatgc cttatgaatc ccttctggca atatatcaat ggagccatag
      301 ccacttgtca ctgcagtaag acgaccttga aaagcctggt taaactcttc cgttatcgat
      361 tctacacgcg cttcaggaac ccagagacca accttgtata ttgactctga aactggatag
      421 gcactaaggt tgtctaaata tgtcacacga ttttggaaag cagccatctg agctggttct
      481 attggcaaat ccgtccctgc aaacggcata cctgccccag cctgcatata aatgttttct
      541 tcattcgaca acatcagaca tacatccgcc caacgtcctt tgaaaaaatg cagtattgct
      601 tcgacttcca cttgctgaat aacccgacga attactgtct tgccattttg atacacatgg
      661 gctccattat ccgctacaaa gattaatctg tcttcaaatc cttggcataa ttgtagtaat
      721 cgcccaattc cattaccact agcgataaca aaaggaatat gtttctcttc tagcttctcc
      781 aggaccttcg aaaatcgctc tctatcaaaa ctcccctgac catctaaaaa ggtcccatcc
      841 atgtctgtcg caatcaactt tatcatacaa tctaaccttt tccctttcaa gggggtgcaa
      901 aaccctaaag gggtgtgcaa ctcgaatcct aatataactt cttctattat aacacagaaa
      961 caccaaaaaa gacgtgcaga attgacacgc ccttgtcttc tataaatcaa tccgtacgcc
     1021 atttttgaat gtcaggctga ttttcttacc cactttgatg tctagtctct caacactggt
     1081 ctgccagagt tcttggttga agtctgtgat gaggtcgtcc tgctctttga gttgttggat
     1141 aaaaccatct aggccaattc tcttactttt ctgctcttcc aaggatgacc tagtttcctg
     1201 caactctttc tgtttttctt ggtaggctgt tactagggta tcatactgct cttggtagag
     1261 ttcttgattc tgagccttcc tcgcattcct atcgaccaag tcctcgatgt cttgtcgtat
     1321 ggtttcaagg tgatgctcca agtcatcaat cctagattca agtggcgagg tgtcttttgc
     1381 catgtcaatt aagagttctg tatttgcgat aatctcatct cgattactga gaagttgatt
     1441 gatagctgag aggaaccaac ctttaatctc ttcctccgtc acatgaggtg tccgacattt
     1501 atgctcgccc ttgtatttgg cattgcactg gtagatggtt cgtttgtact tgctagtgga
     1561 atgccacacc ttactcccaa aggctgaccc acaatcacca cagaacagtc gtcctgcgaa
     1621 aatgttgctg gtttgtcgtt tcttctctag cttatccaat tcaacctgaa ccaaatcaaa
     1681 gacttcacgc ttgataatgg cttcatggtt gttttctacg taatactgag ggagttcccc
     1741 ttcattaggt ttggtgtttt tggtcaagaa atccgttgta aaacttttct gaaggagggc
     1801 atctccttta tatttttcgt tccgaagcat acgcttaact gtgccataac tccacttcct
     1861 tttcccttgt ggggtcggaa ttccttgagc agtcaactcc cttgcgattt tgttgggatt
     1921 gtttcccaat aagacctgat gaaaaatata ccgaacaatc ttagcttcct catggtctat
     1981 ttcaaaacca cccgagtcac ttttcttgaa gtctaatact tggctgtagg aaaatgtcac
     2041 ttgcccttcc gccaatcggc ggcgtctgcc ccaggtcacg ttctccgaaa tggaacggct
     2101 ctcttcttga gccagactcg acatgatggt aattagaagt tcccctttgg aatcaaaagt
     2161 ccaaatattc tccttctcaa agtagatttc tacaccagct tccttcaatt tgcgtacagt
     2221 cgataatgaa tctactgtat ttctagcaaa tcgactgacc gacttggtta ggataaggtc
     2281 tatcttccca tcaagggcat cttcaaccat ttcttgaaag ccaagtctct ttttggtgtt
     2341 tgttccacta atcccttcat cggaatacat cttgaccaat tcccaatccg aacgactgtt
     2401 gatgtagttc gtgtagtatg tcatctgtgc ttcataagaa gttgtctggt cttcatggtc
     2461 agttgatact ctggcataac ccgccactcg tcgtttggta aagctcggca ggttaacctt
     2521 atgaattact tgtttgactg gttctaccgt gataattttc ttcatgtcta ccgtcctttc
     2581 tgaatgctga cgtacttttc ttctccattt ctataggtcg ctttagcttc attggtcacg
     2641 ctattaaaag aaatatgatg aatgtcttct acatttatgc tctcaccaaa ggcttgaaag
     2701 agctgttctt ctgtaacggt acgtcctaga caagcctcga cacccttggc atctcttgtc
     2761 ctgcagtaat acctcactcg cttttcctga ttagatttgg tctccaaagt taaaatcatg
     2821 tctaaaccgc agtgctcaca atacactttg ccttggaatc ttgctagggc accatgcttt
     2881 gatactctcc tcctcgatcg tcgctttttc tcttgattga cctgttggaa atactctggt
     2941 gtcacaatgg cttcgtgggc attctcaacg atatactttg ccatcttccc atcgtttgga
     3001 atggagcgac tgccaaaatg atttcgaaag gtcttctgta aaatcaatcg tccgcagtag
     3061 gcttcttggt caaacatgtt atagataatt cgcttagtaa agcgattacc tagccttgtt
     3121 cgctcacccc tatcatcaag ccttttagct atcttttggg ctgaaagtcc ttccatatac
     3181 cattcgaaga cctgtctgac aattgaggct tcatggggtt caatcacata ctcttcgcca
     3241 ttccatcgat agccaaagat gtcttgagga atataaggtt tcccttcttc aaagcgtttc
     3301 ttcactctcc atctgatgtt ttgactgata gactgtgatt cttcttgagc tatagaagca
     3361 agcagggtta aaagcaactc cccttcagcg gttagggtgt caatcttctc cttttcaaag
     3421 cgaacactga taccaagtcg cttcagctca cgaacagttt ccaaaagctc caccgtattt
     3481 cgcccaaagc gtgaaatgga cttggttaag attaggtcaa tcttaccttt ccgacaatct
     3541 tcaagtaact gttgaaagtc tcgtctatga gtttgactgc gaccactaat ggctgaatcg
     3601 ctgtaaaccc ccacatagtc ccattcagga tttgcctgta ttaattggct gtagtggctg
     3661 acttgattgg ataaggactg gagtaaactc gtatgcgaaa ccctagtgta tgcggccacc
     3721 tttaaccttt tgatggcagt tacctttttg gcttgtatcg ttttgatttg tttcattgat
     3781 acatctcctt tcgctattat atatcactct taagccctta tttatcaagt ctttaggcca
     3841 ctaattggct cataaatggc tcatattttt cgagcatttt tgtcttaaat tcttggaaga
     3901 tggcttcaga aatcagacct tgggacagga gctgcttggc ctgtgccata gtcagttggt
     3961 aggtaagttc ttgttgaatg tcttgttctg tcatctcttg tctccaaatc tagcagtcac
     4021 atagcacttg cgactacaat attttctctt gggattagca taggagataa actcgctacc
     4081 acaagccagg cagacatgct cagtataggc ctgtcgattg acttcctcca aatggctatt
     4141 ccaccaagtt tggcgacagg acgttccaca aaaccgtttc tttttcttac cgtctatatg
     4201 cgacaaaata cgaccacaag catgacaata atctggcagt tcgtcatcgg ttttatcgtc
     4261 tgcttttatt acctctctac gacaaaatga cttaatggta ttaatagata aattgagttt
     4321 tatgcctatg gctttataac caagaccatg ttctcgtaaa tagcgaatag ctactttttg
     4381 ttctggggtc attttattcc tccttctacc tactagggga aattgtgaac agtttagtcc
     4441 aaatataatt ttattcctcc tactttacta ggtaggtttg ggagtaattt ttccgcactt
     4501 tttgaaaaaa agtcaaaaaa aataaagcct gatgttccca ccaggcttaa gacttaatta
     4561 tgatattcta aaccaaccta caacttttcc aagtttaact gttccagtag aatcatagag
     4621 tgagccatcc gccatccatt gacgtttcac acgacgagtg atcccacc
//
LOCUS       DASFQS010000132         4595 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.136, whole genome shotgun sequence.
ACCESSION   DASFQS010000132 DASFQS010000000
VERSION     DASFQS010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4595
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.136"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            113..2131
                     /gene="recG"
                     /locus_tag="U1041_002053"
     CDS             113..2131
                     /gene="recG"
                     /locus_tag="U1041_002053"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEM4769130.1"
                     /translation="MKRLCDELSVLPGIGPKSAEKFLKINIQNINDLLAYYPFRYEDF
                     ESKSIYDLQDGEKAVVVGEVVSPANVQYYGYKRNRLRFSMKQGEVVLAVSFFNQPYLA
                     DKIVLGQDIAVWGKWDKAKASLTGMKVLAQVSDELQPVYHVAQGISQVNLVKAIKTAI
                     DQGYLHLLEENLPSVLRERYRLMNRREAVFAMHFPTNLEEYRQALRRMKFEELFYFQL
                     QLQMLKANNRDISNGLKIAYDADRLAMQIRQLPFVLTDAQSGALAEILSDMKSYGHMN
                     RLLQGDVGSGKTVVAGLAMFAAVTAGMQAAIMVPTEILAEQHFESLRQLFPELSIALL
                     TGGMKATERRTALEAISSGQVDIIVGTHALIQESVTYHKLGLVVTDEQHRFGVKQRRL
                     FREKGDNPDVLMMTATPIPRTLAITAFGDMDVSIINQLPAGRKPIITRWVKHQQLPTV
                     LDWLEKELKSGAQVYFISPLIEESEALDLKNAVDLQSDLQAHFGEQVTVDLLHGKMKN
                     DEKDGIMQAFKERKTNILVSTTVIEVGVNVPNATVMVIMDADRFGLSQLHQLRGRVGR
                     GHKQSYAVLVANPKTESGKERMKIMTETTDGFILAEADLKMRGSGEIFGTRQSGLPEF
                     QVANIIEDYPILEEARRVASQIVSVENWQEDPNWSILLANLKDREELD"
     gene            complement(2195..3154)
                     /locus_tag="U1041_002054"
     CDS             complement(2195..3154)
                     /locus_tag="U1041_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEM4769131.1"
                     /translation="MKKILVLHTGGTISMQANHQGEVASSKINPMTQIDSPLEEIQVT
                     SLDFLNVPSPHIRLEHMMTLYQKIKEEQMNFDGFVITHGTDTLEETAYFLDTMAIPEK
                     PIVLTGAMRSSNELGSDGIYNYRTALRVAADDKSADKGVLVVMNDEIHAAKYVTKTHT
                     TNVSTFQTPTHGPLGLVTKREILYFKTAEPRVRFDLSTVTGTVPIIKAYADMDSILLD
                     SLNASSISGLVIEALGAGNLPPTILPAIKKLLDQKIPIILVSRCFNGIAEPVYAYQGG
                     GIQLEQDDILFVKELNAQKARLKLLIALNAGLEEQSLADYIQG"
     gene            3224..4069
                     /locus_tag="U1041_002055"
     CDS             3224..4069
                     /locus_tag="U1041_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4769132.1"
                     /translation="MTIKAVFFDIDGTLLTDNRMVSGSTILAINALKEKGILVGLATG
                     RDPRFVLQYMASLGLDLAIAYNGQYIFSRAEVIYSQSLEPKQIEQIMEYAQTHHKDLS
                     FGTAKGIFGSKIMSAGTGNFAYRVTRMIPESWAGVINFIFNRLVRWISPQQETNLKGF
                     LFQPIYQLMLLTTERETQSLEMLFPNLSFTRSSPYATDIISKGNSKLSGIVKVADRYG
                     FELDEVMVFGDSNNDFEMLNEIQHSVAMGNGTKKVKQAASFVTDTNNRDGIYKALIHF
                     GVIEV"
     gene            4071..4589
                     /locus_tag="U1041_002056"
     CDS             4071..4589
                     /locus_tag="U1041_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4769133.1"
                     /translation="MFQSKDDNFNRVKDFHFLMDGETQELPSVYDGQTALHRAGFKVE
                     ELVEFLHAASESEVEFHDFIQQLHQDLDTAAAKVSGKRSFGVSMQDQVDALLDILYFT
                     YGSFVLMGVDPEPIFQIVHTANMGKTFPDGKAHFDPITHKILKPDDWEERFAPEEKIQ
                     EELKRQMKRLDS"
BASE COUNT         1278 a          705 c         1135 g         1477 t
ORIGIN      
        1 ggaggctgct taggtctctt tttttgtttt ttgaggtgaa taggctttaa tttggctcct
       61 ttttcttttc ttgttacttt gtctattcat tgtttgttga tataatagag acatgaaaag
      121 attatgtgat gaattatcgg ttttgccagg gattggtcct aaatcggctg aaaaattctt
      181 aaaaattaac attcagaata ttaatgattt gctggcttac tatccattta gatatgaaga
      241 ttttgagagt aagtctattt atgatttgca ggacggggag aaggcagtgg tagttgggga
      301 ggtggtatct ccagctaatg tacagtatta tggttacaaa agaaatagac tccgtttttc
      361 aatgaaacag ggtgaggttg tcttagcagt ttcgtttttt aatcagcctt atttagcaga
      421 taagattgtt ttggggcagg atattgcagt ttggggaaag tgggataagg ctaaggcaag
      481 tttgacagga atgaaagttt tggctcaagt atcagatgag ctccaacctg tctatcatgt
      541 ggcgcaaggg atttcgcaag taaatttggt taaggctatt aaaacagcta ttgatcaggg
      601 atatttacat ttattagagg agaacttgcc atcagtttta cgagagcgct atcggttaat
      661 gaatcgccga gaggcggttt ttgcgatgca ttttccgaca aatttagaag agtatagaca
      721 agctttgcga cgtatgaagt ttgaggaatt attttatttt caattacagt tgcaaatgct
      781 gaaagccaac aatcgtgata tttcgaatgg tttgaagatt gcctatgatg ctgatagatt
      841 ggctatgcaa ataagacaat tgccgtttgt cttaacggat gctcagtctg gggctttggc
      901 tgaaatacta tcagatatga agtcctatgg gcacatgaat cgcttgttac aaggggatgt
      961 tggttcagga aagacagtag ttgctggatt ggctatgttt gccgctgtga ctgcggggat
     1021 gcaggctgca attatggtgc cgacagaaat tttggctgag caacactttg agagtttgcg
     1081 ccagcttttt ccagaacttt ctattgctct tttgacaggg ggaatgaagg ctacggagcg
     1141 tcgtactgct ttagaggcga tttctagtgg tcaggtagac atcattgtag gaactcatgc
     1201 tcttatacag gaaagtgtga cgtaccataa gcttggtttg gttgtgacgg atgagcaaca
     1261 tcgttttggt gttaaacagc gccgtctgtt tcgtgagaag ggtgataatc cggatgtgct
     1321 tatgatgact gctacaccta ttcctcgtac gttagccatt acagcttttg gagatatgga
     1381 tgtatcgatt attaatcagt tacctgctgg tcggaagcca attatcactc gctgggtcaa
     1441 acatcaacag ttgcccacgg tcttagattg gttggagaag gagcttaaga gtggtgctca
     1501 ggtttatttt atctctccgc tgattgaaga atctgaggct ctagatttaa agaatgctgt
     1561 agatctgcaa tctgatttac aggcgcattt tggagagcaa gttacagtgg atttgttaca
     1621 cggtaagatg aagaatgacg agaaagatgg catcatgcag gcttttaagg agcgaaaaac
     1681 gaatattttg gtttctacca ctgttattga agtcggagtc aatgtgccca atgcaacggt
     1741 gatggttatt atggatgctg atcgttttgg tttaagccaa ttacatcagt tgagagggcg
     1801 tgtaggacgt ggtcataagc agtcttatgc agtgttagtt gctaatccta aaacagagtc
     1861 tggtaaggaa cgcatgaaaa ttatgacaga gacgacagat ggttttattt tggctgaagc
     1921 tgacttaaaa atgcgtgggt ctggagaaat atttgggact cgtcaatcag gtttgccaga
     1981 atttcaggtt gcaaatatta tcgaggacta tccaatttta gaggaagcaa gacgagttgc
     2041 tagtcagatt gttagcgtgg aaaattggca ggaggaccct aattggtcga ttttgcttgc
     2101 taatttgaaa gatcgagagg aattggacta gtcataaaaa aaaggccaac acacatgtgt
     2161 tggtcttttg acatattgaa tagttcgtta gcgattaacc ttggatgtaa tctgccaagc
     2221 tttgctcttc taagcctgca ttgagagcga taaggagttt gagtcgggct ttttgagcat
     2281 tcaattcttt aacaaataga atgtcgtctt gctccagttg gatgccacct ccttggtagg
     2341 catagacagg ctcagcaatt ccgttaaaac agcgagatac cagaataatg ggtatctttt
     2401 gatcaaggag tttcttaatg gctggaagga tggtaggcgg aagatttccg gcgccgagtg
     2461 cttcaatgac taaaccggaa attgagcttg cattgagaga atcaaggaga atggagtcca
     2521 tatctgcata agcttttatg attgggaccg ttcctgtgac tgttgataag tcaaatcgaa
     2581 cacgtggttc agcagtttta aaatagagaa tctctcgttt ggtgactaat cccagtggtc
     2641 catgggttgg tgtttgaaag gttgagacgt tggtggtatg cgtttttgta acatatttag
     2701 cagcatgaat ttcatcgttc atgaccacta gaacaccttt atctgcggat ttatcatcag
     2761 cagccacacg tagggctgtt cggtagttat aaatcccgtc gctacccagt tcatttgagg
     2821 aacgcatagc tccggtcaat acaattggtt tttctggaat agccattgta tcaaggaaat
     2881 aggcagtttc ttctaaagta tctgtgccat gtgtaatgac aaaaccatcg aagttcattt
     2941 gttcttcttt aattttttgg tatagagtca tcatgtgttc taagcgaatg tgtggacttg
     3001 gaacattgag aaaatccaag gatgtcactt gaatttcttc tagtgggcta tcaatttggg
     3061 tcattggatt gattttactc gatgcaactt caccctgatg attggcttgc atagaaatgg
     3121 ttccacctgt atgcagtact agaatttttt tcataaattt tcagtttctt tcaaagtgtg
     3181 atatactaat tgtaacataa ttcttagaaa gtaggtgagt tggttgacga taaaggctgt
     3241 atttttcgat attgatggta ccttattgac cgacaatcgt atggttagtg gttcaactat
     3301 tctcgccatt aatgctttga aagagaaggg gattttagtt ggtctagcta caggacgtga
     3361 ccctcgtttt gttttgcagt atatggctag tttagggcta gatttggcca ttgcttataa
     3421 tggtcaatat attttttcaa gagcagaagt tatttatagt cagagtttag agccaaagca
     3481 aattgaacaa attatggagt atgcgcaaac tcaccataag gatttatctt ttggaactgc
     3541 taaaggcata tttggtagta agattatgag tgctggaaca ggaaattttg cctatcgtgt
     3601 gacgcgtatg attccggagt cctgggctgg agtcataaat tttattttca atcgtttggt
     3661 acgttggatt agtcctcaac aggaaacgaa tttaaaaggt tttctctttc aaccaatcta
     3721 tcagctgatg ttgctgacga cggaaaggga gacgcaatca ttggagatgc tctttccgaa
     3781 cttgtctttt acgcgttcga gtccttatgc gactgatatt atcagtaagg gaaattcaaa
     3841 attatcgggt attgtaaagg ttgcagatcg atatggtttt gagttagatg aagttatggt
     3901 attcggggat tctaataatg attttgaaat gttgaatgaa attcagcact cggtagcgat
     3961 gggaaatggg acgaaaaagg tgaaacaagc tgcttccttt gttacagata caaataatcg
     4021 tgatgggatt tataaggcat taattcattt tggtgtgatt gaggtataag atgtttcaga
     4081 gcaaggacga taattttaat agggtaaagg attttcattt tttaatggat ggtgaaaccc
     4141 aagaacttcc cagtgtgtat gatggacaga cggctttgca tcgcgctggt tttaaagtgg
     4201 aggagttggt agaatttcta catgcagctt cagaatctga agttgagttt catgatttta
     4261 ttcaacaact tcatcaggat ttagatactg ctgctgctaa ggtatctggc aagagaagtt
     4321 tcggggtttc gatgcaggat caggtagatg ctttgctgga tattctttat tttacatatg
     4381 gttcgtttgt tttgatgggg gttgatccag aaccaatttt tcagatagtc catactgcaa
     4441 atatggggaa aacatttcca gatgggaagg cccattttga tccgattacc cataaaattt
     4501 taaaacctga tgattgggaa gaacggtttg cgccggagga aaagattcag gaagagctga
     4561 aaagacagat gaaaagactt gattcgtaaa tcaag
//
LOCUS       DASFQS010000133         4553 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.137, whole genome shotgun sequence.
ACCESSION   DASFQS010000133 DASFQS010000000
VERSION     DASFQS010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4553
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.137"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..4181
                     /locus_tag="U1041_002057"
     CDS             <1..4181
                     /locus_tag="U1041_002057"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017180.1,HMM:NF019216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase M26"
                     /protein_id="HEM4769134.1"
                     /translation="QVGTKVKEIPTITITSIAEDENAKSAEASFELSDRTQSYISAVA
                     QLYQGDQLVREIPITDVTAPLALTGLDYYTDYSLKTIVTYNVGKGPETKLQESTQDFR
                     LDYKKIEIKDIDQVELYGLDNGHYRRQLSLTSESVNLDNYFVKIKSDRFKELLLPISK
                     IEEVEIDGQIKYKLTVETDELVQDTGKQYDKNYSFYVDQRVESQNGVYTSFKELLTAI
                     EANPAGTYTLGADMTADEVDLATDALSYVTSTFTGRLNGAHNGKSYAIYNLIQPLFNV
                     INNATIENVDLIDVAITSKTEKVGALAKTATGSQIRNVSVEGSLSAPTSIGGLVYLAN
                     GATKITNSSFKGQLVAIGTNSGGSNIGGIAGWAQDNHTTLSQVQADVAITLSAKNNNY
                     RAGALVGHIQNSARLQDGVAKGTIVNLTTAGQVGGVVGSTWSSGVVNNVVSTVQVTNG
                     DQVHGDTAFNTASITNTFVTGSASGAADKWSTQISETEAASKIAVMGITATVADSLNN
                     QAKNLYSVDYSLLDKATPERAIAYANMEKLLPFYNKEYIVYLANKIALTDKLAQTRLL
                     DVVPMVGNQIVTDPNSQKRAINRIMLHYADNTVAYLDVAFKEDFVNNHVSDYTIVGTD
                     LLYTPETFLSNYDGMVHRLTNDISSLVFNSDKVKAVLGIVEPTTPPTENELKNWASDL
                     GVPSTTEQKPLWALYLEDSFNSVRDHLAEDLRKVLASDKAINSLGASVENYLVQKISQ
                     NKEALVLGLAYLKRWYNIDFGDLNTRDLTIFKQDFFGNQATSTLDVIIALGNSGYDSL
                     RPKNNVQTYANSLQLAKGKATLFDYLSSYRQLFLPDKTNNEWLKDTSKAYIVEMASNV
                     EEAAKKQAQATPDSRYALGVYDRITKSNWAHQNMLLPLLTLPDESMYIISTMSTLSFG
                     AYDRYLYDSASNGMKFEDYMHQIVDRAAVWQRDHFDYWYSILSEESREKLFQSVLNYD
                     GFNFRDSASKATWKSLQNTERSSIANFFGPVGKWYAANGSGAYATGSLTHFVVDRMLD
                     QYGTSVFTHEMVHNFDGGIYFEGKGRRQGLGAELFALGLLQAPNGNQARSLGINTVYS
                     GNEDSMTRYHAANPAQRYKNVADLNTYVHNMFDVIYLLDYLEAKSVLKQSDTVKQKWY
                     RVIDNYYIKDKEKNTHAGNTIRQLTAEEAAKLNTINDLVDNSIINRREYWDTNTGLAR
                     NGYYTVSLFSPVYSALSNPNGSPGDFMFRRMAYELMAEKGYVEGFIPYVSNQLGKEAE
                     AAGEVVYDSWFGRNVGLITDDRVFKHIFKDEYADWATFKKAMYQNRINQLDKLVDFTM
                     TYELDKPNSTKQVTISSFADLEKLMDEAVAQDMKSIDIVLAHNESSWVNVLKQRIYNA
                     LLRNTDDFRTSIFK"
     gene            4405..>4553
                     /locus_tag="U1041_002058"
     CDS             4405..>4553
                     /locus_tag="U1041_002058"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769135.1"
                     /translation="MKRRFLISKFKHSTGVFELALPDFVKVTCFASIISHLAQSIDCA
                     SNLGDT"
BASE COUNT         1439 a          813 c          957 g         1344 t
ORIGIN      
        1 tccaagtcgg tactaaggta aaagaaatac caacaattac aatcacttct attgcagaag
       61 atgaaaatgc aaaatcggca gaggctagtt ttgaattatc agatagaact caatcttaca
      121 tttcagcggt tgctcagctc tatcagggag accagcttgt aagagaaatt ccaattacag
      181 atgtgactgc acctctcgca ttgacaggtt tggattacta tacagactat agtctaaaaa
      241 caattgttac ctataacgta ggcaagggac cagagacaaa actgcaagaa agtacacaag
      301 atttccgctt ggattataag aagattgaaa ttaaggatat cgaccaagtg gagttatatg
      361 gtcttgacaa tggtcattat cgccgtcaat tgtcattaac tagcgaatcg gtcaatttgg
      421 acaactactt tgtaaaaatc aaatcagatc gtttcaaaga attacttctt ccaatctcca
      481 aaattgaaga agtagagata gatggtcaaa tcaagtataa attgactgtt gaaactgatg
      541 aactggttca ggatacagga aaacaatacg ataaaaatta tagtttttat gtggaccagc
      601 gagtagaaag ccagaacggt gtatacactt ctttcaaaga attgttaaca gcaatagaag
      661 ccaacccagc aggaacctac acacttggtg cagatatgac tgctgacgaa gttgatttgg
      721 ctacagatgc actctcttat gtcacatcta cctttacagg tcgtttgaat ggtgctcata
      781 atggcaaatc gtacgctatc tataacctta ttcagccact atttaatgtc atcaataatg
      841 caactattga gaatgtagac ttgattgacg ttgcgattac ttctaagaca gaaaaagtcg
      901 gtgcacttgc taaaacagca actggaagtc agataaggaa cgtttcagta gaaggtagtc
      961 tttcagctcc tacaagtatc ggagggcttg tctatctcgc aaatggtgca actaagatta
     1021 cgaatagttc ctttaaaggt cagcttgtag caataggaac caattcaggt ggttcaaata
     1081 tcggaggaat tgcaggctgg gcacaggaca accatactac gctcagtcaa gtacaagctg
     1141 atgtagccat aactctctct gctaagaata ataactaccg agcaggagct ctagtaggac
     1201 acatccaaaa tagtgctcgt ttgcaagacg gagtagccaa gggaacaatt gtaaacttga
     1261 caacagctgg tcaggtcggc ggagtagttg gttcaacctg gagttctgga gttgtaaata
     1321 atgttgtcag cactgtgcag gtaaccaatg gtgatcaagt tcatggagat accgcattta
     1381 acaccgcctc tattacaaat acatttgtta ctggttcggc tagcggagct gcagataagt
     1441 ggagtactca aatttctgaa actgaagcgg caagtaaaat tgcagtcatg ggaattactg
     1501 ctacggtagc agatagtctg aataaccaag ctaagaattt gtatagtgtg gattatagct
     1561 tgctagataa agcaactcct gaacgtgcta tagcctatgc taacatggaa aaactgttac
     1621 cattctataa taaagaatat attgtttacc ttgcaaataa gattgctttg acagataaat
     1681 tagctcaaac gagattatta gatgttgttc caatggttgg caatcaaatt gtaacagatc
     1741 caaatagtca gaaacgcgct attaatcgta tcatgcttca ctacgctgac aatacggttg
     1801 cttatttgga tgttgctttc aaggaagatt ttgtaaataa ccatgtatct gattacacaa
     1861 ttgtaggaac ggatttactc tatactccag aaacattctt atcaaactac gacggaatgg
     1921 ttcatcgcct tacaaatgat atttcaagtt tggtatttaa ctcagataaa gtgaaagcgg
     1981 tgttgggaat tgtagagcct acgacaccac caacagaaaa cgagttgaag aactgggcat
     2041 cggatttggg agttccatca actactgaac aaaaaccatt gtgggcactg tatttggaag
     2101 atagtttcaa tagtgtacgt gatcatctcg cggaagattt acggaaagtg ttggcttctg
     2161 ataaagctat caatagccta ggtgcatcgg ttgagaatta tctagttcag aagatttctc
     2221 aaaataaaga agcattagtg ctgggtcttg catatctgaa acgttggtat aatattgatt
     2281 tcggcgattt aaatactcga gatttgacta tatttaaaca agacttcttt ggtaatcaag
     2341 cgacctctac attagatgtt attattgctt tggggaattc tggatatgac agtcttcgtc
     2401 caaagaataa cgttcagacc tatgctaact ctttacagtt agcaaaagga aaagctactt
     2461 tatttgacta cctatcaagc taccgtcaat tgttcttacc agataaaacc aataatgagt
     2521 ggttgaaaga tacaagtaag gcctatattg tggaaatggc ttcgaatgtt gaagaagctg
     2581 ctaagaagca agcacaagca acaccggata gtcgctatgc cttgggtgtg tatgaccgta
     2641 ttacgaagtc aaactgggct catcaaaaca tgctccttcc tcttctcact ctaccagatg
     2701 aaagcatgta tattatttct accatgtcaa ctctatcgtt cggtgcttac gaccgttact
     2761 tgtatgattc cgcttctaat ggtatgaaat ttgaggatta tatgcatcag attgttgaca
     2821 gagcagctgt ttggcaacga gatcattttg attattggta cagtattttg tctgaagaat
     2881 cacgtgaaaa actattccag tcagtcttga attatgatgg atttaatttc cgtgactcag
     2941 caagtaaggc tacttggaag agtcttcaaa atacggagcg ttcttctatt gctaacttct
     3001 ttggtccagt aggtaaatgg tatgcagcga atggatcagg tgcgtatgca acaggttctt
     3061 taacgcattt tgttgttgat agaatgctag accagtatgg tacttctgtc ttcactcacg
     3121 agatggttca taactttgat ggaggaattt atttcgaagg aaaaggtcgt cgtcaaggtt
     3181 taggggcaga attatttgct cttggtcttt tacaagctcc aaatggtaat caggcacgtt
     3241 cgttaggaat taatactgtt tactctggaa atgaagactc tatgacccgc tatcatgctg
     3301 ctaaccctgc acagcgttat aaaaatgtag cagatttgaa tacctatgtt cacaatatgt
     3361 ttgacgttat ctatttgcta gactatttag aagcgaagtc tgttttgaaa caaagtgata
     3421 cagtcaagca gaaatggtat agggttattg ataattacta tatcaaggat aaagaaaaga
     3481 acacgcatgc aggaaataca atccgtcaat tgacagctga ggaagctgca aaactgaata
     3541 ccatcaatga tttggttgac aacagcatta tcaaccgtcg cgaatattgg gacacgaata
     3601 ctggcttagc tcgtaatggt tattatacgg ttagtctctt ttctccagtt tattccgctt
     3661 tatctaatcc aaatggttct ccaggagact tcatgttccg tcggatggcc tatgaattga
     3721 tggcagaaaa aggttacgta gaaggcttca ttccttatgt atctaaccaa cttggtaaag
     3781 aagcggaagc agctggggaa gttgtgtatg atagttggtt tggacgaaat gttgggctca
     3841 tcacagatga cagagtcttt aaacatattt ttaaagatga gtatgctgat tgggcaacat
     3901 ttaagaaagc gatgtatcaa aatcgtatta atcaacttga caagttggtt gacttcacaa
     3961 tgacctacga attggataag ccaaactcaa cgaaacaagt tacgattagc tcttttgcag
     4021 atttagaaaa gcttatggat gaagctgtgg ctcaagatat gaagagcatt gatattgtac
     4081 ttgcacacaa tgagtcaagt tgggtcaatg tcctcaaaca acggatttat aatgctcttt
     4141 tgagaaatac ggatgatttc agaacttcta tttttaaata gtatgagaag aaggagcgaa
     4201 ctggttatat ggtaaatggt tccgccccta tcgttctagg actgtaaagt tatctgtaag
     4261 tcgttacttg caaaccaaga ctctagataa cagcatgctg tcaagtggat atatcgtcat
     4321 ttagtttttc ttttattact tcgacgactg aaaagctcca ttggaggttt tcagcctacc
     4381 acctgtcatt aaaagagtgg tagtttgaaa cgtcgtttcc ttatttccaa gttcaaacac
     4441 tccactggag tgtttgaact tgccttgcct gattttgtaa aagtgacttg ctttgcaagt
     4501 attatctccc accttgcaca gtccattgac tgtgcaagca atctggggga tac
//
LOCUS       DASFQS010000134         4528 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.138, whole genome shotgun sequence.
ACCESSION   DASFQS010000134 DASFQS010000000
VERSION     DASFQS010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4528
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.138"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            42..752
                     /locus_tag="U1041_002059"
     CDS             42..752
                     /locus_tag="U1041_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HEM4769136.1"
                     /translation="MNEIINVNVNDNQEPVVSGRQLHEALGVKTAYKDWFPRMTEYGF
                     VEGQDFCSNLSESTGGRRAVDHVIKLDMAKEIAMIQRTDRGKQVRQYFIQVEKDFNSP
                     EKIMARALLLADKKVHQLEAQIEADKPKVLFADAVSASHSSILVGDLAKLISQNGFKI
                     GANRLFAWLRENGYLIKRKGSDWNMPTQKSMELGLFEIKETTITHADGHISISKTVKV
                     TGKGQQYFINKFLADDVA"
     gene            1107..1364
                     /locus_tag="U1041_002060"
     CDS             1107..1364
                     /locus_tag="U1041_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769137.1"
                     /translation="MTEAIFTLGIFAVPMLAVGIVEQRKAEKKRMCEEFEEIRRRDYL
                     YGFKAGMGYQSTCDIEKARNGLKRDAQQVDREWKRYAEMVG"
     gene            1345..1539
                     /locus_tag="U1041_002061"
     CDS             1345..1539
                     /locus_tag="U1041_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769138.1"
                     /translation="MQKWLANFLKQEKPAIPRPLYTLEQENQLLHDMVREIAEQRNEY
                     RIENQRLRDENERLRRILEG"
     gene            1718..2488
                     /locus_tag="U1041_002062"
     CDS             1718..2488
                     /locus_tag="U1041_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011888683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiator protein A"
                     /protein_id="HEM4769139.1"
                     /translation="MRIDEVRNNQFYQFPQWLLEEPYNKLSHRAMLMYMLLWDRRGLS
                     EENGWYDKNGKVYVYFTNEQFMEILKCSKQTVVTTKEELHEFNLLKEVRQGVNKPNRL
                     YINGSLKTRLQEVQNLDEGSLKTRLQEVQNLDGINTNIIKTNISNINNNTSEQNPLKK
                     IVYTIRQNWGRDLTPIELETVTKMLGDYPFEIIDFAISEATLRNKKTIRWVERCCLDW
                     YVYNNLETITAIQDYLLAKKSWTRKEIDLPDPNYPPPY"
     gene            2501..3328
                     /locus_tag="U1041_002063"
     CDS             2501..3328
                     /locus_tag="U1041_002063"
                     /inference="COORDINATES: protein motif:HMM:NF013828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEM4769140.1"
                     /translation="MKIGEVHDVIDEMCLKHQVYLWRTKNKVMVKNETVPRYITCCPE
                     CTREKMNEQQLREVGQALEVEMWASSYDVFAKKSMIPKELKDASYKTYTITNRIEEEA
                     KQFALRLNEFYFKHQGKGNAIIQGKPGIGKSHLSISIARKLNMDWRSISEPKSVLFIS
                     VPKMFQRIQEGFGYKDGTSAQQMIDMLTKVDYLFLDDLGKESTFGRQAKEANDWKQNI
                     LYQILDERDTTIINTNLTGEQMQKVYDRSLVSRIMKGAMNNVFKYPDNAQSRRELPF"
     gene            3337..3498
                     /locus_tag="U1041_002064"
     CDS             3337..3498
                     /locus_tag="U1041_002064"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769141.1"
                     /translation="MQEKLKMIADHEEKYGQIGDEVRGLLLQQKHHIIQKKLDEWAGW
                     SEIGGKVEF"
     gene            3640..4116
                     /locus_tag="U1041_002065"
     CDS             3640..4116
                     /locus_tag="U1041_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HEM4769142.1"
                     /translation="MSYLFELEGIYAQLQAMELDDETFNDTLESIDFQEDLERNIEYF
                     VKLWKNALSDVERFKQAKQEFYEKEKNAKAKAEKYKETIERALKMSNKQKVDAGLFTV
                     SLRKSKQVDILDETKIPLEFMKIEYKPIKTELAKHLKAGEVIEGATLIEKESLQVR"
     gene            4116..4298
                     /locus_tag="U1041_002066"
     CDS             4116..4298
                     /locus_tag="U1041_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011054760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ERF family protein"
                     /protein_id="HEM4769143.1"
                     /translation="MRKSETIIELSKAFAKMQMELEQPLKNADNPFFKSKYVPLENVV
                     DSITRAANNDLCLYLS"
     gene            4273..>4528
                     /locus_tag="U1041_002067"
     CDS             4273..>4528
                     /locus_tag="U1041_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006151492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEM4769144.1"
                     /translation="MIYACTCPECEGQEEQFNNVTKPKHYQGKYGMEALDVVKNFIGN
                     LAGESAYYWGNVIKYLLRFQQKNGVEDLKKARQHLDWLIEE"
BASE COUNT         1548 a          745 c         1121 g         1114 t
ORIGIN      
        1 tttttattat agcaaacttt atcacattag aaaggaattt tatgaacgaa attatcaacg
       61 ttaatgtgaa cgacaatcaa gaacctgttg tgtctggtcg gcaactacat gaggctttgg
      121 gtgtcaagac ggcatataag gactggttcc ctagaatgac cgaatatgga tttgtcgaag
      181 gacaggactt ctgctcaaat ttgagcgaaa gtacgggagg tcgtcgagcg gttgaccacg
      241 tcatcaagct ggacatggcc aaggagattg ctatgatcca acggacagac cgtggcaagc
      301 aggttcgtca gtactttatc caggttgaaa aggacttcaa cagtccagag aagattatgg
      361 ctcgtgctct gctattggca gacaagaagg tgcatcagct ggaagcgcag attgaagcag
      421 acaagcccaa agtgttgttt gcagacgctg tgagtgctag tcactcatct atcttggttg
      481 gtgatttagc aaaactaatc agtcaaaacg gctttaaaat cggtgcaaat cgcttgtttg
      541 cgtggttgcg tgagaacggc tatctaatta agcgcaaggg cagtgattgg aacatgccaa
      601 cgcagaagtc tatggaacta ggtttatttg aaataaaaga gacaactatc acacatgctg
      661 acggtcatat ctcgattagc aaaactgtaa aagttacagg caaaggtcag cagtatttta
      721 tcaataaatt tttggctgat gatgttgctt gaaaaacaaa aaaaccactg cgggaacagt
      781 ggcttactaa aaaaatcact taaattataa cacacgaaag cgaggtttga caagatggat
      841 gacattgctg aaagcctcat atcacgattt atcagtcagc taaaagtcag actggtagag
      901 gttttcgagg tatttaacct agagcttgca atgcctttgc tactcaacag caagcagtgt
      961 aagaagttgc taggtattgc aaatgaaacg gaattccaga gggtgtcaca cttgaaggat
     1021 tttccaagga ttgaaaagaa gggatcacac ccacgatttc cacgggatgc cgtggttgag
     1081 tggatgaaag aaaattggag gttattatga cagaagcgat atttacatta ggaattttcg
     1141 ctgtgccgat gttggcagta ggcattgtgg agcaacggaa ggctgagaaa aagcggatgt
     1201 gtgaagaatt tgaagaaatt cggcgcagag actacctgta cggctttaaa gcaggtatgg
     1261 ggtatcagag tacctgcgac attgaaaaag ctcgtaacgg gctaaagaga gacgctcagc
     1321 aagtggatag ggagtggaaa agatatgcag aaatggttgg ctaatttttt aaaacaagaa
     1381 aaacctgcta tcccacgtcc gctttacaca ctagaacagg aaaatcaact attgcacgac
     1441 atggtccgtg aaattgctga acaacggaat gaataccgca tcgagaatca gcggttaagg
     1501 gatgagaatg aacggttgag gaggatttta gaaggatgac aagtctggtt agattggaat
     1561 taattgctca atcatatgac cgttttcttc gaacaggcga cactgaacat cttgaggatg
     1621 tagaaaggat tttggaatat gacgaacatg acagcgattg aaaccgcacg ggtacagcgt
     1681 gagattgatt tggaagagta ttgaaaggag gtatctgttg cgcattgacg aagttagaaa
     1741 taaccagttc tatcaattcc cgcaatggct actggaagag ccgtacaaca aattgagcca
     1801 cagagccatg cttatgtaca tgctgttgtg ggataggagg gggttgtctg aagagaatgg
     1861 ttggtacgat aaaaatggca aagtgtatgt ttattttacc aatgagcaat ttatggaaat
     1921 cttaaaatgc tctaagcaaa ccgttgtgac aaccaaggaa gaactacatg aattcaatct
     1981 actcaaggag gttagacaag gggtaaacaa gcctaatcgc ttgtatatca acggaagtct
     2041 aaaaactaga cttcaagaag tccaaaattt agacgaagga agtctaaaaa ctagacttca
     2101 agaagtccaa aatttagacg gaatcaatac taatattatc aagactaata tatctaatat
     2161 aaataataat actagcgagc aaaatccctt gaaaaaaatt gtctatacca ttagacaaaa
     2221 ttggggaaga gatttaacac caattgaact tgaaaccgta acgaagatgt tgggtgatta
     2281 cccgtttgag attattgact tcgctatctc agaagcgaca ttgcgaaaca agaagacaat
     2341 tcgctgggtg gagaggtgtt gtctagactg gtatgtctat aacaacttgg aaactatcac
     2401 ggcgatacaa gattatttac ttgctaagaa gagttggaca aggaaagaaa ttgacctacc
     2461 agacccaaac tatccaccgc cctattagaa agaggtgtaa atgaagattg gagaagtcca
     2521 tgatgtgata gacgagatgt gtttgaaaca ccaggtatac ctatggcgga cgaagaacaa
     2581 ggtcatggtc aagaatgaaa cagtgccacg ctacatcact tgttgccctg agtgcaccag
     2641 agagaagatg aacgagcaac agttgagaga agtgggccaa gccttggagg ttgagatgtg
     2701 ggctagctcg tatgatgtat tcgctaagaa gagcatgata ccgaaagagt tgaaagatgc
     2761 atcttacaag acctacacga ttactaacag aatcgaggaa gaagcgaaac aattcgcttt
     2821 gaggctgaac gagttttact tcaaacacca aggtaaaggg aacgctatta tccaaggaaa
     2881 gcctggtatc ggcaagagtc atttgtctat cagtattgct agaaagctga atatggactg
     2941 gcggtcaatc tctgaaccga agagcgtgct gtttatctcg gtgccgaaaa tgtttcaacg
     3001 aatccaagag gggtttggtt acaaagacgg gactagtgcc cagcagatga ttgatatgct
     3061 tacaaaagtc gactatctct ttctggatga ccttggtaag gaatcgacat ttggcagaca
     3121 agccaaggaa gcgaatgact ggaagcagaa tatcctttat cagattttgg atgaacgtga
     3181 tacaaccatc atcaacacca acttgacagg agaacagatg cagaaggtgt atgaccgctc
     3241 acttgttagc cgaattatga aaggtgcgat gaacaatgtt tttaagtatc cagataatgc
     3301 acagagtaga cgagaattac cgttttagga gggataatgc aagagaaatt aaaaatgatt
     3361 gctgaccacg aagaaaagta tggccagata ggcgatgagg tcagagggct gttattgcag
     3421 cagaagcatc atattatcca gaagaaactg gatgagtggg ctggttggtc tgagattggc
     3481 ggaaaggtgg agttttgatg tttgattacg atacatggtt aagcacaccg tcagaaccac
     3541 cagttgatat ctgggaaaca ggcgaagacg aggacagagc ctatgacgaa tggaaagacg
     3601 atttagcgat gggttatatg atttagcaag gagaaaataa tgagttatct ttttgaactt
     3661 gaaggaattt atgcgcaact gcaagcgatg gaattagacg atgaaacatt caatgacact
     3721 ttggagagca ttgacttcca agaagatttg gaacggaaca tcgaatactt tgtcaagttg
     3781 tggaagaatg cattgtcaga tgtggaacgt ttcaaacagg cgaaacagga attttacgaa
     3841 aaagaaaaaa atgccaaagc taaggcagaa aaatacaaag aaactattga acgagctttg
     3901 aagatgagca ataaacaaaa agtggatgct ggattattca ctgtctcgct ccgaaaatcg
     3961 aagcaagtgg atattttaga tgaaactaag ataccgcttg agtttatgaa aatagagtac
     4021 aaacctatta agactgaatt ggctaaacat ttaaaagctg gcgaagttat cgaaggtgcg
     4081 acattgattg aaaaagaaag tttacaggta cgatgatgag aaagtcagaa acgattattg
     4141 agttaagtaa agcatttgcg aagatgcaga tggagttgga acaaccgctg aagaatgctg
     4201 ataatccatt ttttaaaagc aagtatgtac cgcttgaaaa tgtagttgat agcattacac
     4261 gagcagcgaa caatgattta tgcttgtact tgtcctgaat gtgagggaca agaagaacaa
     4321 tttaacaacg taaccaaacc aaaacattac caaggtaagt atggtatgga agctttggat
     4381 gtggtcaaga attttatcgg caatctagcc ggcgaatctg cttactactg gggcaatgtc
     4441 atcaagtatc tgttgcgatt tcagcagaag aacggtgtcg aggacttgaa gaaagctaga
     4501 caacatttgg attggttgat tgaggaga
//
LOCUS       DASFQS010000135         4374 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.139, whole genome shotgun sequence.
ACCESSION   DASFQS010000135 DASFQS010000000
VERSION     DASFQS010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4374
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.139"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..368
                     /locus_tag="U1041_002068"
     CDS             <1..368
                     /locus_tag="U1041_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEM4769145.1"
                     /translation="TLRSGPGLFAQPHRGQGFVVLDFPCNQFLNQAPGSAEDINQTCS
                     LNYGTTFPRFAKIAVNGSEASPLYRYLKKEKSTLLGGRIEWNFTKFLVDRQGRVVKRY
                     LPTTSPLKLKEDIELYLEK"
     gene            complement(387..1388)
                     /locus_tag="U1041_002069"
     CDS             complement(387..1388)
                     /locus_tag="U1041_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM4769146.1"
                     /translation="MIRHHNYLKIFTFLLILLFIIFLLSLSIGYSNSSFSDLIDIMSG
                     QASSSTLLIIGRIRLPRIIASIIGGASLALAGLLLQTLTRNPLADSGILGINAGAGLV
                     VALFVGLSSKISPVLLSLMPLFAMMGGGLTIFLVYWIARKKLYGIHPARLIITGVGIS
                     SMLSGIMVSIISQLDDFKMEYIVQWLSGRVNGGDWKTIAIYTPLLLLVWMATFSRSRS
                     LNIMNLNDQTAMALGLHLQRERRITLVLATALASLSVILVGNITFVGLIAGHIVRKWL
                     GNDHRVIIPATIIIGSFILLLADTIGRVLLVGTGIPTGIIVSLIGAPYFLWLLKQEG"
     gene            complement(1385..2410)
                     /locus_tag="U1041_002070"
     CDS             complement(1385..2410)
                     /locus_tag="U1041_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM4769147.1"
                     /translation="MNKLVSSRYPKTKPKNIWLVFFIICLSFIAGVYLSLRFGAISYS
                     HQQLIETLKHPLTDSSAQDVIIDLRLPRMVAAILVGAAMAQAGAMMQGITRNPIADPG
                     LLGINAGAGLALIVAYALFGGLHYSQILLICLLGSCLAAGLVFGLAYQVQKGYNQLRL
                     ILSGAMVASLFSAIGQAITIYFDLSTAVIGWQAGGLVQVNWKMLAIIAPLIIIGLILA
                     QLFSHQLTILSLNETVAKNLGQRTLLMTLVLLGIVLLLSASAVALVGSLSFVGLIIPH
                     FIRMFTGKNYKLLLPLTAFAGASFLIWVDLVCRSINPPVETPISAVISIIGLPCFLWL
                     IRKEKHF"
     gene            complement(2424..3353)
                     /locus_tag="U1041_002071"
     CDS             complement(2424..3353)
                     /locus_tag="U1041_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4769148.1"
                     /translation="MKKFLAIFSLFVGLIFLTACSTSSSSTDVELSSMPKIEGITYHG
                     DIPKNPKKVVNFAYSYTGYLLQLGIDVSSYSLDLEKNSPVFGDKLKDVPQLTTADTEA
                     IAAQKPDVILVFSGDDNLETLKEIAPVIEITYGKSDYLKMLTDIGQIFGKEKEAQAWL
                     DQWDKKVATAKEELKGLIDTSSTFTVMDFFDKNIFLYGNNFGRGGELIYRALGFAAPA
                     KVQEDIINKEGWFGVSQESLPEYVGDYVLVNVNDKTKEAAASLKESDIWKNLPAVKNG
                     HVIEIDYNLFYFSDPMSLDLQIDAFVSEIQKLQ"
     gene            complement(3366..4151)
                     /locus_tag="U1041_002072"
     CDS             complement(3366..4151)
                     /locus_tag="U1041_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019774490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4769149.1"
                     /translation="MSSIQAENIQVSYDNRIIIDELSTSIPKGSITTIIGANGCGKST
                     LLKALTRIIPVQEGAIYLDGQAISQLPTKEVAKKLALLPQVLEATEGISVYELVSYGR
                     FPHQNGLGHLTDQDRDKINWALEVTQTAPYARLPVDDLSGGQRQRVWIAMALAQDTDT
                     IFLDEPTTYLDLNHQLEVLELLKELNQSRRKTIVMVLHDVNLSARFSDYMIAMKEGDI
                     RYHGSVSNMMTTEILRDIFSIEPQLMQVAGQDYPILLTYDFKK"
BASE COUNT         1360 a          890 c          913 g         1211 t
ORIGIN      
        1 aaacactgag aagtgggcca gggctttttg cccagcctca tcgaggccaa ggttttgtcg
       61 tgctagattt tccttgtaat caatttttaa atcaggctcc cggttctgcg gaagacatca
      121 atcagacctg tagcttgaat tatggtacaa cttttcctcg ttttgctaaa attgctgtga
      181 atggatctga agctagtccg ctatatcgct atcttaagaa agaaaaatcg accttattgg
      241 gaggtcgaat tgagtggaat tttaccaagt ttttagtgga tagacaaggg cgtgtggtca
      301 aacgatattt accaacaact agtccattaa aacttaaaga ggatattgaa ctttacctag
      361 aaaaataaca agaaggctgg agtcatctag ccttcttgct ttagtaacca cagaaaatag
      421 ggagcgccga taagtgagac gatgatgccg gttgggatgc ctgttccgac aagtagtacc
      481 cgtcctatgg tatccgctag aagtagaatg aagcttccta ttattatagt agctggaatg
      541 atgacacgat ggtcatttcc taaccatttg cgcacaatgt gaccagcaat gagaccaacg
      601 aaggtgatat taccaactaa aatgacacta agagaggcta gggcggtagc taataccaag
      661 gtaatccgcc tttcacgctg taagtggagt cccaaagcca tggctgtctg gtcgtttaga
      721 ttcataatat tgagtgagcg acttcgacta aacgttgcca tccacaccaa tagaagaaga
      781 ggagtataga ttgcgatagt tttccaatct ccaccattta ctcgaccgct gagccactgg
      841 acaatgtatt ccatcttaaa gtcatctaat tggctgatga tgctgaccat gataccagac
      901 agcatgctcg aaattccaac tcccgtgata attaagcgtg caggatggat gccgtacagc
      961 ttcttacgtg caatccagta aactagaaaa atggttaatc caccgcccat catagcaaat
     1021 agaggcatga gactcaataa gacagggctg atttttgaag agagaccgac aaatagtgcc
     1081 acaacaagac cagctcctgc gttgattcct aatattccag aatctgccag aggattgcgg
     1141 gtcaaagttt gtagcaacaa acccgccaaa gccagagaag cccctccgat aatggaggcg
     1201 attattctag gtaagcgaat tcgcccaatg atcagtagag tcgatgaact agcctgccca
     1261 ctcatgatgt cgatgagatc tgaaaaggat gaattgctat agccgataga taaggaaagt
     1321 aggaaaatga taaataaaag gattagcagg aatgtgaata tttttagata gttgtgatgt
     1381 cttatcaaaa gtgtttctcc tttctaatca accataggaa gcaagggaga ccaatgatac
     1441 tgatgactgc gctaatggga gtttcaacag gtggattgat agaacggcaa accaaatcta
     1501 cccagatgag gaaactagcc cctgcaaagg cagttaatgg caagagtagc ttgtaatttt
     1561 tccctgtaaa catgcggata aagtgaggaa taatgagccc gacaaaagaa agtgagccca
     1621 caagagctac cgcagaagct gagagtagaa ggacaattcc caacaaaacc aaggtcatca
     1681 gtaaggttcg ttgacctaga tttttagcaa cggtttcgtt gagactcagg atggtcagct
     1741 gatgcgaaaa gagttgagca aggatgaggc cgatgatgat aagaggagca atgatggcca
     1801 gcatcttcca gtttacctgt accaatcccc ctgcttgcca gccaatcact gcagttgata
     1861 aatcaaagta gatagtaata gcctgaccaa tagcagaaaa tagacttgct accatggcgc
     1921 cagataaaat taaacggagt tgattgtagc ctttttgcac ctgataagct agaccaaaga
     1981 ctagaccggc tgccagacag gagcccagta aacatattaa taaaatttga ctgtagtgca
     2041 aaccaccgaa tagagcatag gcaacaatga gagcaagtcc tgctccagca ttgattccta
     2101 ataagccagg atcggcaatc ggattgcgtg taattccttg catcattgcc ccagcttggg
     2161 ccatggcagc tcccaccaag atggcggcta ccattctagg caagcgcaaa tcgatgataa
     2221 catcctgagc ggaagaatct gtcagtggat gctttagggt ttctatcagt tgttggtggc
     2281 tataagaaat agctccaaag cgtaaactaa gatagactcc agctatgaaa gaaagacaga
     2341 tgatgaaaaa aacaagccaa atattctttg gctttgtttt gggataacga gaacttacta
     2401 gtttgttcat atatccagtc cttttactga agtttttgaa tttctgagac aaaggcgtca
     2461 atttgtaaat ctaaagacat cggatcggag aagtagaaga ggttatagtc tatctcgatg
     2521 acgtgaccat tctttacagc aggtagattt ttccaaatat cactttcttt gagagaggca
     2581 gctgcttctt ttgttttatc attgacgtta acaaggacat agtcgccaac atattctgga
     2641 agagattctt gagatacccc aaaccagcct tctttattga tgatgtcttc ttgaaccttt
     2701 gcaggagcgg caaaaccgag agcgcgatag attaattctc caccacgacc aaagttatta
     2761 ccataaagga agatgttctt atcgaagaag tccatgacgg taaatgttga acttgtatca
     2821 atcaatcctt tcaattcctc tttcgcagta gcaactttct tatcccattg atctaaccag
     2881 gcttgtgctt ccttttcttt tccaaaaatc tgaccaatat ctgtcagcat tttcaagtag
     2941 tcactctttc cataagtgat ttcaataact ggagcaattt ctttcagtgt ttctaagtta
     3001 tcatcaccag aaaatactag aatgacatct ggcttttgtg cggcaatcgc ttctgtatct
     3061 gccgttgtca attgtggaac atcctttagt ttgtctccaa agacgggact atttttctct
     3121 aaatctagac tatagctaga tacatcaatt cctaattgta agagatagcc tgtgtaagag
     3181 taagcaaagt tgacaacttt tttaggattt tttggaatgt caccgtggta agtaatgcct
     3241 tcaatctttg gcatgctaga cagttctacg tctgttgaag aggaagaggt agaacaagct
     3301 gttaagaaaa tcagcccgac aaataaacta aaaatagcta aaaacttttt cattttttct
     3361 ccttattatt ttttaaaatc gtaagttagc aaaatagggt aatcttgacc agcaacctgc
     3421 atcaattgag gttcaatgct aaaaatgtcc ctcagtatct cagttgtcat catattggac
     3481 acagaaccat ggtagcgaat atctccctct ttcatggcaa tcatataatc tgaaaatcga
     3541 gctgataaat tgacatcgtg aaggaccatc acaatggttt tccgtcggct ttgattcagt
     3601 tcttttaaaa gttctaagac ttccaattga tgattgagat caagataggt tgttggttca
     3661 tctaagaaaa tggtatccgt atcttgggca agtgccatcg caatccaaac ccgttgcctc
     3721 tgaccacctg ataaatcatc aactggtaac ctagcgtagg gagcggtctg ggtgacttcc
     3781 aaggcccagt tgattttatc tctatcctga tcagtgagat gccccagccc attttgatgc
     3841 ggaaagcgac cataggagac cagttcataa acggaaatcc cttctgtcgc ttctaagacc
     3901 tgagggagca gggccaattt ttttgcaact tctttggttg gtagttgtga aatggcttgt
     3961 ccatctaaat agatagcccc ttcttgaaca gggataatcc ttgtcaacgc tttaagcaag
     4021 gtcgattttc cacaaccatt ggcaccaatg attgtcgtta tacttccttt tggaatactt
     4081 gttgataatt catcaataat aatccgattg tcgtaagaga cttggatatt ttccgcttga
     4141 atcgaagaca caaactcctc cttaccagaa tatgattcat taataatttg ttccgaccag
     4201 tattatatca aaaaaaatta ccaaaacaaa gagttttctg aaaattttaa tttaatgaga
     4261 atcgttataa aaaagggagt gggaaagaac tcaaccaaaa taaaaagagt tcccctcact
     4321 tccaagcagt tggctcgggc taaaatagtc cactggacta ttttactccc accc
//
LOCUS       DASFQS010000136         4368 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.140, whole genome shotgun sequence.
ACCESSION   DASFQS010000136 DASFQS010000000
VERSION     DASFQS010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4368
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.140"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            154..>4368
                     /locus_tag="U1041_002073"
     CDS             154..>4368
                     /locus_tag="U1041_002073"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769150.1"
                     /translation="MSTSESEPLNANGTVNKSETIRIAAELEYTTLDNAIRNLRHALS
                     FPEIFEETGNEEKYGKYRQALSLARLALEQAIALREKDSVSQVELDAMALKAGQAAIS
                     LNGRIAQINPITAVEGTSTRATDTVRPEILKTNDLIIFNKRTITTPLVFGEVREASNP
                     SSWKDFGINYASNTYTADSIKGGNNILLDFPGLQVRHSLKTGTRDVYQITISGTATYK
                     QEVNGRTYFTRAPYIVDGAGNIPLFYVNGAWKESKIIIVEVEDGNHYINMNWGEAVTS
                     NKLTEKASLHTKAGNPWTDKNVLNNIVIRPTGQLPAVNESKNVAVDLSVNGQSNTATS
                     NIYVNYPPQITTASNMYVFKGESVNRQLIQITESGPANFGGTVKSATFNTDVQGLTIS
                     TTGLVQGTVHANATLGRYTRTVSATDNLNNTNTSNSFGIYYMDLTGGELTSEIGTKIT
                     NDQIRNLLLANLQSGGESVSSNVSFSIPEHEMSLGIQTINVVATGTNGNSKTVQVKLN
                     YRDTQAPTVTRTQSVIYVFDNVPIKLLNPNNPQAVSPVADKLKIATVTDVSGVATTAD
                     ILTAVEAENDNKKGLTVTVEGSTASPKEVFVSGQTAASFNLPSGFYNNFVKIADTQGN
                     ATTYQTESAKFKMHLLDTSVTPIVARDIDATGFTRVTAEDILNAVNVDYGAVTQDEQN
                     AVKVRKELLSNSDTGDRVTLGTKRATVRVYTASNTYKDVDVTFDYVDRTRPRITVKKD
                     VSVFANRPVELIEPNTAAPVIATDSSMPLTYSMPDASGVTVNSTTGKVQGTLSATGAG
                     YYTRAVTVLDAQNNSITSGDFWIRSLFINNMGSDGTITALEREYGLVPTADDIKNHVT
                     ITGVDNNGPTITKEVLGTIPKNVNGHVQVQLTTSEGVRTVVTVPINYTNQRPIINVPA
                     RKEILRKPVGQSTTIDLSEGVTVTDREDDRSPSDNLTTSVKYEIVDSTNQVVRTVGPS
                     TASKIVDLTDLPAGDYTVKISATDSGATTPVVATYSLRVNVDTTPPTVANAKSDIFVF
                     KGVAIDTNATVTGEQPLKWATISDDIAVTDIVGRNNLVGLSLDLNGNLTGISNSTAGY
                     YSRSLTVTDGTNSATAVSVRIFVLEPSGETTTRIHGHHVRTTDFANLVTLTSGSGYDS
                     NGFKAAAGLTFTPVDAQGNALTDNQLPKTGTGNQVRVRVTTSQGVVTYVTVTVNYDAN
                     TNPSLTVSDQTIDKGDVRGNSIDLSREVTVSDKEDDRDPNDNKTKRVTYEVRSADGAR
                     VIKAESEDVTLPLTTTAGTYKVIVKVTDSDGSVVTREYTLTITDRVSASISSSESAST
                     SASTSSSTSTSASASVSASTSSSTSTSESASTSASTSASTSSSESASVSASTSASTSS
                     SESASVSASTSASTSSSESASTSASTS"
BASE COUNT         1388 a          877 c          990 g         1113 t
ORIGIN      
        1 tctgttagtg cttcctcctc ggttagtggc agtgagtctg ctagtgtttc ctcctcggtt
       61 agtagcagtg agtctgttag tgcttcctcc tcagttagtg gcagtgagtc tgttagtgcg
      121 tcagagttgg tgagtacatc ggttagagaa tcattgtcaa caagcgaaag tgaaccgctg
      181 aacgcgaatg gaactgtgaa taaatcagaa accattcgta tcgcagcaga gttggaatac
      241 accacactgg acaatgccat ccgcaactta aggcacgccc tatctttccc agaaattttt
      301 gaagaaacag ggaatgaaga aaagtatgga aagtatcgac aagccttatc tcttgctaga
      361 cttgctttag aacaggccat cgcccttagg gaaaaagact cggtcagtca ggtagagtta
      421 gacgctatgg ccttaaaagc gggtcaagct gcgataagtt taaatggtcg aatagcccaa
      481 atcaatccga ttacggctgt agaggggaca agtactcgag caacggatac tgtaagaccg
      541 gagattctta aaacaaatga cctaataatc ttcaataaaa ggacgattac aactccatta
      601 gtttttggag aggttagaga agcaagcaat ccttcttcat ggaaagattt tggtattaac
      661 tatgcatcca atacctatac agctgatagt ataaagggag gaaataacat tcttttggac
      721 ttccctggtt tacaagtaag acatagtttg aaaacgggga cgagagatgt atatcagata
      781 acaatatctg gaactgctac ctataaacag gaagtaaatg gaagaacata ttttactcgt
      841 gctccgtata tcgtggatgg cgctgggaat ataccgctct tttatgtcaa tggagcatgg
      901 aaggaatcta aaatcatcat tgttgaagtg gaagatggga accattacat caatatgaat
      961 tggggagagg cagtaacctc taataaactg actgagaaag ctagcctgca tactaaagct
     1021 gggaaccctt ggactgataa aaacgtattg aacaatattg tgattcgtcc aacgggtcaa
     1081 cttccagcag tgaatgaatc caaaaacgtt gctgttgacc tttctgtaaa cggtcaatcg
     1141 aatacagcaa cctcaaatat ttatgttaat tatcctcctc aaataacaac tgcaagcaat
     1201 atgtatgtat ttaaggggga gagcgtaaat agacaactta ttcagataac agagagtgga
     1261 ccagcgaatt ttggaggaac tgtaaaaagt gctaccttta atacagatgt acaagggtta
     1321 actatatcga caactggttt ggtgcagggg acggttcatg caaatgcaac tcttggaaga
     1381 tatacacgta ctgtttcagc tacagacaac ctaaacaaca ctaatacatc aaattcattc
     1441 ggaatctatt atatggattt aactggcgga gagttaacgt ctgaaattgg tacaaaaatt
     1501 acaaacgatc aaattagaaa tttactcctt gctaatttac aatctggtgg agaaagtgta
     1561 tcaagcaacg taagctttag tatacctgag catgaaatga gtttaggaat acaaacaata
     1621 aatgttgtag caacaggtac aaacgggaac tcgaagaccg ttcaagtgaa gttgaattac
     1681 cgagacaccc aagcacctac cgttacaaga acccagtccg ttatttacgt atttgataat
     1741 gtaccaatta aactattgaa tccgaacaat cctcaagcgg tttctccagt tgccgataaa
     1801 ttaaaaattg caacggttac ggatgtgtct ggagtggcca cgactgcgga catactcacc
     1861 gctgtagaag ctgaaaatga caacaaaaaa ggtttgaccg ttacagttga aggaagtacg
     1921 gctagtccaa aagaagtctt tgtctcgggt caaaccgcag cctctttcaa tctgccatct
     1981 ggattttaca acaatttcgt taaaattgca gatacccaag gtaatgcgac tacctatcaa
     2041 acagaaagtg ccaaatttaa aatgcacttg ctggatacga gtgtcacgcc tattgtcgca
     2101 cgagatattg atgcgacagg tttcacacgt gtgacggcag aagatatact caatgcagtc
     2161 aatgtagact atggtgctgt cactcaagat gagcaaaatg cagtcaaagt tcgcaaggag
     2221 cttctgtcaa attcagatac aggagacagg gtaactcttg gtacaaaaag ggctacagtg
     2281 cgtgtctaca cagctagcaa cacctataaa gatgttgatg ttacgttcga ctatgtagat
     2341 agaactagac cacgtatcac cgtcaagaaa gatgtttctg tctttgctaa tcgacctgtt
     2401 gaattgatcg agccaaacac agcagctccc gtaatcgcaa ccgatagctc aatgccgttg
     2461 acctatagta tgccagatgc atcaggagtg acggtcaatt ctactacagg taaagtgcaa
     2521 ggaacgctta gtgctactgg tgctggatac tatacacgtg cggttacagt gctggatgct
     2581 caaaacaata gcataacatc aggtgatttt tggattcgat ccctgtttat caataatatg
     2641 gggagcgatg ggactattac agcccttgag cgtgagtatg gattggttcc gacagcagat
     2701 gatattaaaa accatgtcac aataacgggt gtagataaca atggtccaac gattaccaaa
     2761 gaagtattag gaactattcc gaaaaatgtt aatggacatg tacaagtcca gttaacaacg
     2821 agcgaagggg ttcgtactgt tgtgactgta ccaatcaatt acaccaacca acgtccgatt
     2881 attaacgtgc cagctagaaa agaaatcctt cgaaaaccag tggggcaatc gaccaccatt
     2941 gacttgtccg aaggtgtgac tgttacagat agagaagatg atcgttctcc atcagataac
     3001 ctgacgacat ctgtcaaata tgagattgta gatagtacca atcaagtagt gagaacggtt
     3061 gggcctagta cagcatcaaa aatagttgac cttacagatc ttcctgcagg ggattataca
     3121 gttaagattt ctgcgacaga ttctggagca acaacacctg tcgttgcaac ctattccctt
     3181 cgtgtaaatg tggatacaac accgccaacg gttgcgaatg cgaagtcaga catttttgtt
     3241 ttcaaaggag tagcaattga cacaaatgca actgtaacag gggaacaacc attgaaatgg
     3301 gcgactattt cggatgatat tgctgtgaca gacattgttg gaagaaacaa tttagttggt
     3361 ctctcgttgg acttgaacgg caatttaaca ggaataagta atagtactgc aggttactac
     3421 agtagaagtt tgactgttac ggatggtaca aacagtgcaa ctgctgtatc agtcagaatc
     3481 tttgtccttg agccaagtgg ggaaacaacg acacggattc atgggcacca tgtgcgtaca
     3541 acggattttg ccaatcttgt gacattgaca tctggttctg ggtatgatag caatgggttc
     3601 aaagcagctg ctggcttgac atttacacca gtagatgcac aaggaaatgc tctaacagat
     3661 aatcaattac caaaaacagg gacaggaaat caagttcgtg tacgagtgac gacaagtcag
     3721 ggggttgtga cctatgtaac ggtaactgtt aattatgatg caaacacaaa tccaagtcta
     3781 acggtgagcg atcagacgat agacaaggga gatgtgagag gaaattctat cgatttatca
     3841 agagaagtta cggtttctga taaagaagat gatcgtgatc cgaatgataa caaaaccaaa
     3901 cgtgttactt atgaagttcg ttctgcagat ggggcgaggg ttattaaggc ggaaagcgag
     3961 gatgtgacac ttccgcttac aactacggcc ggaacctaca aagtcattgt caaagttacg
     4021 gacagtgatg gtagcgttgt gacaagagag tacacattga ctatcacaga tcgtgtgtct
     4081 gcgagtatct cctcctctga gtccgcgtca accagcgcgt ctacctcatc aagtacctca
     4141 acgagtgcgt ccgcatcagt cagcgcgtcc acctcatcaa gtacctcaac gagtgagtct
     4201 gcgtcaacca gcgcgtctac ctcagcaagt acttcatcgt ctgagtccgc gtcagtaagc
     4261 gcatctactt cagcaagtac ttcatcgtct gagtccgcgt cagtaagcgc gtctacttca
     4321 gcaagtacct catctagtga gtctgcgtca accagcgcgt ctacctca
//
LOCUS       DASFQS010000137         4292 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.141, whole genome shotgun sequence.
ACCESSION   DASFQS010000137 DASFQS010000000
VERSION     DASFQS010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4292
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.141"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            152..991
                     /locus_tag="U1041_002074"
     CDS             152..991
                     /locus_tag="U1041_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM4769151.1"
                     /translation="MIIKRVLNHNAVIAQNNKNVDILLFGKGIAFGKKVGDAIPPSSI
                     EKSFLLKNSDNMNRFTELFIDVPIELVYVCEKIINLGKITLGNHFDEIIYINLTDHIN
                     SSIERHKEGVVVTNPLRWEIAKYYKEEFELGKKALSIIKKDLHVELPVDEAAFIALHF
                     VNANLENIFQESYRITGIIMKIEQIIQDYYSTEFNQDSIDYYRFITHVKLFAHRLVEG
                     NEYHDEDDMDLLELMKKKYPREYQCGTRVADFIRLEYDYLLSPSELVYLIAHIRRLTK
                     NLS"
     gene            1002..2843
                     /locus_tag="U1041_002075"
     CDS             1002..2843
                     /locus_tag="U1041_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM4769152.1"
                     /translation="MKYKNTALAILEAVGGEKNVLRATHCVTRLRLELKDENIVSDER
                     VKSISGVLGIMKKNGQYQIILGNDVANYYKEFTALGKFDSDSVQQVKKANVLEQVIEY
                     IAGSMTPLIPAMLGGGMIKVLVIVLPMLGLLKADSQSISFLAFFGDAPYHFMPIFLAY
                     SASQKLKVTPTLAMSVAGILLHPNFVQMVSTGDPLHFLGAPVTPASYGSSVIPILIMV
                     WLMKYIEAVFNKVTPAVTKSFLQPTLVLLVSGFIALVLVGPLGVIVGEGLSQLVEQMH
                     GVAGWLTLAVLGAIMPFIVMTGMHWAFAPIFLAASIATPDVLILPAMLGSNLAQGAAS
                     MAVAFKSKNSNTKQIAFAAGFSALFAGVTEPALYGVTLKYKKPLYAAMIGGGLAGLFV
                     GLTGVKAYLFAVPSLIALPQFIYSEAASNITNAMIAAAISIIITFILAYFLGIDEETS
                     TVNLEKVAPGISSRKNVFSPLSGQILPLEKVNDATFSKKMLGDGVAIIPKDGKVYAPF
                     DGAVTSLFPTKHAIGLTSDEGVELLIHFGLETVELKGRGFVSHVSDGEKVEKGQLMLE
                     VDVEMLVAEGYDIVTPVVVTNTQEYLDVLLLSTKEEVNYADDLLAVL"
     gene            2858..4282
                     /locus_tag="U1041_002076"
     CDS             2858..4282
                     /locus_tag="U1041_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM4769153.1"
                     /translation="MSIFPDNFLWGGAVAANQVEGAYNEGGKGLSVQDVLPNGGLGEA
                     TQEPMEDNLKLQAIDFYHRYKEDIALFSELGFKVFRTSIAWSRIFPNGDEEFPNEEGL
                     QFYDELFDELLKNGIEPLVTLSHYETPLYLARKYHGWVDRKMIHFFEKFARTVFERYK
                     DKVKYWLTFNEVNSILELPFTSGGIDLPNEELSKQDLYQAIHHELVASSLVTKIAHEI
                     IPDCKVGCMVLAMPTYPMTPNPEDVWAAHAYENLNYLFSDIHVRGYYPNYAKRYFKEN
                     GIKITFMEGDEELLKNNTVDFLSFSYYMSITQAADPSKYSSGKGNILGGLVNPYLEAS
                     DWGWQIDPIGLRLTLNRYYDRYQIPLFIVENGLGAKDQLVKDEAGGLTVHDDYRIQYM
                     QEHLLQVAEAIQDGVEVMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGSGSLTRY
                     RKKSFYWYKEVIQSNGSILGNSSK"
BASE COUNT         1339 a          674 c          884 g         1395 t
ORIGIN      
        1 taaatttttt aagctagaag taccaactaa taattgaaat aaaaggatgt tatcgcttta
       61 aggcgagcag gaacctattt aaatgaatcg atacgatata tgtcgatttc ttttaagtag
      121 gttcttttat tttaagttta aaggaaaatt tatgatcata aagcgtgtat taaatcataa
      181 tgcagtcata gcacaaaata ataagaacgt tgatatcttg ttgtttggta aaggaattgc
      241 atttggaaag aaggtcggag atgcgatccc accttcttcg atagaaaaaa gttttttgct
      301 caagaatagc gataatatga atcgctttac ggaactattt atcgatgttc ctattgaatt
      361 ggtttatgtt tgtgagaaaa taataaattt aggcaagata acacttggaa atcattttga
      421 tgagattatt tacatcaatt tgacagatca tatcaattct agtatagaaa gacataagga
      481 aggagtagtc gttacgaacc ctcttagatg ggaaattgcc aaatattata aagaggagtt
      541 tgaactgggg aaaaaagcat tatccatcat aaaaaaagat ttacatgtcg aactcccagt
      601 tgatgaagca gccttcatcg ctttgcattt tgtcaatgcg aatttggaaa atatttttca
      661 agaatcttat cgtattactg gaattatcat gaagattgaa caaattattc aagactatta
      721 ttctacagaa ttcaatcaag attctattga ttactaccga ttcatcacac atgttaaatt
      781 gtttgctcat cgtttggtag aggggaatga ataccatgat gaagatgata tggatctttt
      841 agagttaatg aaaaagaagt atccaagaga gtaccaatgt ggaactcgag tagcggactt
      901 tattcggtta gaatatgatt atctactgag tccaagtgaa ttagtctatt taattgctca
      961 cattcggcgt ttaacaaaaa atttatcata aggagtctat tatgaagtac aagaatactg
     1021 cattggcaat cctagaggca gtcggaggag aaaagaatgt tcttcgtgca acccattgcg
     1081 ttactagatt gcgactggaa ttgaaagatg agaatatcgt gtccgatgaa cgtgttaaat
     1141 ccatttctgg agtactcggt attatgaaga aaaatggaca gtatcaaatt atcttaggta
     1201 atgatgtagc taattactat aaagaattta ctgcattagg aaaatttgat tctgattcag
     1261 ttcaacaggt taaaaaagca aatgtcttag aacaagtcat cgagtatatc gctggctcta
     1321 tgacaccact tattccagct atgcttggtg gaggtatgat aaaagttcta gtcattgtct
     1381 taccgatgct ggggctttta aaagcggatt cccaatctat ttcattttta gccttttttg
     1441 gagatgcacc atatcacttt atgccgattt ttttggccta ctcagcttca caaaaactta
     1501 aagttacacc tactttagcc atgtcggttg ctggtatttt gctacatcct aattttgttc
     1561 aaatggtatc tacaggtgat ccacttcatt ttttaggtgc ccctgttaca cctgctagct
     1621 atggttcatc agttattcca attcttatta tggtttggtt aatgaagtat attgaagctg
     1681 tttttaacaa ggtcactcca gctgtaacga aaagtttctt acagccaacc ttggtcctgc
     1741 ttgtttcagg tttcatagct ttagttcttg ttggacctct cggcgttatt gttggtgaag
     1801 gattatcgca attggttgaa caaatgcatg gtgtagctgg ttggttaact ttagcagttc
     1861 ttggagcaat catgccattt atcgttatga ccggtatgca ctgggctttt gcaccgattt
     1921 tcttggcagc ttcaatcgcg acacctgatg tactgattct accagcgatg ttaggttcta
     1981 acttggcaca aggtgccgct tctatggcag ttgcatttaa gagtaaaaat agtaacacga
     2041 aacaaatagc ctttgcagct ggattttcag ctttatttgc tggtgtcact gagcctgctt
     2101 tatatggtgt tactctaaag tataaaaaac cattgtatgc agcaatgatt ggtggtggtc
     2161 tagcaggatt atttgttggt ttaacaggcg taaaagcata cctttttgca gtaccttctc
     2221 tcattgcttt gccacaattt atttactctg aagcagcttc aaacattact aacgctatga
     2281 ttgctgcggc aatttcaatt attatcacat ttattttggc ctatttccta ggtatcgatg
     2341 aagaaacgtc aacagttaat ttagaaaaag tagcacctgg catttcaagt agaaaaaatg
     2401 tcttctctcc tctttcaggt caaattctcc ctttagaaaa agtaaatgat gcaacgtttt
     2461 caaaaaaaat gcttggagac ggagttgcaa ttatccctaa ggatggaaaa gtctatgctc
     2521 catttgacgg ggctgttacc agtctttttc caacaaaaca tgcaatcggt ttaacaagtg
     2581 atgaaggggt agagttgctt atccactttg gattagaaac tgtcgagcta aaaggaagag
     2641 gttttgtaag tcatgtttca gatggagaaa aagttgaaaa gggtcaactg atgctagaag
     2701 tggatgtaga aatgcttgtc gcagaagggt acgatatagt gactcctgta gttgttacaa
     2761 atacacagga atatctggat gttctcttgc tttcgacaaa agaggaagtc aactatgctg
     2821 atgatttatt agcagtctta taattcgagg agggtatatg tcaatttttc cagacaattt
     2881 cttatgggga ggagcagtag ctgcaaacca agtagaaggt gcatataatg agggaggaaa
     2941 aggattatcc gttcaagatg ttcttcccaa tggtggactg ggtgaagcta cccaagaacc
     3001 aatggaagat aatttgaaat tacaagctat tgatttttac catcgataca aggaagatat
     3061 agccctgttt tcagagttgg gatttaaggt atttagaaca tcaattgctt ggagtagaat
     3121 atttccgaat ggcgatgaag aatttccaaa tgaagaaggg ctacagtttt atgatgaact
     3181 ttttgatgaa cttctaaaga atggtataga gcctcttgta actctttctc actatgaaac
     3241 tcccctgtat ctggcaagga aatatcatgg ctgggtggat agaaaaatga ttcacttctt
     3301 tgaaaaattt gctcgtacag tttttgagcg atacaaagat aaggttaagt actggttgac
     3361 atttaacgag gtcaattcta tcttagaact gccttttaca agtggtggaa ttgacttgcc
     3421 gaatgaagaa ctttcaaaac aagatttata tcaggccatt caccatgaac ttgtagcttc
     3481 tagtcttgtt accaaaattg ctcatgaaat tattcctgac tgtaaggttg gctgtatggt
     3541 cttagctatg ccgacctatc caatgacacc caatcctgaa gatgtttggg cggctcatgc
     3601 ctatgaaaat ttgaactatt tattttcgga tatacatgtt agaggatatt atcctaatta
     3661 tgccaaaaga tactttaaag aaaatggcat aaagattact ttcatggaag gtgatgaaga
     3721 gttattgaaa aataatacgg ttgattttct ctccttcagt tattatatga gtattactca
     3781 ggcagcagat ccatcaaaat attcatctgg aaaaggaaat atcttgggtg gtttggtcaa
     3841 tccttattta gaagcttctg attggggttg gcagattgat ccaattggtt taagattgac
     3901 actaaatcgt tattatgatc gataccagat tcctttattc attgttgaaa atggtttggg
     3961 agctaaagat cagctagtga aggatgaggc tggtggtttg actgttcatg acgattatcg
     4021 aattcaatac atgcaagaac accttttaca agttgcggaa gcgatacagg atggcgtaga
     4081 agtcatgggt tatacttctt ggggctgtat tgattgtgta tctatgtcta ccgcacaatt
     4141 atctaaaaga tatggactaa tttatgttga tagaaatgat gatggaagtg gcagtctaac
     4201 tagatataga aagaaatcat tttactggta taaagaagtt attcaatcca atggcagtat
     4261 cctgggcaat agctcaaaat agactcttaa ga
//
LOCUS       DASFQS010000138         4235 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.142, whole genome shotgun sequence.
ACCESSION   DASFQS010000138 DASFQS010000000
VERSION     DASFQS010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4235
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.142"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(37..372)
                     /locus_tag="U1041_002077"
     CDS             complement(37..372)
                     /locus_tag="U1041_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEM4769154.1"
                     /translation="MKLRNIILAVSAATASFLAVTHRDKIAKEVQETKQLLSDIQLSK
                     DNIQEQLAVIQSFQEPLQEMASDLQYKTRVYQQSIAGNLEEIQQILKKYQNENSTRLG
                     KKPSTASQS"
     gene            complement(374..787)
                     /locus_tag="U1041_002078"
     CDS             complement(374..787)
                     /locus_tag="U1041_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEM4769155.1"
                     /translation="MSDCIFCKIISGEIPASKVYEDDQVLAFLDITQVTKGHTLVVPK
                     KHYRNVLDMDKEAAATLFSVVPTIARQLKEKLGASGLNIVNNNEEAAGQTVFHTHIHL
                     LPRFNNQDGLSIQFKANDPDFPALAQLAQDLYLGE"
     gene            850..1584
                     /locus_tag="U1041_002079"
     CDS             850..1584
                     /locus_tag="U1041_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4769156.1"
                     /translation="MLEVKNVTGGYVNIPVLKDVSFTVENGQLVGLIGLNGAGKSTTI
                     KEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIPETPSLYEELTLKEHLEVVAMAY
                     DLSWEQAWGRIEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
                     LGLDPVAISDLIALLEAEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEE
                     LQSAFGMDGASLNEIYLALTQEGVVG"
     gene            1581..2621
                     /locus_tag="U1041_002080"
     CDS             1581..2621
                     /locus_tag="U1041_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4769157.1"
                     /translation="MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYR
                     QLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEEADQIFLLTKEKDILQGLEGAAR
                     RTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
                     LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYL
                     RAFLRSGDYLGLTIRLLLLAILSLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQ
                     YITQLYPLEKDSKKIGLQNLLRVILYSLLLVESGFALLFSKENAMVVVLLLVGIFLHE
                     IYLPLKLKKLID"
     gene            2671..3465
                     /locus_tag="U1041_002081"
     CDS             2671..3465
                     /locus_tag="U1041_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEM4769158.1"
                     /translation="MQFDTSGLQLQSIAGNSGKAFKGLRSDGTPVFVKYEMPPIVSAL
                     AREQITPPVLSANREVGMGHRVEQEWLNGRTLERQDMTSKQIRQILVRMHYSRILLNQ
                     ALQMNYTYMEPQDLVYRWQKEAPTRLGQNSYLQSICQDLLNNLPRFRQEVATFVHGDL
                     HHSNWVETTSGLVYLTDWETACVTDRMLDVAYILTHYIPRQSWEEWLRAYGYKYNSTV
                     LNKVYWYGQLGYLNQIAKHVESYNVLAANKEIYALRQFRQSFYKEV"
     gene            3462..4100
                     /gene="trmB"
                     /locus_tag="U1041_002082"
     CDS             3462..4100
                     /gene="trmB"
                     /locus_tag="U1041_002082"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001239380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEM4769159.1"
                     /translation="MRVRNRKGASELLANNPQYVISNPEECMGKWAEIFGNNNPIHIE
                     VGSGKGRFVTGMATQNPDINYIGIDIQMTVLSYALDRVLEAGLPNIKLLQVDGSSLTN
                     YFAPAEIDQLYLNFSDPWPKKRHEKRRLTYKSFLDTYKEILPEKGEIHFKTDNRGLFE
                     YSLASFSQYGMVLKQVWLDLHADVLEGNVMTEYEEKFSNKGQVIYRVEAQFQ"
BASE COUNT         1162 a          730 c          978 g         1365 t
ORIGIN      
        1 ttaaacccaa tcaaccactg cgctgagacg ttgatactaa ctttgagaag cagtgctggg
       61 ctttttgcct agtcttgtgc tattctcatt ctggtatttt ttgagaatct gttggatttc
      121 ttccaagttt cctgcaatac tttgctgata gactcgagtc ttatattgta agtcagaagc
      181 catttcctgc aagggttctt gaaaactttg gataacggca agttgttcct gaatattgtc
      241 cttgctcagt tgaatatctg atagaagttg tttggtttcc tgtacttctt tagcgatttt
      301 atcccgatgc gtgactgcaa ggaagctggc ggtagcggcg cttacggcta aaatgatatt
      361 acgaagtttc atattattct cctagataga gatcttgtgc cagttgagcc agggctggga
      421 agtcagggtc gttggcttta aattgaatgc tcaatccatc ttgattgtta aagcgtggta
      481 agagatggat gtgtgtatga aagacggttt gcccagcggc ctcctcgtta ttattaacga
      541 tgtttagacc actagctcca agtttttctt ttaactgacg agcgatggtt ggcacaacag
      601 aaaagagtgt ggctgcagct tctttatcca tatcaagcac gtttcggtag tgttttttag
      661 gaacaaccaa tgtgtgtcct tttgtgacct gagtgatgtc taaaaaggct aatacttggt
      721 catcttcgta gacttttgaa gctggtattt ctccagagat aattttgcaa aaaatacaat
      781 ccgacataat ggcaacctct ttctaggatt tttgttataa taattatatc aaattgtagg
      841 aagaaatgta tgttagaagt aaaaaatgta actggaggat atgtcaatat cccagttttg
      901 aaagatgtat cttttaccgt tgagaatggt caattagttg gtctaattgg tttaaatggt
      961 gcagggaaat caacgactat taaggaaatt atcggtcttt tgacccccta tcaaggacag
     1021 attgcaattg acggcctaac tttgctacaa ggggctgaaa actatcggaa gaagattgga
     1081 tttatccctg aaacaccaag tttgtatgaa gaactaaccc tcaaagagca cttggaagtg
     1141 gtagcaatgg cctatgattt atcttgggag caagcttggg gacgtattga gcacttgtta
     1201 aaactgtttc gcttggatga gaaattggac tggtttcctg tcaatttttc aaagggaatg
     1261 aagcagaagg tcatgattat ttgtgctttt atggtggagc cgagtctatt gattgttgat
     1321 gagccttttc tgggattaga ccctgtggct atctctgatt taatcgctct tttggaggca
     1381 gaaaaatcta agggcacttc cattctcatg tccactcacg ttcttgactc agctgagaaa
     1441 atgtgcgact cttttgtgat tttacatcag ggacaggttc gtgcaactgg aaatttggag
     1501 gagctacaaa gcgcatttgg tatggatggt gcaagtctga atgaaattta tctggccttg
     1561 acgcaagaag gagtggttgg atgaaagaat tgtttcaaca acgccgacta gattttttaa
     1621 atcgttgttc caagtatctg cgctatgttc tgaatgacca ttttgttttg gttctcatgg
     1681 ttttactagg ctttttgagt ttgcaatacc gtcaattatt gttgtcattc cctgagaatc
     1741 cgttgccgat tgtttttgtg gttattgcaa tcagtctact ggtactagtg tccggaagaa
     1801 ttgcgactta tctagaagaa gctgatcaaa tcttcctatt gaccaaggaa aaagacattc
     1861 tgcaaggact cgagggtgca gccagacgca cggtcttgtt ttggtcctct atacaggtgg
     1921 tggttcagct tgttttgtta ccaatctatt tgaaactggg tttaccggtg tggatgattg
     1981 tagctggtct tcttactttg ttggttttaa aatgtctttt tgtcaagcgc caattagtgg
     2041 cttatcagtc acagggagta ttggactggt ctaaggctat tcaagatgaa caaaaaagga
     2101 aacagtctat tttacgtttc tttgccttat ttacgacggt taaaggaatc agtacgactg
     2161 ttaaaccgag aagctatctc aatggaatct tgcgtcttgt caagtcgaga cagacttggt
     2221 tttatctcta cttacgggct ttcttgcgtt caggagacta cttgggcttg acgatacgtc
     2281 tactgttgtt ggcgattttg tccctatttg ccattgaaga atcgtggtta tccatcggcc
     2341 tagttttagt ctttcattat ttgcttgtct tccagttgtt ggggctttac aagcattatg
     2401 attatcaata tataacacaa ctgtatcctt tggagaaaga ttccaagaaa atcggtcttc
     2461 agaatttgct tagagtgatt ttatatagtc tattactggt ggaatcgggc tttgctctgc
     2521 tattttctaa agagaatgcg atggtagtcg tcttacttct cgtggggatt ttcttgcatg
     2581 aaatatattt gcctctaaaa ttaaaaaaat tgattgacta aatagacgaa aattagtaaa
     2641 atagtaagga atttttaaag gaggaaaggc atgcagtttg ataccagtgg gctacaatta
     2701 cagtctattg caggaaatag tggcaaagcg tttaaaggcc tacggtcaga cggaacgcca
     2761 gtctttgtga agtatgagat gcctccgata gtgtctgctc ttgcgcgtga gcaaattaca
     2821 ccacccgttt tgtcagcaaa tcgtgaagta ggaatggggc atcgtgtaga gcaggagtgg
     2881 ttgaatggtc gtactttgga gcgtcaggat atgactagta aacagattcg tcaaatactg
     2941 gtgagaatgc actattctcg cattttgctc aatcaggctt tgcagatgaa ttatacctat
     3001 atggaacctc aggatttggt ttatcgttgg caaaaagagg cgccaactag attgggacag
     3061 aattcttatc tgcaatctat ctgtcaagat ttattgaata atctaccaag attccgtcaa
     3121 gaggtggcaa catttgttca cggagatttg catcatagta actgggtaga aacgacgtct
     3181 ggtttggtgt atttgacaga ttgggagacc gcttgtgtaa cggatcggat gttggatgtt
     3241 gcctatattt tgacgcatta tattcctcgt cagtcctggg aagagtggct tcgggcttat
     3301 ggctacaaat ataacagcac agtattaaat aaggtttatt ggtatggcca gcttggctat
     3361 ctaaaccaaa tagctaagca tgtagaaagc tacaatgttt tggctgcaaa taaagaaatt
     3421 tatgctctac ggcaattccg tcagagtttc tataaggaag tatgagagtt agaaatcgta
     3481 agggagcgag tgagcttcta gcaaacaatc cccagtatgt tatctccaat ccagaggagt
     3541 gtatggggaa atgggcagag atttttggaa acaataatcc tatccacata gaagttggtt
     3601 ctggtaaagg tcgctttgtc acaggtatgg ctacgcaaaa tccagatatt aactatattg
     3661 gtattgatat tcaaatgacc gtgttaagct atgccttgga ccgtgtgctt gaagctggct
     3721 taccaaatat aaaattattg caggtggatg gttcgagttt gaccaactat tttgcaccgg
     3781 cagaaataga tcagctttat ctgaattttt cagatccatg gcctaagaaa cgtcatgaga
     3841 aacgccgttt gacctacaag tcattcttag atacctacaa ggaaatccta cctgagaagg
     3901 gagaaatcca cttcaaaaca gataatcgtg gtctgtttga gtatagcctg gctagttttt
     3961 ctcaatatgg catggtcttg aagcaagttt ggctagattt gcatgctgat gttttggaag
     4021 gcaacgttat gacagagtat gaggagaaat tctcaaacaa gggtcaagtc atctatcgtg
     4081 tggaagcaca gtttcaataa ttcccttagt ggaaaatgag gagaggtcta acagaggcct
     4141 ttttcctttg gcgaataaac tatagtcatt cagtttttct tttattactt cgatgtaaga
     4201 ggaaactccg tttccttatt tccaacttca aacac
//
LOCUS       DASFQS010000139         4215 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.143, whole genome shotgun sequence.
ACCESSION   DASFQS010000139 DASFQS010000000
VERSION     DASFQS010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4215
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.143"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            158..1195
                     /locus_tag="U1041_002083"
     CDS             158..1195
                     /locus_tag="U1041_002083"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEM4769160.1"
                     /translation="MKEEDLLFTPISEKIDINQVREHSKLSPETLTKKQARDRELEAI
                     LKGEDDRLLLVIGPCSSDNEEAVLDYAHRLAKLQEEVKDKIFMVMRVYTAKPRTNGDG
                     YKGLMHQPDTDAAPSLINGIKAVRNLHYRVITETGLTTADEMLYPENLPLVDDLVSYI
                     AIGARSVENQQHRFVASGIDVPTGLKNPTSGNLKVMFNGLFAAQKKQSFLFNNTEVET
                     SGNPLAHVILRGAVNENGKYLPNYYYDNLLETIDLYDQFGLKNPFIIIDTNHDNSGKN
                     YLEQIRIVRQTLINRDWNEAIRNYVRGFMIESYIEDGRQDNPDVYGKSITDPCLGWEK
                     TQELIREIYNR"
     gene            1205..2230
                     /locus_tag="U1041_002084"
     CDS             1205..2230
                     /locus_tag="U1041_002084"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019785454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEM4769161.1"
                     /translation="MGIHKRSTSLDIDKVKELSKLEGEFLAAKNQRDEELKRIIRGED
                     DRLLLVIGPCSSDNEEAVLEYARRLSKLQDEVKDKIFMVMRVYTAKPRTNGEGYKGLV
                     HQPDTSKLPDLINGIAAVRNLHYRVITETGLTTADEMLYSANYPLVEDLVSYHAIGAR
                     SVEDQEHRFVASGVDMPTGMKNPTSGNLTVMFNGIYAAQNKQNFIYRDAEVDTDGNPL
                     AHAILRGANTEKGGYEPNYYYDILLKTIKQYEQFGLKNPFIVIDTNHDNSGKNYLEQI
                     RIVRQTLINRAWNESIRKYVRGFMIESYLEDGRQDSPEVFGKSITDPCLGWEKTEALI
                     REIYQTL"
     gene            2273..3142
                     /locus_tag="U1041_002085"
     CDS             2273..3142
                     /locus_tag="U1041_002085"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEM4769162.1"
                     /translation="MTIDGYTRLAAVVAKPIKHSISPFIHNLAFQDTGVNGVYVAWEI
                     PEEDLAITLENIKRYDMFGINLSMPYKQAVIPYLDSLTDSARLIGAVNTVMHQDGKLI
                     GHNTDGIGFFKSLENLRGFQVDNKRLTILGGGGTSTAIIAQAALDGAKEITIFCRQQS
                     LERTQASIAPIAQATGVPMKVLVNDDSHLMQEEITKSDLLVNGTSVGMDGVSFPVPAS
                     LQFPEKLLVADVIYQPFETPLLKLAQSQGNPTINGLGMLLFQAAEAFQTWTGKEMPTD
                     LIWDQLVQKYDIK"
     gene            3155..>4215
                     /locus_tag="U1041_002086"
     CDS             3155..>4215
                     /locus_tag="U1041_002086"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002308136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEM4769163.1"
                     /translation="MKLTVNLPHNPYDILIQRGSLAQTGAWVKELWKPQKIAIITDDH
                     VGSLYAATVQTSLETAGFETIIFAFPEGEASKNLDTVNQAYEFLVKNAMTRSDGIIAL
                     GGGVVGDLAGFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFCQP
                     DGVLIDPDTLKTLGKRELIEGMGEVVKYGLIDDVELWETLDQLDGSVESILEHADYII
                     YHSCEVKRKVVVEDELDNGVRLFLNFGHTIGHAIEATAGYGQVMHGEAVAIGMVQIAR
                     VAEKKGHMPAGITEKIIAMCEKFGLPTAHQPWNVDELYAALTHDKKARGKTIKLVIVP
                     QLGQAAIHQIPMEEMLEFL"
BASE COUNT         1315 a          944 c          854 g         1102 t
ORIGIN      
        1 cagatttttt ttggaaaatt atatctaaat aaaagcgata ctcaaaatct acagaaatta
       61 aagaaagaat tttcagaatt tactgtaatt tttacacaaa atcatgaata ttggttttaa
      121 attcttaaaa ataatggtat aattgagaaa tctataaatg aaagaggaag acctattgtt
      181 tacaccaatc agcgaaaaaa ttgatatcaa tcaagtacga gaacattcaa aactttctcc
      241 agaaacactt actaaaaaac aagctcgtga ccgtgaactt gaggctattt taaagggaga
      301 agatgaccgt cttctcttgg ttatcggacc atgttcatca gacaatgaag aggccgtttt
      361 ggactacgca caccgcttgg ccaagcttca agaagaggtc aaagataaaa ttttcatggt
      421 catgcgcgtc tatactgcca agccacgtac caatggtgat ggttataaag gactcatgca
      481 ccaaccagat acagatgctg caccaagcct catcaacgga atcaaagctg ttcgtaacct
      541 ccactatcgt gtcattacgg aaacaggttt aactactgct gacgagatgc tctaccctga
      601 aaatctgcct ttggttgatg acttggtttc ctacatcgct atcggagctc gttcggttga
      661 aaatcagcag caccgttttg tagcgtcagg catcgatgtt ccaacaggct tgaaaaatcc
      721 aacatctggc aacctcaaag tcatgttcaa cggtcttttt gctgctcaga agaagcaatc
      781 cttcctcttc aacaatactg aagttgaaac atctggcaac ccacttgctc acgttattct
      841 tcgtggcgca gtcaatgaaa atggtaaata cctaccaaac tattactatg acaatcttct
      901 agaaaccatt gacctctatg atcaatttgg tttgaaaaat ccattcatca tcatcgatac
      961 caaccatgac aattctggga aaaattattt ggaacaaatc cgtatcgtcc gtcaaacctt
     1021 aatcaaccgt gactggaacg aagccattcg taactacgtt cgcggattca tgattgaatc
     1081 ctacattgaa gacggtcgcc aagacaatcc agatgtctat ggaaaatcca tcacagaccc
     1141 ttgcttaggc tgggaaaaaa cacaagaact catccgagaa atttacaaca gataggaaga
     1201 tattatggga attcacaaac gtagcaccag tttagacatc gacaaagtaa aggaactttc
     1261 caagttagaa ggagaatttc tagctgcaaa aaatcagcgc gatgaagaac tgaaaagaat
     1321 tatccgaggc gaagatgacc gtctgctctt ggttataggc ccttgctcat cagataatga
     1381 agaggccgtt ctagaatatg cacgtcgtct ctctaagctt caagatgaag tcaaagataa
     1441 aattttcatg gtcatgcggg tttataccgc caaaccacgc accaacggag agggctataa
     1501 aggactggtc caccagccag atacttctaa attaccagac ctcattaacg gtatcgctgc
     1561 tgttcgtaat ttgcattacc gtgtcattac tgagaccgga ctcacaactg ctgatgaaat
     1621 gctctactct gccaactacc ctcttgtgga agacttggta tcctaccacg ctatcggagc
     1681 acgttcggtt gaagaccaag aacatagatt tgttgcatca ggtgtcgata tgccaactgg
     1741 tatgaaaaac ccaacttctg gtaatttgac cgttatgttc aatggtatct acgccgcaca
     1801 aaacaaacag aactttattt accgtgatgc agaagttgat acagatggta accctctagc
     1861 tcatgctatc cttcgtggtg ccaatactga aaagggcggt tatgagccaa actactacta
     1921 tgatattctc ttgaaaacca tcaaacagta tgaacaattt ggtcttaaaa atccatttat
     1981 cgtaattgat accaaccacg acaattctgg taaaaactac ctggaacaaa tccgtatcgt
     2041 ccgtcaaacc ctcatcaacc gagcttggaa cgaatccatt cgcaaatatg tccgtggttt
     2101 catgattgaa tcctacttag aagacggccg tcaagatagc cctgaggtat tcggcaaatc
     2161 cattaccgat ccttgcttag gttgggaaaa aacggaagcc cttatccgtg aaatctacca
     2221 gaccttataa actcaacaat taaaaaaatc agatgaaaaa tggaggaaac ctgtgactat
     2281 tgatggatat actcgcttag ctgctgttgt agccaagcca atcaaacact ctatttcccc
     2341 ctttattcat aatctggctt ttcaagatac aggtgtaaat ggagtctatg ttgcttggga
     2401 aattcctgag gaagacttgg ctattacgct agaaaatatc aaacgatacg atatgtttgg
     2461 tatcaacctg tccatgccct ataagcaggc tgtcatcccg tatctcgata gcctgactga
     2521 ctctgctcgc ttgattgggg cggtcaatac agtaatgcat caggatggaa agctaattgg
     2581 gcataatact gacggcattg gatttttcaa gagcttggaa aatttaagag gatttcaagt
     2641 agacaacaaa cgcctaacca ttcttggagg tggtggtact tctaccgcta tcattgctca
     2701 ggctgctcta gatggggcca aggaaattac gattttctgc cgccaacaaa gtttggaaag
     2761 aacacaggcg agtattgcac caattgctca agctactgga gtgcctatga aggttctagt
     2821 caacgatgat agccatttga tgcaagaaga aattaccaag tcagacttgt tggtcaacgg
     2881 taccagtgtc ggtatggacg gagtttcttt tcctgtccct gccagcctac aattcccaga
     2941 aaagctcttg gttgcagatg tgatttacca accatttgaa acacctttat tgaaacttgc
     3001 ccagtcacaa ggcaacccta ctattaacgg attgggcatg cttctcttcc aagcagccga
     3061 agccttccaa acctggactg gtaaagaaat gccgactgac ttgatttggg accaattagt
     3121 ccaaaaatac gacatcaaat agagaggaaa tctgatgaaa ctgaccgtca atcttcccca
     3181 caatccctac gacatcctca ttcaaagagg aagtttagca cagacaggtg catgggtcaa
     3241 agaactttgg aaacctcaga aaatcgccat tatcacagat gatcatgttg gttcgcttta
     3301 tgctgccacc gttcaaacta gtctggaaac agctggcttt gaaaccataa tctttgcatt
     3361 tccagaaggt gaagcatcaa aaaatcttga cactgtcaat caggcttacg aatttctcgt
     3421 aaaaaatgct atgacacgca gtgacggaat cattgccctt gggggcggtg tcgttggtga
     3481 tttggctggc tttgttgcat ctacttacat gcgtggcatt catttcctac aaatcccgac
     3541 cagcctaact gcccaagtcg attcttctat cgggggaaaa actggcgtga atacaccatt
     3601 tgccaaaaat atggtaggta ccttctgcca gccagacggc gttctcatcg accctgatac
     3661 cctcaaaacc ctaggcaaac gtgaattgat tgaaggaatg ggcgaggttg tcaaatatgg
     3721 cttaatagat gatgtggagc tctgggaaac cctagaccaa ctagatggat ctgtcgagag
     3781 cattttggag catgctgact atatcatcta ccactcctgt gaagtcaaac gcaaggtcgt
     3841 tgtcgaggat gaattggaca acggtgtcag actcttcctc aactttggcc acaccattgg
     3901 acatgctatc gaagctaccg ctggctacgg tcaagtcatg cacggtgaag ctgttgccat
     3961 cggtatggtt cagattgcac gtgtagctga gaaaaaagga cacatgccag ctggtatcac
     4021 tgaaaaaata atcgccatgt gcgaaaaatt cggcttgcca actgctcacc aaccttggaa
     4081 tgtagatgaa ttatacgccg ccctaactca cgataaaaaa gcacgtggca agaccatcaa
     4141 actcgtcatc gtaccacaat taggacaggc tgctatccat caaattccaa tggaagaaat
     4201 gctagaattt ctaca
//
LOCUS       DASFQS010000140         4212 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.144, whole genome shotgun sequence.
ACCESSION   DASFQS010000140 DASFQS010000000
VERSION     DASFQS010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4212
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.144"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            445..1404
                     /locus_tag="U1041_002087"
     CDS             445..1404
                     /locus_tag="U1041_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4769164.1"
                     /translation="MGFKKIILSSVALLSAVTLAACSSNSSDSSSVNVGIIQYAEHEA
                     LSSAREGFVEALEEAGYKEGENLTIDLQNAQGDQANLQTMVEKLAGKNDLNFAIATPA
                     AQAMLNADSETSSVFTAVTDPVEAGLVESLEKPGGTMTGSTDATDVEGQIEMLLKVVP
                     TAKTVGIFYNSSEVNSEVQAEQAKKALEAKGVKVEVTTVTTTNDVQQAITSLAGKVDA
                     IYLPTDNTVASTASTIGDILKEAKVPAMGSDAAVIDAALFTYGVDYHAIGVQAGELAV
                     KILKGEKPADLAVEKPNTAAITVNEEMAKAVGIDAATIKALEE"
     gene            1428..2402
                     /locus_tag="U1041_002088"
     CDS             1428..2402
                     /locus_tag="U1041_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4769165.1"
                     /translation="MYYKLVKKLATISVASMGLLTLAACSSSSEQASSDVVKVGVLQY
                     MEHESLTAAREGFVAELEANGYKEGEKLVLDYQNAQGDQANLQTISEQLIDGNDIVLA
                     IATPSAQSLATVSTETPIVFTAVTDPLSADLVESIEKPGGLLTGTSDQAPIDKQVELL
                     GQAVPDAKTVGILYTTSERNSEVQVEQAKELLEKAGYKVVVKGITSTNEVQDATTSLM
                     KDVDALFIPTDNTVASTMTMIGELSVEHKVPVIGGSTDMVDEGGLLTYGTNYEALGRQ
                     TAKMAIKIIEGANVSETAVDYPETVSLHVNEEMAQKLGIDTSKLAVSE"
     gene            2457..3350
                     /locus_tag="U1041_002089"
     CDS             2457..3350
                     /locus_tag="U1041_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4769166.1"
                     /translation="MDIILSSISQGLLWSVMAIGVYLTFRILDIADMTAEGSYPLGAA
                     VCATGIVNGVNPLLATFMAMVAGMGAGLISGLLHTKLKIPALLTGIVTLTGLYSINLK
                     ILGKANVALLKQETLVTQLQDFGLTKTNAVLVIGLVFVLAVVGLLTLLLNTQIGLAIR
                     STGDNIPMSEANGINVDNMKIYGYMLSNGLIALCGALLTQNNGYADLNSGTGTIVIGL
                     ASVIIAEVILRNLRLGWRLLSVVLGAVVYRLIILAILEIPGMDADLVKLFSAILLATV
                     LYVPELQKKLNIRRPKLNGNA"
     gene            3360..4160
                     /locus_tag="U1041_002090"
     CDS             3360..4160
                     /locus_tag="U1041_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4769167.1"
                     /translation="MSTILSIQNIHKTFEAGTVNENHVLRGLNLDVKEGDFISIIGGN
                     GAGKSTFMNSLAGALTVDSGDILLEGKSIKHVSAAKRSKDISRVFQDPKMGTASRLTI
                     EENMAIAYRRGLSRGLGWGVKDSERAIFKESLKELGLGLENRMKVDTQFLSGGQRQAL
                     TLMMASLVKPKVLLLDEHTAALDPKTSDMVMELTKKIVESHQLTALMITHNMENAIEY
                     GNRLVMLHRGQIVVDVEGEEKKNLTVQNLMDLFYKNSGEKLTDDEMIL"
BASE COUNT         1289 a          739 c          958 g         1226 t
ORIGIN      
        1 atcatttcgt tagtaaattc catgtttcag ctaataatat agggggctat ttttagaaaa
       61 atttgaaaaa acttgaaaaa tctgaaaatt tacgcaattt cctattgaca aataatttga
      121 aaacagttat gatagttaca aataaatgag aaagggaaac agagatgtta caaatgtgtc
      181 aaaatcattc agttaatcat acttatttct acggctactt tagatagtgt ttgtagacat
      241 ggtaaacatg gatgcaaaca cgggaacgta aagtttgtat ctatgtggct gtagctattt
      301 tgacatgtgc ccatagatga tacatctaaa tggcacgaat aattcattct gttttcctac
      361 acagatgaaa tataaggacc gtttagagtg tagtctaagc ggtcctttct tgtttgctat
      421 tatatttata aaaggagaat aatcatggga tttaaaaaaa ttatacttag ttcagtagca
      481 cttttgtcag cagtaacgct tgctgcatgc agttccaatt cgtcagattc aagttcagtc
      541 aatgttggta ttattcaata tgctgaacat gaagcgttga gctcagctcg tgaaggcttt
      601 gtagaggcgc ttgaagaagc aggctacaag gaaggtgaaa atctgacgat tgatttgcaa
      661 aatgcccaag gtgatcaagc aaacttacaa acaatggttg agaaattggc aggaaaaaat
      721 gatcttaact ttgccatcgc aacaccggca gcccaagcca tgcttaatgc agatagtgaa
      781 acatcaagtg tattcacagc tgtcacagat ccagttgaag caggtttggt tgaatcattg
      841 gaaaaaccag gtgggaccat gacgggatcg actgatgcaa ctgatgtgga aggtcaaatc
      901 gagatgttgc tcaaagttgt accaactgcg aagactgtcg gtattttcta caattctagc
      961 gaggtaaact cagaagtcca agctgagcag gctaaaaaag cactcgaagc aaaaggtgta
     1021 aaagtagaag tgacaacagt tacgacgaca aacgatgttc agcaagctat tacttcactt
     1081 gcaggaaaag tcgatgctat ctatcttcca actgataata cagttgcctc tacagcttca
     1141 acaatcggtg atattttaaa agaagcaaaa gttccagcta tgggaagtga cgcggcagtt
     1201 attgacgcag ctctatttac ctacggtgtc gactaccatg ctatcggtgt tcaagctggt
     1261 gaattggcag tgaagatttt gaagggtgaa aagccagctg acttagcagt tgaaaaacca
     1321 aatacagcgg ctattaccgt caatgaagaa atggctaaag ctgttggtat tgatgcagca
     1381 actataaaag cattagaaga gtaaaatatt taggagaaga aacgtttatg tattataagc
     1441 tagtaaaaaa attggcaact atttcagtag caagtatggg tttgctaaca cttgcagctt
     1501 gttcctcatc atcagaacaa gcttcctcag atgtggtcaa agttggagtt ctccaatata
     1561 tggagcatga atcattgaca gctgcccgtg agggttttgt ggcggaatta gaagcaaatg
     1621 gctacaaaga gggtgaaaaa ttggttttgg actatcaaaa tgcccaaggt gatcaagcta
     1681 accttcaaac catttcagaa caattaatcg atggaaatga tattgtcttg gcaatcgcta
     1741 cgccgtctgc ccagagttta gcgactgtgt ctactgaaac gccgattgtc tttactgcgg
     1801 ttacagatcc cttgtcagct gatttggtag aatccattga aaaaccaggt ggactgttga
     1861 caggtacttc tgatcaagct ccaattgaca aacaagttga attgctagga caagctgttc
     1921 ctgatgctaa gacagttggt attttgtaca ctactagcga acgtaattca gaagtccagg
     1981 tagagcaagc taaggaattg ctagaaaaag caggttataa ggtagtggta aaaggaatca
     2041 cttcgactaa tgaagtacaa gatgcgacaa caagtttgat gaaggatgta gatgctctct
     2101 ttattccaac agacaatact gtcgcttcaa ccatgaccat gatcggtgaa ttatctgtgg
     2161 agcataaggt tccagtaatc ggtggttcaa cggacatggt ggatgaagga ggtcttttga
     2221 cttacggtac caactatgaa gctttaggtc gtcaaactgc aaaaatggct attaagatta
     2281 tcgaaggagc caatgtgtca gaaacagcgg tagattaccc agagaccgtc agtcttcacg
     2341 ttaatgaaga aatggctcag aaattaggta tcgatacttc taagcttgct gtatctgaat
     2401 aagatcggta tgatagaacc tagtattgac tacgaattta gaaaaaggag aaaatcgtgg
     2461 atattatttt atcaagtatc tcgcaaggct tgctttggtc agttatggcg attggtgttt
     2521 acttgacgtt tcgtatttta gatattgctg atatgacagc tgaggggtct tatccgcttg
     2581 gagctgctgt ttgtgcgaca gggattgtga acggagtgaa tcccttgctg gcaaccttta
     2641 tggctatggt agctggtatg ggtgcaggat tgatttctgg tttacttcat acaaaactaa
     2701 aaattccagc ccttttgacc ggtattgtaa ccttgacagg tctctactct atcaacttga
     2761 aaatattagg caaagccaat gtagccctgc tcaaacaaga aacactggtg acccaattgc
     2821 aggattttgg tttgacaaaa acaaatgccg ttttggtgat tggtctggtc tttgtactag
     2881 cagttgtagg cctattgacg ctcttgctca atacacaaat tggtctagct attcgttcaa
     2941 caggggataa tattccaatg agtgaggcca atggtatcaa tgtagacaat atgaaaatct
     3001 acggttatat gttgtcgaat ggtctaattg ccctttgtgg tgctcttctt actcagaata
     3061 atggctatgc agatctcaac tcaggtactg gtactattgt tatcggtcta gcatctgtca
     3121 ttattgcaga agttatcttg cgtaacttac gcttgggttg gagactccta tcggttgttc
     3181 tcggtgcagt tgtttaccgt ttgattatct tagcgatttt ggaaattcca ggtatggatg
     3241 cagaccttgt taaactcttc tcagctatcc ttctggcaac cgttctctat gtgccagaat
     3301 tgcagaagaa attgaatatt cgtcgtccaa aattgaatgg aaatgcttag gaggaagtca
     3361 tgtctacaat tttatcaatt caaaatattc ataaaacctt cgaagctgga acagttaatg
     3421 agaaccatgt ccttcgtggg ttgaacttag atgtgaaaga aggggatttt atctctatca
     3481 tcggtggtaa tggtgctggt aaatcaactt tcatgaactc acttgcaggt gccttgacgg
     3541 ttgattcggg cgatattttg cttgaaggta aatccattaa gcatgtctca gctgccaaac
     3601 gctctaagga catcagccgt gttttccaag atcctaagat gggaacagct tcccgcttga
     3661 ccattgaaga aaatatggct attgcctatc gtcgtggatt gtcacgtggt ctcggttggg
     3721 gtgtgaagga tagtgaacgt gctattttta aggaatcctt gaaagagctt ggtctgggac
     3781 tagaaaaccg tatgaaggtg gacacgcaat ttctttcagg tggtcaacgt caggctctga
     3841 ccttgatgat ggcttcgctg gttaaaccaa aagttctgct cctggacgaa catactgctg
     3901 ccctggatcc aaaaaccagc gatatggtta tggaattgac caagaaaatc gtggaaagtc
     3961 accagttgac agctctgatg attacgcata atatggaaaa cgccattgaa tatggaaatc
     4021 gtttggtcat gttgcaccgt ggtcagattg ttgtcgatgt agaaggagaa gagaagaaga
     4081 acttgactgt tcaaaacttg atggaccttt tctacaaaaa cagcggtgag aaactaactg
     4141 acgatgagat gattttataa aaaaataaga ctactgattt attcaagtca gtagtctttt
     4201 ttcttatatc gt
//
LOCUS       DASFQS010000141         4201 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.145, whole genome shotgun sequence.
ACCESSION   DASFQS010000141 DASFQS010000000
VERSION     DASFQS010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4201
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.145"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            172..1776
                     /locus_tag="U1041_002091"
     CDS             172..1776
                     /locus_tag="U1041_002091"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000170456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEM4769168.1"
                     /translation="MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYI
                     NIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKE
                     RKGEYLGATVQVIPHITDALKDKIKRAARTTDADVIITEVGGTVGDIESLPFLEALRQ
                     MKADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEQPAG
                     QGIKNKLAQFCDVAPEAVIESLDVEHLYQIPLNMQAQNMDQIVCDHLKLDVPPADMTE
                     WTAMVNKVLNLQKKVKIALVGKYVELQDAYISVVEALKHSGYANDAAIELDWVNANDL
                     TAENVAERLGQAQGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCVEFA
                     RHVLGLEGANSFELDPETKYPIIDIMRDQIGVEDLGGTLRLGLYPSKLKRGSKAAAAY
                     DNQEVVQRRHRHRYEFNNEFREQFEKAGFVFSGVSPDNRLVEIVEIPENKFFVACQYH
                     PELQSRPNHPEGLYTAFVSAAMENEK"
     gene            2054..2139
                     /locus_tag="U1041_002092"
     tRNA            2054..2139
                     /locus_tag="U1041_002092"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2088..2090,aa:Leu,seq:aag)
     gene            2374..3255
                     /locus_tag="U1041_002093"
     CDS             2374..3255
                     /locus_tag="U1041_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="HEM4769169.1"
                     /translation="MPLVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKQAP
                     VLIQTSMGAAKYMGGYKVARNLIANLIESMNITVPVAIHLDHGHYEDALECIEVGYTS
                     IMFDGSHLPVEENLAKAKEVVELAHAKGISVEAEVGTIGGEEDGIVGTGELAPIEDAV
                     AMVATGIDFLAAGIGNIHGPYPANWEGLDLDHLRKLTEAVPGFPIVLHGGSGIPDAQI
                     QEAIKLGVAKVNVNTECQIAFANATRKFAAAYEANEAEYDKKKLFDPRKFLADGVKAI
                     QASVEERIDVFGSANKA"
     gene            3648..3836
                     /locus_tag="U1041_002094"
     CDS             3648..3836
                     /locus_tag="U1041_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008536053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEM4769170.1"
                     /translation="MAKVCYFTGRKTVSGNNRSHAMNQTKRAVKPNLQKVTVLIDGKP
                     KKVWASARALKSGKVERV"
BASE COUNT         1416 a          746 c          890 g         1149 t
ORIGIN      
        1 ttaaaaataa tttgacaaga ctaccaaatt acgataagat attatcgggc acctcttttg
       61 aggtcggagc tccctagcga tagggagcta tttttgtttt ttcttcaagt taacaggaag
      121 tatccccaca aattgcttcc tattagcctg aatcgtagaa aaggagtttg catgacaaag
      181 tatatttttg taacaggtgg cgttgtttcc tctatcggca aagggattgt agcagccagc
      241 ctaggtcgtt tattgaagaa ccgaggtctc aaggtaacaa tccaaaaatt tgatccatac
      301 atcaacattg acccgggaac aatgagtccg tatcaacacg gtgaagtttt tgtgacggac
      361 gacggcgcag aaaccgactt ggaccttgga cactatgagc gcttcataga tattaacctg
      421 aacaaatatt caaatgtaac aacaggtaaa atttatagcg aagtcctccg taaagagcgt
      481 aaaggggaat acttaggggc aacagttcaa gttattccac acattacaga tgctttgaaa
      541 gacaaaatca agcgtgcagc tcgtactaca gatgcagatg tcatcatcac ggaagtaggt
      601 ggtacagtag gtgatattga aagcttgcca ttccttgaag cgcttcgtca gatgaaggca
      661 gatgtcggtt cagacaatgt tatgtatatc catacaacac tcttgcctta tctcaaagca
      721 gcaggcgaaa tgaaaactaa gccaacacaa cattctgtaa aagagttgcg tggtctaggt
      781 attcagccaa acatgttggt aattcggaca gagcagcctg ctggacaagg aattaaaaat
      841 aaactggcac aattctgtga tgtcgctcca gaagcagtta ttgagtcctt ggatgtcgaa
      901 catctttacc aaatcccatt aaatatgcaa gcgcagaaca tggatcaaat tgtttgcgat
      961 cacttgaagc tcgacgtacc tccagcagat atgacagagt ggacagcaat ggtaaacaag
     1021 gttcttaatc tccagaaaaa agtaaaaatc gctttagttg gtaagtatgt agaattacaa
     1081 gatgcctata tttctgtagt tgaagctcta aaacactcag gatatgcaaa tgatgctgct
     1141 atcgaattgg actgggtcaa tgcaaatgat ttgacagcag aaaacgtagc tgaacgtcta
     1201 ggacaagcac aaggaattat cgttcctggt ggctttggac aacgtggtac agaagggaaa
     1261 atacaagcca ttcgttatgc tcgtgagaat gacgtgccaa tgctaggggt ttgcttggga
     1321 atgcagctga cctgtgtaga atttgctcgt cacgttctcg gtttagaagg tgctaacagc
     1381 tttgaattag acccagaaac taaatatcca attattgaca tcatgcgtga tcaaattgga
     1441 gtggaagatt taggaggaac tctccgctta ggtctttatc caagcaagct caaacgtggc
     1501 tccaaggctg cagctgctta tgataatcaa gaagttgtac aacgtcgcca tcgtcatcgt
     1561 tatgagttta acaatgaatt ccgtgaacaa tttgaaaaag caggttttgt tttctcaggc
     1621 gtgtcaccag acaaccgttt ggtagaaatt gttgaaattc cagaaaataa attcttcgtt
     1681 gcctgccaat accatccaga actacaatct cgtcctaatc accctgaagg tttgtataca
     1741 gcctttgttt cagcagctat ggagaatgaa aaataagtat aactgttata gaagaagatt
     1801 ggtattattc aatcttcttt tatattttat ataaataaac gaaaaagatg tcagtattta
     1861 tagaagaaaa tacgaaatac cacccccata tagcatcatt gtctagatgg ttttaagcat
     1921 tatatatagt agaatattgc aaaagaatca gctaaatcaa tacgttttgg caaaaaaggt
     1981 aaaaataaaa aataaaattc aaaaaaagtg ttgacaaggc tagttcctaa tgatatacta
     2041 gttcttgtgt taagcgggga tggcggaatt ggcagacgcg caggactaag gatcctgtga
     2101 ccgctttagg tcgtgtgggt tcaagtccca ctctccgcat agtggactag ctaaggctag
     2161 tccttttgct ttgtctagat aagtgcagag cacgatatat gctagttcat aaattacaag
     2221 aatgatacga aacaggcatt attatggctt tcatgaaaag atatgtgaaa gttttctcaa
     2281 aactagacgg tttcaactag cattttcaaa ataaaaatgg tagaatagaa gagtatgagg
     2341 tgcaacctca aaaaatatta ggaggctatc gaaatgccat tagtttcagc agaaaaattt
     2401 gtccaagcag ctcgtgacaa cggttatgca gttggtggat ttaacacaaa caaccttgag
     2461 tggactcaag ctatcttgcg tgcagcagaa gcaaaacaag ctccagttct tatccaaact
     2521 tctatgggtg cagctaagta catgggtggt tacaaagtag ctcgtaactt gattgcaaac
     2581 ttgattgaat caatgaacat tacagttcca gttgctattc accttgacca cggtcactac
     2641 gaagatgcac ttgagtgtat cgaagttggt tacacttcta tcatgtttga cggttcacac
     2701 cttccagtag aagaaaacct tgcaaaagca aaagaagttg tagaattggc gcacgctaaa
     2761 ggtatctcag ttgaagctga agttggtact atcggtggtg aagaagatgg tatcgtaggt
     2821 actggtgaat tggctccaat tgaagacgca gtagcaatgg ttgcaactgg tattgacttc
     2881 ttggcagcag gtatcggtaa catccacggt ccatacccag caaactggga aggtcttgac
     2941 cttgaccact tgcgtaaatt gactgaagct gtaccaggtt tcccaatcgt attgcacggt
     3001 ggttcaggta ttccagatgc acaaatccaa gaagcaatca aattgggtgt tgctaaagtt
     3061 aacgtaaaca ctgagtgcca aatcgcattt gcaaacgcaa ctcgtaagtt tgcagcagct
     3121 tatgaagcaa acgaagcaga atacgataag aaaaaactct ttgacccacg taaattcttg
     3181 gcagacggcg tgaaagctat ccaagcatct gttgaagagc gtatcgacgt attcggttca
     3241 gcgaacaaag cttaatgtaa ctgcgaagaa atctcagatt tcaagtaaac aaagcataag
     3301 tttcttagat taaaccaaaa aggattttct ttcgagaatc ctttttatta taatagttga
     3361 ttaagtttga tctagttctt tgccatgaag aaatctacga tagaagtgag cagagaacag
     3421 ttaaaatata aaccgctcca aagttttcat gactgtaata acttagagaa cgaagaatta
     3481 tggatggggc gcaaactgta gtattaaaat atttacctat gagtatagat actttaaaaa
     3541 ataaaaatga aaataattct tgccaagtcc aatcttttct gttagaatag tatggtatgt
     3601 ggtgctagca catccgatat atttgatcaa atgaggagga agatacaatg gctaaagtat
     3661 gttatttcac tggtcgtaag actgtatcag gtaacaaccg ttcacacgct atgaaccaaa
     3721 ctaaacgcgc agttaaacca aaccttcaaa aagtaactgt tttgattgat ggtaaaccta
     3781 aaaaagtttg ggcttcagca cgtgcactaa aatcaggcaa agttgaacgt gtataataac
     3841 aaagtcgtta gaaaaatcta gcgacttttg tttttggaaa aaatagccta gatataaagt
     3901 cggtgaggag caaattcggc cactacataa taaacaggaa agaatatcag ctatatagct
     3961 cttcacattg gtgttgaaaa gttaacaaag aaggaacgtt gtcaaaaata aactgtgtat
     4021 tgatgtggaa gatttttcta agtttgaaca tttaaacttg gattgacatt agaagttgta
     4081 cgagagagca tatgtacggg gtctacaaga aggaaatcac gaactggaag aatagagagt
     4141 ttttctcagt ttttcgccaa atttcgccaa atttcataaa aaaatcaaaa aaatccaaaa
     4201 a
//
LOCUS       DASFQS010000142         4144 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.146, whole genome shotgun sequence.
ACCESSION   DASFQS010000142 DASFQS010000000
VERSION     DASFQS010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4144
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.146"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(52..972)
                     /locus_tag="U1041_002095"
     CDS             complement(52..972)
                     /locus_tag="U1041_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769171.1"
                     /translation="MVWTEEKLGPIIHSILNPDEEVLSLYQSKTTKSIYGCILWNSYY
                     YKVFRVSNHPSQSTYKQPTFYDFHGEFYMKGAIRTYLYHTNSWYELSKQSYYLLLFFQ
                     KLWDEKQEVEASWQNGRMQIRLVVEEEGWQVHYRFPDNQAREVERLLASGMLVAIRSS
                     RNFIKIRTSRFVAPYVALIKQRQLYRKKPSKAMLQWEKYQSQLIEIQRIYRLVEESAP
                     QTFFGHWLNKVQLYLCSAIASYWEEVIEGVEWQEAREIKEQRKIEKPHNPIEDKWKEN
                     IARRHKRKVDQLIGHDTLEKLRQLKTELDD"
     gene            complement(1080..1628)
                     /locus_tag="U1041_002096"
     CDS             complement(1080..1628)
                     /locus_tag="U1041_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type riboflavin transporter
                     substrate-binding protein"
                     /protein_id="HEM4769172.1"
                     /translation="MKNNSIKTVVATGIGAALFVVIGLLISIPTFVPNTYIQLQYAVQ
                     SLLSIVFGPIVGFFVGLIGHAFIDALRGGSPWWSWVLASAVFGLVLGFARNRLRIQEG
                     IFDGKDIFAFNIFQAVANLIAWGVIAPVLDILIYSEAANKVFAQGLVAGIANSITVAI
                     AGTLLLAVYAKSQTKTGSLSKD"
     gene            complement(1649..2497)
                     /locus_tag="U1041_002097"
     CDS             complement(1649..2497)
                     /locus_tag="U1041_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HEM4769173.1"
                     /translation="MSNNLLVLQSDFGLVDGAVSAMIGVALQESRDLVVHHLTHDITP
                     YNIFEGSYRLFQTVEYWPEGTTFVSVVDPGVGSKRKSVVALTEQNHYIVTPDNGTLSF
                     IKKYVGIKAVREISEVANRRANTEHSYTFHGRDVYAYTGAKLASGHISFEEVGPELSV
                     DEIVEIPTVPTEVGSDYVKGAIDILDVRFGSLWTSITREEFYTLQPQFEDRFEVTIYN
                     NDMLVYQNQVTYGKSFADVRIGQPLIYINSLYRVGVAINQGSFAKAYNVGVGQNWHIE
                     IKRISN"
     gene            complement(2886..3602)
                     /locus_tag="U1041_002098"
     CDS             complement(2886..3602)
                     /locus_tag="U1041_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4769174.1"
                     /translation="MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPETN
                     SALKFVIDRAKQAQVPKHIIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSN
                     VNRTAANVRSAFGKNGGNMGASGSVSFMFDKKGVVVFAGDDADAIFELLLEADVEVDD
                     VEAEDGTITVYTAPTDLHKAIVALKESGIQEINVTELEMIPQSEVSLEGDDLATFEKL
                     YDALEDDEDVQKIYTNVDGF"
     gene            3763..4074
                     /locus_tag="U1041_002099"
     CDS             3763..4074
                     /locus_tag="U1041_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000827864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4769175.1"
                     /translation="MKRNKHLPLTETTYYILLALLEPAHGYHIMQKVEDMSDGDVKIA
                     AGTMYGAIENLLKLKWICSVPSSDKRRKVYQVTATGQEIIKLETQRIQKLHHIAKELG
                     F"
BASE COUNT         1248 a          908 c          727 g         1261 t
ORIGIN      
        1 accagtcgag ttctttcacg ctcccagtta ttgaaggttc gctataactt cttagtcgtc
       61 taattctgtt ttcagttgtc ggagtttttc caaggtatca tgtccgataa gttggtccac
      121 ttttcgctta tggcgtctag caatattttc cttccattta tcttcaatag gattatgtgg
      181 cttctcgatt ttcctttgct ctttgatttc tcttgcctcc tgccactcca ctccttcaat
      241 aacttcttcc caatagctgg caatggcaga gcagagatag agttggacct tattcaacca
      301 gtgtccaaaa aaagtttgcg gagcactttc ctccactagc cgatagatcc tttggatttc
      361 aataagttga ctttggtatt tttcccactg gagcatagct ttactcggct tttttcgata
      421 aagttgacgc tgtttaatta gagctacata cggtgcaaca aaacgactcg tccgtatctt
      481 gataaaattt ctggaggagc gaatggccac cagcatgcct gaggccaata agcgttcaac
      541 ctcccttgcc tgattatctg gaaaacggta atggacttgc cacccctctt cttcaaccac
      601 taagcgaatc tgcattctac cattttgcca actcgcctcc acctcttgct tttcatccca
      661 taacttttga aaaaagagaa gaaggtagta gctttgttta ctaagttcat accaactgtt
      721 cgtgtggtaa aggtaggtcc gaatcgctcc tttcatataa aattcgccat ggaaatcata
      781 aaaagttggc tgtttatatg tagattgtga tgggtggtta ctaactcgga aaaccttata
      841 ataataacta ttccaaagaa tgcagccata aatcgatttc gtcgttttcg attgataaag
      901 acttaaaact tcctcgtcag gattgagtat agaatgaata atcggtccca acttttcttc
      961 tgtccagacc atacttctcc ccttgaacac atgtttttat ttgttttata ttattatatc
     1021 atatttgtat tttttggtat tgaaaaaacc ctagaatttt ttctagggaa aataaaaact
     1081 taatctttag acaaactacc tgtcttcgtt tgagattttg cataaacagc caaaaggagt
     1141 gtccctgcaa tagcaactgt aatactattt gcaatacctg ccacaagtcc ctgtgcaaag
     1201 accttattcg ccgcctcact atagataaga atatctaaaa ctggggcaat gactccccaa
     1261 gcaatgaggt tagctactgc ttgaaaaata ttgaaagcaa aaatatcttt tccgtcaaaa
     1321 attccttctt gaatacgcag acgatttcta gcaaaaccta acaccaagcc gaaaactgct
     1381 gaggctagaa cccatgacca ccaaggcgac ccacctcgca gtgcgtctat aaaggcatga
     1441 ccaataagcc ctacaaagaa accaacaatt ggtccaaaaa caattgacaa gagcgactga
     1501 actgcatact gcaattgaat gtaggtattt ggtacaaagg ttggaatact aatcagcaaa
     1561 ccaataacca caaagagggc tgcgccgata ccagtagcaa cgactgtttt gattgaatta
     1621 tttttcataa ctatctccta aaatttcttt aattactaat acgtttgatt tcaatatgcc
     1681 agttttgacc tacaccgaca ttataagcct tagcaaatga gccctgatta atcgcaacac
     1741 ctacacgata gagggaattg atataaatca atggctgtcc gatacgtaca tccgcaaagg
     1801 acttgccata ggttacttgg ttttgataca caagcatgtc gttattgtat atggtcactt
     1861 caaagcgatc ttcaaactgc ggttgcaagg tgtaaaattc ttctctcgta atcgaggtcc
     1921 aaagcgagcc gaatcgaaca tccagaatat caattgcacc ttttacatag tccgaaccaa
     1981 cttccgttgg gactgttgga atttccacaa tctcatccac acttaattct ggaccaactt
     2041 cttcaaagct aatgtgtcca gaagccaatt tagctcccgt ataggcataa acatctcgac
     2101 catggaaggt gtacgaatgt tctgtattgg cacggcgatt ggccacctct gaaatttctc
     2161 gaaccgcctt tatccccaca tattttttga tgaaggatag cgtcccatta tctggcgtta
     2221 caatgtagtg attttgttcg gtcaaagcta ctacactctt acgttttgaa ccaactcctg
     2281 ggtcgacaac cgaaacaaat gttgtcccct ccggccagta ttcgaccgtt tgaaagaggc
     2341 gatatgaacc ctcaaagata ttgtacggag taatatcatg agttagatgg tgaacaacta
     2401 aatctctcga ttcttggaga gcaacaccaa tcatcgctga aactgcacca tcaactaaac
     2461 caaaatctga ttgtaaaaca agtaaattat ttgacatagc tcctcctaaa aataatacca
     2521 ctctatcata tcagaaaaga tagaagcttt caaatagctt tttcctaaac aatgctatag
     2581 tttcgcctta tagctaattt ttttagaaca acttatttac atcttcaatc tgaacattta
     2641 acagttggtt atcaattggc aatctggcac taaaaaaaat tcctaacgtc cgttctaatt
     2701 cccaatccag acctcatgct ttaatattca ctcaaaaaat accgcctaac ggcagttcca
     2761 atctcctagc ttctaataaa aatgactgtc ccccggaatt ttgagtataa agaaaactgc
     2821 ctgccggtag ttccaatctc caacctttta atataaaaaa agtgctacta gcactttttt
     2881 ttatattaaa acccatctac atttgtgtaa attttttgga cgtcttcgtc gtcttcgagg
     2941 gcatcgtaga gtttttcaaa tgttgcgagg tcatcgcctt caagtgatac ttctgattgt
     3001 ggaatcattt caagttcagt gacgttgatc tcttggattc ctgattcttt aagtgccacg
     3061 atggccttgt gcaaatcagt tggtgctgta taaacagtga ttgtgccgtc ttctgcttct
     3121 acgtcatcca cttcgacatc tgcttcaagg agcaattcga agatggcatc tgcatcatca
     3181 ccagcaaaga caaccacacc ttttttatca aacatgaatg atacagaacc agatgcaccc
     3241 atgttaccgc catttttacc aaaggcagag cgaacattgg ctgcggtacg gtttacattt
     3301 gatgtcaagg tatcaacaat aatcatagaa ccatttggtc caaagccttc gtaacgacct
     3361 tctacgaaag tttcgtctgt atttcctttt gccttgtcaa tagccttgtc aatgatgtgt
     3421 tttggaacct gcgcttgctt agcacggtcg ataacaaatt tcagcgctga gtttgtttct
     3481 ggatctgggt cacccttttt cgctgctaca tagatttcaa caccaaattt ggcgtaaact
     3541 tttgagttag caccgtcttt tgcggttttc ttggctacaa tattggccca tttacgtccc
     3601 atggggaacc tcctacattt tataaaatcg ctttattata ccataaatgg caaggattga
     3661 gaagattttt aaaatcttct tcactataca gttgacatgt atagttttcc gatatataat
     3721 atatagcaca actgtacatt tgaactacat aggagaagcc aaatgaaaag gaacaagcac
     3781 ctccccttaa cggagacaac ctactatatt ctattagccc tcttggaacc tgcccatggc
     3841 taccatatca tgcaaaaagt agaggatatg agtgatggtg atgtgaaaat cgctgcagga
     3901 accatgtatg gagcgattga gaatcttttg aaactaaaat ggatttgttc cgttccaagt
     3961 tccgataaaa gaagaaaagt ctatcaagta acagcaacgg gacaagagat tattaaactg
     4021 gaaacacagc gtattcaaaa actacatcat attgctaaag aattaggttt ttaaggagga
     4081 agccatgata agacacaaat tattcaccag tttacaagag gaagaacatt ggattaattc
     4141 gatt
//
LOCUS       DASFQS010000143         4122 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.147, whole genome shotgun sequence.
ACCESSION   DASFQS010000143 DASFQS010000000
VERSION     DASFQS010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4122
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.147"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            17..700
                     /gene="tsaB"
                     /locus_tag="U1041_002100"
     CDS             17..700
                     /gene="tsaB"
                     /locus_tag="U1041_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEM4769176.1"
                     /translation="MKILALDSSNQALSVALVEDGRLQAETLLAVKKNHSISLMPVVD
                     FLVAQVGWTPKDLDRIVVAQGPGSYTGLRVAVATAKTLAYTLKIDLVGLSSLQSLVPP
                     SLTGLVVPLIDARRNCVYAGFYENGRAVEADKYWSFEDLLSSLSSKENITFVGEVENF
                     MEQIEQALPTAQYQASLPSAYQLAVIGQDLPAVDVTSFEPNYLKRVEAEENWLKDNQA
                     GSESYIKRV"
     gene            697..1137
                     /gene="rimI"
                     /locus_tag="U1041_002101"
     CDS             697..1137
                     /gene="rimI"
                     /locus_tag="U1041_002101"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEM4769177.1"
                     /translation="MIKIKHYDGQENLAEAVLAVMQSVYEQSPWTLEQIVSSMAGQDE
                     DYYLAFEGQELVGFLAVQTVLDEMEILQIAVKADFQRLGIASQLMAAVMDWDGDIFLE
                     VRESNSAAQALYTRQHFTKIGKRKDYYRHPVEDAVMMKRERDER"
     gene            1127..2134
                     /gene="tsaD"
                     /locus_tag="U1041_002102"
     CDS             1127..2134
                     /gene="tsaD"
                     /locus_tag="U1041_002102"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEM4769178.1"
                     /translation="MKDRLILAIETSCDETSVAVLRNDAELLSNVIASQIASHQRFGG
                     VVPEVASRHHVEVITACIEEALLEAEVTAEDLTAVAVTYGPGLVGALLVGISAAKAFA
                     WANGLPLIPVNHMAGHLMAARAVKELEFPLLALLVSGGHTELVYVSEAGDYKIVGETR
                     DDAVGEAYDKVGRVMGLPYPAGRVIDELAHEGQDIYDFPRAMIKEDNLEFSFSGLKSA
                     FINLYHNAQQKGETLSNADLSASFQACVMDILMAKTKKALEQYPVKTLVVAGGVAANQ
                     GLRERLAAEITDVEVIIPPLRLCGDNAGMIALAAVSEYNKENIAGWDLNAKPSLAFEN
                     L"
     gene            2307..3209
                     /locus_tag="U1041_002103"
     CDS             2307..3209
                     /locus_tag="U1041_002103"
                     /inference="COORDINATES: protein motif:HMM:TIGR01784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HEM4769179.1"
                     /translation="MRHTLLRPTQDTVAKKIFQNTEVTKAFISDILDLPVLEVELLDG
                     YQIRLPNDDLPKGFYTVTDILVKLDDGTQVVIEIQIAKQKTFVNRLWAYICTQVHDNV
                     EKIRQEHGDTHSTHESIYPVYGIALLEKNYFDDDKPFHVFSLREEETNEELTVKPKTS
                     SKHHSLLKMAFLELEKYQPETISDYDVKKWFEFFGNRNFTIQPDKIISQAEHALDFTT
                     WTKEEKDMWDKQIDSLEVSYATLVTAMEEGLERGREEGREEVQITSARNFLRSGFPAD
                     AIAENLNLPLDRVLQLQSELNANT"
     gene            3297..3572
                     /locus_tag="U1041_002104"
     CDS             3297..3572
                     /locus_tag="U1041_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769180.1"
                     /translation="MWDRQIDSLEVSYATLMTAKEDGFEKGLERGREEGREEGLEKGL
                     ERGREEVQITSARNFLRSGFPADVIAENLNLPLERVLQLQNELNANS"
     gene            3732..3947
                     /locus_tag="U1041_002105"
     CDS             3732..3947
                     /locus_tag="U1041_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769181.1"
                     /translation="MWDKQIDSLEVSYATLVTAFEDGREEGREELQITSARNFLLAGV
                     DIDIISNSLNLPLERVLQLQSELNANS"
BASE COUNT         1122 a          878 c         1061 g         1061 t
ORIGIN      
        1 aaggaaagag gagaagatga aaatactagc tttagacagc tccaatcagg ccctgtcggt
       61 tgccttggtg gaggacggtc gtttgcaggc ggaaaccctg ctggccgtta agaaaaatca
      121 tagtatcagc ctcatgcctg tggtcgattt tttggtagca caggtgggat ggacgcccaa
      181 agacttggat aggatcgtgg tcgctcaggg gcctggctcc tacacaggtc tgcgggtggc
      241 ggtggcgact gctaagacct tggcctacac cctcaagatc gacttggtgg ggctatctag
      301 tcttcagtct ctggttcctc ctagcctgac gggtctggtg gtgcccctca tcgatgcccg
      361 ccgtaactgt gtctatgcag gtttttatga aaatggcaga gcagttgagg cagacaagta
      421 ctggtctttt gaagacttgc tttctagcct atctagcaag gaaaacatca cctttgttgg
      481 agaagtagaa aactttatgg agcaaatcga acaagctttg ccgactgctc agtatcaagc
      541 cagtctaccg tctgcctatc agttggcggt gattggtcaa gacttgccag cagtagatgt
      601 gaccagcttt gagcccaact atctcaagcg ggtagaggca gaggaaaact ggctcaagga
      661 caaccaagct ggctcagaaa gttatatcaa gcgtgtatga taaaaattaa acactacgac
      721 ggtcaggaaa atctggcgga ggctgttttg gcagttatgc agtctgtcta tgagcagtca
      781 ccttggacct tggaacagat tgtgtctagt atggctggtc aggatgagga ctactatctg
      841 gcatttgagg gtcaggaatt agttggattt ttggctgttc agacggtgct ggatgagatg
      901 gaaatcttgc agattgctgt caaggctgat tttcagaggt tgggaatcgc cagtcaactg
      961 atggctgctg tgatggactg ggatggagac atcttcctcg aagtgaggga gtccaatagt
     1021 gcagctcagg ccctctatac acgccagcat tttaccaaaa taggaaaacg aaaagactac
     1081 taccgccatc ctgtcgagga cgcggtgatg atgaagagag aacgtgatga aagatagatt
     1141 gattttggcg attgagacct cctgtgatga gacctcggtg gctgttttgc gaaatgacgc
     1201 ggagctttta tccaacgtca ttgccagcca gattgccagc caccagcggt ttggtggggt
     1261 ggtgcctgag gtggccagcc gtcaccatgt ggaagtgata acggcctgta tcgaggaggc
     1321 cttgttggag gcggaagtga cggcagagga cctgacggct gtggctgtga cctatgggcc
     1381 tggtttggtc ggtgccttgc tagtcgggat ttcggctgcc aaggcatttg cttgggctaa
     1441 cggtctaccg ctcattcctg tcaaccacat ggcagggcat ttgatggcgg cgcgtgcggt
     1501 caaggaattg gagtttccgc tcttggctct cttggtcagc ggtgggcaca cggagttggt
     1561 ctatgtgtca gaggcaggcg actacaaaat cgtcggtgaa acgcgggatg atgcggtcgg
     1621 agaggcctat gacaaggtgg gacgggtcat ggggctgccc tatccagctg gtcgggtgat
     1681 tgatgagttg gcacatgagg ggcaggatat ttacgacttc ccacgggcta tgatcaagga
     1741 agataatctg gagttttctt tctcaggttt gaaatctgcc tttatcaatc tctaccacaa
     1801 tgcccagcag aaaggggaga ccttgtccaa tgcggatttg tcagcctctt tccaagcctg
     1861 tgtcatggac attctcatgg ccaagacaaa gaaggccttg gagcaatacc ctgtcaagac
     1921 cttggtggta gcgggcggtg tggcagccaa tcagggctta cgagagcggt tggcagctga
     1981 aatcaccgat gtagaggtca tcattccccc gcttcgcctc tgcggtgaca atgcagggat
     2041 gattgccttg gcagccgtta gcgaatataa caaggaaaat attgctggct gggacctcaa
     2101 tgccaagcct agtctggctt ttgagaattt gtaaagaaaa ttttatacgt acctagaaac
     2161 gaactcatca cattttgtgg tgggttactt ttttcatttg tggtatacta tatatagaaa
     2221 agtttttcat ttgatttcga ataaaataag tagaacccca aaaaactggt tccaacatga
     2281 aaaatcaaat gaaaggatgt gggatattga gacataccct actaagacca acacaagaca
     2341 cggttgccaa gaaaattttt caaaacacgg aagtgaccaa ggcttttatt tcagatattt
     2401 tggacctgcc tgttctagaa gtagaacttc ttgacggcta tcagattcgt ctgcccaatg
     2461 atgacttgcc taaaggtttt tacacggtga cggacatttt agtcaaattg gacgatggca
     2521 cacaagttgt cattgaaatc cagattgcca agcaaaagac ctttgtcaat cgcttgtggg
     2581 cttacatttg tacgcaggtg catgataacg ttgaaaaaat tcggcaggaa catggcgata
     2641 cccattctac acatgagtct atttatcctg tttacggtat cgctctcttg gagaaaaatt
     2701 atttcgacga cgacaagcct ttccacgtgt ttagcttgcg tgaagaggag accaatgaag
     2761 agctgacagt caaacccaaa actagctcca agcaccacag cctcttgaaa atggcttttc
     2821 tggagttaga aaaataccaa cccgaaacca tttccgatta cgatgttaaa aaatggttcg
     2881 aatttttcgg caaccgcaac tttaccattc agcccgacaa gatcatatct caggctgaac
     2941 acgccttaga ctttacaacc tggacaaagg aggaaaaaga catgtgggat aagcaaattg
     3001 atagccttga agttagttat gctaccttgg tgactgcgat ggaagaagga ctggagcgag
     3061 gacgtgaaga aggacgcgaa gaagttcaaa tcacctctgc tcgtaatttc ttgaggtctg
     3121 gttttccagc ggacgcaata gctgaaaatc taaaccttcc tctcgatcga gttcttcaac
     3181 ttcaaagtga gttgaacgcc aatacctgat gctggtttac tattcagccc gacaagatta
     3241 tatctcaggc tgaacatgcc ctagatttta caacttggac aaaggaggaa aaagatatgt
     3301 gggatagaca aatcgatagc cttgaggtta gttacgctac cttgatgact gccaaggaag
     3361 acggatttga aaaagggctg gagcgaggac gtgaagaagg tcgtgaagaa ggcttggaga
     3421 aagggttgga gcgaggacgt gaagaagttc aaatcacctc tgcccgtaat ttcttgaggt
     3481 ctggttttcc agcggatgta atagctgaaa atctaaacct ccctcttgaa cgtgttctcc
     3541 aacttcaaaa tgagttgaat gccaatagct aacctctgcc ctccatataa cccgaaacca
     3601 tttccgatta cgatgttaaa aaatggttcg aatttttcgg caatcgtgac tttaccattc
     3661 aacctgacaa gatcatatct caggcagaac acgccttaga ctttacaagc tggacaaagg
     3721 aggaaaaaga tatgtgggat aagcaaattg atagccttga agttagctac gctaccttgg
     3781 tgactgcgtt tgaagatgga cgtgaagaag gacgtgaaga acttcaaatc acctctgccc
     3841 gtaatttctt gttagctgga gttgatattg atatcatatc gaacagctta aacctccctc
     3901 ttgagcgagt tctccaactt caaagtgagt tgaacgcaaa tagctaacat ctgccctcca
     3961 tataacccga aaccatttcc gactacgatg ttaaaaaatg gttcgagttt ttcggcaatc
     4021 gtgactttac cattcaaccc gacaagatta tcgcccaggc tgaaatttat aaaacctacc
     4081 aaagccctct ggatatgctc attcgagggt tttcttgtgc ct
//
LOCUS       DASFQS010000144         3930 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.148, whole genome shotgun sequence.
ACCESSION   DASFQS010000144 DASFQS010000000
VERSION     DASFQS010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3930
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.148"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            45..491
                     /locus_tag="U1041_002106"
     CDS             45..491
                     /locus_tag="U1041_002106"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769182.1"
                     /translation="MTDTKSFEVSKEEMITQFTEIYNEAMKRDPKLLNRIVPQVYNED
                     MFHSIQSIFKFPSVIYTLYATQSSAEAITQFANANPEIKVITMSTGDPRFGTEFFASL
                     HAVNKKVYTHTIHTYDELTKYSALGIDGFYTGLLLPSDMERLSSLR"
     gene            671..1159
                     /locus_tag="U1041_002107"
     CDS             671..1159
                     /locus_tag="U1041_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EbsA family protein"
                     /protein_id="HEM4769183.1"
                     /translation="MIKIFGKIRYHWQPDLSWAIIYWSLTFTPIFIGMTLLLEKLRVS
                     RLFILLLSLFAVLVVLGLHRYFEIKEKHLRIASANPFAVQKIEIATIEKIEVSYLAIR
                     IFSQEFPNGQVYHMRKWPKKYFINHLAIHNCFKGEIELIDHLIKQDYFEEYYTKKAKS
                     IR"
     gene            complement(1148..1342)
                     /locus_tag="U1041_002108"
     CDS             complement(1148..1342)
                     /locus_tag="U1041_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEM4769184.1"
                     /translation="MKIKLIPERCIACGLCQTYSSIFDYDDDGIVVFSDDSQFEKTIE
                     PNPDILKAIKSCPTKAISAD"
     gene            1393..1863
                     /locus_tag="U1041_002109"
     CDS             1393..1863
                     /locus_tag="U1041_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM4769185.1"
                     /translation="MSQEPWNEEVYQTETVSRKERLNKGVASTTVFTVLAIIFFVIVL
                     IIGIMAVYLSIGGGSKTDSTKEFYTPSTTTVVAESSSSAAETQESTSTDTTETSSSLA
                     EATDGSTLTVQAGEGVGQLAARGGISIAELERLNPEKMTTGSWLAHPGDVVRIR"
     gene            1873..2550
                     /locus_tag="U1041_002110"
     CDS             1873..2550
                     /locus_tag="U1041_002110"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEM4769186.1"
                     /translation="MKSIQIAIDGPASSGKSTVAKIIAKNFGYTYLDTGAMYRSATYL
                     ALTNGIEVTDQNRIVALLAQYPIRFGRDENGQQLVFVGDEDVTLPIRDNQVTNNVSAV
                     AALPLVREELVRLQQEIAQAGGIVMDGRDIGTVVLPQAELKIFLIASVEERAMRRFKE
                     NTERGIETDLEILKEEIAARDLKDSTREVSPLKAADDAITFDTTGVSIEGVVKFISEK
                     AKEILDK"
     misc_feature    2577..2705
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            2731..3252
                     /gene="infC"
                     /locus_tag="U1041_002111"
     CDS             2731..3252
                     /gene="infC"
                     /locus_tag="U1041_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000848185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEM4769187.1"
                     /translation="MAKQDLFINDEIRVREVRLIGLEGEQLGIKPLNEAQAIADSANV
                     DLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDKGDFET
                     KLRHARKFLEKGNKVKVSIRFKGRMITHKEVGAKVLAEFAEATQDIAIIEQRAKMDGR
                     QMFMQLAPASDKK"
     gene            3279..3479
                     /gene="rpmI"
                     /locus_tag="U1041_002112"
     CDS             3279..3479
                     /gene="rpmI"
                     /locus_tag="U1041_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEM4769188.1"
                     /translation="MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHL
                     RKAGMVHAGDFKRIKSMLTQMR"
     gene            3529..3888
                     /gene="rplT"
                     /locus_tag="U1041_002113"
     CDS             3529..3888
                     /gene="rplT"
                     /locus_tag="U1041_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019786714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEM4769189.1"
                     /translation="MARVKGGVVSRKRRKRILKLAKGYYGAKHLLFRTAKEQVMNSYY
                     YAYRDRRQKKRDFRKLWITRINAAARMNGLSYSQLMHGLKLAEIEVNRKMLADLAVND
                     AAAFTALADAAKAKLAK"
BASE COUNT         1278 a          692 c          825 g         1135 t
ORIGIN      
        1 gtgatgtgtt agatcaaatg ctgataaata aggatatgtt cttagtgacg gatactaaat
       61 catttgaagt ttctaaagaa gagatgatta ctcagtttac ggaaatatat aatgaggcaa
      121 tgaaacgtga tccgaaatta ttaaatagga tcgttcctca agtatacaat gaagacatgt
      181 ttcatagtat tcagtcaata tttaagttcc caagtgtaat ttatacctta tatgcgactc
      241 agagttctgc ggaggcaatt actcaatttg ccaacgcaaa tcctgaaatc aaggtcatta
      301 caatgtcaac gggtgatccg agattcggta cagagttttt tgctagctta cacgcggtga
      361 ataaaaaagt ttatacccat accattcaca catatgatga attgacgaaa tactctgcgc
      421 ttggaattga tggtttttat accggtctat tattgccaag tgatatggag agattatcga
      481 gtttgaggta atctttatta ttactgatgg cactatttta atcatatcat caaaaaatat
      541 ttcaaaagca tttcagaagt tttacaaaca aactaatatt gtcatgtaaa tgtaataaaa
      601 atttcaaaag atagaggttt tcataggaaa atctctattt ttgtgctaga ataatagatg
      661 gaggttcgat atgatcaaaa tttttggtaa aattcgttac cattggcaac cggatttatc
      721 atgggccatt atttactggt cacttacctt cacgcctatt ttcattggta tgacactttt
      781 attggaaaag ttgagagttt caagattatt tatcttactt ctctctctct ttgctgtatt
      841 agtagtgctt ggcttacatc gctatttcga gataaaagaa aagcatttac ggattgcttc
      901 ggctaatcct tttgcagtac agaaaattga aattgctacc atagaaaaaa ttgaagtttc
      961 ttatctagcc attcgcatat tttcacaaga atttcccaat gggcaggtgt atcacatgcg
     1021 caaatggccg aaaaaatact ttattaacca tttagctatt cataattgct tcaagggtga
     1081 gattgaatta atagaccatt taataaaaca ggattatttt gaagagtatt atacaaaaaa
     1141 agccaaatca atccgctgaa atggcttttg taggacatga tttgatggct ttgagaatat
     1201 ctggattggg ttcaatcgtt ttctcaaatt gtgagtcgtc tgaaaaaaca acgataccgt
     1261 cgtcatcata atcgaatata gatgaataag tttggcagag cccgcaggca atgcaccgtt
     1321 caggaataag ttttattttc atattagtat tgtaatcata ttttaataaa aatacaagga
     1381 gttttctcga taatgtcaca agagccatgg aatgaagaag tttatcaaac agaaacagtt
     1441 agtcgaaaag aacgtctaaa caagggagta gcaagtacaa cagtatttac agtcttggca
     1501 attattttct ttgttatcgt actgattatt ggaattatgg ctgtctatct ctcaatcggt
     1561 ggcggtagta aaacagattc aacaaaagaa ttttataccc caagcactac aacagtcgta
     1621 gcagagagct cttcatcggc tgctgagaca caagaatcta cttcgactga cacgacagaa
     1681 acaagttcca gtctagcaga agctacggat ggctctaccc ttactgttca agcaggtgaa
     1741 ggtgttggac aattagccgc acgtggcggg atttcaattg ctgagctaga gcgattaaat
     1801 ccagagaaaa tgaccacagg gtcttggctt gcgcatccag gtgatgtagt ccgtattaga
     1861 taaagagggg ttatgaaatc aattcaaatt gcaattgacg gtccagcttc aagtggaaag
     1921 tcaacggttg ctaaaattat tgctaaaaat tttggatata cttacttaga tacaggagct
     1981 atgtatcgct cggctaccta tctagccttg acaaacggca tagaggtcac agatcaaaat
     2041 agaatcgtgg ccttgcttgc tcagtaccct attcgatttg gtcgtgatga aaatggccag
     2101 caattagttt ttgtgggtga tgaagatgtc actttaccaa ttcgtgataa ccaagtaaca
     2161 aataatgtat cggcagtagc agcacttcct ctagtacggg aagaattggt acgactgcaa
     2221 caggaaattg cccaggctgg tggtattgtc atggatggtc gcgatattgg aacagttgtt
     2281 ttaccacagg cagaactcaa gattttcctg attgcttcag tggaagagcg tgccatgcgt
     2341 cgttttaagg aaaatacgga acgtggcatc gagacagact tggaaatctt gaaagaggag
     2401 attgcagctc gtgacctgaa agacagtact cgggaggttt cacctttgaa agctgctgac
     2461 gatgccatca catttgatac aacaggagta tccatcgaag gtgtagtgaa atttatttcc
     2521 gaaaaagcga aagaaattct tgacaagtag ttttagacat gttagaatag tcgtattgag
     2581 aaaagcagaa gtgagagctt ctcgccttgc gactaacgtt gtctggctct acggattaag
     2641 atttcttcgg aaagaataat ggtgtagtgc ggacttgttt agcaagtccg tttcgttttt
     2701 ctcgaaaaat ataaaatgag gtgaaaagcc atagcaaagc aagatttgtt catcaatgat
     2761 gaaattcgag tgcgtgaagt tcgtcttatc ggtcttgagg gtgaacagtt gggaatcaaa
     2821 ccgctcaatg aggctcaggc cattgctgat agcgccaacg tggatttagt attgattcaa
     2881 ccgcaagcta aaccaccagt agcgaaaatt atggactacg gtaagttcaa atttgaatat
     2941 cagaagaaac agaaagaaca acgcaaaaaa caaagtgttg tcactgtaaa agaagtgcgt
     3001 ctaagtccag ttattgataa aggggacttc gagacaaaac ttcgtcatgc ccgtaaattc
     3061 cttgaaaaag gaaataaggt taaggtttcg atccgtttca agggtcgcat gattacccac
     3121 aaagaagttg gagcgaaagt attagctgag ttcgctgaag caacccaaga tattgccatt
     3181 atcgaacaac gcgctaagat ggacggacgt caaatgttta tgcaattggc cccagcttca
     3241 gataaaaaat aagcttttta agcaaaagga gaattaacat gccaaaacaa aaaactcacc
     3301 gcgcatcagc taaacgtttc aaacgtacag gttctggtgg attgaaacgc ttccgcgctt
     3361 atacttcaca ccgtttccac ggtaaaacta aaaaacaacg tcgtcacctt cgtaaagcag
     3421 gtatggtaca tgctggtgac ttcaagcgta tcaagtcaat gcttactcaa atgcgctaag
     3481 cactgatata gcactactta ttatttgaat tatttggagg aaaattaaat ggcacgtgtt
     3541 aaaggtggcg ttgtttctcg taaacgccgt aaacgtattt taaaattagc taaaggttac
     3601 tatggagcta aacatctctt gttccgcact gcgaaagaac aagtaatgaa ctcttactac
     3661 tatgcatacc gtgaccgccg tcagaagaaa cgtgatttcc gtaaattgtg gatcactcgt
     3721 atcaacgcgg ctgctcgcat gaacggtttg tcatactcac aattgatgca cggtttgaaa
     3781 ttggcagaaa tcgaagtaaa ccgcaaaatg cttgctgact tggcagtaaa cgatgcagca
     3841 gctttcacag ctcttgcaga tgctgctaaa gcaaagcttg ctaaataaat atataaaata
     3901 aagagtttgg tctgtgtacc aagctcttta
//
LOCUS       DASFQS010000145         3830 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.149, whole genome shotgun sequence.
ACCESSION   DASFQS010000145 DASFQS010000000
VERSION     DASFQS010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.149"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            20..337
                     /locus_tag="U1041_002114"
     CDS             20..337
                     /locus_tag="U1041_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4769190.1"
                     /translation="MYYPVSSILIEFLVLAIVEKQDSYGYEISQTIKIVADIKESTLY
                     PILKKLEKAGYVTTYTQEFQGRKRKYYTITSNGREHLPFLQGEWNSYKDHIDGIIEGS
                     LRK"
     gene            334..1446
                     /locus_tag="U1041_002115"
     CDS             334..1446
                     /locus_tag="U1041_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM4769191.1"
                     /translation="MTRADYLNQLEQALFQLHPSARQEALDYFNEYFDEKDNDEEAII
                     ELGTPDEAAKEIIANLPEDALITEKDQASPHSSKPFDFNFDFDFQFDWENFFNNFKHS
                     AYQARERINLTAKIEELPEFSNLQISLEDQALSVQSYDGETVLLHNPVSEDGSYQAFD
                     YQPVQDSLYISSKPLPDQLYFSNNQISSAILKIPKKLLPLTSLNLKTTDSSLTIVDVQ
                     VCEQMVVNAKDSSISMTKVSCPSSALQLEDSTLTISDGQLSELKLEASDAVITLSSMS
                     LSDARITLEDCVWKLKDFVLEKSLNCQAEDSVLTYKPSTDISLDIWEEDSSLKLPKDK
                     AFTMMKEDDITHLSYKQENSPAQLVIHCQDCQLSIG"
     gene            1458..2036
                     /locus_tag="U1041_002116"
     CDS             1458..2036
                     /locus_tag="U1041_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HEM4769192.1"
                     /translation="MNRKEYLQKLEKHLKNLPKEDFQDTLDYFNEYFDEKENDEQAIQ
                     ELGSPKEAAREILANLYDKEKIEDKPNTRNMVWLTILSILAAPIGIPLAISLVALFIT
                     LLLIIFSLFLLLISLWIVLLSLAIAQLLLAFDLFTLSWSTSLLFTGLAIICLALTLLG
                     SKFTLDLGSKTFLLVLHWIQRKIRKGGYYETA"
     gene            2023..2877
                     /locus_tag="U1041_002117"
     CDS             2023..2877
                     /locus_tag="U1041_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM4769193.1"
                     /translation="MKQLKPFTKISLSLLGLGAILSLIGYLAGGWTNMKTVAENYFQP
                     QTASFTDIRSIEVNERLSIMPSPDNQFHLHYYRNQHKGIDLLSHQVQDGKLTISSAYQ
                     GIVTYDGLLEPILNLVNNQNIAYYQPVLQVPKNSTIESLSGSIQGDVYLDKVTIQDFQ
                     LFVENGDMLIENSHISLIRLLHINGEVAINQSTLTSPADITDTTGSILTVEDGDFKAE
                     NLKLEGKHDISNYDGSIDISLHPKTKTDIHIDASQNNLGIDLPTYSNPQATNYLHIST
                     LDGELNIQ"
     gene            complement(2914..3273)
                     /locus_tag="U1041_002118"
     CDS             complement(2914..3273)
                     /locus_tag="U1041_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEM4769194.1"
                     /translation="MSIFTTILASIVAIEHLYIMYLETFATHSDSTSRVFNMEKEELQ
                     RKSVTTLFKNQGIYNGLLAVFLFYGIFTGNLEITSIFVLYVIAAAGYGAATSSPKIIL
                     TQGGPAILALISILLFK"
     gene            complement(3293..3718)
                     /locus_tag="U1041_002119"
     CDS             complement(3293..3718)
                     /locus_tag="U1041_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM4769195.1"
                     /translation="MQEMEDLLYRLKVADETISNLFEKQLGISLTRYSILQTLLKDAP
                     LHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREALITNP
                     SAHHQDIKTSMNQILTVEESEQFLATLDKLLIGLQNLPI"
BASE COUNT         1224 a          861 c          700 g         1045 t
ORIGIN      
        1 aagataaaga ggtgagttta tgtactaccc cgtatcctct atcttgatag aatttctggt
       61 attagccatc gtggaaaagc aggattccta cggctatgaa atcagtcaaa ccatcaagat
      121 agttgctgat ataaaggaat ccacgctcta ccctatcttg aagaaactgg aaaaggctgg
      181 ctatgtcacc acctataccc aagaatttca agggagaaag cggaaatact ataccattac
      241 ttcgaatggt cgagaacacc tccccttcct gcagggtgaa tggaatagct acaaagacca
      301 tattgacgga attatagaag ggagcttacg aaaatgacac gcgcagatta tttgaaccaa
      361 ctggaacaag cattatttca acttcatcca agtgccagac aggaggcttt agactacttc
      421 aatgaatact ttgacgaaaa ggataacgac gaggaagcta ttatagagct aggaacacct
      481 gatgaagcag caaaagaaat cattgccaat ctacctgaag atgccctaat caccgagaaa
      541 gaccaagcaa gtccacattc atctaaacca tttgatttca actttgattt tgattttcaa
      601 tttgactggg agaatttttt caacaatttt aaacattcag cctatcaagc tagggaaaga
      661 attaatttga cggcgaagat tgaagaatta cctgagtttt caaatctaca gatttcgctt
      721 gaagatcagg ctcttagcgt tcaaagttac gacggagaaa ctgtcttatt gcacaatcct
      781 gtttcagaag atggtagcta ccaggctttt gactatcaac cagtccaaga tagtttgtac
      841 atatctagca agccactccc tgaccagctc tacttctcaa acaatcaaat cagctctgct
      901 attctcaaaa tccctaaaaa actcctgccc cttactagtc tcaatctgaa aacaacagat
      961 agtagtctga caatagtgga tgtgcaagta tgcgaacaga tggtcgttaa tgcaaaagat
     1021 agcagtatca gcatgacgaa agtgagctgc ccaagctctg ctctacagtt agaagactct
     1081 acactaacta tctcagatgg acagctgagc gagttaaaat tggaagccag cgatgctgtt
     1141 atcactctct caagcatgag cctttcagat gcaaggataa cattagaaga ctgtgtctgg
     1201 aagttgaagg attttgtcct tgaaaagagc cttaactgcc aggctgaaga ttctgtctta
     1261 acctataaac caagtacaga catcagtttg gacatctggg aggaagattc tagccttaaa
     1321 cttccaaagg ataaggcgtt tacaatgatg aaagaggatg acatcactca tctcagctat
     1381 aagcaagaaa atagccctgc tcagctagtt attcattgtc aagactgcca gcttagcata
     1441 ggataaagga ggttcccatg aatcgcaagg aatatttaca gaaactcgaa aaacatctca
     1501 aaaacctacc aaaagaagat tttcaagata ccttggacta tttcaatgaa tattttgacg
     1561 aaaaggaaaa cgatgagcaa gctattcaag agctaggcag tccaaaagaa gcagcccgtg
     1621 aaattctggc caatctatat gataaagaga agattgagga taagccaaat acccgcaata
     1681 tggtctggct gaccatcctc tctatccttg ccgcaccaat cggcatcccc ctcgccatca
     1741 gcttggtcgc cctcttcatc acccttctcc taatcatctt tagcctcttt ctgctcctta
     1801 tctcactctg gatcgtcctc ctcagcctgg cgatagccca gctactcctc gcctttgacc
     1861 tcttcacact atcatggtct acctccctgc tcttcacagg cctggccatc atctgcttgg
     1921 ccctcactct attgggtagt aaattcactc tagaccttgg aagcaaaacc ttcttgcttg
     1981 ttttacattg gatacaaaga aagattcgca aaggaggcta ttatgaaaca gcttaaacca
     2041 tttacgaaaa tcagtctgag cctgctaggt cttggagcca ttctaagcct cattggctac
     2101 cttgctggtg gttggacaaa tatgaaaact gttgcagaaa actactttca gccccagacg
     2161 gcaagcttta cggatattcg ttctatagag gtcaatgaaa gactgtccat tatgccctcg
     2221 cctgacaacc aattccacct ccactactat cgaaatcagc acaaaggcat tgacctactc
     2281 agccaccaag ttcaagatgg aaaattgacc atttctagtg cctatcaagg catcgttact
     2341 tatgatggtt tactcgagcc catcttaaat cttgtcaata accagaatat tgcctactac
     2401 caacctgtct tacaggtccc taaaaatagc acaatcgaat cactctcagg gagcattcaa
     2461 ggagatgtct atctggataa agtgactatt caagatttcc aactctttgt tgaaaatggt
     2521 gacatgttga ttgaaaacag tcacatcagc cttattaggc tattacacat caatggagaa
     2581 gtagcaatca atcagtccac attaacaagt ccagcggaca tcaccgatac taccggaagt
     2641 attctaactg ttgaggatgg tgattttaaa gcagaaaacc taaaactaga gggaaagcat
     2701 gacatcagta attacgatgg ttcgattgac atttctcttc atcccaaaac aaaaactgac
     2761 atccatatag atgccagtca aaataatctg ggaattgacc ttccaaccta ttccaatccc
     2821 caagccacta attacctcca tatctctaca ctagatggag aactgaatat tcagtaattg
     2881 caaaaagccc tcctcaacgg aaggcttttt aacctattta aacaacaaaa tagaaattaa
     2941 tgccaagatt gctggtccac cttgggttaa gatgattttt ggactagaag tcgctgctcc
     3001 gtagcctgct gcagcaataa catatagaac aaaaatgctt gtaatttcta aattaccagt
     3061 aaaaataccg tagaacaaga aaaccgccaa caaaccatta tagattccct ggtttttaaa
     3121 tagggttgtc acagacttac gttgtaattc ttccttctcc atattgaata cgcgactagt
     3181 agaatctgaa tgggtcgcaa aggtttccaa atacatgata taaaggtgct caatagctac
     3241 gatactagct agaatagtgg taaaaataga cataatgtct cctctcaaaa aattatatag
     3301 gtagattttg caagccaatc aacagtttat caagagtggc taggaattgc tcgctctcct
     3361 caacagttag aatctgattc atcgaagttt tgatatcttg gtggtgggca gaaggattcg
     3421 tgattagcgc ttccctagcc tgctcagttg gccagacaag tacttctctc tgattgtcag
     3481 gatttcgctt gcgaataata tagccgctct cttccaacaa tttgagatga cgcgtaaccg
     3541 ctgcgcggtc tatctgaagc cgctcctgca aagccaactg atgcaggggt gcatctttta
     3601 ataatgtttg caatattgaa tagcgtgtca aactgattcc caactgcttt tcaaaaagat
     3661 tggaaatcgt ctcatctgcc actttcagtc tgtataacaa atcttccatt tcttgcatta
     3721 tctacctctt ttgattgatt aatcaatcat tgataagtca attatactac aatccgaaca
     3781 attttcaact attttgccta tctattaaaa aaatatgttg cctacaccta
//
LOCUS       DASFQS010000146         3651 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.150, whole genome shotgun sequence.
ACCESSION   DASFQS010000146 DASFQS010000000
VERSION     DASFQS010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.150"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            183..2297
                     /locus_tag="U1041_002120"
     CDS             183..2297
                     /locus_tag="U1041_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEM4769196.1"
                     /translation="MKKKKILLPVMSTLLLAPFVLAQQVQAAETTTAATTTNQPATTD
                     ATATVPATSVENVATEETVVPAAEETVEAVIIHTNDVHGRILEEKNVIGDAKAAAVIE
                     EERAKVENTIVVDAGDAFQGLPISNSTKGEDRANIMNQVGYDAMAVGNHEFDFGMDQA
                     IKYKETLNFPLLSANTYVNGARVFEASTIVDKTPTVVGDEFVVIGVTTPETATKTHPK
                     NVEGVTFTDPVTEVNKVIEEVEARALADNRVYKNYIILAHLGVDSTTPVEWRGSTLAE
                     ALSKNSKLAGKRVIVIDGHSHTVEATTYGDNVTYNQTGSYLNNIGKVTLKSDKLLGEA
                     SLISAADTKNVTPNAKIAALVDEIKAKYETENAQVVIENNPVELNGDRSNVRVRETNL
                     GNAVTDAIYAYGQTGFSNKTSLAVTNGGGLRATIAKDQPVTKGDIIAVLPFGNIVSQI
                     TVTGQQIYDMFTKSLSSTLQVNPETGEMLLDENGMPLFEASGGFLHISGANVFYDPTL
                     PVEERVLLIGILNPETGEYDALDLEKTYYLATNDFLAAGGDGYTMLGGAREEGPSMDS
                     VFAEYLKTADLSAYEVVNPYSRIIPVNSSIDTDEDGYPDFIEILLDTDPENPASNPET
                     VPAENTDSPSNQVQNTSATDKKVPVDSPKVGDKKPEVASPAKTTKAGVLPNTGDQMNL
                     TLSLFGLGLAGLAMAVGRRKEN"
     gene            2349..2996
                     /locus_tag="U1041_002121"
     CDS             2349..2996
                     /locus_tag="U1041_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEM4769197.1"
                     /translation="MQTVFQYQKEGDREQISSYVLLSNSPRRKQLLGFLQPQIASVEV
                     DERGIEEHFMKQFATDDFLIRAAKTCCEISKAKSDMDLVTGHLYISADTIVVSDGQIF
                     NKPQDLTEAETMLRSYFGKSHHVVTSVCLRTRHSLDVFYTVAQIDFVDYYPALEEVIQ
                     SYIREKQPLDKAGAYGIQELDPRFVAGISGDIHTIIGLPVAEVSRRIFSEEGFEK"
     gene            3048..3536
                     /locus_tag="U1041_002122"
     CDS             3048..3536
                     /locus_tag="U1041_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEM4769198.1"
                     /translation="MTVDIERYKQLAQQKQGEHRKFLANLKKKAPKNLDRIVQDIHAE
                     VFSEINCTECANCCKTLGPLFTEADITRIAKHLRMKLPVFEDMYLRVDEDGDKVFQSM
                     PCPFLGGDNLCSIYDARPKACREFPHTDRKKIYQINNLTIKNTLICPAAYLFVEKLRE
                     RI"
BASE COUNT         1170 a          702 c          765 g         1014 t
ORIGIN      
        1 atagactgtt ttagctcaac aactagaaat aaagacttgt tgacgaactc tttttctacc
       61 agtcgagttc tttcccgctc ccttatttcg aaccttttga catgtaagcg attttaatgt
      121 ttttgttttt tgataaaaag tgtataatag agatataaaa aatgccgaag aaaggtctat
      181 ttatgaaaaa gaaaaaaatc ttgttgcctg taatgtccac actcttgttg gcgccatttg
      241 ttttagctca acaagtacaa gctgctgaga caacgactgc agctaccaca accaatcagc
      301 cagcaacgac tgatgcaact gctacggtac cagcaacgtc agttgaaaac gtagcaacgg
      361 aggaaacagt tgtccctgct gcggaagaaa cagtagaggc agtcattatc cacacaaacg
      421 acgttcacgg tcgcattctt gaagaaaaga atgtcatcgg tgatgctaag gctgcggcag
      481 tcattgaaga agaacgtgcc aaagtagaaa atacaattgt agtagatgct ggtgatgcct
      541 tccaaggact tccaatttcc aactctacaa aaggtgaaga ccgcgccaat atcatgaacc
      601 aagtcggcta tgatgcaatg gctgttggta accatgaatt tgactttggg atggatcaag
      661 caatcaagta caaggaaacc ttgaacttcc cgttattgag tgctaacact tacgttaatg
      721 gcgctcgtgt ttttgaagct tcaactattg tcgataaaac tccaactgtt gtaggtgatg
      781 aatttgtagt tatcggtgta acaacacctg aaactgctac aaaaactcat ccgaaaaatg
      841 ttgagggagt aacatttact gacccggtca cagaagtcaa taaagtgatt gaagaagtgg
      901 aagcgcgtgc tctagcagat aatcgtgttt acaagaacta tatcattcta gctcacctag
      961 gtgtcgattc tacaacacct gttgaatgga gaggttcaac tcttgctgaa gcactttcta
     1021 aaaatagtaa attagctggt aaacgtgtta ttgttatcga cggtcattcc cacacggtag
     1081 aagcaactac ctatggagat aacgttactt ataatcaaac aggctcttac ttgaacaata
     1141 ttggtaaagt aaccttgaaa tccgataaat tattgggtga agctagtttg atttctgccg
     1201 cggatactaa gaacgtgacg ccaaatgcta aaatcgcagc cttggttgat gaaattaaag
     1261 caaaatatga aactgaaaat gctcaagtag ttattgaaaa taacccagta gaattaaacg
     1321 gagatcgctc aaacgtgcgt gttcgtgaaa ccaacttggg gaatgcagtg acggatgcga
     1381 tctatgccta tggtcaaaca ggattttcaa acaaaactag ccttgctgtg actaacggtg
     1441 gtggtctacg tgcaacaatt gctaaagatc agcctgttac aaaaggtgat attattgcag
     1501 tcttgccatt tggtaacatt gtttctcaaa tcactgtgac tggtcaacaa atttatgata
     1561 tgtttaccaa gtctttatca tctacattgc aagtgaatcc agaaactggc gagatgcttt
     1621 tagatgaaaa tggtatgcca ctctttgaag ctagtggtgg attcctacac atttcaggag
     1681 caaatgtatt ctacgatcca actcttcctg tagaagaacg tgttcttctt atcggtattc
     1741 ttaatccaga gactggcgaa tatgacgcct tggatcttga aaaaacgtac tatttagcaa
     1801 caaatgactt ccttgctgct ggtggtgatg gctacacaat gcttggagga gcacgtgaag
     1861 aaggtccttc aatggacagc gtctttgctg aatacctaaa gacagctgac ttatcagctt
     1921 atgaggttgt caacccatat tcacgtatca ttcctgtaaa ttcaagcatt gatacggatg
     1981 aagatggcta cccagacttt atcgaaatct tattggatac tgatccagaa aatccagcct
     2041 caaatccaga aactgttcca gccgaaaata cggattcacc atctaatcaa gtacaaaata
     2101 cttcagcaac ggacaagaag gtcccagttg attctccgaa agtaggagat aaaaaaccag
     2161 aagtagcaag tccagcaaaa actacaaaag caggagtctt gccaaatact ggtgatcaga
     2221 tgaatctgac gctcagcctg tttggtttag gtcttgcagg actggccatg gcagtaggtc
     2281 gtagaaaaga aaattaatca atcatctgaa aacagggtct tcggactctg tttttgactg
     2341 gaggaaacat gcaaactgta tttcaatatc aaaaagaggg ggatcgtgag cagattagtt
     2401 cttacgttct gcttagcaac tccccgcgtc gtaaacaatt attgggattt ttacaaccac
     2461 aaatcgcatc agttgaagtg gatgagcgtg gtatcgaaga acattttatg aaacaattcg
     2521 ctacagatga ttttctcatt cgagctgcaa aaacctgttg tgaaatttcc aaagccaaat
     2581 cggacatgga tttggtaact ggtcatctct acatttctgc ggatacaatc gtcgtgtcag
     2641 atgggcaaat ttttaacaag cctcaagatt tgacagaagc tgaaaccatg ttacgttcct
     2701 attttggaaa gagccatcac gtagtaacat ctgtttgcct acggacaaga cactcactgg
     2761 atgtttttta tacggttgca cagattgatt ttgttgacta ttatccagcc cttgaagagg
     2821 ttattcaatc atatatccgt gaaaagcagc cactcgacaa ggcaggtgca tacggtattc
     2881 aggagctgga tccacgcttt gtggcaggta tttctgggga tattcacacc attattggtc
     2941 tgcccgtagc cgaagtttcc cgcaggattt tttctgaaga aggttttgaa aaatagcaga
     3001 gctcaatagc tagtttgtgg tataatagtg gtcgaaaagg agagtttatg accgtcgaca
     3061 ttgaaagata caagcaattg gcccaacaga agcaaggaga acatcgaaaa tttctagcaa
     3121 atttgaagaa aaaagcacct aaaaatttgg atagaattgt tcaagatatt catgccgaag
     3181 tattttctga aatcaactgt acagagtgtg ccaactgttg taaaacgttg ggaccactct
     3241 ttacagaagc agatattacc cgaattgcca agcatttgcg tatgaaactt ccagtttttg
     3301 aggatatgta tttgcgtgtg gatgaggacg gagataaggt atttcaatcc atgccctgtc
     3361 ccttccttgg aggcgataat ctatgtagta tctatgatgc tcgtcccaaa gcctgtcgag
     3421 aatttccgca tactgatcgc aagaagattt atcaaatcaa taatttaaca ataaaaaata
     3481 ctctgatttg tcccgcagcc tatctctttg tcgaaaagtt acgggagaga atttaagagg
     3541 aacaagtaag acaaaatatt gattttctgc tataataata aaaaaacaag ccgtttttac
     3601 ggcttcagaa cgtagacaaa ctcctaaaaa tataaaaact tgaagaagtt t
//
LOCUS       DASFQS010000147         3581 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.151, whole genome shotgun sequence.
ACCESSION   DASFQS010000147 DASFQS010000000
VERSION     DASFQS010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.151"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            94..354
                     /locus_tag="U1041_002123"
     CDS             94..354
                     /locus_tag="U1041_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016511179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769199.1"
                     /translation="MKYRKKPVAIEAIQFFDNPETLANLSELGLDPVNIDYEIPSMPV
                     LKIPTLEGIMTAIEGDFIIKGVQGEFYPCKPGIFAETYEIAE"
     gene            506..1108
                     /locus_tag="U1041_002124"
     CDS             506..1108
                     /locus_tag="U1041_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019418849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769200.1"
                     /translation="MAEEQTVDHATENVEEVAEKTFSQEDVNRVGKKEHKSGYAKAIK
                     DLGFADVESAKEALKAYEDWQESQKTEADKQTELLASKDRELASVLDANKRLEAKLSA
                     LTQGVNADSVDDVIALSERLVNEDTTIDEAIKQVVGKYPQFATAPNTTEKKPTFTVVD
                     NPSASAKTDVSKDQFKEMTYMERLELKQTNPKLYEQLKGN"
     gene            1110..1922
                     /locus_tag="U1041_002125"
     CDS             1110..1922
                     /locus_tag="U1041_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011888691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N4-gp56 family major capsid protein"
                     /protein_id="HEM4769201.1"
                     /translation="MATGLTKMEQMLDPEVLADMIDAEIGKAIRFAPLAEVDTTLQGQ
                     PGTTLTVPKWDYIGDAEEVAEGEPIPVTQLGFTKTKMTIKKIGKSVEITDEAILSGYG
                     DPVGQAAKQIVQAIDHKVDADVLVALQGSTQTVTASITVDGLSKALDIFNDEDDTPTV
                     LVLNPADASALRLDAGKTWLSATELGASRIVSGVYGEILGVQIVRSRKCPKGTGFLVR
                     EGALKIMLKRETMVETDRDKKRLINAIIANKHYGVYLYKAEKAVKITFAPSV"
     gene            1938..2129
                     /locus_tag="U1041_002126"
     CDS             1938..2129
                     /locus_tag="U1041_002126"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769202.1"
                     /translation="MPKYTVKKAYIDKDTCLLCEIGDVVELTKKRADEINEAGKLYFG
                     NEVELVNALKVGKTEAVSE"
     gene            2153..2548
                     /locus_tag="U1041_002127"
     CDS             2153..2548
                     /locus_tag="U1041_002127"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769203.1"
                     /translation="MNFLTFEEVVKILGSDRVTYESYSRFISKAEEVVDQLTNRYYQQ
                     HKLEDDPVKFRAKQFKKAICMQLIYFSDMETDTFEGLNREPEHISIGRTSISKSSGKT
                     GTGNSRTIPLVAQDVYGCLIGTGLLYRGI"
     gene            2550..2891
                     /locus_tag="U1041_002128"
     CDS             2550..2891
                     /locus_tag="U1041_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002313615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM4769204.1"
                     /translation="MRMPKPPIEILNETVGYLEYIGEGDYNKREYGDEQTIHHVRIDR
                     SSKYSWNGKSKEIQYKAVVLCYQGLTTPLPNFKEQSILRFDGVDHVIVNVIPNKEPFK
                     DVLYSVELEVL"
     gene            2891..3235
                     /locus_tag="U1041_002129"
     CDS             2891..3235
                     /locus_tag="U1041_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001017358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM4769205.1"
                     /translation="MSISIQVDLKGAKKKLSDHNIRRGRIAMSSQILLDSDLYVPNRE
                     GHLRPSGHMSRDGKEVSWNTVYARAQFYGKNGIVTFRKYTTPGTGKRWDEKAKAIHMT
                     DWVQRFVKGAGF"
     gene            3235..>3581
                     /locus_tag="U1041_002130"
     CDS             3235..>3581
                     /locus_tag="U1041_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010830628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM4769206.1"
                     /translation="MDFLHQLKNHINENLNLPFQMKIGYLDDQESLVVYTLPGSSVKR
                     VYYDGTRELTLNIEIAIKSKQGQLAEESLWQIASLLEVLEDLPSANESFELEDIEVTS
                     RPFMNEVHEQGWLV"
BASE COUNT         1174 a          636 c          842 g          929 t
ORIGIN      
        1 tgacaagctg tccaagaagt cttggtttag tcgtaaataa ggagaagtcg tagtaatacg
       61 gctttttctt ttgtctagaa gaaggagata agtgtgaaat accgtaaaaa accagtagcg
      121 attgaagcaa ttcaattttt tgacaaccca gaaacattgg ctaatctttc tgagttgggg
      181 ttagaccctg ttaatattga ttacgaaatc ccatcaatgc ctgtacttaa aattcccact
      241 ttagaaggga taatgacggc gattgagggc gattttatca tcaagggcgt gcaaggcgag
      301 ttttatccgt gtaaaccagg tatctttgcc gaaacttatg aaatcgcaga ataggaggtg
      361 cccacatctt gacagcagga aagactgcaa taattacata gcctaaccgt gtcgaattcg
      421 atgtggtttt ctttatgcct ttatccgcag gcgttaaaga acggaaatat aagcgaccaa
      481 tcgctgaata ttggaggata gccgaatggc agaagaacaa acagtagacc acgctaccga
      541 aaacgtggaa gaagtagctg aaaagacttt cagccaagaa gatgtcaatc gtgtgggtaa
      601 aaaagagcac aaaagtgggt atgctaaagc aattaaagac ctaggctttg ctgatgtaga
      661 atccgccaaa gaagctctga aagcttatga agattggcaa gagtcgcaaa aaactgaagc
      721 agataagcag acagaactac ttgcttcaaa agatagggaa ttggcatcag ttttagatgc
      781 gaataaacga cttgaagcca aactgtcagc tttgactcaa ggtgttaatg ctgactctgt
      841 tgacgatgtt attgctttat cggaacgttt agtcaatgaa gatacgacga tcgatgaagc
      901 aattaagcaa gttgtcggta aatatcctca atttgcaact gctccaaata ctaccgagaa
      961 gaaacctact tttacggtgg tagataaccc gagtgcaagc gcaaagacag atgtgtcaaa
     1021 agaccaattt aaggaaatga catatatgga gcgccttgaa ctcaagcaaa caaaccctaa
     1081 attatatgaa caactgaaag gaaactaata tggcaacagg attaacaaaa atggaacaaa
     1141 tgctagaccc tgaggttcta gcggatatga ttgatgcaga aatcgggaaa gctatccgat
     1201 ttgcaccact tgcagaagta gacacaacct tacaaggtca accaggtaca actttgaccg
     1261 tgccaaaatg ggactacatt ggcgatgcgg aagaagtcgc cgagggtgaa ccaattccag
     1321 ttactcaact tggttttaca aaaaccaaaa tgaccatcaa gaagattggt aagtctgtag
     1381 aaataacaga cgaagcgatt ctctctggct atggcgaccc agtaggtcaa gcggctaaac
     1441 aaatcgttca agctattgac cataaagtag acgcggacgt tttggtagct cttcaaggat
     1501 ctactcagac cgttacggca agtatcacgg tcgatggtct gtctaaagcg cttgatattt
     1561 tcaatgacga agatgataca ccaaccgttt tagttttgaa ccctgcagat gcttctgcat
     1621 tacgacttga tgcaggcaag acatggctat ctgcaacgga acttggtgca agtcgtatcg
     1681 tttctggggt gtatggtgaa attctagggg tgcagattgt acgttctcgt aaatgtccaa
     1741 aagggacagg tttcttggtc cgtgaaggcg ctctgaaaat tatgttgaaa cgtgaaacca
     1801 tggtggaaac tgaccgtgat aagaagcgct tgattaacgc tattattgcg aacaaacatt
     1861 acggtgtata cctttataag gctgaaaagg cagttaaaat cacgttcgct ccttctgtgt
     1921 aagaaaggag atgacggatg cctaaataca ctgtaaagaa agcttatata gataaggata
     1981 catgtcttct atgtgaaatc ggagacgttg tagaactgac aaaaaagcgc gccgatgaaa
     2041 ttaacgaggc aggaaagctc tatttcggaa atgaggtaga gcttgtcaat gccctcaaag
     2101 ttggtaaaac agaagcggtt tctgagtgat atagctagaa ggggtgaagg gcatgaattt
     2161 cttaaccttt gaagaagttg ttaaaatcct cggctctgat agagtcactt acgagagtta
     2221 tagtcgcttt atttctaaag ctgaggaagt tgttgatcag ttgacaaatc gatactatca
     2281 acaacataaa ctagaagatg accctgtaaa atttagagcc aagcagttta aaaaagccat
     2341 ctgtatgcaa ctgatttact tttccgatat ggaaacagat acctttgaag gattaaaccg
     2401 tgaaccggaa catatcagta ttggccgtac ttctatttca aaatcatccg gcaagacagg
     2461 aaccggtaat tctaggacaa taccgttagt agcgcaagat gtctatggct gtttaatagg
     2521 gaccggcttg ctctataggg ggatttgata tgagaatgcc aaagccacct atagaaatct
     2581 tgaatgaaac tgtcggctat ttggagtata tcggagaagg cgattataac aaacgagagt
     2641 atggtgatga acagacaatt caccatgttc gaatcgaccg ctcatcgaaa tattcttgga
     2701 acggaaagag caaggaaatc cagtataaag cagttgtgct atgttaccaa ggattgacta
     2761 ctccgttacc taatttcaaa gaacagtcaa tacttcgttt tgatggggtt gaccatgtta
     2821 tcgtcaatgt gattccaaat aaggaacctt ttaaagatgt gctatattca gtagaattgg
     2881 aggtactgta gtgtctattt cgattcaagt tgatttgaag ggggcaaaaa agaaattgag
     2941 cgaccacaat attcgtagag gacgcattgc gatgtctagc caaattttgc tagatagtga
     3001 cctatacgta cctaaccgag agggacattt gagaccttct gggcatatgt ctcgtgatgg
     3061 gaaagaggtg tcctggaaca cagtatatgc tagagcacag ttctacggta aaaatgggat
     3121 tgttactttc aggaagtata caacaccagg aaccggcaaa cgttgggacg aaaaagctaa
     3181 agcaatccac atgacggatt gggttcagcg ttttgtgaaa ggagcaggtt tctaatggac
     3241 tttcttcatc agcttaaaaa tcatattaac gaaaatctga atttgccctt tcaaatgaaa
     3301 atcgggtatt tagatgacca agaaagtttg gttgtctaca ctctgccagg tagctcggtg
     3361 aaaagggtat actacgatgg tacgagagaa ttaacactta atatcgagat tgcaattaag
     3421 tctaaacaag gtcaattagc tgaggaatct ctttggcaga tagcgagtct tttggaggtt
     3481 ctagaagacc tgcctagcgc taacgagagc tttgaattag aagatataga ggtgacgagt
     3541 cgtccgttta tgaatgaggt tcatgagcaa gggtggcttg t
//
LOCUS       DASFQS010000148         3498 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.152, whole genome shotgun sequence.
ACCESSION   DASFQS010000148 DASFQS010000000
VERSION     DASFQS010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.152"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            42..689
                     /locus_tag="U1041_002131"
     CDS             42..689
                     /locus_tag="U1041_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4769207.1"
                     /translation="MLSQSEIASIIGVNRTAFHNWEKGKSIPNQKNLTALAKILDVPV
                     TYFESEYNIVNNYLQLSPDNQIKAEDYVEDLLLSQQTSNVTPLFSVQVLSDVQLSAGL
                     GEGFFDEFETETVYSDEEQYGYDIAAWIEGDSMEPVYKSGEVALIRSNGFDYDGAVYA
                     LSWNDSVYIKKLYRDEDGFRMVSLNKDYPEKFIPYEDEPKIVGLVVGHFMPVEGV"
     gene            692..919
                     /locus_tag="U1041_002132"
     CDS             692..919
                     /locus_tag="U1041_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769208.1"
                     /translation="MKLKDILELGMYGFNPDCKVEIFNMDNFEERLENEGFDEILIPQ
                     NEDVTIYPYAFLIEDSILIAMTEEDDNTNAC"
     gene            1042..2457
                     /locus_tag="U1041_002133"
     CDS             1042..2457
                     /locus_tag="U1041_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003059255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HEM4769209.1"
                     /translation="MGYIDYSIEPQSDIAFLDMKSFYASVECVDRGLHPLYTSLCVMS
                     RADNSAGLILASSPMFKKVFGKANVGRSYDLPFDINTRKFSYQNAWKHGIEVTPKYKS
                     FIEHWAKRTLIVPPRMDRYIEKNLEIQHIFQDYAAPDDILPYSIDEGFIDLTSSLSYF
                     ISDKSMSRKVKLDNVSAMIQRDIYRKTGIISTVGMSNSNPLLAKLALDNEAKKTATMR
                     ANWSYQDVETKVWAIPKLTDFWGIGSKTEIHLHKLGIHSIKELANFNPDILKKEFGKV
                     GVQLWFHANGVDESNVHEPYKPKSRGLGNSQVLPRDYRTQREIEIVLAEMADQVANRL
                     RSAHKKATVVSIHIGYSRTEMKKSINAQKKIDPANLPKTMVGHVLELFRKKYTFGAVR
                     QIGVSYSGFVDENYTLLSLFDDVEQIEKENRLQTAIDVVREQFGFLAIQKGTVLTEGS
                     RNIERSKLIGGHSAGGLEGLK"
     gene            2454..2822
                     /locus_tag="U1041_002134"
     CDS             2454..2822
                     /locus_tag="U1041_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004254363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769210.1"
                     /translation="MIDRSYLPFQSAREYQDTKMQKWMGFFLSEHTSALSDDANKVTY
                     MSDLSLEKKLLLLSQVYAGQLNTRIHVVEKNKRVSYTGTIPSLNKNFILIKTTTGHIN
                     LKLKDIISIELVEEVHYESA"
     gene            2809..3108
                     /locus_tag="U1041_002135"
     CDS             2809..3108
                     /locus_tag="U1041_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769211.1"
                     /translation="MNQLEFQRNHLQMDYYSESYQDFERDFYRYSNMNIPLTFLTDDI
                     LKTMATSRKNYFVLNKEKARDNRDHFFIFDVSTVDENPLIYRYSYKSTTTYLSQK"
     gene            complement(3193..>3498)
                     /locus_tag="U1041_002136"
     CDS             complement(3193..>3498)
                     /locus_tag="U1041_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638150.1"
                     /note="catalyzes the reversible reaction of
                     dihydroxyacetone phosphate with glyceraldehyde 3-phosphate
                     to produce tagatose 1,6-bisphosphate; in Streptococcus
                     pyogenes there are two paralogs of tagatose-bisphosphate
                     aldolase, encoded by lacD1 and lacD2; expression of lacD1
                     is highly regulated by environmental conditions while
                     lacD2 specializes in an efficient utilization of
                     carbohydrate sources; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HEM4769212.1"
                     /translation="YTKEEAAEYFRQQEASTHLPYIYLSAGVSAKLFQDTLVFAHDSG
                     AKFNGVLCGRATWAGVVPVYIEQGEEAAREWLRTVGRENIESLDRVLSLTASSCAEG"
BASE COUNT         1141 a          690 c          655 g         1012 t
ORIGIN      
        1 tgttttcaaa agaacgactt aagcatcgaa gaaatgaaaa aatgttatca caatccgaaa
       61 ttgcttcaat aataggagtt aatagaacag cttttcataa ctgggaaaag ggaaaaagca
      121 tacctaacca aaaaaacctc actgccctcg ccaaaatcct agacgtccct gttacctatt
      181 ttgaatctga gtacaatatc gtcaataact atcttcagtt gtctcctgat aatcagataa
      241 aggcagagga ctatgtcgag gatcttctac tttctcaaca aacctctaac gtcactccac
      301 tcttctctgt acaagttcta tcagatgttc aactatctgc tggtcttgga gaaggattct
      361 ttgacgagtt tgagactgaa actgtctact cagatgagga gcaatacggt tacgacattg
      421 ctgcttggat tgagggagac tctatggagc ctgtctataa gagtggtgaa gttgcactta
      481 ttcgatccaa cggtttcgac tacgatgggg ctgtctatgc actatcttgg aatgactcag
      541 tttatatcaa aaagctctac cgtgatgagg atggatttag aatggtttcc ctgaataagg
      601 actatcctga gaagttcatc ccttatgaag atgagccaaa aattgttggt ctagttgtgg
      661 gacactttat gcctgtcgag ggagtgtagt catgaaatta aaagatattt tagaacttgg
      721 aatgtatggt ttcaaccctg attgtaaagt tgaaatattc aatatggaca actttgaaga
      781 gcgactagag aatgaaggat tcgatgaaat tcttattcct caaaatgaag acgtaacaat
      841 ctatccttac gcttttttga tagaagattc tattttgatt gctatgaccg aggaggacga
      901 caataccaat gcatgttaaa gaaatgattt acatcaaaga cgaacgtatt atcttcaccc
      961 ctgacaaatt cgaatacgac attactgact atatcggaga acttatcgaa gagcttgaaa
     1021 aactaaaaag gagataatcc catgggctat atcgactatt ctattgaacc tcaaagtgac
     1081 atagccttcc tcgatatgaa gtccttctac gcttcggtag aatgtgtgga tagaggttta
     1141 catccactct acacatcact gtgtgtcatg agccgtgcag acaactcggc aggattgatt
     1201 ctcgcttctt ctccaatgtt taagaaagtc ttcggaaaag caaatgtagg tcgttcctac
     1261 gacttgccat ttgatatcaa cactcgaaaa ttcagctatc aaaatgcatg gaaacatgga
     1321 attgaggtaa caccgaagta taaatcgttt attgaacact gggcaaagcg tacactcatc
     1381 gttcctcctc gaatggacag atatattgag aagaatctag agattcagca tatctttcaa
     1441 gactatgctg ctccagatga cattctcccc tattcaatcg atgagggctt tattgacctt
     1501 actagttcac tttcttactt tatttctgat aagtcaatgt caaggaaagt taagttagat
     1561 aatgtttcgg ctatgattca aagagatatt taccgtaaaa caggtattat ctcaactgtt
     1621 ggaatgagca attccaatcc tcttctagct aaactagctc tagataatga agctaagaaa
     1681 actgctacta tgagagctaa ctggtcatac caagatgtag aaaccaaggt atgggccatt
     1741 ccaaaattaa cagacttttg ggggattggt agtaaaaccg agattcattt acacaaactt
     1801 ggtattcatt caatcaaaga actggccaat ttcaatcctg atattctcaa aaaagaattc
     1861 ggtaaagtcg gtgttcaact ttggtttcac gccaatggag ttgatgaaag caatgtccat
     1921 gaaccctata aaccaaaatc acgaggattg ggtaactcac aagtactccc tcgagattat
     1981 agaacccaaa gagaaattga aatcgtatta gctgaaatgg ctgaccaggt tgctaaccgt
     2041 cttcgctcgg cacataagaa agccactgtc gtttccattc atattggcta ttctaggact
     2101 gagatgaaaa aatctataaa tgctcagaaa aaaattgacc ccgcaaatct cccaaaaaca
     2161 atggttggtc acgtactaga attattccga aagaaataca cctttggtgc agtgagacaa
     2221 attggtgtat cttatagtgg cttcgtagat gaaaactata cactactatc actctttgat
     2281 gatgtagaac aaattgaaaa agaaaataga cttcagacag caatcgatgt tgtcagagag
     2341 cagtttggtt ttttggccat acaaaaagga accgtcctaa ctgaaggttc cagaaatatt
     2401 gaacgtagta aacttatcgg cggtcattcc gctggtggat tggagggatt aaaatgattg
     2461 atcgttcata cttaccattt caatcagcac gagagtacca agatacaaag atgcaaaaat
     2521 ggatgggctt tttcctatct gagcatacgt ctgctctttc tgacgatgca aacaaagtaa
     2581 cgtacatgtc tgatttatca ctagagaaga aattattact cctcagtcaa gtgtacgctg
     2641 ggcaactgaa cacccgcatt catgtcgttg agaaaaacaa gcgcgtttcc tacactggga
     2701 caataccaag tctgaacaaa aatttcattt tgattaaaac tacaacaggt cacatcaatt
     2761 tgaaattgaa agacattatt agtattgaac ttgtagagga ggtccactat gaatcagctt
     2821 gaatttcagc gtaatcacct gcaaatggac tattacagcg agagctatca agattttgaa
     2881 cgtgacttct accgctactc caatatgaat attccattga ccttcttgac cgatgatatc
     2941 ctcaaaacaa tggcaacttc tcgtaagaat tactttgtcc taaataagga aaaggctaga
     3001 gataatcgtg atcacttctt cattttcgac gtaagcaccg tagatgagaa tccactaatc
     3061 taccgctatt cttacaagag tacaacaact tacttatcac aaaaatagga gctcataaac
     3121 tgctcctatt ttctttagac atggattcta gttttttaaa atactaagaa atttttccta
     3181 gaatagttct atctatccct ccgcacaaga actagcagta agagataata ctctgtctaa
     3241 gctctcaata ttttcacgac caacagttcg taaccattct cgtgctgctt cttcaccttg
     3301 ctcaatataa acaggcacaa ctccagccca tgttgcacga ccgcataata caccattaaa
     3361 tttagctcct gaatcatgag caaacactag tgtatcttgg aagagttttg cagaaacacc
     3421 tgcgcttaga taaatgtatg gcaaatgagt tgatgcttct tgttgacgga aatattcggc
     3481 tgcttcttct tttgtata
//
LOCUS       DASFQS010000149         3465 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.153, whole genome shotgun sequence.
ACCESSION   DASFQS010000149 DASFQS010000000
VERSION     DASFQS010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3465
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.153"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            52..3171
                     /locus_tag="U1041_002137"
     CDS             52..3171
                     /locus_tag="U1041_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004186360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEM4769213.1"
                     /translation="MAGNIKGITIEIGGDTQPLQDALKGVNKQASEATKELRQIDKAL
                     KFDTGNVTLLAQKQEVLAKQVETTREKLATLRQAQAQVEAQFKAGSIGADQYRAFQRE
                     LETTKNVLTSYEGKLASVTRTISENGSQVDSNKAKLQALQAEQAQLVSESEKLTSSIK
                     LQESALSSNASESDKLALAHQKVTGHSEILERQIQNIEKQLELTKSEFGDQSIEANKL
                     EKTLNETKVAYNHLQNEMEEMASSSDGAKSSLSETNQLLKADLLMEFGDQISELSQKL
                     VDFGKQSLDAFLEIDEGMDVIVTKTGATGAALDEMTDMAKQLATEIPTDFNTAGTAVG
                     LLNTQFDLTGDALKSASTQLIQFSEINGSDVSSSAISAKQAIEAYGLQASDLARVLDT
                     VTYTSQETGVGVQELMDKAVAGAPQIKSLGLSFDDGVTLMGRFEKAGVDSSAALSSLS
                     KAAVAYAKDGLTLKDGLAGTVEQIKQSTSETEALSLASEIFGSKAAPRMVDAIKRGAL
                     TFEDLAGTAEKAAGIVTQTYEGTLDPIDQFTTAQNSAKLAMGEIGDAIASTLAPVLQI
                     LAELLQQVATWFSGLSEPIKQFLVIVGLLVAGFGLLLPVFLALQAAAMAMGTTIVGLL
                     TAAAPIVGMVLGIIAVIALLVVGIGQLWQHNEGFRTAVLEIWTAISSFISTVIQEVSS
                     FIMSIWGTLTTWWSENQQLILDAANTVWNAISTVITSVMTILGPLIQASWENIKLIIT
                     TAWDMIKIVVETAINVVLGIIKAVMQVITGDWAGAWETIKQVLSTVWEGITSLISLAL
                     NFIAQYISTAWSGIKNTISNVLSAISSAISSIWSAIQSTISNVLSAIGATVSNSWNGI
                     RSTVSNVLTGISNTVSSVWNGVKNTISSAINGARDAVSNAINAIKNLFNFQIRWPHIP
                     LPHFRVSGSANPLDWLKGGIPRISIDWYAKGGILTKPTAFGVNGNSLMVGGEAGKEAV
                     LPLNEQTLGAIGRGIAKTMTSNLPTIHITITGNTVREETDLHRLAEMVGEKLVYELER
                     QQGLRGVKP"
     gene            3168..>3465
                     /locus_tag="U1041_002138"
     CDS             3168..>3465
                     /locus_tag="U1041_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769214.1"
                     /translation="MIRHNALTIDGVSTASLPFKVIVEDSPSITVSESKTQLIEHQGL
                     SGAVLQTNPRRRFMELSYTLYLVKPSEEQLFSFLKLFLKEEFWLENASFKTIRFW"
BASE COUNT         1061 a          686 c          796 g          922 t
ORIGIN      
        1 cgagcaactc aggctgattt tgataatttc tgagggtaga aaggagggac tatggctgga
       61 aacataaagg gaattacgat tgaaattggt ggcgacactc agcccttgca ggatgcccta
      121 aagggtgtaa acaaacaagc atctgaagct accaaagaac taagacagat tgataaggct
      181 ctcaagtttg atacaggcaa tgtcaccctc cttgctcaaa aacaggaagt attagctaaa
      241 caagttgaaa ccactcggga aaagctagca acattaaggc aagcacaagc tcaggttgaa
      301 gctcagttta aggcaggtag tattggggca gaccagtaca gagcctttca acgggagctt
      361 gaaaccacca aaaatgttct gactagttat gagggtaaac tagcaagtgt cacacgtacc
      421 atttctgaaa acggcagtca ggttgatagt aataaggcta aactacaagc acttcaggca
      481 gaacaggctc aattagtatc tgagagtgag aagttaacaa gttctattaa gcttcaagaa
      541 tcagctctta gctcaaacgc aagtgagtcc gataagctag cacttgccca tcaaaaggtg
      601 actgggcatt cagagatact ggagagacag attcaaaata tagagaaaca actggaacta
      661 acaaagagtg aatttggtga tcagtcaatc gaagccaata agcttgagaa aacactcaat
      721 gaaaccaagg tagcctacaa ccatcttcaa aatgagatgg aggaaatggc atctagttca
      781 gatggtgcga agtccagtct ctctgaaacc aatcagctac ttaaagctga cctcctaatg
      841 gagtttggtg accaaattag tgaattatct cagaaactag ttgattttgg gaaacaatcc
      901 ttggatgcct ttcttgagat agatgaaggg atggacgtga ttgtcacaaa gacaggggca
      961 actggagctg cccttgacga gatgacagat atggctaaac agcttgcgac agaaataccg
     1021 accgatttca ataccgcagg aactgcagtt ggtttattga atacgcaatt cgatttaaca
     1081 ggcgatgccc taaaatcagc atccactcaa ctgattcagt tctcagaaat caatggtagt
     1141 gatgtttcaa gttcagctat ttctgcaaaa caagccattg aagcgtatgg cttacaggct
     1201 agtgatttgg caagagttct tgatacagtc acatacacaa gtcaagaaac tggagttggt
     1261 gttcaagaat tgatggataa ggctgttgct ggtgcacctc aaataaaatc actcggtttg
     1321 tcatttgatg atggtgtgac gcttatgggt cggtttgaga aagcaggggt tgactcatct
     1381 gcggctctct cttctttatc caaagcagct gtggcatatg ccaaagatgg cttaactcta
     1441 aaagacggtt tggctggtac ggttgaacaa atcaaacaat caaccagtga aacagaagcc
     1501 ctatcgttgg catcagagat atttggcagt aaagctgctc cacgaatggt tgatgccatt
     1561 aaacgaggag ctttaacatt tgaagaccta gcaggaacag cagaaaaagc tgcaggtatc
     1621 gtcactcaaa cctacgaagg tacgcttgat ccaattgacc agttcacaac agctcaaaat
     1681 agtgccaaat tggcaatggg agagattggc gatgccattg cctcaacact tgctccagta
     1741 cttcaaatct tggcggagtt attgcagcag gttgcgacat ggttttctgg tctttcagaa
     1801 ccgataaaac agttcttggt aattgtcgga cttttagttg ctggttttgg cttattactc
     1861 ccagtttttc ttgcccttca agctgccgct atggctatgg gaacaaccat tgtcggctta
     1921 ctaactgcag cagctcccat agtaggtatg gttttaggaa taattgcggt tatagccctc
     1981 ttggttgttg ggatagggca gctctggcaa cataacgaag gatttcggac ggctgttctg
     2041 gaaatatgga cggctatctc cagctttata tcgaccgtca ttcaagaagt ttcaagtttt
     2101 attatgtcca tttgggggac gcttactact tggtggagtg aaaaccaaca actgattctc
     2161 gatgcagcaa acacagtatg gaatgccatt tcaacagtca tcacttcagt catgacaatt
     2221 cttggaccat tgattcaagc tagttgggaa aatatcaaac tcattatcac aaccgcatgg
     2281 gacatgataa agatagtggt tgaaacagct atcaatgtgg tacttggtat catcaaggca
     2341 gtcatgcagg ttatcactgg tgattgggcg ggtgcttggg aaacgattaa gcaggtgcta
     2401 tcaacagttt gggagggaat tacatccctt atttctttag cattaaactt cattgcccaa
     2461 tatatttcaa ctgcttggtc gggtattaag aataccatct caaatgtact ttctgccata
     2521 agttctgcca tttcatctat ctggtcggct attcaatcca caatatccaa tgtcctatct
     2581 gcgattggtg caactgtttc aaatagttgg aatggtatcc gtagcacggt gtctaatgtc
     2641 ttgaccggta tctcaaatac ggtttcatct gtttggaatg gtgtgaaaaa tactatttca
     2701 agtgcgatca atggtgcaag agatgccgtg agtaatgcca tcaatgccat taaaaatctc
     2761 tttaatttcc aaatcagatg gccacatatc ccccttcctc attttcgagt gtcaggctca
     2821 gccaatccac tcgattggtt aaagggtgga atcccaagaa tctccattga ttggtatgcc
     2881 aaaggaggaa ttttaaccaa accaaccgca tttggtgtaa acggcaatag cctaatggta
     2941 gggggtgagg ctggaaaaga agctgtcttg cctttgaatg aacaaacatt gggtgcgatt
     3001 ggtcgaggaa ttgcaaagac catgacaagc aatctaccaa ccattcacat cactattaca
     3061 ggtaacacag taagagaaga gactgacctt caccgactag cggagatggt gggagagaaa
     3121 ctcgtttatg aattagaacg tcagcaagga ttgagaggag tgaaaccatg attagacaca
     3181 atgcattaac cattgatgga gtgtcaacgg ctagtttgcc ttttaaggta atcgtggaag
     3241 atagcccttc tatcacagta agtgaaagta agacgcaatt gattgaacac caaggtctgt
     3301 caggtgcggt tcttcaaacc aatcctcgca gaagattcat ggaactgagc tacaccctct
     3361 atcttgttaa acctagtgaa gaacagctat tttccttttt gaagctattt ttgaaagaag
     3421 aattttggct tgagaacgct agtttcaaga ccatacgctt ttggt
//
LOCUS       DASFQS010000150         3463 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.154, whole genome shotgun sequence.
ACCESSION   DASFQS010000150 DASFQS010000000
VERSION     DASFQS010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3463
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.154"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            452..1936
                     /gene="lsa(E)"
                     /locus_tag="U1041_002139"
                     /gene_synonym="lsaE"
     CDS             452..1936
                     /gene="lsa(E)"
                     /locus_tag="U1041_002139"
                     /gene_synonym="lsaE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002294513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein Lsa(E)"
                     /protein_id="HEM4769215.1"
                     /translation="MSLINVSNLTFSYEGSYDNIFENVSFQIDTDWKLGFIGRNGRGK
                     TTFLNLLLGKYAYSGNISSTVKFECFPYDVEDKSLYTIEVMKSICTECMDWEIFREIS
                     LLDVQEDVLYRPFNTLSNGEQTKVLLASLFLTTSCFLLIDEPTNHLDLDARNVVQNYL
                     KRKKGFILVSHDRSLLDQCVDHILSINKTNIEIQKGNFTSWWENKALQDNFELAENKK
                     LLKEIGRLSYAAKRSSNWSNKVEKSKYGTTNSGSKLDKGYVGHKAAKAMKRAKNIESR
                     HQEAVSQKSELLHNIEQYDDLKISPLEFHKECLIEANDLSLSYGDKEVCSNLNFRINI
                     GDRVAIIGKNGSGKSSILKLINGDDIKFTGNFILASGLKISYISQDTSYLKGNLSEFA
                     YNNKIDETLFKTILRKLDFNREQFDKNVEDFSAGQKKKVLIAKSLCESAHLYIWDEPL
                     NYIDIFSRIQIEKMILEYCPTLLFVEHDDAFCNNICTKNINLCL"
     gene            1990..2793
                     /gene="lnu(B)"
                     /locus_tag="U1041_002140"
     CDS             1990..2793
                     /gene="lnu(B)"
                     /locus_tag="U1041_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002294514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lincosamide nucleotidyltransferase Lnu(B)"
                     /protein_id="HEM4769216.1"
                     /translation="MLKQKELIANVKNLTESDERITACMMYGSFTKGEGDQYSDIEFY
                     IFLKDSITSNFDSSNWLFDVAQYLMLYKNEYGTEVVIFDNLIRGEFHFLSEKDMNIIP
                     SFKDSGYIPDMKDMLIYDETGQLENYLLEISGARPNRLTEENANFLLCDFSNLWLMGI
                     NVLKRGEYARSLELLSQLQKNILQLIRMVEKNADNWLNMSKNLEKEISLENYKKFAKT
                     TARLDKVELFEAYKNSLLLVIDLRSHLLEQYNLKVTHDILERLLNYISE"
     gene            complement(2978..3235)
                     /locus_tag="U1041_002141"
                     /pseudo
     CDS             complement(2978..3235)
                     /locus_tag="U1041_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006149971.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
BASE COUNT         1235 a          483 c          643 g         1102 t
ORIGIN      
        1 tttagaaaaa aacagaaaaa tcacaaaagc agaaaaatta tattggattt ttgaagataa
       61 tatgatataa taaaaagact tggaggtgga agaatgtata acttttcttg ctaattatat
      121 gatgcataat aagatattta aagaaacgga tatagaaccg tttgttttgt tgtgcaaatt
      181 gcaagaaagt taagtattcg acactcaata atacattaca gtaaccttat atattacaaa
      241 aggtaataat agtatttgtt tttgagccgt aagaatttac tttcttgcgg cttttaatat
      301 ttgtaaaaga aaggaagata aatgtgatag acaataacac tatgccatcc atgacaaaat
      361 ccatgcagag ttggataaca ttgtagagta attaatgccg aaaaccaact ttgcttataa
      421 aatttttata atgtaaagga ggaagaaata catgtcttta ataaatgttt caaatctaac
      481 tttttcatat gaaggaagtt atgacaatat ttttgaaaat gtaagttttc agatagatac
      541 agattggaaa ctcggtttta ttggaagaaa cggacgcgga aaaactactt tcttaaattt
      601 attgcttggc aaatatgcgt attccggcaa tataagttct acagttaagt ttgagtgttt
      661 tccttacgat gtggaagata agagtctata tacaattgaa gtaatgaaga gtatttgtac
      721 ggaatgtatg gattgggaga tttttcgtga aatatcattg cttgatgttc aagaagatgt
      781 tttatatcgt ccgtttaata cactgtcaaa tggtgagcag acaaaggtcc ttcttgcatc
      841 tttattcctt acaacgagtt gtttcctgct tattgatgaa cctacaaacc atcttgacct
      901 cgatgcacgt aatgtagtgc aaaactattt gaaacgcaag aaggggttta ttttggtatc
      961 tcatgatagg agtctacttg atcaatgtgt tgaccatata ctatctatca ataaaacgaa
     1021 tatcgaaatc caaaaaggaa actttacttc ttggtgggaa aacaaagcgt tacaagataa
     1081 ttttgaactg gcggaaaaca agaaactcct taaagaaata ggaaggttgt cttatgcagc
     1141 aaaacgtagt tcaaattggt caaataaagt agaaaaaagt aaatatggaa caacaaattc
     1201 tggctcaaaa ctggataagg gctatgttgg acataaagct gcaaaagcga tgaaacgtgc
     1261 caaaaatatt gagtcaagac atcaggaagc tgtttcacaa aaatcagagc tgctccacaa
     1321 tatcgaacaa tatgacgact taaaaatttc gccacttgaa tttcacaaag agtgcctaat
     1381 agaagcgaat gatttatcat tgtcttatgg agataaagaa gtatgcagta atcttaattt
     1441 cagaatcaat attggtgata gagttgccat tatcggaaaa aatgggagtg gtaagtctag
     1501 tatcctaaaa ttgattaatg gagatgatat taaatttacc ggaaatttta ttttagcaag
     1561 tggactaaaa atttcttata tttcgcaaga tacttcatat ttaaaaggta atctatctga
     1621 gtttgcctat aataataaga ttgacgaaac tttatttaaa acgattcttc gtaaactgga
     1681 ttttaataga gaacagtttg ataagaacgt ggaggatttt agtgctggtc agaaaaagaa
     1741 agtactaatt gctaaaagcc tgtgtgaaag tgcacatttg tatatatggg atgagccatt
     1801 gaactatatt gatatttttt cacgtatcca aattgaaaaa atgattttag aatattgtcc
     1861 tacactattg tttgtggagc atgatgatgc tttttgcaat aatatttgta cgaaaaatat
     1921 caatttatgt ctatagagat tttgagttgc cacaataact aaaagatatt tagatgaaag
     1981 ggtgaagaaa tgttaaaaca aaaagaatta attgcaaatg ttaagaatct tactgagtca
     2041 gatgaacgaa ttacagcttg tatgatgtat ggatcgttta ccaaaggaga aggtgaccaa
     2101 tactcggata tagagttcta tatatttttg aaagatagca taacctcgaa ctttgattca
     2161 tccaactggt tgtttgacgt agctcagtac ttgatgcttt ataaaaatga gtatggaaca
     2221 gaggtagtta tttttgataa tcttatacgt ggggaatttc atttcctttc tgaaaaagat
     2281 atgaacataa tcccctcgtt taaagattca ggttatattc ctgatatgaa ggatatgctt
     2341 atttacgatg aaacagggca attagaaaat tatttattag agataagtgg tgcaagacca
     2401 aatagactta ctgaagaaaa tgctaatttc ttgttgtgtg atttctctaa tctatggttg
     2461 atgggaatca atgttctaaa aagaggagaa tatgctcgtt ctttagaact cttatcacag
     2521 cttcaaaaaa atatactaca acttatacgt atggtagaaa aaaatgcgga taattggcta
     2581 aatatgagta agaaccttga aaaagaaatt agccttgaaa attataaaaa gtttgcaaag
     2641 accactgctc gattagataa ggtagaatta tttgaagcct ataaaaattc cttactgtta
     2701 gttatagatt tgcgaagtca ccttcttgaa caatacaact taaaagttac acatgatatt
     2761 ttagaaagat tgttgaatta cattagtgaa tagaagagta acgttattta gagcattggt
     2821 tactaagaat taacagtata cctcggtttt caaaaaacag cgaagtctat ggatatgttc
     2881 ccacatacgc aagccctcag tggatatctt ccctcaaaga caataatgtt caagtgacta
     2941 atttttgaca gctatcccct catctcaaaa cattttgata gctgaatttt cgagtgttaa
     3001 tgtcaaatgg taagtcgtag gaacggccta cgttcgcttt gccgaatact ttcttaaaca
     3061 taggggatga agcgagtatt aatcctgctg agttatccgc tcggctcatg acgcatagtg
     3121 atgtgtagag cggatgcagt cctctatcca cacattcaac agaagcgtaa aaggacttca
     3181 tatcgaggaa agctatgtca ctttgaggtt ctatagaata gtcgatatag cccataaggt
     3241 tatctccgtt tgagtttctc tagctcttct attaactcac cgatgtaatc agtaatgtcg
     3301 tattcgaatt tgtcgggagt aaagataata cgttcgtcct ttatgtaaat catttcttta
     3361 acgttcattg gtattgtcat cctcctcggt catagcaatc aaaatagaat cctctatcaa
     3421 aaaagcaaaa ggatagattt ttgcattctc attttgagga ata
//
LOCUS       DASFQS010000151         3450 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.155, whole genome shotgun sequence.
ACCESSION   DASFQS010000151 DASFQS010000000
VERSION     DASFQS010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3450
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.155"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(143..691)
                     /locus_tag="U1041_002142"
     CDS             complement(143..691)
                     /locus_tag="U1041_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HEM4769217.1"
                     /translation="MTTKVITGPNTRFSYLNANEPKSINGSTPKYSASLIIPKDDTVT
                     INKIKAAIEQAYKDGESKLKGNGKSVPALSTLKTPLRDGDLERPDDEAYKNAYFVNAN
                     SPHKPGVVDGNRQEIIDTSELYSGIYGRASITFYAFNSNGNKGIACGLNNLQKLRDGE
                     PLGGRTRAEDDFATEDDDDFLN"
     gene            complement(696..1817)
                     /locus_tag="U1041_002143"
     CDS             complement(696..1817)
                     /locus_tag="U1041_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HEM4769218.1"
                     /translation="MTNHATLSASASHRWLNCPPSVRLTEDLPDTTSDFALEGTDAHE
                     LCAYLVEKALGRNARDPTDNLAFYNDEMQECAEEYRNYVMEQVEKAKGYSRDPTVLIE
                     QRLDFSKWVPEGFGTGDCLIVADGLLQVIDYKHGLGVLVDADHNPQMMCYALGALEMF
                     DGLYDFDKVTLTIFQPRKHNISTFEMEKAELLEWAENVLAPKAELAFKGKGEMQSGKH
                     CQFCKLKNVCRKRAEDNLALAKMEFANPATLDNEDIAEILPKVDLLISWANDIKAYAL
                     KEATDGHPIPGYKLVEGRSVRKFSDEAAVSQAVMEAGFDPYEKKLLTITAMSKLLGKK
                     TFNDLLGDLIVKPSGKPTLVPIDDSRQEMNLAKNEFKED"
     gene            complement(1810..2133)
                     /locus_tag="U1041_002144"
     CDS             complement(1810..2133)
                     /locus_tag="U1041_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000077671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769219.1"
                     /translation="MSKMKELNRLIHDMEETAKYYLRLVDEFKKLLSSEEETVTKPDQ
                     SKPEPQKKIQLEDVRAVLATKAKDGYKNEVRALLNAYGASSLSALDPKHFAAVLEEAG
                     GIGND"
     gene            2493..>3450
                     /locus_tag="U1041_002145"
     CDS             2493..>3450
                     /locus_tag="U1041_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primase C-terminal domain-containing protein"
                     /protein_id="HEM4769220.1"
                     /translation="MQFTLSHSGQTGVQTTTVYPNQVTITDKISLQTVAQFDHVAGLF
                     LNNARSNTNFIKSDVLVMDIDNDHSENSDEWITVVRLKDIFSDYNFALVTSRSHMQAK
                     AGKTPRPKYHIYFQINEVTDKAIYVAMKEELCNQYKFFDDHAKDAARFFFGNPQAEVV
                     WHDSWLTIDEDMFQAVSIDDEEDFDADFYTPPSGPIQQGSRNSTMSVFAAKILKRLGV
                     TQEARDGFDEQAQKCVPPLDQAELDTIWGSAIRFYNRTIKTSKGYVSPDAFNRETLKP
                     DDYSDVGEAGVLAREYANRLAYTNATDYLYYDGTHWRENKQLA"
BASE COUNT          961 a          693 c          724 g         1072 t
ORIGIN      
        1 tattttgctt cgcctttcgt tccatttcat ttcgaatgtc atttctaatg gtcatatatc
       61 caaagtatag tgctattaac acccaaattc ccattaaagt acaagttaaa atagtataca
      121 tcatcaatct aattctccat ttctagttca aaaagtcatc atcgtcttca gtcgcaaaat
      181 catcctcagc acgagtgcgt cctccgaggg gttcaccatc acgcaatttt tgcaagttat
      241 tcaaaccgca agcaatacct ttgttgccat ttgaattgaa agcatagaag gtaatagaag
      301 cacgaccata gataccagag tataattctg aagtatcaat gatttcttga cgattgccat
      361 caacgactcc aggtttgtgt ggcgagttgg catttacgaa gtaggcattt ttgtatgctt
      421 catcatcagg gcgttcaagg tcaccatctc gtaggggagt tttcagagta gataatgcag
      481 gtactgattt gccattgcct ttgagttttg actcaccgtc tttatatgct tgctcaatag
      541 cagccttgat tttgttaatg gtgactgtat catctttagg gatgatgaga gaggcactat
      601 acttgggagt gctaccattg atagattttg gctcgttggc atttaagtag ctgaagcgag
      661 tgtttggtcc tgtaattact ttagttgtca tttagttaat cctctttaaa ttcatttttt
      721 gctaggttca tctcttgacg gctgtcgtca attggaacga gtgttggttt gccacttggt
      781 tttacaatca gatcaccaag caggtcatta aaggttttct tgccaaggag tttggacatg
      841 gcggtgatag tcaagagttt tttctcgtaa ggatcaaagc cagcttccat cacagcttga
      901 ctgacggcag cttcatctga gaatttacga acagagcgac cttcaaccag tttgtatcct
      961 gggataggat gtccatctgt agcttctttc aaagcgtagg ctttgatgtc gtttgcccat
     1021 gaaatcaaca ggtctacttt aggtaatatt tcagcgatat cctcgttatc aagggtggct
     1081 ggattcgcaa actccatctt ggctaatgcc aaattatcct cagcacgttt gcgacagaca
     1141 ttcttgagtt tacagaattg gcagtgttta ccagactgca tctccccctt acctttgaaa
     1201 gcaagttcag cttttggagc gagtacgttt tcagcccatt caagcaactc agctttttcc
     1261 atctcaaagg tagaaatgtt atgttttcgt ggttgaaata ttgtcagagt taccttatca
     1321 aaatcataaa gaccgtcaaa catctcaaga gcaccaagtg cataacacat catttgaggg
     1381 ttgtggtctg catcaactag aacaccaagc ccgtgcttgt aatcaattac ctgaagaagt
     1441 ccgtctgcca cgatgaggca atccccagtt ccaaagcctt caggcaccca tttggaaaag
     1501 tcaagtcgtt gttcgataag aactgtgggg tcacgagagt agcctttggc tttctcaact
     1561 tgttccatga catagttgcg atattcttct gcacattcct gcatttcatc gttataaaat
     1621 gctaaattat cagttggatc acgcgcgttc ctacccaagg ctttctcgac tagataagca
     1681 cacaactcgt gagcatccgt accttcaaga gcgaaatcag aagttgtgtc tggtaaatct
     1741 tcggtgaggc gaacagatgg tgggcagttc aaccatcggt gtgaagcaga ggcggatagt
     1801 gtggcatgat tagtcattac caatccctcc agcttcttca agtactgccg caaagtgttt
     1861 tggatcaagt gctgagagtg aagaagcacc gtaagcattt agaagagcac gaacctcgtt
     1921 cttatagcca tcttttgctt tcgtggcaag tacagcacgg acatcctcca attgaatttt
     1981 cttttgtggt tctggtttag attgatcagg ttttgttacc gtttcctcct cagaagagag
     2041 gagtttcttg aattcatcta ccaatcgaag gtagtacttt gcggtttctt ccatatcatg
     2101 aattagtcta ttcagttctt tcattttgct cattgttttc ttcctccata atttttctag
     2161 cgagtagttt tgagatgacg ctgatggcga taagtgtgtc tgtcaagtct tcttggtctt
     2221 gacagttttt tatgttttcc atagaaagtc ctcctttagg tttgtttggg ttatctcgcc
     2281 cttacaccta ctagggggac tttttggcgt tttagtctaa acaatttcaa aaaaaatcat
     2341 aaaaaaagtg agcgatggag tatcactcat gagttattta ttgaagaaaa aaattttttc
     2401 aaattttctg gactaaatcg atcaaaattc cccctagtag gtaggaaggg aaaccttcgc
     2461 agattatttt cctaaatgga ggccatgatt ttatgcaatt taccttatct cattctggac
     2521 agactggggt tcagacaacc acggtctatc ccaatcaagt aactattaca gataaaatat
     2581 cgctacaaac tgttgcgcaa ttcgaccatg tggcggggct gtttttaaac aatgcacgct
     2641 caaataccaa tttcattaag tcggatgttt tagtcatgga tattgataac gaccattctg
     2701 aaaattcaga tgagtggata actgtagtgc gattaaaaga catcttttcg gattacaatt
     2761 ttgccttggt caccagtaga agtcatatgc aggcaaaggc aggaaaaact ccaagaccaa
     2821 aatatcatat ttacttccaa atcaatgagg taactgataa agccatctat gtagctatga
     2881 aggaagaact ctgtaatcag tacaagtttt ttgatgatca tgccaaagat gcggcacgtt
     2941 tcttctttgg aaatccgcaa gcagaggtag tttggcatga ttcatggcta actattgatg
     3001 aagatatgtt tcaagctgtt tctattgatg acgaggaaga tttcgatgcg gacttctata
     3061 ctcctccaag cggaccaatc cagcaaggaa gtcgtaattc aacgatgtca gtttttgccg
     3121 cgaaaattct caaacggtta ggagtgaccc aagaagcaag ggatggattt gatgagcagg
     3181 ctcagaaatg tgtaccgcca cttgatcaag cagagttaga taccatttgg ggtagtgcta
     3241 tccgattcta caacagaact ataaaaacat ctaaaggtta tgtgtcccca gatgctttta
     3301 atagagaaac attaaaacca gatgattact cggatgttgg agaagcggga gttcttgcaa
     3361 gagagtatgc gaacaggctc gcttatacca atgcaacgga ttatctttac tatgacggaa
     3421 ctcactggcg tgagaacaag cagttggcat
//
LOCUS       DASFQS010000152         3431 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.156, whole genome shotgun sequence.
ACCESSION   DASFQS010000152 DASFQS010000000
VERSION     DASFQS010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.156"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..516
                     /locus_tag="U1041_002146"
     CDS             <1..516
                     /locus_tag="U1041_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4769221.1"
                     /translation="LSNGAVYSDDHTVVPLHEQKLDALEDILESANGEPVLVAYWFKH
                     DLARITGRLEKLKVTSRVLKTEEDIREWNKGNVPVGLIHPAGAGHGLNLQKGGHHLVW
                     FGLTWSLELYQQTNARLWRQGQEAETVVIQHIVTEGTIDEEILKALENKDAQQERLIE
                     AVKAQVGGADG"
     gene            509..985
                     /locus_tag="U1041_002147"
     CDS             509..985
                     /locus_tag="U1041_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769222.1"
                     /translation="MDKAEHILMHYNELKSDLEMLKYRLDHFKPVTENEVIGSLVFEK
                     SDEPRVKSTPTNRRSEMIALNFREKMIQENEEQLADLSQRYIRLANDLENFEMALKFL
                     KGDLYDFAQSMLKTDSNWDSLMREFHISRSTVRNWRRKVLDHVREVYLKMGFSLEK"
     gene            1191..1373
                     /locus_tag="U1041_002148"
     CDS             1191..1373
                     /locus_tag="U1041_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769223.1"
                     /translation="MTKRQEEKLNALLTDIAKEELLVETLEKRWSDNLDFYDVSVWGI
                     KRALERVYEAGRQSVK"
     gene            1418..2455
                     /locus_tag="U1041_002149"
     CDS             1418..2455
                     /locus_tag="U1041_002149"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEM4769224.1"
                     /translation="MIISSEQVSVGHPDKICDQISDAILTECLKYDKSSRVAVETLIK
                     DNHVVVAGEISTRHYFNLENIVRQVIEPLGMKNVRVTNLLGLQSSDIAKGVDNGGAGD
                     QGMMFGYATDETPEYLPLPYVLATRVLEKLISLGHPLLGKDAKAQVSYDYEKKRIDTF
                     LVSIQHTETADLAKVKRIVTEAMMSVAHRYRQNLDFNVLVNPTGRFVLGGSFADAGVT
                     GRKIVADTYGGFAHHGGGAFSGKDPSKVDRSAAYMARKIAKDIVREGYAKRCEVQLAY
                     AIGVAEPVSVYVETFGTSRYTTQQLEGMIRERYDLTPRGIIKELHLLNVDYTKTSCFG
                     HFTKDYLPWEK"
     gene            2457..2822
                     /locus_tag="U1041_002150"
     CDS             2457..2822
                     /locus_tag="U1041_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEM4769225.1"
                     /translation="MPRRPSTPCKHNGCPNLVPYGQKYCDNHKANHQLDAKSTTAKGY
                     NAQWNKARLRYLKVHPLCVQCNAKGRLTKATVVDHITPHRGDQKLFWDQSNWQALCKS
                     CHDRKTKTTDRYVEYSYRF"
     gene            3121..>3431
                     /locus_tag="U1041_002151"
     CDS             3121..>3431
                     /locus_tag="U1041_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4769226.1"
                     /translation="MDESQRKQIWKMRAEGLGYGLIGKATGLSRDSVKKYCKRNPALL
                     GHGAATKQMAKADQNDGLRCPQCYQTLKIHKIGRPKKFCSDKCRKVWWATHSDEHDKS
                     KT"
BASE COUNT         1098 a          659 c          777 g          897 t
ORIGIN      
        1 ttatccaatg gtgctgtata ctctgatgat catacagtcg tgccgcttca tgaacagaaa
       61 ctagatgccc ttgaagatat ccttgaatcc gcaaatggag aacctgtctt agttgcctat
      121 tggttcaaac atgacttggc tcggattacg ggtcgtttag aaaaactcaa ggtaacgagt
      181 cgggtgttga aaacagaaga agatattcgt gaatggaata agggcaatgt accagttggc
      241 ttaattcatc cagctggagc aggtcatggg ttgaacctcc aaaaaggtgg tcaccacttg
      301 gtctggtttg gattaacgtg gtctttggaa ttataccaac aaaccaatgc acgactttgg
      361 cgtcaaggcc aggaggctga gacagttgtt attcaacaca ttgtgactga aggaacgatt
      421 gatgaggaaa tcctgaaggc actagaaaac aaagatgcac aacaagaacg gctaattgaa
      481 gctgttaaag cacaagtagg aggggcagat ggataaggca gagcacattc tgatgcatta
      541 caatgaactc aaaagtgact tggagatgtt aaagtatcgt ttggatcatt tcaaaccagt
      601 gacagaaaat gaggttattg gttcgcttgt ttttgagaaa tctgatgaac ctagggttaa
      661 aagtacacct accaatcgac gatcagagat gattgcactg aattttcgtg agaagatgat
      721 tcaggaaaac gaggaacaat tggcagattt atcgcagcgg tatatccgat tggctaatga
      781 ccttgagaat tttgagatgg ctttaaaatt tctaaaggga gatttatatg attttgctca
      841 atctatgctt aagacagata gtaattggga tagcttgatg agagagtttc atattagccg
      901 aagtactgtt agaaattggc gacgtaaggt cttagaccat gttagggaag tttatctgaa
      961 aatgggattt tctttggaaa agtaacctcc ccctgacctc cccttgacct acccttgacc
     1021 taactgtaac ctccccctgc actatatgtg acctaacatt gacctcactt tgtcaaaatt
     1081 tgtggtagaa ttgtaagtgt caaaaaagat aaaaaatacc cagtaatgac tggatatatc
     1141 tcctttttag agttaatatg tacacaacaa aagaagagga gaacaatacc atgacaaaac
     1201 gccaagaaga aaaactcaat gcccttttaa cagatattgc taaagaagaa ctactagttg
     1261 aaaccttgga aaaacgctgg agcgacaacc ttgatttcta cgatgtttcg gtttggggaa
     1321 tcaaaagagc attagagaga gtctacgaag caggccgtca atcagtaaaa taaaccaaag
     1381 cctagcccaa gggttgggct ttttgcgtgg aggaattatg attatttcaa gtgaacaagt
     1441 gtcagttgga cacccagata aaatttgtga tcagatttca gatgccattt tgacggagtg
     1501 tctcaaatat gacaaatcaa gtcgagtggc agttgagact ttaatcaagg ataaccatgt
     1561 tgtagtagct ggtgaaattt caactagaca ttactttaat ctcgagaaca ttgtacgtca
     1621 ggttatcgag ccacttggta tgaagaatgt tcgggtaact aacctacttg gacttcaaag
     1681 ctccgatatt gccaaaggag tagataatgg tggagctggt gaccaaggaa tgatgtttgg
     1741 ttatgcgaca gatgaaacac ctgagtacct gccacttcct tatgtcttag caactcgagt
     1801 ccttgagaaa ctgatatcac ttggtcaccc cttacttgga aaggacgcta aagcacaggt
     1861 atcctacgat tatgagaaga aacggattga cacattttta gtttccatcc aacataccga
     1921 aacggctgac cttgccaaag tgaaacgaat tgtgactgaa gctatgatgt cggtggctca
     1981 tcgttatcgt cagaatctag atttcaacgt tctagtcaat ccaactggtc gttttgttct
     2041 tggtggctca tttgcggatg caggagtaac tggacgtaaa attgtggcgg atacatatgg
     2101 tggtttcgca catcatggtg gaggtgcttt ctctggaaaa gacccaagta aggttgaccg
     2161 ctcagcagca tacatggcac gaaagattgc caaggatatt gttcgtgaag ggtatgcgaa
     2221 acgatgtgaa gtacaactag cctacgccat tggagttgca gaacctgtgt cagtgtatgt
     2281 agaaaccttt ggaaccagtc gctacaccac acaacaactg gaaggaatga ttcgtgaacg
     2341 gtatgattta acaccacgag gtatcattaa ggaacttcat ctcttgaatg tagactacac
     2401 caaaacatct tgcttcgggc atttcacgaa agactatcta ccttgggaga agtaaaatgc
     2461 caagaagacc aagtacacct tgtaaacata atggttgtcc taacctagta ccttatggac
     2521 agaagtattg tgacaaccat aaagcaaacc accaattgga tgccaagtca accacagcca
     2581 aaggatacaa tgcccagtgg aacaaagcac gactgcgtta cttaaaagtt catccactct
     2641 gtgttcaatg caacgccaaa ggtcgactga ccaaggcaac tgttgttgac catatcacac
     2701 cccaccgagg tgaccaaaaa ctcttttggg atcaatctaa ctggcaagca ctttgcaagt
     2761 cttgtcatga tagaaagacc aagacgactg accgttatgt ggagtattcg tatcgatttt
     2821 agtcttggag tttcgttaca aaagtatctc atttttcacc cgttggggga ggggggatga
     2881 aatctctaaa cccttgggag actaagaccg acgccccctc aaacgtgcaa tttcgcaaaa
     2941 ttcgcaagcg ggtacattaa aatcgcttca ttttgacgtt ccttcccacc gttatcacgt
     3001 ttctaatgtg gggatgtagc gttcccaagt atgtcatttt ggtaataaaa tagtgaaaaa
     3061 ggctagaaac aatgtagaaa atagttgttt ttagtccttt tttgctggaa aggaaaacaa
     3121 atggacgaaa gtcaacgcaa acaaatctgg aaaatgcgag cagaaggtct tggctatggc
     3181 ttaatcggta aggctacagg actgtctaga gattctgtta aaaaatactg taaacgaaat
     3241 ccagcattgc ttggtcatgg agcggcgaca aagcaaatgg caaaagccga ccagaatgac
     3301 ggactccgtt gcccacagtg ttatcaaaca cttaaaattc ataaaatagg aagaccaaag
     3361 aagttctgtt cggataaatg tcgtaaagtc tggtgggcca ctcattctga cgaacacgac
     3421 aaatcaaaaa c
//
LOCUS       DASFQS010000153         3428 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.157, whole genome shotgun sequence.
ACCESSION   DASFQS010000153 DASFQS010000000
VERSION     DASFQS010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.157"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            84..1592
                     /locus_tag="U1041_002152"
     CDS             84..1592
                     /locus_tag="U1041_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEM4769227.1"
                     /translation="MSHHHVLQNGSDIRGFAIATDEYAVNLTPQAIKEVVRGLIHWLT
                     QKPELAQAYQVGQLKIGIGRDSRLSGPDLVAAFTEEAVRLGIQLIDFGMATTPALFMS
                     TQYPQFKCHAGVMVTASHLPYYFNGIKIFSENGGAEHEDIDFILSHSEDLPASSLGSI
                     TSADLITPYAQDLVGKIRTACGGQEKPLTGLNIIVDAGNGAGGFFAEKVLAELGADTT
                     GSQFLDSDGTFPNHVPNPDNKEAMESIRQAVLKQGADLGIIFDTDVDRAALVTKSGQI
                     LNRNNLIAVLSQIVLAEHPGISIVTNSPTTEHLKVFIESLGGKQIRYISGYRNVINRA
                     ILANQEGVDCQLAIETSGHAAFKENYFLDDGTYVAAKILMLLPKLQAEGKSLDDLIGQ
                     LKQPLETQEVRFKLEATDYRALGEQVIAELRNTSLEGFTFNPENEEGVRFDLTDPYGD
                     GWFLLRMSLHEPLLVLQVENDQTGYIPAVLKTLSAFLDQYPAVNQEKLKELI"
     gene            complement(1662..2732)
                     /gene="xerS"
                     /locus_tag="U1041_002153"
     CDS             complement(1662..2732)
                     /gene="xerS"
                     /locus_tag="U1041_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012658412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerS"
                     /protein_id="HEM4769228.1"
                     /translation="MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKE
                     YRRFFEWLQDSDLVSVERIADIPLDVLEHLTKKDMEAFILYLRERPLLNANTTQNGVS
                     QTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
                     LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLD
                     LRDVNLNMMMIEVTRKGGKRDSVNVAGFAKPYLEAYMSIRQQRYKAEKSDTAFFLSEY
                     RGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDATKSQVLVSHQLGHAN
                     TQVTDLYTHIVNDEQKNALDQL"
     gene            complement(2890..3410)
                     /locus_tag="U1041_002154"
                     /pseudo
     CDS             complement(2890..3410)
                     /locus_tag="U1041_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935005.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
BASE COUNT          965 a          755 c          722 g          986 t
ORIGIN      
        1 acagtagaag ctgtactttt ttcttttgaa agcgttttga ttttgtgata tactgaacct
       61 actagataaa tcaggaggtt actatgtcac accatcatgt tttgcaaaac ggatcggata
      121 ttcgtggatt tgctatcgct acagatgaat atgctgtcaa tctcactcca caggccatca
      181 aggaagtggt tcgcggacta attcattggc tgacccagaa gcctgaactt gctcaagcct
      241 atcaagtagg acaactcaag attggtatcg gccgagatag ccgcctcagt ggtccagact
      301 tggtcgccgc cttcacagaa gaagcagtgc gtttgggcat tcagttgatt gacttcggca
      361 tggctaccac gcccgccctc ttcatgagca cccagtaccc gcagttcaag tgccacgcag
      421 gagtcatggt tactgccagc cacctgcctt attactttaa cggcattaag attttttcgg
      481 aaaatggcgg agcagaacat gaagatattg acttcatcct ctcgcatagt gaagacttgc
      541 cagcttcttc ccttggaagt atcaccagtg cagacctgat tacgccttat gcccaagact
      601 tggtgggtaa aattcgtacc gcctgtggtg gacaagaaaa accactgaca ggtcttaata
      661 tcatcgtcga tgctggaaac ggtgcaggcg gattttttgc tgagaaagtt ttggcagaat
      721 tgggagcaga taccactggt tcgcaattcc tagactcaga cggcaccttc ccaaaccatg
      781 ttccaaaccc agataacaag gaagctatgg aaagcattcg tcaggctgtc ttgaagcaag
      841 gtgcagacct aggcattatc tttgataccg acgttgaccg tgccgccctg gtcaccaagt
      901 caggtcaaat tctcaatcga aacaacctga ttgccgttct cagccagatt gtcctagctg
      961 aacatccagg aatcagtatt gtgaccaatt ccccaacgac tgaacaccta aaggtcttta
     1021 tagaaagcct gggaggcaaa caaattcgct atatttcagg ctaccgtaat gtcatcaacc
     1081 gtgctatttt agcaaaccaa gagggagttg attgccagtt agctatcgaa acctctggac
     1141 acgctgcctt taaggaaaat tactttcttg atgacggaac gtatgtggcg gctaagattc
     1201 ttatgctctt acccaaactg caagcggaag gcaaatcctt ggacgacttg attggccagc
     1261 ttaaacaacc gctggaaacc caagaagtgc ggttcaagct ggaagctaca gactatcgag
     1321 cacttggtga acaggtcatt gctgaactca gaaataccag cctcgaaggc tttactttta
     1381 acccagaaaa cgaagaagga gtgcggtttg acctgaccga tccttatggg gacggctggt
     1441 tcttgctccg tatgagcctc cacgagccac ttttagtctt gcaggtggag aatgaccaga
     1501 ctggctatat tcctgccgtt ttgaaaacct tgtcagcctt tttggaccag tacccagctg
     1561 tcaatcagga aaaattgaaa gaattgattt agatttaaga gaaaaagggg taagttttcg
     1621 cttactcctt aatttattta cataattaat attacgtaaa atcataactg atccagagca
     1681 tttttctgct catcgttgac gatatgggta tagaggtcag tgacttgggt gttggcatga
     1741 ccaagctgat gactgaccag aacttgcgac ttggtggcgt cgtagagccg agttgccagc
     1801 gtatgacgga gtttgtgggg ggttacgcgt atcttgaagt ccgcagaata cttggccacc
     1861 attttctcaa tggaagaagc gtcgatgcga ttaggcagac cacggtactc agacaggaaa
     1921 aaggccgtgt ccgatttttc agccttgtag cgttgctgac ggatgctcat ataggcttcc
     1981 agatagggct tagcaaaccc agccacattg accgagtccc gtttgccccc tttacgcgtc
     2041 acctcaatca tcatcatatt gaggtttaca tctcgaagat ccaaattcac cgcttctgac
     2101 agacggacgc cagaagccaa gagaagcgcc agaatcgcca aatcccgctc cttatttttt
     2161 tggaaggagg agagcgcacg ttttgagaga ttgacttggt attccttgtc cacatagtcc
     2221 aagaactcca tcgtttcatc gcccaaaaag agcttttgtt tgatgttctc tgcccgcgct
     2281 gccaaggttt ccttcttctt cttagtagat accttcttca tgacattgcg gtagaagtag
     2341 ggctcgccct gctcattttc cacttcttcg gttaaatact tgaagagact agaaagagcc
     2401 gagagggtac ggttaatggt ggtttgcgac acaccattct gcgtggtatt ggcgttcagc
     2461 aggggacgct cccgcagata aagaataaag gcctccatat ctttttttgt caaatgttcc
     2521 agaacatcca gcggaatgtc agcaatccgt tccacagata ccaaatcaga atcctgtaac
     2581 cattcaaaaa aacgacggta ttctttcaag tattcataca aggttgtaaa actgtaaggc
     2641 acagctaact ttgattgata atattccaga acaaaccaag gcataatttc ttttagttga
     2701 tcaatttttt ccaataataa ctcacgtcgc atcattttct cctgattttt agttatatga
     2761 gtagtatagc ataaccttat gcaagtttca agaaaattat agtttttcgg aaagatatcg
     2821 gaggtatttc aaaaagatag ccaaatatag agggataact ggaaattttt ttcacactca
     2881 aaatctagat tatttctcgg caaactcact gagcattaga atttccttcg caacctcttc
     2941 tggcttcaaa ctgtctgtgt ttaacctttg ccctggaatc tgactttcaa aagcttttaa
     3001 accaacatca agatatcttt ttgtccagat gttgtcttca ttgactcgat tatctaaacg
     3061 tttcaaaatg gttgttttgt cagctaacaa aatataatgt tccaaaggaa tcttatcctg
     3121 tatcaattgc tgaataatct cctgataata ttctttttta tagattatca tgggaataat
     3181 aataatctta tcagttttag tcgctaaatc aaatactatt ttataagtac tctgtcgcca
     3241 aacggaataa tcttgaaaat tttcaggact acagtcttag gtaattgatg ttgtaagaaa
     3301 tcacctagta actcgggatc atagagatat gagttttcta ttcgtttgtg taatatattt
     3361 gctaaagtag tctttccgac accgaatggg ccatttaaac aaataatcat atagtattcc
     3421 tttctatt
//
LOCUS       DASFQS010000154         3337 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.158, whole genome shotgun sequence.
ACCESSION   DASFQS010000154 DASFQS010000000
VERSION     DASFQS010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3337
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.158"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            88..1125
                     /locus_tag="U1041_002155"
     CDS             88..1125
                     /locus_tag="U1041_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISSag10 family transposase"
                     /protein_id="HEM4769229.1"
                     /translation="MPTIKDALDIIGKLTVAEQESLKTMLLSPAFVKSLNIEDFVAKE
                     RFANGRVCPLCGCIHVVRNGHRKDGTQRYVCKDCGKSFVIATNSIVSGTRKDLSVWEQ
                     YIDCMMNGLSIRKTAVACGIHRNTAFLWRHKILDALQNMADDVTLDGIIEADETFFAI
                     SYKGNHSKSKTFAMPRKAHKRGHSTHIRGLSQEKVCVPCAVNRNGLSISKITNTGRVS
                     TRDLHHIYDGRIKTNSTLVTDKMNSYVRFTNANGIDLVQLKTGKAKKGIYNIQHINSY
                     HSQLKRFMRGFNGVSTKYLNNYLVWNNLVNYAKESDMEKRNIFLTFVLATLKTAKCRD
                     LSNRPAVPLVA"
     gene            1149..1574
                     /locus_tag="U1041_002156"
     CDS             1149..1574
                     /locus_tag="U1041_002156"
                     /inference="COORDINATES: protein motif:HMM:NF025054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4769230.1"
                     /translation="MVRIATVNDAEQLNILNNEFNGEGASIDNIGNSLVSNKQEVVIV
                     ADEDDILVGFVCVQLKKSFCYDEYMPEITEVYVKPTYRNRGIASEMIIFAENYCSKNY
                     PLHQYELLTGQENLVAQSVYNKLGYVDDNELHLSKRVKR"
     gene            1678..2454
                     /locus_tag="U1041_002157"
     CDS             1678..2454
                     /locus_tag="U1041_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002578722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(9) family aminoglycoside
                     nucleotidyltransferase"
                     /protein_id="HEM4769231.1"
                     /translation="MNINEFPQQVNQVISIAETILQGQILGIYLYGSATMNGLRPDSD
                     IDILIITKQELSNSIRADLTKQLLKISGSVGCIEKRPLEVTIINQSDIVPLQFPPKCQ
                     YMYGEWLRGEMEAGEYPQACNDPDIMILLWQARKNSITLKGAESKELIPAIPFHEIKK
                     AIRFSLPGLISSFKGDERNVLLTLSRMWFTLVTEEITTKDVAAKWVILKLPERFPPLL
                     TTAKEAYLGNLSDEWETVEKEAMALVEYMKKQIEELLRTE"
     gene            2654..3199
                     /locus_tag="U1041_002158"
     CDS             2654..3199
                     /locus_tag="U1041_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014932870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4769232.1"
                     /translation="MNQGRIIVITGSPGTGKTTTASIVAKESNMDKSVHMHTDDFFHY
                     LSKGAIPPHLPESNEQNLVVIEAFLEAAKRYARGGYDVIVDGIVGPWFLEPWLNIVQE
                     HYKVHYIVLRASKEETMKRAIERSKLDRETNIELVETMWNQFSNLGIYELNVIDTTAH
                     SIKDTVSAVKEKIVSGTALLF"
BASE COUNT         1139 a          534 c          719 g          945 t
ORIGIN      
        1 gctatgtcac aacaaacggt tgatttttga cgagaaatag cgcataataa tagtaggaaa
       61 tagtaccacc gaaggaggta attggatatg cctactatca aagacgcatt agatattatc
      121 ggtaagttga ctgtcgcaga gcaggaaagc cttaaaacaa tgcttttaag tcctgccttt
      181 gtaaagtctt tgaatattga agatttcgta gcaaaggaac gctttgcaaa tggtcgtgta
      241 tgccctcttt gtggctgtat ccatgtggtt cgcaatggtc atcgtaaaga tggcacacag
      301 cgatatgtat gtaaggattg tggcaagtcc ttcgtgattg ctacgaactc cattgtgtct
      361 ggtacaagaa aagacttgtc cgtgtgggag cagtacattg attgtatgat gaatggctta
      421 tccattcgta agactgctgt tgcttgtggg attcacagaa acaccgcatt cctttggaga
      481 cacaagattt tggatgcact tcagaatatg gcagacgatg ttacccttga cggcattatt
      541 gaggctgacg aaactttttt cgccatctcg tacaagggca atcatagcaa gagtaagaca
      601 tttgctatgc cacgcaaggc tcataagcgt ggtcattcta cacatatcag aggcttgtcc
      661 caagaaaagg tatgtgttcc ttgtgcggtt aataggaatg gcttgtctat ctccaagatt
      721 acgaatactg gtagagtttc tacaagagat ttacatcata tttatgatgg taggattaag
      781 accaattcca ctcttgttac ggacaagatg aactcctatg tgagatttac aaatgccaat
      841 ggtattgacc ttgtgcagtt aaagactggc aaagccaaga aaggcattta taatatccaa
      901 catatcaata gctaccatag ccagctaaag aggtttatgc gtggctttaa cggtgtttct
      961 accaagtatc tgaacaacta tcttgtgtgg aataaccttg taaattacgc caaagaaagc
     1021 gacatggaga aaaggaacat cttcttaact tttgttttgg caacattgaa aactgctaaa
     1081 tgcagagatt tatcaaacag accagcagtt cctctggtcg cctaattaga atttgatgag
     1141 gtgtaattat ggtaagaatt gcaacagtaa atgatgcaga gcaattaaat atcttaaata
     1201 acgaatttaa tggtgaaggt gcaagcatag ataatattgg aaattctctt gtgagtaata
     1261 aacaggaggt tgttatcgtt gctgatgaag atgatatatt agtaggattt gtatgtgttc
     1321 aacttaaaaa gtccttctgc tatgatgaat atatgcctga aattacggaa gtgtatgtta
     1381 aaccgacata tagaaataga gggattgcga gtgaaatgat tatttttgca gaaaattatt
     1441 gcagtaagaa ttatccactt catcagtacg aactcttaac aggacaagaa aatcttgttg
     1501 cacaatctgt atataataaa cttggttatg tagatgataa tgaacttcat ttatcaaaac
     1561 gagttaagag atagtcaaat ttcagtttgt aggggagttc tgatactccc ctataaaaat
     1621 ggctatttat caactgtttg ttgtgacata gccaaataaa tacatatagg agttacaatg
     1681 aatataaatg aatttccaca acaagtaaat caagttattt caatagcaga aaccatatta
     1741 caaggtcaaa tattggggat atatttatat ggttcagcaa caatgaatgg gctgcgtcca
     1801 gatagtgata tagatatact gataattact aagcaagaat tgagtaattc aatcagagca
     1861 gatctaacaa agcaattatt gaaaatttct ggctccgtag gctgtattga aaaaagacct
     1921 ttagaggtaa ctattatcaa tcaatctgat attgttccgt tgcaatttcc gccaaaatgt
     1981 cagtatatgt atggtgaatg gctaagggga gagatggaag caggagaata tccgcaagcc
     2041 tgcaatgacc cagatataat gattttatta tggcaagcaa gaaaaaatag cataactttg
     2101 aagggggcgg aaagcaaaga gcttattccc gctatcccat ttcacgaaat taaaaaagca
     2161 attcggtttt ctttacctgg tttgatttcc agctttaagg gtgatgaaag aaatgtgtta
     2221 ttaaccttat cacgaatgtg gtttacttta gtaacagaag aaatcacgac aaaagatgtt
     2281 gccgcaaaat gggtaatttt aaaattgccg gagagatttc cccccctgct aacaacggca
     2341 aaggaagctt atttgggaaa tttgtctgat gaatgggaga cagtagaaaa ggaagcgatg
     2401 gcacttgtag aatatatgaa aaaacaaatt gaggaattac ttagaacaga gtagcaaagt
     2461 tagcggggcc aatcaacggt caagatgaac ggcgcataaa tgcgccgccg ttgacagtcc
     2521 cgcccgtctt tgctgatggg caatcaaggc gggaaagccc taaaatggct tcccgcccat
     2581 ttcaatcttg agagaagaaa cgctccaaaa tcagaaagag agcggtaaat ctgaattgcg
     2641 agggagaatg tagatgaatc aaggaagaat tattgtgatt acaggttcgc cgggaacagg
     2701 aaagacaaca actgcgtcga ttgtcgcaaa agaatcgaac atggataaat ctgtgcatat
     2761 gcacacagac gacttttttc attatttaag caaaggagca ataccgccgc atttaccaga
     2821 gtccaacgaa caaaatttag ttgtcattga agccttttta gaagctgcaa agcgctatgc
     2881 ccgcggcgga tatgatgtaa ttgtagatgg aattgtagga ccgtggtttt tagagccgtg
     2941 gctcaacatt gttcaagagc attataaagt acactatatc gttttaaggg caagtaaaga
     3001 agaaaccatg aagcgagcta tcgaacgctc aaagttagat agagaaacaa atattgaatt
     3061 agttgaaaca atgtggaatc aattttccaa tttaggaatc tatgaattaa atgttataga
     3121 tacaactgcg cattcaatca aagatactgt ttcagcagta aaagaaaaaa tagtaagcgg
     3181 tacggcctta ctattttaga caattattgg tggtaagttt gttaaaatta gaacattcaa
     3241 attgcctaat caagaattgc cagaaaatgt ttattattat gactctattt agttattaag
     3301 aatgaggtgc aaagatggat attataagta gaaaata
//
LOCUS       DASFQS010000155         3173 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.159, whole genome shotgun sequence.
ACCESSION   DASFQS010000155 DASFQS010000000
VERSION     DASFQS010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.159"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            70..897
                     /gene="mutM"
                     /locus_tag="U1041_002159"
     CDS             70..897
                     /gene="mutM"
                     /locus_tag="U1041_002159"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEM4769233.1"
                     /translation="MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQD
                     LIGQEILDVDRRGKYLLIYLTDHVLISHLRMEGKYNFFADQVPANKHFHAFFTFSDGS
                     TLVYQDVRKFGTMELLGKADVGAYFISRKIGPEPTEEDFVLEEFALKLAKSKKPIKSH
                     LLDQSLVAGLGNIYVDEVLFKAQVHPAQASNQLSAEQVADLRQATIAVLQLGIEKGGS
                     TIRTYKNALGMDGTMQDYLQVYGKTGQACPRCQTEIVKIQQGGRGTHFCPKCQVKDG"
     gene            890..1492
                     /locus_tag="U1041_002160"
     CDS             890..1492
                     /locus_tag="U1041_002160"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEM4769234.1"
                     /translation="MAKVIGITGGIASGKSTVTAFLREQGYPVIDADAVVHELQAKGG
                     KLYQVLLAEFGEAILSDDGSLDRAKLGQAVFADSKLRARLSVLQDQIIRQELLARRDA
                     LKQTEQVVFMDIPLLYEADYSGEVDEVWLVYVDRAQQLERLMKRNSLSVQDAENRLAA
                     QLSLEEKRGKAQVVIDNSGAVETTLAQVAQLLEELKDGRR"
     gene            1479..2684
                     /locus_tag="U1041_002161"
     CDS             1479..2684
                     /locus_tag="U1041_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HEM4769235.1"
                     /translation="MDDGSSYWKQNLKVAWLGNFLTGTSFTLVMPFISVFVEEFGVGP
                     GQVEYYAGLAVSANAFAAAVMAPIWGSLADRYGRKPMMVRAAFAMIFTMGGMAFVPNV
                     FWLLALRVLNGVFTGYIPNATALVASQVPKDKTGYALGTLSTGAVAGNLIGPTLGGIL
                     AEMFGVHMVFLLVGLLYAIVVLLTVFYIREDFVPIKKGEEMSVKEVFEQVKDRQMLVG
                     LFVTSMIIIAAAQAVVPILTLYVRHLGQTDNLLFVAGFIISLPGMASLVTSGYLGKLG
                     DKIGNHRLLLMALTYSLLINVLCVFAENPFQLGLLRFMYGFGTGALLPSVNSLLTKLT
                     PKEGISRIFSYNQLFNNLGSVVGPMMGSAVAAHMGYDWVFYLSSGLVLFNLIWSLTNF
                     RNYLKVRDV"
     gene            2684..2833
                     /gene="rpmG"
                     /locus_tag="U1041_002162"
     CDS             2684..2833
                     /gene="rpmG"
                     /locus_tag="U1041_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM4769236.1"
                     /translation="MRVKINLQCSECGSKNYLTSKNAKTHPDKIEVLKYCPKERKVTL
                     HLETK"
     gene            2880..3113
                     /gene="secG"
                     /locus_tag="U1041_002163"
     CDS             2880..3113
                     /gene="secG"
                     /locus_tag="U1041_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEM4769237.1"
                     /translation="MYQALLAILLILSVILIVVIFIQPAKNQSSNVFDSSSGALFERT
                     KARGFEAVMQRITAILVFLWMLDALALVIISSK"
BASE COUNT          773 a          591 c          847 g          962 t
ORIGIN      
        1 cttgtgtgca agtcacacag cgtcgctctc ctaattttca gtcgcttttt acgctcttgg
       61 tatcgtacat tgccagaatt gcctgaggtt gagacggttc gtcgtggttt aaatcggttg
      121 gttaagggaa aggttatttc caaggtggag gtaacctatg ctcccatgat taagacaggt
      181 gtggatgcct tctgccaaga cttgattggt caggagattt tagatgtgga ccgtcgtggc
      241 aagtatctct tgatttacct gacagaccat gtcctcattt ctcatttgcg gatggaaggt
      301 aagtacaatt tctttgctga ccaggtgcct gccaacaaac atttccatgc cttttttact
      361 ttttcagatg gctcgacctt ggtttatcag gatgtccgca agtttggcac aatggaactg
      421 ctgggcaagg cagatgtggg tgcctatttt atcagtcgaa aaattggtcc tgagccgacg
      481 gaggaagatt ttgtcctaga agaatttgca ctcaagttag ctaagtcgaa aaagcccatt
      541 aagtcgcatc ttttggacca gtctttggtg gctggtttgg gaaatattta tgtcgatgag
      601 gtcttattca aggcacaagt tcatcctgct caagcaagta atcagctatc ggctgagcag
      661 gtggcagacc tccgtcaagc caccatagca gttctacaac tgggaatcga aaaaggtgga
      721 tcaaccattc ggacctataa aaatgccttg ggtatggatg ggactatgca ggattattta
      781 caagtttacg gaaagacagg gcaggcctgt ccccgttgcc agacagagat tgtcaaaatc
      841 cagcagggcg gacgggggac acatttctgt cccaagtgtc aggtgaaaga tggctaaagt
      901 gatcggaata acagggggca tcgcctctgg aaaatcaacg gtcacagctt ttttacgaga
      961 acagggctat ccagtcatcg atgcggatgc ggtcgtgcat gagttgcagg ccaaaggtgg
     1021 caagctctat caggtcttac tggctgagtt tggggaagct atcctgtcag atgatggcag
     1081 tctagatagg gctaagctgg gtcaggctgt ttttgcggat agcaagttgc gggctcgttt
     1141 gtctgtcttg caggaccaga ttatcaggca agaattgttg gctaggaggg atgctctcaa
     1201 acagacggag caagttgttt tcatggatat tcccctgctc tacgaggcgg attatagcgg
     1261 ggaagtagat gaagtctggc tggtctatgt cgatcgagca cagcagttgg aacggctcat
     1321 gaaacgtaat agtttatctg ttcaagatgc agaaaatcgg ctggctgctc agctttcttt
     1381 agaggaaaaa cggggcaaag cccaggtggt gattgacaat agcggagcgg ttgagacgac
     1441 cttagcacag gttgcgcaac ttttggagga attaaaggat ggacgacggt agtagttatt
     1501 ggaagcagaa tttgaaggtg gcttggttgg gaaatttcct aacagggacg agttttacct
     1561 tggttatgcc ttttatctcg gtttttgtgg aagagtttgg ggtaggtcct ggacaggtgg
     1621 aatactatgc agggctggca gtgtcggcca atgcctttgc agcagcagtt atggcgccca
     1681 tctgggggag tttggcggac cgttacggtc gcaagcccat gatggtgcgg gctgcttttg
     1741 cgatgatttt tactatgggt ggtatggcct ttgtaccaaa tgttttttgg ttgcttgcct
     1801 tacgtgtcct aaacggggta tttacagggt acattccaaa tgcgactgcc ttagttgcca
     1861 gtcaggttcc aaaggataag acggggtatg ctctggggac cttatcaaca ggtgcggtag
     1921 cggggaattt gattggtccg accctgggtg gtatcttagc agagatgttt ggcgtacata
     1981 tggtattttt gctggtggga cttctttatg ctatcgttgt gttactgacc gttttctata
     2041 ttcgagagga ttttgttcca atcaaaaaag gcgaagaaat gtcggttaaa gaggtatttg
     2101 agcaggtgaa agatcggcag atgctggttg ggctttttgt gacttctatg attattattg
     2161 cagcggctca ggcggtggtg ccgattttga ctctttatgt acggcatctg ggtcagacgg
     2221 acaacctgct ctttgtagct ggttttatca tttccctgcc tggaatggct tctttggtga
     2281 cttcaggcta tttaggaaag ttgggtgaca aaattggtaa ccacaggctt ctcttgatgg
     2341 ctttgaccta tagcctgctc atcaacgttc tctgtgtttt tgcagaaaat cctttccagc
     2401 ttggtttgtt gcgattcatg tatggttttg ggacaggagc attgttgcct tcggtcaatt
     2461 ctcttttgac caagttgacc ccaaaagaag ggatttcaag gatattttcc tacaaccaac
     2521 tctttaataa tctaggttcg gttgttggtc ccatgatggg gtctgcggta gctgctcaca
     2581 tgggttatga ctgggttttc tatctgtcga gcggacttgt cctctttaac cttatctggt
     2641 ctttgaccaa ttttagaaac tatttgaaag taagggatgt ttagtgagag ttaaaatcaa
     2701 tttacaatgt tcagaatgtg gtagtaagaa ctacttgact agcaaaaacg ccaagactca
     2761 tccagataag attgaagtcc ttaaatactg cccaaaagag agaaaagtaa ccctccacct
     2821 tgaaactaag taggttttat ggtataatgt cataagttat tgtagaaagt gaaaaaaata
     2881 tgtatcaagc attattagca attctgttga ttttatctgt tattttgatt gtagtgattt
     2941 ttattcaacc ggctaaaaac cagtctagca acgtctttga ctcttctagt ggagccttat
     3001 ttgaacgtac aaaggcccgt ggttttgaag cggtgatgca acgcattaca gctattcttg
     3061 tttttctttg gatgctggat gcgctggcac ttgttatcat ttcaagtaag tagataaatc
     3121 agactgggac ttgttcttgg tctatttttt tgggagtggg tcagaactcg aca
//
LOCUS       DASFQS010000156         2929 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.160, whole genome shotgun sequence.
ACCESSION   DASFQS010000156 DASFQS010000000
VERSION     DASFQS010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2929
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.160"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(200..523)
                     /locus_tag="U1041_002164"
     CDS             complement(200..523)
                     /locus_tag="U1041_002164"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769238.1"
                     /translation="MKIIKTIFKTYWNISMFIVRLVAPLFNYIERELFKTLGTMGPSG
                     SVPVDKDLLNGAAAEQEEARRKMLDTKRQAQIAEERARQTRHHQDQMRAAQARADADR
                     ARRQY"
     gene            complement(527..>2929)
                     /locus_tag="U1041_002165"
     CDS             complement(527..>2929)
                     /locus_tag="U1041_002165"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:TIGR04320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HEM4769239.1"
                     /translation="MASTVETPVATETPAAETTAVEAPKTAAEVKSEVDAQQAVVDAT
                     ATEASQAQTEADVIAKEVTDAQTDVTTATDTVADAEANAANATPENIAANQADQTANL
                     ADQAANATETDEVNAEITAQTQAVADAQTAVDTAQAEKDQADATVTAKEADVKSAQDA
                     ISGTGLAEAQATLDQATADVKTAQDNVTTATTAVDTAKKADADRQTKIDTATTDVAVK
                     TDTVDTAKAKLTTAQDTVKTTTDAVNKATDTVKSATDALANVDTVTIADLTQFKADKA
                     EGDSDFMTDSGATVIEQSSTKIGQNDKSKIVDVTNITDEQLTDLSQYYAMLITELRQA
                     MGLNSVVTTSKDAIAIAKEQVAKYITRGTNIIDNGHVSLAEKQAAENVGTIGTISTMY
                     DLKSNAFDTFLATSFADAPSNWGHLTNNLVFGSKVGVAPVQINGQNYLVIAFTNSGTP
                     ITNPNDPATLQAALAKAQAALTAAQTASDEAKAKLTQASSDYATALEAKTQAEKTLAD
                     ATATPLQTQVAENNLRLATIALQNAEARKADAQKAVDNFSADLATKKAALDTAKTELA
                     QAQTTATAKAEVLETAKVELAKQQATLDSLNKDKDALLAEKDRLVEEAKALATELKGY
                     LDAPAILANAQATLTEKQAALTEAQAKAETAKNKLETVTAKLAEEESKLAELQAEYNK
                     LKDLEDKAKDNVIATLPDGTIVAVPKDAPTAVEKPAINIDVVKQALDKGQDVKVVDGK
                     VVVMNPQAGVTVTPQGITYSRAERAKALPQTGEQESILGLVGLAMMSTLGLAGARRKR
                     RG"
BASE COUNT          666 a          588 c          632 g         1043 t
ORIGIN      
        1 ctcctttccg tcagattttg atgaattgcc cataggcatc acctcacttt cagagaattc
       61 agagccaccg tcttcacttt tctactcatc tattataaca catttcattc ccaaaacttg
      121 ttgaaatagc gtagtctttt caataagttt tgggaatcca aaaaaatctt cctactatct
      181 aagtaagaag attttttatt tagtattgcc ttctagctct atcagcatca gctcttgctt
      241 gtgctgctcg catttggtct tgatggtgtc gtgtttgtct tgcacgttcc tctgctatct
      301 gagcttgtcg ctttgtatca agcatctttc gtcgtgcttc ttcctgctcc gcagcagctc
      361 cgttaagtag atctttatca acaggtactg atccgcttgg tcccatcgtt cctaatgttt
      421 taaacaattc tctttcaata tagttaaaaa gcggtgctac taaacggaca atgaacattg
      481 aaatgttcca gtaggttttg aaaattgtct ttataatttt cattgtttaa cccctacgct
      541 ttcttcttgc tcctgccaag ccaagcgttg acatcatggc aagacctacc aagcctagaa
      601 tactttcttg ttctcctgtc tgaggtagtg ctttcgcacg ttctgcacgt gagtaagtaa
      661 taccttgtgg tgtgacggtg acacctgctt gtgggttcat taccacaacc ttaccgtcaa
      721 caaccttcac atcttgacct ttatcaagag cttgtttgac tacatcaata ttgatagctg
      781 gtttttcaac agcagttgga gcatcttttg gtactgcaac gattgttccg tctggaagtg
      841 ttgcaatcac attgtctttt gctttgtctt caaggtcttt gagtttgttg tactcagctt
      901 gaagttcagc caatttgctt tcttcttcag caagtttagc agtaacagtt tcaagtttgt
      961 tttttgctgt ttcagcttta gcttgtgctt cagttagagc cgcttgtttt tctgtgaggg
     1021 ttgcttgagc gttagcaaga atagctggtg cgtcaagata acctttcaac tcagtagcaa
     1081 gtgcttttgc ttcttcaacc aaacggtctt tttctgcaag aagagcgtct ttatctttat
     1141 tcaagctatc aagtgttgct tgttgtttag caagttcaac cttagctgtt tcaagaactt
     1201 cagcttttgc agtagcagta gtttgtgctt gagcgagttc agttttagct gtatcaagtg
     1261 cagctttctt agttgccaaa tcagctgaga agttgtcaac tgctttttgt gcatcagctt
     1321 tgcgagcttc agcgttttga agagcaatgg ttgcaagacg taggttattt tctgctacct
     1381 gtgtttgaag cggtgtggca gtagcatcag caagagtttt ctctgcctgt gttttagctt
     1441 caagtgcggt agcgtaatct gagcttgctt gagtcaactt cgcttttgct tcatcagatg
     1501 cagtttgggc tgctgtaaga gctgcttgag ctttagcaag ggcagcttga agagtagctg
     1561 ggtcgttagg gttggtgatt ggggtgcctg aatttgtaaa tgcaatgaca agataatttt
     1621 gaccattgat ttgtacaggt gcaacaccaa cttttgaacc gaaaacaagg ttgtttgtta
     1681 gatgacccca gttagatgga gcatcagcaa atgatgttgc taagaatgta tcaaatgcat
     1741 ttgatttcaa gtcatacatt gtggaaattg ttccgatagt accaacattt tctgcggctt
     1801 gtttttcagc aagtgaaacg tgaccgttat caatgatgtt tgtaccacga gtaatgtatt
     1861 tagcgacttg ttctttggca atagcaatag catctttact tgttgtgaca actgagttta
     1921 agcccattgc ttgacgcaat tcagtgatta gcattgcata atattgagat aggtctgtta
     1981 actgttcgtc tgtaatgtta gttacatcaa caatttttga cttatcattt tgaccaatct
     2041 tagttgaaga ttgctcaata acagtagcac ctgaatcagt cataaagtct gagtcacctt
     2101 cagctttatc agctttgaat tgagtcaagt ctgcgattgt aacagtatcc acatttgcaa
     2161 gagcgtctgt tgctgatttg acagtgtcag tagccttgtt tactgcgtca gttgttgttt
     2221 taacagtatc ttgcgcagta gtcaattttg cttttgctgt atcaacagtg tctgttttga
     2281 ctgcaacgtc agttgttgct gtatcaatct tagtttgacg gtctgcatct gcctttttag
     2341 cggtatcaac ggctgtagta gcagttgtaa cattatcttg tgctgttttg acgtcagctg
     2401 tagcttggtc aagagttgct tgagcttcag caagaccagt accagaaata gcgtcttgtg
     2461 ctgatttgac gtctgcttct ttagcagtga cagtagcgtc agcttggtct ttttctgctt
     2521 gggcagtatc aacagctgtt tgagcatctg caacagcttg tgtctgtgct gtgatttcag
     2581 cattgacttc atctgtttca gtagcgtttg cagcttggtc agcaaggtta gctgtttgat
     2641 cagcttggtt tgctgcaatg ttttctggtg ttgcattggc agcgttagct tctgcgtcag
     2701 ctacagtgtc agtagcagta gtcacatcag tttgagcatc cgtcacttct ttagcaatca
     2761 catccgcttc agtttgagct tgacttgctt cagtagcagt agcgtcaaca acagcttgtt
     2821 gtgcatcaac ttctgattta acttcagcag cagttttagg tgcttcaaca gcagtagttt
     2881 ccgctgctgg tgtttcagtt gcaactggtg tttcaacagt tgatgccat
//
LOCUS       DASFQS010000157         2911 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.161, whole genome shotgun sequence.
ACCESSION   DASFQS010000157 DASFQS010000000
VERSION     DASFQS010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2911
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.161"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(80..>2911)
                     /locus_tag="U1041_002166"
     CDS             complement(80..>2911)
                     /locus_tag="U1041_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004186360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEM4769240.1"
                     /translation="RAFQRELETTKNVLNSYESKLENVSRTISENSSQVDSNKAKLQA
                     LQSEQAQLVSESEKLTSSIKLQESALRSNASESDKLALAHQKVTGHSEILERQIQNLE
                     KQLELTKSEFGDQSIEANKLEKTLNETKVAYNQLQNEMEEMASSSDVAKSSLSETNQL
                     LKADLLMEFGDQISELSQKLVDFGKQSLDAFLEIDEGMDVIVTKTGATGAALDEMTDM
                     AKQLATEIPTDFNTAGTAVGLLNTQFDLTGDALKSASTQLIQFSEINGSDVSSSAISA
                     KQAIEAYGLQASDLARILDTVTYTSQETGVGVQELMDKAVAGAPQIKSLGLTFDDGVT
                     LMGRFEKAGVDSSAALSSLSKAAVAYAKDGLTLKDGLAGTVAQIKQSTSETEALSLAS
                     EVFGSKAAPRMVDAIKRGALTFEDLAGTAEKAAGIVTQTYEGTLDPIDQFTTAQNSAK
                     LAMAEIGDAISSTLAPVLQVLAELLQQVATWFSGLSEPIKQFLVVVGLLVAGFGLLLP
                     VFLALQAASMAMGTTIVGLLTAAAPIVGMVLGIIAVIALLVVGIQQLWQHNEGFRTAV
                     MEIWTAISRFISTVIQEVSSFIMSIWGTLTTWWSENQQLILDAANTVWNAISTVITTV
                     MTILGPLIQASWENIKLIITTVWDMIKIVVETAINMVLGIIKAVMQVITGDWAGAWET
                     IKQVLSTVWEGITSLISIALNFIAQFISTAWTGIKNTISNVLSAISSVISTIWSAIQS
                     TISSVLSAIGSTVSTIWNGISSTVSNILNGISNTVSSVWNGVKNTISNAINGARDAVS
                     NAINAIKNLFNFQIRWPHIPLPHFRVSGSANPLDWLKGGIPRISIDWYAKGGILTKPT
                     AFGVNGNSLMVGGEAGKEAVLPLNEQTLGAIGRGIAKTMTSNLPTIHITITGNTVREE
                     TDLHRLAEMVGEKLVYELERQKGLRGVKP"
BASE COUNT          795 a          653 c          565 g          898 t
ORIGIN      
        1 aaaggactat cttccacgat taccttaaaa ggaaaactag acgtggatac tcccccaatg
       61 gttaatgcat tatgtctaat catggtttca ctcctctcaa tcctttctga cgttctaatt
      121 catacactaa tttctctcca accatctccg caagtcggtg aaggtcagtc tcttctctta
      181 ctgtatttcc agtaatggtg atatgaatgg ttggtagatt gcttgtcatg gtctttgcga
      241 ttcctcgacc aattgcaccc aatgtttgtt cattcaaagg caagactgct tcttttccag
      301 cctcaccccc taccattagg ctattgccat ttacaccaaa tgcggttggt ttggttaaaa
      361 ttcctccttt ggcataccaa tcaatggaga ttcttgggat tccacccttt aaccaatcca
      421 gtggattggc tgaacctgat actcgaaaat gaggaagggg aatatgtggc catctgattt
      481 ggaagttaaa gagattttta atagcattga tggcattact cacggcatct cttgcaccat
      541 tgatagcatt agaaatggta tttttcacac cattccaaac agatgaaact gtattagata
      601 taccattcaa gatgttggat acagtactac tgataccgtt ccagatagtt gaaacagttg
      661 aaccaatcgc agataggaca ctggatattg ttgattgaat agctgaccat atagttgaaa
      721 taacagaact aatggcagat agtacatttg agatggtatt cttgatcccc gtccaagcag
      781 ttgaaataaa ttgggcaatg aagtttaacg caatggatat aagagatgta attccctccc
      841 ataccgttga aagtacctgc ttaatcgttt cccaagcacc cgcccaatca ccagttatga
      901 cttgcatcac agctttaatg attccaagaa ccatattgat agctgtttca accacaatct
      961 ttatcatgtc ccatacggtt gtgataatga gtttgatatt ttcccaacta gcttgaatca
     1021 atggtccaag aattgtcatt actgttgtga tgaccgttga aatggcattc catactgtgt
     1081 ttgctgcatc aagaatcagt tgttggtttt cgctccacca agtagtgagt gtcccccata
     1141 tggacatgat aaaacttgaa acttcttgaa tgacggtcga tatgaatctg gaaatagccg
     1201 tccatatttc catgacagcc gtccgaaatc cttcgttatg ttgccagagc tgttgaatcc
     1261 caacaactaa gagggctata acggcaatta ttcctaaaac cataccaact atgggagctg
     1321 ctgccgttag taaaccgaca atggttgttc ccatagccat agaggcagct tggagggcaa
     1381 gaaaaactgg gagtaataac ccaaagccag caactaaaag tccgacaact accaagaact
     1441 gtttaattgg ttctgaaaga ccagaaaacc atgtcgcaac ctgctgcaat aattccgcca
     1501 agacttgtaa tactggtgcg agggttgatg aaatggcatc acctatttct gccattgcca
     1561 acttggcact attttgtgct gttgtgaact ggtcaattgg atcaagtgta ccctcgtagg
     1621 tttgagtgac gatacctgca gctttttccg ctgttcctgc taggtcttca aatgttaaag
     1681 ctcctcgttt aatggcatca accattcgtg gagccgcttt actaccaaat acctctgatg
     1741 ccagagacag tgcttctgtt tcactggtgg attgtttgat ttgtgcaacc gttccagcca
     1801 aaccatcttt gagagtcaag ccatctttgg cataagctac tgctgctttg gataatgatg
     1861 agagagccgc agatgaatcc acacctgctt tctcaaaccg ccccataagg gtcacaccat
     1921 catcaaatgt caaaccgagt gattttatct gaggtgctcc agcaactgcc ttatccatca
     1981 attcctgaac accgactcca gtttcttgac ttgtgtatgt aacagtatca agaatccttg
     2041 ccaaatcact agcctgcaag ccatacgctt caatggcttg ttttgcggaa atggcagagc
     2101 ttgaaacatc actaccattg atctccgaga actgaatcaa ttgagtagat gctgatttta
     2161 gggcatcgcc tgtcaaatca aattgcgtat tcaataaacc aactgcagtc cctgcggtat
     2221 tgaaatcggt cggtatctct gtcgcaagct gcttagccat atcagtcatc tcatcaaggg
     2281 cagctccagt tgcccctgtc tttgtgacaa ttacgtccat tccttcatct atttcaagaa
     2341 aggcatccaa ggattgtttc ccaaaatcaa ctagtttctg agataattca ctaatttggt
     2401 ccccaaactc catcaggagg tcagctttaa ggagctgatt ggtttcagag agactagact
     2461 ttgcaacatc tgaactagat gccatttcct ccatctcatt ttgaagttgg ttgtaggcta
     2521 ccttggtttc attgagtgtt ttctccagtt tattggcttc tattgattga tcaccaaact
     2581 cactcttagt taactccagt tgtttctcta aattttgaat ctgacgctcc agtatttctg
     2641 aatgacctgt cactttttga tgagccagtg ccaacttgtc ggactcactt gcatttgagc
     2701 gaagagcgga ttcttgaagt tttatagaac ttgttaactt ttcactctca gatactaatt
     2761 gagcttgttc tgactgaaga gcttgtagtt tagccttatt gctatcaacc tgactgctat
     2821 tttcagaaat ggttcgtgag acgttttcta gtttactttc ataactattc agaacatttt
     2881 tggtggtttc aagctcccgt tgaaaggctc t
//
LOCUS       DASFQS010000158         2750 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.162, whole genome shotgun sequence.
ACCESSION   DASFQS010000158 DASFQS010000000
VERSION     DASFQS010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.162"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(73..354)
                     /locus_tag="U1041_002167"
     CDS             complement(73..354)
                     /locus_tag="U1041_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HEM4769241.1"
                     /translation="MREKVVERKLVSEVKKRGGVCPKWVSPSFSGVPDRLVFLPNGKF
                     GLVEVKAPDEKPRKLQVSRHKQFERLGFKVYVLDRIEMIGEVLDEIDFT"
     gene            complement(628..>2750)
                     /locus_tag="U1041_002168"
     CDS             complement(628..>2750)
                     /locus_tag="U1041_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM4769242.1"
                     /translation="NFVKSDVLVMDIDNDHSENPDEWITVERLKEIFADYNFALVTSR
                     SHMQAKAGKAPRPKFHIYFQINEVTDKDIYVAMKEELCNQYKFFDDNAKDAARFFFGN
                     PQAEVVWHDSWLTIDEDLFQTVSIDDEEDFDADFYTPTSGPIQQGSRNSTMSVFAAKI
                     LKRLGVTQEARDGFDEQAQKCVPPLDKAELDSIWGSAVRFYNRTIKRSKGYVAPDAFN
                     RDSLKPDDYSDIGEAGVLAREFGDKLAYTNATDYLTFNGKYWKEDKQLAIGTILEFME
                     LQFKEASEQYESAIKQLVQTGIPESIVREGGKGLVKLIDSPNQQILLAKYLSAKAYYQ
                     FVMKRRDYRYIMATHNTAKPMLAIDISELDKNDMLLNTPDATYDLKCGLSGSQAHSAT
                     DYLTKIATASPGNQGMGLWQETLTTFFCGDQELIDYVQMVVGMAAIGRVYQEHMIIAY
                     GGGANGKSTFWNTIARVLGSYSGKLSADTLTMSNKRNVKPEMAELKGKRLIIASEMDE
                     GMRLNTGLVKQLCSTDEIYAEKKYKDPFHFVPSHTLVLYTNHLPKVGANDDGIWRRLI
                     VIPFNAKITGKSDVKNFADHLYDNAAPAIISWIIEGAEKAIKANFKTKLPKVVQESVR
                     AYREANDWLGHFIEENCEIEKGYLQKSGDLYSAYRAYALQNGEYIRSTTDFYTALESA
                     GYHRQRTSKFNAIVGLKLLDDFLD"
BASE COUNT          766 a          634 c          489 g          861 t
ORIGIN      
        1 cccatcccca tgtctaggat gactgctgca taagggtgag ctatgatgaa gtccttggcg
       61 actacctgat agttatgtaa agtcaatttc atctagcacc tctccaatca tctcaatgcg
      121 gtcaagaaca taaaccttaa atcctaaccg ctcaaattgt ttatgccttg atacttgtaa
      181 cttcctcggt ttctcgtcag gagcttttac ttccaccaag ccaaacttgc cattgggtaa
      241 aaataccaac ctgtctggca caccagaaaa agatggtgat acccacttag gacaaactcc
      301 accacgcttt ttcacttcac ttactaattt ccgctctaca actttttctc gcataaccaa
      361 tcctttcatc agaaaaagaa tggaggtcta gtaaactcga atcagtaact ttttatatag
      421 ggcttttata gtaataatta acccattata aaagttatag aaaagagtat cactacttcc
      481 ataactaata atagtgctgg ttgtggaact catatcttaa acctaacact cagccaagta
      541 agccatatta tgttccatga cctccaactt ccattcttca tattcaaaaa tttgtcagac
      601 ttttttcaaa gactagcatg gcttccgtta gtccaaaaag tcatccaata gtttcaaacc
      661 aacaatggca ttaaacttac tagtcctctg acgatggtag cctgccgatt caagtgccgt
      721 gtaaaagtca gtagtacttc tgatatattc tccattctgt agagcgtagg cacgataggc
      781 agaatataaa tcgcctgatt tttggagata acctttctca atctcacagt tttcctcaat
      841 gaaatgtccc aaccaatcat tggcttctcg ataagctctg acggattctt gaacaacctt
      901 tggtaatttc gttttaaagt ttgccttgat ggctttctca gctccttcga tgatccaaga
      961 tataatggct ggtgccgcat tgtcataaag atggtccgca aagttcttca catctgactt
     1021 gcccgtaatc ttggcattga atgggatcac aatcaatcgt cgccaaatac catcatcgtt
     1081 cgctccgact tttggcagat ggttagtgta aagaaccagc gtatgggatg gaacaaaatg
     1141 gaagggatcc ttgtacttct tctcagcgta aatttcatca gtcgaacaaa gttgcttaac
     1201 cagccctgta ttcaaacgca tcccttcatc catttcagat gcaataatga gtcgttttcc
     1261 ttttagttca gccatctcgg gcttaacatt tcgtttgttc gacatggtca aggtatcagc
     1321 ggataatttt ccagaatagc tacctagtac acgagctatg gtattccaaa aggttgattt
     1381 tccatttgca ccacctccat aagcgataat catatgttcc tgatagactc ttccaatggc
     1441 tgccattccg actaccatct gaacatagtc aatcagttct tggtctccgc agaaaaaggt
     1501 cgttaaagtc tcttgccaaa gccccattcc ttgattacct ggacttgcag tggcaatttt
     1561 tgtcagataa tccgtcgcag aatgtgcctg actaccagat aagccacact taaggtcata
     1621 ggttgcatcg ggagtattta gtaacatatc gtttttatcc agttcagaaa tgtcaattgc
     1681 aagcattggc ttggcggtat tgtgggtcgc cataatgtaa cggtagtccc tacgtttcat
     1741 gacgaattga taatatgctt ttgccgaaag atacttggcg agcagtatct gttgatttgg
     1801 tgaatcaatt agtttcacta agcctttccc accctcacga acaatacttt ctggaatacc
     1861 ggtctgaacg agttgtttaa tggcactttc atactgttca cttgcttctt taaattgtaa
     1921 ttccataaat tcaaggatag ttccaattgc taactgcttg tcttccttcc aatacttccc
     1981 attaaatgtg agatagtctg tcgcatttgt ataagccaat ttatccccaa actcacgagc
     2041 cagtactcct gcttctccaa tgtcagaata atcatctggt ttcaaggagt ctcgattaaa
     2101 agcatctgga gccacatagc cttttgatct ttttatggtt ctgttgtaga atcggactgc
     2161 acttccccag atggaatcta actctgcttt atcaagtggt ggtacacatt tctgtgcctg
     2221 ctcatcaaaa ccatccctag cttcttgggt cacgcctaac cgtttgagaa ttttcgcagc
     2281 aaatacagac atcgttgaat tacgactgcc ttgctggatt ggtccacttg taggagtata
     2341 gaagtctgca tcgaaatctt cctcgtcatc aatagaaaca gtttgaaaca aatcttcatc
     2401 tatagttagc catgaatcat gccaaactac ctctgcttgc ggatttccaa agaagaaacg
     2461 tgctgcatct ttggcattgt catcaaaaaa cttgtattga ttacagagtt cttccttcat
     2521 ggctacatag atgtccttat cagttacctc attaatttgg aagtagatat gaaacttggg
     2581 tctaggtgct tttcctgcct tagcctgcat gtgactacgg ctcgtcacta aggcaaagtt
     2641 ataatccgca aagatttctt ttaatcgctc gaccgttatc cactcatctg gattctcaga
     2701 atggtcatta tcaatatcca tgaccaagac atccgacttg acgaaattgg
//
LOCUS       DASFQS010000159         2714 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.163, whole genome shotgun sequence.
ACCESSION   DASFQS010000159 DASFQS010000000
VERSION     DASFQS010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.163"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..414
                     /locus_tag="U1041_002169"
     CDS             <1..414
                     /locus_tag="U1041_002169"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4769243.1"
                     /translation="SASTSASTSASTSASTSASTSASTSASEIWIVSNAGGTSMELPK
                     IDIQSVSESISTSQSLSASISVSTSASTSASTSASMSAMTSETAKPAKRNATKLPNTG
                     ETQSGTAGVLSASMLLGAFALLAKRRRKDQEDDEI"
     gene            639..2537
                     /locus_tag="U1041_002170"
     CDS             639..2537
                     /locus_tag="U1041_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4769244.1"
                     /translation="MIILSGNKIERSFAGEVLFNNINIQVDERDRIALVGKNGAGKST
                     LLKILVGEEAATSGEISTKRDLSLSYLAQDSRFESENTIYDEMLHVFDDLRTTEKRLR
                     SMEEQMGSLSGSELDQLMKTYDSLSEEFRLAGGFSYEADIRAILNGFKFDQTMWDMKI
                     SELSGGQNTRLALAKMLLESPELLVLDEPTNHLDIDTIAWLENYLVHYKGALIIVSHD
                     RYFLDKVATITLDLTKHSLDRYVGNYSQFVELKEQKLQTELQNYEKQQKEIAKLEDFV
                     QKNIVRASTTKRAQARRKQLEKMERLDKPTTGQKSANMTFQSDKTSGNIVLTVENAAV
                     GYDGEILSQPISIDQRKLDVIAIVGPNGIGKTTLLKSIIGALPFIKGEAKLGANVEVG
                     YYDQTQSALTPSNTVLEELWSAFPTTPEVEIRNRLGAFLFSGDDVKKSVSMLSGGEKA
                     RLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIDFDGTLLFVSHDRYFINRVAT
                     KVLEISETGSTLYLGDYDYYLEKKAELEVEAQPDQLESTSQSAGAMDYQAQKENQKEQ
                     RKLARRIEQIEAEIDNIENRLSELNQAMLETNDISQLTDYQKEIDQLTSQQESLMEEW
                     EELSEQMG"
BASE COUNT          811 a          631 c          650 g          622 t
ORIGIN      
        1 agcgcaagta cgtccgcttc gacctctgca agtacatccg cctcgacgtc cgcaagtacg
       61 tctgcctcga caagtgcgtc agagatttgg attgtatcaa atgctggtgg tacttccatg
      121 gaattaccaa aaattgatat tcaatcggta tctgaatcca taagtacctc tcaatcgttg
      181 tcagcaagca taagtgtctc aacaagcgca agtacatcgg cgtccacgtc agcaagtatg
      241 tctgcgatga catctgaaac tgcaaaaccg gcaaaacgga atgcaacgaa gttacctaac
      301 acaggtgaga cacagtctgg aacagcaggt gtgttgagtg catcgatgtt actcggagcc
      361 tttgcgcttc tagctaaacg tcgccggaag gatcaagaag acgatgaaat ctagtacgat
      421 gtgttgttct gtagttggaa ctaggatgat tgaaataagg taggcaaatt ttagtcagga
      481 ccaacttaaa aagaacatac aaaaatagct ctataattcg ctagtggttt caaccattga
      541 cgacattata gagctttttt gggtagaagg attggctatc tatatttttg gtgaatagca
      601 ggtgtcatgg ttcggctaat ttatggtaca atattgctat gattattcta agcggaaaca
      661 agattgaacg ctcatttgcg ggcgaagttt tatttaacaa tatcaacatt caagtggacg
      721 aacgggatcg gattgccctt gtcggaaaaa atggggcagg caagtctact ctgctcaaaa
      781 tccttgtcgg agaagaagca gcgacaagcg gagagatttc aaccaagcgt gatttatccc
      841 tttcttacct ggcacaggat agccgttttg agtcagaaaa taccatttac gatgaaatgc
      901 ttcatgtttt tgacgacctg cggacgacgg aaaaacgcct gcggtctatg gaagagcaga
      961 tgggtagtct atctggtagt gaactcgacc agctcatgaa gacctatgat agtctgtcgg
     1021 aggaatttcg gctggcaggt ggatttagct atgaggcaga cattcgtgcc attttgaacg
     1081 gctttaagtt tgaccagacc atgtgggaca tgaaaatctc tgaactctcc ggcggtcaga
     1141 atactcgact ggctctggca aaaatgcttc ttgaaagccc agagttattg gtcctggacg
     1201 agccgaccaa ccacctggac atcgacacga ttgcttggtt agaaaactac ctcgtgcatt
     1261 acaagggagc cttgattatc gtcagccatg accgctattt cttggataag gtagcgacca
     1321 taacgctgga cctgaccaag cactccttgg atcgttatgt ggggaattat tctcagtttg
     1381 tcgagctcaa agagcagaag ttgcagactg agttgcagaa ctatgaaaag caacagaagg
     1441 aaattgccaa gttagaagac tttgtccaga aaaatattgt ccgtgcttcg accaccaagc
     1501 gtgctcaggc tagacgcaag cagttggaaa agatggagcg actggacaag ccgacaactg
     1561 gtcagaagtc tgccaacatg accttccagt cggacaagac ttcaggcaat atcgtcttga
     1621 cagtggaaaa tgctgcggtg ggctacgatg gagaaatact ctctcagccc atttccattg
     1681 accaaagaaa gctggatgtc attgccattg tcggaccaaa tggtatcgga aaaacaaccc
     1741 tgctcaaatc catcatcgga gctctgccat ttatcaaagg ggaagccaag ctaggtgcca
     1801 atgtggaagt aggctactac gaccagaccc agtcggccct gacgccttcc aacaccgtct
     1861 tggaggagct ctggtcagcc tttccgacca ctcctgaagt agaaatccgc aaccgtctgg
     1921 gagcctttct cttctcgggt gacgatgtca aaaagtccgt ttccatgcta tcgggtgggg
     1981 aaaaagctcg cctgctcctc gctaagctat ccatggaaaa caacaacttc ctcatcctcg
     2041 atgagccgac caaccacctt gacatcgaca gcaaggaagt gctggaaaat gccctcatcg
     2101 actttgacgg aaccctgctc tttgtcagcc acgaccgcta tttcatcaac cgcgtcgcca
     2161 ccaaggtcct ggaaatctcg gaaactggct ccacgctcta cttgggcgac tatgactatt
     2221 atctggagaa aaaggcagag ctggaagtag aagcccagcc tgaccagcta gaaagtacta
     2281 gccaatcagc cggagctatg gattaccaag ctcaaaagga aaaccaaaaa gagcaacgca
     2341 aactggcccg tcgcatcgag caaatcgagg cagaaatcga taacatcgaa aaccgcctga
     2401 gcgaactcaa ccaagccatg ctagaaacca acgacatcag tcagctaacc gattaccaga
     2461 aagaaattga ccaactgacc agccagcaag aaagccttat ggaagaatgg gaagaattat
     2521 cggaacagat ggggtaggtt gacagcaagt tgacaagagc ctcaaacact tgatagaaca
     2581 ggcttgcaag tcagtcttgc ggagttagca agaccacctt tcgctaaaaa agtccagagc
     2641 aagccagcct ttcttggcaa acattgacca acaagctaag ataagtatag agattagcat
     2701 cacttctcga aggt
//
LOCUS       DASFQS010000160         2700 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.164, whole genome shotgun sequence.
ACCESSION   DASFQS010000160 DASFQS010000000
VERSION     DASFQS010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.164"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(127..>2700)
                     /locus_tag="U1041_002171"
     CDS             complement(127..>2700)
                     /locus_tag="U1041_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEM4769245.1"
                     /translation="RAFQREVETTQRLLTSYETKLADVSSTLENHGRASSSAAQQLDK
                     LQVEQGQLASEMNKVTSQFELQESALSSNSSEAERNAIAQQKIGAQSEIVSKQISNLE
                     KQLALTKSEYGENSIEANKMEAELNQAKTALNKLNNEMDETKSSADGAQDGMKAMSDT
                     IRAEALQATSEKLADISQKIFEVGTESMSAAAQLQASNAQFSTVFGDMENAAKVALNK
                     IGEEMDIVPERLQGSFTQMASFAKTSGMDTAQALDLTTRATRAAADGAAFYDKSIEEV
                     TENLQSFLKGNYENDAALGISATETTRNAAANKLYGKSFNELSEAQKQLTLLQMVEDG
                     NELSGALGQAARESDGLENVLGNLRQSGTNALAAIGQPILEMLIPVFQSLADIVSQLA
                     TWFTNLASPIKEVVIIFTGILAVVGMILPVFLGLQVAAAAMGTTVVGMITAFLPIVGI
                     IVGIVAAITLLIVGLKELWTNHEGFRTAVTEIWNSIYAFLSMIIQQISSFVMSIWGTL
                     TTWWTENQQLILNAATTVWNAITTVIQTVMTILGPLIQASWENIKLIITAAWEMIKIV
                     VETAINVVLGIIKAVMQVITGDWTGAWETIKQVLSMAWEGIKSLISLALNFITQYIST
                     AWTGIKHTISNVLSVISSVISSIWSAIQSTISSVLSAIGSTVSTIWNGISSTVSNILN
                     GISNTVSSVWNGVKNTISNAINGARDAVSNAINAIKNLFNFQIRWPHIPLPHFRVSGS
                     ANPLDWLKGGIPRISIDWYAKGGILTKPTAFGMNGNSLMVGGEAGKEAVLPLNEQTLG
                     AIGRGIAKTMTSNLPTIHITITGNTVREETDLHRLAEMVGEKLVYELERQQGLRGVNH
                     D"
BASE COUNT          694 a          627 c          580 g          799 t
ORIGIN      
        1 gacaggcctt ggtgttctat caattgcgtc ttactttcac ttactgtgat tgaaggacta
       61 tcttccacga ttactttaaa aggaaaagaa ctcgtggaca ctccaccaat tgttaatgca
      121 ttatgtctaa tcatggttca ctcctctcaa tccttgctgg cgttctaatt catatactag
      181 tttctctcca accatctccg ctagtcgatg aaggtcagtt tcttctctta ctgtgttacc
      241 tgtaattgtg atgtgaatgg ttggtagatt gcttgtcatg gtctttgcga ttccgcgacc
      301 aattgcaccc aaagtttgct cattcaaagg caacaccgct tcttttcctg cttcaccacc
      361 aaccatcagg ctattaccat tcattccaaa tgccgttggt ttggttaaga tacctccctt
      421 ggcataccaa tcaatagaaa ttcttggaat accacccttc aaccaatcaa gaggattagc
      481 agatcctgac accctaaagt gagggagggg aatatgcggc caacgaattt ggaagttgaa
      541 gagatttttg atggcattaa tagcgttact tacggcatct ctcgctccat tgatggcatt
      601 tgaaatagta tttttcacac cgttccaaac agatgaaaca gtattggata tcccattcag
      661 aatgttggat acggtactac tgataccatt ccatatggtt gatactgttg aaccaatcgc
      721 agacaggaca ctggaaattg tcgattgaat tgctgaccag atagatgaaa tgactgaact
      781 aatgacagat agtacatttg agatggtatg cttgatacct gtccaagcag ttgagatgta
      841 ctgggtgatg aaattgaggg ctaaggaaat aagggacttg atgccctccc atgccatcga
      901 caggacctgt ttgatggttt cccaagcgcc agtccaatca ccagtgataa cctgcatgac
      961 tgccttgatg ataccaagta ccacattgat agcagtctcg accacaatct ttatcatctc
     1021 ccaagcggct gtgatgatga gtttgatatt ctcccaactt gcttggatga gcggtccaag
     1081 aatagtcatc accgtttgaa taaccgtagt gatggcattc cataccgtgg ttgcagcatt
     1141 tagaatcaat tgctggtttt cagtccacca tgtggttagc gttccccaga tggacataac
     1201 aaaactagaa atctgctgga tgatcatgga cagaaaggca tagatactat tccagatttc
     1261 cgtcacagcc gttcgaaagc cttcgtgatt cgtccagagt tcttttaacc caacaatcag
     1321 taaggtaatg gcagctacaa taccaacaat aatccccaca atcggcaaaa atgccgttat
     1381 cattccaaca acggttgtcc ccatagcggc tgccgcaacc tgtaagccca aaaaaacagg
     1441 aagtatcatc cctaccacgg ctaaaatacc tgtgaagata atgacgactt ccttgatggg
     1501 actggctaag ttggtaaacc aagttgctag ttgactaaca atgtctgcca aactttgaaa
     1561 gactggaata agcatctcca gaatcggttg accgattgct gctagagcat tagttccaga
     1621 ctgtcttaag ttacccagaa cgttttccag tccgtctgat tcccttgcag cttgtcccaa
     1681 ggctccagag agttcattgc cgtcctctac catttgaagg agggttaact gcttctgagc
     1741 ttctgatagt tcattgaagg actttccata gagtttgttc gccgctgcat tacgagtggt
     1801 ttctgtcgca gaaatgccta gagctgcgtc attttcatag tttcctttga ggaaggactg
     1861 taggttttcg gtgacttctt cgatggattt gtcgtaaaat gctgccccat cagccgctgc
     1921 tctggtggca cgagtggtca gatccaaagc ttgagccgta tccatcccag aggttttggc
     1981 aaaggaagcc atttgagtga aggagccttg aagacgctct ggaacaatgt ccatctcttc
     2041 cccaatctta ttgagggcaa ccttagcagc attctccata tccccaaata cggtagagaa
     2101 ttgggcattg ctggcttgaa gttgagctgc cgcagacatg gactctgttc cgacttcgaa
     2161 gattttctga gagatgtctg ctagcttctc actggtcgct tgaagtgcct cagcccgaat
     2221 ggtgtcagac atggctttca tgccatcctg agcaccatcg gcagaggatt tggtctcatc
     2281 catctcgttg ttcagcttat tgagtgcggt ctttgcttgg ttcaactcag cttccatctt
     2341 attggcttca atggaattct caccatattc actctttgtc agggctagtt gcttttcgag
     2401 attggaaatt tgtttagaaa caatttctga ctgtgctcca atcttttgtt gggctatggc
     2461 attgcgttct gcttcggaac tattggatga caaagcactt tcttgtaact caaattgaga
     2521 cgtgaccttg ttcatctcac ttgctaactg cccctgctcc acttggagtt tatctaattg
     2581 ttgagccgct gaactactag ctcgaccgtg attctcaagt gttgatgaca catcagctaa
     2641 cttagtttca taggaggtta gcagcctttg agtagtttcc acctcacgtt gaaaggcacg
//
LOCUS       DASFQS010000161         2662 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.165, whole genome shotgun sequence.
ACCESSION   DASFQS010000161 DASFQS010000000
VERSION     DASFQS010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.165"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            1..901
                     /locus_tag="U1041_002172"
                     /pseudo
     CDS             1..901
                     /locus_tag="U1041_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612110.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(1199..2053)
                     /locus_tag="U1041_002173"
     CDS             complement(1199..2053)
                     /locus_tag="U1041_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769246.1"
                     /translation="MRRLRQLVCCFIAVICVLSLPSLSLQAQDSFDVQVHIPLPDGID
                     ASQVSTGLEAWYIAAEEPVSSGQLADTLYEKSRSELTQHYGEPISSQALTSDGQASFQ
                     GLAKGWYYVRQVGTPTKLEVIPFVMKVDGSVLKIEAKVRRPSKETGSKTFLKVSTSTA
                     PLSGAEFVVLEEVNGELKEVNIDGNSYHVTSGSDGRFQVGPLPYGRYYLKEVQAPTGY
                     LLSHDTIPFEISSDSHVSEIVKIKNKPITPPGIEIPYTGNAVVIAVLSLGIILFLLGY
                     RLVTYTKR"
     gene            complement(2078..>2662)
                     /locus_tag="U1041_002174"
     CDS             complement(2078..>2662)
                     /locus_tag="U1041_002174"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:NF027869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4769247.1"
                     /translation="FVKTDDATEANSALKLTGAEFVVTNEQGQFLALKGADAQAEAIK
                     EYKAAEEAYVTAVKNNVGDIETLKATRNAKYEAMNMQWEWVDGQDKAFTFVSSEDGKF
                     EVKGLKAGNYSLVETKAPDGYALLTSAVPFVVAPNSWTTATDTPIEGHQRVENKKVTI
                     PQTGGIGTVVFTVVGLSTMVFAYIALKKRQSEEA"
BASE COUNT          761 a          565 c          552 g          784 t
ORIGIN      
        1 cttacctcag atgctagagg aggtcgtcgc cacgcttata tgacagttga agaagaagct
       61 tttttgagcg agcagttagc gtctgctgtc aacggagatt ttgtaactgt tgaatccctc
      121 tatagagctt atcaagataa acttggtcgt acgacgacta aagatggttt ttaccaacta
      181 ttgaaacgtc atggatgggt caaagaatca aaagattctt tgagacggga aataaagctt
      241 acgcagtaag caacaaaaat tagcccccgt ccagaacatc caaagaaagc agacgccgaa
      301 acgattttag cgtcaaaaaa taaaatcttt gtacaaggaa aaatcaagca agcgatttct
      361 tgaacaaaat gcctataagt aaacccggct tatatatcaa gatgaagcag ggtttggtcg
      421 gattagtaaa ctgggggcat gttggagtcc taaaaactac cgtccgaata tctcaagcca
      481 tcatatccga gaatttcgtt actgctatgg tgcggcagat gcacacacag gggaatcttt
      541 cttcataata gctggtggtt gtaataccgc ttggatgaat gaatttttac gtcaattatc
      601 aaaagcttat cccgatgacc acatcatttt agtcatggac aatgccattt ggcataaatc
      661 tcaggcactt gaaattcctg ataatattgc atttacgttc ataccaccat ataccccagg
      721 gatgaatccg attgaacaag tttgggcaga aatccgcaaa cgcggattta agaacagagc
      781 ctttcaaaca ttggagtcag tcattgataa gctccaagaa atcattcaag ggttagatag
      841 tgaaactata aaaagtattg tacatagaaa atggatttgt tcagattttg aaatcgaata
      901 agcatcattt ctgcttttct tctcaaagcg gcaagattgg ggaatagtca atgggacgat
      961 gggctgtgac ataaaaaaat cctccagtta tgtttttcta acaatatact ggaggaggga
     1021 gtgattagat agataccttg ttattgggcg gttacgaatg attggatagg taccttgtta
     1081 tggggcggtt acggttaccc tagtacgagc aacgcctctc ctttaaaccg aaaaaatccc
     1141 attgccacag attcaacctg acaatgagat tttttctttg ttcttagtct gtcaggcact
     1201 atcgtttcgt ataagtaacc aaacgatagc ccagcaagaa gaggataatg cctaacgata
     1261 aaaccgctat gaccaccgca ttccctgtat atggaatctc aataccgggc ggtgtgatgg
     1321 gcttgttctt gatttttaca atctcagaaa catgggaatc cgagctaatc tcaaacggta
     1381 tcgtatcgtg agacagaaga taccctgtag gtgcctgcac ctcctttagg taataacgac
     1441 cataaggaag aggacctact tgaaaacgac catctgagcc tgaagtgaca tgataagaat
     1501 tgccgtcgat attcacttcc ttcagttctc cattcacttc ctcaaggact acaaactctg
     1561 cccctgataa gggagcggtg cttgttgaga ccttcagaaa ggtcttactg cctgtttcct
     1621 tgcttggtct tctgactttt gcctcaatct tcaacacact tccatctacc ttcatgacaa
     1681 atggaatgac ttcgagtttt gtaggagtcc ctacttgtcg aacgtaatac catcccttag
     1741 ccaagccctg aaagctggct tgaccatctg aagtgagagc ctgtgaggaa attggctcac
     1801 catagtgctg tgttaattct gaccgacttt tttcatataa agtatctgcc aactgtccag
     1861 aagagactgg ctcttctgca gcaatatacc aagcctccaa gccggtcgac acttgactgg
     1921 catctattcc gtctggaaga ggaatatgaa cctgaacatc aaaggagtct tgtgcttgga
     1981 gtgaaagtga gggcagtgat agtacacata taactgctat aaaacaacag actagctgtc
     2041 taagtcttct catctgtccc tccttttcta ttcctgatta tgcttcttca gattggcgtt
     2101 ttttcaaagc gatgtaggca aataccattg tactcaaacc tacaactgta aatacaactg
     2161 taccgatacc acccgtttgt gggatggtta cttttttgtt ttctacgcgt tgatgacctt
     2221 caattggtgt atctgtagct gttgtccagc tattaggagc aacgacaaat gggactgctg
     2281 aagtaagaag tgcatagcca tctggtgctt tggtttcgac aaggctgtag ttaccagctt
     2341 tcaaaccttt gacttcaaat ttaccatcct ctgatgatac gaatgtgaag gctttatctt
     2401 gtccgtcaac ccattcccac tgcatattca tagcttcgta tttggcatta cgagtcgctt
     2461 ttaatgtttc aatgtcacca acgttatttt ttacagctgt tacataggcc tcttctgctg
     2521 ctttatattc cttgattgct tctgcttgtg catctgcacc tttcaaggca aggaattgac
     2581 cttgttcgtt tgtcactacg aattctgcgc cagttagttt gagagcagaa tttgcttcgg
     2641 ttgcgtcatc tgttttcaca aa
//
LOCUS       DASFQS010000162         2619 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.166, whole genome shotgun sequence.
ACCESSION   DASFQS010000162 DASFQS010000000
VERSION     DASFQS010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.166"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            166..711
                     /locus_tag="U1041_002175"
     CDS             166..711
                     /locus_tag="U1041_002175"
                     /inference="COORDINATES: protein motif:HMM:NF018515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage scaffolding protein"
                     /protein_id="HEM4769248.1"
                     /translation="MKREFLAGLELPDEQIDKIMAEHGKTMADTKSKLTAAEEQVSTL
                     QVDLSTANETITNLQKSNADNAELQKSIEDYKNQLEEAQNQRAIDRKDAFIELGLTKA
                     GVRNSKAAKALLDLEKITESENGFDGFDEQLKALQESDAYLFQIAEDKPEPTPQITTS
                     GNPVIDATDSDPFQAIIDSYK"
     gene            726..1613
                     /locus_tag="U1041_002176"
     CDS             726..1613
                     /locus_tag="U1041_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001139822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HEM4769249.1"
                     /translation="MSTTNQNLPVRQYAPQYRQILSTVFDATKAFSGVLAPIQTLDGV
                     QFNSKAFSVKTNATPVVVGTYNTGENVVFGTGEDGNSRFGNLTEVIYADHDVEYDYTL
                     AIHEGIDRYTVNNDLNAAIADRLKLQSEAQTRQMNKRIGKFLSDNAGSTEALADFTED
                     SIKKLFNKINAYVINTEIIAPIKAYVRAELYNAIIDMASVTTAKGSSVSLDNNGLAKY
                     KNVTLIETPAQYFAEGTIAIFAPDGIVIPFVGIQTARTIEAQEFDGVKFQAAAKGGTF
                     VLDDNKKAIVKVTGTIVGG"
     gene            1615..1797
                     /locus_tag="U1041_002177"
     CDS             1615..1797
                     /locus_tag="U1041_002177"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769250.1"
                     /translation="MASYLSTKNIFLKPENQMILDGEVIELTSERAEEILEEVPGSLV
                     ALEKESKTARRKKADK"
     gene            1829..2221
                     /locus_tag="U1041_002178"
     CDS             1829..2221
                     /locus_tag="U1041_002178"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769251.1"
                     /translation="MDYLTFEEVAEFLGGARVSEDDFAQYGKKAEEVVDQLTNYHYQF
                     NSLSDDPVSFRVKQFKKAICMQLLYFADMQADTFEGLNREPEHISIGRTSISKSGKTG
                     TGNSRTVSLIAQEVPGCLSGTGLLYRGI"
     gene            2223..2564
                     /locus_tag="U1041_002179"
     CDS             2223..2564
                     /locus_tag="U1041_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002313615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM4769252.1"
                     /translation="MRMPKPPIEILNETVGYLEYIGEGDYNKREYGDEQTIHHVRIDR
                     SSKYSWNGKSKEIQYKAVVLCYQGLTTPLPIFKKQSILRFDGVDHVIINVITNKEPFK
                     DALYSIELEVL"
BASE COUNT          874 a          463 c          561 g          721 t
ORIGIN      
        1 tgacaaggtt tctaagaaat cttggtttaa tcgtaaataa aacataagtc gtagcgatac
       61 ggctttttat tatgcaaaaa actcgtccgg catgacgtta aactgtacag catacaatca
      121 aatctcgtgg tcgtcacacg ttaactagac gtagaaggag agcgtatgaa acgtgaattt
      181 ttagcaggac ttgaattgcc cgatgaacag attgataaaa tcatggcaga gcatgggaaa
      241 accatggctg ataccaaatc taaactgact gcagcagaag aacaagtatc aactctccaa
      301 gttgatttat caacagcgaa tgagacaatt acaaacttgc agaaatcaaa cgcagacaac
      361 gcagaattgc aaaaaagcat cgaagattac aaaaaccagc ttgaagaagc ccaaaatcaa
      421 cgtgctattg atcgcaagga tgcgtttatc gaacttggct tgactaaggc aggtgtacga
      481 aacagtaaag cagctaaagc tttgcttgat ttagaaaaaa tcacagaatc agagaatggt
      541 tttgatggtt ttgacgagca gttaaaggct ttgcaagaaa gcgatgccta tctgtttcag
      601 attgctgaag ataagcctga accaacaccg cagattacta cgtccggtaa tccagtcatt
      661 gatgctactg attcggatcc gttccaagca atcatcgatt cttataaata gagaggaaaa
      721 aactaatgtc tacaacaaat caaaatttac cagtgcgtca atatgcacct caatatcgcc
      781 aaattttatc cactgtcttt gatgctacaa aagcattttc tggcgtctta gcaccaatcc
      841 agactttaga tggtgtacag tttaactcta aagctttctc tgttaaaaca aatgccactc
      901 ctgtagtagt tggaacatat aacacagggg aaaatgttgt gttcggaaca ggtgaagatg
      961 gaaattctcg ttttggtaac ttaacagaag taatttatgc tgatcatgat gtcgagtatg
     1021 actacacact tgctattcat gaggggattg accgctacac agttaataat gacttaaatg
     1081 cagctattgc tgatagattg aaattacaat cggaggctca aactcgccaa atgaacaaac
     1141 gtattggtaa gttcttgtct gataatgcag gcagcacaga agcgcttgct gactttacag
     1201 aagatagtat taagaaactt tttaataaaa tcaatgccta tgttataaat actgaaatca
     1261 tcgccccaat taaagcttat gttcgtgcag aattgtataa cgccattatt gatatggcaa
     1321 gcgttacaac ggcaaaagga tcttctgtat cgctcgataa taacggtctt gcaaaatata
     1381 aaaatgttac tttgattgaa actccagctc agtactttgc agaaggaact atcgctattt
     1441 ttgctccaga tggtattgtt attccttttg ttggtatcca aacagcacgt accattgaag
     1501 cgcaagaatt tgatggtgta aaattccaag ctgccgctaa aggtggaaca tttgtgcttg
     1561 atgataataa aaaagctatc gttaaagtaa caggaacaat tgtcggagga taatatggca
     1621 tcgtatctat ctacaaaaaa tatcttttta aaaccggaaa atcagatgat tcttgatggt
     1681 gaggttattg agcttacttc agaacgagcc gaagaaattc ttgaggaagt gccaggtagc
     1741 ctagttgctc tagaaaaaga aagtaaaacc gctcggcgta aaaaggcaga caagtagtct
     1801 gcctttgcgt ctagagaggg ggagtgttat ggactactta acgtttgaag aagtcgcgga
     1861 gttcttgggt ggtgctcgag tgtcagaaga tgattttgcg cagtacggaa aaaaagctga
     1921 agaagttgtt gatcagttga caaactatca ctatcagttt aatagtctaa gcgatgatcc
     1981 tgtctcgttt cgagtaaagc agttcaaaaa agctatctgt atgcagttgc tttattttgc
     2041 agatatgcaa gccgatacat ttgaagggct aaatcgtgag ccagaacaca tcagtattgg
     2101 ccgtacttct atttcaaaat caggcaaaac aggaactgga aattctagga cggtttcttt
     2161 gatagctcaa gaagtacctg gctgtctatc tggcacaggt ttgctttaca gggggatttg
     2221 atatgagaat gccaaagcca cctatagaaa tcttgaatga aactgtcggc tatttggagt
     2281 atatcggaga aggcgattat aacaaacgag agtatggtga tgaacagaca attcaccatg
     2341 ttcgaatcga ccgctcatcg aaatattctt ggaacggaaa gagcaaggaa atccagtata
     2401 aagcagttgt gctatgttac caaggattga ctactccgtt acctattttt aaaaaacagt
     2461 caatacttcg ttttgatggg gtcgaccatg ttatcatcaa tgtgattacg aataaggaac
     2521 catttaaaga cgcgctgtat tctatagaat tggaggtgct atagtgtcta tttcgattca
     2581 agttgatttg aagggggcaa aaaagaaact gagcgacca
//
LOCUS       DASFQS010000163         2573 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.167, whole genome shotgun sequence.
ACCESSION   DASFQS010000163 DASFQS010000000
VERSION     DASFQS010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.167"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(141..>2573)
                     /locus_tag="U1041_002180"
     CDS             complement(141..>2573)
                     /locus_tag="U1041_002180"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012948.1,HMM:TIGR04320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HEM4769253.1"
                     /translation="MASTIETPVTTEAPAAETTVVETPKTAADVKPALDAQQAIVDAT
                     AQDATNAQADADAANQAIATAQADVDTATQAVKDAEANATNATPENIAANQADQVANL
                     ADQTANATETDQVNAEIADQTGKVADAQTAVDTAQAEKDAADANVTAKEADVKAAQDA
                     LSGTGLAEAQANLDNASKAVTDANANVDTATQAVEDAKKADADRDAKIKDAETEVAVK
                     SDAVDTAKAKLTAAQDESKTTTDALNKTNDAVKTATKALANVDVVTVNVDSNFKSDLD
                     NWKKDPSEDNADFLKDSGFNSISASTLKVGADDAKSAVDVNNLTKDNQLDMSFIYVDA
                     VNQLRKQLGIQTVATVTDNAITIAQNRANQYKQRGTDPVTTGHIPGAIENLARLGSID
                     TLKTVEDIKNAAWQAFLATSFDDSKSNWNHLTPNMYANGGIGLSIANINGQYWLVAVL
                     ANDGTPITDPNDPATLQAALAKAQADQSAAQAASDTAQANLVKASSDYAKALELKTQA
                     EKVLADATATPLQTQVAENNLRLATIALQNAEARKTDAQKAVDNFSANLAEKKAALDT
                     AKAELATAQATATAKAEALKTAQANLATQQATLDSLNKERDALLAEKDRLVEEAKALA
                     EELDGYMNAPAILANAQATLTAKQAALTEAKAKAETAQTKLETVTAKLAEEQAKLAEL
                     KAEYNKLKDLEDKAKDNVIATLPDGTIVAVPKDASTTAEKPAINIDAVKDAITKGQDV
                     TVVDGEVVVTNPQAGVTVTQTTTGEKATYSRVERAKTLPNTGAQTSLLAIAGVAALSS
                     LGLASARRRKQG"
BASE COUNT          555 a          501 c          597 g          920 t
ORIGIN      
        1 accgtcttca cttttctact catctagtat atcatatttc attcctaaaa attgttggaa
       61 tagcgtagtc tttccgaaat tttttggaat ccaaaaaatc ttcctactgt taagtaagaa
      121 gattttttca tttttgctat ctatccttgt ttgcgtcttc ttgcgcttgc aagaccaaga
      181 ctagacaatg ctgccacacc tgcgattgcc aacagacttg tttgcgcccc tgtgtttggc
      241 aaggtcttag cacgttcgac acgtgagtag gtcgcttttt ctccagtagt tgtttgtgtg
      301 acggtgacac ctgcttgtgg gttcgtcacc acaacttcac cgtcaacaac tgttacatct
      361 tgacctttag taatagcgtc tttgactgca tcaatattga tagctggttt ttcagcagta
      421 gttgatgcat cttttggtac tgcaacgatt gttccgtctg gaagtgttgc aattacattg
      481 tcttttgctt tgtcttcaag gtctttgagt ttgttgtact ctgctttaag ttcagctagt
      541 ttagcttgtt cttcagctag tttagcagta acagtttcaa gtttagtttg tgcagtttca
      601 gctttagctt ttgcttcagt aagagccgct tgttttgctg tgagagttgc ttgagcgtta
      661 gcaagaatag ctggtgcgtt catgtaacca tcgagttctt cagcaagtgc ttttgcttct
      721 tcaaccaagc ggtctttttc tgcaagaagt gcgtcacgct ctttgttcaa gctatcaagt
      781 gttgcttgtt gtgttgcaag gttagcttga gctgttttaa gagcttcagc ttttgcagtt
      841 gcagtagctt gtgctgtagc aagttcagct ttagcagtat caagagctgc tttcttttca
      901 gcaagatttg ctgagaagtt gtcaacagcc ttttgtgcgt ctgttttgcg tgcttcagca
      961 ttttgaagtg caatggttgc aagacgtagg ttattttctg ctacctgtgt ttgaagcggt
     1021 gttgcagttg catcagcaag gactttctct gcttgagtct tcaattcaag agctttagcg
     1081 taatctgagc ttgcttttac aagatttgct tgagcagtat cggatgcggc ttgtgctgct
     1141 gattggtctg cctgagcttt agcaagggca gcttggagag tagctgggtc gttagggtcg
     1201 gtgattgggg tgccgtcatt tgccaataca gcaacgagcc agtattgacc attgatgttt
     1261 gcaattgaaa gaccgatacc accgttagca tacatgtttg gagtcaagtg attccaattt
     1321 gatttgctgt catcaaatga tgttgcaagg aatgcttgcc atgccgcatt tttgatatct
     1381 tcaacagttt taagagtgtc aattgaacca agacgtgcaa ggttttcaat tgctcctgga
     1441 atgtgaccag ttgttactgg gtctgttcca cgttgtttat attggttggc acggttttgt
     1501 gcgattgtga tagcattgtc tgtgacagtc gcaactgttt gaataccaag ttgtttacgc
     1561 aattggttta cagcatcaac gtagatgaat gacatatcca attggttgtc tttggtcaag
     1621 ttgttaacat caacggcaga ttttgcgtca tcagctccta ctttaagagt tgaggctgaa
     1681 attgaattga aacctgaatc tttcaagaaa tctgcattgt cttcagatgg gtcttttttc
     1741 cagttatcca aatcagattt gaagtttgaa tcaacgttaa ctgttacaac atcaacattt
     1801 gccaaagctt ttgttgcagt tttgacagcg tcatttgttt tattgagtgc gtcagttgtt
     1861 gttttagact catcttgagc agctgtcaat tttgcttttg ctgtatcaac agcgtctgat
     1921 tttacagcaa cctcagtttc agcatctttg atttttgcat cacggtctgc gtcagctttc
     1981 ttagcatctt caacggcttg ggttgcagta tcaacgttag cgttagcatc tgtaacagct
     2041 ttgcttgcat tatcaaggtt agcttgagct tcagcaagac cagtaccaga aagggcgtct
     2101 tgtgctgctt ttacgtcagc ttctttagca gttacgttag catcagcggc gtctttttct
     2161 gcttgagcag tatcaaccgc agtttgagcg tctgcgactt taccagtttg gtcagcaatt
     2221 tcagcgttaa cttggtcagt ttcagtagcg ttagcagttt ggtctgcaag gtttgcgact
     2281 tggtcagctt ggtttgctgc aatgttttct ggtgttgcat ttgttgcatt agcttcagca
     2341 tctttgactg cttgtgttgc agtatcaacg tctgcttgag cagtagcaat agcttggtta
     2401 gcggcgtctg catcagcttg agcgttagtt gcatcttgag cagtagcatc aacaatagct
     2461 tgttgagcat caagagctgg tttgacatca gcagcagttt taggtgtttc gacaacagtt
     2521 gtttccgcgg ctggtgcttc agttgtaact ggtgtttcaa tggttgatgc cat
//
LOCUS       DASFQS010000164         2519 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.168, whole genome shotgun sequence.
ACCESSION   DASFQS010000164 DASFQS010000000
VERSION     DASFQS010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.168"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            59..817
                     /locus_tag="U1041_002181"
     CDS             59..817
                     /locus_tag="U1041_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEM4769254.1"
                     /translation="MENTPRLNLVIDVLMLAGAILAQSGAEIHRVEDTMIRIAHSQGI
                     EQANVLAIPAAIFFSIDHTNISRMKRIVNSNYDMQKVCDVNQISRSLANEEISLEEAW
                     SQLNAIKQQKPPYNNIQITLAAVVAAPFFTIMFGGSLLDAAGAVLATALAFPISLIVD
                     RYIGIDFVTTFVGAFVFSLTSYLLSATTTFPINPNLINAGAVMPFVPGIAFTNAVRDL
                     MTNHINTGMTKFFQTALIILSLGAGTTVAFMLVR"
     gene            821..1273
                     /locus_tag="U1041_002182"
     CDS             821..1273
                     /locus_tag="U1041_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEM4769255.1"
                     /translation="MTPVHFLLQALASYIAIATFLIVLNVQRKMLVPGGLLGMLVWLI
                     YLLLLEPTNVLIATFFAAIIGSCVSQIMSIWLKTPSVIFSLAILAPLVPGYRAYMTTT
                     YFVSGDHAHALTNITTVLTLALVIPIGMASGTILLRLYKVLRTGKKAA"
     gene            1330..>2519
                     /locus_tag="U1041_002183"
     CDS             1330..>2519
                     /locus_tag="U1041_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000813920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM4769256.1"
                     /translation="MNQNVTNLKLAERGALLSIGAYIVLSGIKLVAGQLFHSDALRAD
                     AFNNISDIIGNIAVLVGLKMAQKPADTDHKFGHWKMEDLASLITSFIMFVVGFQVLYD
                     TLQKLISNSSIEVDITGAIVGIFSALVMLAVYLYNNRLAKKVRSKALEAAAKDNLSDA
                     VTSIGTSIAIFAAAFNFPVVDKIAAIIITFFILKTAYDIFMESFFTLSDGFDEELLHK
                     YEEDILKLPKIVSVKSQRGRTYGANIYLDVVLEMNPDLSVYESHEVTEQVEQLLTLKH
                     GVFDVDIHVEPSEIPHDEMYEHVYDKLFRFETEIQAHANGYEELIDDQYLLIDAKGRY
                     RNKTQMLANHPIQTTYLSNYQMTSISQKSKLVTFEIGDYVHTSLWRRHENWTVIFHQI
                     SKKQA"
BASE COUNT          728 a          578 c          452 g          761 t
ORIGIN      
        1 ctacacctat attttgttat aattaagaaa ataactagca gagggatggg acttacttat
       61 ggaaaacact cctagactaa acttggtcat agacgtgctc atgctcgctg gtgcgatttt
      121 ggcacaaagc ggtgcagaaa ttcaccgagt tgaagatacc atgattcgga ttgcacattc
      181 acaaggaatt gaacaggcca atgtccttgc catccctgct gctatctttt tctccatcga
      241 ccatacgaat atttcgcgta tgaaacgcat tgtcaattca aattacgaca tgcagaaagt
      301 ttgtgacgtc aaccaaatct cccgttccct agccaatgaa gaaatcagcc tggaagaagc
      361 atggagccaa ttaaatgcaa tcaaacaaca aaagccacct tataacaata tccaaataac
      421 cttagctgcc gtagtagccg cacctttttt taccatcatg ttcggaggtt ctcttttaga
      481 tgcagcaggt gctgtcctcg caacagcttt agctttccct atctcactaa ttgtcgatcg
      541 ctatattgga attgattttg tcaccacctt cgttggcgcc tttgtcttct cactcacctc
      601 ttatttatta agcgcaacca ctactttccc cattaatcct aacctgatta atgcaggggc
      661 agtcatgcct tttgtaccag ggattgcttt tacaaatgct gtaagagacc taatgaccaa
      721 tcatatcaat acagggatga ccaaattttt ccaaacagcg cttattatct tatcgctcgg
      781 tgcaggtaca actgtggcct ttatgcttgt gaggtaatct atgacaccag ttcacttctt
      841 attacaggca ctcgcctctt atatcgctat cgcaaccttc ttaattgttc tcaatgttca
      901 aagaaaaatg ctggtccctg gtggactcct aggcatgctt gtttggctta tttatctttt
      961 actattggaa ccaacaaatg tcttgattgc tacctttttc gcggcaatta tcggatcctg
     1021 tgtcagtcaa atcatgagta tttggttaaa aacaccctcc gtcatctttt cattggctat
     1081 acttgcaccg cttgttccag gctatcgagc ctacatgacc acgacttatt tcgtttctgg
     1141 ggaccacgct catgccctaa ccaatatcac taccgtctta actttagcct tagtcatccc
     1201 catcggtatg gccagcggaa caatattatt acgcctttat aaggttcttc gaaccggcaa
     1261 aaaagcagcc tagccccttg aaaataaggg gcctttttgt taaaatgaaa acttatcaaa
     1321 ggagatgcta tgaaccaaaa cgtaaccaat ctaaaacttg ctgaacgtgg tgccttgcta
     1381 tctatcggtg cctatattgt cttatcaggt atcaaactcg ttgcaggaca gctctttcat
     1441 tcggatgcct tacgagcaga tgccttcaat aatatttctg atattatcgg taatatcgct
     1501 gtacttgttg gactaaaaat ggcacagaaa ccagctgata ccgatcataa atttggacac
     1561 tggaaaatgg aagacttggc aagcttgatt acatccttca tcatgtttgt cgttggtttc
     1621 caagtactct atgataccct ccaaaaacta atcagcaatt cttctatcga agtagacatt
     1681 acgggggcca ttgtcggaat tttttctgca ctagttatgt tagctgttta tttatataat
     1741 aaccgcttgg caaaaaaagt acgttccaag gccttagaag cagctgccaa ggataaccta
     1801 tccgatgcag tcacttccat aggaacttct atcgcgatct ttgctgcggc tttcaacttc
     1861 cctgttgtcg ataaaattgc agccatcatc attaccttct ttatcctaaa aacagcctac
     1921 gatattttta tggaaagctt ctttacctta tctgatggat ttgatgagga acttctccac
     1981 aagtacgaag aagatattct caaactccca aaaatcgttt ctgtcaaatc acaacgtggt
     2041 cggacttatg gagccaatat ctaccttgat gttgttttag aaatgaatcc agacttatcc
     2101 gtttatgaaa gtcatgaagt gactgagcag gttgagcaac tcctaacact caaacatgga
     2161 gtttttgatg tggatattca cgtagaacca tctgaaattc cacacgatga gatgtatgag
     2221 catgtgtacg acaaactctt ccgttttgaa acagagatac aagcacatgc taatgggtat
     2281 gaagaattga ttgacgacca gtatctctta attgatgcca aaggccgcta tcgaaataaa
     2341 actcagatgc ttgccaacca ccccatccaa accacgtatt tatccaatta ccaaatgacc
     2401 tccattagcc aaaaatcaaa attagttacg tttgaaattg gtgattatgt tcatacgtca
     2461 ctttggcgcc gtcatgaaaa ttggacagtt attttccacc agatttcaaa gaaacaagc
//
LOCUS       DASFQS010000165         2430 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.169, whole genome shotgun sequence.
ACCESSION   DASFQS010000165 DASFQS010000000
VERSION     DASFQS010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.169"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..637
                     /locus_tag="U1041_002184"
     CDS             <1..637
                     /locus_tag="U1041_002184"
                     /inference="COORDINATES: protein motif:HMM:NF013772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEM4769257.1"
                     /translation="EIPRIIELIEPCEEYPNGALIYKMIKGHTFRKEHIEIVNLDNIA
                     KKLAEFMDELYEIRVDFDKDEYIKNELEITEQSVIELKEYLSESNYEKILSWFNEYKN
                     YLLTFNDYHFIHGDLWYENYILNDNNELVGIVDFEGSGMGDSAYDIAALYYLGTGFIN
                     KVLSYYKYTDEDLIKRVSMLIKAREIADFDDMVKNYPEEVEEQVDKIKKVL"
     gene            complement(883..>2430)
                     /locus_tag="U1041_002185"
     CDS             complement(883..>2430)
                     /locus_tag="U1041_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEM4769258.1"
                     /translation="EGADLIRYFCVPCKPTKVNGGRVRNFPHHAPDKWATFIDYNRRD
                     VEVELAIKERLKNFPVPDFVWDEYLQDQIINDHGIGIDVDFVKAAIKIDAESKVKIQK
                     ELNVLTGLENPNSVLQMIGWLRDHGVATDSLDKKAVKELLKKVDETTAQVLKLRQQAA
                     KSSVSKYQAMMNCVCKDGRARGMFQFYGANRTGRWAGRLVQLQNLPQNHLPDLEEARK
                     LFKTGDLEATELLYDTQDTLSQLIRTAFIPSKGKKFIVCDFSAIEARVLSHLAGEIWR
                     SKVFEQGKDIYCMSASQMFGVPVEKHGKNSALRQKGKIAELACGYGGSVGALKAMGAL
                     DMGLTEEELQPLVNSWRQANPNIVLLWWDVDNAVKTALKDQIPTSTHGIQFEVRSGIL
                     FITLPSGRKLAYIKPRIGENQFGGESVTYEGTGTGKRWERLESYGPKFVENIVQAISR
                     DILAYSLKQLKEYKIVGHVHDEVIIECSTQQKLDEIASLMGIAPDWLSDINLRSDGYE
                     CLFYQKD"
BASE COUNT          758 a          432 c          466 g          774 t
ORIGIN      
        1 ggaaatacca agaattattg aattgattga gccttgcgaa gaatatccaa atggcgcatt
       61 aatttataaa atgattaaag gacatacttt tagaaaagaa catattgaaa tagttaattt
      121 agataatatt gctaaaaaac tcgctgaatt tatggatgaa ttatatgaaa taagagttga
      181 ttttgataaa gatgaatata taaaaaatga attagaaata actgaacaaa gtgttattga
      241 attaaaagaa tatttaagtg aatctaatta tgaaaaaata ttatcttggt ttaatgaata
      301 taaaaactat ttattaacat ttaatgatta tcattttata cacggagatt tatggtatga
      361 gaattatatt cttaacgata ataacgaatt agttggaata gtggattttg aaggctctgg
      421 tatgggtgat tctgcttatg atattgctgc actttattat ttaggaacag gttttataaa
      481 taaggtatta agttattata aatatacaga tgaagattta atcaaaagag tatcaatgtt
      541 aataaaggca cgtgaaattg ctgattttga tgatatggtt aaaaactatc cggaagaagt
      601 agaagaacaa gttgataaaa taaagaaagt tttataaatg gtggtacaaa tggatatata
      661 tgatttaatg aaacaagtta atgacgcatt caatcaaaga tactgtttca gcagtaaaag
      721 aaaaaatagt aagcggtacg gctttactat tttagacaat tcaaatttgt aggggagttt
      781 taaggctccc ctataaaaat ggctatttat caactgtttg ttgtgacata gcctaaataa
      841 ataacagaat cgccatctca attgtgaggt ggcgattttt tgctaatctt tctgatagaa
      901 taagcattcg tatccgtcgg aacgaaggtt aatatcagac aaccaatctg gtgcaatccc
      961 cattaatgat gcaatctcat caagtttttg ttgcgttgaa cattcgatta ttacttcatc
     1021 gtgtacatgg cctacaattt tatactcttt cagttgcttc aaagagtaag caaggatgtc
     1081 acggctgata gcttgtacaa tgttttctac aaattttgga ccgtaacttt cgagtcgttc
     1141 ccaacgtttg ccagttccag ttccttcgta tgtgacagac tctccaccga actgattctc
     1201 gccaattctt ggtttgatat atgctaattt acgaccagat gggagtgtaa tgaatagaat
     1261 gccgcttctt acttcaaatt gaataccgtg agtagatgtt ggaatttggt cctttaaagc
     1321 agtctttaca gcattgtcga catcccacca taagagaacg atattcggat ttgcttgtct
     1381 ccatgagttt actagtggtt ggagttcttc ctcagttagt cccatatcaa gtgcacccat
     1441 ggctttcaac gcaccgactg aaccaccata tccgcaagca agctctgcaa tttttccttt
     1501 ttgccttagt gcagaatttt ttccatgctt ttcaacaggc acaccaaaca tctgtgaggc
     1561 tgacatgcag tagatatcct taccttgttc aaagaccttg ctccgccata tctctcctgc
     1621 aagatgagac agaacacgcg cctcgatggc agagaagtca cacacgatga acttcttacc
     1681 cttacttgga ataaaagcag tacggataag ttgcgataag gtatcctgag tatcgtagag
     1741 tagttcagta gcttctaggt caccagtttt gaaaagtttt ctagcttcct caaggtcagg
     1801 aagatggttc tgaggtaggt tctggagttg cactaaacgt ccagcccaac gccctgttcg
     1861 attggctcca taaaattgaa acatccctct agcacgtcca tccttacaga cacagttcat
     1921 cattgcttgg tatttggaga cgctggattt ggcggcttgc tgacgaagtt taagaacttg
     1981 tgcagttgtt tcatcaacct ttttaagtaa ttctttaaca gcttttttgt ctagagaatc
     2041 tgttgctact ccgtgatctc gtaaccagcc aatcatctgc aggactgagt taggattttc
     2101 aagacctgtt aaaacattta gttccttttg gattttaact ttgctctctg catcaatttt
     2161 gattgctgcc ttgacaaaat caacatctat gccaatacca tggtcattga taatctgatc
     2221 ctggaggtac tcatcccaaa caaaatcagg tactgggaag tttttcagtc gttccttgat
     2281 ggccaattcg acctcaacat cacgtctgtt gtaatcgata aaggtagccc acttgtcagg
     2341 cgcgtgatga ggaaagttgc gaactcgccc tccattgacc ttagtaggct tacaaggtac
     2401 gcagaagtag cgaatgaggt cagcaccctc
//
LOCUS       DASFQS010000166         2325 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.170, whole genome shotgun sequence.
ACCESSION   DASFQS010000166 DASFQS010000000
VERSION     DASFQS010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.170"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(38..1651)
                     /locus_tag="U1041_002186"
     CDS             complement(38..1651)
                     /locus_tag="U1041_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEM4769259.1"
                     /translation="MNIITVVVTLVSALIGLVIGYFAISLKMKSAKETAELTLLNAEQ
                     EASNVRGRAEEQAEVILKTAERDRQTLKKELLLEAKEEARKYREEIAEEFKSERQELK
                     QIESRLTERATSLDRKDDNLTNKEKTLEQKEQSLTDKAKHIDEREQEVVKLEEQKALE
                     LERVAALSQEEAKEIILTDTRDKLTHEIATRIKEAEREVKERSDKMAKDLLAQAMQRI
                     SGEYVAEQTITSVHLPDDAMKGRIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFD
                     PIRREIARMTMETLLQDGRIHPARIEELVEKYRIEMDNRIREYGEAAAYEVGAPNLHP
                     DLIKIMGRLHFRTSYGQNVLRHSIEVAKLAGVLAAELGENVNLARRAGFLHDVGKAID
                     REVDGSHVEIGTELAKKYKEHPIVVNTIASHHGDVEATSTIAVIVAAADALSAARPGS
                     RRESMEAYIKRLQDLEEIANSFEGIKQSYAIQAGREIRIIVHPNKVTDDQITILAHDV
                     REKIENNLDYPGNIKITVIRETRATDIAK"
     gene            1780..2262
                     /locus_tag="U1041_002187"
     CDS             1780..2262
                     /locus_tag="U1041_002187"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEM4769260.1"
                     /translation="MKKEVTVESFELDHTIVKAPYIRLISEEVGPKGDIITNFDIRLI
                     QPNENAMDTAGLHTIEHLLAKLIRQRIDGLIDCSPFGCRTGFHMIMWGKQDSEKIAQV
                     IKSSLEEIAEGITWEDVPGTTIESCGNYKDHSLHSAKEWAKLILSQGISTDAFERKPI
                     "
BASE COUNT          659 a          553 c          425 g          688 t
ORIGIN      
        1 ttcaaacaga aagggagctg actgggctcc ctctgcatta tttagcaata tctgtcgctc
       61 ttgtttcacg aatgacagtg atcttgatat ttcctggata atccaagtta ttctcaattt
      121 tctcacgaac atcatgggcc aagatggtaa tctgatcatc agtgaccttg ttaggatgaa
      181 cgataatccg aatttcacga ccagcctgaa tagcatagga ttgtttaatc ccttcaaaac
      241 tgttagcgat ttcttccaag tcttgcagac gtttgatgta ggcttccata gattcacgac
      301 gcgaacctgg acgagcagcg ctcagagcat ctgctgcagc cacaataact gcaatagtac
      361 ttgtcgcttc tacatcgcca tggtggctgg caatagtgtt gaccacgatc ggatgttcct
      421 tgtacttctt agccaattca gtaccgatct caacgtggct accatcaacc tcacggtcaa
      481 tagctttacc aacgtcatgt aggaaaccag ctcgccgcgc taaattcaca ttctcgccca
      541 attcagcagc aagtacacct gctaatttag caacttcgat tgagtgtcga agaacatttt
      601 gtccgtaaga ggtacggaaa tgcaaacgtc ccatgatttt aatcaagtct ggatggaggt
      661 ttggtgcccc aacttcataa gcagcagctt ccccatactc acgaatacga ttatccatct
      721 ctatacggta tttctcaacc aactcctcaa tacgagctgg atgaatacga ccatcttgaa
      781 gcaaggtctc catggtcata cgggcaatct cacggcgaat cggatcaaaa cctgatagaa
      841 caaccacttc tggtgtatca tcaatgataa catcgatacc tgtgagactt tcaaaggtac
      901 gaatatttcg accctcacgt ccaataatcc gtcccttcat cgcatcatcc ggtaaatgaa
      961 ccgatgtaat cgtctgctca gccacatatt cacctgatat acgttgcatc gcttgggcta
     1021 acaagtcctt tgccatcttg tcagaacgtt cttttacttc acgctctgct tccttgatac
     1081 gagtcgcaat ttcatgcgtc agtttatcac gtgtatcggt aaggatgatt tccttcgcct
     1141 cttcttgact gagggccgcc actcgttcta actccaaagc tttttgttct tcgagtttta
     1201 caacttcttg ttcacgctca tcaatgtgct tagctttatc ggtcagactt tgttcctttt
     1261 gttccaaagt cttttccttg ttggtcaaat tgtcgtcttt gcggtccaag ctggtcgccc
     1321 gctctgtcaa gcgtgattcg atttgcttca actcttgacg ttctgactta aattcttctg
     1381 caatttcttc tcggtactta cgagcttctt ccttagcttc caagagtaat tcttttttca
     1441 aggtctggcg atcgcgctca gctgttttta gaataacctc agcttgctct tctgctcgac
     1501 cacgaacatt actagcttct tgttctgcgt ttaaaagtgt caattctgca gtttcttttg
     1561 cagatttcat cttcaaagaa atggcaaagt agccaattac taaaccaatg agagcagaaa
     1621 caagagtcac tactactgta atgatattca tatttctacc tcttttttat aattcgattt
     1681 tcacaaaatc tgtatctatt ttatcataat tgaaccgatt tcacaattcc aaattgtcaa
     1741 atatggtata ataaattcat cacttatttg gaggaaacca tgaaaaaaga agtcactgtc
     1801 gaaagcttcg agctagacca cactattgtg aaagcacctt acatccgctt aatttctgaa
     1861 gaagtcggac caaaaggaga cattattaca aactttgata ttcgccttat ccaacctaac
     1921 gaaaatgcaa tggatacagc tggtctacat accatcgagc atctattagc taaactaatt
     1981 cgccagcgca tcgatgggct aatcgactgc tctcctttcg ggtgtcggac aggtttccac
     2041 atgattatgt ggggaaaaca agactctgaa aagattgctc aagtcatcaa gtcgagtttg
     2101 gaagaaattg cagaaggcat cacttgggag gatgtcccag gaacaaccat tgaatcatgt
     2161 ggtaactaca aagaccacag ccttcattca gctaaagaat gggccaaact aatcctttct
     2221 cagggaatct ctacagatgc ctttgaaaga aaaccaatct aacaaaaaaa acggatacac
     2281 cgctcaaaac gtagacaaaa tcctaaaata taaaaaaatg aagaa
//
LOCUS       DASFQS010000167         2318 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.171, whole genome shotgun sequence.
ACCESSION   DASFQS010000167 DASFQS010000000
VERSION     DASFQS010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.171"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            50..826
                     /locus_tag="U1041_002188"
     CDS             50..826
                     /locus_tag="U1041_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM4769261.1"
                     /translation="MAIMKIEYHSEALDMSRQVTVLYPDRNRVENPDDNDIPVLYLLH
                     GMGGNQDSWLNRSTVERLVRYTNLIVVMVNTDKGWYTNTTYGMNYYDAIAVELPQILK
                     RFFPNMSDKREKNFIAGLSMGGYGTFKIAMITNRFSHAASLSGALYFDFDNPATAELG
                     SLSYWRGVFGDISDKQNPNNLLEIAKQSDKKTKFYAWCGEEDFLFEGHQKTVGELKEL
                     GFDIEASFGPGKHEWYYWNQQIEKVLAWLPIDFKLEERLS"
     gene            892..1584
                     /locus_tag="U1041_002189"
     CDS             892..1584
                     /locus_tag="U1041_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEM4769262.1"
                     /translation="MKLIGNILRWIWRTFLGLIWLSMVLACGLGLLFYFQQEAAPQML
                     QTLAQEVQLMVKGQSEVTIEEGVNTIKHLTTDTVNTADHGRWESNTATVYIETLNPTF
                     VAAYETAIANWNATGVFTFVMTSDPNQADIIATEMNDGNTQAAGEANSTTNLLTNYYS
                     SVTVRLNSFYLLNDQYGYDMDRIIHTAEHELGHAIGLDHEDSQTSVMESAGSNHGIQQ
                     ADIDAVLALYSE"
     gene            1595..1963
                     /locus_tag="U1041_002190"
     CDS             1595..1963
                     /locus_tag="U1041_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769263.1"
                     /translation="MFRTITNTIKRYPEQALLFLYNAGIFAWMQSTSHSIMEQIGIDS
                     SWFDKIPEPIKAWTGASLESMQTLLNSSAWGWLIVSMILMLVIRFVKGLIKFVIMLII
                     IGGGLYLLWQNKELLSGLKV"
BASE COUNT          691 a          404 c          532 g          691 t
ORIGIN      
        1 taagaagagc cgagggaaac tcaggctctt taccataagg agaagattta tggcaataat
       61 gaaaattgaa taccactcag aagctctaga tatgtctaga caggttacgg ttttatatcc
      121 agatcgcaat cgtgtggaaa atcccgatga caacgacatt cctgtcctat atcttttgca
      181 cggtatggga ggcaatcagg attcctggct gaatcgttct acagtggaac gattggttcg
      241 ttataccaat cttatcgtgg ttatggtcaa tacagataaa ggctggtata ccaataccac
      301 ttacggtatg aattactatg atgccattgc agtagagttg cctcaaattc tcaaacgctt
      361 tttcccaaat atgtctgaca agcgggagaa gaattttatc gctggcttgt ctatgggtgg
      421 ttatgggacc ttcaagattg ccatgataac caatcgtttt tcacacgcag cttccttgtc
      481 tggcgccttg tattttgatt ttgataatcc agcgacagca gaattgggaa gcctttcgta
      541 ttggcgagga gtatttggtg atatttctga taaacagaat ccaaataatt tgttagaaat
      601 tgctaaacaa tccgataaaa agaccaaatt ttatgcctgg tgtggtgagg aagattttct
      661 ctttgaaggg catcaaaaga cagttgggga gttgaaagag ctgggatttg atatagaggc
      721 aagtttcgga cctggtaaac atgagtggta ctactggaat cagcagattg agaaagtatt
      781 ggcttggttg ccaattgatt tcaaattgga agaaagactg tcctagtttt taagaaaagt
      841 ttcagaaatt atgactatac taaaacctat ttctagaaag aggtatagtc tatgaaactt
      901 attggaaata ttctgcggtg gatttggcgg acatttttgg gtctgatttg gttatcaatg
      961 gtgttggctt gtggtctagg tctattattc tattttcaac aggaagcagc gcctcagatg
     1021 ttacaaactc tagctcaaga agtgcaattg atggtcaaag gacagtctga agtgacgatt
     1081 gaagaaggtg ttaataccat taagcacctg acgactgata cggtcaatac agctgatcat
     1141 ggtcgatggg aaagcaatac tgcgactgtt tatattgaaa ccctgaatcc aacatttgta
     1201 gctgcctatg aaacagccat tgcaaattgg aatgcgacag gggtatttac ttttgtgatg
     1261 acaagtgatc caaatcaggc tgatattatt gctactgaga tgaatgatgg aaatacccag
     1321 gcagcaggcg aggccaattc aacgactaat ttattgacga attattatag ctcggtaacg
     1381 gtgcgtctga atagttttta tttattaaac gaccaatatg gctatgatat ggatagaatt
     1441 atccatacag ctgagcatga attgggccat gctattggcc tagatcatga agatagtcag
     1501 acctctgtta tggaatcggc aggttctaat catggtatcc agcaggcgga tattgatgcg
     1561 gtccttgcct tgtattcaga atagaaggga aaatatgttt cgaacaatta caaacacaat
     1621 aaaacgttat cctgagcaag ctctgctctt tctctataat gctgggattt ttgcatggat
     1681 gcagtctacc agtcattcga ttatggaaca aatcggtata gatagcagct ggtttgataa
     1741 aatccctgaa cctatcaagg cctggacagg tgccagtcta gagagtatgc aaaccttact
     1801 caattcttcc gcttggggat ggctgattgt atctatgata ttgatgttgg tcatccgctt
     1861 tgttaagggc ttgatcaagt ttgtcatcat gctgattatt atcggcggtg gtctttatct
     1921 actctggcag aataaggaat tgcttagcgg attgaaggta taaaaatcac aaaagaaaaa
     1981 aagaagctga gtaagccatc ttagatgtct gctcagcttt tttgacttat aatattcttc
     2041 gaaaatcaaa ctcagtcgtt gttgacttga tttgatgagt gaaagtggag cgggaaagaa
     2101 gtcgaccaag ataaaaagag ttcgtcaaca atttttcgtt tttagttgtt gagctgagat
     2161 gttgacacga accctgagaa gcgaggttgg tcttgagccc agcctcagtc agcctgttac
     2221 cttgaaacaa aatagtaaca gggttctatc tgcataagta gaaacgaact acgttcgcat
     2281 atctccaacc tcccaaggtt cccaaacctt ttgtagcg
//
LOCUS       DASFQS010000168         2219 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.172, whole genome shotgun sequence.
ACCESSION   DASFQS010000168 DASFQS010000000
VERSION     DASFQS010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.172"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            53..235
                     /locus_tag="U1041_002191"
     CDS             53..235
                     /locus_tag="U1041_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019320686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HEM4769264.1"
                     /translation="MPFVRIDLFEGRTEEQKIALAREVTEVVSRNTNAPKEAIHVFIN
                     DMPEGTYYPQGEMKRK"
     gene            complement(283..2115)
                     /gene="lepA"
                     /locus_tag="U1041_002192"
     CDS             complement(283..2115)
                     /gene="lepA"
                     /locus_tag="U1041_002192"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017645216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEM4769265.1"
                     /translation="MNLEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSRE
                     MQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPIINKIDLPAADPERVRQEIEDVI
                     GLDASEAVPTSAKAGIGIEEILEQIVEKVPAPTGDVEAPLQALIFDSVYDPYRGVILQ
                     VRIVNGVVKPGDTIQMMSNGKTFDVTEVGIFTPKAIGRDYLATGDVGYIAASIKTVAD
                     TRVGDTVTLAENPASEPLAGYKQMNPMVFAGIYPIDSNKYNDLREALEKLQLNDASLQ
                     FEPETSQALGFGFRCGFLGLLHMDVIQERIEREFNIDLIMTAPSVVYHVNMTDGEMID
                     VANPSEFPDPTKIATIEEPYVKAQIMVPQEYVGAVMELAQRKRGDFVTMDYIDDNRVN
                     VIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRSSKLVKMDILLNGDKVDALSFI
                     VHKEFAYERGKIIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGG
                     DVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDEDDKK"
BASE COUNT          600 a          512 c          475 g          632 t
ORIGIN      
        1 atttaccgaa atttatgcta tactgaaact agcaaaataa aggaggaaat atatgccatt
       61 tgtacgtatt gatttgtttg aaggacgcac tgaggagcaa aaaatcgccc tagcccgcga
      121 agttaccgaa gtggtatccc gcaataccaa tgctcccaaa gaagccattc atgtcttcat
      181 caatgatatg cctgagggaa cttactaccc acaaggcgag atgaaacgca aataagagaa
      241 aacactcttg ccagaatgca ggagtgtttc tttgtatcaa gtttatttct tatcgtcttc
      301 atccatgctg agaacactga ggaaggcttc ttgtggaact tcgacagagc cgatggcttt
      361 catccgtttt ttaccagctt tttgcttttc taggagtttg cgtttacgag aaacgtcacc
      421 accataacac ttggccaaaa cgttcttccg aagagccttg atgtcgctac gggcaacaat
      481 tttctgaccg atagctgctt gtattggtac ttcaaactgt tgacgtggaa taattttctt
      541 gagcttatcc acgataattt tcccacgttc gtaggcaaat tccttgtgga caataaagct
      601 gagagcatcg accttatcgc cattgaggag aatatccatt ttcaccaact tggatgaacg
      661 gtattcagaa atctcatagt cgaagctggc ataaccacga gtggacgact taagcttgtc
      721 aaagaagtca aaaacaatct cagccaaggg aatttgataa ataacattga cacgattatc
      781 atcgatgtaa tccatagtca caaagtcacc gcgtttgcgt tgggccaatt ccatgactgc
      841 accgacgtat tcctgtggta ccatgatttg tgccttaacg taaggctctt cgatagtggc
      901 gatcttggtt gggtctggga attcggatgg gttggctaca tcaatcattt caccatccgt
      961 catgttgaca tggtaaacca ccgacggtgc tgtcatgatg aggtcaatgt taaactcacg
     1021 ctcaatccgt tcttggataa catccatgtg caagagccct aagaagccac aacggaaacc
     1081 aaagccgagg gcctgtgatg tttcaggttc gaactgcaag ctggcatcgt tgagctggag
     1141 cttttccaag gcttcacgga ggtcattgta cttgttggaa tcgattggat agatacctgc
     1201 aaagaccatt gggttcatct gcttgtagcc cgctagtggc tcgctagcag gattttctgc
     1261 caaagttacc gtatcaccga cacgggtgtc agcaaccgtc ttgatagagg ctgcaatgta
     1321 acctacatca ccagtcgcca aataatcacg accgattgct ttgggtgtga agatacccac
     1381 ttccgtcaca tcaaaggtct tgccattgct catcatctga atagtatcgc caggttttac
     1441 cacaccgttg acaatacgaa cttgcaggat aacgcctcga tacggatcgt aaaccgagtc
     1501 aaaaatcaag gcttgcaatg gagcttcaac gtcaccagtc ggtgctggaa ctttctctac
     1561 gatttgctcc aagatttcct cgataccaat acctgccttg gctgatgttg gcactgcttc
     1621 tgaggcatcc aaaccaatca catcttcgat ttcctgacgg acacgttctg ggtctgctgc
     1681 tggcaggtca atcttgttaa tgataggcaa gatttccaaa tcattgtcca aggccagata
     1741 aacgttagcc aaggtctgtg cttcaatccc ttgggctgca tccaccacca agattgctcc
     1801 ttcacaggca gctaaggagc gagatacttc ataggtaaag tccacgtgtc ctggtgtgtc
     1861 aatcaagtgg aaaatgtatg tctctccatc tttagctgta tagttgagtt cgattgcgtt
     1921 gagtttaatt gtgataccac gctcgcgttc taagtccata ctatccagca actgggcttg
     1981 catttcacgg ctggaaactg tttccgtctt ctcaagaata cggtcagcca aggttgattt
     2041 accatggtcg atgtgggcaa taatggagaa attacgaatt ttctcctgtc gttttttcaa
     2101 atcttctaaa ttcatgtttc ttcctctaca agggtattac tcctcattat atcagattta
     2161 gtgataattt tccataagaa aaaacaccta gaaactaggt atctgctctg ctattttcc
//
LOCUS       DASFQS010000169         2219 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.173, whole genome shotgun sequence.
ACCESSION   DASFQS010000169 DASFQS010000000
VERSION     DASFQS010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.173"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..656)
                     /locus_tag="U1041_002193"
     CDS             complement(<1..656)
                     /locus_tag="U1041_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HEM4769266.1"
                     /translation="MHKFWNFTDDDSGRTLRIEGQIADETWFGDEITPQVFKNDLHAG
                     SGNITLWINSPGGDVFAAAQIYNMLMDYKGDVHVVIDGLAASAASVIAMAGATVSMSP
                     VAMMMIHNPWTVAQGEAKDMQKVIEMLGEIKESIINAYELRTGLSRTKLSHLMDSESW
                     FNAKKAVELGFADKILFDKQEEHGMESESYSFSRNAAQQDLLVKMQAKLEVQQPKKTI
                     P"
     gene            complement(649..1932)
                     /locus_tag="U1041_002194"
     CDS             complement(649..1932)
                     /locus_tag="U1041_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003054967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM4769267.1"
                     /translation="MGLLDLLGRKRARDKPRNSYEGQDFSYLFGRTTSGENVDEFKAM
                     QTTAVYACVRILAEAVASLPIHVYERTATGKEKKVEHPLYFLLHDEPNPEMSSFVFRE
                     TLMTHLLIWGNAYVQIIRDRSGQVISLYPLLPDKMSVRRDESGKLYYKYKRQSEENPN
                     FREKGDAILKAEDVLHVPGLGFDGLIGYSPIALAKNAIGMTLATENYGASFFKNGANP
                     GGVLEHPGILKDPKRVRDSWNAVYNGVTNAHKVAVLEEGMKYTQVGIPPEEAQFLQTR
                     KFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFL
                     PEEKKTYFVKFNVDGLLRGDYQSRMNGYAIGRQNGWLSTNDIRELEDLNLLSDEEGGN
                     LYLINGNMTKLKDAGGFMKQAPPEQETQSEEDMDA"
     gene            complement(1990..>2219)
                     /locus_tag="U1041_002195"
     CDS             complement(1990..>2219)
                     /locus_tag="U1041_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769268.1"
                     /translation="SSKEIRALLQKGDIIQLEDSLDKIEHDALQGNAQQHRFIGDISQ
                     LAEDTLADYIYLYQESDRTWYLLEEGEMKNI"
BASE COUNT          585 a          524 c          408 g          702 t
ORIGIN      
        1 gggattgttt tctttggttg ttggacttca agtttcgcct gcatttttac aagtaaatct
       61 tgttgggcag catttcgact gaaagaatag ctctcactct ccattccatg ttcctcttgt
      121 ttgtcaaaga gaatcttgtc cgcaaatccg agttcaacag cctttttggc attgaaccaa
      181 gactctgagt ccatgaggtg cgagagtttg gttcttgaaa gccctgttct taattcatag
      241 gcattgatga tggattcctt gatttctccc aacatttcaa tgaccttctg catgtccttg
      301 gcttcacctt gtgccacagt ccaagggttg tggatcatca tcatggcaac aggactcata
      361 gaaaccgttg cacctgccat ggcaatgaca ctagcagcac ttgcggctaa tccatcaatc
      421 actacatgga catcaccttt gtaatccatc aacatgttat agatttgagc agccgcaaaa
      481 acatcacccc ctggactgtt tatccagagg gtgatatttc cactacctgc atgtaaatca
      541 tttttaaata cttgtggtgt gatctcatcg ccaaaccacg tctcatcagc aatctgtcct
      601 tctatacgaa gtgttcgacc actatcatcg tctgtaaaat tccaaaactt atgcatccat
      661 atcctcctca gattgagttt cttgttctgg cggtgcttgt ttcataaagc cacccgcatc
      721 cttcagtttc gtcatgtttc catttatcaa gtagagatta cctccttcct catctgaaag
      781 gaggttcaag tcctcaagtt cacgaatatc atttgtcgat agccagccat tttgtctccc
      841 aatcgcatag ccattcattc gactctgata gtccccacga agtagaccat ccacattaaa
      901 cttcacaaag taagttttct tttcttcagg taaaaaaaga gacctcttga aagcctgttc
      961 gagacgaacc acccaagggt ctaaggtata ttttacaaat tctaaagact gttgttctat
     1021 gtttgaaaaa gaggatttct ctaaatcccc caccatatga ggaggtatgc ggtagagcct
     1081 tgcaatttca ttgatttgga attttcttgt ctgaagaaac tgggcttctt ctggcggaat
     1141 gcctacttga gtgtatttca tcccttcctc aagaactgcc actttatggg cattggttac
     1201 cccattgtag actgcattcc atgaatccct cactcgtttt ggatctttga gaatgcctgg
     1261 gtgttccaaa acaccacctg gatttgcacc atttttgaag aatgaggctc catagttctc
     1321 agtagccaat gtcataccga tagcattttt tgcaagtgca attggagaat aacctatcaa
     1381 gccgtcaaaa cctagaccag gaacatgaag aacatcttct gctttcaaaa tggcatctcc
     1441 cttttcccta aagttaggat tttcttctga ctggcgctta tatttgtaat aaagcttgcc
     1501 actttcgtct cgacgaactg acatcttatc tggtaaaagt gggtaaagac tgataacctg
     1561 tccactccta tctcggataa tctggacata ggcattgccc catattagta gatgagtcat
     1621 caaggtttct ctgaagacaa aggatgacat ctcagggtta ggttcatcat gcaagagaaa
     1681 ataaagggga tgttccacct ttttctcctt tccagttgcc gtcctctcat aaacatgaat
     1741 gggtagtgag gctactgctt cagccaagat acggacacaa gcataaacag ctgttgtctg
     1801 catagcttta aactcatcca cattctcccc actggtcgtt cgtccaaaca ggtaagaaaa
     1861 gtcctgacct tcataactat ttcgtggttt atctctagca cgcttacgtc ccagtaaatc
     1921 tagtagtccc atacttcctc cttttgagta cgaaaaaagc acctcggttg aagtgcttat
     1981 cgtttgttct tagatatttt tcatctctcc ttcttcaaga agataccatg ttctatcact
     2041 ttcttgataa agataaatgt aatctgccaa ggtatcctct gccaattggc tgatgtcacc
     2101 gatgaaacga tgttgctggg cattcccctg taaggcatcg tgttcaattt tatcaagact
     2161 atcttcaagc tgaatgatat cacctttctg aagtaatgca cgaatttctt tgcttgatt
//
LOCUS       DASFQS010000170         2214 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.174, whole genome shotgun sequence.
ACCESSION   DASFQS010000170 DASFQS010000000
VERSION     DASFQS010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.174"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            74..1108
                     /locus_tag="U1041_002196"
     CDS             74..1108
                     /locus_tag="U1041_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall anchor protein"
                     /protein_id="HEM4769269.1"
                     /translation="MKGTTSNADNSITFSNLPVGIYILKETVVPTGGYRPVSELQDIK
                     FEIQANGTLRLITADTNMVSVDASQGNTIELTIKNFKQFTFKLQKTDSGDENHLLDGA
                     RFTIYRDADNNGVEEEVVASGVTTNGVFETPLSFGYYILQETTAPTGYQVNTKKYRFQ
                     INHDGTTFLHNGDDTVTLAERADGNNIVLFTMKNTKQTSYFKLAKRDYRDSTQRLEAT
                     FELKEANKADAIPIVKQTATTGDDVSFENLDLGKTYILKETIAPDGYQLIQKEYRIDV
                     GTDGAITIHDGGDLVSLDGTDTHLIVVKNLRKGEYPQAGGMGAIPYIALGGVMMLVTL
                     AVELRRKNII"
     gene            1147..>2214
                     /locus_tag="U1041_002197"
     CDS             1147..>2214
                     /locus_tag="U1041_002197"
                     /inference="COORDINATES: protein
                     motif:HMM:NF027869.1,HMM:TIGR04226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopeptide-forming domain-containing fimbrial
                     protein"
                     /protein_id="HEM4769270.1"
                     /translation="MKKLTKLFSVFATLLTVLGTLVNLAPVAHAATQETKVIVHKMVM
                     NEGDLEKFKYVENFENYNGGAISKDNYATYFGASAKEVANVRFEVWKKVEVDEDGTKT
                     GTALGIENDSDKYKKQTSELTTENGATFTLDDGTYIFTEDKENSPYYSDQKELTGMKA
                     VPFKLVLPQAKTDGTGYFDKKTPLHVYPKNTENQPTIDKTFGDGKKEQKDVNIGDTIE
                     YKITTKVPKDAAYKTFAWEDTMVAGLDFNTTSLSITLNQVALDQADYTLTATKRGFTA
                     KLTTTGLTKLENAAKAGEVTFTLTYNATLNDSAVVDTEIPNKVKLIYGNRPSEFTEPK
                     STNPSNGEIIVKKTWGEGTTSK"
BASE COUNT          781 a          445 c          459 g          529 t
ORIGIN      
        1 agcgactgga ttgaacgctc gatttgaact ctttacagag gataatcgac ctgtagtcat
       61 tgatggtgtc ggtatgaaag gcactaccag caatgctgat aacagtatta ccttctcgaa
      121 cctgccagtc ggtatttata tcttgaaaga gacagtcgtt ccaaccggtg gttatagacc
      181 agtctcagaa ttacaagata ttaagtttga aattcaagca aatggtacct tgagactgat
      241 taccgcagat accaatatgg tcagcgttga cgcttctcaa ggcaatacca tcgaactcac
      301 cataaaaaac tttaaacaat ttacctttaa actccaaaaa accgacagcg gtgatgaaaa
      361 tcatctactg gatggcgcac ggtttaccat ctatcgagat gcagataata atggtgtgga
      421 ggaagaagtg gtagcgagtg gtgtcaccac aaacggtgtc tttgaaaccc cgctcagctt
      481 tggttactac attttacaag agaccactgc tccgacaggt tatcaagtaa acaccaaaaa
      541 atatcgcttc cagataaacc atgatggcac gaccttcctg cataatggag acgacacggt
      601 gacgctagcg gaaagagcag atgggaacaa tattgtactc ttcaccatga agaataccaa
      661 acaaaccagc tatttcaaac tcgctaaacg tgattacaga gatagcactc aacgcttgga
      721 agccaccttc gagttgaagg aagcaaacaa ggcagacgct atcccgattg tcaagcaaac
      781 ggcgacgaca ggagatgacg tcagctttga gaatttggat ttaggaaaaa cctatatcct
      841 caaagaaacc atagccccag acggctatca actcattcaa aaagaatacc gtatcgatgt
      901 cggaacagac ggagccatca ccatccacga tggaggcgac cttgtcagtc tggacggtac
      961 ggatacacac ctgattgtcg tgaaaaacct ccgcaaagga gaatatccgc aagcaggtgg
     1021 aatgggtgca atcccatata ttgcattagg gggggtgatg atgttagtaa ctttagccgt
     1081 tgagttacgt cgaaaaaaca ttatatagta cctaatgcac ataagatgaa aaataggaga
     1141 acattcatga aaaaactaac gaaattattt tcagtgtttg ccacgctatt gacagttctt
     1201 ggtacactgg taaatcttgc tccagtagct catgcggcta cgcaagaaac aaaagttatc
     1261 gttcataaaa tggtgatgaa cgaaggggat cttgaaaaat tcaaatatgt agaaaatttt
     1321 gagaattaca acgggggtgc gatttctaag gataattacg caacctattt cggtgcatct
     1381 gcgaaagaag tagcgaatgt aagatttgaa gtatggaaaa aagtggaagt agacgaagac
     1441 ggtacaaaga cagggactgc acttggcatt gagaatgatt ctgacaagta taaaaagcag
     1501 actagtgaac tcacaacaga aaatggtgca accttcactc tagatgatgg cacttatatc
     1561 ttcacagagg acaaagaaaa ctcaccatat tacagcgacc aaaaagaatt gactggtatg
     1621 aaagctgtac cgttcaaact agtcttgcca caagcaaaaa cagatggtac aggttacttt
     1681 gataaaaaaa ctcctcttca cgtttatcca aagaatactg aaaatcaacc aactattgac
     1741 aagacatttg gagacggaaa aaaagaacaa aaagatgtaa acatcggcga tacaatcgaa
     1801 tataaaatta ccacaaaagt tcctaaggat gctgcttaca agacattcgc ttgggaagat
     1861 accatggttg caggtcttga cttcaataca acttcgctat caattacttt aaaccaagtt
     1921 gctttagatc aagcagacta tactttgact gcaacaaaac gtggttttac tgctaaacta
     1981 acgactactg gtcttacaaa attagaaaat gctgcgaaag caggtgaagt aacctttacg
     2041 ttaacctaca atgctacctt gaatgactct gcggtagttg atactgaaat ccctaacaag
     2101 gttaaattga tttacggtaa ccgtccaagc gagttcactg agccaaaatc aacaaaccct
     2161 tcaaacggtg aaattattgt taaaaaaaca tggggtgaag gtacaacctc aaaa
//
LOCUS       DASFQS010000171         2152 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.175, whole genome shotgun sequence.
ACCESSION   DASFQS010000171 DASFQS010000000
VERSION     DASFQS010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.175"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            340..774
                     /locus_tag="U1041_002198"
     CDS             340..774
                     /locus_tag="U1041_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018369014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4769271.1"
                     /translation="MDESQRRQIWQFRHEGLGYGTISKILNLSRDSVKKYCGRNPELK
                     GLGSLVKENLDEGRGSYCKTCHQVLVHKPTGRPKKFCSDRCRKAWWETHSDNHDKTKT
                     AYREVTCQNCGRLFLVYASSTRKFCGHSCYIEHRYWSQKKTP"
     gene            1020..>2152
                     /locus_tag="U1041_002199"
     CDS             1020..>2152
                     /locus_tag="U1041_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000211617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA modification methylase"
                     /protein_id="HEM4769272.1"
                     /translation="MTTQPNIEIKELPLTSLKPAGYNPRKKLKKGDKEYEKIRQSLLK
                     FGYVDPIIVNKDLTVIGGHQRLTVLKDLDYETAKCVIVDLSKEDEKALNIALNKITGQ
                     WDDQLLADLLLDLQESDFNLDLTGFEPPEIDDILSNVHDKDLSDDDFDVEEELKKPTF
                     SKRGDIWQLGKHRVICGDSTKAETYDQLLGDKKANLVVTDPPYNVDVEETAGKILNDN
                     MPDSDFYQFLFTMFTQVEKHMEADASIYVFHADTEGLNFRKAFKDAGFYLSGCCIWKK
                     NSLVLGRSPYQWRHEPVLYGWRQKGKHQWFSDRKQTTIWEYNRPKSSKDHPTMKPIPL
                     MAYPIQNSSMRGTLVLDPFLGSGSTLMASDQTGRVCYGIELDE"
BASE COUNT          695 a          408 c          468 g          581 t
ORIGIN      
        1 aggaagacca agacgactga ccgatatgtg gagtatacgt atcgatttta gtcttggagt
       61 ttcgttccaa aagtatctaa tttttaatcc tatgggggag gggggatgaa atctctaaaa
      121 ccttgggaga ctaagaccga cgtcccctca aacgtgcgtt ttcgcaaaat tggggagggg
      181 gtacactaaa aatgaggatt ttagtggctt attccttatg gttatgaggt ttgtagggag
      241 gggctgtttc gttttttagt agaaaaaaat agtcaaaaat gaccgtaaaa aaggttgaaa
      301 atagcctttt taggtctttt ttagtgagga ggagaaccaa tggacgaaag tcagcgacga
      361 cagatttggc aattccgtca tgaggggctg ggatatggca cgatctctaa gatcttgaac
      421 ctttctcgtg attcagtcaa aaagtattgt ggtcgaaacc ctgaactaaa gggattgggt
      481 agccttgtca aagagaactt agatgaggga cgtgggtctt attgcaagac ctgccaccaa
      541 gtcttagttc ataaaccaac tggtcgcccc aagaagttct gttcagacag gtgccgcaag
      601 gcctggtggg aaacccactc agacaaccat gataaaacaa agactgccta tcgtgaagtg
      661 acttgccaga attgtggcag gttattttta gtttatgcca gctcaacacg gaagttttgt
      721 ggacattctt gttatattga acatcggtat tggagtcaaa aaaagactcc ttaaaaatta
      781 aggagtcaaa aattgctgta cgtgtcttta ataaattttt gggagttctt tttatgaacg
      841 aaaaattgtt gtatacctta actaacaaga cacagaggat tttcccaaaa aagtttccaa
      901 aaagatttct cctttaggac gttaaggaac aaccaaatac gataaatcat atctgaccct
      961 ccttatagac attatagcaa ttatagcaga aaaaatcaaa taatttaaag gagtaacgca
     1021 tgacaacaca acccaacatt gaaattaaag aactcccctt gaccagcctc aaacctgcag
     1081 gctataatcc acgtaagaag ctcaagaaag gtgacaagga atacgagaaa atcaggcaat
     1141 ccttactcaa gtttggttac gttgacccca tcatcgtcaa taaagacttg acggtaattg
     1201 gtggccatca acgattgact gtattgaagg acttagacta tgaaactgcc aaatgtgtca
     1261 ttgtcgattt atccaaggaa gatgaaaagg ccttaaacat tgcccttaat aaaatcactg
     1321 gtcaatggga tgaccaactt ttggcggact tgcttttgga tttacaggag tcagatttca
     1381 atctcgacct gactggtttt gaaccaccag aaattgatga catcctatca aatgtccatg
     1441 ataaagacct atcagatgac gactttgatg tagaagagga attgaagaaa ccgacctttt
     1501 caaaacgagg tgacatttgg caacttggta aacatcgagt gatttgtgga gactctacga
     1561 aagctgaaac ctatgaccaa ctgttaggtg ataaaaaggc caatttagtt gtgacagatc
     1621 ctccttataa cgttgatgta gaagaaacag ctggaaagat tctcaatgac aatatgcctg
     1681 atagtgactt ttaccagttt ctctttacca tgttcactca ggtagaaaaa catatggaag
     1741 ctgatgcctc catctatgtt ttccatgcgg atacggaagg actgaacttc cgaaaggcat
     1801 ttaaagatgc aggcttctat ctaagtgggt gttgcatttg gaaaaagaac tcattagttc
     1861 ttggacgtag tccttaccaa tggcgacatg aaccagtttt atacgggtgg cgtcaaaaag
     1921 gcaaacacca atggttcagt gaccgtaaac agacaacaat ctgggaatat aatcgtccaa
     1981 aatctagtaa agaccaccca acgatgaaac caattccgct catggcttat cctattcaaa
     2041 attcatccat gcgaggaacg cttgtcctag atccattcct tggttctggt tcaaccctaa
     2101 tggcctcaga ccaaacaggt cgggtttgtt acggcattga gctagatgag aa
//
LOCUS       DASFQS010000172         2122 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.176, whole genome shotgun sequence.
ACCESSION   DASFQS010000172 DASFQS010000000
VERSION     DASFQS010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.176"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..363)
                     /locus_tag="U1041_002200"
     CDS             complement(<1..363)
                     /locus_tag="U1041_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769273.1"
                     /translation="MALLNIDKVTEPFDLETALVYMRKNGEFIRCKTAEQDFYMYLEE
                     VRRPAIKNGKRQLVTTETVWAFNQWGSTTLTLNLSDLFHDCFYLMRFDENGQPDWSDP
                     TIVEEGSVESEVTDEGTVN"
     gene            complement(369..575)
                     /locus_tag="U1041_002201"
     CDS             complement(369..575)
                     /locus_tag="U1041_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769274.1"
                     /translation="MNLEQINQSLKLTIQELVTKLSDEITAKNLIAIQLVERDEELSL
                     LRKEKQELTELLEVQTKPEEGKGE"
     gene            complement(588..>2122)
                     /locus_tag="U1041_002202"
     CDS             complement(588..>2122)
                     /locus_tag="U1041_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="matrix-binding protein EbhB"
                     /protein_id="HEM4769275.1"
                     /translation="INANSNWIASLARVQFGDSSGIYVGSKVHLYVHISADEITFDPA
                     VTNRFMKLQGPILDSQNAWTWTNWNLYHPFYNKWSSNLTLGNNYRLIKLTSTITQEMY
                     QHSKGFELQVRIDGVKTGKFHVRALMVSTGDMFPDYWTPSLEDFTTVTAFHEVRDTVS
                     SHTRTIGDHTNQISQVVQTANGIVTRVGNLETSRATTATVNAIQTQVSTLAGSWSVRN
                     LTSAGTVLSQLNLNKDGTVKIDGKLVQITGTTYIQDGVIASGKIASLDAGKITSGIIS
                     AARIGAEAITADKLKVDQAFFTKFMATEAFLKQLFAKSAFITQVQSVTLSANKISGGI
                     LSAINGAMKINLSLGNIKFYTNSPSISREVSGYPHQWVSFETGTSNGKPCGVTIIGSN
                     RWNNWNANDGGFVGIRAWNGTDTDQIDVVGDKVRLASAPYTNPDGWEIVTLPNRLSID
                     AYKASDRPSSILNIGDIRIYRNGTTYISLKDVLHQFNHNFKHLVNITGRGDVILTWDT
                     IK"
BASE COUNT          564 a          479 c          406 g          673 t
ORIGIN      
        1 gttaacagtt ccttcatcgg tcacctcact ttctactgaa ccttcctcca caatggtagg
       61 gtctgaccaa tccggttgac cgttctcatc aaaccgcatc agataaaaac aatcatggaa
      121 taaatcagaa agattcaaag ttaatgtggt actgccccac tgattaaaag cccaaactgt
      181 ttctgttgta accagctgcc gctttccatt tttaatggca ggtcgcctta cttcttcaag
      241 atacatgtaa aaatcctgct ctgctgtttt acaacgtatg aactctccat tcttacgcat
      301 gtaaacgaga gctgtttcca aatcaaatgg ttctgttact ttgtcaatat tgagaagtgc
      361 cataataact attccccttt cccttcttca ggttttgtct gaacttctaa cagttctgtc
      421 aattcctgtt tttctttacg caataggcta agttcctcat ccctttccac cagttggatg
      481 gcaatgaggt tcttagcggt gatttcatca gatagcttgg tcacaagctc ttggatagtt
      541 agttttagtg attggttgat ttgttctaga ttcatctgtg aactccttta tttaatcgta
      601 tcccatgtca agatgacgtc acctcgacca gtgatgttta ctaagtgttt aaaattgtga
      661 ttgaattgat gaagaacatc tttcaaactg atataggttg tcccatttcg atagatgcgg
      721 atatcaccga tattcaaaat ggaacttggt cggtcagatg ctttataggc atcaatactc
      781 aaacggttag gcaatgttac aatctcccac ccatctggat tggtatatgg agcactagct
      841 aaacgtactt tatcacctac cacatcaatt tggtcggtat cagtaccgtt ccatgctcga
      901 atccctacaa atccaccgtc attggcattc cagttgttcc atcgatttga accgataatg
      961 gttacaccac acggttttcc gtttgatgtt cctgtctcaa aggaaaccca ttgatgggga
     1021 tatccactaa cctcacgaga gatggacgga gagttggtat agaacttgat gttacccagt
     1081 gacagattga ttttcatggc tccattgatt gctgacaaaa tacctccaga aattttgttg
     1141 gctgataggg ttactgactg cacttgggtt ataaaggctg atttggcaaa caactgcttg
     1201 agaaaggctt ccgtcgccat aaacttggta aagaaagctt ggtcgacctt taacttatcc
     1261 gcagtgatag cttctgctcc aattcgagct gcagagatga tgcctgacgt aatcttgcct
     1321 gcatcaagac tggcaatctt accgctcgct atcacaccat cttggatata ggtcgtgcct
     1381 gtaatttgaa cgagttttcc atcaattttg actgtcccat ccttgttgag attgagctga
     1441 ctcaatactg ttcctgcact ggtcagattt cgaaccgacc acgatcctgc aagtgttgaa
     1501 acctgcgttt gaatggcatt tacggtggct gtggtcgctc gacttgtttc tagatttccg
     1561 actcgtgtca ctatcccatt agccgtttga acaacctgac tgatttgatt agtgtgatct
     1621 ccaattgttc gagtgtgact acttacagta tcccgcactt catgaaaggc tgtcactgtc
     1681 gtaaagtctt ctaacgatgg ggtccaatag tccggaaaca tatcaccagt tgataccatc
     1741 aaggctctca catgaaactt accagtctta accccatcaa ttctgacttg aagttcaaat
     1801 cctttagagt gctgatacat ctcttgagta atggtggagg tcagtttgat taacctataa
     1861 ttgttaccca atgtcagatt gctgctccac ttattgtaga aagggtgata caaattccag
     1921 ttggtccatg tccaagcatt ttgactatcc aaaattggac cttggagttt cataaaacga
     1981 ttcgttacag cagggtcaaa ggtaatctca tccgctgaga tatgaacata taaatgaact
     2041 tttgacccaa cataaattcc actactatcc ccaaattgca ctcttgctaa tgatgctatc
     2101 cagttactat tggcatttat cg
//
LOCUS       DASFQS010000173         2045 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.177, whole genome shotgun sequence.
ACCESSION   DASFQS010000173 DASFQS010000000
VERSION     DASFQS010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.177"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            125..679
                     /locus_tag="U1041_002203"
     CDS             125..679
                     /locus_tag="U1041_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009911037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM4769276.1"
                     /translation="MNITLKKNLKTTIAGLVAGISLLTAGVVSAETYTVKSGDTLSEI
                     AETHNTTVEKLAEQNKITNLDFIHVGQVIELGDVTVKAVESSVEQTQSTSTSTTTATT
                     STYSSNLSAEDAAAKEWIAMKESSGSYDARNGIYIGRYQLTNTYLNGDYSPENQERVA
                     DAYVASRYGSWSAAKAFWLANSWY"
     gene            801..1270
                     /locus_tag="U1041_002204"
                     /pseudo
     CDS             801..1270
                     /locus_tag="U1041_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941829.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
     gene            1406..2014
                     /locus_tag="U1041_002205"
     CDS             1406..2014
                     /locus_tag="U1041_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769277.1"
                     /translation="MENNNQQQEIIEVAENKKTGVWESVKQKVTGMSKKSIILLSVGA
                     LALVTAGFVAAEVYENKLEALGDQIERQVGIADDDDDNQQVTAQANASSASSVNTTSA
                     SQLATSYGVKLVDTSELDGTYTATSGNDTYTLTVKGNQATLTEVDKDGEQDIEQVIFD
                     LDKKLAYIDGEADSYTLNGPTLTLTEIDANDTILDKLTFTKQ"
BASE COUNT          708 a          320 c          441 g          576 t
ORIGIN      
        1 acgctagaaa tagcgttttt attgtctaat ttcaatttga atgtaatatt tgtaacaatt
       61 tcacaaagtc taagtaatag ttagagggta tgatagacac atgacagaaa ggaatgtgac
      121 tattatgaac attacattaa agaaaaactt aaaaacaact attgctggtt tggtagcggg
      181 aatctccctt ttgactgcgg gtgtagtcag tgcagaaacc tatactgtaa agtctggtga
      241 taccctgtct gaaattgctg aaacacacaa tactactgtt gaaaaattag cagagcagaa
      301 taagattacc aacttagatt ttatccatgt cggtcaagtt atcgaattgg gagatgtgac
      361 agtgaaggca gtagagagtt cagttgaaca aactcaatca acatcaactt ctactacaac
      421 agcaacaact agcacctatt cttcaaactt gagtgctgaa gatgcagcag caaaagaatg
      481 gattgcaatg aaggaatcaa gcggtagcta tgatgcacgt aacggtatct acattggtcg
      541 ttaccagttg acaaatactt acttgaatgg tgattactca ccagaaaacc aagagcgtgt
      601 agcagatgct tatgttgcta gtcgctatgg ttcatggtct gcagccaagg ctttctggtt
      661 ggcaaatagt tggtactaag ataaattaga agaggtctag cacgatgcta gacttttttc
      721 tattgttgaa agttgtctag ctttacagat agggttgttt tgtttataat tgtgaaaaaa
      781 ttgactagaa aagaagaact atgaaattac aaaaacgaat ttttcgatta aatatgatca
      841 tgcttatttt tctttggttg cgatgctggg ggtaagtgtt tatgtggtta atagtattta
      901 tcgtaaccaa gaaacatggc agtccactag ccagaagaca gcaagtagtc aacagagttt
      961 ggaaaagttt tcgggatcag attttgcagt attggcagat gagttagcat cgaatgatgc
     1021 acgactctat gtagaaagta atggtgagac tgtcttttca aatctgaaag atgatgcgga
     1081 tgagatactg ggagtgacag tatcatcaac cactcacacc tcctatgtag atggagaaat
     1141 tgtgattagc cgtaaactcg ccacggatgg gcaagtttat tatttatatg ccttgttaga
     1201 agatttggaa gaccagcaag aaagccaaga atttcaagcc ttcctgatac agcttttgtt
     1261 agttggtgga gcaggctatc gtcttaatga ttaatttata agtgtttaga atttgtttag
     1321 aaagtttctc taaagtgtta aaacctatcc tctataatag acttatcagc aagagctgaa
     1381 gaaaacaagt taaaaagagg acaaaatgga aaataacaat caacaacaag aaattattga
     1441 agtggcagaa aataagaaaa caggtgtttg ggaatcagtc aaacagaagg ttacaggcat
     1501 gagtaagaaa tcgattatct tattgtcggt aggtgccttg gcacttgtga cggctggttt
     1561 tgtcgcagca gaagtttatg aaaataaact agaggcatta ggagatcaaa ttgagcgaca
     1621 agttggaatt gcagatgatg atgatgacaa tcaacaggta acagcacaag ctaatgcatc
     1681 atcagcctca tcagtaaata caacttctgc tagtcaacta gcaacaagtt atggtgtaaa
     1741 gttagttgac acctctgagc tagatggtac ttatacagca acatctggaa atgatactta
     1801 cacgttgact gtaaaaggga atcaagcaac cttgacagaa gttgataaag acggagagca
     1861 agatattgaa caagttatct ttgatttaga taaaaaactt gcctacattg atggcgaagc
     1921 agatagttat accttgaatg gtccaactct tactttgaca gaaattgatg ccaatgatac
     1981 aattctagac aaactcactt tcaccaaaca ataagaaaag ggagtgggaa agaactcgac
     2041 cattc
//
LOCUS       DASFQS010000174         1935 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.178, whole genome shotgun sequence.
ACCESSION   DASFQS010000174 DASFQS010000000
VERSION     DASFQS010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.178"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            697..1776
                     /gene="carA"
                     /locus_tag="U1041_002206"
     CDS             697..1776
                     /gene="carA"
                     /locus_tag="U1041_002206"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEM4769278.1"
                     /translation="MSKRRLILEDGTIFEGEAFGADIDVTGELVFSTGMTGYQESITD
                     QSYNGQILTFTYPLVGNYGINRDDYESIKPTCKGVVVSEWARRASNWRNQMTLDEFLK
                     AKKIPAISGIDTRALTKIIRQHGTMKATLANVGDSVEHLTVQLRATVLPTNNIQQVST
                     KTAYPAPGVGRSVVLVDFGLKHSILRELAKRDCNVTVVPYDTTAEEILALHPDGVMLS
                     NGPGNPDDVPEALEMIRGILGKIPIFGICMGHQLFAKANGATTYKMKFGHRGFNHAVR
                     EIATGRVDFTSQNHGYAVAREDLPECLMITHEEINDKSVEGVRHKYYPGFSVQFHPDA
                     APGPHDASYLFDEFMELMDSFKKGQ"
BASE COUNT          547 a          377 c          446 g          565 t
ORIGIN      
        1 aagggacagg tcaatggtta cgagcaactc atttccctac gcctgggatt gggaaagaac
       61 tcgaaaagta aaaaagagtt cgtcaacaag tccttgtttc cagttgttga gctaaaacag
      121 tctatcccca gactgtttca ctcccacacc cgcacagctc aaactgtctg ggagacagtt
      181 tgaggttgga aatagagaga actttgttcg caacagtcgt aatggttaaa tttggagtat
      241 agaatacgaa caaatttacc aatcaaccac tgcgctgaga tgttgacacc tgctcttgga
      301 aatggtgata tactttaagg ccatcccttg cactagtttg tacagtcaat tattatcgaa
      361 ttaactgtac aaacgtggtc agagcaagtc ggactacatg gaaggtatgt gtccttctac
      421 gcaaagtcct attggacctt tgctacctct gacactagcc gtaaggttta actaatatcg
      481 agctaaacct tacggcgtcg gactattatt taattctatc cggagagata gaaaatagaa
      541 aggagaaggt acaggttcga gtaagatttg atttttatat tcgaacatgc cctaaggact
      601 gtgtgaaaaa gataaatatc gacttgacgc ctatagcgtc ggagccgaat ttcctatttt
      661 cactttgtcc ttttaacggg ctttgtatca tagattatgt caaaaagacg tttaattttg
      721 gaagatggca ctatttttga aggggaggcc ttcggtgctg atattgatgt gactggtgag
      781 ttggttttct caactgggat gacaggttat caggaatcca tcacggacca gtcttataat
      841 ggtcagattt taacctttac ctatcccctg gtaggaaatt acgggattaa ccgtgatgat
      901 tacgagtcga tcaaaccgac ttgtaaggga gtggttgtta gcgagtgggc tcgtcgagca
      961 agtaactggc gtaaccagat gactttggat gaatttttaa aggctaagaa aattccagct
     1021 atttctggaa ttgacacacg cgccttgaca aaaattattc gtcagcacgg gaccatgaag
     1081 gcgacattgg caaatgttgg tgattccgtt gagcatttga cggttcagtt gagagcgact
     1141 gttttgccaa ccaacaacat ccagcaagta tcgacaaaaa cagcctatcc tgcacctgga
     1201 gttggacgta gtgttgtgct ggttgatttt ggattgaaac attctattct tagagagtta
     1261 gccaagcgtg attgcaatgt gacagttgtc ccttatgata ctactgctga agaaattctt
     1321 gctctccatc ctgatggtgt tatgctatca aacggtcctg gtaacccaga tgatgttcca
     1381 gaagcgctag aaatgattcg tgggattctt ggcaagattc ctatttttgg tatctgtatg
     1441 gggcaccaac tctttgctaa ggctaatggg gcaaccactt acaagatgaa gtttggtcac
     1501 cgtggtttta accatgcggt gcgtgaaatt gcgacaggtc gagtggattt taccagtcag
     1561 aaccatggtt atgcagtggc tcgtgaagat ttacctgaat gtttaatgat tactcatgaa
     1621 gaaatcaatg acaaatcagt agaaggggta cgccacaagt actatccagg tttctctgtt
     1681 caattccacc cagatgctgc acctggtcca catgatgcca gctatttgtt tgatgaattt
     1741 atggaattga tggattcgtt taaaaaaggg cagtaaggtt tacctaatat cgagctaaac
     1801 cttactgcgt cggtcagagc aagtcggact tcatgctaac gcatgtgtcc tcctacgcaa
     1861 agtcctatgg gacctttgct aactctgaca ctagtttaga atttcaatta ttatcgaatt
     1921 gagattctaa acgtc
//
LOCUS       DASFQS010000175         1927 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.179, whole genome shotgun sequence.
ACCESSION   DASFQS010000175 DASFQS010000000
VERSION     DASFQS010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.179"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..1557)
                     /locus_tag="U1041_002207"
     CDS             complement(<1..1557)
                     /locus_tag="U1041_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769279.1"
                     /translation="MLSLLDITVRTAKWHGKPLPETIKASVKETLNGDFVLNFTYPIT
                     DSGLFRELKEDYLVRSPVPVLGHQLFRIKKIIEGDSTLEVTAYHISDDVMTRIVSPFS
                     CEQVACATALSSLVMASKSPLGDFSFTSDIVKNRTYTTDKEQTLYSTLLDGKHSILGT
                     WEGELVRDNLALSIKSERGQDRGVVISTHYNLKKYQRTKESSQVITRIHATSSFKQEG
                     EDRETVLQVTVDSPLINSYPFINEVTYTNNHVRTRQELIEWASSKFRLEGIDKPKDAI
                     IIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKALAYDYDPLAKNYRSITFDDKASIGT
                     GKTGGSLTTLANNLLEGNKRSEDVAVEIALENANRAFEAEFEKRQVAIDNAIEQAQSR
                     GEVYADRLKTTIDSELSTIHQQMRQQEEEQQRTTRDLLAKAGVNTNLATEAKMKAEQA
                     QTGATEALRRAEQAKLEAIQEANRLTVTERSQTETKIATAKSQAISEASRLVDVAKSL
                     LSGQLATVSTN"
     gene            complement(1557..>1927)
                     /locus_tag="U1041_002208"
     CDS             complement(1557..>1927)
                     /locus_tag="U1041_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769280.1"
                     /translation="KVTFSCHPTKWFKTTTSQVFRTSGTLRSQGSAIAFPKITISGNS
                     TSETSFTIGDDVIRLERLQETLIMDNNPSQPSFKTQRGQPVKWSGDFISIDAARNDSV
                     GVVLGSGITSLTIETNWGWA"
BASE COUNT          494 a          442 c          377 g          614 t
ORIGIN      
        1 attggtactg actgttgcca actgtccact caacagtgat tttgctacat caaccaaacg
       61 actagcttca gagatagctt gtgattttgc tgtcgcaatc tttgtctcag tttgactacg
      121 ctccgttaca gtcaagcggt tagcttcttg aatggcttca agcttggctt gttctgccct
      181 cctgagggct tcagttgccc cagtttgagc ctgttctgcc ttcattttgg cttctgttgc
      241 taagttggta tttacaccag ccttcgccaa taaatcacga gttgtgcgtt gctgctcctc
      301 ttcctgttgt cgcatctgtt ggtgaatagt tgaaagttca ctgtcaatgg tggtctttaa
      361 tcgatccgca tagacctccc cacgactttg agcctgttcg atagcattat caatggctac
      421 ttgacgtttc tcaaattctg cctcaaaggc tctgttagca ttctcaagtg caatttcaac
      481 ggcaacatcc tcactccgct tattcccttc aaggagatta tttgctaggg tagtcaagct
      541 tccgccagtt ttacctgtac cgatacttgc cttatcatca aacgtgatag agcggtaatt
      601 cttagctaga ggatcataat cataagcaag ggctttcttc ctcacatcaa tcccgtgtag
      661 cttgcttttt aaagtcactg tatcgcctag atgaactgtt tgaccatcta attcaaatgc
      721 ctcaatgatg atggcatctt tgggcttatc aataccctct aagcgaaact tgctactagc
      781 ccactctatt aactcttgac gagtcctgac atgattatta gtataggtca cttcattaat
      841 gaatggatag gagtttatca gtggactgtc tactgtgact tgaagtacag tctccctatc
      901 ctccccctct tgtttgaaac ttgaagtggc atggatacga gtgataacct gtgaactttc
      961 tttggttcgt tgatactttt tcaaattgta gtgagtagag ataacaactc cacggtcttg
     1021 tcctcgctca cttttaattg atagggcaag gttatctcga accaattctc cctcccaagt
     1081 tccaaggata gagtgtttac catccagtag tgtggagtaa agcgtctgtt ccttatctgt
     1141 tgtataggtt ctgttcttga caatatcact tgtaaaagaa aaatctccca gtggagactt
     1201 gctcgccatg actagagaag agagagctgt tgcacaggca acttgttcac aagaaaaagg
     1261 agaaacaatt ctagtcatga catcatctga aatatgataa gctgtcactt ctagagttga
     1321 atcaccttca ataattttct tgatccgaaa caactggtgt cccaatactg gaactgggct
     1381 acgaacgagg tagtcctctt ttaactctcg aaatagtccg ctatctgtga tcggataagt
     1441 aaagttcagg acaaaatctc cattcaatgt ttctttgaca cttgccttaa tggtttctgg
     1501 gagtggtttc ccatgccatt ttgccgttcg aacagttatg tctaataatg ataacactaa
     1561 gcccaccccc aattcgtttc tattgttaat gatgtgatgc cagaacctaa gacaactcca
     1621 accgagtcat ttctggccgc atcaatggaa ataaaatcgc cagaccattt tacaggctgt
     1681 cctctttgtg tcttaaaact tggctgacta ggattattat ccattatgag tgtttcttgt
     1741 aatcgctcca agcgtatgac atcatcccca atcgtaaagc tagtttcact agtcgagttg
     1801 ccacttatgg taatcttcgg aaaagcaatg gctgaacctt gacttctcaa agtaccacta
     1861 gtcctaaaca cctgcgaggt cgtcgttttg aaccacttgg ttgggtgaca agaaaatgta
     1921 accttaa
//
LOCUS       DASFQS010000176         1845 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.180, whole genome shotgun sequence.
ACCESSION   DASFQS010000176 DASFQS010000000
VERSION     DASFQS010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.180"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(78..317)
                     /locus_tag="U1041_002209"
     CDS             complement(78..317)
                     /locus_tag="U1041_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000580385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET family sugar transporter"
                     /protein_id="HEM4769281.1"
                     /translation="MVGFIAACLTTFGFVPQVIKVVKTKDTESISLGMYMMSVTGMSL
                     WLFHGIIQGDTALIIANSLSVTLAGIILVYKLVYK"
     gene            complement(399..1832)
                     /locus_tag="U1041_002210"
     CDS             complement(399..1832)
                     /locus_tag="U1041_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002358345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM4769282.1"
                     /translation="MSRLPKNFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVP
                     REITAGVLEGKYYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPKGDELEP
                     NEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVTEYGGFRNRKTIEFFVRFAETC
                     FRRYKDKVKYWMTFNEINNQANYQEDFAPFTNSGIVYQEDENREAVMYQAAHYELVAS
                     ARAVKIGHEINPGFQIGCMIAMCPIYPATCKPSDILMAQKAMQKRYYFADVHVHGFYP
                     EHILRYWERKGISVDFTEEDREDLLEGTVDYIGFSYYMSFAIDSHRENNPHYDYLETE
                     DLVKNTYVKASDWEWQIDPEGLRYALNWFTDMYHLPLFIVENGFGAIDQVEEDGMVHD
                     DYRIDYLGAHIKEFIKAVDEDGVDLMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDE
                     GNGNYARSPKRSFAWYKNVIATNGEEV"
BASE COUNT          575 a          435 c          297 g          538 t
ORIGIN      
        1 cctttcacaa aaaaaagtca agcgttttca atgtttttca ctgttgctaa aaattctttt
       61 atcgatggaa tagtgcatta tttgtaaact aatttataga ccaaaataat acctgctaat
      121 gttacagata ggctattagc aataatgagg gccgtatctc cttgaataat accatggaac
      181 aaccataagg acatccctgt cacagacatc atatacattc ctaacgaaat cgactctgta
      241 tcctttgtct taactacctt gataacctga ggtacaaatc caaaggtagt taagcaagct
      301 gcgataaaac caaccataca attttctcct ttaacatacc aatactaaaa aacataaatg
      361 aagacccctg tagccattac gctacagagg tcttctcatt aaacttcctc accatttgtt
      421 gcgatgacat ttttatacca tgcgaatgag cgtttaggag aacgggcata gtttccattg
      481 ccttcatcat ctttatcaac atagataaag ccatagcgtt tgcgcatttc acctgtccct
      541 gctgacacca gatcgataca accccatgga gtatatccca tcaaatcaac cccatcctca
      601 tcaactgctt tgataaactc cttgatatgt gctccaaggt agtcaatgcg gtaatcatca
      661 tgtaccatgc catcttcttc aacttggtca attgcaccaa aaccgttctc tacgataaaa
      721 agtggcagat gatacatatc tgtaaaccag tttaatgcat agcgcaatcc ttcgggatca
      781 atttgccatt cccaatcaga agccttcaca taggtatttt tcaccaagtc ctctgtctca
      841 agataatcgt aatgaggatt attctcgcgg tgagaatcaa tagcaaaact catatagtat
      901 gagaaaccga tgtaatcaac tgttccttct agcaaatctt cgcgatcttc ctctgtgaaa
      961 tcaacgctaa taccttttct ttcccagtag cgcaagatat gctcggggta gaaaccatgc
     1021 acatgaacat ctgcaaagta ataccgtttt tgcatggcct tttgtgccat caaaatatca
     1081 gatggtttgc aagtcgcagg ataaatcgga cacatagcaa tcatacagcc aatctggaaa
     1141 ccagggttaa tctcatgccc aatcttaacg gcacgtgcag aagccaccaa ttcataatga
     1201 gccgcttgat acataactgc ttcacggttt tcatcctctt gataaacaat acctgagttg
     1261 gtaaaaggtg caaaatcttc ctgataattt gcttggttat taatctcgtt aaatgtcatc
     1321 cagtatttga ccttgtcttt gtaacgacgg aagcaagtct ctgcaaaacg aacaaagaac
     1381 tcaatggttt tacgatttct aaaaccacca tactcggtta ccagatgata aggtaactca
     1441 aagtgtgata gggtgacgac aggttcaatc ccatatttta aacactcatc aaataagtca
     1501 tcataaaact gcaagccagc ttcatttggt tccagttcgt ctccctttgg aaaaatacgt
     1561 gtccatgcaa ttgaagtacg gaaacacttg aagcccatct ctgcaaacaa tgcaatatct
     1621 tctttatagc ggtgatagaa atcaatcgct tcatgattag gataatattt tccttctaat
     1681 acaccagctg taatttctct aggtaccccg tgtcttcctg cagtcatcac atctgctaca
     1741 gaaatccctt ttccaccttc ttgccagcca ccttcaagtt ggtgagcagc tacagcgcca
     1801 ccccataaaa aattcttagg taatctagac ataattgcct cctgt
//
LOCUS       DASFQS010000177         1791 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.181, whole genome shotgun sequence.
ACCESSION   DASFQS010000177 DASFQS010000000
VERSION     DASFQS010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.181"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>1791)
                     /locus_tag="U1041_002211"
     CDS             complement(<1..>1791)
                     /locus_tag="U1041_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrix-binding protein EbhB"
                     /protein_id="HEM4769283.1"
                     /translation="RAFDAEFEKRQVAIDTAIEQAQSHGEVYADRLKASIDSELSTIH
                     QQMRQQEEEQQRTTRDLMAKAGVNTNLATEAKQKAEQAQTGATEALRRAEQAKLDAIQ
                     EANRLSVTERSQTESKIATAKSQAITEASRLVDVAKSLLGGQLATVSTNLSQTKEDIK
                     LLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDFNQAKQRIETAESSITQLGNR
                     ITTEISQTVAKIPTSIGGRNLFKGSRDFSDVWYNAGNGSFFEDYKDVHIHRTKTAWLG
                     KSQRISVKSGEIYTFSFYAKSDSENDGIMFYLSHSGTGTPAQGHPNNKYIAISTDYQR
                     YSITFKITSNGIIVPRLERTNTTSFLFFGGFKLETGSISTDWSPAPEDFSNEIESVKT
                     TITQTASGVEQVSTRLTEANGKISSSETQIRQLVSDVSSKVSQTDFNNLKRTVEGHTT
                     SIQQTQQSILLKADKTVLEGVKTTADNALAKANTNASQITQTKADLRIANDAISQKVA
                     KTDFNSLTGRVASAESTIRTQAGQIEQRLTSTQVESAINSKGYQTKSQVDSNITGRGY
                     LTSSSLQPYATTTSVQNLVRTTSDSFTQRIS"
BASE COUNT          439 a          381 c          366 g          605 t
ORIGIN      
        1 actgattcgc tgggtaaaac tatcagaggt ggttctaacc aaattctgca cactagttgt
       61 cgtcgcatag ggttggagag aactgctggt tagatagcca cgaccagtaa tattggaatc
      121 tacctgtgac ttggtttggt aaccttttga gttaatagct gattcaactt gtgtacttgt
      181 tagtcgttgt tcaatttgcc cagcctgtgt acgtatagtg gattctgcac ttgctactcg
      241 accagtcaag ctattaaaat ctgtctttgc aactttctgt gagatggcat cattggcaat
      301 ccgtaaatca gccttggttt gggtaatctg actagcgttt gtgttggcct tagctaaggc
      361 attgtcagcg gttgttttga ccccctcaag aacagtctta tcagccttaa gcaagatgga
      421 ttgctgtgtt tgttggatgg atgtagtatg tccttcgaca gttcgtttca agttattgaa
      481 atccgtttga ctaaccttcg aggatacatc tgaaactaat tgtcgaatct gtgtttcact
      541 actagaaatc tttccatttg cttcggttaa tcttgtagaa acctgctcta caccagaggc
      601 cgtttgagta atagtggttt tcacactttc aatttcattt gaaaaatctt ctggtgctgg
      661 agaccagtca gttgagatag acccggtctc aagtttaaaa cctccaaaaa acaaaaaact
      721 cgttgtgtta gttctttcca atctcggaac aattattcca ttagaggtta ttttaaaggt
      781 gatagagtag cgctgataat cagttgaaat agcaatatat ttattattag gatgcccctg
      841 cgctggtgtc cctgtaccac tatgggaaag ataaaacata atcccatcat tttcagaatc
      901 gctcttggca taaaaactga atgtgtatat ttccccagat ttcacagaga ttctctgtga
      961 cttacctaac caagctgttt ttgttctatg aatatggaca tctttgtaat cttcaaaaaa
     1021 cgaaccattg ccagcgttat accaaacatc tgaaaaatct cggcttcctt taaaaagatt
     1081 acgaccacct attgaagtcg gtatcttcgc tactgtctga ctgatttcag tcgttatccg
     1141 attccccaat tgcgtaatag atgactcggc agtttcgatt ctctgtttcg cttggttaaa
     1201 atcactggtt ttaacacgct gggaaatttg gtctgcttgt acttgaatca tggattctgc
     1261 accggttact cgaccagtca gactatccac tagttgctta ctcgcaagaa gttttatatc
     1321 ctccttggtt tgtgagagat tagtacttac agttgccaac tgtccaccta acagtgattt
     1381 tgctacatca actaatcgac tagcttcagt gatagcttgt gatttagctg tcgcaatttt
     1441 tgactctgtt tgactacgct ccgttacaga caagcgatta gcttcttgaa tggcatcaag
     1501 tttggcttgt tctgcccttc tgagggcttc agttgcccca gtttgagcct gttctgcctt
     1561 ttgtttggct tctgtggcta ggttggtatt taccccagcc tttgccatta aatcacgagt
     1621 tgtgcgttgc tgctcctctt cttgttgccg catctgttgg tgaatagttg aaagttcact
     1681 gtcaatgcta gcctttaatc gatccgcata gacctcccca tgactttgag cctgttcgat
     1741 agcggtatcg atggctactt gacgtttctc aaattccgca tcaaaggctc t
//
LOCUS       DASFQS010000178         1762 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.182, whole genome shotgun sequence.
ACCESSION   DASFQS010000178 DASFQS010000000
VERSION     DASFQS010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.182"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            32..283
                     /locus_tag="U1041_002212"
                     /pseudo
     CDS             32..283
                     /locus_tag="U1041_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627290.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            376..1170
                     /locus_tag="U1041_002213"
                     /note="aph(3')-IIIa"
     CDS             376..1170
                     /locus_tag="U1041_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase
                     APH(3')-IIIa"
                     /protein_id="HEM4769284.1"
                     /translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLK
                     MTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY
                     EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE
                     EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKW
                     YDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
     gene            1580..1663
                     /locus_tag="U1041_002214"
                     /pseudo
     CDS             1580..1663
                     /locus_tag="U1041_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000527320.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
     gene            1712..>1762
                     /locus_tag="U1041_002215"
     CDS             1712..>1762
                     /locus_tag="U1041_002215"
                     /inference="COORDINATES: protein motif:HMM:NF018061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase attenuation leader
                     peptide"
                     /protein_id="HEM4769285.1"
                     /translation="MLVFKMCNVDKTSTVLK"
BASE COUNT          563 a          270 c          405 g          524 t
ORIGIN      
        1 attgacaata ctgataagat aatatatctt ttatatagaa gatatcgccg tatgtaagga
       61 tttcaggggg caaggcatag gcagcgcgct tatcaatata tctatagaat gggcaaagca
      121 taaaaacttg catggactaa tgcttgaaac ccaggacaat aaccttatag cttgtaaatt
      181 ctatcataat tgtggtttca aaatcggctc cgtcgatact atgttatacg ccaactttga
      241 aaacaacttt gaaaaagctg ttttctggta tttaaggttt tagaatgcaa ggaacagtga
      301 attggagttc gtcttgttat aattagcttc ttggggtatc tttaaatact gtagaaaaga
      361 ggaaggaaat aataaatggc taaaatgaga atatcaccgg aattgaaaaa actgatcgaa
      421 aaataccgct gcgtaaaaga tacggaagga atgtctcctg ctaaggtata taagctggtg
      481 ggagaaaatg aaaacctata tttaaaaatg acggacagcc ggtataaagg gaccacctat
      541 gatgtggaac gggaaaagga catgatgcta tggctggaag gaaagctgcc tgttccaaag
      601 gtcctgcact ttgaacggca tgatggctgg agcaatctgc tcatgagtga ggccgatggc
      661 gtcctttgct cggaagagta tgaagatgaa caaagccctg aaaagattat cgagctgtat
      721 gcggagtgca tcaggctctt tcactccatc gacatatcgg attgtcccta tacgaatagc
      781 ttagacagcc gcttagccga attggattac ttactgaata acgatctggc cgatgtggat
      841 tgcgaaaact gggaagaaga cactccattt aaagatccgc gcgagctgta tgatttttta
      901 aagacggaaa agcccgaaga ggaacttgtc ttttcccacg gcgacctggg agacagcaac
      961 atctttgtga aagatggcaa agtaagtggc tttattgatc ttgggagaag cggcagggcg
     1021 gacaagtggt atgacattgc cttctgcgtc cggtcgatca gggaggatat cggggaagaa
     1081 cagtatgtcg agctattttt tgacttactg gggatcaagc ctgattggga gaaaataaaa
     1141 tattatattt tactggatga attgttttag tacctagatt tagatgtcta aaaagcttta
     1201 actacaagct ttttagacat ctaatctttt ctgaagtaca tccgcaactg tccatactct
     1261 gatgttttat atcttttcta aaagttcgct agataggggt cccgagcgcc tacgaggaat
     1321 ttgtatcgat aagaaataga tttaaaaatt tcgctgttat tttgtacatt taacttgacg
     1381 gtgacatctc tctattgtga gttattagtg gtacagtttt caaccgtttt aattataaaa
     1441 aagtggtgca tttttaaatt ggcacaaaca ggtaacggtt attgcaggtg tatttcttat
     1501 ctatgggttt aacatggatt ttatcattaa aatcatgagt attgtccgag agtgattggt
     1561 cttgcgtatg gttaacccta aagttatgga aataagactt agaagcaaac ttaagagtgt
     1621 gttgatagtg cagtatctta aaattttgta taataggaat tgaagttaaa ttagatgcta
     1681 aaaatttgta attaagaagg agggattcgt catgttggta ttcaaaatgt gtaatgtaga
     1741 taaaacatct actgttttga aa
//
LOCUS       DASFQS010000179         1698 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.184, whole genome shotgun sequence.
ACCESSION   DASFQS010000179 DASFQS010000000
VERSION     DASFQS010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.184"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            37..1113
                     /locus_tag="U1041_002216"
     CDS             37..1113
                     /locus_tag="U1041_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HEM4769286.1"
                     /translation="MNCPPSVRLTEDLPDTTSDFALEGTDAHELCAYLVEKALGRNAR
                     DPTKDLAFYNHEMQDCAEEYRNYVMEQVEKARGYSRDPTVLIEQRLDFSKWVPEGFGT
                     GDCIIVADGLLQVIDYKHGLGVLVDADHNSQMMCYALGALEMFDGLYDFDKVTMTIFQ
                     PRKHNISTFEIEKTELLEWAENELAPKAELAFKGEGEMQSGKHCQFCKLKNICRKRAE
                     DNLALAKMEFANPDTLDNEDIAEILPKLDLLISWANDIKAYALNQATDGHPIPGYKLV
                     EGRSVRKFSDESAVSQAVIEAGYDPYEKKLLTITAMTKLLGKKTFNDLLGGLIIKPSG
                     KPTLVPIDDTRQEMNLAKNEFKED"
     gene            1118..1666
                     /locus_tag="U1041_002217"
     CDS             1118..1666
                     /locus_tag="U1041_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HEM4769287.1"
                     /translation="MTTKVITGPNTRFSYLNANEPKSINGSIPKYSASLIIPKEDTVT
                     INKIKAAIEQAYKEGESKLKGNGKSVPALSTLKTPLRDGDLERPDDEAYKNAYFVNAN
                     SPHKPGVVDGNRQEIIDTSELYSGIYGRASITFYAFNSNGNKGIACGLNNLQKLRDGE
                     PLGGRTRAEDDFATEDDDDFLN"
BASE COUNT          530 a          354 c          369 g          445 t
ORIGIN      
        1 catgccattc tatccgcatc tgcttcacac cgatggttga actgcccacc atctgttcgt
       61 ctcaccgaag atttaccaga cacaacttct gatttcgctc ttgaagggac ggatgcccac
      121 gagttgtgtg cttatctagt cgagaaagct ttaggtagga atgcgcgtga tccgactaag
      181 gatttagcat tttacaatca tgaaatgcag gattgcgctg aagaataccg caactacgtc
      241 atggaacaag tcgagaaagc cagaggctac tctcgtgacc ctacagttct tatcgaacaa
      301 cgactggact tttctaagtg ggtacctgaa ggatttggaa ctggggattg catcatcgtg
      361 gcggatggac ttcttcaggt aattgactac aagcacgggc ttggtgttct agttgatgca
      421 gaccacaact ctcagatgat gtgctacgct ttaggagctc ttgagatgtt tgatggactt
      481 tatgattttg ataaagtcac catgactatc tttcaaccac gaaaacataa catatctacc
      541 tttgagatag aaaagacaga gttgcttgaa tgggctgaaa atgaactcgc tccaaaagct
      601 gaacttgcat tcaaaggtga aggggagatg cagtctggta aacactgcca gttctgtaaa
      661 ctaaagaata tctgtcgaaa gcgtgcggag gataatttgg ctcttgccaa gatggagttt
      721 gcgaatccag atacccttga taacgaggac attgcagaga ttttgcctaa actagatttg
      781 ttgatttcat gggcaaacga catcaaagct tatgcattaa atcaagcaac agatggacat
      841 cctatcccag gatataaact ggttgaaggt cgctctgttc gtaaattctc agatgagtca
      901 gctgttagcc aagctgtgat tgaagctggc tatgaccctt atgagaagaa actactaacc
      961 attacagcca tgactaagtt acttggcaag aaaaccttta atgacctcct tggtggtctc
     1021 ataataaaac caagtggtaa accaacactc gttccaattg acgatacccg tcaagagatg
     1081 aacctagcaa aaaatgaatt taaagaggat taactatatg acaactaaag taattacagg
     1141 accaaacact cgcttcagct acttaaatgc caatgagcca aaatcgatta acggtagtat
     1201 tcccaagtac agtgcctcac tcatcatccc aaaagaggat actgtcacca ttaacaaaat
     1261 caaggctgct attgagcaag catacaaaga aggtgagtca aaactcaagg gcaacggtaa
     1321 atctgtaccc gcattatcta ctctgaaaac accgcttcgt gatggtgacc ttgaacgccc
     1381 tgatgatgaa gcatacaaaa atgcttactt tgtgaatgcc aactctccac acaaacctgg
     1441 ggtggttgac ggcaatcgtc aagaaatcat tgatacatca gaattgtatt caggcatcta
     1501 cggacgtgct tctatcacct tctacgcatt taattccaat ggcaataaag ggattgcttg
     1561 cggtttgaat aacttgcaaa aattgcgtga tggggaaccc ctcggaggac gcactcgtgc
     1621 tgaggatgat tttgcgacag aagatgatga tgactttttg aactaaaaat ggagaattag
     1681 attgatgatg tatactat
//
LOCUS       DASFQS010000180         1646 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.185, whole genome shotgun sequence.
ACCESSION   DASFQS010000180 DASFQS010000000
VERSION     DASFQS010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.185"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(117..905)
                     /locus_tag="U1041_002218"
     CDS             complement(117..905)
                     /locus_tag="U1041_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006595237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4769288.1"
                     /translation="MESVFRFFRRIIYSYKQTSIISDWKAYFLFDLIPPISQTLFFSL
                     IASYIYGVEYIQKWMVGNALLIASFNSLFGVGAQLILEKYNGTLSLLIASKTRLKSIL
                     LSSAIGSMIMTIISVVTGLVVVSMILNISWTSNLIFSFIVVLLVATFVSVSFGYIFSC
                     LILITSETNLVLNLISRILLIFTGANFPISKLPYILQCFSGILPLTRSIKIAKGLIAG
                     KPLSTYYNLIFEELTLSFTFLVLASILLHVLERKSRTTGKLEFV"
     gene            1007..1090
                     /locus_tag="U1041_002219"
     CDS             1007..1090
                     /locus_tag="U1041_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001814874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase attenuation leader
                     peptide"
                     /protein_id="HEM4769289.1"
                     /translation="MLVFKMCNVDKTSTVLKQTKNSDYADK"
     gene            1215..>1646
                     /locus_tag="U1041_002220"
     CDS             1215..>1646
                     /locus_tag="U1041_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEM4769290.1"
                     /translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLT
                     TKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIP
                     YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL"
BASE COUNT          657 a          261 c          226 g          502 t
ORIGIN      
        1 cagaaaagaa aagtaaattt ttaaattttt gatactgttc atagtttata ataactttat
       61 attcttgttc aatcattatc tcctactcca actataattg ctttaataca tgaaaactaa
      121 acgaattcta actttccagt agtgcgtgat tttctttcca aaacatgtaa taaaatagaa
      181 gcaagtacta aaaacgtaaa gcttaatgtt aactcctcaa aaataagatt ataataagtt
      241 gaaagcggct taccagctat caatccttta gcaattttaa tagatcttgt taatggcaaa
      301 attccagaaa agcactgtaa aatatatggt aacttgctga ttggaaaatt tgccccagta
      361 aaaattaaca gtattcgact aattaaattt aatactaaat ttgtctcact tgttattaaa
      421 ataagacatg aaaaaatata tccaaaactc actgatacaa atgtggctac taagaggacg
      481 acaataaacg aaaaaattaa attacttgtc caactaatat ttaaaatcat actaacaaca
      541 actagtccag taacaactga aataatagtc ataatcatgg agccaattgc acttgataat
      601 aaaatggact tcaatcgtgt ttttgaagca attagcaaac taagtgttcc attatatttt
      661 tctaatatta attgtgctcc tacaccaaac aacgaattga acgaagcaat taacaatgcg
      721 ttccctacca tccatttttg gatatactca accccataaa tgtaactcgc aatcaacgaa
      781 aaaaataaag tttgagaaat tggaggtatc agatcaaaca aaaagtaggc tttccaatca
      841 gatatgatcg aagtttgttt ataagagtaa attattcttc taaaaaaacg aaaaacactt
      901 tccatcaata cacctccaga gttgcagaaa tcctaaaatt ttgtataata ggaattgaag
      961 ttaaattaga tgctaaaaat ttgtaattaa gaaggaggga ttcgtcatgt tggtattcaa
     1021 aatgtgtaat gtagataaaa catctactgt tttgaaacag actaaaaaca gtgattacgc
     1081 agataaataa atacgttaga ttaattccta ccagtgacta atcttatgac tttttaaaca
     1141 gataactaaa attacaaaca aatcgtttaa cttctgtatt tgtttataga tgtaatcact
     1201 tcaggagtga taacatgaac aaaaatataa aatattctca aaacttttta acgagtgaaa
     1261 aagtactcaa ccaaataata aaacaattga atttaaaaga aaccgatacc gtttacgaaa
     1321 ttggaacagg taaagggcat ttaacgacga aactggctaa aataagtaaa caggtaacgt
     1381 ctattgaatt agacagtcat ctattcaact tatcgtcaga aaaattaaaa ctgaatactc
     1441 gtgtcacttt aattcaccaa gatattctac agtttcaatt ccctaacaaa cagaggtata
     1501 aaattgttgg gaatattcct taccatttaa gcacacaaat tattaaaaaa gtggtttttg
     1561 aaagccgtgc gtctgacatc tatctgattg ttgaagaagg attctacaag cgtaccttgg
     1621 atattcaccg aacactaggg ttgctc
//
LOCUS       DASFQS010000181         1635 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.186, whole genome shotgun sequence.
ACCESSION   DASFQS010000181 DASFQS010000000
VERSION     DASFQS010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.186"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            128..1147
                     /locus_tag="U1041_002221"
     CDS             128..1147
                     /locus_tag="U1041_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019778501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEM4769291.1"
                     /translation="MKFLDLFAGIGGFRLGMERAGHECVGFCEIDQFARKSYKAIHNT
                     EGEFEFHDITRVTDESVRGIGRVDVICGGFPCQAFSIAGKRAGFEDTRGTLFFEIARF
                     ASILRPKYLFLENVTGLLNHDNGNTFETILGALDELGYDAEWQVFNSKNFGVPQNRER
                     VFIIGHLRGAGGRTIFPFERGDKEIGSLQGQSTNTITTRYGEAQGSGSYIIEGQQPKI
                     IQRGHGYNQGGEHDITPTLTSNSWQENNHVKVYDFYNRKTKDEVGTLTASGHQGNTKA
                     GTFGILDGIRIRKLTPRECWRLQGFPDWAFDRAQAVNSNSQLYKQAGNSVTVNVIEAI
                     AKRLE"
     gene            1152..1496
                     /locus_tag="U1041_002222"
     CDS             1152..1496
                     /locus_tag="U1041_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017865005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769292.1"
                     /translation="MNNIIENVKITKTFLGREDHGILTCYLTVEGYGFGVSIGGYCLD
                     KYDEHKKKRVAFHKSFELIDRILEVAGANSWEELQGKYIRVKSNGFGGRVTKIGNLIK
                     DDWLDFDTFFKE"
BASE COUNT          529 a          286 c          418 g          402 t
ORIGIN      
        1 taagtgatat gaaaagacta ttttgtaaac attcttggaa ggaattaccg cgctttatcg
       61 cgttgaatac tgggaaaatt tctcctaaac gaaaatgcct aaaatgcggg aaagttgagg
      121 atgtatcttg aaatttctag acctgtttgc tggcattggc ggtttccgtc tcggaatgga
      181 acgtgccggt cacgaatgtg tcggtttttg cgagatagac caattcgcca gaaagagtta
      241 caaagcaatc cataatacgg aaggagaatt tgaatttcat gacattacaa gagtcacaga
      301 tgagtctgtt cgaggaatcg gacgtgtgga tgttatctgt ggaggatttc cgtgccaggc
      361 tttcagcatt gctggaaagc gagcaggatt cgaggatact agagggactt tattctttga
      421 gattgctagg ttcgcatcta ttctcagacc taaatatcta ttccttgaaa acgtcacagg
      481 actcctcaac catgacaacg gaaatacatt cgagaccatc ctcggagcat tggatgaact
      541 ggggtatgat gcggaatggc aagtgttcaa cagcaagaat tttggagtgc cccagaaccg
      601 agagcgggtg tttattatcg gacatcttag aggagcaggt ggacgaacga tatttccttt
      661 cgaaagaggc gacaaggaaa ttggtagcct acaaggacaa tcaacaaata ccattaccac
      721 caggtacgga gaagcacaag ggagcgggtc gtacattatt gagggtcaac agccgaaaat
      781 catccaacga ggccacggct acaatcaggg tggcgagcat gatatcaccc cgacattgac
      841 cagcaacagc tggcaggaga ataatcatgt taaggtttat gatttttaca accgaaaaac
      901 caaagacgag gttggcacgc tcactgccag tggccatcag gggaatacca aagcagggac
      961 atttggcata ttagatggta tccgcatccg caaactgaca cctcgcgagt gttggaggtt
     1021 gcaaggtttt ccagattggg cgtttgatag agcccaggca gtaaacagca atagtcaact
     1081 atacaagcaa gctggcaact cagtcacggt taatgtgatt gaggcaatag caaaacgatt
     1141 ggagtaaaca gatgaataac ataattgaaa acgtaaagat aaccaaaact ttcttgggca
     1201 gagaagacca cggaatttta acttgttatc tgactgttga gggatatgga tttggagtat
     1261 ctattggagg atactgccta gataaatacg acgaacacaa gaaaaaacga gtagcttttc
     1321 acaagagctt tgagctgata gaccgtatct tggaggttgc cggtgcaaat agctgggaag
     1381 aactgcaagg gaagtatata cgtgttaaga gtaacggttt tggaggtaga gtaacgaaga
     1441 ttggaaatct tattaaagat gattggttgg actttgatac ctttttcaag gagtaaacag
     1501 atgaataaac aggaagcgat agagattatt gagcaatcaa aaataaaaat agctaacaga
     1561 gagagggtaa tatttaaagc aggcgaaatt ataggaggat gtgtccaggt cgattatgta
     1621 ccacttgaag ttgtt
//
LOCUS       DASFQS010000182         1628 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.187, whole genome shotgun sequence.
ACCESSION   DASFQS010000182 DASFQS010000000
VERSION     DASFQS010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.187"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(88..939)
                     /locus_tag="U1041_002223"
     CDS             complement(88..939)
                     /locus_tag="U1041_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEM4769293.1"
                     /translation="MDLQELCRKVIQARPRNSHKGSYGRVLLIGGLYPYGGAIIMATL
                     ATVNSGAGLVTVATEKDNIPALHSHLPEAMAFSFDDQALLINSLENADLVLIGPGFGE
                     NSKAEQLLDFVFEHLSDQQILVLDGSALTLVAKQNRKNFPCKQVILTPHQKEWERLSA
                     IPIADQTSQRNLEALQSFQENTILVAKSSATQILKTQPNQVTPIGAGGPYQATGGMGD
                     TLAGMIAGFAVQFPHVQLYERILVATYLHSYIADQLAQDYYLVKPTDVSRNIQKTMLQ
                     FQTQTTA"
     gene            1037..>1628
                     /gene="nth"
                     /locus_tag="U1041_002224"
     CDS             1037..>1628
                     /gene="nth"
                     /locus_tag="U1041_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000244460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEM4769294.1"
                     /translation="MVLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQT
                     TDAAVNKATPGLFAAFPTPQAMAAAEVKDIEPYISRLGLYRNKAKFLKDCAQQLMERH
                     NGIVPQTREELESLAGVGRKTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPL
                     ETEKRVMEVLPPELWLPAHQAMIYFGREVCHPKNPEC"
BASE COUNT          434 a          325 c          360 g          509 t
ORIGIN      
        1 acttttgatt tgcattgagt agcattttct accatttgtc aggctttaat cacgagtttg
       61 ttatataaaa gaccgcttaa tcattgatta ggcggttgtt tgtgtttgaa attgaagcat
      121 tgtcttttgg atgtttcttg agacatcagt tggctttaca agataataat cttgagccag
      181 ttggtcagcg atataggagt ggaggtaggt tgctacaagg attctttcat atagttgaac
      241 atggggaaat tgtacagcaa atcctgcaat catacctgca agagtatctc ccatacctcc
      301 tgttgcttgg tagggaccac cagctcctat tggagtgact tggtttggct gggtttttag
      361 gatttgagta gcagaacttt tagctacaag gattgtattt tcttgaaaag attgcaaggc
      421 ttcaagattt ctttggcttg tttggtcagc aatcggaatg gctgataacc gttcccattc
      481 tttctggtgg ggtgtcagga tgacttgttt acacgggaag ttctttctgt tttgctttgc
      541 gactaaggta agtgctgatc cgtcaagaac taaaatctgc tggtcagata aatgttcaaa
      601 aacaaagtcc aataactgtt cagctttgct attttcccca aaacctggac caatcaatac
      661 caagtcagca ttttctaagc tgtttatcag caaggcttga tcgtcaaatg aaaatgccat
      721 ggcttcaggc agatgactat gtaaggctgg tatgttatct ttttcagtag caacagttac
      781 caagcctgct ccactgttga cggttgctag tgtggccatg ataatcgctc caccataggg
      841 atacagtcca ccaatcagca agactcgacc atagcttccc ttatggctgt tgcgtggcct
      901 tgcttgaatg acctttctac agagttcttg taagtccata catattcccc cttttctttt
      961 tattatacca tgaggaatga ggtttatgac aatccagatt ttagataaat ccaagttttc
     1021 atgctataat gaattcatgg tattatcaaa aaaacgtgca agaaaagtta ttgaagaaat
     1081 catcgctcta tatcctgatg ctaagcctag cttggacttt cgaaatcact ttgagttggt
     1141 atgtgcagtg ctcttatctg ctcaaactac agatgctgcg gtgaataagg caacacctgg
     1201 tttgttcgca gctttcccta cgccccaagc catggcggca gcagaagtga aggatattga
     1261 gccttatatt tctcgtttgg gtttgtaccg aaacaaggca aagtttttaa aagactgtgc
     1321 ccagcagttg atggaacggc ataatggcat tgttcctcaa actcgtgagg aattagaatc
     1381 cttggcagga gtgggaagaa aaacggccaa tgttgtttta agtgtcggtt tcggaattcc
     1441 cgccttcgca gttgataccc acgtgggacg gatttgtaaa caccacgata ttgtcaaaaa
     1501 atcggctaca cccctggaaa cagaaaaacg agtcatggaa gtcttacctc ctgaactctg
     1561 gctccctgct catcaagcta tgatttattt tggtcgtgag gtttgccatc ctaagaaccc
     1621 tgaatgcg
//
LOCUS       DASFQS010000183         1628 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.188, whole genome shotgun sequence.
ACCESSION   DASFQS010000183 DASFQS010000000
VERSION     DASFQS010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.188"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..422)
                     /locus_tag="U1041_002225"
     CDS             complement(<1..422)
                     /locus_tag="U1041_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000515884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
                     /protein_id="HEM4769295.1"
                     /translation="MGKHLVICGHGQGRTGYDPGAVNAKLGITEAGKVRELAKLMAKY
                     SGQQIDFITEQNVYDYRSITSIGKGYDSITELHFNAFNGSAKGTEVLIQSSLEADKED
                     MAILSLLSRYFQNRGIKKVDWLYNANQAASRGYTYRLV"
     gene            complement(429..824)
                     /locus_tag="U1041_002226"
     CDS             complement(429..824)
                     /locus_tag="U1041_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEM4769296.1"
                     /translation="MKELLTLNKILFSMIGGLIGSLFGELDGILYALLVFIIIDYLTG
                     IFAAVVEKQLSSSIGFRGIFKKIAILFLVSLGHMIDTAIIKQGGTIRTMVIFFYLSNE
                     GLSILENTVRIGLPIPEKLQAILKQINER"
     gene            complement(802..1170)
                     /locus_tag="U1041_002227"
     CDS             complement(802..1170)
                     /locus_tag="U1041_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769297.1"
                     /translation="MALLNIDKVTEPFDLETALSYMRKNGEFIRCKTAEQDFYMYLEE
                     VRRPAIKNRKRQLVTTETVWAFNQWGSTTLTLNLSDLFHDCFYLMRFDENGQPDWSDP
                     TIVQEGSVESEVTDEGIVNT"
     gene            complement(1176..1382)
                     /locus_tag="U1041_002228"
     CDS             complement(1176..1382)
                     /locus_tag="U1041_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769298.1"
                     /translation="MNLEQINQSLKLTIQELVTKLSDEITAKNLIAIQLVEKDEELSL
                     LRKEKQELTELLEVQTKPEEEKGE"
     gene            complement(1395..>1628)
                     /locus_tag="U1041_002229"
     CDS             complement(1395..>1628)
                     /locus_tag="U1041_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769299.1"
                     /translation="NPDGWEIVTLPNRLSIDAYKASDRPSSILNIGDIRIYRNSTTYV
                     SLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK"
BASE COUNT          461 a          357 c          280 g          530 t
ORIGIN      
        1 tccaccaaac gataggtata tccacgactc gctgcttggt tggcattata gagccaatct
       61 accttcttaa tgccacgatt ttgaaagtat cgtgaaagga gagataggat agccatatct
      121 tccttgtctg cttctaaaga agattgaatc aagacttctg tacctttggc actaccatta
      181 aaggcattga aatgcaattc agtaatcgag tcgtatccct taccaatact agtgatactc
      241 cgataatcat aaacattttg ttcggttata aaatcaatct gttgtccact gtacttagcc
      301 attaacttgg ctaattctcg aacctttcct gcttctgtga tgcctagttt ggcattcact
      361 gctccaggat catagcctgt tcgcccctgt ccatgaccac aaatgactag atgttttccc
      421 atatcttctc acctctcgtt gatttgtttt aaaattgctt gtagtttctc aggtattggt
      481 agaccaattc gaacggtatt ttctaggata cttaacccct cattactgag ataaaagaaa
      541 atgaccatgg ttcgaattgt tccaccctgc ttgataatag ctgtatcaat catatgacct
      601 aatgaaacta aaaataaaat ggctatcttt ttaaagatgc cacgaaaacc gatactactc
      661 gacaactgtt tctctacaac tgccgcaaaa attcctgtta gatagtcaat aataatgaag
      721 accagtagag catataggat gccatccaac tctccaaata gactaccaat caagcctcca
      781 atcatggaaa ataaaatctt attaagtgtt aacaattcct tcatcggtca cctcactttc
      841 tactgaacct tcctgcacaa tggtagggtc tgaccaatcc ggttgaccgt tctcatcaaa
      901 acgcatcaga taaaaacaat catggaacag atcagaaagg ttcagagtta atgtggtact
      961 gccccactga ttaaatgccc aaactgtttc tgttgtaact aactgccgct ttcgattttt
     1021 aatggcaggt cgccttactt cttcaagata catataaaaa tcctgctctg cggtcttaca
     1081 acgtatgaac tctccattct tacgcatgta agatagggct gtctccaaat caaatggttc
     1141 tgttactttg tcaatattga gtagtgccat agcaactatt ctcctttctc ttcttcaggt
     1201 tttgtctgaa cttccaataa ctcagtcaat tcctgttttt ctttacgcaa taggctaagt
     1261 tcctcatcct tttccaccaa ttggatggca atgaggttct tagcggtgat ttcatcagat
     1321 agctttgtga caagctcctg aatagttagt tttagtgatt ggttgatttg ttctagattc
     1381 atctgtgaac tcctttattt aatcgtatcc catgtcaaga tgacgtcacc tcgaccagtg
     1441 atgtttacta agtgtttaaa attgtgattg aattgatgaa gtacgtcctt caagctgaca
     1501 taggttgtac tgtttcgata gatgcggata tctccgatat tcaatattga acttggtcgg
     1561 tcagaagctt tataggcatc aatactcagt cggttaggca acgttactat ttcccagcca
     1621 tctggatt
//
LOCUS       DASFQS010000184         1549 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.190, whole genome shotgun sequence.
ACCESSION   DASFQS010000184 DASFQS010000000
VERSION     DASFQS010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.190"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..180
                     /locus_tag="U1041_002230"
     CDS             <1..180
                     /locus_tag="U1041_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HEM4769300.1"
                     /translation="ETSQQLCEDILRQSIYSEVLKTAILYGVAYLYEHREDANHKELK
                     ETLYHLLLAERKDVF"
     gene            180..518
                     /locus_tag="U1041_002231"
     CDS             180..518
                     /locus_tag="U1041_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000684963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor protein"
                     /protein_id="HEM4769301.1"
                     /translation="MKIAPLRERLSFHVRQIVQDEIGNETSTWIPLFERWCSCRPLTL
                     TERDGSVTKLEQEKVQFTLRYEKAILGLHSLTTHIQFRGQTYEIESIDGDTVPRQLIY
                     IVAIKEESND"
     gene            511..879
                     /locus_tag="U1041_002232"
     CDS             511..879
                     /locus_tag="U1041_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HEM4769302.1"
                     /translation="MTKIGLDALETAIENELAEYVQDTTEVMREVVEEVTEESIESLK
                     ATSPRKSGSYAKGWKSKATIDTSTGLTKTIHNRTPGLTHLLENGHAKSSGGRVEGIKH
                     IAPVEKQAIQSLEEKLRKRV"
     gene            886..1212
                     /locus_tag="U1041_002233"
     CDS             886..1212
                     /locus_tag="U1041_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769303.1"
                     /translation="MLLREMYSILKELQLPLAYHHFEEGSRPRPPYLVYLVTDSENHG
                     ADNWTYHKQNNLQVELYTTKKDLATEQMVESLFDSHHIYFEKVETYISSEKLYQITYY
                     ITLHGG"
     gene            1214..>1549
                     /locus_tag="U1041_002234"
     CDS             1214..>1549
                     /locus_tag="U1041_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769304.1"
                     /translation="MAEKNKVTFGLQDVHWAEVTSEGSDGTLTYGNVERLRGAAELTL
                     EPTGDKGSYKADNINFYTTESNDGYEGTLKVALLTQEFLTRVLGEQLDATTNTISEIA
                     NSEKKNFALM"
BASE COUNT          520 a          283 c          354 g          392 t
ORIGIN      
        1 gaaaccagtc aacaactctg tgaagatatt ttgcgtcaat caatttattc agaagttcta
       61 aagacggcaa tcctatatgg ggttgcctat ctttatgaac atagagaaga tgcaaatcat
      121 aaggagttga aagaaacgct ttatcacttg ttgttggctg aacgaaagga tgtgttctga
      181 tgaagattgc acctttgagg gaacgattgt catttcatgt tcgacagatt gttcaagatg
      241 agattggcaa tgaaacttcg acctggatac ctttatttga acgatggtgt tcttgtcgtc
      301 cactcacctt gaccgaaagg gatgggagtg tgacaaaact ggaacaagag aaagtccagt
      361 tcaccctcag gtatgaaaag gcgattcttg gacttcattc cttaacgact cacattcaat
      421 ttcgaggtca aacctatgag attgagtcga ttgatggaga tacagtgcca aggcaactga
      481 tttacatcgt tgccattaag gaggagagta atgactaaaa ttggactgga tgcactagaa
      541 actgccatcg aaaatgagct ggctgagtat gtgcaggata ccacagaggt gatgcgtgaa
      601 gttgtagagg aagtcactga ggaatctatt gaatccttga aagcaacgtc acctagaaag
      661 agtggatctt atgccaaagg gtggaagagt aaagcaacga ttgataccag tacaggtcta
      721 accaaaacca ttcataatcg aacgccaggc ctgacgcatc tattagaaaa tggtcatgcc
      781 aaaagctctg gtgggcgagt tgaggggata aagcatatcg ctcctgtaga aaaacaagca
      841 atacaatcct tggaagaaaa gctgagaaag cgagtgtgat aagacatgtt actaagagaa
      901 atgtactcca ttctcaaaga actacagctc cccctcgctt accatcattt tgaagaaggg
      961 agtcgtccaa gaccaccata tctggtatat ttggtgactg attcagaaaa tcatggtgcg
     1021 gacaattgga cctatcataa gcagaataac ctgcaagtgg aactctatac cactaagaaa
     1081 gatttagcaa ctgaacaaat ggtggagtca ttatttgaca gccaccatat ttattttgaa
     1141 aaagtagaga cctatatctc atctgagaaa ctctatcaaa taacctatta catcacatta
     1201 catggaggat aatatggctg aaaagaataa ggttaccttt ggtctacaag atgtccattg
     1261 ggcagaagtt acaagcgaag gttctgatgg tacgttgaca tacggcaatg tagaacgact
     1321 tcgtggtgct gcagaattaa ccctagaacc aacaggagac aagggttctt ataaggcaga
     1381 caatatcaat ttttatacaa cggagtcaaa cgatggttat gaaggaacgc taaaagttgc
     1441 tcttctaacg caagaatttt tgactcgagt ccttggagaa cagttggatg cgacgacaaa
     1501 taccatctca gaaatcgcaa acagcgagaa gaaaaatttt gcgttgatg
//
LOCUS       DASFQS010000185         1541 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.191, whole genome shotgun sequence.
ACCESSION   DASFQS010000185 DASFQS010000000
VERSION     DASFQS010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.191"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(101..889)
                     /gene="yghU"
                     /locus_tag="U1041_002235"
     CDS             complement(101..889)
                     /gene="yghU"
                     /locus_tag="U1041_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HEM4769305.1"
                     /translation="MTEYTKPLVWKWEDENDNRSGNRPTAGSRFEHKLPKGDKPLQVY
                     SLGTPNGIKVAIMLEELKELGISEAAYDLYLINIGQGDQFGSDFVDINPNSKIPAMVD
                     YSEKEPVRVFESVNILLYLAEKFEAFLPKAWAERTEVLNWLFWQTGAAPFVGGGFGHF
                     FHYAPTAQEYPINRYTMETKRQLDLLDQLLATREYVAGNTYTIADIAIWSWYGRLVQG
                     ELYPGSAEFLDVDSYKHLKTWVEKIAQRPAVQRGLTVKYHSIDN"
     gene            complement(889..1185)
                     /locus_tag="U1041_002236"
     CDS             complement(889..1185)
                     /locus_tag="U1041_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769306.1"
                     /translation="MKKANREEFYSHLSALYQLSPETISPVLREKLVEFAQKLDHSDN
                     LYLLADQLSVFVNAELTGLTWRAPKELVELGRYIQELQVTYRRYVLGIDDLEEK"
     gene            complement(1195..1482)
                     /locus_tag="U1041_002237"
     CDS             complement(1195..1482)
                     /locus_tag="U1041_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin immunity protein"
                     /protein_id="HEM4769307.1"
                     /translation="MKKANRKEFYSHLSALYQLSPEVISPVLREKLVEFAQKLDHSDN
                     LYMLASQLSAYVNRELLEQAGKAPKELLDLASYIQELQVSHSRYMARLDNL"
BASE COUNT          454 a          339 c          280 g          468 t
ORIGIN      
        1 aatttctatt tttggatttt cacaaagtct aaccctttca ttataaactt ttatcatacc
       61 aaagtaaaag aaaaacccac ccataaggtg ggcaagtcaa ttaattatca attgaatgat
      121 atttcactgt caaccctcgt tgtacagctg ggcgctgagc tattttctct acccaggtct
      181 ttagatgctt gtaagaatca acatctaaaa attctgctga acctggatat agttctcctt
      241 gcaccaagcg accataccaa gaccaaatag caatatctgc gatagtatag gtatttccag
      301 ctacatattc tctagtcgcc aatagttgat ccaagagatc cagctgacgc ttagtttcca
      361 ttgtatagcg attaatcgga tattcttgcg ctgtcggagc gtaatggaag aaatgtccaa
      421 atcctccacc aacaaatgga gcggcgccag tttgccagaa gagccaatta agaacctctg
      481 tccgctctgc ccaagctttt ggtaggaagg cctcaaactt ttctgccaag tagaggagaa
      541 tattgactga ttcaaagacc cgaactggct ccttctccga ataatcaacc atagctggta
      601 tttttgaatt tggattgatg tctacaaaat ctgatccaaa ctgatctccc tgtccgatat
      661 taatcagata taggtcataa gcagcttcgg aaatccctag ttccttcaac tcttctagca
      721 taatagcaac tttaataccg ttaggtgttc ccaaggaata aacttggagg ggcttgtcac
      781 cttttggtaa tttatgttca aagcgactcc ctgctgttgg acgattgcct gaacgattgt
      841 cattttcatc ttcccacttc caaacgagtg gtttcgtgta ttctgtcatt atttttcctc
      901 taaatcatct attcctagta cataacgtcg ataggtcact tgtaattcct ggatatagcg
      961 ccccaattct accaactcct ttggcgctct ccaggtcaag ccggtcaatt cagcattgac
     1021 aaataccgat aactgatcgg ccaacaagta gagattgtct gaatggtcga gtttctgggc
     1081 gaattcaaca agtttctcac gcaaaacggg tgaaatagtt tctggtgaca actgataaag
     1141 ggctgataaa tgggaataaa attcttcacg attggctttt ttcatacgaa actcctataa
     1201 attatctaat cgggccatat accgactatg gctaacctgc agttcctgga tataagaagc
     1261 taaatcaagc aactccttcg gtgcttttcc agcctgctca agtaattccc tattcacata
     1321 tgcagaaagc tgactcgcca acatatagag attgtctgaa tggtcaagtt tctgggcaaa
     1381 ttcaacaagt ttctcacgca aaacgggcga aataacttct ggtgataact gataaagggc
     1441 tgataaatgg gagtaaaatt ctttacgatt agcttttttc ataaaaaaac tcctatatcc
     1501 ttatttttaa tatcagtata tggtattttc acaagtctgt c
//
LOCUS       DASFQS010000186         1528 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.193, whole genome shotgun sequence.
ACCESSION   DASFQS010000186 DASFQS010000000
VERSION     DASFQS010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.193"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..1221
                     /locus_tag="U1041_002238"
     CDS             <1..1221
                     /locus_tag="U1041_002238"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4769308.1"
                     /translation="KVADGTAVSVVTKNGQVPSDEASATYVPAKPASTETPVVEVPAT
                     PSLALDGSGNVLITPPAENATSLDITFTPAGSETPITVTANKDATGNWILPETSIAVV
                     NPDGTISISTSEMEGGTAVSVVAKNEGVPSSQAATLLVQPKQTAEELAPTVKKPIAVE
                     DASKLTDAEKKELEDAVRKDNVLPEGTEVSVADDGTVTVTYPDKSTDTILPTKTVMDA
                     QNGKGTSHSLPAYDLTADEDKDGFTNEEELKQGSNVADAKSVPAGKSSAERLTPTNDL
                     AVKVKDLTKLTDAEKKAVETAIRKNNTLPEGTQIEVANDGSVTITYPDGSVDQIVATK
                     VVATDSTVSPDSGVSQSSGTTKVLPGSASSTRAAKKPLPATGENGSPILVLSGLALLA
                     GVAMFRKAKREDEN"
BASE COUNT          488 a          311 c          336 g          393 t
ORIGIN      
        1 aaggtagcag atggcacagc agtttcagta gttactaaga atggtcaagt tccatctgat
       61 gaagcttctg caacttatgt accagctaaa ccagcaagca ctgagacacc agtagttgaa
      121 gttccagcga ctccatcact agcccttgat ggtagcggaa atgtccttat aactcctcct
      181 gcggaaaatg ctacaagcct tgatattacc ttcacaccag ctggtagcga aaccccaatc
      241 actgtaacag ctaacaagga tgcaactggt aattggattc ttccagaaac ttcaattgct
      301 gttgttaacc cagatggcac aatcagcatt tctacatcag aaatggaagg tggcactgca
      361 gtatcagttg ttgctaagaa cgagggagta ccatctagtc aagcggctac attacttgtt
      421 caaccaaaac aaacagcaga agagttggct ccaacagtga agaaaccaat tgctgttgag
      481 gatgcatcta agttgacaga tgctgagaag aaagaattgg aagatgctgt tcgtaaggac
      541 aatgttcttc cagaaggtac agaagtaagc gtagcagatg atggtacagt tactgttacc
      601 tacccagaca agtcaacaga tacaatcttg ccaactaaga ctgttatgga tgctcaaaat
      661 ggtaaaggca caagccatag cttaccagct tacgacttga cagcagatga ggataaagat
      721 ggctttacaa acgaagaaga attgaagcaa ggttcaaatg tagcagatgc taaatctgta
      781 cctgcaggca agtcttctgc agaacgcctt actccaacaa atgacttggc agttaaggtt
      841 aaagacttga cgaaattgac agatgctgag aagaaagcgg tagaaactgc tatccgtaag
      901 aataacactc ttccagaagg tactcagatt gaggtagcca atgatggttc agtgaccatt
      961 acttacccag atggttccgt ggatcagatt gttgctacga aagtagttgc tacagattct
     1021 acagttagtc cagactctgg cgtaagtcag tcaagtggta ctacaaaagt attgccagga
     1081 tctgcttctt cgacaagagc agctaagaaa ccattgccag caacaggtga aaatggttct
     1141 cctatcttag ttctgtctgg tttagctctg ttagcgggcg tagctatgtt tagaaaagca
     1201 aaaagagaag atgagaacta attctcatct ctccgatgca aattgaaata ctggtgagac
     1261 tcgactgaaa taagaatagg gtaaaatacc ttaaggaaag tatagccgca atttggcaat
     1321 actttccggc tctttgtcaa ccgtagtggg ttgatgtcag ctaacaccta gagaggacga
     1381 aattcgtcct ctctttcttt atggtaaccg cccctttttc aatatacctg ttattgggcg
     1441 cttacttttc aaagtatttt taaaaaaatg catgtagcta gaaaacagtt acatgcattt
     1501 tcttcaggcg tacggcgtga attcaaac
//
LOCUS       DASFQS010000187         1495 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.194, whole genome shotgun sequence.
ACCESSION   DASFQS010000187 DASFQS010000000
VERSION     DASFQS010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.194"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(283..1188)
                     /locus_tag="U1041_002239"
     CDS             complement(283..1188)
                     /locus_tag="U1041_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4769309.1"
                     /translation="MSNLYPFGPTFKQLREKRGLSLKEAASTVVSPQFLSRFEKGEKG
                     ISLENFNRLLIVLGLEWKDFAAAFADNGGDCIEFPAYEFSKHITNEEDIFRYLPEYEK
                     LFDQYLTDNPTQADILLKIIKLGHYPTISKSEETVEKIQPVINHLMKLETYNSAELEI
                     YSRIINHCPLELVEHMSKQLLFMYKQSVDTDTYIRILNGLTFTAKHFSKQGYHLRADN
                     IIKEVKKLQTFERGYLAIPLMFLEVEHIYNQFRWNKTEAIELAKNMLNYLESAKFIDQ
                     NYYSNFIKAFIYNCHKLNKTGEDLF"
BASE COUNT          464 a          251 c          261 g          519 t
ORIGIN      
        1 gtgataaaaa ataacccgtc cccacttttg atcgagttgt tggacgagtt atagtctaat
       61 atatggtcac cgtcttaaac ggttctacat ggggttggtt tgcagaccaa ccccttttct
      121 atctctatta tatcagatta cttataaaat acaaataatc tgttaatttt agtgattagc
      181 ttactttacc tagttatgtc aagctttcgt agtaggttct gccttatttt ttgtattagt
      241 ctgatttcta gtttttgtgc cagactagaa cttactttaa cgttaaaata ggtcttcgcc
      301 tgttttattt aatttatgac agttgtagat aaaggctttg atgaaattcg aataataatt
      361 ttggtcaata aatttagcgc tttccaagta atttaacata tttttagcga gttcgatagc
      421 ttcagtctta ttccagcgga attgattgta gatatgttct acctcaagga acatgagagg
      481 tatagctaaa taaccacgtt caaatgtttg aagctttttc acttctttaa taatgttatc
      541 agcccttaga tgatagcctt gcttggaaaa gtgtttggct gtgaaagtca gtccatttaa
      601 gatacgaata taggtgtccg tatctacact ttgcttgtac ataaacagga gctgtttgga
      661 catgtgttct accaattcga gaggacagtg attgataatt cggctgtaaa tctctagttc
      721 agcactatta taggtctcaa gcttcatcag gtgattgata acaggctgga ttttttcgac
      781 ggtttcttct gacttagaaa ttgttggata atgaccaagc ttgattatct ttaataatat
      841 gtctgcctgt gtaggattgt cagttaggta ttgatcaaat aatttttcgt attcaggaag
      901 atagcgaaat atgtcttctt catttgtgat atgtttggaa aactcgtaag caggaaattc
      961 tatgcaatct ccgccattat ctgcaaatgc agctgcaaag tccttccatt ctaagccgag
     1021 cacaatcaat aaacggttaa agttttcaag ggaaattccc ttctctcctt tttcaaaacg
     1081 actcagaaat tgcggtgata caaccgtaga agcagcctct tttaagctga gccctctttt
     1141 ctctcgtaat tgtttaaagg ttggtccaaa cgggtataga ttcgacataa tattcctttc
     1201 aatctttttt tagattagta tacttaaaac taggataaaa atctacaaaa agatgaccta
     1261 tgggttcaaa aaaaaaaaaa aatacattgc ttttcgatgc tattttgcaa tattgaacct
     1321 atagttttct atggaaataa ttgtaaggaa gtttatggta tactttaaaa atatagagca
     1381 caaatcgctt gatatactac atatatcaag gtttgacttt acagtcaaac caatcctaac
     1441 agcaactcag gagaaaacta tgaacaaaaa aacacttaaa actctagcaa caggt
//
LOCUS       DASFQS010000188         1376 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.196, whole genome shotgun sequence.
ACCESSION   DASFQS010000188 DASFQS010000000
VERSION     DASFQS010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.196"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            1..227
                     /locus_tag="U1041_002240"
                     /pseudo
     CDS             1..227
                     /locus_tag="U1041_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636114.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(715..>1376)
                     /locus_tag="U1041_002241"
     CDS             complement(715..>1376)
                     /locus_tag="U1041_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEM4769310.1"
                     /translation="VLELSKDELLESIRQSTSKRISDKRVAYLAEKLTALANQSYCAV
                     KKTSPILEEVRYYAKELLRLSEQRQTVLDQMVELAQPLPEYDILLSIPGIAETTATSI
                     IGELGDIRRFQSANQINAFIGIDLRHYESGNFLAKEHITKRGNPYARKILFKCIHNIA
                     SASHTNPCHIADFYEKRKRQSQTTSTKPHTIASIHRLIRTMYYLITHNKLYDYRSTQN
                     Q"
BASE COUNT          387 a          239 c          319 g          431 t
ORIGIN      
        1 ctcagtattt tggttttgcc ttgaatttgt cgcaacaaat cgcttatctt tttggtgaag
       61 atgaattatt tgttggtgaa gcgaaggaaa tttcagaaga ggttcaaatc cgcattattg
      121 cctacattgg tgtcatgttt ggagcaggtg gttcagcagt tcttctcaat aaagtatcca
      181 agacagtcgg agctaatatc ggtaaaaaag tagctatgca ggctttgtag gctgggcaaa
      241 aagaccaacc tcgcttcgca gggttcgtgt caacatctca gcgcagtggt tgattgggtt
      301 taacagtcca gtggactgtt aaaggttgga gataagattt gcgaagcaaa gctcagcaat
      361 tcgtgtttta cactccaaat ctgatttcta cgactgatgc gaacagagtt cgcttcattt
      421 ccaaccttca acagtcacta ctctgactgt tgaagctatg cgggggtggg agtaaaatag
      481 tccagtggac tattttagcc cgaacctaca tatttggaag tgaggggaac tcttttttct
      541 accatttgtc aagcctatca aggtatttga tgaaaaatat atcgagttca atagtcaaaa
      601 taaggaaatt gttttctttt ggactaaagt ttcgtgtaaa aaagagtaca cgaaatgaac
      661 accttatgtt gaaaattttt gataaggtgt tacaataata tagcataaac aatcttactg
      721 attttgggta gaacgataat cgtaaagttt gttatgcgtt atgaggtaat acattgtccg
      781 aatgagacga tgtatggagg caatcgtgtg tggcttcgta gaagtcgttt gcgattgtct
      841 ttttcgtttc tcataaaagt cggcgatatg gcaaggattg gtgtgactgg ctgaagcgat
      901 attgtgaata catttgaaca gaatctttct agcgtaggga ttgccacgct tggtaatgtg
      961 ttccttagcg aggaagttgc cagattcata gtgtctcaga tcaataccga taaaggcatt
     1021 gatttgattg gcagactgaa aacggcgaat atctcccagt tcaccaataa tacttgttgc
     1081 agtcgtctca gctattccag gaatagagag cagaatgtca tattcaggta atggctgagc
     1141 tagttccacc atttggtcta ggacagtttg tctctgttca gaaagtctaa gtaattcttt
     1201 tgcatagtaa cgcacctctt ctagtattgg agaggttttc ttgacggcac aataagattg
     1261 attagctagt gctgtaagct tttcggctaa gtacgccaca cgcttgtccg aaatccgttt
     1321 tgaagtggat tgacggatgc tctctaaaag ttcatccttg cttaactcaa gcacga
//
LOCUS       DASFQS010000189         1366 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.197, whole genome shotgun sequence.
ACCESSION   DASFQS010000189 DASFQS010000000
VERSION     DASFQS010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.197"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..227)
                     /locus_tag="U1041_002242"
     CDS             complement(<1..227)
                     /locus_tag="U1041_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001122248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769311.1"
                     /translation="MTININFFNYCQAQSSSTGVHPTEGEVLAPMFVQDYYMTSHHSG
                     LLRGTFRQCRIMGIPILTAFVPVAEEEYEQMV"
     gene            573..>1366
                     /locus_tag="U1041_002243"
     CDS             573..>1366
                     /locus_tag="U1041_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769312.1"
                     /translation="MESKFTFKNKIEKYSLTDTFDPNSGQEILTLYCSHLPKPDYAKY
                     NFDSLTGLVTSNVDSKKNNPFGEFLSINKSTFVDYLNKYGFLFDWESSENFDSIEFNY
                     ILEFQSRLKLLLSIFNNIAKSIEYKELLLSTFLLIGKPQLELNLGKSKFIFPSLFPFH
                     VLRNSIPEKNLSDMTTRHTSSNGKITTYIKVENKFSENGYTCDLDFLFYQDIIENSEY
                     DDFIKDIFYLYVNKPANLEPITAHIIDFIYLFFSKVGICDISNANL"
BASE COUNT          490 a          214 c          201 g          461 t
ORIGIN      
        1 accatctgtt catattcctc ttctgcgact ggaacaaagg cagttaatat tggaataccc
       61 ataatacgac attgacgaaa cgtaccacgt agcaaacctg aatgatgtga agtcatgtag
      121 taatcctgta cgaacatggg agctagtact tcaccttcag ttggatgtac cccagttgat
      181 gaagattgag cttggcagta gttgaaaaag tttatattga ttgtcatgat agattgactt
      241 tccagttaat accgaaagca cacatgacaa atcaaggcat gcaaaaaata ttcttgaccg
      301 catagttact ttcctctatg ttatcggtca gccaatttca caagctgaaa aaagaaatca
      361 ataccaaaac ctctgaaatt atggtcgtcg tcacgactca gtttttgtaa tgatgatcgt
      421 ttagagatat ctcatctcat agctaaattg taatagaaaa caacccataa ttgaagttca
      481 caattaaaac gattattaat acatttcgtt attgtttttt taattatttt aggttacaat
      541 tactttataa taatccagaa agtaatctat aaatggaaag taaatttaca ttcaaaaata
      601 agattgaaaa atattcatta acagacactt ttgatccgaa ctctggtcag gagattctta
      661 cattatattg ctcacattta cctaaacctg attatgcaaa gtataatttt gatagcttaa
      721 caggtcttgt tacaagtaat gtagactcaa aaaaaaataa tccgtttggt gagttcttgt
      781 ccattaacaa aagtaccttt gtagattatt taaataaata tggattttta tttgattggg
      841 aaagtagtga gaattttgat agcattgagt ttaattacat tcttgaattt caaagcagac
      901 ttaaacttct tttatcaatc tttaacaata ttgccaaatc gattgaatac aaagaattat
      961 tattaagtac attcttatta attggtaagc cacaattaga gctaaatctt ggtaaaagta
     1021 aattcatatt cccctctttg tttccatttc atgtgcttcg caattcaata ccagaaaaaa
     1081 acttaagtga tatgacaacc agacatacct cttcaaatgg taaaataaca acgtacataa
     1141 aggtggagaa taaattttcc gaaaacggat acacttgtga tttagatttt ttattttatc
     1201 aagacataat tgaaaattca gaatacgatg attttataaa agatattttt tatctatatg
     1261 taaacaagcc tgcaaatcta gaacctataa ctgcacacat tattgacttc atttatttgt
     1321 tcttcagtaa agttggtatt tgcgatattt caaatgcgaa tttaaa
//
LOCUS       DASFQS010000190         1348 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.198, whole genome shotgun sequence.
ACCESSION   DASFQS010000190 DASFQS010000000
VERSION     DASFQS010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.198"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..439
                     /locus_tag="U1041_002244"
     CDS             <1..439
                     /locus_tag="U1041_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4769313.1"
                     /translation="ILESANGEPVLVAYWFKHDLARIIGRLEKLKVKSRVLKTEEDIR
                     EWNKGNVPVGLLHPAGAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWRQGQEAET
                     VVIQHIVTEGTIDEEILKALENKDAQQERLIEAVKAQVGGTDG"
     gene            432..935
                     /locus_tag="U1041_002245"
     CDS             432..935
                     /locus_tag="U1041_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000361943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769314.1"
                     /translation="MDKVEYIAKNYRDMKMKLQLVQEKLLNYRPISENSVIQSLVFEK
                     SEHEKVKKSKNHGRSELISLSFREKQEQENQEYLSSLLNTYYCLRMDLYYFEFVMDLI
                     PEDLKPLAKDLIYLGKSWTELEEIYEISHSTLAYRRRKILKQLRKCYRWTSKSLELKV
                     EDYHIPI"
     gene            1121..1348
                     /locus_tag="U1041_002246"
     CDS             1121..1348
                     /locus_tag="U1041_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000269808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769315.1"
                     /translation="MWTEGRIDYQGQKVDYIAKVSPQSSEVGIDLGCIFKLDIEVAEE
                     TIVSYDRGWEIYPDTEEREAILEAVLFDLTV"
BASE COUNT          459 a          217 c          304 g          368 t
ORIGIN      
        1 tatccttgaa tccgcaaatg gagagcctgt cttagtggct tattggttca aacatgactt
       61 agctcggatt attggtcgtt tagaaaaact caaggtaaag agtcgggtgt tgaaaacaga
      121 agaagatatt cgtgaatgga acaagggaaa tgtcccagtt ggcttacttc atccagctgg
      181 agctggtcat gggttgaacc ttcaaaaagg cggtcaccac ttggtctggt ttggattaac
      241 gtggtcattg gaattatacc aacaaacaaa tgcacgactt tggcgtcagg gccaggaggc
      301 tgagacagtt gttatccaac acattgtgac tgaaggaacg attgatgagg aaatcctcaa
      361 agcactagaa aacaaagatg cacaacaaga acggctgatt gaagctgtaa aagcacaagt
      421 aggagggaca gatggataag gtggaatata tcgctaagaa ctatcgtgac atgaaaatga
      481 agttacagtt agttcaagag aaattgctca actatcgacc tatctcagag aatagtgtga
      541 ttcagtcact ggtatttgag aagtcagagc atgaaaaggt caagaaaagt aaaaaccacg
      601 gtcgtagtga gctgatttcc cttagtttta gagaaaaaca agaacaagaa aatcaagagt
      661 acctcagtag tttgcttaat acctattact gcttaagaat ggatctttac tactttgagt
      721 tcgttatgga tctaatacct gaggatttga agccattagc caaggattta atttacttag
      781 gcaagagttg gactgaacta gaagagattt atgaaatcag tcattcaaca cttgcttatc
      841 gtaggcgtaa gattctaaaa caattacgca agtgttatcg ttggacttca aaaagtcttg
      901 aacttaaggt ggaagattat cacatcccta tctagtgatg gccgattgca ctaaattggt
      961 actaaattag cactaaattg gtactgtttt agtactgatt ttcaacctag acctgtgata
     1021 tacttaagat gtcaaaaaag ataaaaatcc cccttaaatg actggatatt cttaggctga
     1081 tagggtaata tacacctaga aaaaccaaag gagaaaaacc gtgtggacag aaggacggat
     1141 tgattatcaa ggacaaaaag tggattacat tgctaaggtt agtccccaat cttcagaagt
     1201 tggaattgac cttggatgta ttttcaagtt agatattgaa gtagctgaag aaacaatcgt
     1261 ttcttacgac agaggatggg aaatctatcc agatacagaa gaacgtgaag ccattcttga
     1321 ggcggttttg tttgatttaa ctgtttaa
//
LOCUS       DASFQS010000191         1261 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.199, whole genome shotgun sequence.
ACCESSION   DASFQS010000191 DASFQS010000000
VERSION     DASFQS010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.199"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..929)
                     /locus_tag="U1041_002247"
     CDS             complement(<1..929)
                     /locus_tag="U1041_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769316.1"
                     /translation="MLSLLDKTVRTAKWHGKPLPETIKASVKETLNGDFVLNFTYPIT
                     DSGLFRDLKEDYLVRSPVPVMGHQLFRIKKVIEGDTSLEVVAYHISDDVMTRLVSPFR
                     CEQVPCATALSSMVMASKSPLGDFSFTSDIVKNRTYTTDKEQTLYSVLLDGKHSILGT
                     WEGELVRDNLALTIKGERGQDRGVVISTHYNLKKYQRTKESSQIITRIHATSSFKQEG
                     QDRETELQVTVDSPFINSYPFINEVTYTNNNLRSRQELIEWASSKFRLEGIDKTKDAI
                     IIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKA"
     gene            complement(929..>1261)
                     /locus_tag="U1041_002248"
     CDS             complement(929..>1261)
                     /locus_tag="U1041_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769317.1"
                     /translation="KTTASQVFRTSGTLRSQGSAIAFPKITISGNSTSETSFTIGEDV
                     IRLERLQETLIMDNNLSQPSFKTQRGQPVKWSGDFISIDAGRNDSVGVVLGSGVTSLT
                     IETNWGWA"
BASE COUNT          332 a          287 c          241 g          401 t
ORIGIN      
        1 atggctttct tcctcacatc aatcccgtgt agcttgcttt ttaatgtcac tgtatcgcct
       61 agatgaactg tttgaccgtc taactcaaat gcctcaatga tgatggcatc ttttgtttta
      121 tcaattccct ctaagcgaaa cttactacta gcccactcta ttaactcttg acgagatcta
      181 aggttattat tggtataggt cacttcattg atgaaaggat aagagtttat aaacggacta
      241 tctacagtga cttgaagttc agtttcccta tcctgcccct cttgtttgaa gcttgaagtg
      301 gcatggatac gagtgataat ctgtgaactt tctttggttc gttgatactt tttcaaattg
      361 tagtgagtag agatgactac cccacggtct tgtcctcgct caccctttat agttagggca
      421 agattatcac gaaccagttc cccctcccaa gtaccaagga tagaatgttt accatcaagg
      481 agtacggaat acagagtctg ttccttgtct gttgtatagg ttctgttctt gacaatgtca
      541 ctagtaaaag aaaaatctcc cagtggagac ttgcttgcca tgaccatgct agatagagct
      601 gttgcacagg gtacctgttc acacctaaat ggcgatacca acctagtcat gacgtcatct
      661 gatatatgat aggctacaac ttcaagactg gtgtctcctt caatgacttt ctttatccga
      721 aacaactggt gtcccattac tggaactgga ctacgaacga ggtagtcctc ttttaaatct
      781 cgaaatagtc cgctgtctgt gatcggatag gtaaagttca ggacaaaatc cccatttaag
      841 gtttccttga cacttgcttt tatggtctct gggagtggtt tcccatgcca ttttgccgtt
      901 cgaacagttt tgtctaataa tgatagcact atgcccaccc ccaattcgtt tctattgtta
      961 atgatgtgac gccagaacct aagacaactc caactgagtc atttctgcct gcatcaatgg
     1021 agataaaatc accagaccat tttacaggct gacctctttg tgtcttaaaa cttggctgac
     1081 taagattatt atccataatg agtgtttctt gtaatcgctc caagcggatg acatcttccc
     1141 caatcgtaaa actagtttca ctagtcgagt tgccacttat ggtaatcttt ggaaaagcaa
     1201 tggctgaacc ttgacttctc aaagtaccac tagtcctaaa cacctgcgag gccgtcgttt
     1261 t
//
LOCUS       DASFQS010000192         1221 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.200, whole genome shotgun sequence.
ACCESSION   DASFQS010000192 DASFQS010000000
VERSION     DASFQS010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.200"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            68..1180
                     /gene="glf"
                     /locus_tag="U1041_002249"
     CDS             68..1180
                     /gene="glf"
                     /locus_tag="U1041_002249"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HEM4769318.1"
                     /translation="MKKYDYLVVGAGLFGAVFAHEAAKKGKKIKVIEKRDHIAGNIYT
                     KEVEGIQVHEYGAHIFHTSEKEIWDYVNQFAEFNRYTNTPVANYKGEIYNLPFNMNTF
                     NKLWGVVTPAEAEAKIAEQRAVLGGKTPENLEEQAISLVGTDIYEKLIKSYTEKQWEK
                     PCTELPAFIIRRLPVRLTYDNNYFNDTYQGIPIGGYTQIVEKMLDHENIDVETNVDFF
                     SNKEDYLATYPKIVFTGMIDEFFDYQLGELEYRSLRFETEVLDMENYQGNAVVNYTDS
                     ETPYTRIIEHKHFEFGTQPKTIITREYSKTWKRGDEPYYPVNNDRNNHLYTAYKKLAE
                     QQENVIFGGRLGHYRYYDMHQVIGAALECVRNEVGE"
BASE COUNT          407 a          214 c          267 g          333 t
ORIGIN      
        1 atcatttcgt tagtaaattc catgttttag tttttgaaat tagttaagca ttaaatgtaa
       61 aaacaatatg aaaaaatacg attatctagt tgttggtgca ggtctgttcg gagcggtctt
      121 tgctcatgag gcagctaaaa agggtaaaaa aataaaggtt atcgaaaaac gagaccacat
      181 tgcaggtaac atctatacaa aagaagtaga aggcattcag gtccatgaat atggagctca
      241 tattttccat acttctgaaa aagaaatttg ggactatgtg aatcagtttg cggagttcaa
      301 ccgctataca aacacaccag tcgctaatta caagggtgag atttacaatc ttcccttcaa
      361 catgaatacc tttaacaagc tttggggtgt ggtgactcct gctgaagctg aagcgaagat
      421 tgctgagcaa cgggctgtat tgggaggaaa aacacctgag aacttggaag agcaagctat
      481 ctcactggtc ggtacagaca tctatgaaaa attgatcaag tcctacaccg agaaacaatg
      541 ggaaaagccg tgtacggagt tacctgcctt catcatccgt cgtttgcccg tgcgtttgac
      601 ttatgataat aactacttta acgatactta tcaaggtatt ccaatcggcg gttacacgca
      661 gattgtagaa aaaatgttgg atcatgagaa tatcgatgtg gagacaaatg ttgatttctt
      721 ttccaataag gaagactatt tagcgaccta tccgaagatt gtatttacag gaatgattga
      781 cgagttcttt gattaccaac ttggtgaatt ggaatatcgt agccttcgat ttgagacaga
      841 agtattggat atggaaaact atcaagggaa tgcggttgtc aactatacag atagcgagac
      901 accatatacc cgaatcatcg aacacaaaca tttcgaattc ggtacacaac cgaaaaccat
      961 tattacccgc gagtattcga agacctggaa acgaggcgat gagccatatt atccagtcaa
     1021 caatgatcgc aataatcatc tatacacagc atataagaaa ttggcagaac aacaagagaa
     1081 tgttatattt ggcgggcgtc ttggtcatta tcgttactac gatatgcacc aagtcatcgg
     1141 agctgcctta gagtgtgtga gaaatgaagt tggggaatga ttttgagaag tcatcaaagt
     1201 agtaattgat tcttggcaga a
//
LOCUS       DASFQS010000193         1191 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.201, whole genome shotgun sequence.
ACCESSION   DASFQS010000193 DASFQS010000000
VERSION     DASFQS010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.201"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..429)
                     /locus_tag="U1041_002250"
     CDS             complement(<1..429)
                     /locus_tag="U1041_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase small subunit P27 family"
                     /protein_id="HEM4769319.1"
                     /translation="MAIRGRKPKPTNMKILEGNPGKRPLPTNEVKPKQKAPRCPQWLE
                     DDAKKEWKRMGKILEQMGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGY
                     LQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDVEV"
     gene            complement(480..710)
                     /locus_tag="U1041_002251"
     CDS             complement(480..710)
                     /locus_tag="U1041_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769320.1"
                     /translation="MWEIMTRTVGDRHYVCEFLREDITDPRNIDGAWIRILTIKRDGE
                     YIYQYRYGNEIDNMDDIDRTVCQAVLDNFNEL"
     gene            complement(712..924)
                     /locus_tag="U1041_002252"
     CDS             complement(712..924)
                     /locus_tag="U1041_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4314 domain-containing protein"
                     /protein_id="HEM4769321.1"
                     /translation="MDTKIFNNLKTIYPVGTKVRLVKMDDPHPVPKGTLGTVIGVDDI
                     GSLLVKWENGSCLNVLYGIDIVEKVK"
     gene            complement(926..1174)
                     /locus_tag="U1041_002253"
     CDS             complement(926..1174)
                     /locus_tag="U1041_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769322.1"
                     /translation="MTTTLEKLYEIYPTTASIIPYKEWVIVASKGNKDTVVEIYEIVD
                     SLEEFELFECRLNRIYKESIIVTDLGHAVKWAFDMFGE"
BASE COUNT          308 a          263 c          206 g          414 t
ORIGIN      
        1 aacttccaca tccatagtcg ctaaacggtt acgtgctgat ggtgttaaac caaactgttc
       61 acagaattta agcatgattt ttaagttagt ctggctgata gagacttgag ggacttgttg
      121 gagatagcca ttcggggttt tgataatgga gccatgcttg gaaaggaact cttctgcctc
      181 tttccagcga gcgtaagctt gacagtatcc tgcaaatgca gtcatgtcca tttcggttaa
      241 aattcccatt tgttcgagaa tttttcccat ccgtttccac tccttctttg catcatcttc
      301 aagccactgt gggcaacgtg gggctttttg tttgggtttg acttcatttg taggaagtgg
      361 tcgcttacca ggatttccct caagtatttt catattcgtt ggctttggtt ttcgccccct
      421 gattgccaca atctcacctc ctttagagta agaaaaaaga actcaattcg agttccttcc
      481 taaagttcat taaagttatc aagtacagcc tgacaaactg ttctatcaat atcgtccatg
      541 ttatctattt cattcccata tctatattgg tagatatatt caccatcacg ttttattgtc
      601 agaattctaa tccaagcacc gtctatattt ctcgggtctg ttatatcttc acggagaaat
      661 tcacaaacgt aatgcctatc accaaccgtt cgagtcatta tttcccacat cttactttac
      721 cttttccacg atatctattc catataaaac attcaggcaa ctgccatttt cccacttaac
      781 taagagtgag ccaatgtcat ccactccaat aactgtacca agtgttcctt taggaactgg
      841 atgtggatca tccattttta ctaatctaac ctttgtacca accggataga ttgtctttag
      901 gttattgaaa atttttgtgt ccatgttatt ctccaaacat atcgaatgcc cacttgacag
      961 cgtgaccaag atccgtaaca attattgatt ccttgtatat gcggttaagt cggcattcaa
     1021 ataactcaaa ttcttcaagg ctatcaacga tttcataaat ctcaactact gtatctttgt
     1081 ttcctttgga tgcaacgata acccattcct tgtaaggaat gatgcttgcg gttgttgggt
     1141 agatttcata gagcttttca agtgttgttg tcatggtttt gttctcctct a
//
LOCUS       DASFQS010000194         1190 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.202, whole genome shotgun sequence.
ACCESSION   DASFQS010000194 DASFQS010000000
VERSION     DASFQS010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.202"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            239..>1190
                     /locus_tag="U1041_002254"
     CDS             239..>1190
                     /locus_tag="U1041_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001155321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HEM4769323.1"
                     /translation="MQEHYTPKGKHLTIDNRRLIERWKLENKSNREIAGLLGKAPQTI
                     HNEIKRGTTLQQVRKGVYKKVYSADYAQTVYHSNRKRSVKKLILTKEIREKILHYHKQ
                     KFSPEMMVKKKQVKVGISTIYYWFHNGHLGLTKADMLYPRKWKGVKKQASPNFKPAGK
                     SIEERPEVINLRLENGHYEIDTVLLTRAKNQCLLVLTDRRSRHQIIRLIPNKTAEAVN
                     QALRLLLAEYHILSITADNGSEFCRLAEVFPEEHIYYAHPYSSWERGSNENHNRLIRR
                     WLPKGTKKTTPKEVAFIENWINNYPKKCLDYKSPSEFLLGG"
BASE COUNT          413 a          210 c          248 g          319 t
ORIGIN      
        1 agccacctta ccttagtcaa gaattagatg tttcactctg tttgagtaag ttgatgattt
       61 catttgataa caggcttgaa gctgttaggc taggtggcca aggctaatca gagccttggt
      121 ttagctgaaa aaacagcttc aagggttcct gttgtcaaat gaaatgtgat ttaaggtata
      181 agaaaacacc tctgtgctat acttgttgtt caccacaaac acaaggagag gcacagagat
      241 gcaagaacat tataccccaa aagggaaaca tttgacaata gataaccgtc gcttgattga
      301 gcggtggaaa cttgaaaata agtccaatcg tgaaattgca ggcttgttag gaaaggcgcc
      361 tcaaacgatt cataatgaaa tcaagcgtgg gacaacctta caacaagtgc gaaaaggggt
      421 ctacaaaaaa gtttattctg ctgattatgc gcaaactgtt taccattcca atcgaaaacg
      481 gtcggttaaa aagttaattc taacaaagga aatcagagag aagatcttac actatcataa
      541 gcaaaagttt tctcctgaaa tgatggttaa gaagaagcaa gtgaaagtag ggatttcaac
      601 catttactac tggtttcata atggtcattt aggtttgaca aaagcggata tgctttatcc
      661 tagaaaatgg aaaggtgtca agaagcaagc cagtccgaac tttaagccag ctggtaaatc
      721 aatcgaagag cgaccagagg tcatcaatct tcgattggaa aacggtcatt atgaaattga
      781 tacagttcta ctaaccagag cgaaaaatca gtgtctttta gtcttaaccg accgacgaag
      841 tagacaccaa atcataagat taattccaaa taaaactgct gaagctgtca atcaggcact
      901 taggttacta ttagctgagt atcatatttt atcaataact gcagataatg gttcggaatt
      961 ttgtcgattg gctgaagtat ttcctgagga acatatctac tatgcacatc cctactcttc
     1021 atgggagaga ggttcaaatg aaaatcataa tcgattgatt cggagatggt tacctaaagg
     1081 aaccaagaaa acgactccga aagaagtcgc ttttatagaa aattggatta acaactaccc
     1141 taaaaaatgc ttggactaca agtcgccaag tgaatttctt ttgggtggct
//
LOCUS       DASFQS010000195         1160 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.203, whole genome shotgun sequence.
ACCESSION   DASFQS010000195 DASFQS010000000
VERSION     DASFQS010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.203"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            22..93
                     /gene="shp3"
                     /locus_tag="U1041_002255"
     CDS             22..93
                     /gene="shp3"
                     /locus_tag="U1041_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_128650800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide pheromone SHP3"
                     /protein_id="HEM4769324.1"
                     /translation="MKKMSKFLPILILVMDIIIIVGG"
     gene            complement(255..464)
                     /locus_tag="U1041_002256"
     CDS             complement(255..464)
                     /locus_tag="U1041_002256"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769325.1"
                     /translation="MFKKYKQMKSDAEKYRQLTENRSHEIVLNNYAGDDLVRLEATRS
                     RNFVVIHNYPDGSMHFSIHGLSLIH"
     gene            complement(642..926)
                     /locus_tag="U1041_002257"
     CDS             complement(642..926)
                     /locus_tag="U1041_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002326770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HEM4769326.1"
                     /translation="MPTKRSGPLVGKCPKYGNNIVLKKSFYGCSNYPECTFTLAEHFR
                     KKKLTKTNVKELLEGKETLVKGIKTKDRKSYNAVVKIGEKGYIDFISFSK"
     gene            complement(1072..>1160)
                     /locus_tag="U1041_002258"
     CDS             complement(1072..>1160)
                     /locus_tag="U1041_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(B)"
                     /protein_id="HEM4769327.1"
                     /translation="AKVNNLSTVTYEQVLSIFNSYLLFNGRK"
BASE COUNT          386 a          197 c          179 g          398 t
ORIGIN      
        1 aaactgaaag gaagtccgat tatgaagaaa atgtcaaaat ttttgccgat tttgatttta
       61 gtgatggata ttatcatcat tgtaggtgga taaaatgctt aggtgtacac ctaagtcttt
      121 aaagtaatta aggacttagt agtcagaaga atttcaaaaa tgaactaagc atttaagtta
      181 gtgattacag tatatcttat tatttaaggt atattttatc aaatatttca gaaaggagag
      241 aaaacgatgg aacattaatg aatcaaactc aaaccatgaa ttgaaaaatg catagaacca
      301 tcaggataat tatgaataac aacaaaattt ctagaccttg tagcttcaag acgtaccaaa
      361 tcatctccag cataattgtt caaaactatc tcatgcgacc tgttttcagt taactgacga
      421 tatttttcgg catcggactt catttgctta tatttcttaa acatatagca ccacctttct
      481 aatgactcta ctggaaccac tggagtaact ggagtcaccg gagtcactag aatcattata
      541 acacaattat tttagaatgc aaaaaaaaga acgacttcaa tcgttaatca cttgtgattt
      601 gtgattaata tataaaagcc ctctttaaag ggcttttatg tttattttga aaaagagata
      661 aaatcaatat atcccttttc cccaattttt acaacggcat tgtaggactt tctatctttc
      721 gttttgattc cttttaccag ggtttctttt ccctctagta attcttttac atttgttttg
      781 gtgagttttt tctttctaaa atgttcagct aaagtgaagg tacattcagg ataatttgaa
      841 caaccataaa acgatttttt taatacaata ttgttgccat acttaggaca ttttcctaca
      901 aggggtcccg agcgcttagt gggaatttgt accccttatc gatacaaatt ccccgtaggc
      961 gctagggacc tctttagctc cttggaagct gtcagtagta tacctaataa tttatctaca
     1021 ttccctttag taacgtgtaa ctttccaaat ttacaaaagc gactcataga attatttcct
     1081 cccgttaaat aatagataac tattaaaaat agacaatact tgctcataag taacggtact
     1141 taaattgttt actttggcgt
//
LOCUS       DASFQS010000196         1132 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.204, whole genome shotgun sequence.
ACCESSION   DASFQS010000196 DASFQS010000000
VERSION     DASFQS010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.204"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>1132
                     /locus_tag="U1041_002259"
     CDS             <1..>1132
                     /locus_tag="U1041_002259"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4769328.1"
                     /translation="KAIDAATKADEVDAATLAGTAAIAADVLDAAKQDAKNKIAEDVK
                     AAKEAIDNNPNLSEKEIADAKAEVAKAAEEAKKAIDAATTPEAAQAAEEAGTKAIAED
                     VVDAAKLDAKNKIAKDLATVEAAIDANSNLSQDEKDAAKLAAQAKAAEAVADIEKATT
                     PEAAQTLEDAAVKDLANIEIKAAYDDAVKAIEAADNLSTAAKTQALEDLKKARQAAEE
                     AIKTASTADEVAKGALDGLKSIAKVEAKAAADDAKAAIEQNANLTDAEKKVYTDAIDE
                     ALKDTEANITAATDADTVDAETVLAQKDIAKQEVAAATADAVKGIEANTNLTDAEKDE
                     YKATVTKAAETAEKAIADATTAADIQSKTFDATQDVAKEEVKA"
BASE COUNT          441 a          233 c          265 g          193 t
ORIGIN      
        1 aaaaagccat cgacgcagca accaaagctg atgaagtaga tgcagcaact cttgcaggta
       61 cggcagctat cgccgcagat gttcttgacg cagctaagca agatgctaag aacaagattg
      121 ctgaagatgt aaaagcagca aaagaagcga ttgacaacaa tccaaacttg tcagaaaaag
      181 aaattgcaga cgctaaggca gaagtagcta aagcagcaga agaagctaag aaagctatcg
      241 atgcagcaac aacaccagaa gccgctcaag cagcagaaga agctggtacg aaagctatcg
      301 cagaagatgt tgttgacgca gctaaactag acgctaagaa caagatagct aaagacttgg
      361 caactgtaga agcagcaatc gatgctaact caaacttgtc acaagacgaa aaagatgcag
      421 cgaaacttgc agctcaggct aaggcagcgg aagcagttgc ggacatcgaa aaagcaacga
      481 ctccagaagc agctcaaacc ttagaagatg cagctgtaaa agaccttgca aatatcgaga
      541 ttaaagcggc ttacgatgac gcagtgaaag caatcgaagc agcggacaac ttgtcaacag
      601 cagctaaaac acaagcctta gaagacttga agaaagctcg ccaagcagca gaagaagcta
      661 ttaagacagc atcaacagct gatgaagttg ccaaaggtgc acttgatggc ttgaaatcta
      721 ttgctaaagt tgaagcaaaa gcagcagctg acgatgcaaa agcagctatt gaacaaaatg
      781 caaacctgac agatgctgag aagaaagtct acacagatgc aatcgatgaa gcgttgaaag
      841 atacagaggc aaacattact gctgcaacgg atgcagatac tgttgacgct gaaacagttc
      901 ttgctcaaaa agacatcgct aagcaagaag tagccgcagc tacagctgat gctgtgaaag
      961 gtattgaagc aaataccaac ttgacagatg ctgaaaaaga tgaatacaaa gcaactgtta
     1021 ccaaagcagc tgaaacagct gaaaaagcta ttgcagatgc aacaacagca gctgacattc
     1081 aaagcaagac cttcgatgct actcaagatg ttgctaaaga agaagtaaaa gc
//
LOCUS       DASFQS010000197         1099 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.205, whole genome shotgun sequence.
ACCESSION   DASFQS010000197 DASFQS010000000
VERSION     DASFQS010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.205"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>1099
                     /locus_tag="U1041_002260"
     CDS             <1..>1099
                     /locus_tag="U1041_002260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769329.1"
                     /translation="TSESASMSASTSASTSASASASTSASTSASTSASASASTSASTS
                     ASTSASESASTSASTSASTSASVSASTSASTSASTSASESASTSASTSASTSASASAS
                     TSASTSASTSASASASTSASTSASTSASESASTSASTSASTSASASASTSASTSASTS
                     ASASASTSASTSASTSASESASTSASTSASTSTSESASTSASTSASTSASESASTSAS
                     TSASTSASASASTSASTSASTSASESASTSASTSASTSASESASTSASTSASTSVSAS
                     ASTSASTSASTSASMSASTSASTSASTSASTSASTSASTSASESASTSASTSASTSTS
                     ASASTSASTSASTSASESASVSASTSASTSAS"
BASE COUNT          252 a          367 c          265 g          215 t
ORIGIN      
        1 caacgagtga gtccgcgtca atgagtgcgt ctacctcagc aagcacgagt gccagcgcgt
       61 ccgcatcaac cagtgcgtct acctcagcaa gtacaagtgc tagcgcgtcc gcgtcgacca
      121 gtgcgtctac ctcagcaagc acgagtgcca gtgagtccgc gtcgaccagt gcgtctactt
      181 cagcaagcac gagtgccagc gtgtccgcgt cgaccagtgc gtctacctca gcaagcacat
      241 cagcttctga gtctgcatca accagtgcgt ctacttcagc aagtaccagt gctagcgcgt
      301 ccgcctcaac aagtgcgtct acctcagcaa gcaccagtgc tagcgcgtcc gcgtcgacca
      361 gcgcgtctac ctcagcaagt accagtgcta gcgagtccgc gtcgaccagt gcatctacct
      421 cagcaagcac aagtgctagc gcgtctgcct caacaagtgc gtctacttca gcaagcacga
      481 gtgccagcgc gtccgcatca accagtgcgt ctacttcagc aagtacctcg gcttctgagt
      541 ctgcatcaac aagcgcatct acttcggcaa gtacctcaac gagtgagtct gcgtcgacca
      601 gtgcgtctac ttcagcaagc accagtgcca gtgagtctgc gtcaaccagc gcgtctactt
      661 cagcaagcac cagtgccagt gcgtctgcgt cgaccagtgc gtctacttca gcaagcacat
      721 cagcttccga gtctgcatca acaagtgcgt ctacctcagc aagtacaagt gccagcgagt
      781 ccgcgtcaac cagcgcgtct acttcagcaa gcaccagtgt cagcgcgtcc gcatcaacaa
      841 gtgcgtctac ctcagcaagt acctcagcgt caatgagtgc aagtacctca gcatcgacta
      901 gcgcaagcac gtccgcgtca accagtgcat ccacttcagc aagcacgtca gcctcagagt
      961 ctgcatcaac gagtgcgtct acctcagcaa gtacctcaac gagtgcgtct gcatcgacca
     1021 gtgcgtctac ttcagcaagt acctcggctt ctgagtctgc atcagtcagc gcgtctactt
     1081 cagcaagtac ctcggcctc
//
LOCUS       DASFQS010000198         1091 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.206, whole genome shotgun sequence.
ACCESSION   DASFQS010000198 DASFQS010000000
VERSION     DASFQS010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.206"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>1091
                     /locus_tag="U1041_002261"
     CDS             <1..>1091
                     /locus_tag="U1041_002261"
                     /inference="COORDINATES: protein motif:HMM:TIGR01443.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006740451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769330.1"
                     /translation="YQFLFDMFTQVEKHMESDGSIYVFHADTEGLNFRKAFKEAGFYL
                     SGCCIWKKNSLVLGRSPYQWQHEPCQPAGTIVQTINGPVPIEDLKDGDRVISYNSYSG
                     TILGMRNGGYEIKTASRYYNGTLYGIKIGNKITWATDNHQFSVRFNESTKNNYCTYLM
                     RKGDRWRVGITELYNSRGFGLKTRLRGEKGEEAWVIDVFDDKVTAQCHEQLLALKYGI
                     PYTHWEMDRGLPKKETQRTSHHVDMIYDNLDSQIQLDNARRLLVDYGRNIKYPLIHKG
                     NGHEAFSKRVTARINACNLIPQIMQVPIPKTYEKETRENFYWGVIDEVLTKGFSGPVY
                     SLAVEKYEHYIADGIVTHNCLYGWKQKGK"
BASE COUNT          357 a          182 c          237 g          315 t
ORIGIN      
        1 ttaccagttt ctttttgata tgttcactca agtagaaaaa catatggagt ctgatggttc
       61 aatctatgta ttccatgcgg atacagaagg actgaacttc cgaaaggcat ttaaagaggc
      121 gggattctac ctcagtgggt gttgcatttg gaagaagaac tccttagttc ttggacgtag
      181 tccctatcag tggcaacatg aaccatgtca gccagcaggt acgattgttc aaactataaa
      241 tggtcccgtt ccaatagaag acttaaagga tggtgatagg gtcattagtt acaattccta
      301 ttcaggaaca attctgggga tgcgtaatgg tggctatgag ataaaaacag cttctcgata
      361 ttataatggc accttatacg gtataaaaat tggaaataaa ataacgtggg ctacggataa
      421 ccatcagttt tcggttcgtt ttaatgaatc aacaaaaaac aattattgta cctatcttat
      481 gcgtaaagga gaccgttggc gtgtagggat tactgaactc tataactcga ggggatttgg
      541 tttgaaaacg agacttcgtg gagagaaagg tgaagaggct tgggtcattg atgtatttga
      601 tgataaagta acagcccagt gccacgaaca gttattagcc ctcaagtacg gtattcctta
      661 tactcattgg gaaatggata gaggacttcc aaagaaagaa actcaacgca catctcatca
      721 tgtcgatatg atttatgata acttggatag ccaaattcaa ttagataatg ctagacgttt
      781 gcttgttgac tatggtcgaa atatcaaata cccactcatt cacaaaggaa atggacatga
      841 ggcatttagt aaacgagtaa ctgctcgcat caatgcttgt aatctgatcc ctcaaattat
      901 gcaagttcca attccaaaaa cttatgaaaa ggaaacgaga gaaaattttt actggggcgt
      961 aattgatgag gttcttacaa aaggattcag tggacctgtt tattctcttg ctgttgaaaa
     1021 atatgaacat tatattgcag atggaattgt tactcataac tgtctttatg gctggaaaca
     1081 aaagggaaaa c
//
LOCUS       DASFQS010000199         1066 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.207, whole genome shotgun sequence.
ACCESSION   DASFQS010000199 DASFQS010000000
VERSION     DASFQS010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.207"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>1066
                     /locus_tag="U1041_002262"
     CDS             <1..>1066
                     /locus_tag="U1041_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769331.1"
                     /translation="GVNTDSLDKKAVKELLKTVDDKTAIVLKLRQQAAKSSVSKYQAM
                     MNCVCKDGRARGMFQFYGANRTGRWAGRLVQLQNLPQNHLPDLEEARELFRTGDLEAT
                     ELLYDTQDTLSQLIRTAFVPSKGKKFIVCDFSAIEARVLSHLAGERWRSKVFDLGKDI
                     YCMSASQMFGVPVEKHGQNSKLRQKGKIAELACGYGGSVGALKAMGALDMGLSEDELQ
                     PLVNSWRQANPNIVLLWWDVDNAVKTAVKEQIPTSTHGIQFDVRSGILFITLPSGRKL
                     SYIKPRIDENQFGGESVTYEGTGTAKRWERLESYGPKFVENIVQAISRDILAYSLEQL
                     KEFKVVGHVHDEVIIECPMEQ"
BASE COUNT          335 a          216 c          243 g          272 t
ORIGIN      
        1 cggagtaaat actgattcgc tagacaaaaa agctgtgaaa gaactcctca aaacagtcga
       61 tgataaaacg gcaatagtcc tcaaacttcg gcagcaagct gccaaatcaa gtgtttccaa
      121 atatcaagcc atgatgaact gtgtttgtaa ggacggtcga gcaagaggaa tgtttcaatt
      181 ctatggggca aaccgaactg gtcgatgggc tggtcgcttg gtgcaacttc agaacttacc
      241 acagaaccac cttcctgacc tagaggaagc tagagaactt ttcagaactg gtgacttaga
      301 agctactgag ctactctacg acacacaaga taccttatct caacttatcc gaacagcctt
      361 tgtccctagc aaaggaaaga aattcattgt ttgcgacttt tcagcaatcg aagctcgtgt
      421 cctgtcccac ttggcagggg agagatggcg tagtaaggta tttgatctag gaaaagacat
      481 ctactgtatg tccgcttctc agatgtttgg agtaccagtt gaaaaacatg gacaaaattc
      541 taaattgaga caaaaaggga aaattgcgga gcttgcttgc ggatatggtg gttcagtcgg
      601 tgcactcaaa gccatgggtg cacttgatat gggactatca gaggacgaac tccaaccact
      661 tgttaactca tggcgacaag caaatcccaa tatcgttctc ttatggtggg atgtcgataa
      721 tgctgtaaag actgctgtaa aggaacaaat tccaacatct actcacggta ttcaatttga
      781 tgtaagaagc ggcattctat tcattacact cccatctggt cgtaaattat catatattaa
      841 accaagaatt gacgagaacc aattcggtgg agagtctgtc acttatgaag gaactggaac
      901 tgccaaacgt tgggagaggc tcgaaagtta cggccccaaa tttgtggaga acattgtcca
      961 ggctatcagt cgtgatattc ttgcttactc tttggagcaa ctgaaagagt ttaaagttgt
     1021 aggacatgta catgatgaag taataatcga atgcccaatg gaacaa
//
LOCUS       DASFQS010000200         1057 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.208, whole genome shotgun sequence.
ACCESSION   DASFQS010000200 DASFQS010000000
VERSION     DASFQS010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.208"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(2..>1057)
                     /locus_tag="U1041_002263"
     CDS             complement(2..>1057)
                     /locus_tag="U1041_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEM4769332.1"
                     /translation="NQEIARLERQEKIDLELSQPASQALIGQPTTVLNDKTTEEEKKG
                     VASDSYAKTFWTSVRKRHFFDVKDVLRVGEDTEGGHLVPDEYEKKLVQGLQEENFFRS
                     LATVIKTSSGERKIPVVTGHGSASWMDENGLYPETEETFGQVTLDSHKIGTAIRISEE
                     LLNDSVFDLESYMTAEFARRIGTEEEKAFLIGDGSKKPTGIFTQAEVTGPTTATKDIT
                     FDDMIELYHSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNR
                     PYYTSTFAPLPEAGNKAIAFGDFSYYWIADRQGRTFKRLNELYANNGQIGFLASQRVD
                     GKLVLPEAVKTLTVKAK"
BASE COUNT          298 a          236 c          207 g          316 t
ORIGIN      
        1 attacttagc cttcacagtt agtgtcttaa cggcttcagg taggactaac ttaccatcca
       61 cacgttgtga agcaagaaaa ccaatctgtc cattattggc atagagttca ttcagacgtt
      121 tgaaggtacg tccctgacga tccgcaatcc aataataaga gaaatcacca aacgcaatgg
      181 ctttatttcc tgcttcaggt agtggagcaa atgtcgatgt gtagtatgga cgatttaaaa
      241 tcagatctgg ttgtccagct tgagtggatg gctgccaaat gtaattacca ttgttgtcct
      301 tgagtttacg gatagctttg acagtcgtat catgtaaaat ccaaacagca ttcttacgat
      361 agggtgctgg tagagaatga tacagttcaa tcatatcgtc aaaggtaata tcctttgtag
      421 cagtcgttgg acctgtaact tctgcctgag taaagatacc agttggtttc ttagaaccat
      481 caccaatcaa gaatgctttt tcttcttccg ttccaatgcg acgagcaaat tcagctgtca
      541 tataggattc aaggtcaaag actgaatcgt taagcaactc ttctgaaata cgaatggcag
      601 tcccaatctt atgagagtct agtgtcacct gaccaaaggt ttcttctgtt tcaggataaa
      661 gaccattttc atccatccat gatgctgaac cgtgtccagt cacaacagga atcttacgct
      721 caccactaga ggttttaatg acagtcgcaa ggctacggaa gaaattctct tcttgtaatc
      781 cttgaaccag tttcttctca tactcatcag gaacaagatg accaccttcg gtatcctccc
      841 caactcgaag gacatccttg acatcaaaaa agtgacgctt acggacactt gtccaaaatg
      901 tcttggcata gctatctgaa gccactcctt tcttttcctc ttcagtagtc ttgtcattca
      961 aaactgttgt gggctgtcca attagagcct gtgatgctgg ttgagaaagt tcaagatcaa
     1021 tcttttcttg acgctccaat cgagcaatct cttgatt
//
LOCUS       DASFQS010000201         1025 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.209, whole genome shotgun sequence.
ACCESSION   DASFQS010000201 DASFQS010000000
VERSION     DASFQS010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.209"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..364
                     /locus_tag="U1041_002264"
     CDS             <1..364
                     /locus_tag="U1041_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769333.1"
                     /translation="ARWISDITDDTDEKVDEQAYYDSDGTEETVVTGVKVAYSFEGLY
                     DPEDKAQKHIADLKLKLGNDRLVWHKVVSADKKKEWVGLATVTEIIAGSGAASEYEKF
                     GCKISYNSIPEESVPVGG"
     gene            409..861
                     /locus_tag="U1041_002265"
     CDS             409..861
                     /locus_tag="U1041_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012678871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769334.1"
                     /translation="MANGISVDVVRSGFPVSIGPVELWFDTSDEFLVTFFDLEQKAQK
                     RLAEFEKSIVEANLNKKLEEGITKDTLLGAIDLEKKLLEIQYDLLFGDGTFQKLYAEF
                     PDHQALDLTLEKVATLIEAKLSELKIERENIVKERINKYKKKSKTAKK"
     gene            870..>1025
                     /locus_tag="U1041_002266"
     CDS             870..>1025
                     /locus_tag="U1041_002266"
                     /inference="COORDINATES: protein motif:HMM:NF018553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769335.1"
                     /translation="MRLNDPLYDSFEFDGVVYPLDLSFNKVLDTFDCLRDDLLSELDK
                     VQSCVGII"
BASE COUNT          319 a          154 c          247 g          305 t
ORIGIN      
        1 ggctagatgg atttctgata taacggatga tacagacgaa aaagttgatg aacaggccta
       61 ttacgacagt gatgggacag aggaaacggt cgttactggt gtaaaagttg cctattcatt
      121 tgaagggttg tacgacccag aagacaaggc gcagaagcat atcgctgatt tgaaactcaa
      181 attaggaaac gaccgtcttg tctggcacaa agtcgtatct gctgataaga agaaagagtg
      241 ggtcggactt gcgactgtaa ccgaaattat tgcaggttct ggggcagctt ctgagtacga
      301 gaagtttgga tgtaagattt cctataactc tattccggaa gagtctgtgc cagtaggtgg
      361 ctagaggggt cttgtacctc tctttttgtt tattgaaaag gagaagatat ggcaaacggt
      421 atcagtgttg atgttgttcg tagcggtttt ccagtcagta ttggtccagt agagctttgg
      481 tttgatactt ccgatgaatt cttagtgact tttttcgatt tggaacagaa agcccaaaaa
      541 cggttggcag aatttgaaaa atcaattgtc gaagcgaatt tgaacaagaa gttagaagaa
      601 ggtatcacta aggacacctt gcttggagct attgacctag agaaaaaact acttgaaatt
      661 cagtatgatc tactctttgg tgatgggaca ttccagaaat tatatgcaga atttccagac
      721 catcaagcat tagatttaac gcttgaaaag gtagctacat tgattgaagc gaaattgtct
      781 gagttgaaaa ttgagcgtga aaacattgta aaagaacgta tcaacaaata taagaaaaaa
      841 tctaaaactg ctaagaagta ggtggtcagg tgagattaaa tgaccctctt tatgacagtt
      901 tcgaatttga tggtgtcgtt tatccgttag acctatcttt taataaagtc ttagatacat
      961 ttgattgtct acgagatgat ttgttgtctg aattggataa agtccagtct tgtgtcggta
     1021 ttatt
//
LOCUS       DASFQS010000202         1012 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.210, whole genome shotgun sequence.
ACCESSION   DASFQS010000202 DASFQS010000000
VERSION     DASFQS010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.210"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..713)
                     /locus_tag="U1041_002267"
     CDS             complement(<1..713)
                     /locus_tag="U1041_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4769336.1"
                     /translation="MKLTLHNYQVVAKDFIIGHPHAAVILDMGMGKTATTLSAVNELM
                     FDRFEVTKVLVIAPLRVANTVWSDEIEQWAELRHLRYSKIVGTPKQRKVALQKDADIY
                     IVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGT
                     PSSNGLMDLFAEFKVIDGGERLGRFIGEFRSRYFEEGRRNGNIVYEYIPMGYAECQIQ
                     DKISDITISMKALDYLDMP"
     gene            complement(694..975)
                     /locus_tag="U1041_002268"
     CDS             complement(694..975)
                     /locus_tag="U1041_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HEM4769337.1"
                     /translation="MREKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPKGKF
                     GLVEVKAPDQKPRMLQVSRHKLFERLGFKVYVIDRIEMIGEVLDEIDIT"
BASE COUNT          291 a          268 c          178 g          275 t
ORIGIN      
        1 tcaggcatat ccagataatc tagagccttc atggaaatgg taatatcact aatcttgtct
       61 tgaatttgac actccgcata acccatgggg atgtattcat agacaatgtt tccattgcga
      121 cgaccttctt caaagtagcg actacgaaac tcaccgatga agcgaccaag acgttctcct
      181 ccgtcaatga ctttaaactc tgcgaacaag tccatcagtc cattcgagct tggtgttcca
      241 gtcaacccaa cgatacgttt catgtaagga cgcattgcca taaaggcttt gaaacgtttg
      301 gactgccaag acttgaaaga actcaattca tcaatcacta ccatatccca cttaaaatag
      361 ggactacatt gttccaccaa ccaagggagg ttttcacgat tgacgatata gatatccgca
      421 tctttctgaa gagctacctt tcgttgcttg ggagtaccaa ctattttcga ataacgtagg
      481 tgacgcaact ccgcccattg ctcaatctca tcactccata ctgtatttgc gacccgaagt
      541 ggggcaataa ccaaaacctt agtgacttca aatctatcaa acatcagctc attcaccgca
      601 gacaaagttg tagccgtctt ccccatcccc atgtccagga taactgctgc atgagggtga
      661 cctatgatga agtccttggc gactacctga tagttatgta atgtcaattt catccagcac
      721 ctctccaatc atctcaatgc ggtcaatcac ataaacctta aagcctaacc gctcaaacag
      781 tttatgcctt gacacttgta acatccttgg cttttggtca ggagccttca cttccaccaa
      841 gccaaacttg ccctttggta aaaacaccaa gcgatctggc acaccagaaa aagatggtga
      901 tacccactta ggacaaatgc ctcctctagc tttcacagac ttcaccaagg cttgctcaac
      961 gtatttttct ctcatcgttc taaatcctct cgtcaaattg aagtgtgtag gt
//
LOCUS       DASFQS010000203         1008 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.211, whole genome shotgun sequence.
ACCESSION   DASFQS010000203 DASFQS010000000
VERSION     DASFQS010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.211"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            559..>1008
                     /locus_tag="U1041_002269"
     CDS             559..>1008
                     /locus_tag="U1041_002269"
                     /inference="COORDINATES: protein motif:HMM:TIGR03715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KxYKxGKxW signal peptide domain-containing
                     protein"
                     /protein_id="HEM4769338.1"
                     /translation="MNRQRFSKNFDEIDRKSQVKMYKAGKNWVRKVISQISLLRVIRS
                     RDDVTANIITVENRDCLDNRCHEYLKSILALGAAITGTSVSPTAFAEEYPLVVEQEVE
                     SSIDTLVDKDVVIVERVSSEIIDDSHLLISTDPSPSSNVNQSIDRMVS"
BASE COUNT          321 a          163 c          180 g          344 t
ORIGIN      
        1 gaaaagtcta gcatcaagtt atagtgtcag tagcccactc tcaaaataac tctaaaattt
       61 tcaaatttat aaatgcaaac acgtcctgtt ttaaattcaa ttcgttataa ttcaatgcaa
      121 gaaaagctgg gcaagacatc tatgatagct ccgccattct ctatttctag ctcaacctag
      181 ctttcgcatt tttatgctcg ggctgaaaca tttcaatgaa cggtttaact ccactggatt
      241 atttaaccta gttgtgctgt actttgtaga agtgactggt agctcgttgc cttttactaa
      301 aagtaaactg atattcaatg aaaatctata attaccggag tttatacctg tttacaccaa
      361 ctgaaataat aatgttaatg aaaacacaaa aagcgtttct ccccattctc tccattttgg
      421 tctcaatttt atactatttg ttgaataatt tgtcaaatgt tgatataatg acattggata
      481 atatatatat atatatatat atgcttgatt gcgtatgttt tatatataga gcaagttttc
      541 tttatataag gagtgtatat gaatcgtcag cgatttagca agaactttga tgaaattgac
      601 cgtaagagtc aagtgaagat gtacaaagct ggtaaaaact gggttcggaa agtaatatct
      661 cagattagtc ttttacgagt aattcgtagc cgtgatgatg taaccgctaa cataatcact
      721 gttgaaaata gggattgttt ggataatcga tgtcatgaat acttgaagtc tattttagct
      781 ttgggggcgg caattacagg tacttctgtt tcaccgactg cttttgcaga agagtatcct
      841 cttgttgtgg agcaagaagt agaaagtagt attgatactc ttgttgataa agatgtggta
      901 attgttgaaa gagtttcttc agaaataatt gatgatagtc acctactgat ttcaacagat
      961 ccatctccat catcaaatgt caaccaatcc attgatcgca tggtttca
//
LOCUS       DASFQS010000204         1001 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.212, whole genome shotgun sequence.
ACCESSION   DASFQS010000204 DASFQS010000000
VERSION     DASFQS010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.212"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            71..574
                     /locus_tag="U1041_002270"
     CDS             71..574
                     /locus_tag="U1041_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000361943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769339.1"
                     /translation="MDKVEYIAKNYRDMKMKLHLVQEKLLNYRPISENSVIQSLVFEK
                     SEHEKVKKSRNHGRSELISLSFREKQEQENQEYLSSLLNTYYCLKMDLYYFEFVMELI
                     PEDLKPLSKDLIYLGKSWTELEEIYEISHSTLAYRRRKILKQLRKCYRWTSKSLELKV
                     EDYHIPI"
     gene            760..987
                     /locus_tag="U1041_002271"
     CDS             760..987
                     /locus_tag="U1041_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000269808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769340.1"
                     /translation="MWTDGRIDYQGQKVDYIAKVSPQPSEVGIDLGCVFKLDIEVAEE
                     TIVSYDRGWEIYPDTEEREAILEAVLFDLTV"
BASE COUNT          354 a          152 c          209 g          286 t
ORIGIN      
        1 gcactaggaa acaaagatgc acaacaagaa cggctgattg aagctgttaa agcacaagta
       61 ggaggaacag atggataagg tggaatatat agctaaaaac tatcgtgaca tgaaaatgaa
      121 gttacattta gttcaggaga aattgctcaa ctatcgacct atctcagaga atagtgtgat
      181 tcagtcactg gtatttgaga agtcagagca tgaaaaggtc aagaaaagta gaaaccatgg
      241 tcgtagtgag ctgatttctc ttagttttag agaaaaacaa gaacaagaaa atcaagagta
      301 cctcagtagt ttgcttaata cctactactg cttaaaaatg gatctttact actttgagtt
      361 cgttatggag ctaatacctg aggatttgaa gccattatcc aaggatttaa tttacttagg
      421 caagagttgg actgaactag aagagattta tgaaatcagt cattcaacac ttgcttatcg
      481 taggcgtaag attctaaaac aattacgcaa gtgttatcgt tggacttcaa aaagtcttga
      541 acttaaggtg gaagattatc acatccctat ctagtgatgg ttgagtgcac taaattggta
      601 ctaaattagc actaaatttg tactggttta gtactgattt tcaacctaga catgtgatat
      661 acttaagatg tcaaaaaaga taaaaatctc cctcaaatga ctggatattc tttggctgat
      721 agggtaatat acacctagaa aaaccaaagg acaataacca tgtggactga cggacggatt
      781 gattatcagg gacaaaaagt ggattacatt gccaaggtta gtccccaacc ttcagaagtt
      841 ggaattgacc ttggatgtgt tttcaaatta gatattgaag tagctgaaga aacaatcgtt
      901 tcttacgaca gaggatggga aatctatcca gatacagaag aacgtgaagc cattcttgag
      961 gcggttttgt ttgatttaac tgtttaaaat atctttaaat t
//
LOCUS       DASFQS010000205          995 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.213, whole genome shotgun sequence.
ACCESSION   DASFQS010000205 DASFQS010000000
VERSION     DASFQS010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..995
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.213"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>995
                     /locus_tag="U1041_002272"
     CDS             <1..>995
                     /locus_tag="U1041_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HEM4769341.1"
                     /translation="LEGTDAHELCAYLVEKALGRNARDPTENLASYNDEMQDCAEEYR
                     NYVMEQVEKAKGYSRDPTVLVEQRLDFSKWVPEGFGTGDCLIVADGLLQVIDYKHGLG
                     ILVDANYNPQMMCYALGALEMFDGLYDFDKVTMTIFQPRKHNISTFEIEKTELLKWAE
                     NVLAPKAELAFKGEGELKSGKHCQFCKLKNVCRKRAEDNLALAKMEFANPTTLDYEDI
                     AEILPKLDLLVSWANDVKAYALNQATEGHHIPGYKLVEGRSVRKFSDESAVSQAVMEA
                     GFDPYEKKLLTITAMTKLLGKKTFNDLLGGFVIKPSGKPTLVPIDDSRQEMNLAK"
BASE COUNT          299 a          199 c          230 g          267 t
ORIGIN      
        1 ctcttgaagg tacggatgct cacgagttgt gtgcttatct agtcgagaaa gccttgggta
       61 ggaatgcgcg tgatccaact gagaatttag catcttataa cgatgaaatg caggattgtg
      121 cagaagaata ccgcaactat gtcatggagc aagttgagaa agccaaaggc tactctcgtg
      181 accctacagt tcttgtcgaa caacgactgg acttttctaa gtgggtacct gaaggatttg
      241 gaactggaga ttgccttatt gtggcagacg gacttcttca ggttattgat tataagcacg
      301 gacttggtat tctagttgat gcaaactaca acccgcaaat gatgtgttat gccctaggtg
      361 ctcttgagat gtttgatggg ctttatgatt ttgataaagt caccatgacc atctttcaac
      421 cacgaaaaca taacatatct acctttgaga tagaaaagac tgagttgctt aaatgggcgg
      481 aaaacgtact cgctccaaaa gctgaacttg cctttaaggg cgagggagaa ctaaagtctg
      541 gcaagcactg tcaattctgt aagctcaaga atgtctgtcg caaacgtgct gaggataatt
      601 tggcactagc caagatggag ttcgctaacc ctacaaccct tgattatgag gatattgcag
      661 agattttgcc taagctggac ttgctagttt cgtgggcaaa tgatgtcaaa gcctatgctt
      721 taaatcaagc gaccgaagga catcacatcc caggatacaa actagttgaa ggtcgctctg
      781 ttcgtaaatt ctcagatgag tctgccgtta gccaagctgt gatggaagct ggatttgacc
      841 cttatgagaa gaaacttcta accattacag ccatgacaaa attacttggc aagaaaactt
      901 ttaacgacct acttggtggt ttcgtaataa aaccaagtgg taaaccaact ctcgttccaa
      961 ttgacgatag ccgtcaagag atgaacctag caaaa
//
LOCUS       DASFQS010000206          968 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.214, whole genome shotgun sequence.
ACCESSION   DASFQS010000206 DASFQS010000000
VERSION     DASFQS010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.214"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            145..>968
                     /locus_tag="U1041_002273"
     CDS             145..>968
                     /locus_tag="U1041_002273"
                     /inference="COORDINATES: protein motif:HMM:NF020070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GBS Bsp-like repeat-containing protein"
                     /protein_id="HEM4769342.1"
                     /translation="MKKKSLLFLSLCAWTLQSHLVQADTIVDTASQASQETEMSSLSN
                     SNIEVSQRTSLAVANEGTKQSKTLVAENTTVSSLQTPSSEIVGSANSMSELTNQGESI
                     SDSTTISNEVKPDQETTSSNAISVTSGVSLTKENASVASSTSSTSAGTGNTVTTPSTN
                     VAAKSTVSSSSQSTTSTQASNVVAIENVNAVNGSFDVRVSKVSSPKEIKEVYIPTWSE
                     VNGQDDIIWYAAKRQLDGSYLINVDNAQHKKSVGKYHSHVYYLATDGSLSAIGATST"
BASE COUNT          341 a          170 c          181 g          276 t
ORIGIN      
        1 gatgaatgtt actaattggg aaataaaaaa ataggaaaaa ccttttcagt ctataaaaag
       61 tgtgctataa ttaatcagtg tatactaatt ttgagataat taatatcgca attttttagc
      121 atattggaat agaaggagta ttttgtgaaa aagaaatcat tattatttct ttccttgtgt
      181 gcttggacac ttcaaagtca tctcgttcaa gcagatacca tagtggatac tgcaagccaa
      241 gcatcgcaag aaacagaaat gtctagtttg tcaaactcga atattgaagt aagtcaacga
      301 acatccctag cagttgcaaa tgaggggacg aaacaatcga aaacgttagt agctgaaaat
      361 acgacagttt caagtcttca aacgccttca tctgagattg ttggctctgc taacagcatg
      421 agtgaactaa caaaccaagg cgaatctata tcagatagta caactatttc caatgaagta
      481 aaacctgatc aggaaacaac ttcttcaaat gctatttctg taacatcagg cgtttctttg
      541 acaaaagaaa atgcttccgt agcaagctcg acaagttcaa cttctgcagg cacaggcaat
      601 acagttacaa cgcctagtac aaatgttgct gctaaatcta cggtttctag ttcaagccaa
      661 tcaacgacaa gtacgcaggc atctaatgta gttgcaatcg aaaacgttaa tgcagtaaat
      721 gggagtttcg atgtacgtgt atcaaaagtt tcttctccca aagaaattaa agaagtatat
      781 attccaactt ggtcggaagt gaatggtcaa gatgatatta tttggtatgc agccaaacgt
      841 caattagatg gcagttacct aattaatgta gataatgccc aacataagaa atctgttgga
      901 aaatatcatt cgcatgtgta ttatctagct acagatggta gtttatctgc aatcggtgca
      961 acctcaac
//
LOCUS       DASFQS010000207          963 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.215, whole genome shotgun sequence.
ACCESSION   DASFQS010000207 DASFQS010000000
VERSION     DASFQS010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.215"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            3..917
                     /gene="yidC"
                     /locus_tag="U1041_002274"
     CDS             3..917
                     /gene="yidC"
                     /locus_tag="U1041_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006269468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM4769343.1"
                     /translation="MKKNKRILLTGLALSTLVFLSGCVQTKNGVPTGEGWVYNFLVAP
                     MGNLIKFFAENQGLGFGVAIIIVTLIVRLFIMPLGIYQSWKSTYQSEKMNYLKPILGP
                     IQERMKNASSQEEQLAAQQEYFAAQKQYGVSVFGGMGCLPILIQMPFFTALFYAARYT
                     EGISEATFLGIDLGSPSIILTAVAGVLYYIQSLLMQVGMDEEQKKQMRTVAIINPLFI
                     VMFSWSSPAGVTLYWVVGGFIGLVQQALTNFILKPRIRAKVEEEFKNNPPKPYKSTIK
                     DVTPKASAIIEEKTSKKSNRNAGKQRSR"
BASE COUNT          291 a          209 c          180 g          283 t
ORIGIN      
        1 ttttgaaaaa gaataaacga attttattaa caggtctagc cctgtctacg ctagtatttc
       61 tatcaggatg tgtgcagaca aagaacggtg ttcctactgg tgaaggttgg gtctacaact
      121 tccttgttgc cccaatggga aacctgatta aattcttcgc ggaaaaccaa ggactcggtt
      181 tcggcgttgc tattatcatc gtgacattga ttgttcgtct cttcatcatg ccactaggta
      241 tttaccaatc ttggaaatca acctatcagt ccgagaaaat gaattacctc aaaccaattt
      301 taggtccaat ccaagaacgc atgaaaaatg caagttccca agaagagcaa ttagctgccc
      361 aacaggaata ctttgctgct caaaaacaat atggtgtcag cgtatttggt ggaatgggct
      421 gccttcctat cttgattcaa atgccattct ttacggcact cttctacgca gctcgttaca
      481 cggaaggaat ctcagaagcg accttccttg gcattgacct tggttcacca agcatcattc
      541 ttactgccgt tgctggtgtc ctttattaca tccaatctct attgatgcaa gttggtatgg
      601 atgaagaaca gaaaaaacaa atgcggactg ttgctattat aaacccactg tttatcgtta
      661 tgttctcctg gtcatctcct gccggagtta cactatattg ggtagtcggt ggatttatcg
      721 gtcttgttca acaagctctt acaaacttca tcttgaaacc acgtatccgt gctaaggttg
      781 aagaagaatt taaaaataat cctccaaaac catataaatc aactatcaag gatgtaactc
      841 ctaaagcatc tgctatcatc gaagaaaaaa cgtctaagaa atcaaaccgt aacgccggta
      901 aacaacgttc tagataaaaa atcgcaacca tctgtttcag atggttgttt tcttatatag
      961 aca
//
LOCUS       DASFQS010000208          834 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.218, whole genome shotgun sequence.
ACCESSION   DASFQS010000208 DASFQS010000000
VERSION     DASFQS010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.218"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>834)
                     /locus_tag="U1041_002275"
     CDS             complement(<1..>834)
                     /locus_tag="U1041_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="primase C-terminal domain-containing protein"
                     /protein_id="HEM4769344.1"
                     /translation="VYVAMKEELCNQYKFFDDNAKDAARFFFGNPNAQVIWHDSWLII
                     DEDLFQAVSIDDEEDFDADFYTPTSGPIQQGSRNSTMSVFAAKILKRLGVTQEARDGF
                     DEQAQKCVPPLDKTELDTIWGSAVRFYNRTIKTSKGYVAPDAFNRETLKPDDYSDVGE
                     AGVLAREYANRLAYTNATDYLYYDGTHWRENKQLALGAVVHFTDEQLAEANALLESAV
                     KQLQSSGIDELTIKAGGKRLENAVETPLQLKYLKAYLAAKEFHKFVMKHRDYKNLMAV
                     Y"
BASE COUNT          237 a          190 c          142 g          265 t
ORIGIN      
        1 ttatatacag ccatcaaatt cttatagtca cgatgtttca taacaaattt atggaactct
       61 ttagctgcta gataagcttt taaatatttc aactgaagtg gagtttcgac tgcattttct
      121 agacgctttc caccagcctt aatggtcaat tcatcaatac ctgaagactg aagttgcttc
      181 actgcagatt ccaagagtgc attcgcttca gcaagttgtt catcagtaaa gtgtacaact
      241 gcccctaatg ccaactgctt gttctcacgc caatgagttc catcatagta aagataatcc
      301 gttgcattgg tataagcgag cctgttcgca tactctcttg caagaactcc cgcttctcca
      361 acatccgagt aatcatctgg ttttaatgtt tctctattga aagcatcagg agccacgtag
      421 cctttagatg tttttatagt tctgttgtag aatcgcacag cactacccca gatggtatct
      481 aactctgttt tatcaagtgg cggtacacat ttctgtgcct gctcatcaaa accatctctt
      541 gcttcttgcg ttacacctaa acgtttgaga attttcgcag caaatacaga catcgttgaa
      601 ttacgactgc cttgctggat tggtccactt gtaggagtat agaagtctgc atcgaaatct
      661 tcctcgtcat caatagatac agcttgaaac aaatcttcat caataattag ccatgaatca
      721 tgccatataa cctgtgcatt tggatttcca aagaagaaac gtgccgcatc cttggcatta
      781 tcatcaaaaa acttgtattg attacaaagt tcttccttca tagctacgta gaca
//
LOCUS       DASFQS010000209          827 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.219, whole genome shotgun sequence.
ACCESSION   DASFQS010000209 DASFQS010000000
VERSION     DASFQS010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.219"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(101..619)
                     /locus_tag="U1041_002276"
     CDS             complement(101..619)
                     /locus_tag="U1041_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEM4769345.1"
                     /translation="MMKQKYYQSPAEIASFSPRPSLADSKAVLNQAVADLSVAHSILH
                     QVHWYMRGRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLKE
                     VPGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIW
                     MLQAELGQAPKL"
BASE COUNT          263 a          176 c          141 g          247 t
ORIGIN      
        1 ctggagttca tcaaggcaag ttgacaacgg ataattttga tattcgaaga gtattaaata
       61 atgcagcaaa aaagagtcct actgtggacc cttcatctgt ttacaactta ggtgcttgac
      121 caagttctgc ctgcaacatc caaatatgtt tttcaatact agccttagcc acattgaaaa
      181 tgtcgttggt tacgctatca ccttcttcat cactgacatc aaatcccttt tggaaaagag
      241 cagccagata gcggaacacc tctaccacac gcgccaattg ctcttcaatc gttacattgt
      301 aatcaccagg aacttctttg agctgactat tttcactaaa ctctttaagg gtagaaaatg
      361 gtgccccacc taaggtgatt aaacgttcac tcatctcatc caaataacca tcaatttctt
      421 ccatatattc atccatcttt ggatgccaaa tcataaagcc acgaccacgc atataccagt
      481 gaacttgatg gaggattgaa tgggctactg ataaatcggc caccgcttga ttcaaaacag
      541 ccttagaatc agccagtgat ggacgcgggc tgaaagacgc aatttctgct ggagattgat
      601 aatatttttg tttcatcata tatcaccctt tcttttattt ataattatta taaataaaag
      661 aagaaaaaat tgcaagaatt atccctcctc ctctgactta ttggcagaca aatcccttgc
      721 tatattaact tatatacgat agactagtaa gtaagaatag tatgtgggag tgggaaagaa
      781 ctcgactagt tcaaaaagag ttcgtcaaca agtctttatt tctagtt
//
LOCUS       DASFQS010000210          809 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.220, whole genome shotgun sequence.
ACCESSION   DASFQS010000210 DASFQS010000000
VERSION     DASFQS010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.220"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>809
                     /locus_tag="U1041_002277"
     CDS             <1..>809
                     /locus_tag="U1041_002277"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4769346.1"
                     /translation="PEAVQEKEEEGTKAIAADVLDAAKLDAKNKIAKDLATVEAAIDA
                     NSNLSDGEKEVAKLAAQAKAAEAVANIEKATTPEAAQTLEDAAVKDLANIEIKAAYDD
                     AVKAIEAADNLSTAAKTKALDDLKKARQAAEEAVKNATTADEVAKGALDGLKSIAKVE
                     AKAAADDAKAAIAQNSNLTDAEKKVYTDAIDKALKDTETKIDAATDADTVDAETVLAQ
                     KEIAKQEVAAATADAVEGIEANANLTPEEKAEYKANVAKAAADAEKAITDAT"
BASE COUNT          315 a          164 c          195 g          135 t
ORIGIN      
        1 ccagaagcag ttcaagaaaa agaagaagaa ggcacgaaag caatcgctgc agatgttctt
       61 gacgcagcta aattggatgc taagaacaag attgctaaag acttggcaac tgtagaagca
      121 gctatcgatg cgaactcaaa cttgtcagac ggtgagaaag aagtagcgaa acttgcagct
      181 caagctaagg cagcagaagc agttgcgaac atcgaaaaag caacaacacc agaagcagct
      241 caaaccttag aagatgcagc tgtgaaagac cttgcaaaca tcgagattaa agcggcttac
      301 gatgacgcag tgaaagcaat cgaagcagca gacaacttgt caacagcagc taaaacaaaa
      361 gcccttgacg acttgaagaa agctcgtcaa gcagcagaag aagctgtgaa gaatgcaaca
      421 acagctgatg aagttgccaa aggagcactt gatggcttga aatctattgc taaagttgaa
      481 gctaaagcag cagctgacga tgcaaaagca gctatcgcgc aaaattcaaa cctgacagat
      541 gctgagaaga aagtctacac agatgcaatc gataaagcgt tgaaagatac agaaactaag
      601 attgacgctg caacggatgc agatactgtt gacgctgaaa cagtccttgc tcaaaaagaa
      661 atcgctaagc aagaagtagc agcagctaca gcagatgctg tggaaggtat cgaagcaaat
      721 gctaacttga caccagaaga gaaagcagaa tacaaagcaa acgttgctaa ggcagcagca
      781 gacgctgaaa aagctatcac agatgcaac
//
LOCUS       DASFQS010000211          808 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.221, whole genome shotgun sequence.
ACCESSION   DASFQS010000211 DASFQS010000000
VERSION     DASFQS010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.221"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            1..683
                     /locus_tag="U1041_002278"
                     /pseudo
     CDS             1..683
                     /locus_tag="U1041_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="matrix-binding protein EbhB"
BASE COUNT          269 a          160 c          198 g          181 t
ORIGIN      
        1 atgcagaatt tgagaaacgt caagtagcca ttgataacgc tattgaacag gctcaaagtc
       61 atggggaggt ttatgcggat cgattaaagg ccagcattga tagtgaactt tcttctatcc
      121 accaacagat gcggcaacag gaagaggagc agcaacgcac aactcgtgat ttaatggcaa
      181 aggctggggt aaataccaac ctagccacag aagccaaaca aaaggcagaa caggctcaaa
      241 ctggggcaac tgaagccctc agaagggcag aacaagccaa gcttgatgcc attcaagagg
      301 ctaaccgctt gactgtaacg gagcgtagtc agacagagtc caaaattgcg acagcaaaat
      361 cacaggctat ctctgaagct agtcgattgg ttgatgtagc aaaatcactg ttgagtggac
      421 agttggcaac tgtcagtacc aatctctcgc aaaccaagga ggatataaaa cttcttgcga
      481 gtaagcaagt tgtagatagt ctgactgatc gagtaaacgg tgcagaatcc atgattcaag
      541 tgcaagcaga ccaaatttcc cagcgtgtaa aaaacagtga ttttaaccaa gcgaaacaga
      601 gaatcgaaac tgccgagtcg tctattacgc aattggggaa tcggataacg actgagattc
      661 gagagaccat agctaagatt ccagttgatt ttggtggtcg aaattacata ctaaaaagtg
      721 atacttatat tacatctggg agtaagtttc tagatagtgc ttcggacttt atcgactatg
      781 ctcaggcagg gaagtttgtg acgatcag
//
LOCUS       DASFQS010000212          674 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.222, whole genome shotgun sequence.
ACCESSION   DASFQS010000212 DASFQS010000000
VERSION     DASFQS010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.222"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>674)
                     /locus_tag="U1041_002279"
     CDS             complement(<1..>674)
                     /locus_tag="U1041_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769347.1"
                     /translation="AYHISDDIMTRLISPFRCEQVPCATALSSMVMASKSPLGDFSFT
                     SDIVKNRTYTTDKEQTLYSTLLDGKHSILGTWEGELVRDNLAVTIKGERGQDRGVVIS
                     THYNLKKYQRTKESSQIITRIHATSSFKQEGQDRETVLQVTVDSPLINSYPFINEVTY
                     TNNSVRTRQELIEWASSKFRLEGIDKPKDAIIIEAFELDGQTVHLGDTVTLKSKLHGI
                     DVRKKA"
BASE COUNT          173 a          151 c          131 g          219 t
ORIGIN      
        1 atggctttct tcctcacatc aatgccgtgt agcttgcttt ttaaagtcac tgtatcgcct
       61 aaatgaactg tttgtccatc taactcaaat gcctcaatga tgatggcatc ttttggctta
      121 tcgattccct ctaagcgaaa cttgctacta gcccactcta ttaactcttg acgagttctg
      181 acactattat ttgtataggt cacttcattg atgaatggat aggagtttat caacggacta
      241 tctacagtga cttgaagtac agtctctcta tcctgcccct cctgtttgaa gcttgaggtg
      301 gcatggatac gagtgataat ctgtgaactt tccttggttc gctgatactt tttcaaattg
      361 tagtgagtag aaataacaac tccacggtct tgtccacgct caccctttat agttacggca
      421 aggttatcac gaaccagctc tccctcccaa gtaccaagga tagagtgttt accatccagt
      481 agtgtggagt acagagtttg ttccttgtct gttgtatagg ttctgttctt gacaatgtca
      541 cttgtaaaag aaaaatctcc caatggagac ttgcttgcca tgaccatact tgatagagct
      601 gttgcacagg gtacctgttc acacctaaat ggcgatatca acctagtcat gatgtcatct
      661 gatatatgat aagc
//
LOCUS       DASFQS010000213          648 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.223, whole genome shotgun sequence.
ACCESSION   DASFQS010000213 DASFQS010000000
VERSION     DASFQS010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.223"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..506)
                     /locus_tag="U1041_002280"
     CDS             complement(<1..506)
                     /locus_tag="U1041_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4769348.1"
                     /translation="MKLTLHNYQVVAKDFIIGHPNAAVILDMGMGKTATTLSAVNELM
                     FDRFEVTKVLVIAPLRVANTVWSDEIEQWAELRHLRYSKIVGTPKQRKVALQKDADIY
                     IVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGT
                     PSSNGLMD"
     gene            complement(487..>648)
                     /locus_tag="U1041_002281"
     CDS             complement(487..>648)
                     /locus_tag="U1041_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003053593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HEM4769349.1"
                     /translation="NGKFGLVEVKAPDQKPRKLQVSRHKLFERLGFKVYVLDHIEMIG
                     DVLDEIDIT"
BASE COUNT          180 a          168 c          117 g          183 t
ORIGIN      
        1 aagtccatta gtccatttga acttggtgtt ccagtcaacc caacgatacg tttcatgtaa
       61 ggtcgcattg ccataaaggc tttgaagcgt ttggactgcc atgacttgaa ggaactcaat
      121 tcatcaatca ccaccatatc ccacttgaaa tagggactgc attgttccac caaccaaggg
      181 aggttttcac gattgacgat atagatatcc gcatctttct gaagagctac ttttcgttgc
      241 ttgggagtac caactatttt cgaataccgt aagtgacgca actccgccca ttgctcaatc
      301 tcgtcactcc agaccgtgtt tgcaacacga agtggggcaa tgaccaaaac ctttgtcacc
      361 tcaaaccgat caaacatcaa ctcgttcact gcagacaagg ttgtagctgt ctttcccatc
      421 cccatgtcta agatgaccgc tgcattaggg tgaccaatga taaagtcctt ggcgactact
      481 tgatagttat gtaatgtcaa tttcatctag cacatctcca atcatctcaa tgtggtcaag
      541 aacataaacc ttaaaaccta accgctcaaa cagtttatgc cttgacactt gtaacttcct
      601 tggcttttgg tcaggagcct ttacttccac caagccaaac ttgccatt
//
LOCUS       DASFQS010000214          605 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.224, whole genome shotgun sequence.
ACCESSION   DASFQS010000214 DASFQS010000000
VERSION     DASFQS010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.224"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>605)
                     /locus_tag="U1041_002282"
     CDS             complement(<1..>605)
                     /locus_tag="U1041_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000176349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEM4769350.1"
                     /translation="CIGYCEMDKFARKSYEAMYDTKGEWFHDDITSIDPAQLPKADLW
                     TAGSPCQNVSIAGKRAGLYGERSGLFFTFVDLLQSQEEEDKPEWILLENVKGLLSSGG
                     GRDYLDYLSILDETGYDLEWQVFNSKDYGVPQNRERIYTLGHLRSRGQRKVLPISGES
                     GSHLKQLVGGMQSYRVYDPSGIATTLVGEGGGLGAKTGLYL"
BASE COUNT          149 a          152 c          120 g          184 t
ORIGIN      
        1 attagataaa gacctgtctt agcacccagt cctcccccct caccaacaag agttgtggca
       61 attccactag ggtcgtagac acggtagctt tgcataccac ctacaagttg cttaagatgg
      121 ctaccgcttt ctccgctgat aggtaatact tttcgttgac ctctgcttct aagatgtccg
      181 agagtgtaga tgcgttctcg attttgggga actccgtagt cttttgaatt gaacacttgc
      241 cactcaaggt cgtaccctgt ttcatccaag atagagagat agtcgagata atctcgtccc
      301 ccgccacttg ataaaagtcc cttaacattt tcaaggagta tccactcggg tttatcttct
      361 tcctcttggc tttggaggag gtcaacaaat gtaaaaaaga gtccacttcg ttcaccgtat
      421 aggcctgctc gcttccctgc gatagacaca ttttgacaag ggcttcccgc agtccataaa
      481 tctgcttttg gaagttgtgc tgggtcaatg cttgtgatgt cgtcatgaaa ccattctcct
      541 ttcgtatcat acattgcttc ataagatttt cgtgcaaact tatccatttc acagtaaccg
      601 ataca
//
LOCUS       DASFQS010000215          596 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.225, whole genome shotgun sequence.
ACCESSION   DASFQS010000215 DASFQS010000000
VERSION     DASFQS010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.225"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>596
                     /locus_tag="U1041_002283"
     CDS             <1..>596
                     /locus_tag="U1041_002283"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4769351.1"
                     /translation="AIDNATLVGEKAFATAELEAAADDAKKAIDANTHLTDDQKQAAK
                     DAVDAELAKAKEAVVAAKTADEVDAATLVGEKAVAKEEIKAAADDAKKAIDANSNLTD
                     DEKAAAKAAVDAEVAKANEAIDKAATADAVDTATLVGEKAVAKEELKAAADDAKKAID
                     ENANLTPEEKAAAKKAVDDEVAKAEKAIDAATKAEEVD"
BASE COUNT          223 a          128 c          158 g           87 t
ORIGIN      
        1 tgctatcgac aacgcaacgc ttgtaggtga aaaagcattc gctactgcag aacttgaagc
       61 agcagccgac gatgctaaga aagccatcga tgccaacact cacttgacag acgaccagaa
      121 gcaagcagct aaagatgcag tcgatgctga attggcaaaa gctaaggaag ccgttgtagc
      181 agcgaaaaca gctgatgaag ttgatgcagc aactcttgta ggtgagaaag cagtcgctaa
      241 ggaagaaatc aaggcagccg cagacgatgc taagaaagct atcgatgcta acagcaactt
      301 gacagacgac gagaaagcag ccgctaaggc agctgtagat gcagaagtag cgaaagctaa
      361 cgaagctatc gacaaggcag caacagccga tgcagtagac acagctacac tcgtaggtga
      421 gaaagcagtc gctaaagaag aacttaaagc ggcagcggac gatgctaaga aagctatcga
      481 cgaaaacgca aacttgacac cagaagaaaa agcagcagct aagaaagccg tagatgatga
      541 agttgctaag gcagaaaaag ccatcgacgc agcaaccaaa gctgaagaag tagatg
//
LOCUS       DASFQS010000216          576 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.226, whole genome shotgun sequence.
ACCESSION   DASFQS010000216 DASFQS010000000
VERSION     DASFQS010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.226"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>576)
                     /locus_tag="U1041_002284"
     CDS             complement(<1..>576)
                     /locus_tag="U1041_002284"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769352.1"
                     /translation="DVDALVLALVDAEVLALVEADVLADVEADVLADVDADVLALVEA
                     LVLALVEAEVLADVEADVLADVEAEVLADVDADVLADVDAEVLALVDADVLADVEALV
                     LALVEADVLALIEAEVLADVEAEVLALVEALVLADVDADVLADVDAEVLALVEADVLA
                     DVDAEVLALVEALVLADVEADVLALVEALVL"
BASE COUNT          165 a          192 c          118 g          101 t
ORIGIN      
        1 caagcacaag tgcttcaacc agcgcaagca cgtccgcttc aacatcggca agtacaagtg
       61 cttcaacaag tgcaagtacc tccgcatcaa cgtcagccag cacgtctgct tcaacaagcg
      121 caagtacctc cgcatcaacg tcggcaagta cgtctgcatc gacgtcagca agtacaagtg
      181 cctcaacaag tgcaagtacc tccgcctcaa catcggcaag tacttctgcc tcaatgagtg
      241 ccagcacgtc tgcctcaaca agtgcaagca caagtgcttc aacgtcagcc agcacgtcag
      301 catcaaccag cgcaagtacc tccgcatcaa cgtcggcaag tacgtctgca tcaacatcgg
      361 caagtacctc cgcctcaacg tcagcaagta cgtccgcttc aacatcggca agtacttctg
      421 cctcaacaag tgcaagtacc agtgcctcaa ccagcgcgag cacgtccgca tcaacgtcag
      481 caagtacgtc cgcttcaaca tcggcaagta cgtcagcctc gacaagtgca agtacctccg
      541 catcaacaag tgcaagtaca agtgcatcaa cgtcag
//
LOCUS       DASFQS010000217          542 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.227, whole genome shotgun sequence.
ACCESSION   DASFQS010000217 DASFQS010000000
VERSION     DASFQS010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.227"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(20..439)
                     /locus_tag="U1041_002285"
     CDS             complement(20..439)
                     /locus_tag="U1041_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769353.1"
                     /translation="MRESITIAGTTYELATNAYTPIAYKEQFGKDYFQDLFSMVNSQA
                     ILAKLDQLEEGEDLQAHHIDVSILSDFDMTFFHRIFWVFAKSANPRVKPFVDFYMEME
                     EFPVQDIAPVLMNMLNQGMSTRKKQMKQKQRVKKSSQ"
     gene            complement(450..>542)
                     /locus_tag="U1041_002286"
     CDS             complement(450..>542)
                     /locus_tag="U1041_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769354.1"
                     /translation="LDKVVRRRTTEETSDEIRQNWFKAVFEPRK"
BASE COUNT          154 a          126 c           88 g          174 t
ORIGIN      
        1 caacaggaga aataactctc tactgtgaag atttcttcac tcgctgtttc tgtttcatct
       61 gcttttttct agttgacatc ccttggttca acatattcat caagacaggt gcaatatcct
      121 gcacagggaa ttcttccatc tccatataaa aatccacaaa tggcttcact cgtggattgg
      181 ctgacttcgc aaagacccaa aaaatccgat ggaaaaatgt catatcgaaa tcagacaaaa
      241 tagaaacgtc aatatgatgt gcctgtaaat cttctccttc ttctaactgg tcaagttttg
      301 ccaagattgc ttgactattg accatagaga ataaatcttg aaaataatcc ttaccaaact
      361 gctctttata agcaattgga gtgtaggcat tggttgctaa ctcgtaggtc gttcctgcta
      421 tggtaatact ttctctcatt gccttctcct tacttacgag gttcaaaaac tgccttgaac
      481 cagttttgac gaatctcatc actcgtttcc tccgttgttc gtctacgcac aaccttatca
      541 ag
//
LOCUS       DASFQS010000218          542 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.228, whole genome shotgun sequence.
ACCESSION   DASFQS010000218 DASFQS010000000
VERSION     DASFQS010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.228"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>542)
                     /locus_tag="U1041_002287"
     CDS             complement(<1..>542)
                     /locus_tag="U1041_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HEM4769355.1"
                     /translation="AYIEIPKKNGKSELAAAIALYLLYADNEASAEVYGAACDRNQAS
                     IVFDVAKQMVQMSRPLEKRSKIMGATKRIVNYSNAGFYQVLSAETGTKHGLNVSGLVF
                     DEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDRNSICYELHTKALDILNGRKK
                     DTSFYPVVYGLSDEDDWNDEA"
BASE COUNT          152 a          129 c           99 g          162 t
ORIGIN      
        1 gcttcatcat tccaatcatc ttcatcggat aatccataaa ccactggata gaatgaagtg
       61 tccttctttc taccattcag aatatccaat gctttagtat gcaattcata acagatggag
      121 ttcctatccg ttccagctgt tgtgataata aaaaagaggg gttgttccct tgcgtcaccc
      181 gaccctttgg tcaatacatc atacaaatga cgatttggct gagcatggat ttcatcaaag
      241 accaagccag atacgtttag tccatgcttt gtcccagtct ctgcagaaag aacttggtaa
      301 aacccagcgt tagaataatt tacaatacgc ttggtagctc ccattatctt agaccgcttt
      361 tccaaggggc gactcatctg taccatctgt ttggccacat caaatacgat tgatgcttgg
      421 tttcggtcac aagcggcacc ataaacttcc gcactggctt cattatccgc atataataaa
      481 taaagagcga tagccgctgc tagctcagac ttgccattct ttttaggaat ttctatatag
      541 gc
//
LOCUS       DASFQS010000219          535 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.229, whole genome shotgun sequence.
ACCESSION   DASFQS010000219 DASFQS010000000
VERSION     DASFQS010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.229"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..486
                     /locus_tag="U1041_002288"
     CDS             <1..486
                     /locus_tag="U1041_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM4769356.1"
                     /translation="NHLPKVGANDDGTWRRLVVIPFNAKITGRSDIKNFADHLYDNAA
                     PAILSWIIEGAEKAIKANFKTKVPTAVSSSVKAYREANDWLGHFLSDCCQVGDQLTEK
                     SGELYSQYRAYCAKNMEYTRSTTDFYSALDQAGFKRKRTSKGNFILGLKLVDDGYDFL
                     D"
BASE COUNT          167 a          106 c          116 g          146 t
ORIGIN      
        1 aaccatctgc ctaaagtagg agcgaacgat gatggaactt ggcgacgttt ggttgttatt
       61 ccctttaatg ccaaaatcac tggtcgctca gacatcaaaa actttgcgga tcatttgtat
      121 gacaatgcag caccagcaat tttgtcttgg ataatcgaag gtgcagaaaa agccatcaaa
      181 gcgaacttca aaacaaaagt accaactgcc gtttcatctt ccgtcaaagc ctatcgtgaa
      241 gcaaatgatt ggttaggaca cttcctaagt gactgttgtc aagttggtga tcagttgaca
      301 gaaaaatcag gagaactcta cagtcagtat cgtgcctatt gcgccaaaaa catggagtac
      361 acacgcagta cgaccgattt ttattctgct cttgatcagg cagggtttaa gcgaaaacgg
      421 acaagtaaag gtaacttcat tcttgggttg aaattggttg atgatggcta tgatttctta
      481 gattaatgac caacattttt agccaactta cttccacaag agaggtgatg gacta
//
LOCUS       DASFQS010000220          535 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.230, whole genome shotgun sequence.
ACCESSION   DASFQS010000220 DASFQS010000000
VERSION     DASFQS010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.230"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..486
                     /locus_tag="U1041_002289"
     CDS             <1..486
                     /locus_tag="U1041_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM4769357.1"
                     /translation="NHLPKVGANDDGTWRRLLVIPFNAKITGRSDIKNFADHLYDNAA
                     PAILSWIIEGAEKAIKANFKTKVPTAVSSSVKAYREANDWLGHFLSDCCQVGDQLTEK
                     SGELYSQYRAYCAKNMEYTRSTTDFYSALDQAGFKRKRTSKGNLILGLKLVDDGYDFL
                     D"
BASE COUNT          160 a          108 c          118 g          149 t
ORIGIN      
        1 aaccatctgc ctaaagtagg ggcgaacgat gatggaacgt ggcgacgttt gcttgttatc
       61 ccatttaatg ccaaaatcac tggtcgctct gacatcaaaa actttgcgga ccatctgtat
      121 gacaatgcgg caccagcaat tttgtcttgg attatcgaag gtgcagaaaa agctattaaa
      181 gcgaacttca aaacaaaagt accaactgct gtatcctctt ccgtcaaagc ctatcgtgag
      241 gccaatgatt ggttaggaca cttccttagt gactgctgtc aagttggtga tcagttgaca
      301 gaaaaatcag gagaactata cagtcagtat cgtgcttatt gtgccaaaaa catggagtat
      361 acacgcagta cgaccgattt ttattctgct cttgatcagg caggttttaa acgaaaacgg
      421 acaagtaaag gtaacctcat tcttggtttg aaattggttg atgatggcta tgatttctta
      481 gattagtgac cagcattttt agccacctta cctccacaag agaggtgatg gacta
//
LOCUS       DASFQS010000221          527 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.231, whole genome shotgun sequence.
ACCESSION   DASFQS010000221 DASFQS010000000
VERSION     DASFQS010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.231"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>527
                     /locus_tag="U1041_002290"
     CDS             <1..>527
                     /locus_tag="U1041_002290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769358.1"
                     /translation="NVADGTAVTVVAENGSVSSPEVGSTVVPVPTPELPAIPAKPTSV
                     TNADGSVTIVPPVENVTGLDITFTPEGATEPVTVTLGKDATGAWTAPADSGLVVNPDG
                     TITIPADRLADGTEGQVGLVAKNGDLTSNDPAPQVPETPAKSSVETNENGSVTIVPPV
                     ENVTGIDITFTPEGA"
BASE COUNT          156 a          125 c          124 g          122 t
ORIGIN      
        1 aacgtagccg atggtacagc cgtgacggta gtggctgaga atggttcagt atcttcacca
       61 gaagtaggct caacagttgt tcctgttcca actccagaac ttccagctat cccagctaag
      121 ccaacatcag ttactaatgc agacggtagc gtaacaattg ttccaccagt tgaaaatgtt
      181 acaggtcttg acattacctt cacaccagaa ggtgcgacag aaccagttac tgtgacgctt
      241 ggtaaggacg caactggcgc atggacagca ccagctgatt caggtcttgt tgtcaatcca
      301 gatggcacta ttaccatccc agctgatagg ctagcagatg gtactgaagg acaagtaggt
      361 cttgtagcta agaatggcga cttgacatca aatgatccag ctcctcaagt accggaaact
      421 ccagctaagt caagcgtaga gaccaatgaa aatggtagcg tgacaattgt tccaccagtg
      481 gaaaatgtta caggcattga cattaccttt actccagaag gcgcaag
//
LOCUS       DASFQS010000222          526 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.232, whole genome shotgun sequence.
ACCESSION   DASFQS010000222 DASFQS010000000
VERSION     DASFQS010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.232"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>526)
                     /locus_tag="U1041_002291"
     CDS             complement(<1..>526)
                     /locus_tag="U1041_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrix-binding protein EbhB"
                     /protein_id="HEM4769359.1"
                     /translation="TVTQEMYQHSKGFELQVRVDGVKTGKFHVRALMVSTGDIFPDYW
                     TPSLDDFTTVTAFHEVRDTVSSHTRTIGDHTNQISQVVQTATGIVTRVGNLETSRATT
                     AAVNAIQTQVSTLAGSWSVRNLTSAGTVLSQLNLNKDGTVKIDGKLVQITGTTYIQEG
                     VISSGKIASLDAGKI"
BASE COUNT          133 a          122 c          110 g          161 t
ORIGIN      
        1 taatcttgcc tgcatcaaga cttgcaatct taccacttga gatgacaccc tcttggatat
       61 aggtagttcc tgtaatttgg acgagttttc catcgatttt gactgtgcca tccttattga
      121 gattgagctg actcaggact gttcctgcac tggtcaaatt tcgaaccgac cacgaccctg
      181 caagagttga aacttgagtt tgaatggcat tgacggcagc cgttgtcgct cgacttgttt
      241 ctagattgcc aactcgtgtc acaatcccag tagccgtttg aacaacctga ctgatttgat
      301 tggtgtgatc tccaattgtt cgagtgtgac tgcttacagt atcccgcact tcatgaaagg
      361 cggttacagt cgtaaagtca tctaatgacg gtgtccaata gtctggaaaa atatcaccag
      421 ttgataccat taaggctctc acatggaact taccagtctt aaccccatca actctgactt
      481 gaagttcaaa tcctttagag tgttggtaca tctcttgagt gacagt
//
LOCUS       DASFQS010000223          525 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.233, whole genome shotgun sequence.
ACCESSION   DASFQS010000223 DASFQS010000000
VERSION     DASFQS010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.233"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..191)
                     /locus_tag="U1041_002292"
     CDS             complement(<1..191)
                     /locus_tag="U1041_002292"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769360.1"
                     /translation="MLSLLDKTVRTAKWHGKPLPETIKASVKENLNGDFVLNFTYPIT
                     DSGLFRELKEDYLVRSPVPV"
     gene            complement(193..>525)
                     /locus_tag="U1041_002293"
     CDS             complement(193..>525)
                     /locus_tag="U1041_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4769361.1"
                     /translation="KTTTSQVFRTNGVLRCQGSAIAFPKITISGNSTSETSFMIGDDV
                     IRLERLQETLIMDNNPSQPNFKTQRGQPVKWSGDFISIDSGRNDSVGVVLGAGITSLT
                     IEMNWGWA"
BASE COUNT          143 a          121 c           96 g          165 t
ORIGIN      
        1 actggaacag gactacgaac gaggtagtcc tcttttaact ctcgaaatag tccgctatct
       61 gtgattggat aggtaaaatt cagtacaaaa tccccattca agttttcttt aacgcttgcc
      121 tttatggtct ctgggagtgg tttcccatgc cattttgccg ttcgaacggt tttatctaat
      181 aatgatagca ctctatgccc acccccaatt catttctatt gttaatgatg tgatgccagc
      241 acctaagaca actccaaccg agtcatttct gcctgaatca atggaaataa aatcgccaga
      301 ccattttaca ggctgacctc tttgtgtctt aaaatttggc tgactaggat tattatccat
      361 aatgagtgtt tcttgtaatc tctccaagcg gatgacatca tccccaatca taaagctagt
      421 ttcactagtc gagttgccac ttatggtaat ctttggaaaa gcgatagctg aaccttggca
      481 tcgcaaaaca ccattagttc taaacacctg cgaggtcgtc gtttt
//
LOCUS       DASFQS010000224          518 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.234, whole genome shotgun sequence.
ACCESSION   DASFQS010000224 DASFQS010000000
VERSION     DASFQS010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.234"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>518
                     /locus_tag="U1041_002294"
     CDS             <1..>518
                     /locus_tag="U1041_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM4769362.1"
                     /translation="PQIPGVPAGEEPKVPYPFDPTNPDKPIDPTTPYPYGEVPSIPNV
                     PGYTPVDPKTNEPLKPVDPNDPGKGYVPSTPDETGKDTPIPYVQNGNVVVNYVTEDGT
                     VIKAPVQDETDAPAGKSYDTTDNKPNTITTEDGTTYELVRVEGSETGTVVGGKTTEVT
                     YVYRKVETPAKKV"
BASE COUNT          186 a          120 c           98 g          114 t
ORIGIN      
        1 ccacaaattc caggtgtacc agcaggagaa gaaccaaaag ttccatatcc attcgatcca
       61 actaacccag ataagccaat tgatccaaca acaccttacc catatggtga agttccatcc
      121 attccaaacg ttccaggcta cacaccagta gatcctaaga ccaacgaacc attgaaacca
      181 gttgatccaa atgatccagg taaaggttat gtgccatcaa ctccagatga aactggaaaa
      241 gatacaccaa tcccttacgt tcaaaacggt aatgttgtgg ttaactacgt aacagaagat
      301 ggtacagtta tcaaagcacc agttcaagac gaaacagacg ctccagcagg taagtcttat
      361 gacacaactg ataacaagcc aaacactatc actacagaag atggtacaac ttatgagctt
      421 gttcgtgtgg aaggttcaga aactggtact gttgtaggtg gtaagactac tgaagtaaca
      481 tacgtttacc gtaaagtaga aacacctgct aagaaggt
//
LOCUS       DASFQS010000225          518 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.235, whole genome shotgun sequence.
ACCESSION   DASFQS010000225 DASFQS010000000
VERSION     DASFQS010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.235"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>518
                     /locus_tag="U1041_002295"
     CDS             <1..>518
                     /locus_tag="U1041_002295"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4769363.1"
                     /translation="AEKAIDKATTADAIDNATLVGEKAFAKEELEAAADDAKKAIDAN
                     DNLTPEEKAAAKAAVDTEVAKANDAIDAATKADEVETATLVGEKALAKEELKAAAEDA
                     KAAIDANDNLTPEEKAVAKAAVDAEVAKANEAIDKAATADAVDAATLVGEKAVAKEEL
                     KAAAEDAKKAIDA"
BASE COUNT          203 a          108 c          134 g           73 t
ORIGIN      
        1 gcagaaaaag ccatcgataa agcaactaca gcagatgcta tcgacaatgc aacgcttgta
       61 ggtgaaaaag cattcgctaa agaagaactt gaagccgcag ctgacgatgc taagaaagca
      121 attgacgcaa acgacaactt gacaccagaa gagaaagcag ccgctaaggc agcagtagat
      181 actgaagtag cgaaagctaa cgacgcaatc gacgcagcaa ctaaagcaga cgaagttgag
      241 acagcaactc ttgtaggtga gaaagcactt gctaaagaag aacttaaggc agcagcagaa
      301 gatgcgaaag cagcaatcga tgctaacgac aacttgacac cagaagagaa agcagtcgct
      361 aaggcagcag tagatgcaga agtagctaaa gctaacgaag ctatcgacaa ggcagcaacc
      421 gcagatgcag tagacgcagc aactcttgta ggtgaaaaag cagtcgctaa ggaagagctt
      481 aaagcggcag cagaagatgc taagaaagca atcgatgc
//
LOCUS       DASFQS010000226          514 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.236, whole genome shotgun sequence.
ACCESSION   DASFQS010000226 DASFQS010000000
VERSION     DASFQS010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.236"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            142..402
                     /locus_tag="U1041_002296"
                     /pseudo
     CDS             142..402
                     /locus_tag="U1041_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108743.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
BASE COUNT          201 a           79 c           92 g          142 t
ORIGIN      
        1 aagttacacg ttactaaagg gaatggagat aaattattag atatactact gacagcttcc
       61 aagaagctaa agaggtccct agcgcctacg gggaatttgt attgataagg ggtacaaatt
      121 cccactaagc gctcgggacc ccttgtagga aaatgtccta agtgtggcaa caatattgta
      181 ttaaaaaaat cgttttatgg ttgttcaaat tatcctgaat gtaagtttac tttagctgaa
      241 cattttagaa agaaaaaact aaccaaaacg aatgtaaaag aattactgga gggaaaagaa
      301 accctggtaa aaggaatcaa aaacaaagag aaaaagccct acaatgccgt tgtaaaaatt
      361 ggggaaaagg gatatattga ttttatctct ttctcaaaat aaacataaaa gccctttaaa
      421 gagggctttt atatattaat cacaaatcac ttatcacaaa tcacaagtga ttaatcacaa
      481 atcacttgtg atttgtgatt cttaatgata caat
//
LOCUS       DASFQS010000227          493 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.237, whole genome shotgun sequence.
ACCESSION   DASFQS010000227 DASFQS010000000
VERSION     DASFQS010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.237"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>493
                     /locus_tag="U1041_002297"
     CDS             <1..>493
                     /locus_tag="U1041_002297"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769364.1"
                     /translation="PADTVKATKPVSETPVAPSKPEVTSTASGDVVVTPPTDNVTNLD
                     ITFTPEGASQPVTVVVSKGENGIWTAPADSGLVVNPDGTITIPAEKVADGTAVTVVAE
                     NGSVSSPEVGSTVVPVPAVTPETPVAPSKPEVTATDSGAVVVTPPTDNVTNLDITFTP
                     EGS"
BASE COUNT          156 a          123 c          105 g          109 t
ORIGIN      
        1 agccagcaga tacagttaaa gctactaaac ctgtttcaga aacaccagtt gcaccaagca
       61 agccagaagt tacatcaaca gcttcaggtg atgtagtggt tacgccgcca actgacaatg
      121 taaccaacct tgacattacc ttcactccag aaggcgcaag ccaaccagtt actgtagttg
      181 taagtaaggg tgaaaatggc atatggacag caccagctga ttcaggtctt gttgtcaacc
      241 cagatggcac tattaccatc ccagctgaaa aagtagcaga tggcacagcc gtgacggtag
      301 tggctgagaa tggttctgta tcttcaccag aagtaggttc aacagttgtt cctgttccag
      361 cagtaactcc agaaacacca gttgcaccaa gcaagccaga agttacagca acagattcag
      421 gtgctgtagt tgttacacca ccaactgaca atgtaaccaa ccttgacatt accttcacac
      481 cagaaggttc aag
//
LOCUS       DASFQS010000228          445 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.238, whole genome shotgun sequence.
ACCESSION   DASFQS010000228 DASFQS010000000
VERSION     DASFQS010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.238"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>445
                     /locus_tag="U1041_002298"
     CDS             <1..>445
                     /locus_tag="U1041_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769365.1"
                     /translation="ATGLNARFELFTEDNRPVVIDGVSMKGTTSNADNSITFSNLPVG
                     IYILKETVVPTGGYRPTTELRDIKFAIQADGSLRLIDFDSNMVTVDVSQGATLEITVK
                     NFKFLEMSVQKLKKATGVSLAGVRLKITALDQTPAPNFKDVTWHQN"
BASE COUNT          138 a           91 c          104 g          112 t
ORIGIN      
        1 agcgactgga ttgaacgctc gatttgaact ctttacagag gataatcgac ctgtggtcat
       61 tgatggtgtt agcatgaaag gcactaccag caatgcggac aatagtatta ccttctcgaa
      121 cctgccagtc ggtatttata tcttgaaaga gacagtcgtt ccgaccggtg gttatagacc
      181 aaccactgag ttgcgagaca ttaaattcgc aatccaagca gatggaagtc tgagactcat
      241 agactttgat tcgaatatgg taacggttga tgtgtcacaa ggggctaccc ttgagataac
      301 cgtcaagaac ttcaagttcc ttgagatgag cgttcaaaaa ctgaaaaaag cgacaggtgt
      361 cagtctggca ggcgttcgat tgaaaataac tgcactggat caaacacctg ctccaaactt
      421 taaagatgtg acatggcatc aaaat
//
LOCUS       DASFQS010000229          443 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.239, whole genome shotgun sequence.
ACCESSION   DASFQS010000229 DASFQS010000000
VERSION     DASFQS010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.239"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>443
                     /locus_tag="U1041_002299"
     CDS             <1..>443
                     /locus_tag="U1041_002299"
                     /inference="COORDINATES: protein motif:HMM:TIGR01443.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000211617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769366.1"
                     /translation="PQIMQVPIPKTYEKETKENFYWGIIDEVLTKGFSGPVYSLAVEK
                     YEHYIADGIVTHNCLYGWKQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIPLMAY
                     PIQNSSMRGTIVLDPFLGSGSTLMAADQTGRVCYGIELDEKFVDV"
BASE COUNT          138 a           85 c           92 g          128 t
ORIGIN      
        1 cctcaaatta tgcaagttcc aattccaaaa acttatgaaa aggaaacgaa agaaaatttt
       61 tactggggca taattgatga ggttcttaca aaaggattca gtggacctgt ttattctctt
      121 gctgttgaaa aatatgaaca ttatattgca gatggaattg ttactcataa ctgtctttat
      181 ggctggaaac aaaagggaaa acatcaatgg ttcagcgacc gtaaacagac aaccatttgg
      241 gaatatgacc gccctaaatc cagtaaggac catccaacga tgaaacccat tccgctcatg
      301 gcctatccta ttcaaaattc atctatgcgt gggacgattg ttcttgatcc attccttggt
      361 tctggttcaa ccctaatggc cgcagaccaa acaggtcggg tttgttacgg tattgagttg
      421 gatgagaagt ttgtggatgt cat
//
LOCUS       DASFQS010000230          438 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.240, whole genome shotgun sequence.
ACCESSION   DASFQS010000230 DASFQS010000000
VERSION     DASFQS010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.240"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>438
                     /locus_tag="U1041_002300"
     CDS             <1..>438
                     /locus_tag="U1041_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HEM4769367.1"
                     /translation="QALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNAPIDYVA
                     LKGRDCYAGLDLSSTSDITALVLVFPPRNSEENYIILPFFWLPEDTLELRCRRDHVLY
                     DVWERQGYIKTTEGNVVHYGFIEKFIEDLSEIYHIKEIAYDRW"
BASE COUNT          126 a           83 c           98 g          131 t
ORIGIN      
        1 aacaggcact tgataaccca gctgaagaga atgtctttaa gcagctccgt ctaaatatgt
       61 ggacaagttc aagtgttgct tggattccag aacatgttta tgcgaaaggc aatgccccaa
      121 ttgactatgt agctcttaaa ggtcgtgatt gttacgcagg gcttgactta tcgagcacat
      181 ctgacattac agccttagtc ttagtctttc cgccacggaa tagtgaggag aactacatta
      241 tcttaccttt cttttggtta ccagaggata cattggaact cagatgtcgt cgtgaccatg
      301 ttctgtatga tgtttgggag cgtcaaggtt acatcaaaac aacggagggt aatgtcgttc
      361 actacggttt tatcgaaaaa tttattgaag acttgtcaga aatctatcat atcaaggaaa
      421 tagcttatga ccgttgga
//
LOCUS       DASFQS010000231          434 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.241, whole genome shotgun sequence.
ACCESSION   DASFQS010000231 DASFQS010000000
VERSION     DASFQS010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.241"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>434)
                     /locus_tag="U1041_002301"
     CDS             complement(<1..>434)
                     /locus_tag="U1041_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000515884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM4769368.1"
                     /translation="YYGIARKFGLSVDALLAVNGLKKSDILKVGQTLKVNAASRTTTA
                     IPTSVASRVVASALSKVGQKVTVPSNPYGGQCVALVDKIVQELTDKNMSYTNAIDCLK
                     KAKSNGFQVIYDAWGVNPKAGDFYVIQTDGLVYGHIGVCVTDS"
BASE COUNT          129 a          110 c           77 g          118 t
ORIGIN      
        1 gaatccgtca cacagacacc aatgtgacca tataccaaac catccgtctg aataacataa
       61 aaatcacctg ctttgggatt cacaccccaa gcatcataga ttacttggaa accatttgat
      121 tttgctttct tcaaacaatc aatggcatta gtataggaca tattcttgtc cgttagctct
      181 tgaacaatct tatccaccaa ggcaacacac tgtccaccat aaggattaga tggaacggtt
      241 accttttgac cgaccttgga taatgctgac gcaaccacac gacttgcaac actggttgga
      301 atggccgttg ttgtccttga agcagcgtta accttgagtg tttgtccaac tttcaggata
      361 tccgacttct tcaagccatt taccgcaaga agggcatcta ctgatagacc aaacttccgg
      421 gcgattccat aata
//
LOCUS       DASFQS010000232          433 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.242, whole genome shotgun sequence.
ACCESSION   DASFQS010000232 DASFQS010000000
VERSION     DASFQS010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.242"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..198
                     /locus_tag="U1041_002302"
     CDS             <1..198
                     /locus_tag="U1041_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4314 domain-containing protein"
                     /protein_id="HEM4769369.1"
                     /translation="FNNLKAIYPVGTMVRLVKMDDPHPVPKGTLGTVIGVDDIGSLLV
                     KWENGSCLNVLYGIDIIEKVM"
     gene            200..430
                     /locus_tag="U1041_002303"
     CDS             200..430
                     /locus_tag="U1041_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769370.1"
                     /translation="MWEIMTRTVGDRHYVCEFLREDTTDPRNIDGAWIRILTIKRDGN
                     YIYQYRYGNELDNMDDIDRTVCQAVLDNFNEL"
BASE COUNT          146 a           68 c          100 g          119 t
ORIGIN      
        1 ttcaataacc taaaggcaat ctatccggtt ggcacaatgg ttagattagt aaaaatggat
       61 gacccacatc cagttcctaa aggaacactt ggtacagtta ttggagtgga tgacattggt
      121 tcactcttag ttaagtggga aaacggcagt tgcctaaatg ttttgtatgg aattgatatc
      181 atcgaaaagg taatgtgaga tgtgggaaat tatgactcga acggttggag acagacatta
      241 cgtttgtgaa tttctccgtg aagatacaac agacccaagg aatatagacg gtgcttggat
      301 tcgaatactg actatcaagc gagatggtaa ctatatttac caataccgat acggaaacga
      361 actagataac atggacgaca ttgatagaac agtttgtcag gctgtacttg ataactttaa
      421 tgaactgtaa gaa
//
LOCUS       DASFQS010000233          432 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.243, whole genome shotgun sequence.
ACCESSION   DASFQS010000233 DASFQS010000000
VERSION     DASFQS010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.243"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>432)
                     /locus_tag="U1041_002304"
     CDS             complement(<1..>432)
                     /locus_tag="U1041_002304"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769371.1"
                     /translation="PSVGGVVPPSVGGVVPPSVGGVVPPSVGGLTPPSVGGLTPPSVG
                     GLTPPSVGGLTPPSVGGVVPPSVGGVVPPSVGGFTPPSVGGLTPPSVGGFTPPSVGGV
                     VPPSVGGVVPPSVGGVVPPSVGGLTPPSVGGVVPPSVGGLTP"
BASE COUNT          123 a          150 c          124 g           35 t
ORIGIN      
        1 ggagttaatc cgccaacaga tggaggcacc accccaccga cggacggagg agttaatccg
       61 ccaacagacg gcggcaccac cccaccaaca gatggaggta ctaccccacc gacggacggc
      121 ggcaccaccc cgccaacaga cggaggagta aatccgccaa cggacggagg agttaatccg
      181 ccgacagacg gaggagtaaa tccgccaacg gacggcggca ccaccccacc aacagatgga
      241 ggcactaccc caccgacgga cggaggagtt aatccgccaa cggatggagg agttaatccg
      301 ccaacggatg gaggagttaa tccgccaaca gacggaggag ttaatccgcc aacggacggc
      361 ggcaccaccc caccgaccga cggcggcacc accccaccaa cagatggagg cactaccccg
      421 ccaacggacg gc
//
LOCUS       DASFQS010000234          424 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.244, whole genome shotgun sequence.
ACCESSION   DASFQS010000234 DASFQS010000000
VERSION     DASFQS010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.244"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>424)
                     /locus_tag="U1041_002305"
     CDS             complement(<1..>424)
                     /locus_tag="U1041_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HEM4769372.1"
                     /translation="QALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNDPIQYDS
                     LKGRSCYAGLDLSSTSDITAFVLVFPPRFEEEDYIVLPFFWLPEDTLELRCRRDHVLY
                     DVWERQGYIKTTEGNVVHYGFIEKFIESLSEIYHIKEIA"
BASE COUNT          127 a           97 c           77 g          123 t
ORIGIN      
        1 gctatctcct tgatatgata gatttccgat aggctttcaa taaacttttc gataaaacca
       61 tagtgaacaa cattaccctc tgtagtcttg atgtagccct gacgctccca aacatcatat
      121 agaacatggt cacgtcgaca tctcagttcc agtgtatcct caggtagcca gaaaaatggc
      181 agaacgatat aatcctcttc ttcaaatcta ggagggaaca ccaagacaaa agctgttata
      241 tctgacgtac tagaaaggtc taaacctgca taacaactac gacccttgag gctatcatat
      301 tggataggat catttccctt cgcataaaca tgttctggga tccaagcaac acttgagctt
      361 gtccacatat ttagtcggag ttgcttaaag acattttctt ctgctgggtt atcaagtgcc
      421 tgtt
//
LOCUS       DASFQS010000235          418 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.245, whole genome shotgun sequence.
ACCESSION   DASFQS010000235 DASFQS010000000
VERSION     DASFQS010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.245"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>418
                     /locus_tag="U1041_002306"
     CDS             <1..>418
                     /locus_tag="U1041_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769373.1"
                     /translation="FAVSVDNGPVTVYDLSKEKLPQNILEALVDDRVIKWAFNASFER
                     VCLSNWLKKYRPELLSFGFLSPVSWRCSMIWSAYLGLPLSLEGVGTVLKLKNQKIREG
                     ADLIRYFCLPCKQTKINGGRTRNLTHHAPDKWSTFI"
BASE COUNT          120 a           88 c           90 g          120 t
ORIGIN      
        1 tgtttgcggt atctgtcgat aatggaccag tgactgttta cgacttaagt aaagagaagt
       61 taccacaaaa tattcttgaa gctttagtag acgatagagt catcaaatgg gcattcaacg
      121 cttcatttga gcgagtttgt ctatcaaact ggctcaagaa atatcgcccc gaattgttat
      181 catttggatt tttatctcca gtttcatgga ggtgtagcat gatttggtcc gcttatttag
      241 gacttccact ctcccttgaa ggagttggaa cggttctcaa actcaaaaac caaaagataa
      301 gggagggagc tgacctcatt cgctacttct gcttaccttg taagcagacg aaaataaacg
      361 gtggacggac acgtaacctc acacatcacg cgcctgacaa gtggtctacc tttatcga
//
LOCUS       DASFQS010000236          402 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.246, whole genome shotgun sequence.
ACCESSION   DASFQS010000236 DASFQS010000000
VERSION     DASFQS010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.246"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            203..>402
                     /locus_tag="U1041_002307"
     CDS             203..>402
                     /locus_tag="U1041_002307"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769374.1"
                     /translation="MKYSEKALSMLEEAISGKLEDFWDFSFDFNALLGEDEEFAEGWD
                     KENPEMFDLFCDYEFFMFLEEH"
BASE COUNT          132 a           62 c           94 g          114 t
ORIGIN      
        1 gagcgtatga gacgcaaaaa cggaacgttc gtatacaact atgagacagt tagaactgct
       61 ttttctctac ctcctaacta tgtatcagag cagaatggca gacttgcaag gtactataac
      121 agtattctct atatcacaga acctgatacg ggtattgtag taacaatgat gaagacaaga
      181 cgaatgaaag gatttgcacc gtatgaagta cagtgaaaaa gcattatcta tgctagaaga
      241 ggcgattagt ggtaaacttg aagatttttg ggacttttca tttgatttca atgccttact
      301 gggggaagat gaagagttcg cggaggggtg ggacaaagaa aatcctgaaa tgttcgattt
      361 attttgtgat tatgaattct tcatgttcct tgaagaacac ga
//
LOCUS       DASFQS010000237          402 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.247, whole genome shotgun sequence.
ACCESSION   DASFQS010000237 DASFQS010000000
VERSION     DASFQS010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.247"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..315)
                     /locus_tag="U1041_002308"
     CDS             complement(<1..315)
                     /locus_tag="U1041_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM4769375.1"
                     /translation="MQFTLSHSRQTGVQTTIVYSNQVTITDEISLQTVAQFDHVAGLF
                     LNNTRSNANFIKSDVLVMDIDNDHSENPDEWMTVERLKEIFADYNFALVTSRSHMQAK
                     AGK"
BASE COUNT          116 a           80 c           66 g          140 t
ORIGIN      
        1 ttttcctgcc tttgcctgca tatgacttcg actagttacc aaggcaaaat tgtaatccgc
       61 aaagatttct tttaatcgct cgaccgtcat ccattcatct ggattttcag aatggtcatt
      121 atcaatatcc atgaccaaaa cgtccgactt aatgaaattt gcatttgagc gtgtattgtt
      181 taaaaacagc cctgccacat ggtcaaattg cgcaacagtt tgtagcgata tttcatcagt
      241 aatagttact tgattggaat agacaatggt tgtctgaacc ccagtctgtc ttgaatgaga
      301 taaggtaaat tgcattatgt gccctccata tttttgcagt aattttagaa atatatcttc
      361 ttaacttact aagtaagaat ctgacaaatt tttccgctct tt
//
LOCUS       DASFQS010000238          394 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.248, whole genome shotgun sequence.
ACCESSION   DASFQS010000238 DASFQS010000000
VERSION     DASFQS010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.248"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>394
                     /locus_tag="U1041_002309"
     CDS             <1..>394
                     /locus_tag="U1041_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000208945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HEM4769376.1"
                     /translation="SINGSTPKYSASLIIPKEDTVTINKIKAAIEQAYKEGESKLKGN
                     GKSVPALSTLKTPLRDGDLERPDDEAYKNAYFVNANSPHKPGVVDGNRQEIIDTSELY
                     SGIYGRASITFYAFNSNGNKGIACGLNNL"
BASE COUNT          124 a           90 c           74 g          106 t
ORIGIN      
        1 tcgattaacg gtagcactcc aaagtacagt gcctcactca tcatcccaaa agaagatacc
       61 gtaaccatta acaaaatcaa ggctgctatt gagcaagcat acaaagaagg tgagtctaaa
      121 ctcaaaggca atggcaaatc tgtacctgca ttatctactc tgaaaactcc acttcgtgac
      181 ggagaccttg aacgcccgga cgatgaagca tacaaaaatg cttacttcgt aaatgctaac
      241 tctccacaca aacctggtgt ggttgatggt aatcgtcaag aaatcattga tacttccgaa
      301 ttgtactctg gtatctatgg tcgcgcttct atcaccttct atgctttcaa ttcgaatggt
      361 aataaaggta ttgcttgcgg tttgaataac ttgc
//
LOCUS       DASFQS010000239          377 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.249, whole genome shotgun sequence.
ACCESSION   DASFQS010000239 DASFQS010000000
VERSION     DASFQS010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.249"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..353)
                     /locus_tag="U1041_002310"
     CDS             complement(<1..353)
                     /locus_tag="U1041_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769377.1"
                     /translation="MPIRELSIDIETYCEIDLRKSGVYRYAEDNSFEILLFAVSVDNG
                     PVTVYDLTKEKLPQDILEALVDDRVIKWAFNASFERICLSNWLKKYQPKLLSDEFLSP
                     VSWRCSMIWSAYLGLP"
BASE COUNT          118 a           73 c           70 g          116 t
ORIGIN      
        1 gggagtccta aataggcgga ccaaatcatg ctacatctcc atgaaactgg agataaaaat
       61 tcatctgata acaatttggg ttgatatttc ttgagccagt ttgatagaca aattcgttca
      121 aatgaagcgt tgaatgccca tttgatgact ctatcgtcta ctaaagcttc aagaatatct
      181 tgtggtaact tctccttagt taagtcgtaa acagttactg gtccattatc gacagatacc
      241 gcaaataaaa ggatttcaaa actgttatcc tccgcatagc gatagacacc cgattttcgt
      301 aagtcaattt cacaataagt ttcgatgtca atgctgagtt ctctaattgg catagtacgt
      361 cctttctgaa aaaggtg
//
LOCUS       DASFQS010000240          374 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.250, whole genome shotgun sequence.
ACCESSION   DASFQS010000240 DASFQS010000000
VERSION     DASFQS010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.250"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..362
                     /locus_tag="U1041_002311"
     CDS             <1..362
                     /locus_tag="U1041_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013990282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4769378.1"
                     /translation="KWTTTAKAVIVDPVTGQVIIPGSAIKPGTVVTAYSKDMAGNVSD
                     LNSAEVEAVDANNPAAGVKVKSVTSTSNANKSTKKAKQLPNTGEKATSATSLGLAVLG
                     MGLALFAAKRKKDEEEA"
BASE COUNT          135 a           67 c           80 g           92 t
ORIGIN      
        1 gtaaatggac aacaactgct aaagctgtga ttgtagatcc tgttactggt caagttatca
       61 ttccaggttc tgctatcaag ccaggaacag ttgtgacagc ttactctaaa gatatggctg
      121 gaaatgtttc agacttgaat tcggcagaag ttgaagcagt agatgcaaat aatcctgcag
      181 caggagtgaa agtgaaatca gttacttcta cttcaaatgc caacaagtca actaagaaag
      241 ctaagcaatt gccaaataca ggtgaaaaag caacttcagc aacttcactt ggattagcag
      301 ttcttggaat gggattagca cttttcgcag caaagagaaa aaaagacgaa gaagaagctt
      361 aaaataagcc attc
//
LOCUS       DASFQS010000241          373 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.251, whole genome shotgun sequence.
ACCESSION   DASFQS010000241 DASFQS010000000
VERSION     DASFQS010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.251"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..>373
                     /locus_tag="U1041_002312"
     CDS             <1..>373
                     /locus_tag="U1041_002312"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769379.1"
                     /translation="TEIIPTENKAKVTVNYYILGTSTPLQPSYEDTPATKISETVTTN
                     TYYLDANNERVPVGDPAVVINPVDPAVSYNTTLTKADGTAERPTTLESGGKTYHLVEA
                     ATTFTEGTGVSGTLTKDTVVNY"
BASE COUNT          123 a           89 c           79 g           82 t
ORIGIN      
        1 actgaaataa tccctacaga gaacaaagcc aaggtaactg taaattacta tatcttgggt
       61 acaagcacac ctcttcaacc aagctatgaa gatactccag ctactaagat ttcggagacg
      121 gtaacaacca acacctatta tctagatgcc aataatgagc gtgtgccagt aggtgatccg
      181 gctgtagtaa tcaatccagt tgatccagcg gtgtcttata atacaaccct cactaaggca
      241 gatggtacag cagaacgtcc aactacactt gagtcaggtg gcaagaccta ccacttggta
      301 gaggcagcga caaccttcac ggaaggtaca ggcgtcagcg gaaccttgac caaggataca
      361 gttgtaaatt act
//
LOCUS       DASFQS010000242          368 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.252, whole genome shotgun sequence.
ACCESSION   DASFQS010000242 DASFQS010000000
VERSION     DASFQS010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.252"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(44..>368)
                     /locus_tag="U1041_002313"
     CDS             complement(44..>368)
                     /locus_tag="U1041_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769380.1"
                     /translation="GLLTKNHTAQTIEVAYEGYPEYTGELLKKHFKSSKEIRALLQKG
                     DIIQLEDSLDKIEHDELQRNAQQHRFIGSLSQLAEDTLADYIYLFQESDRTWYLLEEG
                     EMKTI"
BASE COUNT           95 a           76 c           63 g          134 t
ORIGIN      
        1 agtacgaaaa aagcacctca attgaagtgc ttttcgttta ttcttagatg gttttcatct
       61 ctccttcttc aagaagatac catgttctat cactttcttg aaaaagataa atgtaatctg
      121 ccaaggtatc ctctgccaat tggctaaggc taccgatgaa acgatgttgc tgggcattcc
      181 tctgtaactc atcgtgttcg atcttatcaa gactatcttc aagctgaatg atatcccctt
      241 tctgaagtaa tgcacgaatt tctttgcttg atttaaagtg tttctttaga agttccccag
      301 tgtattctgg atatccttca tacgctacct cgattgtttg tgctgtatgg tttttagtca
      361 ataatcca
//
LOCUS       DASFQS010000243          359 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.253, whole genome shotgun sequence.
ACCESSION   DASFQS010000243 DASFQS010000000
VERSION     DASFQS010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.253"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(<1..>359)
                     /locus_tag="U1041_002314"
     CDS             complement(<1..>359)
                     /locus_tag="U1041_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000515884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
                     /protein_id="HEM4769381.1"
                     /translation="VNTKLGITEAGKVRELAKLMSKYSGQQIDFITEQNVYDYRSITS
                     IGKGYDSITELHFNAFNGSAKGTEVLIQSSLEADKEDMAILSLLSRHFQNRGIKKVDW
                     LYNANQAASRGYTYRLV"
BASE COUNT          100 a           79 c           65 g          115 t
ORIGIN      
        1 tccaccaaac gataggtgta tccacgactt gctgcttggt tggcattata gagccaatct
       61 accttcttaa tgccacgatt ttggaaatga cgtgaaagaa gagataggat tgccatgtct
      121 tccttatctg cttctaagga ggattgaatc aagacttctg tccccttggc actaccatta
      181 aaggcattga agtgcaattc agtaatcgag tcgtagccct taccaatact agtaatactc
      241 cgataatcat aaacattttg ttcggtaata aaatcaatct gttgtccact gtacttagac
      301 attaacttgg ctaattctcg aacctttcct gcttctgtga tacctagttt ggtattcac
//
LOCUS       DASFQS010000244          346 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.254, whole genome shotgun sequence.
ACCESSION   DASFQS010000244 DASFQS010000000
VERSION     DASFQS010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.254"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            147..>346
                     /locus_tag="U1041_002315"
     CDS             147..>346
                     /locus_tag="U1041_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000877753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769382.1"
                     /translation="MKYSQKVLDMLEQAVSGQLEDFWDFSFDFNALFGEDEEFADAWE
                     SENPEMFDMLNDYDLMMFLEEH"
BASE COUNT          107 a           51 c           80 g          108 t
ORIGIN      
        1 gctttttctc tgcctcctaa ctatgtatca gatagagatg gtcgagatgt cagatattat
       61 aaccatcttt tgtacatcac ggagcctcaa agcgacattg tggttactat gatgaaacgt
      121 aaaaatatga aaggatttac cccaaaatga aatacagtca aaaagtttta gatatgttgg
      181 aacaagcggt aagcggacag cttgaagatt tttgggattt ttcatttgac ttcaatgctt
      241 tgttcggtga ggatgaagag tttgcggatg catgggaatc ggaaaatcct gaaatgtttg
      301 atatgctgaa cgattacgat ttgatgatgt tccttgagga gcataa
//
LOCUS       DASFQS010000245          343 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.255, whole genome shotgun sequence.
ACCESSION   DASFQS010000245 DASFQS010000000
VERSION     DASFQS010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.255"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
BASE COUNT          105 a           60 c           73 g          105 t
ORIGIN      
        1 ctcttaagat attaaaaagt tttcagaaaa ttacgtcaaa agtgttgaca aagtgatttt
       61 gataccgtat aatcatctgt aatcagaaga agtagtaaag cagaagtctt cagggagcct
      121 gtggtactgg gaacgggtgg cggagtttta tgaaatgggc tgatgtgcat ttatgtctat
      181 tttatgacgt cgttagtcgg tcttgccgta ccaccagtac tgccttcact cgactgctag
      241 tcctaaaatg ccctaaattc acaatgattg tttgctgtaa cttactttga gtaatcagcc
      301 aaaacagtct acgcaaatga acttaaaaca atgatagttc ggt
//
LOCUS       DASFQS010000246          342 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.denovo.256, whole genome shotgun sequence.
ACCESSION   DASFQS010000246 DASFQS010000000
VERSION     DASFQS010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.denovo.256"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
BASE COUNT          100 a           72 c           61 g          109 t
ORIGIN      
        1 tttttttcaa gcggtattgg ccgtttagtt cgttttagtt gtagaggtca gacttggaat
       61 gtgaaacacg aattgctgtg atttgcttcg caaatcttat ctccaacctt tttacctcga
      121 ttttttcatt tctaagctca ggctgaaaca gttcactgaa cagtttcact ccactggcct
      181 gttaaaccca atcaaccact gcactgagaa gtgactttgg actttttgac cagcctcatt
      241 taaagttgaa aataaggaaa cgaagtttcc tcgcttgtcg aagtaagcta agataaacta
      301 acatgactat aaaaaacaac tgccattccc ttgagaatag ca
//
LOCUS       DASFQS010000247        16708 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.051, whole genome shotgun sequence.
ACCESSION   DASFQS010000247 DASFQS010000000
VERSION     DASFQS010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16708
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.051"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..1471
                     /locus_tag="U1041_002316"
     CDS             <1..1471
                     /locus_tag="U1041_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000167702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4769383.1"
                     /translation="SYSQLSEAPKTLQAALSKQKIQPKGAFQVFMPEDPQFFFESYVT
                     KGENITIVTPMTVLETMLNSGKSYENVAYQVDFGQAYETNTVTNFVPKVTPHKSNTNQ
                     EGISIDGKTVLPNTVNYYKIVLDYSQYKDMVVTDDVLAKGFYMVDDYPEEALTLNPDG
                     IQVLDKDGNRVSGISVSTYASLSEAPKVVQDAMAKRQFTPKGAIQVLSSDEPKTFYET
                     YVKTGQTLVVTLPMTVKNELTKTGGQYENTAYQIDFGLAYVTETVVNNVPKLDPQKDV
                     VIDLSHKDESLDGKEVALYQTFNYRLVGALIPSNRATDLFEYGFEDNYDEKHDEYNGV
                     YRSYLMTDVILKDGSVLKEGTEVTKYTLQQVDTENGLVSISFDKSFLETISDDSAFQA
                     DVYLQMKRIATGQVENTYLYTVNGYVISSNTVVTHTPQPEEPSPNQPTPPQPPIETIE
                     PPVPANILPNTGEQESLLGLIGAGILLGTAYGLKKKEEK"
     gene            1472..1663
                     /locus_tag="U1041_002317"
     CDS             1472..1663
                     /locus_tag="U1041_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEM4769384.1"
                     /translation="MNPKTIYEKDSDQDGLTDAQELALGTNPQSVDTDGDGQADLEEL
                     QSGHSPLVPQKELCDGLEL"
     gene            1647..2198
                     /locus_tag="U1041_002318"
     CDS             1647..2198
                     /locus_tag="U1041_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769385.1"
                     /translation="MAWNFDTMKEALSEMEKVDYQEFIKAFLSLELSISDRTILNQVY
                     QDYMDEDDLSLISDELRVKVDSYQDEVQADMTDILEKLYRTGEGSNFIMDLMSSNSLS
                     DTLEQYEVLDSDDYSLLSLETLQAMIQQDLAISSQDYFGDLVHLALQKDLLDQKSHFL
                     QHYVATVMDGIPQERDQRALVLD"
     gene            2248..7725
                     /locus_tag="U1041_002319"
     CDS             2248..7725
                     /locus_tag="U1041_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001890950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEM4769386.1"
                     /translation="MNQEVLLQMMRATIPRDRALLEAFLYYQAEHFDEEWDSLVYQFM
                     TNRQEFKRPVQVLHFETDVSAFVQASPYDTAHDLLTYTQVFGQTGLQKLDKLSTSEKD
                     LVIEVALFNLATRFQLLDSNGHYQTISPDSLLQKSRGANLVNVYRVANNLAERISRDI
                     EQFLLTYEPELETRVEETVQEKEETVDEHKTSVHQAISFREEGSLVIASLDVDLSQLD
                     IRTGKTSHLPAYEELSLRRKFEILTYFDQIRNERSKLPNLRRGDFDTEMEKTPIFDGE
                     ELLTYLEADGSLYELKRTLTTVEEKELEKIGQAIRTENQEKLTQVGIDLSQFDSDQIG
                     ILLDAAGRFHLKNADLALLGGYPNASVTQLALATELLQMGLSHEKIEFFFGSQLSIEE
                     LRQVAYAFLHQELSIEDAEQFEKDKGNQPDLTLRDWKNKLEKAEGKEVVDEAFEVNPL
                     VQMVLDTFPLGSLVSYKGQDFEVVSVSDARLNGLIRIELVNDFSDIIEQNPVLYLRTW
                     EEVSQALHQPKAEPQTELDDEDQELNLFSFLEEETSQSVNEAVQNIGVLDPEQSGEAS
                     HDSEKPTIYVPEEVLVESIPDIPATAFYFPEDMTDFYPKTARDKVETNIAAIRLVKTL
                     ETERRQASTSEQELLAKYVGWGGLANDFFDDYSPKFSKEREELKSLVTDKEYSDMKQS
                     SLTAYYTDPALIRQMWDKLERDGFTGGKILDPSMGTGNFFAAMPKHLREKSELYGVEL
                     DTITGAIAKHLHPNSHIEIKGFETVAFNDNSFDLVISNVPFANIRIADNRYDKPYMIH
                     DYFVKKSLDLVHDGGQVAIISSTGTMDKRTENILQDIRETTEFLGGVRLPDSAFKAIA
                     GTSVTTDMLFFQKNLDKGYVADDLAFSGSIRYEKDSRIWLNPYFDGEYNNQVLGTYEV
                     RNFNGGTLSVKGTSDDLIASVETALHQVKAPRKIDRNEVIINPDVLTKQVIDTSIPAE
                     MRENLGQYSFGYQDSTVYYRDNKGIRVGTKTEEISYYVDEEGNFKAWDTKHSQKQIDR
                     FNALEVTDNTALDVYVTDDAAKRGQFKGYYKKTVFYEAPLSDKEVARIKGMVNIRNAY
                     QEVIAIQRYYDYDKETFNHLLGKLNRTYDSFVKHYGYLNSAVNRNLFDSDDKYSLLAS
                     LEDERLDPSGKSVIYTKSLAFEKALVRPEKEVKKVHTALDALNSSLADGRGVDFAYMM
                     SIYQVESQMTLIEELGDLIMPDPEKYLNGELTYVSRQDFLSGDVVSKLEVVDLLVKQD
                     NRDFNWTHYAGLLEAVKPARITLADIDYRIGSRWIPLSVYGKFAQETFMGKAYELSDQ
                     EVATVLEVSPIDGVITYQSKFAYTYSNATDRSLGVPASRYDSGRKIFENLLNSNQPTI
                     TKQVVEGDKKKNVTDVEKTTVLRAKETHLQELFQDFVARYPEVQQIIEDTYNSLYNRT
                     VSKTYDGSHLTIDGLAQNISLRPHQKNAIQRIVEEKRALLAHEVGSGKTLTMLGAGFK
                     LKELGMVNKPLYVVPSSLTAQFGQEIMKFFPIKKVYVTTKKDFAKAKRKQFVSRIITG
                     DYDAIVIGDSQFEKIPMSREKQVTYINDKIEQLREIKLGSDSDYTVKEAERSIKGLEH
                     QLKELQKLERDTFIEFENLGIDFLFVDEAHHFKNIRPITGLGNVAGITNTTSKKNVDM
                     EMKVRQVQAEHGDRNVVFATGTPVSNSISELFTMMNYIQPDVLERYQVSNFDSWVGAF
                     GNIENSMELAPTGDKYQPKKRFKKFVNLPELMRIYKETADIQTSDMLDLPVPEAKIIA
                     VESELTQAQKYYLEELVERSDAIKSGSVDPSRDNMLKIVRC"
     gene            8223..10001
                     /locus_tag="U1041_002320"
     CDS             8223..10001
                     /locus_tag="U1041_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012678622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HEM4769387.1"
                     /translation="MRTAKTILTVIHERGKQDKPLERVYKLLFNRELYLIAYAKLYPN
                     NGAMTKGVTEETIDGMSIQKIDRIIEQLRRETYYWRPARREYIPKKNGKHRPLGIPVW
                     SDKLLQEVIRMILEAYYEPQFSEHSHGFRPKRGCHTALQEIQTWKGTRWFIEGDISSY
                     FDTIDHDVLITMLSRQIQDGRFIRLIKNMLEAGYLDDWKFHKTISGTPQGGVISPLLA
                     NIYLHQFDKWVGEELIPQYTRGKKQKANSAYNRLSRRIKCYQDKGDYKKAHQLIVERR
                     NLPSVDTYDTSYRRLRYVRYADDFILGFTGSKAEAKAIKKQIGDFLNTKLSLELSQEK
                     TLITHATGESAKFLGYEIKAQRVNDYIDNKGRRSANGVIALFVPASVIESKCRQYMKN
                     GKAIHRNNLLQDDDFSIVQTYQQEYRGLVQYYILAQNLSWFSKVYWYMETSLLKTLAF
                     KHKSSINKMLAKYKTTTTSTNGRTVPCLQVVVPREDKPPLVATWGGISLSYKKKTVIE
                     DAPYQVYGGRTELIKRLLANKCELCGSEENIEVHHIRKLADLNKHNGKLVPKWKEVMS
                     ARRRKTLVTCRDCHHAIHNGSINTRL"
     gene            10094..10606
                     /locus_tag="U1041_002321"
                     /pseudo
     CDS             10094..10606
                     /locus_tag="U1041_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636627.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            10587..10961
                     /locus_tag="U1041_002322"
     CDS             10587..10961
                     /locus_tag="U1041_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
                     /protein_id="HEM4769388.1"
                     /translation="MAKSLFEEMGGKYERQGDYLIPCLTVPAEEEQPIGIWGQRHLDY
                     LKHHCKVTYTNLLTSGRLNAYLADIDRQAQERFERLIEGMKQAQGITEQLKAENALEW
                     TGCLNNIRACAREIVEKEIIFA"
     gene            11328..13247
                     /gene="tet(O)"
                     /locus_tag="U1041_002323"
     CDS             11328..13247
                     /gene="tet(O)"
                     /locus_tag="U1041_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HEM4769389.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAK
                     DGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLPMVYREMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGIRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEERQRLAYVRLYGGILH
                     LRDSVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLP
                     QRERIENPLPLLQTTVEPSKPQQREMLLDALLEISDSDPLLQYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEVEIKESTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTYFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            13299..13472
                     /locus_tag="U1041_002324"
     CDS             13299..13472
                     /locus_tag="U1041_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HEM4769390.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            13961..14473
                     /locus_tag="U1041_002325"
     CDS             13961..14473
                     /locus_tag="U1041_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007392094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4769391.1"
                     /translation="MVKYAPRKVYIRESGGYVELSYTEFCRCRESDQTYMDKLFIPIQ
                     GCLLEVVREQYTDFYRDKERWRYLQKLDTKNRLLSLDGFTDSEGNPLDFITDEAVDIA
                     ETVVNAVMVDRLKAALPLLSDSEQELIQAIFFDGLSEREVGARLGITQSVVNKRKARI
                     LIKLRKIIEN"
     gene            14568..14993
                     /locus_tag="U1041_002326"
     CDS             14568..14993
                     /locus_tag="U1041_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4769392.1"
                     /translation="MAYNHGREDRKWRIWKEAEEKLLRECGVDEATIEQIRMADRADF
                     NSNRRFYRWTNDVAEYLEDMAGRERQAEVGTVAELLEEIESENLYQVLVTVDGRTLKI
                     VLLKMQGYSTKEIAPLVHLTTGAIYARLDHLRKKLRKIL"
     gene            15077..15247
                     /locus_tag="U1041_002327"
     CDS             15077..15247
                     /locus_tag="U1041_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HEM4769393.1"
                     /translation="MAYRVKAYTLREESTESGTRYFISFKDGQGKSHELEVSEQFFME
                     FRQMERRNRNLF"
     gene            15704..>16708
                     /locus_tag="U1041_002328"
     CDS             15704..>16708
                     /locus_tag="U1041_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015521636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4769394.1"
                     /translation="MQKLQTVNAETLLYEPLEKPSFVVDSLIPTGLSLFCGSQKIGKS
                     WLMLKLCLCVSQGIPLWDMPTMEGDVLYLCLEDTFCRIQDRLFRLTDEASGRLHFAVA
                     SCKLSDGLIVQLEDYLKDYPDSRLIVIDTLQKVRTASKDNAYASDYGDISLIKDFADR
                     HSLAVIVVHHIRKQNDSDVFNKVSGTTGLTGSADATFVLEKEKRASDTAKLYVTGRDT
                     PYQEYTLRFRDCRWELVERKTQEQLAKETIPDVLFRLVDFMRDKEEWIGTATELLAAM
                     GETETIPTVITKWLNEYRTTFLSENRICYQYSRRKDGRRIALARRAGDSGDGGDSDIR
                     I"
BASE COUNT         5285 a         3068 c         3884 g         4471 t
ORIGIN      
        1 gtcttattct caattatcag aagctccgaa aacactacaa gcagcccttt cgaaacaaaa
       61 aattcagcct aaaggagctt ttcaagtttt catgcctgag gacccacaat tcttttttga
      121 atcttatgtg accaaggggg agaatattac cattgtcact ccgatgacgg ttttggaaac
      181 catgcttaat tcagggaagt cttatgaaaa cgtggcttat caggtggact ttgggcaagc
      241 ctatgaaacc aacacggtga ccaattttgt ccctaaagta actccacata agtctaatac
      301 caatcaagaa ggtatttcaa ttgatggaaa gactgttctt ccgaatacgg tcaattatta
      361 caaaattgtc ttggattaca gtcaatacaa ggacatggtc gtgacggatg atgttcttgc
      421 caagggattt tacatggtag acgattaccc agaagaagcc cttaccctaa atcctgatgg
      481 cattcaagtt ttggataagg atggcaatcg tgtatctggt atctctgtca gcacctacgc
      541 tagtttgtca gaagctccga aagttgttca agatgccatg gctaaacgtc agtttacacc
      601 taaaggagcc attcaagttc ttagtagcga tgaacccaaa accttttatg agacctatgt
      661 gaagactggt caaaccttag ttgtcacgct tccgatgacg gtaaaaaatg agttgaccaa
      721 aacaggtggt cagtatgaaa atacagccta tcagattgat tttggcttgg cctatgtcac
      781 ggaaacagtg gtcaataatg ttcccaaact agacccacaa aaagatgtgg tgattgactt
      841 gtctcataaa gatgagagcc ttgacgggaa agaagtggcc ttgtatcaaa cctttaacta
      901 tcgcttggtt ggagcattga ttccaagcaa tcgtgcgact gatttatttg aatatggttt
      961 tgaagataac tatgatgaaa agcatgatga gtataatggt gtttatcgca gctatctgat
     1021 gacggatgtc atcctcaaag atggttctgt cttaaaagag gggacagaag tcacgaaata
     1081 taccttgcaa caggtggata cagaaaatgg cctcgtgtca atttcatttg ataaatcctt
     1141 cttagagact atctctgatg attcagcctt tcaggcagat gtttacctgc agatgaaacg
     1201 gattgcgact ggtcaggtgg agaataccta cctttataca gtgaatggct atgtcatcag
     1261 ctcaaataca gttgtaacac atacacctca acctgaagaa ccaagtccaa atcaacccac
     1321 accacctcaa ccaccaattg agactattga accgcctgtt ccagcaaata ttttgccaaa
     1381 tacaggggaa caggaatccc ttttgggctt gattggagct ggtattctac ttggtacggc
     1441 ttatggactg aagaaaaagg aggagaagta gatgaatcca aaaactattt atgaaaagga
     1501 ttcagaccaa gatggtttga cagatgctca ggaactagct ttgggaacca atccgcagtc
     1561 tgttgacaca gatggtgatg gtcaagctga tttagaagag ctacaatctg gacattcacc
     1621 actagtccca caaaaggagt tgtgtgatgg cttggaactt tgacaccatg aaagaggctt
     1681 tgtctgaaat ggagaaggtc gattaccaag agtttatcaa ggcctttctc tctttggaat
     1741 taagtatttc tgatagaaca atcctcaatc aggtttatca agattatatg gatgaggatg
     1801 acctatcctt gattagtgat gagctacgag ttaaagttga tagttatcag gatgaagtac
     1861 aggcagatat gactgacatt ctggaaaagt tgtaccgaac aggtgaaggc tctaatttta
     1921 ttatggattt aatgtcctca aatagtcttt cagacacctt ggaacagtat gaggttttgg
     1981 atagtgacga ttattcacta cttagccttg aaaccttaca ggccatgatt caacaggact
     2041 tggctatttc tagtcaggat tattttggag atttggttca ccttgccttg caaaaagatt
     2101 tactagacca gaaaagtcat ttcttacaac actatgtggc aactgtaatg gatggtattc
     2161 cacaagaaag agaccaacga gccttggtcc tagattaaca caaagggctg agaaacactc
     2221 tcagcctttt taaaatggga gggaataatg aatcaagaag tcttactaca aatgatgaga
     2281 gcaaccattc ctcgtgatag agccttgctt gaagcgtttt tatattacca agcagagcat
     2341 tttgatgagg agtgggatag tctcgtttat cagtttatga ccaataggca ggaattcaaa
     2401 agacctgttc aggtacttca ctttgagaca gatgtttcag cttttgttca ggctagtcct
     2461 tatgatactg ctcatgatct attgacctat acacaagtat tcggccaaac tggtctccaa
     2521 aaacttgaca aactatcgac gtctgaaaaa gacttggtga ttgaagtggc cttgttcaat
     2581 ctggccactc gttttcaact attagactca aatggacact accaaactat ttcaccagat
     2641 tctctattac aaaagagtag gggagctaat ttggtcaatg tttatcgtgt ggctaataat
     2701 ttagcggaac gcattagccg agatattgaa cagtttctct tgacttacga gcctgagctt
     2761 gaaacgagag ttgaggaaac agttcaagaa aaagaagaaa ctgttgatga gcacaaaaca
     2821 agtgttcatc aagcaatatc ttttcgagaa gagggctccc tggttattgc tagtttggat
     2881 gtagatttgt ctcaactgga tatccgaact ggaaaaacca gtcatctacc agcttatgaa
     2941 gagttatctt tacgacgtaa atttgagatt ctaacctatt ttgaccagat tcgaaatgaa
     3001 cgttcaaaac ttccgaatct tagacgaggt gattttgata ctgagatgga aaagacacca
     3061 atctttgatg gcgaggagtt acttacctat ctagaggctg atggcagcct ctatgagctg
     3121 aaacggacac tgactacagt cgaagaaaag gaattagaaa aaattggaca agccattagg
     3181 acagaaaatc aagaaaaatt gactcaggta gggattgatt tatctcagtt tgactctgac
     3241 caaatcggta ttttattgga tgccgcaggt cgttttcatc tgaaaaatgc ggatcttgca
     3301 ttattaggtg gctatccaaa tgcctctgta actcaactag cccttgcgac agaactactc
     3361 caaatgggat tgagtcatga aaaaattgaa tttttctttg gtagtcagct ttccattgaa
     3421 gagctgcgac aagttgccta cgccttttta caccaagaac ttagcataga agacgcggag
     3481 caatttgaaa aagataaagg caatcagcca gatttaaccc tcagagattg gaagaacaag
     3541 ctagagaaag ctgagggaaa agaagtagtt gatgaagcgt ttgaggtaaa tccacttgtt
     3601 cagatggttt tggacacttt tcctcttggg tcattagttt cctacaaggg acaggacttt
     3661 gaggtcgttt cggtcagcga tgctcgattg aacggtttga ttcggattga gttagtcaat
     3721 gacttttcgg atatcattga acaaaatcca gttctttatt tgaggacctg ggaagaagtt
     3781 agtcaggcac ttcatcagcc aaaggcagaa ccacaaacag agttagacga tgaagaccaa
     3841 gaattaaacc ttttttcatt tctggaagag gaaacaagtc aatctgttaa tgaagctgtt
     3901 cagaacattg gagttttgga tccagaacaa tcgggagaag ctagtcatga cagtgaaaag
     3961 ccaaccattt atgtacctga agaagtgctt gtagaatcga ttccagatat tccagcaacg
     4021 gctttctact ttccagaaga tatgacggac ttttatccta agactgctag agataaggtt
     4081 gagacaaaca ttgcggctat tcggttggtt aaaacacttg aaacggaacg ccgtcaagca
     4141 agtacaagtg aacaagaact ccttgccaag tatgtgggct ggggtggact tgccaatgat
     4201 ttctttgatg actatagtcc aaaattttct aaggaacggg aagaactgaa aagcctagtc
     4261 acagataaag agtattcgga tatgaaacag tcctctctga cagcctatta tacagaccct
     4321 gcccttatcc gtcagatgtg ggataagttg gaaagagatg gctttacagg tggcaaaatc
     4381 ctagatcctt ccatgggaac agggaatttt tttgcggcta tgccaaaaca cttaagagaa
     4441 aagagtgagc tatatggcgt agagttagat actattacag gagctattgc caaacacctt
     4501 catcccaata gtcacattga aattaagggc tttgagacgg tggcttttaa cgacaatagt
     4561 tttgatttgg tgatttctaa tgtgcccttt gccaatatac gaattgcgga taataggtat
     4621 gataagccgt atatgattca tgactacttt gtcaaaaaat ctcttgattt agtccatgat
     4681 ggtgggcaag tagcgattat ctcttccaca ggaaccatgg ataagcgaac agaaaatatt
     4741 ttacaagata ttcgtgagac aactgaattt cttggtgggg ttcgactgcc tgattctgcc
     4801 tttaaggcca ttgcaggaac gagtgtcaca acggatatgt tattcttcca gaaaaactta
     4861 gacaagggat atgtggcaga cgacttagcc ttttcaggtt ccattcgtta tgaaaaggat
     4921 agtcgtattt ggctcaatcc ttactttgat ggagaataca ataaccaagt gctaggaacc
     4981 tacgaggtca gaaattttaa tggcggaaca ctttctgtta aggggactag tgatgacttg
     5041 attgcaagtg ttgaaacagc tctacatcaa gtaaaagccc caagaaagat tgatagaaat
     5101 gaggtcatca ttaacccaga tgtgttgacc aaacaagtca ttgatacctc cattccagct
     5161 gaaatgaggg agaatctagg tcagtacagt tttggttatc aggattctac ggtctactat
     5221 cgagataata aaggcattcg agtcggaacc aagacggaag aaatcagtta ctatgtcgat
     5281 gaagagggca acttcaaagc atgggacacc aagcattctc aaaagcagat tgatcgcttt
     5341 aatgccttag aagtgactga taacactgct ctggatgtct atgtgaccga tgatgcagca
     5401 aaacgtggtc agtttaaggg atattataaa aagacagttt tctatgaagc tccattgtct
     5461 gataaagaag tggcacgaat caaaggaatg gtcaatattc gcaatgccta ccaagaagtt
     5521 attgccattc aacgctatta tgactacgat aaggagacct ttaaccactt gttaggcaaa
     5581 ctcaatcgta cctatgatag ctttgtcaaa cactatgggt atttgaacag tgcagtgaac
     5641 cgcaatcttt ttgatagtga tgataagtat tcgcttcttg ctagtttgga agatgaacgt
     5701 ctggatccaa gtggaaagtc tgttatctat actaaatccc ttgcttttga gaaggcttta
     5761 gtgcgtcctg aaaaagaggt taaaaaggta catactgccc ttgatgcctt aaattccagc
     5821 ttggctgacg gacgaggtgt tgatttcgct tatatgatgt ctatctatca ggttgaatcg
     5881 cagatgacct tgattgagga gttaggtgac ctcattatgc ctgatcctga gaagtatttg
     5941 aatggagaat tgacttatgt ttctcgccaa gactttctgt ccggtgatgt cgttagcaag
     6001 ttagaagtgg tggacctact cgtcaaacaa gacaatcgtg actttaactg gacgcattat
     6061 gcaggacttc tagaagcggt taaaccagca cgtattacct tggcagacat agattatcgg
     6121 attggttcac gctggattcc cttgtctgtt tacggaaaat ttgcccaaga aacctttatg
     6181 gggaaagcct atgaactgtc agaccaagaa gtagcaacag tccttgaagt cagtcccatt
     6241 gacggggtta tcacttacca atctaagttt gcctacacct attccaacgc aacggatagg
     6301 agtttaggtg tccctgcttc acgctatgat agtggtcgaa aaatctttga aaacctcctg
     6361 aattccaatc aaccaacgat cacaaaacaa gttgtcgaag gggataagaa aaagaatgtg
     6421 acggatgtag agaaaacaac agtcctgcgt gccaaggaaa cgcacctaca agaactcttt
     6481 caagattttg tagcaaggta tccagaagtt caacagataa ttgaagacac ctataacagt
     6541 ctctataatc gtacagtatc aaagacctat gatggtagcc atttaaccat tgatggactt
     6601 gcccagaata tatccttacg tcctcaccaa aagaatgcca ttcaacgaat tgtcgaggaa
     6661 aaacgtgccc tactagctca tgaagttggt tcaggtaaaa cacttaccat gcttggggca
     6721 ggattcaaac tgaaagaact cggaatggta aataaaccac tttatgtggt gccgtctagt
     6781 ctgactgctc agtttggtca agaaatcatg aaattcttcc caatcaagaa agtctatgtg
     6841 accaccaaga aagattttgc caaagccaaa cgtaagcagt ttgtgtcccg tattattaca
     6901 ggggactatg atgccattgt cattggggat tcacaatttg agaagatacc gatgagtcgt
     6961 gaaaaacagg tcacctatat caatgacaaa attgagcaac tcagagaaat caagctagga
     7021 agtgatagtg attatacagt gaaagaagca gagcgttcga ttaagggact agaacaccag
     7081 ttgaaagaac tccaaaaact ggagcgagat acctttattg aatttgaaaa ccttggcatt
     7141 gattttctct ttgtggatga ggctcatcac ttcaagaata tccgaccaat cactggactt
     7201 gggaatgtcg cgggtatcac caataccact tcaaaaaaga acgtagacat ggaaatgaag
     7261 gtgagacagg ttcaggcaga gcatggcgat agaaatgttg tttttgcgac aggaacacca
     7321 gtctcaaact ccattagtga acttttcact atgatgaatt acattcaacc cgatgtcttg
     7381 gaacgatacc aggtatccaa ttttgactcc tgggttgggg cttttgggaa tatcgaaaac
     7441 tctatggaac tagccccgac aggagataaa taccaaccta agaaacggtt caagaaattt
     7501 gtcaaccttc ctgaactcat gcgaatttac aaggaaacag ctgatattca gacttcagat
     7561 atgcttgatt tacctgtacc tgaagctaag attattgcgg tggaaagcga gttaacgcaa
     7621 gctcagaaat actatttaga agaactggta gagcgttcag acgctatcaa gtcaggtagt
     7681 gttgatccaa gtagagataa catgcttaaa atcgtgcgct gttaagcgta aaaatgtatc
     7741 tccctcgcag agggatatta ttgaaagtaa ataataggaa caactaacta acctagcggg
     7801 gaaacccaaa ggggacaata gcatgttagt aaagcggata aggagtgagt tacaacgctt
     7861 tgatgtgccg caagttccgt aacctatggt taaggctaaa ctgcttgaac atcaattctg
     7921 actaggtgca aagcatcgcc catcggaaag taactgagac cgatgttact gtatattcgt
     7981 tgttgtgatt ttggacgaat aactttctac agtaaaagag catacgataa gtatgaataa
     8041 aggaatgagt gaggaaccta agggttacta gaacgtacat ttttaacgaa tagcaggatt
     8101 gcctaagagg ggagaccctt atggtaacgg agtcaccgta gtagtttgag caagggaaaa
     8161 ccttgtacat ggcgaagggt gacaggtaat ttcgattagt tagaaaggat taggtgcgtg
     8221 agatgcgtac agccaaaact attttaacag tcattcatga acgtggaaaa caagataaac
     8281 cacttgaaag ggtttataaa ttactattta atcgtgaatt gtatctaata gcctatgcaa
     8341 agttataccc gaataacgga gcaatgacaa agggtgttac agaggaaacg attgatggta
     8401 tgtctattca aaaaatagat aggattattg aacaattaag acgagaaacc tattactgga
     8461 gaccagctag gagagagtac attcctaaaa agaatggaaa acaccgtcct ttgggaatac
     8521 cagtatggag tgataaactt cttcaggaag tgattcgcat gatattagaa gcctattatg
     8581 agccacaatt tagtgaacat tctcatggtt ttagaccaaa aagagggtgt catacagctt
     8641 tacaagaaat tcagacttgg aaagggacac gttggttcat agaaggagat atctctagtt
     8701 attttgacac gattgaccac gatgtattaa tcactatgtt gtctagacaa attcaggatg
     8761 gtcggtttat taggcttatc aaaaatatgc ttgaggcagg atatcttgat gattggaagt
     8821 ttcacaagac tattagtgga acaccgcaag gtggagttat tagtccttta ttagctaata
     8881 tctatttaca tcaatttgat aagtgggtcg gtgaagaact gatacctcaa tatacaagag
     8941 gtaaaaagca gaaagcaaac tcagcctata atcgtttgag tagaagaatt aaatgctatc
     9001 aggataaagg agattataaa aaagctcatc agttaattgt tgagagaaga aatctccctt
     9061 cagttgatac ttatgatacc agctatcgga gattaagata tgttcggtat gcggatgact
     9121 ttattctagg ctttacaggt tcaaaagctg aggcaaaggc tataaagaag caaattggag
     9181 actttttaaa tactaagtta tctttggaac tttctcaaga aaagactttg attacccatg
     9241 cgactggaga atcagctaaa tttctgggat atgagataaa agcacaacgt gtcaatgatt
     9301 atattgataa caaagggaga cggagtgcca atggtgttat cgcattattt gtacctgcat
     9361 cagttattga aagcaaatgc cgccaataca tgaaaaatgg taaagctatt catcgtaata
     9421 acttattgca ggatgatgac tttagtatcg ttcaaactta ccaacaagaa tatagagggc
     9481 tggttcaata ttatatattg gcacaaaatt tgtcatggtt ctcaaaagtc tattggtata
     9541 tggaaacatc actccttaaa acattagcat ttaaacataa gtcatccatt aataaaatgt
     9601 tagctaaata taagactacc acaactagca cgaatggccg aactgtgccg tgtttacagg
     9661 tagttgtgcc tcgagaagat aaacctcctc tagttgcaac gtggggtggc atttcacttt
     9721 cttataaaaa gaaaactgta atagaagatg ctccgtatca agtttatggt ggtcgaacag
     9781 agcttatcaa gcgattactc gcaaataagt gtgagctatg tggaagtgag gagaacatag
     9841 aggtacatca tatcagaaaa ttagcagact tgaacaaaca caatgggaaa ttagttccaa
     9901 agtggaaaga agtcatgtca gcaagacgtc gaaaaacgct agtgacctgt cgggattgtc
     9961 accatgcgat acataatggt tcaataaata cacgtttatg aaatgaaatt actggagagc
    10021 cggatgatgc gaaagtatca tgtccggttc ggtgggggga taatggaaaa ggggtcgcaa
    10081 tgactacctc gctagtatcc taccctacac aggtgaagcc agaaaactag ccattgatat
    10141 gcggttgatt gaccgtgctt actccttatc ggataatcag aaaatccttc aagtcgttga
    10201 taatgtcgag cggatttacc gtgaaggagc tgaagacaaa gccactcaga tgattttctc
    10261 tgatattgga acgcctaaaa gtaaggaaga aggatttgat gtttacaatg aacttaagga
    10321 cttgcttgtc gatcgaggga taccaaaaga agaaattgcc tttgtgcatg atgccaatac
    10381 tgatgaaaag aaaaacttac tgtctagaaa ggtcaatagc ggagaagtac ggattctcat
    10441 ggcttctacg gaaaaaggtg gaactggtct aaacgtgcaa tcacgtatga aagctgtcca
    10501 ccacttagat gttccatggc gtccttctga tgtaggacgg attttgcgga cattcaaaat
    10561 aaaaaagaat gtggaggtaa cagacaatgg caaaatcatt atttgaggaa atgggcggca
    10621 aatacgaaag gcaaggcgat tatttaatac cgtgcttaac tgtacccgcc gaagaagaac
    10681 agccgatagg catctgggga cagcggcatt tggattatct gaagcatcac tgcaaagtta
    10741 catacaccaa tcttcttaca agcggcagac ttaacgctta ccttgccgac attgacagac
    10801 aggcacagga acgctttgaa aggctcatag agggtatgaa acaggcacag ggcataacgg
    10861 aacagctaaa ggcagaaaac gccttagaat ggacaggatg cctcaataac ataagggctt
    10921 gtgcgaggga gattgtggaa aaggaaatta tttttgcata aacagatgat tagtggcagg
    10981 gggaaatcct gccgcttttt ctgctttagt ttgtcagctt gacaaataaa gggttaagga
    11041 atataattag attcagtatt atacaaggag ttaataaata tgcggcaagg tattcttaaa
    11101 taaactgtca atttgatagt gggaacaaaa agtagcagtc ccgtttcact tttaatatgg
    11161 ggcttagttt tttgtaccca gtttaataat acttttatca tgtaatttta tatgcccgaa
    11221 aacatataag tgttttgggg ctattggagt tatttaccca gtgataggag tatttatcac
    11281 tgggtatttt tatgcccttt tttgggtgtt gataggagga aaatcacatg aaaataatta
    11341 acttaggcat tctggctcac gttgacgcag gaaagacaac attaacggaa agtttattgt
    11401 ataccagtgg tgcaattgca gaactaggga gcgtagatga aggcacaaca aggacagata
    11461 caatgaattt ggagcgtcaa aggggaatca ctatccagac agcagtgaca tcttttcagt
    11521 gggaggatgt aaaagtcaac attatagata cgccaggcca tatggatttt ttggcggaag
    11581 tatatcgttc attatcagtt ttagatgggg caattctact gatttctgca aaagatggcg
    11641 tacaagcaca aactcgtata ttatttcatg cacttaggaa aatggggatt cccacaatct
    11701 tttttatcaa taagattgac caaaatggga ttgatttgcc aatggtatat cgggaaatga
    11761 aagcaaagct ttcttcggaa attatagtga agcaaaaggt tgggcagcat ccccatataa
    11821 atgtaacgga caatgacgat atggaacagt gggatgcggt aattatggga aacgatgaac
    11881 tattagagaa atatatgtca gggaaaccgt ttaaaatgtc agaactggaa caggaagaaa
    11941 acaggagatt ccaaaacgga acgttatttc ccgtttatca cggaagcgct aaaaacaatc
    12001 tggggattcg gcagcttata gaagtaattg ccagtaaatt ttattcatca acgcctgaag
    12061 gtcaatctga actatgcggg caggttttta agattgaata ttcggaagaa agacaacgtc
    12121 ttgcatatgt acgcctttat ggcggaatcc tgcatttgcg ggattcggtt agaatatcgg
    12181 aaaaggaaaa aataaaaatt acagaaatgt atacttcaat aaatggtgaa ttatgtaaaa
    12241 ttgataaggc ttattccggg gaaattgtta ttttgcaaaa tgagtttttg aagctaaata
    12301 gtgttcttgg agatacaaag ctattgccac agagagagag aattgaaaat ccgctccctc
    12361 tgctgcaaac aactgttgaa ccgagcaaac ctcaacaaag ggaaatgtta cttgatgcac
    12421 ttttagaaat ctccgacagt gacccgcttc tacaatatta tgtggatact acaacgcatg
    12481 agattatact ttcttttttg gggaatgtgc agatggaagt catttgtgcc atccttgagg
    12541 aaaaatatca tgtggaggta gaaataaaag agtctactgt tatatatatg gaaagaccgc
    12601 ttagaaaagc agaatatacc atccacatag aagtcccgcc aaatcctttc tgggcttctg
    12661 tcgggttgtc catagagccg ctccctattg gaagcggagt gcagtatgaa agcagagttt
    12721 cacttggata tttaaatcaa tcgttccaaa atgcggttat ggagggggtt ctttatggct
    12781 gcgagcaggg gctgtatgga tggaaagtga cagactgtaa aatctgtttt gaatatggat
    12841 tgtattatag tcctgtaagt acccccgcag actttcggct gctttcccct atcgtattgg
    12901 agcaggcttt aaaaaaagca gggacagaac tattagagcc atatctccac tttgaaattt
    12961 atgcaccgca ggaatatctc tcacgggcgt atcatgatgc cccaaggtat tgtgcagata
    13021 ttgtaagtac tcagataaag aatgacgagg tcattctgaa aggagaaatc cctgctagat
    13081 gtattcaaga atacaggaac gatttaactt atttcacaaa tgggcaggga gtctgcttga
    13141 cagagttaaa aggataccag ccagctattg gtaaatttat ttgccaaccc cgccgcccga
    13201 atagccgtat agataaggtt cggcatatgt tccacaagtt agcttaacag cttgcaaaag
    13261 tcatataaaa tgagatttga aaggattaga gactaattat gatgaaatgc gaatggatat
    13321 tgtgtcctgt ttgtgggagc aaaacccgta ataaaattag gaaggacact gttttggaga
    13381 attatcccct ttattgtcca aaatgcagac aagaaagatt gattaaagtt gacaacttga
    13441 agataactgt catcaaagag ccagacgctt aagacgcaga gccgatgaaa ttgtggaaca
    13501 attcacgaat catcggctct ttttgtttcg tatttgaaag aacaaactca ccaaataaaa
    13561 aaaacgatat tcgggtgggt tattttgtta taccctaaat taccctctga atttgttttt
    13621 aaatttggag ggattttttt tatgtccttt tttcgggcag ttatctatct gctcatacga
    13681 agcaaaattt atcaatacat agcatatcag agaacggcag gaaaccagtt aaaaaaattt
    13741 ctgccagtgc aacggtactt ctcaccttga aagtagaagt acaatctcca tacaatagaa
    13801 ttactatttc ctataaccgt aaaggtcaca gagcctttgc ggtttttctt ttgtcgattt
    13861 ttgttggaaa gtgccgtagg gctgtttctg atatgcggtg tcgttctccg cctctccatc
    13921 tggatttttt acatttcaaa aattcagatg ggaggtattt atggtgaaat atgcaccaag
    13981 aaaggtatat atcagagaaa gtggcggcta tgtggaatta tcctacacgg agttctgccg
    14041 ttgcagggaa tccgaccaga cctatatgga caagctgttt atccccattc aaggctgtct
    14101 gcttgaagtc gtgagggagc aatacacaga cttctaccgt gacaaggaac ggtggcgtta
    14161 tctgcaaaaa ttagatacaa agaatagact gctatctctc gacggattta cggacagcga
    14221 ggggaatcct ctggacttta tcactgatga agcggtggac attgcagaaa ccgttgtcaa
    14281 tgcggtcatg gtggacaggc tgaaagccgc cctgcctttg ctgtcggata gtgaacagga
    14341 gctgatacag gcaatctttt ttgacggact ttccgagcgt gaagtcgggg cgaggttggg
    14401 cataacccag agcgttgtaa acaaacgcaa agccagaatc ctaataaaac taagaaagat
    14461 aatagaaaat taaaatttaa ggcgttcagc ccccttgttt tttcctttgg gaagatgagg
    14521 gggcttttct ctgccctctc aatcaattct gattggagga agtaagaatg gcatacaacc
    14581 acggacggga ggacaggaaa tggcgtatct ggaaagaagc ggaggaaaag ctgctgcgtg
    14641 agtgcggcgt tgatgaagcg accattgagc agatacgcat ggcggacagg gcagacttca
    14701 attccaacag gcggttttac cgatggacga atgacgttgc ggaatatctt gaggacatgg
    14761 caggcaggga gcggcaggcg gaagtgggta cggttgcgga gttactggaa gagattgaga
    14821 gcgaaaatct ctatcaagta ttagtcacgg tggacgggcg taccttgaaa atcgtcctgc
    14881 tgaaaatgca ggggtattcc acaaaggaga ttgccccgct tgtgcatttg acgactggtg
    14941 ccatctatgc gaggttagac catctgcgga agaagctgcg gaaaatttta tagcttctaa
    15001 aacagcctgc catcctgcgg gctactgggt gagggatgga aatcccctca ctcatttttt
    15061 gcaggaggac aacaggatgg catacagggt taaggcatac acgcttcggg aggaatccac
    15121 ggaaagcggc acaaggtatt ttatcagctt taaggacggg cagggcaaat cccacgagtt
    15181 ggaagtgtcg gaacagttct ttatggagtt tcggcagatg gagcgcagga acaggaatct
    15241 tttctaatgg gacgagcggc acagggagtt taacgaggta tgggacgaaa ccctttacag
    15301 acgggcgttg cgtgtgccta agagccttga tgaacgcatg gttgaggaag aacggaatga
    15361 aacgctctat aaggcggttg ggagccttcc agagatacaa aggcggcgtt tcctgctcta
    15421 ctacgagtat gagttcaatt tttaccaaat cgccgctatg gagcattgca ccgcttcggc
    15481 aatacagaaa tctgttgcga ttgcaaagga gaaagtaaag gcggaaattg aagaaatatc
    15541 tccaaccgtg accgacaccg cccgaaaaag aaatctgttt tttatttgtg tgggattggc
    15601 ggcattccat actctcactt ttttccgtgg gagtaaatct atttttaagg aggtcaacgc
    15661 ctatgtgcaa cgaaaacaaa gacaccgccc gaggaggaaa gccatgcaga agttacagac
    15721 agtcaacgcc gaaacgctcc tttatgaacc gcttgagaaa ccatcctttg tggtggacag
    15781 ccttatcccg acaggcttat cgctgttctg cggctcacag aagataggca aaagctggct
    15841 catgctgaag ctatgcttat gcgtgtcgca gggaatccct ttatgggata tgccgacaat
    15901 ggagggcgat gtgctttacc tctgccttga ggacacgttc tgccgcatac aggacaggtt
    15961 atttcgtttg acggacgaag caagcgggcg gctccacttt gccgtggcaa gctgcaagct
    16021 gtcagacggt cttatcgtgc agcttgaaga ttatctgaaa gattacccag acagcaggct
    16081 cattgtcatt gataccttgc agaaagtccg tacagcttca aaagacaatg cctatgcaag
    16141 cgactatggg gacatctccc tcatcaaaga ctttgccgac aggcactctc tggcggtcat
    16201 tgtcgtacac cacatccgaa agcagaatga cagcgacgtg ttcaacaagg tgtctgggac
    16261 gacaggatta acggggagtg cggacgctac ctttgttctg gaaaaggaga aacgtgcgtc
    16321 tgacaccgcc aagctgtatg tgacgggcag ggacacgcct tatcaggaat acacgctgcg
    16381 tttccgtgat tgccgttggg agcttgtgga gcggaaaacg caggagcagc ttgcgaaaga
    16441 aacgatacca gatgtccttt ttcggttggt ggattttatg agggataagg aagaatggat
    16501 aggcacggca acggaactgt tagccgctat gggggaaacg gaaaccatac ccacggtgat
    16561 tacgaaatgg ctgaatgaat accgcaccac atttttaagc gagaaccgta tctgctacca
    16621 gtacagccgc aggaaagacg gcaggcggat tgcccttgca aggagggcgg gtgacagcgg
    16681 tgatggtggt gacagcgata ttaggata
//
LOCUS       DASFQS010000248        14303 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.059, whole genome shotgun sequence.
ACCESSION   DASFQS010000248 DASFQS010000000
VERSION     DASFQS010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 14303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14303
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.059"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            complement(104..493)
                     /locus_tag="U1041_002329"
     CDS             complement(104..493)
                     /locus_tag="U1041_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769395.1"
                     /translation="MRVIIHYPKTIKQLSSQKLPLLVDGKIAGTVTQGKILSLPITQP
                     SVTLSIRGGKKSSIQVKDGDRVQIVENSKYFTLYYFSLAIVPIALLFNLPTLVKTILL
                     ILALAITLLGQEIFPKYIINTEKSSDH"
     gene            628..1044
                     /locus_tag="U1041_002330"
     CDS             628..1044
                     /locus_tag="U1041_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEM4769396.1"
                     /translation="MNYLQNYILSKSSYLPSDKLFILQKELEDLDDEALNVLMMVEMR
                     QPLVALILAIFFGEFGVDRFYVGNKELGFAKLIAFAVSFVTLFILIGFLLFLGLYLWK
                     FIDCFLIMRACKEANFERLMLQIHQYKAFQHSNQTF"
     gene            1214..1702
                     /locus_tag="U1041_002331"
     CDS             1214..1702
                     /locus_tag="U1041_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM4769397.1"
                     /translation="MQTKKMSMFLFFSYLLLLTWMIVFKMDLSIVYGRYGYASINLIP
                     FAGTAVYDGVLDFPEILFNIVSFIPFGIYMEMLFRKASWVANLCLIMLVSLCFEVLQY
                     LLLLGVADITDLLANGLGGAIGINIMYVLTSIWREKAYVRMNIFCFVLTFFVILIAYS
                     AM"
     gene            1743..2870
                     /gene="queG"
                     /locus_tag="U1041_002332"
     CDS             1743..2870
                     /gene="queG"
                     /locus_tag="U1041_002332"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEM4769398.1"
                     /translation="MNIKEEIIKLSQEIGISKIGFTTADDFAYLEKSLRASQEEGRSS
                     GFEHKNIEERIRPKLSLESAKTIISIAVAYPRHLPVKPQKTQYKRGKITPSSWGLDYH
                     YILQDKMERLARGIEKLTDGLEYKAMVDTGALVDTAVARRAGIGFIGKNGLVISKEFG
                     SYMFLGELVTNLEIEPDQPVDYDCGDCNRCVAACPTSCLLGDTTMNARRCLSFQTQDK
                     GMMDMEFRKKIKTVIYGCDICQICCPYNKGISSPPVVEIDPDLAEPELIPFLDLSNGQ
                     FKEKFGLIAGSWRGKNILQRNAIIALANSNDRSAIPKLLEIIDKKQNPVHMATAIWAL
                     GQLVKQPNDEVVSFIAGISSDNDDVIAEQTAFLNMVKDLQM"
     gene            2905..4000
                     /gene="prfB"
                     /locus_tag="U1041_002333"
     CDS             join(2905..2976,2978..4000)
                     /gene="prfB"
                     /locus_tag="U1041_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775232.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEM4769399.1"
                     /translation="MDTAEIRQKIEELGKKLTSFRGSLDLEGLEEEIAILENKMTEPD
                     FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEKLAE
                     LDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFTV
                     ETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVE
                     VMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRT
                     QYGNRDQAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDH
                     RTGYEVAQVDKVMDGDLDGFIDAYLKWRIS"
     gene            4143..4835
                     /gene="ftsE"
                     /locus_tag="U1041_002334"
     CDS             4143..4835
                     /gene="ftsE"
                     /locus_tag="U1041_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012130521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEM4769400.1"
                     /translation="MGIIEMKDVSKKYGNGTTALRGVSVNVEAGEFAYIVGPSGAGKS
                     TFIKLLYREEKLDKGSLKVGKFDLAKIKKRDVPLLRRSVGVVFQDYKLLPKKTVFENI
                     AYAMEVIGEKPRNIKKRVMEVLDLVGLKHKIRSFPNELSGGEQQRIAIARAIVNNPKV
                     LIADEPTGNLDPENSWEIMNLLERINLQGTTILMATHNSQIVNTLRHRVIAIEDGRVV
                     RDEAEGEYGYDE"
     gene            4828..5757
                     /locus_tag="U1041_002335"
     CDS             4828..5757
                     /locus_tag="U1041_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4769401.1"
                     /translation="MSNRFFRHFIESLKSLKRNGWMTIAAISSVAITLTLVGLFASVI
                     LNTAKLASDLEQNVRINVYLRANSTDQAETIVNEAGETVANPDYQKVYNQITALENVQ
                     SVTYSSKDEQLQKLTATLGDTWNLFQGDANPLYDAYIIDTTEPQYVKTVATEIAKIDG
                     VTEVRDGEVETERIFKLANLVRTWGLAATGLLLFTAVFLISNTIRITIISRSREIQIM
                     RLVGAKNSYIRGPFLWEGAWVGLLGAILPSVLVYSLYKMIYTSVNASLASQDLSLISM
                     NVFVPGMIGALFVIGIIIGSLGSVISMNRYLKI"
     gene            complement(5810..5962)
                     /locus_tag="U1041_002336"
     CDS             complement(5810..5962)
                     /locus_tag="U1041_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HEM4769402.1"
                     /translation="MPTLILFLIIVILFSLAIRSLIKGKGSCGDCSCDCTIKQEMNES
                     SHHRHP"
     gene            complement(5962..8106)
                     /gene="feoB"
                     /locus_tag="U1041_002337"
     CDS             complement(5962..8106)
                     /gene="feoB"
                     /locus_tag="U1041_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEM4769403.1"
                     /translation="MTKHIALAGNPNSGKTTLFNLLTGTNQRVGNWPGVTVERKSGTI
                     KKRKHLLIQDLPGIYSLSPYTPEERVARDYLIADQPAAILNVLDATNLERNLYLTLQL
                     LEMGLPIVIALNMTDALKSQGRSINSDQLSYQLGVPVQPISALKKLGISQLLHEVEKI
                     TNQQAEPIYPQYDKQFEAGLAQVIDLLSDSIPNHQKRFYAIKLLEQDQVILDQLQLNA
                     QDMLVLTEIIAILEKIYADDIEAIIVNQRYQFIEKITELVTKDSDKAFNLSDNIDRLV
                     TNRFLALPIFAAVMWLTYFLSIQTVGTMGTDWVNDVLFGELVPGLIQENLDRFEIAGW
                     LQSLVLDGIIAGCGAILGFVPQIFVLFVCLGILEDIGYMSRVAFVMDRIFRRFGLSGK
                     SFIPMLISTGCGVPGVMASRTIENEQDRKITIMTATFMPCSAKLPIISLVAGAFFPDN
                     HWIAPSAYFVGMAAIVLSGMALKKTKQFGGVASPFIMELPSYHLPKLSTVLRYAFDKA
                     LSFIKRAGTIIFVTNIIIWFSSSYNWSLQMVETDESILASIGRSFSLLFAPLGFGNWR
                     ATVAAITGLLAKETVIATFGILYKLGETTEENPELWGLLQQDYTALSAYSFLVFNLLC
                     APCFAAIGAIHREMGEAKCTWIAIGFQTGLAYASSLVIYQIGLVLIYGQLPTVWTFIA
                     IFLIITAIYSLVKKPTNTLPIVTLKTLEKGEY"
     gene            complement(8103..8573)
                     /locus_tag="U1041_002338"
     CDS             complement(8103..8573)
                     /locus_tag="U1041_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEM4769404.1"
                     /translation="MKLQNLQVGQSYLVKDCLTQDDIRKHLAHLGLKVGEEIRIISKT
                     KTNAIFQVKASRLALDREIIESLVLIEKSATEIINLSEAPIGSSAKVMDIYATGALRR
                     RLMDMGLTKNTQLFLKKVAPLGDPIEITLRGYELTLRKSEAQMIGVQITSEVRK"
     gene            8742..8814
                     /locus_tag="U1041_002339"
     tRNA            8742..8814
                     /locus_tag="U1041_002339"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8775..8777,aa:Thr,seq:ggt)
     gene            9227..10954
                     /locus_tag="U1041_002340"
     CDS             9227..10954
                     /locus_tag="U1041_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4769405.1"
                     /translation="MFKLIFDYVKQHKWLYLVVVVTLIIYDITLLIPTQIIQRMVDTL
                     TKNGLTERILVQEMGLLLLVTFLNYGMGFIWHLKLFQASVNFKFDMQQRAFKKMVTMR
                     TPFYEKFRSGDVMTRFSTDVDGLMEMVGYGLMIVVYSGGMLAFIIPTMLLIDWKISFL
                     AILPMIFMAVAFFFIGRKQDLAIDANREAVAQLNNEVLEVVEGIRVTRAYSKKAAQKA
                     QFQERTKELADGGDRITTLQSLYNPLATVGLGLSTILVLVLGAGAVKSGQLSLGQVIA
                     LQLYVSSLLEPFWTLADFILVYQTGKTSFEKLQELIETGDDLEVDGSVEIAELDSISF
                     KNYSFSYPQSDRPSLQEINWTLKAGQTVGIVGKTGSGKTSLVRQLLRQYPVGQGEFLV
                     NHQSVLDFKRSSLEQKIGYVPQEHILFSKSVRENIAFGKRDSSLEEIEAAIATAAFSQ
                     DLERMSHGLDTMIGERGVSISGGQKQRISIARAFLREPDLLILDDSLSAVDARTEGQI
                     IQNIQKERAGKTNVIVTHRLSAVNHADWVLVMDEGRIVEEGRPADLLAQEGWYYEQYQ
                     RQQSQEGGE"
     gene            10954..12693
                     /locus_tag="U1041_002341"
     CDS             10954..12693
                     /locus_tag="U1041_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4769406.1"
                     /translation="MKVLGFLLKQIGRVKWLFTFAVVCYLAASSLLRFAPLIIQKAID
                     GPLRALSEGQPFQESLFLQMSSQYVAMIFLGALGYYLSMRILMHSANRIAEYLRNQAY
                     DVMQRLPISYFDDKPAGKIATRIVNDTETLRNQFYGTLVNVFNSFVRLLLTYGIVFYL
                     NPSLGSALLLLIPVFIGIQFIYKKLTDKPMKDFYDARSEVNTQVNETMNGASLIQLYG
                     QEERVLAEFEATADKMRRADNQIIWAQSSSTWTLLEFLKFLVVTGILTIIGYQFLQGQ
                     SSLSPGKLFVYIDYIEGIFVSLGALVKQFPNLLRSIETGKRLMGLLEEETEPDSSAEL
                     TVTDGQVVFNQVTFAYEVGKPILKGISIQADKGETIALVGHTGSGKSSIMNLLYRFYD
                     PQEGQVLIDGKNIRDYSRESLRSHMGIVLQDPYLFTGTIASNIAMNEEEADREKIAQS
                     LEKVGAGPMLARLEKGMDEPVVEKGAAFSSGERQLIAFARTLYSDPKILILDEATSHI
                     DTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQNADQILVLDQGRIIEHGKHEELVARD
                     GVYAQMHEIQAKV"
     gene            12747..13442
                     /locus_tag="U1041_002342"
     CDS             12747..13442
                     /locus_tag="U1041_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4769407.1"
                     /translation="MKALIFDVDDTLYDQIQPFERALERHIEVAREQIEPLYLSFRRY
                     ADEVFEATAIGKMSLKDSHIYRMKHALADFGYQVSDATALAIQIDYDYFQGQIELSPV
                     FPEIFSWCQAQGIAMGIITNGPYRHQLRKIRTMGLVNWFELEHVLISGQVGITKPNPA
                     IFQLMEERLGLSGVDICYLGDSFENDVVGAKAANWKAIWFNHRKRVEPTAPYQADKVV
                     TDWDELVEVIQSF"
     gene            13596..14165
                     /locus_tag="U1041_002343"
     CDS             13596..14165
                     /locus_tag="U1041_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002925829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEM4769408.1"
                     /translation="MELPMTQAFFPIHTLETVSPELRENLATVKKNNGGYIPNLIGLL
                     ANSPTALETYQTVSGINRRSSLNPTEREVVQITAAVANGCGFCVAGHTAISIKQVKMP
                     DVILQALRQGTPIETDAKLDALARFTLAVIHEKGKVEQPLLEEFFQEGFTAENALDVV
                     LGVSLATLCNYANNLINTPINPELQAYAL"
BASE COUNT         3998 a         2602 c         3369 g         4334 t
ORIGIN      
        1 cgaactctga gaagtggctt tggacttttt gcccagcctc ctgcgcctcg ttgccttgca
       61 ctaaaaccaa actgaagact atatcatttg aaaaagctca gatttagtgg tctgagcttt
      121 tttctgtatt gataatgtat tttgggaaga tttcttgtcc caataaagta atggctagtg
      181 ctagtatgag gaggatggtt ttgacaagag ttggtaagtt aaacagtaag gcgattggta
      241 cgatagccaa gctgaaatag tagagagtga agtatttgct attctccact atttggaccc
      301 tatcgccgtc tttaacttga atgcttgatt ttttaccccc tcgaatgctt agtgtaacag
      361 atggttgtgt aattggtaag cttagaattt taccttgagt aactgtccca gcaatttttc
      421 catctaccag aagcggaagc ttttgggagg atagttgttt gatagttttt ggataatgaa
      481 taataactct catatgaacc tccttgtaat ccagtttcat tatagcaaaa aaatggaaaa
      541 atgtaaacga tttctgacgc tgttttcccc tacaggcttg cttgaagaat aagaaactgc
      601 tataattttg aagaggtagg agtttatatg aattatcttc agaattatat tttaagtaaa
      661 agcagttatt tgccatctga taagttattc attctgcaaa aagaactaga agatttagat
      721 gatgaggctt taaacgttct tatgatggtt gagatgcgtc aacctcttgt cgctcttatt
      781 ttggctattt tcttcggtga gtttggtgtc gaccgttttt atgtcgggaa taaagaattg
      841 ggatttgcca agctgattgc ttttgcagta tcttttgtta cgctatttat cttgattggg
      901 ttcttgttat ttttgggact ttatttgtgg aagtttattg attgcttctt aatcatgcga
      961 gcatgtaagg aagcgaactt tgagcgtttg atgctacaaa tccatcaata taaggctttt
     1021 cagcatagca atcagacatt ttaagtaaga tatttttggg aataagggga ggcttggtag
     1081 tgtcttcctt ttctgttttt agtaggctgt aaagtacttg taatatggaa cgagctttgt
     1141 cacagaagtg acattttata gaacagcatt tatgatataa tgataaaata tgctagttga
     1201 gaggagaatt tctatgcaga caaagaaaat gagtatgttt ttattttttt cctatctcct
     1261 tttacttact tggatgattg tctttaagat ggacttgagc atcgtatatg gacgctatgg
     1321 ttatgctagt ataaacttaa ttccgtttgc aggaacagcg gtctatgatg gagtgctgga
     1381 ttttccagaa attctattta atattgtaag ttttattccc tttggtattt atatggaaat
     1441 gctatttcgc aaggcatcgt gggtggctaa tctatgtttg attatgttag tgagtctctg
     1501 ttttgaggtt ctgcaatatc ttcttttgct tggggttgca gatataactg atttactggc
     1561 taacggctta gggggagcaa tcggtattaa tatcatgtat gtcttgacca gtatttggcg
     1621 ggagaaggcc tatgttcgta tgaatatttt ttgttttgtg ctaacgtttt ttgttatatt
     1681 aatagcttat tcagctatgt aggttttgct aaatatatcc aaagtttgct aaaatgaata
     1741 taatgaatat taaggaagag attattaaat tatctcagga aatcggaatc tcgaagattg
     1801 gttttacaac ggctgatgat tttgcttatt tggagaaatc acttcgtgct agtcaggaag
     1861 aggggcgttc gtcaggattt gaacacaaga atatcgaaga acgtatccgt cccaaactgt
     1921 cgttagaatc tgccaaaacc atcatttcta tcgcggtagc ttatcctcga catttgcctg
     1981 tcaaaccgca gaagacccaa tacaaacgtg ggaagattac ccctagttca tgggggcttg
     2041 attaccacta tatcttgcaa gataagatgg agcgtttggc acggggaatt gagaaactga
     2101 cggatggttt ggaatacaag gctatggtag atacaggagc tttggtggat acagcggtcg
     2161 ctcgtcgtgc aggaattggc tttatcggga agaatgggct agtcatttct aaggaatttg
     2221 gttcctatat gtttctagga gaattagtga ccaatctaga aatcgaacca gatcagccag
     2281 tcgactacga ctgtggggac tgtaatcgtt gtgttgcagc ctgtccgacg tcttgtctat
     2341 taggtgatac gactatgaat gcccgtcgtt gcttgtcctt tcagacccag gataagggta
     2401 tgatggacat ggagtttcgt aagaaaatca agacggtcat ctatggttgt gatatttgcc
     2461 agatttgttg tccttacaac aagggaattt ccagtccgcc tgtggtggag attgatccag
     2521 atttggctga gccagagctg attccctttt tggatttgtc gaatggacag ttcaaggaaa
     2581 aattcggtct gattgctggt tcttggaggg gaaaaaatat tctccagcgc aatgccatca
     2641 ttgccttagc taatagtaat gatcgctctg ccattcccaa actcctagaa atcatcgata
     2701 aaaaacaaaa tccggtccac atggcaacgg ctatctgggc cttggggcaa ttggtcaaac
     2761 agcccaatga tgaggtggtt tcctttatcg caggtatttc atcagacaat gatgatgtca
     2821 tagcagagca aacggccttt ctcaacatgg tcaaggactt gcaaatgtga tataataaat
     2881 attatgaata aaaatgaggt gtatatggat acagcagaaa ttcgccaaaa gattgaagaa
     2941 cttggcaaaa aattaacttc ttttaggggg tctctttgac ttagaaggtc tagaagaaga
     3001 gattgccatt cttgagaaca agatgacgga gccagatttc tggaatgata atttggcagc
     3061 ccagaagacg tctcaggagt tgaatgaatt aaaaaacacc tacggaaatt tccatcagat
     3121 gttggattta tatgatgaat ccgaaatttt gctagatttt ctagcagaag atgagtctgt
     3181 tcgggatgag ttggttgaaa agttagcgga attggacaaa accatgactg cttatgaaat
     3241 gaccttgctc ttgtcagaac cctatgatca caataacgct atcttggaaa tccatccagg
     3301 ttcgggtggt accgaggcac aagactgggg agaaatgctc ctgcggatgt atcagcgtta
     3361 tggaaatgcc aaaggtttta cagtagaaac attggattat caagctggtg atgaggcagg
     3421 tattaagtcc gtgactctaa gctttacagg tccaaatgct tatggtttgc ttaagtcaga
     3481 aatgggtgtt catcgtttgg tgcgtatctc accttttgac tcagcaaaac gtcgccatac
     3541 ttcctttaca tctgtagagg taatgcctga gttggacgat accattgaaa ttgaaatcag
     3601 agatgatgaa gtgaagatgg ataccttccg ctcaggtggt gccggtggac agaacgtcaa
     3661 caaggtttca acaggtgtgc gtttgaccca tattccgaca ggtattgtga ctcagtcaac
     3721 tgttgaccgg acccagtatg gcaaccgtga tcaagctatg aaactcttgc aagctaaatt
     3781 gtatcaattg gagcaggaga agaaggctgc agaggtcgac tcactcaagg gtgacaagaa
     3841 agagataact tggggaagtc agattcgttc ttatgtcttt acaccttata caatggtaaa
     3901 agaccaccgt actggttatg aggtggctca agtcgataag gttatggacg gagacttgga
     3961 cggctttata gatgcttatt taaaatggcg aattagctaa gaacctgtat ttacaagtga
     4021 agtgcttata aataagagat agtttttcgc tcatcaagga agttttttga aagaatacgg
     4081 actgtatttt gaaaaaaacg ttctcaaatc taaagaaagg actgtctaag acaggaaatc
     4141 ctatgggaat aatagaaatg aaagacgttt ccaagaaata tggaaacgga acgactgccc
     4201 ttcgcggagt atcagtcaat gttgaagcgg gagaatttgc ctacattgta ggtccttctg
     4261 gtgcaggtaa gtcaaccttt atcaaactct tgtatcggga ggaaaagctc gataagggga
     4321 gtctaaaggt tggtaagttt gaccttgcaa aaattaaaaa gagagatgtt cctcttctac
     4381 gtcgtagtgt aggagtggtt ttccaagact acaaactctt acctaaaaag actgtctttg
     4441 aaaatattgc ttatgcgatg gaagttatcg gtgaaaaacc acggaatatt aagaaacgtg
     4501 taatggaagt tttagatttg gttggtttga aacacaagat tcgctctttc ccaaatgaac
     4561 tttcaggtgg tgagcaacag cggattgcta ttgcccgtgc cattgtaaat aatcctaaag
     4621 tattgattgc tgatgaacca actggtaact tggaccctga aaactcttgg gaaatcatga
     4681 atctattgga gcgaattaac ttacagggga caacgatttt gatggcgaca cacaatagtc
     4741 agattgtaaa tacacttcgt caccgtgtta ttgcgattga agatggtcgt gtagtacgtg
     4801 atgaagcgga aggagaatat ggatacgatg agtaatcgat tttttagaca ctttattgag
     4861 tcattgaaga gtttgaagcg aaatggttgg atgacgattg cagccatttc atctgtagcc
     4921 attaccctta ccttggttgg tctatttgct tcagttattt tgaacacagc aaagctcgct
     4981 tcggatttgg aacagaatgt acgtatcaat gtatacttga gagcgaactc aactgatcaa
     5041 gctgagacga ttgtgaacga agcaggagag acggtagcta atccagatta tcaaaaggtg
     5101 tacaatcaga ttacagcctt agaaaatgta caatctgtta cttattcaag taaggatgaa
     5161 cagttgcaga aattaacagc taccttggga gatacttgga acctattcca aggagatgcc
     5221 aatccacttt acgatgctta tatcattgat acgactgaac cgcagtatgt aaaaactgtt
     5281 gcaacagaga ttgctaaaat tgatggtgtt acagaggtac gcgatgggga agttgaaacg
     5341 gaacgtattt ttaaattagc taatctagtt cgtacatggg gattggcagc aactggctta
     5401 ttgctgttta ctgctgtttt cttgatttcc aatactattc ggattaccat tatttctcgt
     5461 agccgtgaaa ttcagattat gcgtctggtt ggtgctaaaa acagttatat ccgtgggcca
     5521 ttcctctggg aaggtgcctg ggtaggtctc ctcggagcta ttttgccttc tgttttagtc
     5581 tattctcttt ataagatgat ctatacttca gtaaatgcta gtcttgctag tcaagatttg
     5641 tctctgatta gtatgaatgt ctttgttcca ggaatgattg gcgcactttt tgtaattggt
     5701 attattattg gttccttggg atcagtcatt tccatgaacc gctacttaaa aatttaatag
     5761 acaagctaca tgtaaaaagg tctgcacaat aatgaggcag acctttttgt tatggatgtc
     5821 tatggtgaga agattcgttc atctcttgct taatagtaca gtcgcaggaa caatctccgc
     5881 aggatccttt tcctttgatg agactgcgaa tagcaagaga aaataagatg acgatgatga
     5941 gaaagaggat aagtgtgggc attaatattc tcctttttct aatgttttta gcgtgacgat
     6001 tggaagagtg ttggttggtt ttttcactag gctgtagata gctgtgataa ttagaaagat
     6061 agcgataaat gtccagacgg ttggtaattg tccgtagata agtacaagac caatctgata
     6121 gataaccaaa ctacttgcat aggctaaacc tgtttggaaa ccgatagcaa tccatgtaca
     6181 cttggcttct cccatttcac ggtgaatggc accaatagcc gcaaaacaag gggcacagag
     6241 gagattgaag actaggaagg agtaggctga taacgctgta tagtcttgtt gtaaaagccc
     6301 ccagagttcg ggattttctt cggttgtttc tcctaattta tagaggatac caaaggtggc
     6361 aatgacggtt tccttggcta agagacctgt aatggctgca acagttgctc gccaatttcc
     6421 gaaaccaagt ggggcaaaga ggagagaaaa actgcgtcca atggaggcta agatactctc
     6481 atctgtttct accatttgta aagaccaatt ataggaactg ctgaaccaaa taatgatgtt
     6541 ggtcacaaat ataatggtac cagctcgctt gataaaacta agtgccttat cgaatgcata
     6601 tcggagaacc gtactgagtt tcggtaagtg ataagatggt aattccatga taaaggggct
     6661 tgcgactcca ccgaactgct tggtcttttt tagtgccatt ccggatagga cgatggcagc
     6721 cataccgaca aaataggcgc ttggagcaat ccaatgattg tcaggaaaga aagcaccggc
     6781 taccagcgaa atgataggaa gtttggcaga acagggcatg aaggttgcgg tcataatggt
     6841 gatttttcgg tcctgttcat tttcaatagt ccggcttgcc atgactccag gaacgccaca
     6901 gcctgtggaa atcaacatgg gaataaagga tttgcctgat agaccaaaac gtctaaaaat
     6961 cctatccatg acaaaggcga ctcggctcat atagccgatg tcttccaaga ttcccaagca
     7021 gacgaagagg acgaaaattt gtggtacaaa acctagaatg gctccgcatc ctgcaataat
     7081 gccatcaagg accagagatt gtagccagcc agcgatttca aatcgatcta gattttcctg
     7141 aataaggcct ggaacaagct ctccgaagag gacatcattt acccagtcag tacccattgt
     7201 accaaccgtt tgaatagaca ggaagtaggt cagccacatg actgccgcaa agatagggag
     7261 ggcaagaaaa cgattggtaa caagtcggtc tatgttatca gacaggttaa aggccttatc
     7321 gctgtctttt gtgaccagtt ctgtgatttt ctcgataaat tggtagcgtt gattaacgat
     7381 aatggcttct atatcgtctg cgtaaatttt ttccaaaatg gcaatgattt cggttaaaac
     7441 aagcatgtct tgcgcattga gttgtaattg gtctagaatg acttgatctt gttcgagtag
     7501 cttaatggcg tagaagcgtt tttgatgatt tgggatggaa tccgataata ggtcaataac
     7561 ttgggcgaga ccggcttcaa attgtttgtc atactgagga tagattggct cggcttgttg
     7621 attggtaatt ttttctactt catggaggag ctgggatata cctagctttt ttagtgcact
     7681 gataggctgt acaggaactc ccagttgata ggagagctgg tcgctgttta ttgagcgacc
     7741 ttgacttttc agggcgtctg tcatattgag ggcgataaca ataggaaggc ccatttctaa
     7801 taactgcaag gtcagataga gattccgctc caagtttgtt gcatcaagga cgttgaggat
     7861 agcagctggt tggtccgcta tcaaataatc tctggcaacc cgttcttctg gtgtgtaggg
     7921 agacagcgag tagatacctg gtaaatcttg aattagtaaa tgttttcgct ttttgatggt
     7981 tccagatttt ctttcaacgg tgactccagg ccagttaccg acacgttggt tggttcctgt
     8041 taggaggttg aaaagagttg tttttccgct atttggattt cctgcaaggg cgatgtgttt
     8101 tgtcatttcc tcacctcgct tgtgatttga acaccaatca tttgcgcttc ggatttgcgt
     8161 agtgtcagct cgtatcctct caaggtaatt tcgattggat cgcccagggg agcgactttt
     8221 ttgagaaata gctgcgtgtt ctttgtaagt cccatatcca tgaggcgacg acggagtgca
     8281 cctgttgcat agatgtccat gaccttggct gagctaccaa taggtgcctc ggatagattg
     8341 attatttccg tagctgactt ttctattaaa accagagatt caataatttc tctgtctagg
     8401 gctagacggc ttgccttgac ttggaaaatt gcattggtct tggtttttga aatgatgcga
     8461 atctcttctc cgacttttaa acccaagtgc gctaagtgtt tacgaatatc atcttgcgtt
     8521 aggcaatctt tgactaaata agattgtcca acttgaaggt tttgcagttt catatcgttt
     8581 cctttgtgat ttttataaca atagtatagc acaattcctt aaaagtgtca gataattttt
     8641 aggaatagct tattttctct ttattttgct ctttattttt ctcaatattt ccaaaaaatc
     8701 cattgacttt ttttagagat atgatatact agtcaggtac tgctggttta gctcagtcgg
     8761 tagagcgcat ccatggtaag gatgaggtcg ccggttcaat cccggcaact agcataaaat
     8821 aacgttgaaa acccttgaaa cacaagggtt tttgttgtgt ctgccccaaa tctgccccta
     8881 atatcaaaaa aatcttgact tgtcagttta ttatgttaga atagggctta gaaaaaagaa
     8941 aggagtaaaa caaatgaaca cacaacttgt ccttcagcaa gctatttttt atcatacact
     9001 cctttctaag caggaaaaca gggctcattg aaagactttt gaagttttcg tgggcctact
     9061 ctggaatagt gggaaagtca agcatgtctt atcatggtca ggtgggcttt tcagggctat
     9121 tcgagggttg gtctattttt gtggactgag gtatgactgg gtggagtgat agacacctag
     9181 gcttttttgt gcttagaaag gaatagtttt aacttaaagg agaaatatgt ttaaattgat
     9241 ttttgattac gtcaagcaac acaagtggct ctacttggtg gttgttgtga ccttgattat
     9301 ttacgatatc accctcttga taccaacgca gattattcag cggatggtgg atacgctgac
     9361 caagaatggc ttaactgagc gcattttagt tcaagagatg ggactcttgc tcttggtgac
     9421 ctttctcaat tatgggatgg gctttatctg gcatcttaag ctttttcagg cctcggtcaa
     9481 tttcaaattt gatatgcaac aacgagcctt taaaaagatg gtgactatgc ggacaccttt
     9541 ttatgaaaaa tttcggtctg gggacgtcat gacccgcttt tctacggatg ttgatgggct
     9601 gatggagatg gtcggatacg ggctcatgat tgtggtctat tccgggggta tgttagcatt
     9661 tatcattcct accatgcttt tgattgactg gaagatttcc ttccttgcta ttttaccgat
     9721 gatttttatg gcagttgctt tctttttcat tggtcgcaag caggatctgg ctattgatgc
     9781 caaccgtgag gcagttgcac agctcaataa tgaggttttg gaagttgtcg agggtattcg
     9841 tgtaacccgg gcctatagca aaaaggcagc tcaaaaggct cagtttcagg agcgaaccaa
     9901 ggaattggcg gatggtgggg accggattac taccctgcaa tccctttata accccctggc
     9961 tacggtcggt ctgggtttgt cgactatcct ggtcttggtg cttggagcag gggcagtcaa
    10021 gtctggtcag ctcagcctgg ggcaggtcat cgccctccaa ctctatgtca gttccctcct
    10081 agagcctttc tggaccctgg cggatttcat actggtttac cagactggta aaacttcatt
    10141 tgaaaaactg caggagctga ttgaaacagg agatgacttg gaagtggatg gctcggtaga
    10201 aatagccgag ctggatagta tttctttcaa gaactacagc tttagctatc ctcagtcgga
    10261 ccgtccgagt ttgcaggaga ttaactggac cttgaaagcc ggtcagacag tcgggattgt
    10321 tgggaaaacg ggttccggca agaccagctt ggttagacaa ttgttacgtc agtatccagt
    10381 tgggcaggga gagtttcttg ttaatcatca gtctgtcctg gacttcaaac gctcaagcct
    10441 ggagcaaaaa attggctatg ttccccaaga acacattctc ttttcaaaat cagttaggga
    10501 aaatattgcc tttggtaagc gtgacagtag tttggaagaa attgaagcgg ctatcgcaac
    10561 cgcagccttt agccaggact tagagcggat gagtcatgga ctggacacca tgattggcga
    10621 gcggggtgtg tctatttctg gtggtcagaa acaacggatt tctattgcgc gtgccttttt
    10681 acgagagcca gacttgctca ttttagatga ttccctgtca gcagttgatg ctcgaacaga
    10741 aggccagatt atccaaaata tccagaaaga acgtgcaggc aagacaaatg tcattgtgac
    10801 ccaccgcctg tctgctgtca accatgcgga ctgggtgcta gtcatggacg agggtcgcat
    10861 tgtcgaagaa ggacgaccgg ccgacctgct agcccaagaa ggctggtact atgaacaata
    10921 ccagcgccaa caaagtcagg aaggaggaga ataatgaagg ttttaggatt tttattgaag
    10981 caaattggtc gcgttaagtg gctctttacg tttgctgtag tctgttactt agcagcttct
    11041 agcctcttgc gttttgcccc acttattatt caaaaagcca tcgatggacc tttacgggcc
    11101 ttgagtgaag gccaaccctt ccaagaatcc cttttcttgc agatgtcaag tcaatatgtg
    11161 gccatgattt tcttgggtgc acttggttat tacctctcca tgcgaatttt gatgcactct
    11221 gccaatagga tagcagagta tttgcgcaac caggcctatg atgttatgca gcgcctgcct
    11281 atttcttatt ttgatgacaa acctgccgga aagattgcca ctcgtattgt taacgatact
    11341 gaaaccttgc gcaatcagtt ttacggtact cttgttaatg tctttaatag ttttgttcgc
    11401 ttgcttctta cctacgggat tgttttctac ctcaatccta gtctaggttc tgctctcttg
    11461 ctactaattc cagtctttat cggtattcaa tttatctata aaaagttgac agataagcct
    11521 atgaaagact tttacgatgc gcgaagcgag gtcaatacac aggtcaatga aaccatgaat
    11581 ggtgctagtt tgatccagct ctatgggcag gaagagagag tgctagctga gtttgaagcg
    11641 acagcagata agatgcgccg tgcggataac cagattatct gggcccaatc cagctcgaca
    11701 tggaccttgt tggagtttct gaaatttctg gttgtgacag ggattttaac cattattggc
    11761 tatcaatttt tacaaggtca atcgagcttg tcaccgggta aattatttgt ctatattgat
    11821 tatattgaag ggatttttgt gtcccttggt gccttggtca agcagtttcc aaatctcctt
    11881 cggtcgattg aaacaggtaa gaggttgatg ggcttgctgg aagaagaaac ggagcctgat
    11941 agtagtgctg aattgacggt gacagacggt caggtggtct ttaaccaagt gacctttgcc
    12001 tacgaagttg gcaagcctat tctcaagggc atctccattc aggctgacaa aggagaaacc
    12061 attgctctgg tgggccacac aggatcaggc aagtcctcca ttatgaacct cctctaccgt
    12121 ttctatgatc ctcaggaggg tcaggttttg attgatggga aaaacatccg tgactattca
    12181 agggaaagcc tgcggagtca tatggggatt gtcctacaag atccttatct cttcaccggc
    12241 acaatcgcca gcaacatagc catgaacgag gaagaggcgg atagggagaa gattgcccag
    12301 tcgcttgaaa aagttggggc agggcccatg ctggctcgat tggagaaagg catggatgag
    12361 cccgttgtcg aaaaaggtgc agctttctcc agcggtgagc ggcagctgat tgcttttgct
    12421 cgcacccttt attccgatcc aaaaatcttg attctggacg aggcgacttc ccatatcgat
    12481 acggagacag aagagattat ccagcacgct atggaagttg tcaaagaagg gcggaccacc
    12541 tttatcatcg cccaccgact ttctaccatt caaaatgcag accagattct tgtcttagat
    12601 caaggtcgaa ttattgaaca tgggaaacat gaagaattgg ttgcacgtga tggagtatat
    12661 gctcaaatgc atgagattca agcaaaggtg taataagcag ttaaaaattc caagctttgg
    12721 ctggaatttt ttgctataat tgactcatga aagccttaat ttttgatgta gatgatacgc
    12781 tttatgatca gattcaaccg tttgaacgtg ctttggaaag acacattgaa gtagcaaggg
    12841 agcaaattga accactctac ctttcctttc gcagatatgc ggatgaagta tttgaagcga
    12901 cagcaattgg aaagatgagt ctgaaagaca gtcatattta tcggatgaaa catgctttgg
    12961 cagattttgg gtatcaggtg tctgatgcaa cagccttagc tattcaaata gattatgatt
    13021 attttcaagg gcagatagag ctcagtccag tgtttccaga aatattttca tggtgtcagg
    13081 cgcaaggaat tgcaatgggg attattacga atggacctta tagacatcag ttgagaaaga
    13141 tacgcacgat ggggttagtt aattggtttg agctagaaca tgtcctaatt tctggacaag
    13201 ttggtatcac aaagccaaat cctgctattt ttcaactaat ggaagaacgt ttggggctgt
    13261 caggcgtaga tatttgttat ctaggggatt cgtttgaaaa tgatgtggta ggagcgaaag
    13321 ctgcgaattg gaaggcaatt tggtttaatc atagaaagag agtagagcca acagctccgt
    13381 atcaggcaga taaagtggtg acagattggg atgaactggt cgaagttatc cagtctttct
    13441 agtggtttct acaagggatt atcaattttt tataggtgtg ataggtaaaa tatattagca
    13501 gaatacctgt ctttatgata gtataaaatg taagcataga agtataggtg tgaatccaag
    13561 cagattttta ttcctactct atgaaatttt ttgaaatgga gttacctatg acacaagctt
    13621 tctttcctat ccatactcta gagactgtta gtccagaatt acgagaaaac cttgcgactg
    13681 tcaagaaaaa taatggcggt tatattccta atctcatcgg tcttttagcc aattctccta
    13741 cagccctaga aacctaccaa actgttagtg gtatcaatcg ccgtagtagt ctgaatccga
    13801 cagagcgtga agtggtacaa attacagctg ccgttgccaa tggctgtgga ttttgcgtgg
    13861 caggtcatac ggctatttct atcaagcagg ttaagatgcc tgatgttatt ctacaggctc
    13921 tacgccaggg aactcccata gaaacggatg caaaattaga tgctctcgct cgatttactc
    13981 tggctgttat ccatgaaaaa ggcaaggttg aacagccctt gctagaggaa tttttccaag
    14041 agggcttcac ggctgaaaat gccttggatg tggtgttagg agtcagtctt gcaactcttt
    14101 gtaattatgc caacaatctc atcaacactc ctatcaatcc agaattacag gcctatgctt
    14161 tgtaggagtt ccagcagaat atgtatcgaa aactagttag gacgtttacg ttatcctaac
    14221 tagttttttt gaattaacca agtgtgattt tcctaatata catttgatac tcttcgaaaa
    14281 tcaaaattat ccgttgtcaa ctt
//
LOCUS       DASFQS010000249         8057 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.092, whole genome shotgun sequence.
ACCESSION   DASFQS010000249 DASFQS010000000
VERSION     DASFQS010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8057
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.092"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            <1..720
                     /locus_tag="U1041_002344"
     CDS             <1..720
                     /locus_tag="U1041_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM4769409.1"
                     /translation="ILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGV
                     LARKYGMDIYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAAC
                     PQFYRFMKDDKSFVMLTDTGYVSDRMAGIVANADAYLIESNHDVEILRAGSYSWNLKQ
                     RILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQLAQADLG
                     VGVDFQVYDTSPDTATPLTKI"
     gene            977..2362
                     /locus_tag="U1041_002345"
     CDS             977..2362
                     /locus_tag="U1041_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4769410.1"
                     /translation="MEMIKCIQLEKEFAGHSLFTIQQLSLQAGQKVGLVGNNGVGKST
                     FLKILLGLDRDFVGQIEVKADWAYVPQLQERSSLSGGEQVWKSIQEAFAQRPQLLILD
                     EPTANLDQEHQEKLIKQIKRYRGSLLVVSHDRHFLNQIASHIWHLEEGSIQVYTGNYE
                     AFVESRRARREGQQEAYEAYQKKVAQLKKAQKERQVKAQKMGKRKKGVSSSEWKVSAM
                     MGSYDSQSKSMAKSAKQLEKRIERLEKVSQPRREAHIKMESKGALDTDLHRLFLLQAG
                     QVLMDEVYLFDFPQIGMTFGEKLALVGANGSGKTSFVRKLLRKELAGYYNPKLKIAYF
                     AQDLINLEEEKTAFENISCTSLQDKMTILNLLGMLGLSYDKAQQKVANLSGGERVRLS
                     LAKVLLADANLLILDEPTNFLDMAAIEALETFLKEYEGSVLLVSHDQQFVETSVHSQW
                     EIVQACLVKKS"
     gene            2454..4526
                     /locus_tag="U1041_002346"
     CDS             2454..4526
                     /locus_tag="U1041_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEM4769411.1"
                     /translation="MKKRKNKPLEHDGNFISLRLNILFSIVIFLFLVLILRLADMQII
                     NHDFYSNKLSTASQKIISNGSIRGQIYDAQGKPLVENEIQQVVSFTRSNKMSAQEMKE
                     VANKLLQWVNVSDVTITQRDKADYYLADEEVYRQVVEALSEDKKYDSDGNYLSESTIY
                     SNAVDSIPAEALQYSEQDSKAIELFKQMNGATYFSTVNLVTDTLTAEQVAHIVANESQ
                     LPGISTTNNWQRTILPTSLSSIIGTVTSEQAGLPAEDAEYYLSKGYSSNDRVGTAYLE
                     KQYEEVLQGQREKKQINLDRNGNVESIETIQEGQQGNNIKLTIDLAFQDGVNAILKKY
                     FESELATGSALYSEGVYAVALEPSTGAVLAMSGYSHEKGSGEITEDALGTITSVFTPG
                     SIVKGATISSGWENGVISGNQVQLDEPIYFAGSAPITSWWAYGSFNIDATEALEYSSN
                     AYMVKIALGLLGQTYSANMYLNDGDTLTNAMTKLRSTFAEYGLGASTGIDLPLESTGF
                     LPDEYTTANFITNAFGQFDNYTPMQMAQYAATIANNGTRISPHLVEGIYGNNAQGGLG
                     ELIETVSGKEMNQVNISAEEMSLLRQGFYQVVNGSGRFNTGSAIGRGAAVTISAKTGR
                     AETYTTTASGDVVTAVNTNVVAYAPSDNPQIAVAVVLPNLTNQSSTTTNTITQEIINL
                     YQSLHPMN"
     gene            4535..5131
                     /gene="recR"
                     /locus_tag="U1041_002347"
     CDS             4535..5131
                     /gene="recR"
                     /locus_tag="U1041_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEM4769412.1"
                     /translation="MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFA
                     KNLLAAKRDLSYCSVCGNLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHG
                     LYHVLHGLISPMNGIGPDDINLKTLLTRLMDNEVTEVIVATNATADGEATSMYISRVL
                     KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL"
     gene            5236..6282
                     /locus_tag="U1041_002348"
     CDS             5236..6282
                     /locus_tag="U1041_002348"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEM4769413.1"
                     /translation="MSKETLILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFIT
                     QTGDFVKTQEFSQTPSADEKLMTNATIVEEQKIRPSDIYEEKAVVFPVLHGPMGEDGS
                     IQGFLEVLRMPYVGTNILSSSVAMDKITTKRILESAGIAQVPYVAVIEGENIDDKIAE
                     IEGKLTYPVFVKPANMGSSVGISKAEDLAGLRKALDLAFKYDSRVLVEQGVNAREIEV
                     GLLGNADVKTTLPGEVVKDVAFYDYDAKYIDNKITMEIPAKIDESIMDIMRDNAAKAF
                     RAFGGCGLSRCDFFLTEDGDIFLNELNTMPGFTQWSMYPLLWDNMGLAYPDLIEELVR
                     LAKEMFEKRESHLI"
     gene            6370..6750
                     /locus_tag="U1041_002349"
     CDS             6370..6750
                     /locus_tag="U1041_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM4769414.1"
                     /translation="MYQTTVKGDGLFQAISQGYGEPVRTFGVTEKGETPVSLVNIGLA
                     SCLTMCVQGYYASQEGNKTMSVQVESRLDNQRFEVLIGIGESVSEQKQKEILAYVEKK
                     CKVKALLREDLKFETSFYVLESVE"
     gene            6752..7828
                     /locus_tag="U1041_002350"
     CDS             6752..7828
                     /locus_tag="U1041_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4769415.1"
                     /translation="MFLAIEEMRQNKLRYGLILGLLILISYLVFFLTGLAYGLMQENR
                     TAVDKWQADYVLLNSESNRLITASKIDTALLDQVDASDKALIRQQAGVAYVDENATSG
                     EKEKVNIFAVEADSFIVPNIVEGRLYEKTGEVLVDKTLSEVEGFGLGDQIYLSGSDEK
                     VTIVGYTDNAYFGVAPVVYMDFTVFAELMQADKQQAATSNLASAIVVRGDVASLPNEL
                     EKVAIADFIENLPGYKAQNMTFGFMIGFLIVISAIVIGIFIFVLTTQKSPIFGLMKIQ
                     GLSNSYISGSLLAQTFLLAGVGTVLGLAGTYLSSLVLPSAVPFENNWTFYIAIGLALV
                     VFALLGASFSVGSIFKVDPLRNLS"
     gene            7838..>8057
                     /locus_tag="U1041_002351"
     CDS             7838..>8057
                     /locus_tag="U1041_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4769416.1"
                     /translation="MKTLIFENISKTFQDGSQTITALKPTNFSIEEGEFVAIIGPSGS
                     GKSTFLTLAGGLQTPTTGRVLINQSDYSD"
BASE COUNT         2362 a         1413 c         1892 g         2390 t
ORIGIN      
        1 attttagtgg atgctggctt atcagggaaa aagattacca gtcttttggc ggaaatcgat
       61 cgaaagcctg aggatattga tgctatcctg gtaacgcatg aacatagcga tcacatccat
      121 ggtatcggtg ttctagcacg taagtatggc atggacattt atgccaatga attgacctgg
      181 caggctatgg agagcaaatt gggcaagatt gatgtggctc aaaaacatat cttcgaattg
      241 ggtgctatga agacttttgg cgacctagat attgagtcat ttggtgtcag tcatgatgcg
      301 gcctgtccgc aattttaccg ttttatgaag gatgacaaat cctttgttat gttgacggat
      361 acaggctatg tcagtgatcg aatggctggg attgtggcga atgcagatgc ctatttgatt
      421 gagtccaatc atgatgtcga aatcttgcgt gcgggttctt attcctggaa tcttaaacaa
      481 cggattttgt cggataaggg gcacctttgt aatgaagatg gagctgatgc catgattcgc
      541 tcgttgggaa atcggaccaa aaagatttac ctagggcatt tgtcaaagga aaacaatatc
      601 aaggaattag ctcacatgac catggttaat cagttggctc aggctgattt aggagttgga
      661 gtggatttcc aagtctatga cacatcgcca gatacagcga ctcccttgac caagatttga
      721 caaattcatt gaacttgttt agaataaata tataaaatac gtgaggtgaa gttacatgaa
      781 taattaagct acttattagt cgttcttaaa acttgtagga ggttgtatta accgataata
      841 cgagggataa gactgctcat aagggcttac tattcgtgtg actttttcca tagggaaagg
      901 tcatgttttg catggctttt ttctgtgttc attatagaag tggtgagccc ttttctaggt
      961 aagaaaagag gtctatatgg aaatgataaa atgtattcaa ttagagaagg aatttgcggg
     1021 acatagtttg tttacaatcc agcagttgag tcttcaagct ggtcaaaagg ttggtttggt
     1081 tggaaataat ggtgttggca agtctacttt tttgaaaatc ttactaggac tggataggga
     1141 ttttgtcggt caaattgagg taaaagcaga ctgggcctat gtaccccagt tacaggaaag
     1201 gagctcgctt tcaggtgggg aacaggtttg gaagtctatt caagaggctt ttgcccaaag
     1261 accgcagttg ttaatcctgg atgagccgac agctaatctg gaccaagaac accaggaaaa
     1321 gctaatcaaa caaatcaaac gctatcgagg tagtctacta gttgttagtc atgatcggca
     1381 ttttctcaat caaatagcca gtcacatttg gcatttagaa gaaggaagta ttcaggtcta
     1441 tacagggaat tatgaggcgt ttgtagaaag tcgccgggct aggcgagaag ggcagcagga
     1501 ggcctatgaa gcctatcaga aaaaagtcgc tcaactaaaa aaagcccaaa aagagcgtca
     1561 ggtcaaggct cagaagatgg ggaagagaaa gaaaggtgtt tcatcgtctg agtggaaagt
     1621 cagtgctatg atgggttcct atgatagtca atccaagtca atggctaagt ctgctaaaca
     1681 gttagagaaa aggattgaga ggttggaaaa ggtaagtcag cccagaaggg aggctcatat
     1741 taaaatggaa tcaaaaggtg ccttagatac tgatttacac agactatttc ttttgcaagc
     1801 aggtcaagtt ttgatggatg aagtgtatct atttgatttc cctcagatag ggatgacgtt
     1861 tggagagaag ttagccttag tgggggcgaa tggttctgga aagaccagtt ttgtccgaaa
     1921 attattaagg aaagaattgg caggctatta taatcctaag ttaaaaattg cttattttgc
     1981 acaggatttg ataaaccttg aagaagaaaa gactgctttt gaaaatatta gttgtacctc
     2041 tcttcaagat aagatgacga ttctcaattt attaggtatg ttaggacttt cttacgataa
     2101 ggctcagcag aaggtagcaa atctgtctgg tggtgagcgt gttcgtctct ccttagctaa
     2161 ggtattgttg gcggatgcaa atcttttgat attagatgaa ccgacaaatt ttctagatat
     2221 ggcagctatc gaagctttgg aaacattctt gaaagaatat gaaggaagtg tcctcttggt
     2281 ttcccatgat caacagtttg tggaaacatc tgttcacagt caatgggaga tagtgcaagc
     2341 ttgtctcgtg aagaaatcat aagaaaatat tttctgaaaa ggaggctctg tctaaaaaat
     2401 attttttgcc tgtggtataa taagaaggat atttctagaa tgaggtcttt gaagtgaaaa
     2461 aaagaaagaa caagcctttg gaacacgatg ggaattttat ttcccttcgt ttaaatattt
     2521 tattttctat cgtgattttc cttttcctag ttttgatatt gcgtttggca gatatgcaga
     2581 tcatcaatca tgatttttat agtaataagc tgtctactgc cagtcagaaa atcattagca
     2641 atggctctat ccgtgggcag atttacgatg cgcaaggaaa acctttggtt gaaaacgaga
     2701 ttcagcaggt tgtctccttc acacgttcca acaagatgtc tgctcaagaa atgaaagaag
     2761 tagctaacaa actcttgcag tgggtcaatg tgtcggacgt aacaattact caacgtgaca
     2821 aggctgatta ttatttggca gatgaagaag tttatcgtca ggtagtcgag gccttgtcag
     2881 aagataaaaa atacgattct gatggcaact acctgagtga atcgacaatt tattctaatg
     2941 cggttgatag tatccctgct gaagcattgc aatattctga gcaagacagc aaggcgattg
     3001 agctatttaa gcagatgaat ggagctactt acttctctac tgttaatttg gtaacagata
     3061 ctctaacagc tgaacaggtt gctcatatcg tagccaatga aagtcaactt ccaggcattt
     3121 caacgactaa caactggcaa cggacgattt taccaacttc cctcagctct attattggta
     3181 cagtaacgag tgaacaggct ggtttgcctg ctgaagatgc ggaatactat ctctccaagg
     3241 gctactcatc aaatgaccgt gtgggaactg cctacctcga gaaacaatat gaagaagtat
     3301 tgcaaggtca acgtgagaaa aaacaaatca atctagatcg aaatggaaat gtcgaaagta
     3361 ttgagacaat ccaagaagga cagcagggaa ataatattaa actgactatt gatttagcct
     3421 ttcaagatgg ggtcaatgct attttgaaaa aatactttga aagtgagctg gctactggta
     3481 gtgcacttta ctcggaagga gtttatgcag tcgcattgga accttcgaca ggtgcagtct
     3541 tggccatgtc tgggtatagt catgaaaaag gttcgggtga gattacagaa gatgccctcg
     3601 gtactattac aagtgttttc acaccaggtt ccatcgtcaa aggagcgaca atcagctctg
     3661 gttgggaaaa tggagttatc agtggcaatc aagtgcagtt agacgaacca atctattttg
     3721 caggttcagc accaattaca tcttggtggg cctatggtag ttttaatatt gatgcgacag
     3781 aggctctaga atattcttct aacgcctaca tggttaagat tgctttggga ctacttggtc
     3841 agacctactc agctaacatg tatttgaatg atggcgatac attgacaaat gccatgacta
     3901 agcttcgttc gacttttgca gaatatggtc ttggtgcttc tacagggatt gaccttccac
     3961 ttgaatctac tggtttttta cctgatgaat ataccacagc gaacttcatt accaacgcat
     4021 ttggtcagtt tgataactac acaccgatgc agatggcaca gtatgcagcg accattgcga
     4081 ataacgggac acggatttct ccacacctcg ttgagggaat ttatgggaat aatgcccaag
     4141 gtggtttggg agaattaatt gaaaccgtat ctggtaagga gatgaatcag gttaatattt
     4201 ccgctgagga aatgtctctt cttcgtcaag gtttctacca agttgtcaat ggtagtgggc
     4261 gctttaatac aggtagtgct atcggtcgtg gtgcggccgt gaccatcagt gccaagactg
     4321 gtagagccga aacctataca acgacagctt ctggtgatgt ggttactgcg gtcaatacca
     4381 acgttgttgc ttatgcgcct agtgataatc ctcaaattgc ggtagcagtt gtcctaccaa
     4441 acttgaccaa tcaaagttca acaactacta atacaattac tcaagaaatt atcaatctat
     4501 atcaatcact tcacccaatg aattaaggag gcttatgctt taccctacac ctattgccaa
     4561 gttaattgat agctattcta aattgccagg tatcggtata aaaacggcta cccgtttagc
     4621 tttttatact attggcatgg aggatgatgt cgttaatgaa tttgctaaaa atttattggc
     4681 agctaagcga gacctatctt attgctccgt ttgtggtaat ctgacagatc aggacccctg
     4741 tgccatttgc caggactcaa cgcgagacca atctactatt ttgattgtag aggatagtcg
     4801 agatgttaca gccttggaaa atattcaaga gtatcatggt ctctaccatg tcttgcatgg
     4861 cttgatttct cccatgaatg gtatcggacc agatgatatt aatttgaaaa ccctcctcac
     4921 tcgcctgatg gacaatgagg ttacagaagt tattgtggcg accaatgcaa cagcagatgg
     4981 agaggctaca tctatgtata tctcacgtgt cctcaaacct gcgggaatca aagtaacccg
     5041 actagctcgt ggcttagcgg taggcagtga tattgaatat gcagatgaag tgaccctgtt
     5101 gagggctatt gaaaatcgta cagagctata gcagttctgt agttagagac gttcctaatt
     5161 ttaagatagg atagatatga tttgttaaat tatgctatac taagagtaat agcgttggta
     5221 caggaaggaa aatatatgtc aaaagaaacc ttgattttac tatatggtgg gcgttctgca
     5281 gagcgtgagg tgtctgttct atctgccgaa agcgtcatgc gtgctatcaa ttatgataaa
     5341 ttttttgtca aaacctattt catcactcaa actggtgact ttgtaaagac gcaagagttt
     5401 tctcaaacac cgtctgccga tgaaaaactc atgacaaacg cgacgattgt tgaagagcaa
     5461 aaaatccgtc cgagcgatat ttatgaagaa aaggcggttg ttttccctgt tcttcatggc
     5521 ccaatgggag aagacggatc tattcaaggc ttcttggaag tgcttcgtat gccgtatgtt
     5581 ggtaccaata tcttgtcttc cagcgttgcc atggacaaga ttacaactaa gcgtattttg
     5641 gaatcagcag gtattgccca agtgccttat gtggccgtta tagagggtga aaatatcgac
     5701 gataagattg cagagattga aggaaaattg acttatccag tctttgtaaa accagctaat
     5761 atggggtcaa gtgtcggtat ctcaaaagct gaggatttag ctggcttgcg taaggcgctt
     5821 gatctggctt tcaagtatga tagccgtgtc cttgttgagc agggtgttaa tgcgcgtgag
     5881 attgaggttg gtcttttggg aaatgctgac gtgaaaacca cacttccagg tgaagtagtc
     5941 aaagacgttg ctttttatga ctacgatgcc aaatacatcg acaataagat tactatggaa
     6001 atcccagcta agattgacga atctatcatg gatatcatgc gtgataatgc tgccaaggct
     6061 ttccgtgctt tcggtggctg tggtctttct cgctgtgatt tcttcctaac tgaagacgga
     6121 gacatcttcc tcaatgagct caataccatg ccaggattta cccagtggtc tatgtatcca
     6181 ctcctttggg ataatatggg cttggcttac ccagacttga ttgaagagct tgttcgtttg
     6241 gccaaggaaa tgtttgaaaa acgcgaaagt cacctcattt aattattatc aagattggaa
     6301 tcattccaat cttttttctt gcaaaggttt gcaaaaagga ataaaatgga acaagttctg
     6361 gaggtgttta tgtatcaaac gacagtaaaa ggggacggtc tgtttcaagc tatctctcaa
     6421 ggctatggtg aaccagttcg tacctttggg gtgacggaga agggggaaac acctgttagt
     6481 ctagtgaata tcggcttggc atcctgtttg accatgtgtg tgcagggcta ttatgctagc
     6541 caagaaggca ataaaaccat gtctgttcag gtggagagtc gcttggacaa tcagcgtttt
     6601 gaggtgttga ttggaattgg tgagtcggtt tcggagcaga agcagaaaga gattcttgct
     6661 tatgtggaaa agaaatgtaa agtcaaagct cttttgaggg aagacttgaa gtttgagaca
     6721 agtttttatg tcttagaaag tgtggagtaa gatgttttta gcaattgaag aaatgcgaca
     6781 aaataagctg cgttatggct tgattttagg attattaatc ctgatttctt acttggtctt
     6841 tttcctgact ggtttggctt acggactcat gcaggaaaat agaacagcag ttgataaatg
     6901 gcaggcagat tatgtcttgc ttaattcaga aagcaatcgt ttgattacag catccaaaat
     6961 tgatacagcc ttgcttgacc aagtagatgc tagtgacaag gccttgattc gccaacaagc
     7021 tggagttgcc tatgtggatg aaaatgccac ctcaggcgaa aaagaaaagg taaacatctt
     7081 tgccgtagag gctgatagtt ttatcgtccc aaatattgta gaaggtcgtt tgtatgaaaa
     7141 aacgggagaa gtccttgtag acaaaacctt gtcagaggta gaaggttttg ggcttggaga
     7201 tcaaatctat ctatcaggtt ctgatgaaaa agtgaccatt gtaggttata cagacaatgc
     7261 ctactttgga gtggcgcctg ttgtatatat ggactttacg gtatttgcag aattgatgca
     7321 ggctgataaa caacaagctg caacgagtaa tcttgccagt gccattgtcg ttcgtggaga
     7381 tgtcgcttct ctaccaaatg agctggaaaa agttgctatt gcagacttta ttgaaaatct
     7441 gccaggatat aaggcacaaa atatgacctt tggctttatg ataggattct tgattgtcat
     7501 ctcagccatt gttattggta tttttatctt tgtgttgaca acacagaaat ctccgatttt
     7561 tggcttgatg aaaattcaag gtctttcaaa tagctatatt tcaggttctt tattggctca
     7621 aaccttccta cttgctggtg tgggaaccgt ccttggattg gctgggactt atttgtcatc
     7681 ccttgtcttg ccaagcgctg ttccatttga gaataactgg accttctata ttgcaatcgg
     7741 cctagcactg gttgtatttg ccctattggg tgctagtttc tctgtaggtt ctatctttaa
     7801 ggtagatcca ttacgaaatc tatcttagga ggttgttatg aaaacactta tttttgaaaa
     7861 tattagtaag accttccaag atggcagcca aactattacg gctcttaaac caacaaattt
     7921 tagcattgaa gaaggcgaat ttgttgccat cattggacca tctggttctg ggaagtcaac
     7981 atttttgacc ttggcaggtg gtttacaaac accgacaacg ggtcgtgttt taatcaatca
     8041 atcggactat tctgatt
//
LOCUS       DASFQS010000250         7587 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.099, whole genome shotgun sequence.
ACCESSION   DASFQS010000250 DASFQS010000000
VERSION     DASFQS010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7587
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.099"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            197..1111
                     /locus_tag="U1041_002352"
                     /pseudo
     CDS             197..1111
                     /locus_tag="U1041_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003030066.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1104..1538
                     /locus_tag="U1041_002353"
     CDS             1104..1538
                     /locus_tag="U1041_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013904098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769417.1"
                     /translation="MDKLHAEMERTVSKTIDNKLVDYQISLSDNFYTKYLSYYDCPYT
                     QEVVKSHRKFFQDLSYYAIYQKLGEVTKISIQARLSELDTLVDISDNKDEFDTFFYKK
                     FQFKLPEIPFEEEKLELSSFDLKLQQALNYNPKEDEGLRKRR"
     gene            1551..1835
                     /locus_tag="U1041_002354"
     CDS             1551..1835
                     /locus_tag="U1041_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4769418.1"
                     /translation="MDWFDYMIKASEQSRFNASHWFRYLRKVIFEDHSYLTDEDVEKL
                     LTSKELTDFQKVSLKYAIQEHTPTHDYVISLNKPAKLANVQKMMEKYKHG"
     gene            1828..2385
                     /locus_tag="U1041_002355"
     CDS             1828..2385
                     /locus_tag="U1041_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter peripheral membrane
                     component"
                     /protein_id="HEM4769419.1"
                     /translation="MDKMKPVFEALNQELSQANLRLTIICVGGYVLEYHGLRATQDVD
                     AFYEESQKINEIIARVGQRFNLNTDEELWLNNNVANMNKQPPLNLCETLYSFENLTVL
                     VAPIEYVLGMKMVSTREQDLKDIGAIIKYKHFRSPFNTFDGLKEMGFDSIDFSVLLEG
                     FSYAYGMDWLEEFFKENQDKLRRYY"
     gene            2499..3638
                     /locus_tag="U1041_002356"
     CDS             2499..3638
                     /locus_tag="U1041_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002415368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4769420.1"
                     /translation="MKEICHLAQVFHSTYKISVLIKDDKNINIALGNIEVDKNLFPID
                     YDMSQYWIEDLPGFRIGVHPLGAVRCTFESDDKAMYVQIGPVMVENINPLMIYQGSND
                     NEWTVLDIRKFSEICVMMYYFALDKNLSFSIESLVNKLVQFFSTDIMGLQTSELSKRT
                     IEQSYQDLRTRLELVQNGDITTLKQLNRDQDYLNALFEFCNNEQSTKSMLTFCLYLSM
                     YYAIAGGLPIEMSGAISSYYGNRFSSLRKREESVAMYNSILEHFALSTADYRVSGVSS
                     DIAKAVRMIKRNINRQLTIQSICTEIGLSQYHFMRKFKIDIGMTVGAYIKKEKIAYAK
                     FLLVYTNQSISEISEYLIFNSQSYFTSVFKKETGKTPFEYRKSDL"
     gene            3969..5936
                     /gene="optrA"
                     /locus_tag="U1041_002357"
     CDS             3969..5936
                     /gene="optrA"
                     /locus_tag="U1041_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002360182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein OptrA"
                     /protein_id="HEM4769421.1"
                     /translation="MSEATFAIASTNAKEDMKMQYKIINGAVYYDGNMVLENIGIEIN
                     DNEKIAIVGRNGCGKTTLLKAIIGEIELEEGTGESEFQVIKTGNPYISYLRQMPFEDE
                     SISMVDEVRTVFKTLIDMENKMKQLIDKMENQYDDKIINEYSDISERYMALGGLTYQK
                     EYETMIRSMGFTEADDKKPISEFSGGQRTKIAFIKILLTKPDILLLDEPTNHLDIETI
                     QWLESYLRSYKSTLVIISHDRMFLNRIVDKVYEIEWGETKCYKGNYSAFEEQKRENHI
                     KQQKDYDLQQIEIERITRLIERFRYKPTKAKMVQSKIKLLQRMQILNAPDQYDTKTYM
                     SKFQPRISSSRQVLSASELVIGYDTPLAKVNFNLERGQKLGIVGSNGIGKSTLLKTLM
                     GGVAALSGDFKFGYNVEISYFDQQLAQISGDDTLFEIFQSEYPELNDTEVRTALGSFQ
                     FSGDDVFRPVSSLSGGEKVRLTLCKLLYKRPNVLILDEPTNHMDIIGKENLENILCSY
                     QGTIIFVSHDRYFTNKIADRLLVFDKDGVEFVQSTYGEYEKKRMNSEKPFNNIKVEQK
                     VEKNNTVKGDRNSIEKEKVKKEKRIEKLEVLINQYDEELERLNKIISEPNNSSDYMVL
                     TEIQKSIDDVKRCQGNYFNEWEQLMRELEVM"
     gene            6866..7309
                     /locus_tag="U1041_002358"
     CDS             6866..7309
                     /locus_tag="U1041_002358"
                     /inference="COORDINATES: protein motif:HMM:NF038196.1"
                     /note="N-terminal region resembles flavodoxins. C-terminal
                     ferrodoxin region binds two 4Fe-4S clusters; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EFR1 family ferrodoxin"
                     /protein_id="HEM4769422.1"
                     /translation="MTILYFTATGNSLYVAKRLGGKLISIPQMIKENKYEFSDERIGI
                     VFPVFHVNIPPYIRDFLERSIFNCKYLFVIATYGEYAGSTADEVKKILDKRSIPANYI
                     NNIQMLDNFIPAFDMNEQRERDAIKNIEGQIDVVQEQSIQSLHSV"
     gene            complement(7263..7587)
                     /locus_tag="U1041_002359"
                     /pseudo
     CDS             complement(7263..7587)
                     /locus_tag="U1041_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001072197.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         2666 a         1073 c         1492 g         2356 t
ORIGIN      
        1 tgtgagctgt gagctgtgag ctgtgagctg tgagctgtga ttgcgttcat acaaatcaat
       61 tcctttgcta tttttataaa actattatat cacaaaaggt aatttctgaa aagaagtata
      121 tccatattta cactattttg ttgacttcta tgttttaaat gatataatgg ttttagaata
      181 tgaaaggagt agagagatgc taggtgaatt taagtcattg tacgatttga tgaatgcttt
      241 tccaaacgat tattactgtg agtgacattt agaaaaaatt cgttggaatg gctatgtggt
      301 cagtcctttt gatgaaacgt ctaaggttta taaatgcaag aatggtaaat atagatgtaa
      361 aaacagtggt aaatacttta atgttcggac tggtacaatg tttgataata ctaaagtctc
      421 ccttcaaaaa tggtttatag ctatctggct aatgacatct cataaaaagg gtatctcctc
      481 tctgcaacta tcaaaagaca tccacgttac acaaaaaacg gcttggttta tgctagagcg
      541 tattcgtaga tgtttcggtt cagaaaataa taatgaattg gacggaactg tagaagtaga
      601 tgaaacctac atcggtggta aaaataagaa tcgacataac tccaaaaaag ttaaaaatgc
      661 ccaaggtcgc tccctaaaag ataaaatccc agttgttggg atggttgcac gagaaggaaa
      721 attgaatgct cataaagtag ccgatacagg cacaaaaact ttaacagagc agattgtaaa
      781 atttgtgaaa gacactgctc aactttacac tgatgaatgg ttaggttata ataaagttgc
      841 gaaaatgtac gaccatgctt ttgtaaatca tggtgctcgt gaatatgtaa ttgatgatgt
      901 ttatacaaat acgattgaag gtttttgggc aggtctcaaa cgtggtgtac tgggaatcta
      961 ccattcttgg tctaagaaac atctacaaga ttatgtagat gagtttgtct tccgttataa
     1021 tacccgaagc atggctgaca acgaccgttt caatcttcta ttggcatctt cagaagttcg
     1081 tactacatac aaggagttag tccatggata aactacatgc agaaatggag cgaacagttt
     1141 ctaaaacaat tgataataag ctagtagatt atcaaatttc tctctctgat aatttttaca
     1201 ccaaatatct tagttactat gactgccctt atactcagga agtagttaaa tcacaccgaa
     1261 aatttttcca agacctatcc tattatgcga tttatcaaaa acttggagaa gtcacaaaaa
     1321 ttagcataca agctcgactt tctgagttag atactttagt agatatttca gacaataaag
     1381 atgaatttga tactttcttt tacaaaaagt ttcagtttaa actacctgag attccatttg
     1441 aggaagaaaa gctagaactt tccagttttg atttaaaatt gcaacaggct ctaaattata
     1501 atcctaaaga agatgagggg ctgagaaaaa gaagataagg aaggtgcaag atggattggt
     1561 ttgactacat gataaaggca tcagagcaat cacggtttaa tgctagtcat tggtttcgct
     1621 atttgcgaaa agttattttt gaagaccatt cttatttgac tgatgaagat gttgaaaaat
     1681 tattaacctc caaagaacta acagattttc aaaaggttag tttgaaatat gctattcaag
     1741 aacacacacc aactcatgat tatgtgattt cgttaaataa acctgccaaa ttagccaatg
     1801 tacaaaaaat gatggagaaa tataagcatg gataaaatga aacctgtttt tgaagccttg
     1861 aatcaagagt tatctcaagc caatcttcgt ttaaccatca tttgtgtagg tggttatgtc
     1921 ctagaatacc acggtttgcg agctacacaa gatgtggatg ctttttatga agaaagtcag
     1981 aaaatcaacg aaattatcgc tcgtgtaggg caacgcttta atttgaatac tgacgaagaa
     2041 ctatggctca ataacaatgt ggcgaatatg aacaaacagc caccattgaa tttatgtgag
     2101 accctatatt catttgaaaa tctaactgtt ttagttgctc caattgaata cgtattgggt
     2161 atgaaaatgg ttagtacaag agagcaggat ttgaaagata ttggagcaat tatcaaatac
     2221 aaacacttcc gttctccgtt taataccttt gatggtttga aagaaatggg atttgatagc
     2281 attgatttct ccgttctcct agaaggcttc agttatgcct atggcatgga ctggttagaa
     2341 gaatttttca aagaaaatca ggataaactg agaagatatt attgatagtc aagatagaag
     2401 aaaagacaat ttcctagttt ggaagtcgcc ttttttgcat attctcggaa acactacata
     2461 tcgtggttgg tgtaaacaga tatatagttc cctaaagaat aaaagaaatc tgccatctcg
     2521 cacaggtatt tcactcaacc tataaaattt cagttctaat aaaagatgac aagaatataa
     2581 acatagctct tggtaatatt gaagttgaca agaatttgtt tcctattgat tatgatatga
     2641 gccaatattg gattgaagat ttaccaggat tcagaatcgg agttcatcct cttggtgctg
     2701 tccgatgcac atttgaatct gatgataaag caatgtacgt tcagattggt ccagtgatgg
     2761 tagagaacat taacccattg atgatttatc agggaagcaa tgacaatgaa tggactgtgc
     2821 tcgatatcag aaagtttagt gaaatatgtg tgatgatgta ttactttgca ttagataaga
     2881 atttatcttt ttctattgag agtttagtga ataaactggt acaatttttt tcgactgata
     2941 tcatgggact acaaacgtct gagctttcaa agcggacgat tgaacaaagt tatcaggact
     3001 tacgaacaag acttgagctt gtccaaaatg gtgatataac tacacttaaa cagctgaacc
     3061 gggatcaaga ttaccttaat gcactttttg aattttgtaa taatgaacaa tcaacaaaat
     3121 ccatgctgac attctgtctg tatctatcga tgtactatgc tattgctggc ggtcttccta
     3181 ttgaaatgtc aggtgcaatc agtagctatt acggaaatcg ctttagttct ctgagaaaaa
     3241 gagaagagtc cgttgctatg tataacagta ttttggagca tttcgcttta agtactgcag
     3301 attatagagt atctggtgtc tcttcagaca tagcaaaagc agtcaggatg attaaaagaa
     3361 atatcaaccg tcagctcacc attcagtcaa tatgcacaga aattggtcta agtcagtatc
     3421 acttcatgcg taaattcaag atagatatag gtatgactgt tggtgcatac attaagaagg
     3481 agaaaatagc atatgccaaa tttctattgg tatatacgaa tcagtcaata tcagaaatta
     3541 gtgaatatct tatatttaac tcacaaagtt acttcacatc cgtgtttaaa aaagaaacag
     3601 gaaaaacgcc ttttgaatat agaaagagtg atttgtaaag ctgatggcta atgcaaagaa
     3661 tcaattgcgg caatcctttt gtatcttttt ccagtgtggc tgcggtttct gttgacggga
     3721 acagcagggc atatgcggaa tctggtgtcg gatgagataa cggatcagtt actttgtttt
     3781 tatcagaaaa ggtgtaagct aaaacttagg ttagccattg cgctagcgat ttggtacaat
     3841 aagggggaag ttgaattata tttgaaacga taggagggag aagcaaatga aatctacaac
     3901 taaagtaaca tttaaagaac ttcatgtata ggtggctgtg acaagcttta catggagtgg
     3961 aataattatt gtccgaagcc acctttgcaa ttgctagtac taacgcaaag gaggatatga
     4021 aaatgcaata caaaataatt aatggtgccg tttactatga tggtaatatg gtgttggaaa
     4081 acatcggtat tgaaatcaat gataatgaaa agattgctat tgttggtaga aatggatgtg
     4141 gaaaaacaac cttgctaaaa gctattatag gcgaaattga attagaagaa ggaactggtg
     4201 aaagtgagtt tcaagtaata aagaccggta acccttatat tagctattta agacagatgc
     4261 cttttgaaga tgaaagtata tcaatggtgg atgaagtccg tacggtattt aagacgctta
     4321 ttgatatgga aaacaagatg aaacagctga tagataaaat ggagaatcaa tatgatgata
     4381 aaatcatcaa tgaatactct gatatcagtg aaaggtatat ggctcttgga ggtctaacct
     4441 accaaaaaga atatgaaacg atgattcgta gtatgggttt tactgaagca gatgataaaa
     4501 aacccatttc tgaattttca ggtggtcagc gaactaagat agcttttata aaaatacttt
     4561 taacaaagcc agacattcta ttacttgatg aacctactaa ccaccttgat atagaaacaa
     4621 tacaatggtt ggagagttat ttgagaagtt ataaatctac attggttatt atttcccatg
     4681 atagaatgtt tcttaatcga attgtggata aggtttatga aatcgaatgg ggagagacca
     4741 aatgttataa aggtaattat tcagcctttg aggagcaaaa acgagaaaat catatcaaac
     4801 agcaaaaaga ttacgatttg caacagatag aaattgaaag gattacacgc ttgattgaac
     4861 gttttcgtta taaacctacg aaagctaaaa tggtgcaatc taaaattaaa ttattacagc
     4921 gtatgcaaat attaaatgca ccagaccaat acgatacaaa aacttatatg tctaaatttc
     4981 aaccgagaat cagtagttca aggcaagtat taagtgcttc agaacttgtg ataggctatg
     5041 atactcctct tgcaaaggtt aatttcaacc ttgaaagggg acagaagctt ggaattgttg
     5101 ggagtaatgg tattggtaaa tccacgttgc ttaaaacact tatgggtggt gtggcagcat
     5161 tgtctggaga ttttaaattc ggatacaatg ttgaaattag ctattttgac caacagcttg
     5221 ctcaaatcag tggagatgat acactattcg aaatttttca aagcgaatac cctgagctaa
     5281 atgacacaga ggtcagaact gctcttggct catttcagtt tagtggagat gatgttttta
     5341 gaccggtgtc ctctttgtca ggtggagaaa aggttagatt gacattatgt aaattattat
     5401 ataaacgtcc taatgtttta atcttagatg aaccgacaaa ccacatggat attattggaa
     5461 aagagaattt agagaatatc ttatgcagtt atcaaggtac aattattttt gtgtcacatg
     5521 atagatattt tactaataag attgctgaca gattacttgt ttttgataag gatggtgtag
     5581 agtttgtaca atctacttat ggtgagtacg agaaaaaaag gatgaattct gaaaagccat
     5641 ttaataacat taaagttgag cagaaagtag agaaaaataa cacagtaaaa ggcgatcgta
     5701 actccattga gaaggagaag gttaagaagg agaaacgaat tgaaaagctt gaagtgttaa
     5761 taaatcaata tgatgaagaa ttagaaagat tgaataaaat catttctgaa ccaaacaatt
     5821 cttctgatta tatggtactg acggaaatac aaaaatcaat tgatgatgtt aaaaggtgtc
     5881 agggtaatta ttttaatgaa tgggaacagt tgatgagaga attggaagtt atgtaatttt
     5941 tgagttatgc aataaggatg taaaagtgtt aatgatacat tctggttgtt gaaaatgtaa
     6001 aaaaattaat gaatttttat tagatataat cgctatgtga agaccttttg agtttgccgc
     6061 atagcggttt ttattatcta tactttggaa ttgtcaagaa aagtgtagtc gtataaactc
     6121 actaaatttc ctttgattgt tatgctgcca gaagttgttc ttccagtagc cctctgtata
     6181 taacaggagg attgagcagg tggtttctgt cgttgcagaa ccagattcta aatatgggac
     6241 tgaagtattt gatgaatatg tcataagtaa agaatttgaa aatgttcaag aggttatgac
     6301 gtctcaaata cagcagaaag gaaggttaag ataagagaaa ctgaagttca acaatagtat
     6361 ttagatatag ggtgataaat cagattatat tgtgatttgt agaattgctt gccttggtgc
     6421 taaataggta tggtaataat gtactaatcg attgttttgt agtaaaaaag caacagataa
     6481 ttaggatatt tttcttgtat tgttcgttaa aaagagccaa acgaagtata ttttctcata
     6541 gaagttgaac atagtagact gattattgcc actgtaaaaa atgaggaatg tatcctgtgt
     6601 tacagttatt ccattaatga gagatgagga taaagataga tttgtacagg gaattgagaa
     6661 atttaacgtt taaacaaaat ctagttcatc ctttacacta tccgttggga tagtatacgt
     6721 cacaaatgtg cgtacttaca ttttgaattt tcttaagtat aatactcatt atgatgacac
     6781 ctagataaca attcaaaccc gatgcaagtg taactgcatc aaaaatcaat tttgaatcct
     6841 aattagttaa agagaggtag cagaaatgac aattttgtat tttaccgcaa caggaaacag
     6901 tctttatgtt gcgaaaagac ttggtggaaa actaatatcc atcccacaaa tgataaaaga
     6961 gaataaatat gagttctcag acgagaggat aggtattgta ttcccggttt ttcacgttaa
     7021 tatcccgcca tatattagag attttttaga acgctctatt tttaattgca aatatctatt
     7081 tgttattgca acatatggag aatatgcagg ttcaactgca gatgaagtga aaaagatttt
     7141 agacaaacgt tcaataccag ccaattatat aaataatata caaatgctcg ataattttat
     7201 tcctgctttt gatatgaacg aacaaagaga acgagatgct attaaaaata tcgaaggtca
     7261 aattgatgtc gttcaagaac aatcaataca gagtctacat tcggtttagg gtgaaaatat
     7321 gctcgtggca cttttttgag aactcttatg tccaattcca ccatcaatag caaacctaaa
     7381 gctcgtttcg tattttgtaa tctttttgca aaaccattct ccacaataag gtaactatat
     7441 ttcgaattgc tttcaaaagc aatttttttg acaatatcag tactgatgtt aaaggggata
     7501 ttaccaaata ttttatagtc tttgtttttg gggaagttaa atttcagggt tctgttgcaa
     7561 agttttaaat aaagaataaa atccctt
//
LOCUS       DASFQS010000251         1719 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.183, whole genome shotgun sequence.
ACCESSION   DASFQS010000251 DASFQS010000000
VERSION     DASFQS010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.183"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            73..324
                     /locus_tag="U1041_002360"
                     /pseudo
     CDS             73..324
                     /locus_tag="U1041_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627290.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            417..1211
                     /locus_tag="U1041_002361"
                     /note="aph(3')-IIIa"
     CDS             417..1211
                     /locus_tag="U1041_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase
                     APH(3')-IIIa"
                     /protein_id="HEM4769423.1"
                     /translation="MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLK
                     MTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY
                     EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE
                     EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKW
                     YDIAFCVRSIREDIGEEQYVELFFDLLGIKPDWEKIKYYILLDELF"
     gene            1621..1704
                     /locus_tag="U1041_002362"
                     /pseudo
     CDS             1621..1704
                     /locus_tag="U1041_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000527320.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
BASE COUNT          546 a          271 c          393 g          509 t
ORIGIN      
        1 accttatttg atagtagatt taaaactttg caacagaacc tattgacaat actgataaga
       61 taatatatct tttatataga agatatcgcc gtatgtaagg atttcagggg gcaaggcata
      121 ggcagcgcgc ttatcaatat atctatagaa tgggcaaagc ataaaaactt gcatggacta
      181 atgcttgaaa cccaggacaa taaccttata gcttgtaaat tctatcataa ttgtggtttc
      241 aaaatcggct ccgtcgatac tatgttatac gccaactttg aaaacaactt tgaaaaagct
      301 gttttctggt atttaaggtt ttagaatgca aggaacagtg aattggagtt cgtcttgtta
      361 taattagctt cttggggtat ctttaaatac tgtagaaaag aggaaggaaa taataaatgg
      421 ctaaaatgag aatatcaccg gaattgaaaa aactgatcga aaaataccgc tgcgtaaaag
      481 atacggaagg aatgtctcct gctaaggtat ataagctggt gggagaaaat gaaaacctat
      541 atttaaaaat gacggacagc cggtataaag ggaccaccta tgatgtggaa cgggaaaagg
      601 acatgatgct atggctggaa ggaaagctgc ctgttccaaa ggtcctgcac tttgaacggc
      661 atgatggctg gagcaatctg ctcatgagtg aggccgatgg cgtcctttgc tcggaagagt
      721 atgaagatga acaaagccct gaaaagatta tcgagctgta tgcggagtgc atcaggctct
      781 ttcactccat cgacatatcg gattgtccct atacgaatag cttagacagc cgcttagccg
      841 aattggatta cttactgaat aacgatctgg ccgatgtgga ttgcgaaaac tgggaagaag
      901 acactccatt taaagatccg cgcgagctgt atgatttttt aaagacggaa aagcccgaag
      961 aggaacttgt cttttcccac ggcgacctgg gagacagcaa catctttgtg aaagatggca
     1021 aagtaagtgg ctttattgat cttgggagaa gcggcagggc ggacaagtgg tatgacattg
     1081 ccttctgcgt ccggtcgatc agggaggata tcggggaaga acagtatgtc gagctatttt
     1141 ttgacttact ggggatcaag cctgattggg agaaaataaa atattatatt ttactggatg
     1201 aattgtttta gtacctagat ttagatgtct aaaaagcttt aactacaagc tttttagaca
     1261 tctaatcttt tctgaagtac atccgcaact gtccatactc tgatgtttta tatcttttct
     1321 aaaagttcgc tagatagggg tcccgagcgc ctacgaggaa tttgtatcga taagaaatag
     1381 atttaaaaat ttcgctgtta ttttgtacat ttaacttgac ggtgacatct ctctattgtg
     1441 agttattagt ggtacagttt tcaaccgttt taattataaa aaagtggtgc atttttaaat
     1501 tggcacaaac aggtaacggt tattgcaggt gtatttctta tctatgggtt taacatggat
     1561 tttatcatta aaatcatgag tattgtccga gagtgattgg tcttgcgtat ggttaaccct
     1621 aaagttatgg aaataagact tagaagcaaa cttaagagtg tgttgatagt gcagtatctt
     1681 aaaattttgt ataataggaa ttgaagttaa attagatgc
//
LOCUS       DASFQS010000252         1558 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.189, whole genome shotgun sequence.
ACCESSION   DASFQS010000252 DASFQS010000000
VERSION     DASFQS010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.189"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            60..863
                     /gene="lnu(B)"
                     /locus_tag="U1041_002363"
     CDS             60..863
                     /gene="lnu(B)"
                     /locus_tag="U1041_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002294514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lincosamide nucleotidyltransferase Lnu(B)"
                     /protein_id="HEM4769424.1"
                     /translation="MLKQKELIANVKNLTESDERITACMMYGSFTKGEGDQYSDIEFY
                     IFLKDSITSNFDSSNWLFDVAQYLMLYKNEYGTEVVIFDNLIRGEFHFLSEKDMNIIP
                     SFKDSGYIPDMKDMLIYDETGQLENYLLEISGARPNRLTEENANFLLCDFSNLWLMGI
                     NVLKRGEYARSLELLSQLQKNILQLIRMVEKNADNWLNMSKNLEKEISLENYKKFAKT
                     TARLDKVELFEAYKNSLLLVIDLRSHLLEQYNLKVTHDILERLLNYISE"
     gene            complement(1048..1305)
                     /locus_tag="U1041_002364"
                     /pseudo
     CDS             complement(1048..1305)
                     /locus_tag="U1041_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006149971.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
BASE COUNT          529 a          244 c          288 g          497 t
ORIGIN      
        1 ctatagagat tttgagttgc cacaataact aaaagatatt tagatgaaag ggtgaagaaa
       61 tgttaaaaca aaaagaatta attgcaaatg ttaagaatct tactgagtca gatgaacgaa
      121 ttacagcttg tatgatgtat ggatcgttta ccaaaggaga aggtgaccaa tactcggata
      181 tagagttcta tatatttttg aaagatagca taacctcgaa ctttgattca tccaactggt
      241 tgtttgacgt agctcagtac ttgatgcttt ataaaaatga gtatggaaca gaggtagtta
      301 tttttgataa tcttatacgt ggggaatttc atttcctttc tgaaaaagat atgaacataa
      361 tcccctcgtt taaagattca ggttatattc ctgatatgaa ggatatgctt atttacgatg
      421 aaacagggca attagaaaat tatttattag agataagtgg tgcaagacca aatagactta
      481 ctgaagaaaa tgctaatttc ttgttgtgtg atttctctaa tctatggttg atgggaatca
      541 atgttctaaa aagaggagaa tatgctcgtt ctttagaact cttatcacag cttcaaaaaa
      601 atatactaca acttatacgt atggtagaaa aaaatgcgga taattggcta aatatgagta
      661 agaaccttga aaaagaaatt agccttgaaa attataaaaa gtttgcaaag accactgctc
      721 gattagataa ggtagaatta tttgaagcct ataaaaattc cttactgtta gttatagatt
      781 tgcgaagtca ccttcttgaa caatacaact taaaagttac acatgatatt ttagaaagat
      841 tgttgaatta cattagtgaa tagaagagta acgttattta gagcattggt tactaagaat
      901 taacagtata cctcggtttt caaaaaacag cgaagtctat ggatatgttc ccacatacgc
      961 aagccctcag tggatatctt ccctcaaaga caataatgtt caagtgacta atttttgaca
     1021 gctatcccct catctcaaaa cattttgata gctgaatttt cgagtgttaa tgtcaaatgg
     1081 taagtcgtag gaacggccta cgttcgcttt gccgaatact ttcttaaaca taggggatga
     1141 agcgagtatt aatcctgctg agttatccgc tcggctcatg acgcatagtg atgtgtagag
     1201 cggatgcagt cctctatcca cacattcaac agaagcgtaa aaggacttca tatcgaggaa
     1261 agctatgtca ctttgaggtt ctatagaata gtcgatatag cccataaggt tatctccgtt
     1321 tgagtttctc tagctcttct attaactcac cgatgtaatc agtaatgtcg tattcgaatt
     1381 tgtcgggagt aaagataata cgttcgtcct ttatgtaaat catttcttta acgttcattg
     1441 gtattgtcat cctcctcggt catagcaatc aaaatagaat cctctatcaa aaaagcaaaa
     1501 ggatagattt ttgcattctc attttgagga ataagaattt catcgaatcc ttcattct
//
LOCUS       DASFQS010000253         1536 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.192, whole genome shotgun sequence.
ACCESSION   DASFQS010000253 DASFQS010000000
VERSION     DASFQS010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.192"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            31..1515
                     /gene="lsa(E)"
                     /locus_tag="U1041_002365"
                     /gene_synonym="lsaE"
     CDS             31..1515
                     /gene="lsa(E)"
                     /locus_tag="U1041_002365"
                     /gene_synonym="lsaE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002294513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein Lsa(E)"
                     /protein_id="HEM4769425.1"
                     /translation="MSLINVSNLTFSYEGSYDNIFENVSFQIDTDWKLGFIGRNGRGK
                     TTFLNLLLGKYAYSGNISSTVKFECFPYDVEDKSLYTIEVMKSICTECMDWEIFREIS
                     LLDVQEDVLYRPFNTLSNGEQTKVLLASLFLTTSCFLLIDEPTNHLDLDARNVVQNYL
                     KRKKGFILVSHDRSLLDQCVDHILSINKTNIEIQKGNFTSWWENKALQDNFELAENKK
                     LLKEIGRLSYAAKRSSNWSNKVEKSKYGTTNSGSKLDKGYVGHKAAKAMKRAKNIESR
                     HQEAVSQKSELLHNIEQYDDLKISPLEFHKECLIEANDLSLSYGDKEVCSNLNFRINI
                     GDRVAIIGKNGSGKSSILKLINGDDIKFTGNFILASGLKISYISQDTSYLKGNLSEFA
                     YNNKIDETLFKTILRKLDFNREQFDKNVEDFSAGQKKKVLIAKSLCESAHLYIWDEPL
                     NYIDIFSRIQIEKMILEYCPTLLFVEHDDAFCNNICTKNINLCL"
BASE COUNT          549 a          202 c          293 g          492 t
ORIGIN      
        1 atttttataa tgtaaaggag gaagaaatac atgtctttaa taaatgtttc aaatctaact
       61 ttttcatatg aaggaagtta tgacaatatt tttgaaaatg taagttttca gatagataca
      121 gattggaaac tcggttttat tggaagaaac ggacgcggaa aaactacttt cttaaattta
      181 ttgcttggca aatatgcgta ttccggcaat ataagttcta cagttaagtt tgagtgtttt
      241 ccttacgatg tggaagataa gagtctatat acaattgaag taatgaagag tatttgtacg
      301 gaatgtatgg attgggagat ttttcgtgaa atatcattgc ttgatgttca agaagatgtt
      361 ttatatcgtc cgtttaatac actgtcaaat ggtgagcaga caaaggtcct tcttgcatct
      421 ttattcctta caacgagttg tttcctgctt attgatgaac ctacaaacca tcttgacctc
      481 gatgcacgta atgtagtgca aaactatttg aaacgcaaga aggggtttat tttggtatct
      541 catgatagga gtctacttga tcaatgtgtt gaccatatac tatctatcaa taaaacgaat
      601 atcgaaatcc aaaaaggaaa ctttacttct tggtgggaaa acaaagcgtt acaagataat
      661 tttgaactgg cggaaaacaa gaaactcctt aaagaaatag gaaggttgtc ttatgcagca
      721 aaacgtagtt caaattggtc aaataaagta gaaaaaagta aatatggaac aacaaattct
      781 ggctcaaaac tggataaggg ctatgttgga cataaagctg caaaagcgat gaaacgtgcc
      841 aaaaatattg agtcaagaca tcaggaagct gtttcacaaa aatcagagct gctccacaat
      901 atcgaacaat atgacgactt aaaaatttcg ccacttgaat ttcacaaaga gtgcctaata
      961 gaagcgaatg atttatcatt gtcttatgga gataaagaag tatgcagtaa tcttaatttc
     1021 agaatcaata ttggtgatag agttgccatt atcggaaaaa atgggagtgg taagtctagt
     1081 atcctaaaat tgattaatgg agatgatatt aaatttaccg gaaattttat tttagcaagt
     1141 ggactaaaaa tttcttatat ttcgcaagat acttcatatt taaaaggtaa tctatctgag
     1201 tttgcctata ataataagat tgacgaaact ttatttaaaa cgattcttcg taaactggat
     1261 tttaatagag aacagtttga taagaacgtg gaggatttta gtgctggtca gaaaaagaaa
     1321 gtactaattg ctaaaagcct gtgtgaaagt gcacatttgt atatatggga tgagccattg
     1381 aactatattg atattttttc acgtatccaa attgaaaaaa tgattttaga atattgtcct
     1441 acactattgt ttgtggagca tgatgatgct ttttgcaata atatttgtac gaaaaatatc
     1501 aatttatgtc tatagagatt ttgagttgcc acaata
//
LOCUS       DASFQS010000254         1456 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.195, whole genome shotgun sequence.
ACCESSION   DASFQS010000254 DASFQS010000000
VERSION     DASFQS010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.195"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            65..841
                     /locus_tag="U1041_002366"
     CDS             65..841
                     /locus_tag="U1041_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002578722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(9) family aminoglycoside
                     nucleotidyltransferase"
                     /protein_id="HEM4769426.1"
                     /translation="MNINEFPQQVNQVISIAETILQGQILGIYLYGSATMNGLRPDSD
                     IDILIITKQELSNSIRADLTKQLLKISGSVGCIEKRPLEVTIINQSDIVPLQFPPKCQ
                     YMYGEWLRGEMEAGEYPQACNDPDIMILLWQARKNSITLKGAESKELIPAIPFHEIKK
                     AIRFSLPGLISSFKGDERNVLLTLSRMWFTLVTEEITTKDVAAKWVILKLPERFPPLL
                     TTAKEAYLGNLSDEWETVEKEAMALVEYMKKQIEELLRTE"
     gene            1041..>1456
                     /locus_tag="U1041_002367"
     CDS             1041..>1456
                     /locus_tag="U1041_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002578721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4769427.1"
                     /translation="MNQGRIIVITGSPGTGKTTTASIVAKESNMDKSVHMHTDDFFHY
                     LSKGAIPPHLPESNEQNLVVIEAFLEAAKRYARGGYDVIVDGIVGPWFLEPWLNIVQE
                     HYKVHYIVLRASKEETMKRAIERSKLDRETNIELVET"
BASE COUNT          517 a          241 c          323 g          375 t
ORIGIN      
        1 taaaaatggc tatttatcaa ctgtttgttg tgacatagcc aaataaatac atataggagt
       61 tacaatgaat ataaatgaat ttccacaaca agtaaatcaa gttatttcaa tagcagaaac
      121 catattacaa ggtcaaatat tggggatata tttatatggt tcagcaacaa tgaatgggct
      181 gcgtccagat agtgatatag atatactgat aattactaag caagaattga gtaattcaat
      241 cagagcagat ctaacaaagc aattattgaa aatttctggc tccgtaggct gtattgaaaa
      301 aagaccttta gaggtaacta ttatcaatca atctgatatt gttccgttgc aatttccgcc
      361 aaaatgtcag tatatgtatg gtgaatggct aaggggagag atggaagcag gagaatatcc
      421 gcaagcctgc aatgacccag atataatgat tttattatgg caagcaagaa aaaatagcat
      481 aactttgaag ggggcggaaa gcaaagagct tattcccgct atcccatttc acgaaattaa
      541 aaaagcaatt cggttttctt tacctggttt gatttccagc tttaagggtg atgaaagaaa
      601 tgtgttatta accttatcac gaatgtggtt tactttagta acagaagaaa tcacgacaaa
      661 agatgttgcc gcaaaatggg taattttaaa attgccggag agatttcccc ccctgctaac
      721 aacggcaaag gaagcttatt tgggaaattt gtctgatgaa tgggagacag tagaaaagga
      781 agcgatggca cttgtagaat atatgaaaaa acaaattgag gaattactta gaacagagta
      841 gcaaagttag cggggccaat caacggtcaa gatgaacggc gcataaatgc gccgccgttg
      901 acagtcccgc ccgtctttgc tgatgggcaa tcaaggcggg aaagccctaa aatggcttcc
      961 cgcccatttc aatcttgaga gaagaaacgc tccaaaatca gaaagagagc ggtaaatctg
     1021 aattgcgagg gagaatgtag atgaatcaag gaagaattat tgtgattaca ggttcgccgg
     1081 gaacaggaaa gacaacaact gcgtcgattg tcgcaaaaga atcgaacatg gataaatctg
     1141 tgcatatgca cacagacgac ttttttcatt atttaagcaa aggagcaata ccgccgcatt
     1201 taccagagtc caacgaacaa aatttagttg tcattgaagc ctttttagaa gctgcaaagc
     1261 gctatgcccg cggcggatat gatgtaattg tagatggaat tgtaggaccg tggtttttag
     1321 agccgtggct caacattgtt caagagcatt ataaagtaca ctatatcgtt ttaagggcaa
     1381 gtaaagaaga aaccatgaag cgagctatcg aacgctcaaa gttagataga gaaacaaata
     1441 ttgaattagt tgaaac
//
LOCUS       DASFQS010000255          911 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.216, whole genome shotgun sequence.
ACCESSION   DASFQS010000255 DASFQS010000000
VERSION     DASFQS010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.216"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            157..894
                     /gene="erm(B)"
                     /locus_tag="U1041_002368"
     CDS             157..894
                     /gene="erm(B)"
                     /locus_tag="U1041_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(B)"
                     /protein_id="HEM4769428.1"
                     /translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLT
                     TKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIP
                     YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAE
                     CFQPKPKVNSALIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKYA
                     KVNDLSTVTYEQVLSIFNSYLLFNGRK"
BASE COUNT          345 a          156 c          136 g          274 t
ORIGIN      
        1 agactaaaaa cagtgattac gcagataaat aaatacgtta gattaattcc taccagtgac
       61 taatcttatg actttttaaa cagataacta aaattacaaa caaatcgttt aacttctgta
      121 tttgtttata gatgtaatca cttcaggagt gataacatga acaaaaatat aaaatattct
      181 caaaactttt taacgagtga aaaagtactc aaccaaataa taaaacaatt gaatttaaaa
      241 gaaaccgata ccgtttacga aattggaaca ggtaaagggc atttaacgac gaaactggct
      301 aaaataagta aacaggtaac gtctattgaa ttagacagtc atctattcaa cttatcgtca
      361 gaaaaattaa aactgaatac tcgtgtcact ttaattcacc aagatattct acagtttcaa
      421 ttccctaaca aacagaggta taaaattgtt gggaatattc cttaccattt aagcacacaa
      481 attattaaaa aagtggtttt tgaaagccgt gcgtctgaca tctatctgat tgttgaagaa
      541 ggattctaca agcgtacctt ggatattcac cgaacactag ggttgctctt gcacactcaa
      601 gtctcgatta agcaattgct taagctgcca gctgaatgct ttcaacctaa accaaaagta
      661 aacagtgcct taataaaact tacccgccat accacagatg ttccagataa atattggaaa
      721 ctatatacgt actttgtttc aaaatgggtc aatcgagaat atcgtcaact gtttactaaa
      781 aatcagtttc atcaagcaat gaaatacgcc aaagtaaacg atttaagtac cgttacttat
      841 gagcaagtat tgtctatttt taatagttat ctattattta acgggaggaa ataattctat
      901 gagtcgcttt t
//
LOCUS       DASFQS010000256          911 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 94-2044
            SAMN09459742-rid19047493.guided.217, whole genome shotgun sequence.
ACCESSION   DASFQS010000256 DASFQS010000000
VERSION     DASFQS010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459742
            Sequence Read Archive: SRR7369683
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847160.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847160.1
            Genome Coverage       :: 36x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/12/2023 01:04:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,369
            CDSs (total)                      :: 2,335
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 18 of 59
            Pseudo Genes (incomplete)         :: 38 of 59
            Pseudo Genes (internal stop)      :: 12 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459742-rid19047493.guided.217"
                     /isolate="94-2044"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2014"
     gene            157..894
                     /gene="erm(B)"
                     /locus_tag="U1041_002369"
     CDS             157..894
                     /gene="erm(B)"
                     /locus_tag="U1041_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(B)"
                     /protein_id="HEM4769429.1"
                     /translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLT
                     TKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIP
                     YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAE
                     CFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHA
                     KVNNLSTVTYEQVLSIFNSYLLFNGRK"
BASE COUNT          343 a          157 c          137 g          274 t
ORIGIN      
        1 agactaaaaa cagtgattac gcagataaat aaatacgtta gattaattcc taccagtgac
       61 taatcttatg actttttaaa cagataacta aaattacaaa caaatcgttt aacttctgta
      121 tttgtttata gatgtaatca cttcaggagt gataacatga acaaaaatat aaaatattct
      181 caaaactttt taacgagtga aaaagtactc aaccaaataa taaaacaatt gaatttaaaa
      241 gaaaccgata ccgtttacga aattggaaca ggtaaagggc atttaacgac gaaactggct
      301 aaaataagta aacaggtaac gtctattgaa ttagacagtc atctattcaa cttatcgtca
      361 gaaaaattaa aactgaatac tcgtgtcact ttaattcacc aagatattct acagtttcaa
      421 ttccctaaca aacagaggta taaaattgtt gggaatattc cttaccattt aagcacacaa
      481 attattaaaa aagtggtttt tgaaagccgt gcgtctgaca tctatctgat tgttgaagaa
      541 ggattctaca agcgtacctt ggatattcac cgaacactag ggttgctctt gcacactcaa
      601 gtctcgattc agcaattgct taagctgcca gcggaatgct ttcatcctaa accaaaagta
      661 aacagtgtct taataaaact tacccgccat accacagatg ttccagataa atattggaag
      721 ctatatacgt actttgtttc aaaatgggtc aatcgagaat atcgtcaact gtttactaaa
      781 aatcagtttc atcaagcaat gaaacacgcc aaagtaaaca atttaagtac cgttacttat
      841 gagcaagtat tgtctatttt taatagttat ctattattta acgggaggaa ataattctat
      901 gagtcgcttt t
//
